BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 036461
         (369 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  404 bits (1039), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 196/368 (53%), Positives = 257/368 (69%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G  PNV TY TL+NGLC TG+T++A+ L EEM NGNG FGV  KPN V
Sbjct: 180 EATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLV 239

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LCK+G +DK KELFL+MK   I+P+VV Y+S+IHG C+   W  AK LF EM
Sbjct: 240 CYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEM 299

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV PNVV+FNV+++ LCK GKM+EA+ LL+LMIQ G  P+ F YNTL+DGFCL GR+
Sbjct: 300 VDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRI 359

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +LFVSMES G + +  SY++LINGYCK+  +  A  LY EM+ K I P V+ YNTL
Sbjct: 360 DDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTL 419

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF   +V  A+ LF EM+ H +  ++  Y   +DGLCKN ++ EA+ELF  L    +
Sbjct: 420 LTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDF 479

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  I+ +NCLIDGLCK+ +++IA ELF  L    L  +V+TY +MIH LC  G+++ A+D
Sbjct: 480 QPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKD 539

Query: 362 LFLDMEAK 369
           LFL ME K
Sbjct: 540 LFLGMEEK 547



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 199/372 (53%), Gaps = 12/372 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F  L      P + ++NTL+  + +       ++L++ M+       +   P+ +
Sbjct: 75  EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSL------IGLAPDFI 128

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C    VD    +  +M     +PN VT+ SL+ G C  +  +EA  L  +M
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ------IGVRPNAFVYNTLMDGF 175
           +  G +PNVV++  ++N LC  G    A +L E M+       + ++PN   Y T++D  
Sbjct: 189 VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G +++ +ELF+ M+  G   +V +YS +I+G C     EGA  L++EM+ +G+ P+V
Sbjct: 249 CKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V +N L   L +  ++E A  L   M + G + DT+ Y T IDG C  G I +A +LF +
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +     E D  +YN LI+G CKSGR+  A +L+R +    ++  V+TYN ++  L  +GK
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428

Query: 356 MDKARDLFLDME 367
           +  A +LF +M+
Sbjct: 429 VRDAWNLFGEMK 440



 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/330 (32%), Positives = 180/330 (54%), Gaps = 6/330 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G  PNV T+N LI+ LC+ G    A +L + M    GE      P+T T
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ-RGE-----SPDTFT 345

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C EG +D A++LF+ M+ + I  + V+YN LI+G+C +    EAK L+ EMM
Sbjct: 346 YNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMM 405

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P V+++N ++  L + GK+ +A  L   M    + P +  YN L+DG C    ++
Sbjct: 406 CKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLS 465

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ELF  +E+   + ++  ++ LI+G CK ++IE A  L++ +  +G++P+V+ Y  + 
Sbjct: 466 EAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMI 525

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  Q+E A  LF  M+  G A +   + T + G C+N  + + VEL + +    + 
Sbjct: 526 HGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFS 585

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            D    + ++D L K  + +    L  + P
Sbjct: 586 PDASTISIVVDLLSKDEKYREYLHLLPTFP 615



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 158/307 (51%), Gaps = 8/307 (2%)

Query: 71  CKEGFVDKAK--ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           CK G + +++   +F  + D    P + ++N+L+        + +   L+  M   G+ P
Sbjct: 66  CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           + ++ N+++N  C   K+D    +L  M++ G  PN   + +L+ G CL  R++ A  L 
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------IKPDVVIYNTLF 242
             M  MG + NV +Y  L+NG C       A+ L+ EML+        IKP++V Y T+ 
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +   +++  +LF EM+  G++ D  AY + I G+C  G    A  LF  +      
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  +N LID LCK+G+++ A  L + + +     D  TYN +I   C +G++D ARDL
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 363 FLDMEAK 369
           F+ ME+K
Sbjct: 366 FVSMESK 372



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 120/230 (52%), Gaps = 6/230 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++      P V TYNTL+ GL R G    A NLF EM   +        P +
Sbjct: 395 VEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD------LTPES 448

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  ++DGLCK   + +A ELF  +++ +  P++  +N LI G C A     A+ LF  
Sbjct: 449 CTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNR 508

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G++PNV+++ V+++ LCK+G+++ A  L   M + G  PN   +NTLM GFC    
Sbjct: 509 LSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDE 568

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           + +  EL   M       +  + SI+++   K+++    L L     ++G
Sbjct: 569 MQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/366 (51%), Positives = 262/366 (71%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF++++  GC PN  TY TLI GLC+TG+  +AL L +EM N   ++GV CKP  +
Sbjct: 179 EATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVI 238

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ IIDGLCK G  D+AKELF +MK + + P+V++Y++LIHGFC A  W+++K LF EM
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +DQGVQP++V+F+V+++ LCK GK+ EA +LLE+MIQ G+ PN   YN+L+DGFC+ G +
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ELF+SM S G + +  SY+ LINGYCK  +++ A++LY+EML  G  P+V  Y TL
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+  +V  A KLF  M+ +GV+A++  Y  F+DGLCKN  + EA+ELF  L+   +
Sbjct: 419 LKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNF 478

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L+I  Y+CLIDGLCK+G+L+ AWELF  L +  L  DVVTYNIMIH  C  G++D A  
Sbjct: 479 KLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANI 538

Query: 362 LFLDME 367
           LF  ME
Sbjct: 539 LFEKME 544



 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 128/362 (35%), Positives = 201/362 (55%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++  G  P+V +Y+TLI+G C  G    + +LF+EM +     GV  +P+ V
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQ----GV--QPDMV 308

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +ID LCKEG V +AK+L   M    I PN++TYNSLI GFC   D N A+ LF+ M
Sbjct: 309 TFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM 368

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+ +S+  ++N  CK  K+ EA  L   M+Q+G  PN   Y TL+ G    G+V
Sbjct: 369 PSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKV 428

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++LF  M++ G   N   Y I ++G CKN  +  A+ L++E+ S   K ++  Y+ L
Sbjct: 429 GDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCL 488

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A++LF+++ + G+  D   Y   I G CK G +  A  LF  +     
Sbjct: 489 IDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGC 548

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI AYN L+ G C+  +L+   +L   + +  +  +  +  I++  LC D K  K  D
Sbjct: 549 TPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVD 608

Query: 362 LF 363
           L 
Sbjct: 609 LL 610



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 176/345 (51%), Gaps = 14/345 (4%)

Query: 30  CRTGH--TIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
           C+TG+   I A + F+ M   +        P   ++  ++ GL K     +   L+ +M+
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHP------IPPISSFNRLLGGLAKINHYSQLFSLYNEMR 118

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
              ++P++ T + L +  C  N  +EA      ++ +G  PNVV++  ++  LC   ++ 
Sbjct: 119 LAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRIS 178

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF------VSMESMGCKHNVF 201
           EA+RL   M ++G  PNA  Y TL+ G C TG VN A +L        S   + CK  V 
Sbjct: 179 EATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVI 238

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +YSI+I+G CK    + A  L+ EM ++G+ PDV+ Y+TL  G     + +++  LFDEM
Sbjct: 239 TYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEM 298

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              GV  D   +   ID LCK G + EA +L   +       ++  YN LIDG C  G L
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             A ELF S+P   L  D ++Y  +I+  C   K+ +A +L+ +M
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 162/307 (52%), Gaps = 8/307 (2%)

Query: 71  CKEGFVD--KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           CK G +   +A   F  M   +  P + ++N L+ G    N +++   L+ EM   G+ P
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           ++ + +++ N LC   ++ EA   +  +++ G  PN   Y TL+ G C+  R++ A  LF
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------IKPDVVIYNTLF 242
           + M+ +GC  N  +Y  LI G C+   +  AL L+ EML+         KP V+ Y+ + 
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL ++ + + A +LF+EM+  G+  D  +Y T I G C  G   ++  LF  +     +
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  ++ LID LCK G++  A +L   + +  ++ +++TYN +I   C  G ++ AR+L
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAREL 364

Query: 363 FLDMEAK 369
           FL M +K
Sbjct: 365 FLSMPSK 371



 Score = 42.0 bits (97), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K+   GC P++  YNTL+ G C        + L  +M   +        PN  +
Sbjct: 536 ANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD------VSPNAAS 589

Query: 63  YTTIIDGLCKEGFVDKAKELFLK 85
            T ++D LCK+    K  +L  K
Sbjct: 590 CTIVVDMLCKDEKYKKFVDLLPK 612


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  393 bits (1010), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 190/366 (51%), Positives = 254/366 (69%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA LF +++  GC PN  TY TL+ GLCRTG+  +AL L +EM N +  +G+  KP  +
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IID LCK+   D+A++LF +MK + + P V++Y SLIHGFC    W EAK LF EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QGVQPNVV+FNV+++ LCK GK+ EA  LLE+MIQ G+ PN   YN+L++GFCL G +
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ELFVSM S GC+ +V  Y++LINGYCK  ++E A+ LY+ ML  G +PDV  Y  L
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 423

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+  +V  A KLF  M+ +G+  D + Y  F++GLCKNG + EA+ELF  L+    
Sbjct: 424 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 483

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LDI  +NCLIDGLCK+G+L+ AWELF  LP+  L  DVVTYNIMIH  C  G++ KA  
Sbjct: 484 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 543

Query: 362 LFLDME 367
           LF  ME
Sbjct: 544 LFQKME 549



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 193/347 (55%), Gaps = 9/347 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++V G  P V +Y +LI+G C  G    A  LF EM N     GV  +PN V
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQ----GV--QPNVV 313

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID LCKEG V +AK+L   M    I PN++TYNSLI GFC   D N A+ LF+ M
Sbjct: 314 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 373

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+V+ + V++N  CK  K++EA +L   M+Q+G RP+   Y  L+ G    G+V
Sbjct: 374 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 433

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++LF  M+  G   +++ Y I +NG CKN  +  A+ L++++ S  IK D+  +N L
Sbjct: 434 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A++LF+++ +  +  D   Y   I   C+ G +V+A  LF+ +     
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 553

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
             D   Y  LI G  +S +L+   EL   + +  +  DV   NI+ H
Sbjct: 554 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV---NILRH 597



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 170/345 (49%), Gaps = 14/345 (4%)

Query: 30  CRTGHTIV--ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
           C+TG+     A   F  M   N        P   ++T ++ GL K     +   L+ +M+
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPT------PPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
              I+P+  T N L++  C  N   E   +   ++ +G  P++V++  ++  LC   ++ 
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF------VSMESMGCKHNVF 201
           +A+ L   M ++G  PNA  Y TLM G C TG ++ A +L        S+  +  K  V 
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           SYSI+I+  CK++  + A  L+ EM  +G+ P V+ Y +L  G     + E A +LF+EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              GV  +   +   ID LCK G ++EA +L   +       ++  YN LI+G C  G L
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 363

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             A ELF S+P      DV+ Y ++I+  C   K+++A  L+  M
Sbjct: 364 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM 408



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 157/307 (51%), Gaps = 8/307 (2%)

Query: 71  CKEGFVD--KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           CK G +   +A + F  M   N  P + ++  L+ G      +++   L+ +M   G+ P
Sbjct: 70  CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISP 129

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +  + N+++N LC   ++ E   ++  +++ G  P+   Y TL+ G C+  R+++A  LF
Sbjct: 130 DCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLF 189

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------IKPDVVIYNTLF 242
             M+ +GC  N  +Y  L+ G C+   I  AL L+ EML+         KP V+ Y+ + 
Sbjct: 190 TRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIII 249

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  + + A  LF+EM+  G+     +Y + I G C  G   EA  LF  +     +
Sbjct: 250 DALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQ 309

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  +N LID LCK G++  A +L   + +  ++ +++TYN +I   C  G ++ AR+L
Sbjct: 310 PNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAREL 369

Query: 363 FLDMEAK 369
           F+ M +K
Sbjct: 370 FVSMPSK 376



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 6/274 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +   G  PN+ TYN+LI G C  G    A  LF  M +        C+P+ 
Sbjct: 329 IEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG------CEPDV 382

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + YT +I+G CK   V++A +L+  M      P+V TY +L+ G        +AK LF  
Sbjct: 383 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 442

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  ++  + + +N LCKNG + EA  L   +    ++ +   +N L+DG C  G+
Sbjct: 443 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 502

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ELF  +     + +V +Y+I+I+ +C+  ++  A  L+ +M   G  PD + Y T
Sbjct: 503 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 562

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           L  G FE  ++E+  +L   M +  V+ D    R
Sbjct: 563 LIRGFFESKKLEKVVELLHMMVQRDVSLDVNILR 596


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  385 bits (989), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/367 (49%), Positives = 259/367 (70%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF++++  GC P+V TY TLI GLC TG+  +AL L +EM N    + + CKPN +
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I+DGLCK G  D+AK+LF +MK + + P++++YNSLIHGFC A  W E+K L  EM
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +DQG+QP++V+FNV+++ LCK GK+ EA +LL +MI+ G+ P+   YN+L++GFC+ G +
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ELFVSM S GC+ +V SY++LINGY K  ++E A+ LY+EML  G +P+V+ Y++L
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSL 396

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+F   +V+ A KLF  M+ HG+A +++ Y  F+DGLCKN  + EA++LF  L+   +
Sbjct: 397 LKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNF 456

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L+I   NCLIDGLCK+G+L+ AWELF  L       +VVTY IMIH  C +G++DKA  
Sbjct: 457 KLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANV 516

Query: 362 LFLDMEA 368
           L   MEA
Sbjct: 517 LIQKMEA 523



 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 202/362 (55%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++  G  P++ +YN+LI+G C  G    +  L +EM +         +P+ V
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG------LQPDMV 286

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID LCKEG V +AK+L   M +  I P++VTYNSLI GFC   D N A+ LF+ M
Sbjct: 287 TFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM 346

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+V+S+NV++N   K  K++EA +L   M+ +G RPN   Y++L+ G  L G+V
Sbjct: 347 PSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKV 406

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A++LF  M++ G   N ++Y I ++G CKN  +  A+ L++E+ S   K ++   N L
Sbjct: 407 DDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCL 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A++LF+++   G   +   Y   I G C+ G + +A  L + +     
Sbjct: 467 IDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGC 526

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN L+ G  +S +L+   +L   + +  +  D +T +I++  L  D K  +   
Sbjct: 527 TPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLH 586

Query: 362 LF 363
           L 
Sbjct: 587 LL 588



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 175/345 (50%), Gaps = 14/345 (4%)

Query: 30  CRTGHTIV--ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
           C+TG+     AL+ F  M            P+  ++  ++ GL K     +   L+ +M+
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTP------TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMR 96

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
              ++ +  T N L++  C  N   E    F  ++ +G  PN+V++N ++  LC   ++ 
Sbjct: 97  LSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF------VSMESMGCKHNVF 201
           EA+RL   M ++G  P+   Y TL+ G C TG +N A +L       +S   + CK NV 
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+++G CK    + A  L+ EM ++G+ P ++ YN+L  G     + E + +L DEM
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              G+  D   +   ID LCK G ++EA +L   +       D+  YN LI+G C  G L
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             A ELF S+P      DV++YN++I+      K+++A  L+ +M
Sbjct: 337 NSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/307 (30%), Positives = 156/307 (50%), Gaps = 8/307 (2%)

Query: 71  CKEGFVDKAKEL--FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           CK G V     L  F  M      P++ ++N L+ G      +++   L+ +M   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +  + N+++N LC   ++ E       +++ G  PN   YNTL+ G C+  R++ A  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK------GIKPDVVIYNTLF 242
           + M+ +GC  +V +Y  LI G C    I  AL L+ EML+         KP+V+ YN + 
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL ++ + + A +LF+EM+  G+     +Y + I G C  G   E+  L   +     +
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  +N LID LCK G++  A +L   +    ++ D+VTYN +I   C  G ++ AR+L
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 363 FLDMEAK 369
           F+ M +K
Sbjct: 343 FVSMPSK 349



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 185/349 (53%), Gaps = 13/349 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  L  ++   G +P++ T+N LI+ LC+ G  I A  L   M     E G+V  P+ V
Sbjct: 268 ESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI----ESGIV--PDLV 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+G C  G ++ A+ELF+ M  +   P+V++YN LI+G+       EA  L+ EM
Sbjct: 322 TYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEM 381

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PNV++++ ++  +   GK+D+A +L  +M   G+  N++ Y   +DG C    +
Sbjct: 382 LLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCL 441

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  ++S   K  + + + LI+G CK  ++E A  L+ ++ ++G +P+VV Y  +
Sbjct: 442 FEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIM 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     QV++A  L  +M+ +G   D   Y T + G  ++  + E V+L    R+ + 
Sbjct: 502 IHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH--RMAQK 559

Query: 302 ELDIRAYNC--LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           ++   A  C  ++D L K  + +   E    LPR  +   V  + +M H
Sbjct: 560 DVSPDAITCSIVVDMLSKDEKYQ---ECLHLLPRFPIQKGVDKHLLMTH 605



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 153/300 (51%), Gaps = 6/300 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +   G  P++ TYN+LI G C  G    A  LF  M +        C+P+ 
Sbjct: 302 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG------CEPDV 355

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  +I+G  K   V++A +L+ +M      PNV+TY+SL+ G   A   ++AK LF  
Sbjct: 356 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 415

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  N  ++ + ++ LCKN  + EA +L   +     +      N L+DG C  G+
Sbjct: 416 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 475

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ELF  + + G + NV +Y+I+I+G+C+  +++ A  L  +M + G  PD++ YNT
Sbjct: 476 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 535

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G +E +++E   +L   M +  V+ D       +D L K+    E + L     I K
Sbjct: 536 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 595


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  375 bits (963), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 185/366 (50%), Positives = 250/366 (68%), Gaps = 8/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA LF +++  GC PN  TY TL+ GLCRTG+  +AL L +EM N +  +G+  KP  +
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IID LCK+   D+A++LF +MK + + P V++Y SL+        W EAK LF EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEM 295

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QGVQPNVV+FNV+++ LCK GK+ EA  LLE+MIQ G+ PN   YN+L++GFCL G +
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ELFVSM S GC+ +V  Y++LINGYCK  ++E A+ LY+ ML  G +PDV  Y  L
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGAL 415

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+  +V  A KLF  M+ +G+  D + Y  F++GLCKNG + EA+ELF  L+    
Sbjct: 416 LTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNI 475

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LDI  +NCLIDGLCK+G+L+ AWELF  LP+  L  DVVTYNIMIH  C  G++ KA  
Sbjct: 476 KLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANI 535

Query: 362 LFLDME 367
           LF  ME
Sbjct: 536 LFQKME 541



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 189/347 (54%), Gaps = 17/347 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++V G  P V +Y +L+           A  LF EM N     GV  +PN V
Sbjct: 260 EARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQ----GV--QPNVV 305

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID LCKEG V +AK+L   M    I PN++TYNSLI GFC   D N A+ LF+ M
Sbjct: 306 TFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 365

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+V+ + V++N  CK  K++EA +L   M+Q+G RP+   Y  L+ G    G+V
Sbjct: 366 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 425

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++LF  M+  G   +++ Y I +NG CKN  +  A+ L++++ S  IK D+  +N L
Sbjct: 426 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 485

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A++LF+++ +  +  D   Y   I   C+ G +V+A  LF+ +     
Sbjct: 486 IDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGC 545

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
             D   Y  LI G  +S +L+   EL   + +  +  DV   NI+ H
Sbjct: 546 TPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV---NILRH 589



 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 169/345 (48%), Gaps = 22/345 (6%)

Query: 30  CRTGH--TIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
           C+TG+   I A   F  M   N        P   ++T ++ GL K     +   L+ +M+
Sbjct: 70  CKTGNITAIQAFQFFHLMMYSNPT------PPLSSFTHLLSGLAKIKHYSQVFYLYNQMR 123

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
              I+P+  T N L++  C  N   E   +   ++ +G  P++V++  ++  LC   ++ 
Sbjct: 124 LSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRIS 183

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF------VSMESMGCKHNVF 201
           +A+ L   M ++G  PNA  Y TLM G C TG ++ A +L        S+  +  K  V 
Sbjct: 184 KAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVI 243

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           SYSI+I+  CK++  + A  L+ EM  +G+ P V+ Y +L          E A +LF+EM
Sbjct: 244 SYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEM 295

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              GV  +   +   ID LCK G ++EA +L   +       ++  YN LI+G C  G L
Sbjct: 296 VNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDL 355

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             A ELF S+P      DV+ Y ++I+  C   K+++A  L+  M
Sbjct: 356 NSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGM 400



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 6/274 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +   G  PN+ TYN+LI G C  G    A  LF  M +        C+P+ 
Sbjct: 321 IEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKG------CEPDV 374

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + YT +I+G CK   V++A +L+  M      P+V TY +L+ G        +AK LF  
Sbjct: 375 ICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGV 434

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  ++  + + +N LCKNG + EA  L   +    ++ +   +N L+DG C  G+
Sbjct: 435 MKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGK 494

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ELF  +     + +V +Y+I+I+ +C+  ++  A  L+ +M   G  PD + Y T
Sbjct: 495 LETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYAT 554

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           L  G FE  ++E+  +L   M +  V+ D    R
Sbjct: 555 LIRGFFESKKLEKVVELLHMMVQRDVSLDVNILR 588


>gi|255559961|ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539836|gb|EEF41416.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 628

 Score =  361 bits (926), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 178/371 (47%), Positives = 251/371 (67%), Gaps = 13/371 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  + VF C P+  T   LI+GLCRTG+T  AL L E M NGN +FG+ CKP  V
Sbjct: 195 EAVRVFKIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVV 254

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IID LCK+G V++AKE F++MK++ I PNVVTY SL+HG C A++W EAK LFIEM
Sbjct: 255 SYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEM 314

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+VV+F+V++  LCK GK+ EAS L +LM+Q  V P+   YN L++G+CL G V
Sbjct: 315 VDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMV 374

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  +++F+SM +  C+H+  SYSIL+  YCK+ E+ GA+ LY EM+ +GI+P V+ Y+  
Sbjct: 375 DEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRGIQPTVITYS-- 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR---TFIDGLCKNGYIVEAVELFRTLRI 298
                   +V  A KLF E+Q   +  D+ +Y     ++DGLCKNG + EA+++F  L  
Sbjct: 433 --------KVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLEN 484

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            K+  ++  +N LI+G+C+S +L+IAWELF  L    L  DVVTY IMI+ LC  G+  K
Sbjct: 485 CKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKVGQPQK 544

Query: 359 ARDLFLDMEAK 369
           A DLFL+ME K
Sbjct: 545 AYDLFLEMEEK 555



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 158/325 (48%), Gaps = 34/325 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF+++   G  P+V T++ LI  LC+ G    A  LF+ M     E      P+T 
Sbjct: 306 EAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVE------PSTR 359

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+G C  G VD+ K++FL M ++    +  +Y+ L+  +C  ++ + A  L+ EM
Sbjct: 360 TYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREM 419

Query: 122 MDQGVQPNVVSF----------------------------NVIMNELCKNGKMDEASRLL 153
           MD+G+QP V+++                            NV ++ LCKNG + EA  + 
Sbjct: 420 MDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVF 479

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             +       N  ++N+L++G C + ++  A ELF  + +   + +V +Y+I+I G CK 
Sbjct: 480 YGLENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRLCNEALQPDVVTYTIMIYGLCKV 539

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            + + A  L+ EM  KG  P+VV +NTL  GL    +  +  +L  +M    ++ D    
Sbjct: 540 GQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLNSERPKIVELLHKMAARKLSPDASTL 599

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRI 298
              +D L K+    E + L  T  +
Sbjct: 600 LIVMDILLKDENYHECLNLLPTFPV 624



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 146/339 (43%), Gaps = 43/339 (12%)

Query: 71  CKEG--FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           CK G   + +A   F +M      P +  +N+L         +     +   M   G+  
Sbjct: 81  CKSGDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLK 140

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N +S N+++N LC   ++ E   +  ++++ G RPN   +  L+ G CL G++  A  +F
Sbjct: 141 NFISLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVF 200

Query: 189 VSM--------------------------------ESM---------GCKHNVFSYSILI 207
             M                                E+M          CK  V SYS +I
Sbjct: 201 KIMGVFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCII 260

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +  CK+  +E A   + EM  KGI P+VV Y +L  GL    + E A +LF EM  HG+ 
Sbjct: 261 DSLCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLL 320

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   +   I  LCK G + EA  LF  +     E   R YN LI+G C +G +    ++
Sbjct: 321 PDVVTFSVLIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKI 380

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           F S+       D  +Y+I++ A C D ++  A  L+ +M
Sbjct: 381 FLSMVNKRCQHDAGSYSILMKAYCKDSEVHGAMILYREM 419


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  324 bits (831), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 169/351 (48%), Positives = 231/351 (65%), Gaps = 24/351 (6%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ TYNTLI GLCR  H I                       +V    IIDGLCK G  
Sbjct: 43  PDIVTYNTLIKGLCRV-HRI-----------------------SVATCIIIDGLCKVGHE 78

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+AKE+F +MK + + PNV++Y+SL+HGFC A    E+K LF EM+DQGVQPN+V FNV+
Sbjct: 79  DEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVL 138

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK GK+ EA +LLE+ IQ G+  +   YN+L+DGFC  G ++ A +LF+SM S GC
Sbjct: 139 IDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGC 198

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           +HN  SY+ILINGYCK  ++E A++LY+EM   G +P+V  Y+TL  GL +  +V  A K
Sbjct: 199 EHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANK 258

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF  M+  G++ D+  Y  F+DGLCKNG + EA+ELF  L+   ++LD  +Y+ LIDGLC
Sbjct: 259 LFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLC 318

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           K+G+++IAWE F+ L +  L  +VVT NIMIH  C   ++DKA  LF  ME
Sbjct: 319 KAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKME 369



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/333 (33%), Positives = 179/333 (53%), Gaps = 9/333 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +++  G  PNV +Y++L++G C  G    +  LF EM +     GV  +PN V
Sbjct: 80  EAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ----GV--QPNLV 133

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +ID LCKEG V +AK+L        I  ++VTYNSLI GFC   D + A+ LF+ M
Sbjct: 134 QFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSM 193

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G + N +S+ +++N  CK  K++EA  L   M Q+G RPN   Y+TL+ G   TG+V
Sbjct: 194 PSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKV 253

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M++ G   +   Y I ++G CKN  +  A+ L++E+ S   K D   Y+ L
Sbjct: 254 GDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRL 313

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +VE A++ F ++ + G+  +       I G C+   + +A  LF  +  ++ 
Sbjct: 314 IDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEE 373

Query: 302 E---LDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
                DI  YN L+ G C+S +L+    L   +
Sbjct: 374 NGCTPDIITYNTLLRGFCESNKLEEVVNLLHKM 406



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 121/230 (52%), Gaps = 9/230 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF+ +   GCE N  +Y  LING C+      A+NL+ EM        V  +PN  T
Sbjct: 186 ARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ------VGKRPNVKT 239

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T++ GL + G V  A +LF  MK   I+ +   Y   + G C      EA  LF E+ 
Sbjct: 240 YSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELK 299

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
               + +  S++ +++ LCK GK++ A    + + Q G++PN    N ++ GFC   +V+
Sbjct: 300 SYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVD 359

Query: 183 RAEELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           +A  LF  ME M   GC  ++ +Y+ L+ G+C++ ++E  ++L  +M  +
Sbjct: 360 KANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 101/197 (51%), Gaps = 19/197 (9%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M   G   ++F+ +IL N  C    +   L+  + +L +G  PD+V YNTL  GL  +H+
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 251 V-----------------ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +                 + A ++F+EM+  G+  +  +Y + + G C  G + E+  LF
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALCA 352
             +     + ++  +N LID LCK G++  A +L   ++ RG+++ D+VTYN +I   C 
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIIL-DLVTYNSLIDGFCK 179

Query: 353 DGKMDKARDLFLDMEAK 369
            G +  AR LFL M +K
Sbjct: 180 IGDLSSARKLFLSMPSK 196


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  322 bits (824), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 170/383 (44%), Positives = 240/383 (62%), Gaps = 22/383 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E  A F  +   G  PN+ TYNTLI GLC       A  LF  M        + C P+ V
Sbjct: 122 EGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQK------LGCTPDVV 175

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE------NINPNVVTYNSLIHGFCYANDWNEAK 115
           TY T+I GLC  G ++ A +L  +M ++      N  PNV+TYN ++ G C     +EAK
Sbjct: 176 TYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAK 235

Query: 116 CLFIEM----------MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
            LF EM          +DQG+QP++V+FNV+++ LCK GK+ EA +LL +MI+ G+ P+ 
Sbjct: 236 QLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 295

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             YN+L++GFC+ G +N A ELFVSM S GC+ +V SY++LINGY K  ++E A+ LY+E
Sbjct: 296 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 355

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML  G +P+V+ Y++L  G+F   +V+ A KLF  M+ HG+A +++ Y  F+DGLCKN  
Sbjct: 356 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDC 415

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA++LF  L+   ++L+I   NCLIDGLCK+G+L+ AWELF  L       +VVTY I
Sbjct: 416 LFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTI 475

Query: 346 MIHALCADGKMDKARDLFLDMEA 368
           MIH  C +G++DKA  L   MEA
Sbjct: 476 MIHGFCREGQVDKANVLIQKMEA 498



 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/407 (32%), Positives = 213/407 (52%), Gaps = 45/407 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF++++  GC P+V TY TLI GLC TG+  +AL L +EM N    + + CKPN +
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPN--------------------------- 94
           TY  I+DGLCK G  D+AK+LF +MK + + PN                           
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKV 276

Query: 95  ------------------VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
                             +VTYNSLI GFC   D N A+ LF+ M  +G +P+V+S+NV+
Sbjct: 277 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVL 336

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N   K  K++EA +L   M+ +G RPN   Y++L+ G  L G+V+ A++LF  M++ G 
Sbjct: 337 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGI 396

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N ++Y I ++G CKN  +  A+ L++E+ S   K ++   N L  GL +  ++E A++
Sbjct: 397 AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 456

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF+++   G   +   Y   I G C+ G + +A  L + +       DI  YN L+ G  
Sbjct: 457 LFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFY 516

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +S +L+   +L   + +  +  D +T +I++  L  D K  +   L 
Sbjct: 517 ESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLL 563



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 180/337 (53%), Gaps = 13/337 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P++ T+N LI+ LC+ G  I A  L   M     E G+V  P+ VTY ++I+G C  
Sbjct: 255 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMI----ESGIV--PDLVTYNSLIEGFCMV 308

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++ A+ELF+ M  +   P+V++YN LI+G+       EA  L+ EM+  G +PNV+++
Sbjct: 309 GDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY 368

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++  +   GK+D+A +L  +M   G+  N++ Y   +DG C    +  A +LF  ++S
Sbjct: 369 DSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKS 428

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              K  + + + LI+G CK  ++E A  L+ ++ ++G +P+VV Y  +  G     QV++
Sbjct: 429 SNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDK 488

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC--L 311
           A  L  +M+ +G   D   Y T + G  ++  + E V+L    R+ + ++   A  C  +
Sbjct: 489 ANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH--RMAQKDVSPDAITCSIV 546

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           +D L K  + +   E    LPR  +   V  + +M H
Sbjct: 547 VDMLSKDEKYQ---ECLHLLPRFPIQKGVDKHLLMTH 580



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 18/314 (5%)

Query: 71  CKEGFVDKAKEL--FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           CK G V     L  F  M      P++ ++N L+ G      +++   L+ +M   G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +  + N+++N LC   ++ E       +++ G  PN   YNTL+ G C+  R++ A  LF
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK------GIKPDVVIYNTLF 242
           + M+ +GC  +V +Y  LI G C    I  AL L+ EML+         KP+V+ YN + 
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 243 IGLFEIHQVERAFKLFDEMQR----------HGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            GL ++ + + A +LF+EM+            G+  D   +   ID LCK G ++EA +L
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
              +       D+  YN LI+G C  G L  A ELF S+P      DV++YN++I+    
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 342

Query: 353 DGKMDKARDLFLDM 366
             K+++A  L+ +M
Sbjct: 343 TLKVEEAMKLYNEM 356



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 179/357 (50%), Gaps = 24/357 (6%)

Query: 30  CRTGHTIV--ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
           C+TG+     AL+ F  M            P+  ++  ++ GL K     +   L+ +M+
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTP------TPSLSSFNHLLSGLAKIKHYSQVFSLYNQMR 96

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
              ++ +  T N L++  C  N   E    F  ++ +G  PN+V++N ++  LC   ++ 
Sbjct: 97  LSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRIS 156

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF------VSMESMGCKHNVF 201
           EA+RL   M ++G  P+   Y TL+ G C TG +N A +L       +S   + CK NV 
Sbjct: 157 EATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVI 216

Query: 202 SYSILINGYCKNKEIEGALSLY----------SEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           +Y+I+++G CK    + A  L+          +EML +G++PD+V +N L   L +  +V
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKV 276

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             A KL   M   G+  D   Y + I+G C  G +  A ELF ++     E D+ +YN L
Sbjct: 277 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVL 336

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           I+G  K+ +++ A +L+  +       +V+TY+ ++  +   GK+D A+ LF  M+A
Sbjct: 337 INGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKA 393



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 153/300 (51%), Gaps = 6/300 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +   G  P++ TYN+LI G C  G    A  LF  M +        C+P+ 
Sbjct: 277 IEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG------CEPDV 330

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  +I+G  K   V++A +L+ +M      PNV+TY+SL+ G   A   ++AK LF  
Sbjct: 331 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 390

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  N  ++ + ++ LCKN  + EA +L   +     +      N L+DG C  G+
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ELF  + + G + NV +Y+I+I+G+C+  +++ A  L  +M + G  PD++ YNT
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G +E +++E   +L   M +  V+ D       +D L K+    E + L     I K
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 570


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  313 bits (803), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 164/357 (45%), Positives = 225/357 (63%), Gaps = 12/357 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V T+ TLI GLC     I A  LF  M        + C PN VTY T+I GLC  G +
Sbjct: 159 PDVVTFTTLIKGLCVEHRIIEATKLFMRMQK------LGCTPNVVTYGTLIKGLCALGNI 212

Query: 77  DKAKELFLKMKDE------NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           + A +   +M ++      N  PNV++Y+ +I G C   +W EA CLF EM+DQGVQPNV
Sbjct: 213 NIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNV 272

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V+F+V+++ LCK G++ +A +LLE+MIQIG+ PN F Y +L+ GFCL G +N A+ELFVS
Sbjct: 273 VTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVS 332

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M S G + +V SY++LINGYCK  ++E A+ L++EML  G+ PDV     L   LF   +
Sbjct: 333 MPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGK 392

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A +LF  ++ + +  D      F+DGLCKNGYI EA++LF  L     +LDI  + C
Sbjct: 393 VDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGC 452

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LIDGLCK+G+L+ AWELF  L    +  D + Y+ MIH  C  G++DKA  LF  ME
Sbjct: 453 LIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKME 509



 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/398 (32%), Positives = 205/398 (51%), Gaps = 35/398 (8%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LFM+++  GC PNV TY TLI GLC  G+  +AL   +EM N    +   C+PN 
Sbjct: 178 IEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNV 237

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT----------------------- 97
           ++Y+ IIDGLCK G  ++A  LF +M D+ + PNVVT                       
Sbjct: 238 ISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEM 297

Query: 98  ------------YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                       Y SLI GFC   D N AK LF+ M  +G +P+V+S+N+++N  CK  K
Sbjct: 298 MIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLK 357

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           ++EA +L   M+ +G+ P+      L+    L G+V+ A+ELF  ++      ++    I
Sbjct: 358 VEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCI 417

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            ++G CKN  I  A+ L++E+ S  +K D+  +  L  GL +  ++E A++LF+++   G
Sbjct: 418 FLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D  AY + I G CK G + +A  LF+ +       D+  Y+ L+ G  +S +L+   
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +L   +    +  D   Y I+   +C D K  +  DL 
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 174/345 (50%), Gaps = 18/345 (5%)

Query: 34  HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL---CKEGF--VDKAKELF-LKMK 87
           H+   L+   ++++ N    +   P  +++   I      CK G   V +A + F L M+
Sbjct: 30  HSPAVLSSNPQISSANNPKSLHASPERISFQHGIPMFLHKCKTGSISVTQAHQFFDLMMR 89

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                 ++ ++N L+ G      +++   L+ +M   G+ P++++ N+++N LC   +++
Sbjct: 90  ------SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRIN 143

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           E    +  +++ G  P+   + TL+ G C+  R+  A +LF+ M+ +GC  NV +Y  LI
Sbjct: 144 EGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLI 203

Query: 208 NGYCKNKEIEGALSLYSEMLSK------GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            G C    I  AL  + EML+         +P+V+ Y+ +  GL ++   E A  LF+EM
Sbjct: 204 KGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEM 263

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              GV  +   +   ID LCK G +++A +L   +  +    ++  Y  LI G C  G L
Sbjct: 264 VDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDL 323

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             A ELF S+P      DV++YN++I+  C   K+++A  LF +M
Sbjct: 324 NSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEM 368



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            V +A + FD M R       +++   + GL K  +  +   L++ + +     D+   N
Sbjct: 76  SVTQAHQFFDLMMR-----SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLN 130

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            LI+ LC   R+         + R   I DVVT+  +I  LC + ++ +A  LF+ M+
Sbjct: 131 ILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQ 188


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  306 bits (783), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/366 (42%), Positives = 228/366 (62%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G +P+V +Y+T+INGLC++G+T +AL L  +M          CKPN V
Sbjct: 180 EAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKG------CKPNLV 233

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTTIID LCK+  V+ A +L  +M D  I P+VVTY++++HGFC     NEA  LF EM
Sbjct: 234 AYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEM 293

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PN V+F ++++ LCK G + EA  + E M + G  PNA+ YN LMDG+CL  ++
Sbjct: 294 VGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQM 353

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+++   M   GC   V SY+ILINGYCK + ++ A SL  EM  K + PD V Y+TL
Sbjct: 354 DEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTL 413

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ + + A  LF EM   G+  D   Y T +DGLCK+G++ EA++L ++++  K 
Sbjct: 414 MQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKI 473

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E DI  YN LI+G+  +G+L++A ELF  L    +   + TY IMI  L  +G  D+A +
Sbjct: 474 EPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYE 533

Query: 362 LFLDME 367
           LF  ME
Sbjct: 534 LFRKME 539



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 172/347 (49%), Gaps = 41/347 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  P+V TY+T+++G C  GH   A  LF EM   N        PNTV
Sbjct: 250 DAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRN------VMPNTV 303

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T ++DGLCKEG V +A+ +F  M  +   PN  TYN+L+ G+C  N  +EA+ +   M
Sbjct: 304 TFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIM 363

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL------EL-------------------- 155
           +D+G  P V S+N+++N  CK  ++DEA  LL      EL                    
Sbjct: 364 VDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRP 423

Query: 156 ---------MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                    M   G+ P+   Y+TL+DG C  G ++ A +L  SM+    + ++  Y+IL
Sbjct: 424 QEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNIL 483

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G     ++E A  L+S++ + GI+P +  Y  +  GL +    + A++LF +M+  G 
Sbjct: 484 IEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGF 543

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             ++ +Y   I G  +N     A+ L   +   ++  D   +  L+D
Sbjct: 544 LPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 163/313 (52%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P+ V +   +  + K+        L  +M    +  NV + N LI+  C  N    A  
Sbjct: 89  RPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAIS 148

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M   G+QP+ ++FN ++N  C  G++ EA  L   M++ G +P+   Y+T+++G C
Sbjct: 149 VLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLC 208

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            +G  + A +L   ME  GCK N+ +Y+ +I+  CK+  +  A+ L SEM+ +GI PDVV
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y+T+  G   +  +  A  LF+EM    V  +T  +   +DGLCK G + EA  +F  +
Sbjct: 269 TYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAM 328

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E +   YN L+DG C + ++  A ++   +        V +YNI+I+  C   ++
Sbjct: 329 TKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRL 388

Query: 357 DKARDLFLDMEAK 369
           D+A+ L ++M  K
Sbjct: 389 DEAKSLLVEMSEK 401



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 143/288 (49%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M   N  P+VV +   +        ++    L  +M   GV  NV S N+
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC+   +  A  +L  M ++G++P+A  +NTL++G C+ G +  A  LF  M   G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +V SYS +ING CK+     AL L  +M  KG KP++V Y T+   L +   V  A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  EM   G+  D   Y T + G C  G++ EA  LF  +       +   +  L+DGL
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           CK G +  A  +F ++ +     +  TYN ++   C + +MD+A+ + 
Sbjct: 313 CKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVL 360



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 116/225 (51%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            +D+A      M+++  RP+   +   +       + +    L   M+  G  HNV+S +
Sbjct: 72  SIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 131

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN  C+   +  A+S+  +M   GI+PD + +NTL  G     +++ A  LF+EM R 
Sbjct: 132 ILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRR 191

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D  +Y T I+GLCK+G    A++L R +     + ++ AY  +ID LCK   +  A
Sbjct: 192 GHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDA 251

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +L   +    +  DVVTY+ ++H  C+ G +++A  LF +M  +
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGR 296


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  304 bits (778), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 157/366 (42%), Positives = 225/366 (61%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G EPNV +YNT+INGLC+ G+TI+A+ +F +M    G      KPN V
Sbjct: 184 EAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG------KPNVV 237

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TIID LCK+  V++A E   +M D  I P+VVTYN+++HGFC     NEA  LF EM
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V P+ V+FN++++ LCK G + EA  + E M + G  PNA+ YN LMDG+CL  ++
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M   GC  N+ SY+ILINGYCK+K +  A  L SEM  K + PD V Y+TL
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL 417

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ +   A  LF EM   G+  D  AY   +DG CK+G++ EA++L + +   + 
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +I  Y  LI G+  +G+L++A ELF  L    +  D+ TYN+MI  L  +G  D+A +
Sbjct: 478 KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYE 537

Query: 362 LFLDME 367
            F  ME
Sbjct: 538 FFRKME 543



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 121/346 (34%), Positives = 189/346 (54%), Gaps = 6/346 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     ++   G  P+V TYNT+++G C  G    A  LF+EM   N        P+TV
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRN------VMPDTV 307

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++DGLCKEG V +A+ +   M ++   PN  TYN+L+ G+C  N  +EA  +   M
Sbjct: 308 TFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIM 367

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PN+ S+N+++N  CK+ +M+EA RLL  M +  + P+   Y+TLM G C  GR 
Sbjct: 368 IGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRP 427

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M S G   ++ +YSIL++G+CK+  ++ AL L  EM  + IKP++++Y  L
Sbjct: 428 REALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTIL 487

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+F   ++E A +LF ++   G+  D W Y   I GL K G   EA E FR +    +
Sbjct: 488 IRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGF 547

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
             D  +YN +I G  ++     A +L   +      AD  T+ +++
Sbjct: 548 LPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 160/313 (51%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P+ V +   +  + K+     A  L  +M    +  NV + N LI+  C  +  + A  
Sbjct: 93  RPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVS 152

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M   G+QP+ ++FN ++N LC  GK+ EA  L   M+  G  PN   YNT+++G C
Sbjct: 153 VMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC 212

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G    A  +F  ME    K NV +Y+ +I+  CK++ +  A+   SEM+ +GI PDVV
Sbjct: 213 KNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVV 272

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YNT+  G   + Q+  A +LF EM    V  DT  +   +DGLCK G + EA  +  T+
Sbjct: 273 TYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETM 332

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E +   YN L+DG C   ++  A ++   +       ++ +YNI+I+  C   +M
Sbjct: 333 TEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRM 392

Query: 357 DKARDLFLDMEAK 369
           ++A+ L  +M  K
Sbjct: 393 NEAKRLLSEMSEK 405



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 120/225 (53%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            +D+A      M+++  RP+   +   +       + + A  L   M+  G  HNV+S +
Sbjct: 76  SIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLN 135

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +LIN  C+   ++ A+S+  +M   GI+PD + +NTL  GL    +++ A  LF+EM   
Sbjct: 136 VLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWS 195

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   +  +Y T I+GLCKNG  + AV +FR +   + + ++  YN +ID LCK   +  A
Sbjct: 196 GHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEA 255

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            E    +    +  DVVTYN ++H  C+ G++++A  LF +M  +
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR 300


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  303 bits (777), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 157/366 (42%), Positives = 227/366 (62%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   G +P+V TY T+INGLC+ G T+ A  LF +M    GE G  C+P+ V
Sbjct: 210 QAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKM----GEAG--CQPDVV 263

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+TIID LCK+  V++A ++F  MK + I+PN+ TYNSLI G C  + W EA  +  EM
Sbjct: 264 TYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEM 323

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M   + PN+V+F++++N  CK G + EA  +L+ M ++GV PN   Y++LM+G+ L   V
Sbjct: 324 MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEV 383

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M + GCK +VFSY+ILINGYCK K I  A  L++EM+ +G+ PD+V YNTL
Sbjct: 384 VEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTL 443

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ ++  A  LF  M  +G   D   Y   +DG CK GY+ +A  LFR ++    
Sbjct: 444 IDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYL 503

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  YN LID +CKS  LK A +LF  L    L  +V  Y  +I+ LC +G +D+A +
Sbjct: 504 KPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALE 563

Query: 362 LFLDME 367
            F +ME
Sbjct: 564 AFRNME 569



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 176/304 (57%), Gaps = 6/304 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+A+  ++      PN+ T++ LIN  C+ G+   A  + + M     E GV  +PN V
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMT----EMGV--EPNVV 368

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++++G   +  V +A++LF  M  +   P+V +YN LI+G+C A    EAK LF EM
Sbjct: 369 TYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 428

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ P++VS+N +++ LC+ G++ EA  L + M+  G  P+   Y+ L+DGFC  G +
Sbjct: 429 IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 488

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF +M+S   K N+  Y+ILI+  CK++ ++ A  L+SE+  +G++P+V IY T+
Sbjct: 489 AKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTI 548

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   ++ A + F  M+  G   + ++Y   I G  ++     AV+L   +R   +
Sbjct: 549 INGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGF 608

Query: 302 ELDI 305
             D+
Sbjct: 609 VADV 612



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 196/405 (48%), Gaps = 46/405 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGH---TIVALNLFEEMANGNGEFGVVCKP 58
           +A A F  +      P +  +N L++ + +  H    +++L+   E+A           P
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAG--------LSP 155

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +T T   +I+   +   VD    +  K+    +   +VT+N+LI+G C    + +A  LF
Sbjct: 156 DTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELF 215

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+ +G QP+V ++  I+N LCK G+   A+ L   M + G +P+   Y+T++D  C  
Sbjct: 216 DDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKD 275

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS---------- 228
            RVN A ++F  M++ G   N+F+Y+ LI G C       A ++ +EM+S          
Sbjct: 276 RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 335

Query: 229 -------------------------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
                                     G++P+VV Y++L  G     +V  A KLFD M  
Sbjct: 336 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMIT 395

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G   D ++Y   I+G CK   I EA +LF  +       DI +YN LIDGLC+ GRL+ 
Sbjct: 396 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 455

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           A +LF+++     + D+ TY+I++   C  G + KA  LF  M++
Sbjct: 456 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 134/236 (56%), Gaps = 6/236 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   GC+P+VF+YN LING C+      A  LF EM +          P+ 
Sbjct: 384 VEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQG------LTPDI 437

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+IDGLC+ G + +A +LF  M      P++ TY+ L+ GFC      +A  LF  
Sbjct: 438 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 497

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    ++PN+V +N++++ +CK+  + EA +L   +   G++PN  +Y T+++G C  G 
Sbjct: 498 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGL 557

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           ++ A E F +ME  GC  N FSY+++I G+ ++K+   A+ L  EM  KG   DV 
Sbjct: 558 LDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVA 613



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 1/171 (0%)

Query: 200 VFSYSILINGYCKNKEIEGA-LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +  ++ L++   K +    A +SL  +M   G+ PD    + L    F++ +V+  F + 
Sbjct: 121 IIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVL 180

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            ++ + G+      + T I+GLCK G   +AVELF  +    Y+ D+  Y  +I+GLCK 
Sbjct: 181 AKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKI 240

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G    A  LFR +       DVVTY+ +I +LC D ++++A D+F  M+AK
Sbjct: 241 GETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAK 291



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/131 (35%), Positives = 72/131 (54%), Gaps = 6/131 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  ++    +PN+  YN LI+ +C++ +   A  LF E+      F    +PN  
Sbjct: 490 KAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSEL------FVQGLQPNVQ 543

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTTII+GLCKEG +D+A E F  M+++   PN  +YN +I GF    D + A  L  EM
Sbjct: 544 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEM 603

Query: 122 MDQGVQPNVVS 132
            ++G   +V +
Sbjct: 604 REKGFVADVAT 614


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 158/366 (43%), Positives = 228/366 (62%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G EPNV +Y T+INGLC+TG+T +A+++F++M   NG     CKPN V
Sbjct: 181 EAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPNVV 234

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+TIID LCK+  V+ A E   +M +  I PNV TYNS++HGFC     NEA  LF EM
Sbjct: 235 TYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PN V+F ++++ LCK G + EA  + E M + GV P+   YN LMDG+CL   +
Sbjct: 295 VGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLM 354

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A+++F  M   GC     SY+ILINGYCK++ ++ A SL +EM  K + PD V Y+TL
Sbjct: 355 NEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 414

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ + + A  LF EM  +G   +   Y   +DG CK+G++ EA++L ++++  K 
Sbjct: 415 MQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKL 474

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E +I  Y  LI+G+  +G+L++A ELF  L       D+ TY +MI  L  +G  D+A D
Sbjct: 475 EPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYD 534

Query: 362 LFLDME 367
           LF  ME
Sbjct: 535 LFRKME 540



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 194/361 (53%), Gaps = 6/361 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++ +F    NV++ N LIN LCR  H   ++++  +M      F +   P+ +T+  +I+
Sbjct: 118 QMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKM------FKLGIHPDAITFNALIN 171

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC EG + +A ELF +M      PNV++Y ++I+G C   + + A  +F +M   G +P
Sbjct: 172 GLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKP 231

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV+++ I++ LCK+  +++A   L  M++ G+ PN F YN+++ GFC  G++N A  LF
Sbjct: 232 NVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLF 291

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M       N  +++IL++G CK   +  A  ++  M  KG++PD+  YN L  G    
Sbjct: 292 KEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQ 351

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             +  A K+F+ M R G A    +Y   I+G CK+  + EA  L   +       D   Y
Sbjct: 352 RLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTY 411

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           + L+ GLC+ GR K A  LF+ +       ++VTY I++   C  G +D+A  L   M+ 
Sbjct: 412 STLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKE 471

Query: 369 K 369
           K
Sbjct: 472 K 472



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 162/313 (51%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P+ V +   +    K+        L  +M    +  NV + N LI+  C  N  + +  
Sbjct: 90  RPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVS 149

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M   G+ P+ ++FN ++N LC  GK+ EA  L   M++ G  PN   Y T+++G C
Sbjct: 150 VLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLC 209

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            TG  + A ++F  ME  GCK NV +YS +I+  CK++ +  A+   SEM+ +GI P+V 
Sbjct: 210 KTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVF 269

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN++  G   + Q+  A +LF EM    V  +T  +   +DGLCK G + EA  +F T+
Sbjct: 270 TYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETM 329

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E DI  YN L+DG C    +  A ++F  + R        +YNI+I+  C   +M
Sbjct: 330 TEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRM 389

Query: 357 DKARDLFLDMEAK 369
           D+A+ L  +M  K
Sbjct: 390 DEAKSLLAEMYHK 402



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 101/335 (30%), Positives = 166/335 (49%), Gaps = 41/335 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNVFTYN++++G C  G    A  LF+EM       G    PNTVT+T ++DGLCKE
Sbjct: 263 GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMV------GRDVMPNTVTFTILVDGLCKE 316

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSL-------------------------------- 101
           G V +A+ +F  M ++ + P++ TYN+L                                
Sbjct: 317 GMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSY 376

Query: 102 ---IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
              I+G+C +   +EAK L  EM  + + P+ V+++ +M  LC+ G+  EA  L + M  
Sbjct: 377 NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCS 436

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN   Y  L+DGFC  G ++ A +L  SM+    + N+  Y+ILI G     ++E 
Sbjct: 437 YGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEV 496

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L+S++   G +PD+  Y  +  GL +    + A+ LF +M+  G   ++ +Y   I 
Sbjct: 497 AKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQ 556

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           G  +N     A+ L   +   ++ +++  +  L+D
Sbjct: 557 GFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLLD 591



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 114/221 (51%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A      M++I  RP+   +   +  F    + +    L   M+     HNV+S +I
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN  C+   ++ ++S+  +M   GI PD + +N L  GL    +++ A +LF+EM + G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +  +Y T I+GLCK G    AV++F+ +     + ++  Y+ +ID LCK   +  A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           E    +    +  +V TYN ++H  C  G++++A  LF +M
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEM 294



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 71/152 (46%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ AL+ +  M+    +P VV +        +  Q      L ++M    V  + ++   
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+ LC+  ++  +V +   +  L    D   +N LI+GLC  G++K A ELF  + +  
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +V++Y  +I+ LC  G    A D+F  ME
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKME 225


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  300 bits (769), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 147/372 (39%), Positives = 233/372 (62%), Gaps = 6/372 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LFM ++  GC P+   Y TL+ GLC+TG+   AL L +EM N  G +G+ CKP  +
Sbjct: 244 EATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLI 303

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IIDGLCK+   D+A+ELF +MK + I P+V++Y +LIHGFC +  W +AKCLF EM
Sbjct: 304 SYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 363

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+QP+V + +V+++ LCK GK+ EA++LLE++IQ G  P+     TL+ G C+  R+
Sbjct: 364 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRI 423

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPDV 235
           ++A +LF+ M+ +GC  NV + + L+ G C++  I+ AL L+  MLS     GI  KP+ 
Sbjct: 424 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 483

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + Y+ +  GL +  + + A +LF EM+  GV  D  +Y + I G C++G   +A  LF  
Sbjct: 484 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 543

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + D+  ++ LID LCK G++  A EL   + +   I + VTY  ++  LC + +
Sbjct: 544 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 603

Query: 356 MDKARDLFLDME 367
           + +A  LF+ M+
Sbjct: 604 ISEATQLFMKMQ 615



 Score =  292 bits (748), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 147/372 (39%), Positives = 228/372 (61%), Gaps = 6/372 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LFM ++  GC P+   Y TL+ GLC+TG   +AL+L +EM N   ++G+ CKP  V
Sbjct: 63  EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLV 122

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IIDGLCK+   D+A+ELF +MK + + P+V++Y SLIHGFC +  W +AKCLF EM
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G++ +V + +++++ LCK GK+ EA+ LLE+MIQ G   +   Y+TL+ G C+  R+
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPDV 235
           + A  LF+SM+ +GC+ +  +Y  L+ G C+   I  AL L+ EML+     GI  KP +
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + Y+ +  GL +  + + A +LF EM+  G+  D  +Y T I G C +G   +A  LF  
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + D+   + LID LCK G++  A +L   + +   I DVVT   ++  LC   +
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHR 422

Query: 356 MDKARDLFLDME 367
           + KA  LFL M+
Sbjct: 423 ISKATQLFLKMQ 434



 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 138/336 (41%), Positives = 212/336 (63%), Gaps = 8/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+K++  GC PNV T  TL+ GLC++G+  +AL L + M +    +G+ CKPN +
Sbjct: 425 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 484

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IIDGLCK G  D+A+ELF +MK   + P+V++Y SLIHGFC +  W +AK LF EM
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D GVQP+V +F+V+++ LCK GK+ EA+ LLE+MIQ G  PN   Y TL+ G C+  R+
Sbjct: 545 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 604

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------KGIKPDV 235
           + A +LF+ M+ +GC  +V +Y  L+ G C+   I+ AL L+ +MLS         KPDV
Sbjct: 605 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 664

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + Y+ +  GL +  + + A +LF EM+  GV  +  +Y + I G C++G + +A  LF  
Sbjct: 665 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 724

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           +     +L+   Y+ +I G CK G++  A  LF+ +
Sbjct: 725 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 758



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 136/380 (35%), Positives = 200/380 (52%), Gaps = 20/380 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +   GC P+V T  TL+ GLC       A  LF +M        + C PN 
Sbjct: 389 IEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQK------LGCMPNV 442

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDE------NINPNVVTYNSLIHGFCYANDWNEA 114
           VT  T++ GLC+ G +  A EL   M  +      N  PN ++Y+ +I G C     +EA
Sbjct: 443 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 502

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           + LF EM   GV P+V+S+  +++  C++GK  +A  L   M+ IGV+P+   ++ L+D 
Sbjct: 503 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 562

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C  G+V  A EL   M   GC  N  +Y+ L+ G C N  I  A  L+ +M   G  PD
Sbjct: 563 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 622

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEM----QRHGV--AADTWAYRTFIDGLCKNGYIVE 288
           VV Y TL  GL +   ++ A +L  +M     ++G     D  +Y   IDGLCK+G   E
Sbjct: 623 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 682

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A ELF+ ++ L    ++ +Y  LI G C+SG+L+ A  LF  +    +  + VTY++MIH
Sbjct: 683 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 742

Query: 349 ALCADGKMDKARDLFLDMEA 368
             C +G++DKA  LF  MEA
Sbjct: 743 GFCKEGQIDKA--LFQKMEA 760



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 197/365 (53%), Gaps = 18/365 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V T   LI+  C+ G  I A  L E M          C  + VTY+T+I GLC +
Sbjct: 5   GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRG------CILDIVTYSTLIKGLCMK 58

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ------ 127
             + +A +LF+ MK     P+ + Y +L+ G C     N A  L  EM++   Q      
Sbjct: 59  HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCK 118

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P +VS+++I++ LCK+ + DEA  L + M   G+ P+   Y +L+ GFC +G+  +A+ L
Sbjct: 119 PTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCL 178

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M  +G + +V + S+LI+  CK  ++  A  L   M+ +G   D+V Y+TL  GL  
Sbjct: 179 FNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCM 238

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL------RILKY 301
            H++  A +LF  MQ+ G   D  AY T + GLC+ G I  A++L + +        +K 
Sbjct: 239 KHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC 298

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  + +Y+ +IDGLCK  R   A ELF+ +    ++ DV++Y  +IH  C  GK +KA+ 
Sbjct: 299 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKC 358

Query: 362 LFLDM 366
           LF +M
Sbjct: 359 LFNEM 363



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 147/253 (58%), Gaps = 6/253 (2%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+QP+V +  V+++  CK GK+ EA+ LLE+M+Q G   +   Y+TL+ G C+  R
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPD 234
           ++ A +LF+SM+ +GC+ +  +Y  L+ G C+  +I  AL L+ EML+     GI  KP 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +V Y+ +  GL +  + + A +LF EM+  G+  D  +Y + I G C++G   +A  LF 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +  +    D+   + LID LCK G++  A EL   + +   I D+VTY+ +I  LC   
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 355 KMDKARDLFLDME 367
           ++ +A  LF+ M+
Sbjct: 241 RISEATRLFMSMQ 253


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  300 bits (769), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 153/365 (41%), Positives = 220/365 (60%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G +PNV TY TLINGLC+ G+T  A+ L   M  GN      C+PN V
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVV 211

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++T+ID LCK+  V +A  +F +M  + I+PN+VTYNSLIHG C   +W     L  EM
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + P+V + N +++ LCK G + EA  ++++MI  GV PN   YN LMDG CL   V
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M    C  NV SY+ LINGYCK + ++ A+ L+ EM  + + P+ V YNTL
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D   YRT  D LCKN ++ +A+ L + +    +
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+ Y  ++DG+C++G L+ A +LF +L    L  +V TYNIMIH LC  G + +A  
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 362 LFLDM 366
           LF +M
Sbjct: 512 LFSEM 516



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F ++      P+   +N L+  + +T H    L+L  +M      FG+   P+  
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM----DSFGI--PPDVY 106

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+ LC    VD A     K+      P+  T+ +LI G C      EA  LF +M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVV++  ++N LCK G    A RLL  M Q   +PN  V++TL+D  C   +V
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M + G   N+ +Y+ LI+G CK  E +   +L +EM+   I PDV   NT+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   V  A  + D M   GV  +   Y   +DG C    +  AV++F T+     
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ +YN LI+G CK   +  A  LF  + R  L  + VTYN +IH LC  G++  A  
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 362 LFLDMEAK 369
           LF +M A+
Sbjct: 407 LFHEMVAR 414



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 149/271 (54%), Gaps = 6/271 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPNV TYN L++G C      VA+ +F+ M + +      C  N ++Y T+I+G CK 
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKI 363

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VDKA  LF +M  + + PN VTYN+LIHG C+     +A  LF EM+ +G  P++V++
Sbjct: 364 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             + + LCKN  +D+A  LL+ +      P+  +Y T++DG C  G +  A +LF ++ S
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV++Y+I+I+G CK   +  A  L+SEM   G  P+   YN +  G    ++  R
Sbjct: 484 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 543

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             +L +EM   G + D       +  L  +G
Sbjct: 544 TIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 6/303 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VFT NT+++ LC+ G    A ++ + M +   E      PN VTY  ++DG C    V
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE------PNVVTYNALMDGHCLRNEV 331

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A ++F  M  ++   NV++YN+LI+G+C     ++A  LF EM  Q + PN V++N +
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC  G++ +A  L   M+  G  P+   Y TL D  C    +++A  L  ++E    
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++  Y+ +++G C+  E+E A  L+S + SKG++P+V  YN +  GL +   +  A K
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM ++G + +   Y     G  +N   +  +EL   +    + +D+     L+  L 
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571

Query: 317 KSG 319
             G
Sbjct: 572 DDG 574



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 35/329 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A   F +M  +   P+ V +N L+         +    L  +M   G+ P+V +  +
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC   ++D A   L  ++++G +P+A  + TL+ G C+ G++  A  LF  M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 196 CKHNVFSYSILING-----------------------------------YCKNKEIEGAL 220
            + NV +Y  LING                                    CK++++  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +++SEM++KGI P++V YN+L  GL ++ + +    L +EM    +  D +   T +D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G + EA ++   +     E ++  YN L+DG C    + +A ++F ++     +A+V
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++YN +I+  C    +DKA  LF +M  +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 1/270 (0%)

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           ++N+      + N  +EA   F  M+ +   P+ V FN ++  + K         L   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+ P+ +    +++  C   RV+ A      +  +G + +  +++ LI G C   +I
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             AL L+ +M+ +G +P+VV Y TL  GL ++     A +L   M++     +   + T 
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           ID LCK+  + EA  +F  +       +I  YN LI GLCK    K    L   +    +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + DV T N ++ ALC +G + +A D+ +DM
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDV-VDM 305


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  300 bits (768), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 153/365 (41%), Positives = 220/365 (60%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G +PNV TY TLINGLC+ G+T  A+ L   M  GN      C+PN V
Sbjct: 158 EALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPNVV 211

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++T+ID LCK+  V +A  +F +M  + I+PN+VTYNSLIHG C   +W     L  EM
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEM 271

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + P+V + N +++ LCK G + EA  ++++MI  GV PN   YN LMDG CL   V
Sbjct: 272 VDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEV 331

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M    C  NV SY+ LINGYCK + ++ A+ L+ EM  + + P+ V YNTL
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D   YRT  D LCKN ++ +A+ L + +    +
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+ Y  ++DG+C++G L+ A +LF +L    L  +V TYNIMIH LC  G + +A  
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 362 LFLDM 366
           LF +M
Sbjct: 512 LFSEM 516



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F ++      P+   +N L+  + +T H    L+L  +M      FG+   P+  
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM----DSFGI--PPDVY 106

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+ LC    VD A     K+      P+  T+ +LI G C      EA  LF +M
Sbjct: 107 TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 166

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVV++  ++N LCK G    A RLL  M Q   +PN  V++TL+D  C   +V
Sbjct: 167 IGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQV 226

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M + G   N+ +Y+ LI+G CK  E +   +L +EM+   I PDV   NT+
Sbjct: 227 TEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTV 286

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   V  A  + D M   GV  +   Y   +DG C    +  AV++F T+     
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDC 346

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ +YN LI+G CK   +  A  LF  + R  L  + VTYN +IH LC  G++  A  
Sbjct: 347 VANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAIS 406

Query: 362 LFLDMEAK 369
           LF +M A+
Sbjct: 407 LFHEMVAR 414



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 149/271 (54%), Gaps = 6/271 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPNV TYN L++G C      VA+ +F+ M + +      C  N ++Y T+I+G CK 
Sbjct: 310 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKI 363

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VDKA  LF +M  + + PN VTYN+LIHG C+     +A  LF EM+ +G  P++V++
Sbjct: 364 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 423

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             + + LCKN  +D+A  LL+ +      P+  +Y T++DG C  G +  A +LF ++ S
Sbjct: 424 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 483

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV++Y+I+I+G CK   +  A  L+SEM   G  P+   YN +  G    ++  R
Sbjct: 484 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 543

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             +L +EM   G + D       +  L  +G
Sbjct: 544 TIELLEEMLARGFSVDVSTTTLLVGMLSDDG 574



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 158/303 (52%), Gaps = 6/303 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VFT NT+++ LC+ G    A ++ + M +   E      PN VTY  ++DG C    V
Sbjct: 278 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE------PNVVTYNALMDGHCLRNEV 331

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A ++F  M  ++   NV++YN+LI+G+C     ++A  LF EM  Q + PN V++N +
Sbjct: 332 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 391

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC  G++ +A  L   M+  G  P+   Y TL D  C    +++A  L  ++E    
Sbjct: 392 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 451

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++  Y+ +++G C+  E+E A  L+S + SKG++P+V  YN +  GL +   +  A K
Sbjct: 452 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 511

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM ++G + +   Y     G  +N   +  +EL   +    + +D+     L+  L 
Sbjct: 512 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 571

Query: 317 KSG 319
             G
Sbjct: 572 DDG 574



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 35/329 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A   F +M  +   P+ V +N L+         +    L  +M   G+ P+V +  +
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC   ++D A   L  ++++G +P+A  + TL+ G C+ G++  A  LF  M   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 196 CKHNVFSYSILING-----------------------------------YCKNKEIEGAL 220
            + NV +Y  LING                                    CK++++  A 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +++SEM++KGI P++V YN+L  GL ++ + +    L +EM    +  D +   T +D L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G + EA ++   +     E ++  YN L+DG C    + +A ++F ++     +A+V
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++YN +I+  C    +DKA  LF +M  +
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQ 379



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 127/270 (47%), Gaps = 1/270 (0%)

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           ++N+      + N  +EA   F  M+ +   P+ V FN ++  + K         L   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+ P+ +    +++  C   RV+ A      +  +G + +  +++ LI G C   +I
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             AL L+ +M+ +G +P+VV Y TL  GL ++     A +L   M++     +   + T 
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           ID LCK+  + EA  +F  +       +I  YN LI GLCK    K    L   +    +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + DV T N ++ ALC +G + +A D+ +DM
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDV-VDM 305



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 7/150 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL   +     +P++  Y T+++G+CR G    A +LF  +++         +PN  
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKG------LQPNVW 491

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCK+G + +A +LF +M     +PN  TYN +  GF   N+      L  EM
Sbjct: 492 TYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEM 551

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           + +G   +V +  +++  L  +G +D++ +
Sbjct: 552 LARGFSVDVSTTTLLVGMLSDDG-LDQSVK 580


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  299 bits (766), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 150/367 (40%), Positives = 219/367 (59%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F      GC+P V+TY T+INGLC+ G T  A  LF++M          C+PN V
Sbjct: 183 QAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAG------CQPNVV 236

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LCK+  V++A ++F  MK + I+P++ TYNSLI G C    W EA  L  EM
Sbjct: 237 TYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM 296

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN+ +FNV+++ +CK GK+ EA  + + M ++GV P+   Y++LM G+ L   +
Sbjct: 297 TSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEI 356

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF +M + GCK + FSY+ILI GYCK K I+ A  L++EM+ +G+ PD V YNTL
Sbjct: 357 VEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTL 416

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ ++  A  LF  M  +G   D + Y   +DG CK GY+ +A  LFR ++    
Sbjct: 417 IHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYL 476

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  YN LID +CK G LK A +LF  L    L+ +V  Y  +I+ LC +G +D+A +
Sbjct: 477 KPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALE 536

Query: 362 LFLDMEA 368
            F +ME 
Sbjct: 537 AFRNMEG 543



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 196/364 (53%), Gaps = 6/364 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L  ++ + G  P+++T + LI+         +A ++F +M     + G+  +P+ VT+ 
Sbjct: 116 SLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMI----KLGL--QPDAVTFN 169

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+GLCK G   +A E F   +     P V TY ++I+G C   +   A  LF +M + 
Sbjct: 170 TLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEA 229

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPNVV++N++++ LCK+  ++EA  +   M    + P+ F YN+L+ G C   R   A
Sbjct: 230 GCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEA 289

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M S+    N+F++++L++  CK  ++  A  ++  M   G++PDVV Y++L  G
Sbjct: 290 SALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYG 349

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
                ++  A KLFD M   G   D ++Y   I G CK   I EA +LF  +       D
Sbjct: 350 YSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPD 409

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              YN LI GLC+ GRL+ A +LF+++     + D+ TY++++   C +G + KA  LF 
Sbjct: 410 NVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFR 469

Query: 365 DMEA 368
            M++
Sbjct: 470 VMQS 473



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 196/423 (46%), Gaps = 81/423 (19%)

Query: 17  PNVFTYNTLINGLCRTGH---TIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           P +  +  L++ + + G     +++L+   E+A           P+  T + +ID     
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAG--------LSPDIYTLSILIDCFSHL 143

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFC----------YANDWNEAKC------- 116
             VD A  +F KM    + P+ VT+N+LI+G C          + +D+  + C       
Sbjct: 144 QRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTY 203

Query: 117 ------------------LFIEMMDQGVQPNVVSFNVIMNELCKNG-------------- 144
                             LF +M + G QPNVV++N++++ LCK+               
Sbjct: 204 TTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKA 263

Query: 145 ---------------------KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
                                +  EAS LL  M  + + PN F +N L+D  C  G+V+ 
Sbjct: 264 KRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSE 323

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A+ +F +M  MG + +V +YS L+ GY    EI  A  L+  M++KG KPD   YN L  
Sbjct: 324 AQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIK 383

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G  +  +++ A +LF+EM   G+  D   Y T I GLC+ G + EA +LF+ +       
Sbjct: 384 GYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLP 443

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D+  Y+ L+DG CK G L  A+ LFR +    L  D+  YNI+I A+C  G +  AR LF
Sbjct: 444 DLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLF 503

Query: 364 LDM 366
            ++
Sbjct: 504 SEL 506



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 164/296 (55%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+AL  ++      PN+FT+N L++ +C+ G    A  +F+ M     E GV  +P+ V
Sbjct: 288 EASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMT----EMGV--EPDVV 341

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++ G      + +A++LF  M  +   P+  +YN LI G+C A   +EAK LF EM
Sbjct: 342 TYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEM 401

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ P+ V++N +++ LC+ G++ EA  L + M   G  P+ F Y+ L+DGFC  G +
Sbjct: 402 IHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYL 461

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  M+S   K ++  Y+ILI+  CK   ++ A  L+SE+  +G+ P+V IY T+
Sbjct: 462 GKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
              L +   ++ A + F  M+  G   D ++Y   I G  +      A +L   +R
Sbjct: 522 INNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMR 577



 Score =  157 bits (398), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 138/274 (50%), Gaps = 10/274 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G EP+V TY++L+ G       + A  LF+ M          CKP+  
Sbjct: 323 EAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKG------CKPDAF 376

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I G CK   +D+AK+LF +M  + + P+ V YN+LIHG C      EA+ LF  M
Sbjct: 377 SYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P++ +++++++  CK G + +A RL  +M    ++P+  +YN L+D  C  G +
Sbjct: 437 HSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNL 496

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  +   G   NV  Y+ +IN  CK   ++ AL  +  M   G  PD   YN +
Sbjct: 497 KDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVI 556

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD----TW 271
             G  +     RA +L  EM+  G  A+    TW
Sbjct: 557 IRGFLQYKDESRAAQLIGEMRDRGFVAEAGTTTW 590



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 148/295 (50%), Gaps = 1/295 (0%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-QGVQPNVVSFN 134
           +D A   F  M      P ++ +  L+        +  A     + M+  G+ P++ + +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++++      ++D A  +   MI++G++P+A  +NTL++G C  G+  +A E F   E+ 
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC+  V++Y+ +ING CK  E   A  L+ +M   G +P+VV YN L   L +   V  A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +F  M+   ++ D + Y + I GLC      EA  L   +  L    +I  +N L+D 
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +CK G++  A  +F+++    +  DVVTY+ +++      ++ +AR LF  M  K
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITK 369



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 124/230 (53%), Gaps = 6/230 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   GC+P+ F+YN LI G C+      A  LF EM +          P+ 
Sbjct: 357 VEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG------LTPDN 410

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T+I GLC+ G + +A++LF  M      P++ TY+ L+ GFC      +A  LF  
Sbjct: 411 VNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRV 470

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    ++P++  +N++++ +CK G + +A +L   +   G+ PN  +Y T+++  C  G 
Sbjct: 471 MQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGL 530

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++ A E F +ME  GC  + FSY+++I G+ + K+   A  L  EM  +G
Sbjct: 531 LDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  298 bits (762), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 147/372 (39%), Positives = 234/372 (62%), Gaps = 6/372 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LFM ++  GC P+  TY TL+ GLC+TG+  +AL L +EM N  G +G+ CKP  +
Sbjct: 400 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 459

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IIDGLCK+   D+A+ELF +MK + I P+V++Y +LIHGFC +  W +AKCLF EM
Sbjct: 460 SYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEM 519

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+QP+V + +V+++ LCK GK+ EA++LLE++IQ G   +     TL+ G C+  R+
Sbjct: 520 LDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRI 579

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPDV 235
           ++A +LF+ M+ +GC  NV + + L+ G C++  I+ AL L+  MLS     GI  KP+ 
Sbjct: 580 SKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNA 639

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + Y+ +  GL +  + + A +LF EM+  GV  D  +Y + I G C++G   +A  LF  
Sbjct: 640 ISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 699

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + D+  ++ LID LCK G++  A EL   + +   I + VTY  ++  LC + +
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 759

Query: 356 MDKARDLFLDME 367
           + +A  LF+ M+
Sbjct: 760 ISEATQLFMKMQ 771



 Score =  296 bits (759), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 150/381 (39%), Positives = 232/381 (60%), Gaps = 13/381 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LFM ++  GC P+  TY TL+ GLC+TG+  +AL L +EM N  G +G+ CKP  +
Sbjct: 107 EATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLI 166

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IIDGLCK+   D+A+ELF +MK + + P+V++Y SLIHGFC++  W +AKCLF EM
Sbjct: 167 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEM 226

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+QP+V +  V+++  CK GK+ EA+ LLE+M+  G   +   Y+TL+ G C+  R+
Sbjct: 227 LDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRI 286

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-------KGIKPD 234
           + A +LF+SM+ +GC+ +  +Y  L+ G C+  +I  AL L+ EML+       K I+PD
Sbjct: 287 SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPD 346

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V   + L   L +  +V  A +L + M + G   D   Y T I GLC    I EA  LF 
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 406

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV------LIADVVTYNIMIH 348
           +++ L    D   Y  L+ GLC++G + IA +L + +              +++Y+I+I 
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 466

Query: 349 ALCADGKMDKARDLFLDMEAK 369
            LC D + D+AR+LF +M+A+
Sbjct: 467 GLCKDRREDEARELFEEMKAQ 487



 Score =  277 bits (708), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 138/336 (41%), Positives = 212/336 (63%), Gaps = 8/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+K++  GC PNV T  TL+ GLC++G+  +AL L + M +    +G+ CKPN +
Sbjct: 581 KATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 640

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ IIDGLCK G  D+A+ELF +MK   + P+V++Y SLIHGFC +  W +AK LF EM
Sbjct: 641 SYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 700

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D GVQP+V +F+V+++ LCK GK+ EA+ LLE+MIQ G  PN   Y TL+ G C+  R+
Sbjct: 701 VDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRI 760

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------KGIKPDV 235
           + A +LF+ M+ +GC  +V +Y  L+ G C+   I+ AL L+ +MLS         KPDV
Sbjct: 761 SEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDV 820

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + Y+ +  GL +  + + A +LF EM+  GV  +  +Y + I G C++G + +A  LF  
Sbjct: 821 ISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNE 880

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           +     +L+   Y+ +I G CK G++  A  LF+ +
Sbjct: 881 MVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 914



 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 199/380 (52%), Gaps = 20/380 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +   GC  +V T  TL+ GLC       A  LF +M        + C PN 
Sbjct: 545 IEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQK------LGCMPNV 598

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDE------NINPNVVTYNSLIHGFCYANDWNEA 114
           VT  T++ GLC+ G +  A EL   M  +      N  PN ++Y+ +I G C     +EA
Sbjct: 599 VTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEA 658

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           + LF EM   GV P+V+S+  +++  C++GK  +A  L   M+ IGV+P+   ++ L+D 
Sbjct: 659 RELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDM 718

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C  G+V  A EL   M   GC  N  +Y+ L+ G C N  I  A  L+ +M   G  PD
Sbjct: 719 LCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPD 778

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEM----QRHGV--AADTWAYRTFIDGLCKNGYIVE 288
           VV Y TL  GL +   ++ A +L  +M     ++G     D  +Y   IDGLCK+G   E
Sbjct: 779 VVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDE 838

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A ELF+ ++ L    ++ +Y  LI G C+SG+L+ A  LF  +    +  + VTY++MIH
Sbjct: 839 ARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIH 898

Query: 349 ALCADGKMDKARDLFLDMEA 368
             C +G++DKA  LF  MEA
Sbjct: 899 GFCKEGQIDKA--LFQKMEA 916



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 188/370 (50%), Gaps = 16/370 (4%)

Query: 10  LRVFGCEPNVFTYNTLINGLC---RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           +R+ G  P+ FT+N LIN LC   R    + A+                 +P+  T + +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           ID LCKEG V +A EL   M       ++VTY++LI G C  +  +EA  LF+ M   G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQ------IGVRPNAFVYNTLMDGFCLTGR 180
           +P+ +++  +M  LC+ G ++ A +L + M+       I  +P    Y+ ++DG C   R
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A ELF  M++ G   +V SY+ LI+G+C + + E A  L++EML  GI+PDV     
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +  +V  A +L + M   G   D   Y T I GLC    I EA +LF +++ L 
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-------LIADVVTYNIMIHALCAD 353
              D  AY  L+ GLC++G++ IA  L + +           +  DV T +++I  LC +
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 354 GKMDKARDLF 363
           GK+ +A +L 
Sbjct: 361 GKVIEANELL 370



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/297 (31%), Positives = 159/297 (53%), Gaps = 15/297 (5%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV---------I 136
           M+   + P+  T+N LI+  C     NE       +M +G  P++V++++         +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK GK+ EA+ LLE+MIQ G   +   Y+TL+ G C+  R++ A  LF+SM+ +GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI--KPDVVIYNTLFIGLFEIHQ 250
           + +  +Y  L+ G C+   I  AL L+ EML+     GI  KP ++ Y+ +  GL +  +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
            + A +LF EM+  G+  D  +Y + I G C +G   +A  LF  +  +  + D+     
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LID  CK G++  A EL   +     I D+VTY+ +I  LC   ++ +A  LF+ M+
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 297


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  297 bits (761), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 154/367 (41%), Positives = 221/367 (60%), Gaps = 7/367 (1%)

Query: 2   EAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A  LF KL R   CEPN   Y T++NGL + GHT   L+L   M  GN       KP+ 
Sbjct: 150 DAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGN------TKPDV 203

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY+ +ID LCK+  +D A  L  +MK +NI PN+ TYNSLI G C    W + K L  E
Sbjct: 204 RTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSE 263

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++  + PNV +F+++++ LCK GK+++A  ++  MI+ GV P+   Y+ +MDG+CL G+
Sbjct: 264 MVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQ 323

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+RA  +F  +   G K N+FSYSILINGYCK K +  A+ L+ E+  KG+KPD V Y+T
Sbjct: 324 VDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYST 383

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL E+ ++  A K+FDEM R G   D   + T + G  K G + EA+ LF  L   +
Sbjct: 384 ILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNR 443

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +I  Y  +I+GLCK+ R++ A  +F  LP   LI DV TYN+MI   C +G  D+ +
Sbjct: 444 EDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVK 503

Query: 361 DLFLDME 367
            +   ME
Sbjct: 504 GILRKME 510



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 170/348 (48%), Gaps = 41/348 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  +++     PN+FTYN+LI+GLC+ G       L  EM N N        PN  T
Sbjct: 222 AINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLN------INPNVHT 275

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           ++ +IDGLCKEG V+ A E+   M ++ + P+++TY++++ G+C     + A+ +F  + 
Sbjct: 276 FSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLR 335

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G++PN+ S+++++N  CK   + +A +L   + Q G++P+   Y+T++ G    GR+ 
Sbjct: 336 DKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIG 395

Query: 183 RAEELFVSMESMG-----CKH------------------------------NVFSYSILI 207
            A+++F  M  +G     C H                              N+  Y+++I
Sbjct: 396 DAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVI 455

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG CKN  +  A +++ ++ S G+ PDV  YN +  G       +    +  +M+ +G  
Sbjct: 456 NGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCP 515

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           A+   Y   + G  ++  I E V   + +    +  D      LI+ L
Sbjct: 516 ANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 139/289 (48%), Gaps = 1/289 (0%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF +M      P+V+ ++ L         ++    LF EM   G+  +    N+
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESM 194
           + N  C   ++D A  +L + ++ G+  N   +NTL+ G     +V  A  LF  +    
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
            C+ N   Y  ++NG  K    E  LSL   M     KPDV  Y+ +   L +   ++ A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L +EM++  +  + + Y + IDGLCK G   +   L   +  L    ++  ++ LIDG
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCK G+++ A E+ R +    +  D++TY+ ++   C  G++D+AR +F
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVF 331



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 134/277 (48%), Gaps = 6/277 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP++ TY+ +++G C  G    A  +F  + +         KPN  +Y+ +I+G CK+
Sbjct: 303 GVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKG------IKPNIFSYSILINGYCKK 356

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + KA +LF ++  + + P+ VTY++++HG        +AK +F EM+  G  P++   
Sbjct: 357 KNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLH 416

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++    K G ++EA  L   + +     N   Y  +++G C   RV  A  +F  + S
Sbjct: 417 STLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPS 476

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   +V +Y+++I G+C+    +    +  +M   G   + + YN +  G F  +++  
Sbjct: 477 IGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISE 536

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
                 EM   G + D       I+ L +N  IV+ +
Sbjct: 537 IVSFMKEMAGRGFSFDATTTGVLINVLKENPSIVDMI 573



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 1/259 (0%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF  M+     P+V+ F+ +   +           L   M  +G+  +  + N +
Sbjct: 44  DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
            + +CL  R++ A  +       G   NV +++ L+ G     ++  A+ L+ +++ + I
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 232 -KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            +P+ V+Y T+  GL +    E+   L   M++     D   Y   ID LCK+  +  A+
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            L   ++      +I  YN LIDGLCK G+ +    L   +    +  +V T++I+I  L
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 351 CADGKMDKARDLFLDMEAK 369
           C +GK++ A ++   M  K
Sbjct: 284 CKEGKVEDADEVMRHMIEK 302



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 1/222 (0%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A  L   M+++   P+   ++ L          +    LF  M  +G   +    +I
Sbjct: 43  LDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           + N YC    I+ A S+    L  GI  +VV +NTL  GLF  ++V  A  LF ++ R  
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 266 V-AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           +   +   Y T ++GL K G+  + + L R +     + D+R Y+ +ID LCK   L  A
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             L   + +  +  ++ TYN +I  LC  G+ +K + L  +M
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEM 264


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  297 bits (760), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 154/366 (42%), Positives = 227/366 (62%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G EPNV +YNT+INGLC+TG+T +A+++F++M   NG     CKP+ V
Sbjct: 176 EAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQ-NG-----CKPDVV 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TIID LCK+  V+ A E   +M D  I PNV TYN ++HGFC     NEA  LF EM
Sbjct: 230 TYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEM 289

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V P+ V+  ++++ LCK G + EA  + E M + GV PN   YN LMDG+CL   +
Sbjct: 290 VGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLM 349

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A+++F  M   GC   V SY+ILING+CK++ ++ A SL +EM  K + PD V Y+TL
Sbjct: 350 NEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  + + A  +F EM  +G+  +   Y   +DG CK+G++ EA++L ++++  K 
Sbjct: 410 MQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E +I  +  LI+G+  +G+L++A ELF  L    +   + TY +MI  L  +G  D+A D
Sbjct: 470 EPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYD 529

Query: 362 LFLDME 367
           LF  ME
Sbjct: 530 LFRKME 535



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 195/361 (54%), Gaps = 6/361 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++ +FG   NV++ N LIN LCR  H   A+++  +M      F +   P   T+  +I+
Sbjct: 113 QMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKM------FKLGIHPTASTFNALIN 166

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC EG + +A ELF +M      PNV++YN++I+G C   + + A  +F +M   G +P
Sbjct: 167 GLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKP 226

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +VV++N I++ LCK+  +++A   L  M+  G+ PN F YN ++ GFC+ G++N A  LF
Sbjct: 227 DVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLF 286

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M       +  + +IL++G CK   +  A  ++  M  KG++P++  YN L  G    
Sbjct: 287 KEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQ 346

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             +  A K+F+ M R G A    +Y   I+G CK+  + EA  L   +       D   Y
Sbjct: 347 RLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTY 406

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           + L+ GLC+ GR K A  +F+ +    L+ ++VTY+I++   C  G +D+A  L   M+ 
Sbjct: 407 STLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQE 466

Query: 369 K 369
           K
Sbjct: 467 K 467



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 159/313 (50%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P+   +   +    K+        L  +M    +  NV + N LI+  C  N  + A  
Sbjct: 85  RPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVS 144

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M   G+ P   +FN ++N LC  GK+ EA  L   M++ G  PN   YNT+++G C
Sbjct: 145 ILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLC 204

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            TG  + A ++F  ME  GCK +V +Y+ +I+  CK++ +  A+   SEML +GI P+V 
Sbjct: 205 KTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVF 264

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +  G   + Q+  A +LF EM    V  DT      +DGLCK G + EA  +F T+
Sbjct: 265 TYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETM 324

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E +I  YN L+DG C    +  A ++F  + R      V +YNI+I+  C   +M
Sbjct: 325 TEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRM 384

Query: 357 DKARDLFLDMEAK 369
           D+A+ L  +M  K
Sbjct: 385 DEAKSLLAEMYHK 397



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 166/335 (49%), Gaps = 41/335 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNVFTYN +++G C  G    A  LF+EM       G    P+TVT T ++DGLCKE
Sbjct: 258 GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMV------GRDVMPDTVTLTILVDGLCKE 311

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSL-------------------------------- 101
           G V +A+ +F  M ++ + PN+ TYN+L                                
Sbjct: 312 GMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSY 371

Query: 102 ---IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
              I+GFC +   +EAK L  EM  + + P+ V+++ +M  LC+ G+  EA  + + M  
Sbjct: 372 NILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCS 431

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PN   Y+ L+DGFC  G ++ A +L  SM+    + N+  ++ILI G     ++E 
Sbjct: 432 YGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEV 491

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L+S++ + GI+P +  Y  +  GL +    + A+ LF +M+  G   ++ +Y   I 
Sbjct: 492 AKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQ 551

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           G  +N     A+ L   +   ++  ++  +  L+D
Sbjct: 552 GFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 136/294 (46%), Gaps = 35/294 (11%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M   N  P+V  +   +  F     ++    L  +M   GV  NV S NV
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC+   +D A  +L  M ++G+ P A  +N L                        
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNAL------------------------ 164

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
                      ING C   +I+ A+ L++EM+ +G +P+V+ YNT+  GL +      A 
Sbjct: 165 -----------INGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAV 213

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +F +M+++G   D   Y T ID LCK+  + +A+E    +       ++  YNC++ G 
Sbjct: 214 DVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGF 273

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C  G+L  A  LF+ +    ++ D VT  I++  LC +G + +AR +F  M  K
Sbjct: 274 CILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEK 327


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  296 bits (759), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 147/355 (41%), Positives = 221/355 (62%), Gaps = 6/355 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C+ +VFTY  +I+ LC+ G T  AL++F EM       G    P+ V Y++++DGLC+ G
Sbjct: 142 CKGDVFTYGMIIDSLCKDGMTTEALDMFSEM------IGAGILPDVVVYSSLMDGLCRFG 195

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            + +A E F +M+   I+ +V TYNSLIHG   A  W E       M+D+G  P+  +F 
Sbjct: 196 RLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFT 255

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++++ LCK GK+ EA ++LELM   G  P+   YNTLM+G CL G++  A +LF S+   
Sbjct: 256 ILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR 315

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G K NVFSY+ILINGYCK+++I+ A  L+ EM  KG+KP  V YNTL   L +  +V  A
Sbjct: 316 GIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 375

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            KLF EMQ  G       Y   +DGLCKNG++ EA++LF++++  +++ +I  ++ L+DG
Sbjct: 376 QKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDG 435

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +C++G+L+ AW+ F  + +  L  D + YNI+I+ LC  G + +A  L   ME K
Sbjct: 436 MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 490



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 179/350 (51%), Gaps = 7/350 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  T  TL+ G+        A+ LF+EM    G FG     +  TY  +I+GLCK 
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTE-KGLFG-----DAKTYGILINGLCKA 125

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                A +L  KMK  N   +V TY  +I   C      EA  +F EM+  G+ P+VV +
Sbjct: 126 RKTGLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVY 184

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + +M+ LC+ G++ EA    + M   G+  + + YN+L+ G    G           M  
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   + F+++ILI+G CK  ++  A  +   M  KG +PD++ YNTL  GL  + Q+E 
Sbjct: 245 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLED 304

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KLF+ +   G+  + ++Y   I+G CK+  I EA  LF  +R    +     YN LI 
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIG 364

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            LC+SGR++ A +LF  +        + TY +++  LC +G +++A DLF
Sbjct: 365 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLF 414



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 6/291 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ FT+  LI+GLC+ G    A  + E M +   E      P+ +TY T+++GLC  
Sbjct: 246 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKE------PDILTYNTLMNGLCLV 299

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++ A +LF  + D  I  NV +YN LI+G+C     +EA  LF EM  +G++P+ V++
Sbjct: 300 GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTY 359

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LC++G++  A +L   M   G       Y  L+DG C  G +  A +LF S++ 
Sbjct: 360 NTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKK 419

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              K N+  +SIL++G C+  ++E A   + E+   G++PD + YN L  GL     +  
Sbjct: 420 TEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 479

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           A KL  +M+  G   D+  +   I  L K   I EA++L   +R   +  D
Sbjct: 480 AVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 530



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 127/241 (52%), Gaps = 6/241 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  L   G + NVF+YN LING C+      A  LFEEM           KP+TV
Sbjct: 304 DATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKG------LKPSTV 357

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I  LC+ G V  A++LF++M+       + TY  L+ G C      EA  LF  +
Sbjct: 358 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSI 417

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +PN+  F+++++ +C+ GK++EA +  + + + G+ P+   YN L++G C  G +
Sbjct: 418 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 477

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   ME  GC  +  +++++I    K  EI  A+ L  EM ++   PD  + + L
Sbjct: 478 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537

Query: 242 F 242
            
Sbjct: 538 L 538



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 75/143 (52%), Gaps = 1/143 (0%)

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L +G +PD V   TL  G++  + +  A +LFDEM   G+  D   Y   I+GLCK    
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             A++L   ++    + D+  Y  +ID LCK G    A ++F  +    ++ DVV Y+ +
Sbjct: 129 GLAIKLHEKMKG-NCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 347 IHALCADGKMDKARDLFLDMEAK 369
           +  LC  G++ +A + F +ME +
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGR 210



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F ++   G EP+   YN LINGLC  G    A+ L  +M          C P+++
Sbjct: 444 EAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG------CLPDSI 497

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  II  L KE  + +A +L  +M++ N +P+    + L+    +   W+ A       
Sbjct: 498 TFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNA 557

Query: 122 MDQGV 126
           + +GV
Sbjct: 558 LQKGV 562


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  294 bits (753), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 149/367 (40%), Positives = 223/367 (60%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   GC+P+V+TYNT+INGLC+ G T  A  L ++M          C+PN V
Sbjct: 181 QAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAG------CQPNMV 234

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+ID LC++  V++A ++F  MK + I+P++ TY SLI G C  + W EA  L  EM
Sbjct: 235 TYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEM 294

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P++V+FNV+++  CK GK+ EA  +L+ M ++GV PN   Y++LM G+ L   V
Sbjct: 295 TSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDV 354

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M + GCK N+FSY+ILINGYCK K I+ A+ L++EM+ +G+ P+ V YNTL
Sbjct: 355 VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTL 414

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ ++  A  LF  M  +G   D + Y   +DG CK GY+ +A  LFR ++    
Sbjct: 415 IHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYL 474

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  Y  L+  +CKSG  K A +LF  L    L   V  Y  +I+ LC +G +D+A +
Sbjct: 475 KPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALE 534

Query: 362 LFLDMEA 368
            F +MEA
Sbjct: 535 AFRNMEA 541



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/339 (35%), Positives = 187/339 (55%), Gaps = 6/339 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  ++  G  P++FTY +LI GLC+      A  L  EM + N        P+ V
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLN------IMPDIV 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D  CKEG V +A  +   M +  + PNVVTY+SL++G+    D  EA+ LF  M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +PN+ S+N+++N  CK  ++DEA +L   MI  G+ PN   YNTL+ GFC  G++
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++LF +M + G   ++F+YSIL++G+CK   +  A  L+  M S  +KP++V+Y  L
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTIL 484

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              + +    + A KLF E+   G+      Y T I+GLCK G + EA+E FR +     
Sbjct: 485 VHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGC 544

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
             D  +YN +I GL +      A  L   +     IADV
Sbjct: 545 PPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 185/351 (52%), Gaps = 7/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P +  +  L++ + + G    V ++L ++M        V   PN  T +  ++  C+   
Sbjct: 90  PCIIQFAKLLSAIVKMGQYYDVVISLSKQMEL------VGLSPNIYTLSIFMNCFCQLQR 143

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD    +  K+    + P +VT+ +LI+G C   ++ +A  LF +M+ +G QP+V ++N 
Sbjct: 144 VDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNT 203

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I+N LCK G+   A+ LL+ M + G +PN   Y+TL+D  C    VN A ++F  M++ G
Sbjct: 204 IINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKG 263

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              ++F+Y+ LI G CK    + A +L +EM S  I PD+V +N L     +  +V  A 
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAL 323

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +   M   GV  +   Y + + G      +VEA +LF  +     + +I +YN LI+G 
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           CK+ R+  A +LF  +    L  + V+YN +IH  C  GK+ +A+DLF +M
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM 434



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 168/306 (54%), Gaps = 6/306 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+AL  ++      P++ T+N L++  C+ G    AL + + M     E GV  +PN V
Sbjct: 286 EASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMT----EMGV--EPNVV 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++ G      V +A++LF  M  +   PN+ +YN LI+G+C A   +EA  LF EM
Sbjct: 340 TYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ PN VS+N +++  C+ GK+ EA  L   M   G  P+ F Y+ L+DGFC  G +
Sbjct: 400 IHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYL 459

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF +M+S   K N+  Y+IL++  CK+   + A  L+SE+  +G++P V +Y T+
Sbjct: 460 GKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTI 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   ++ A + F  M+  G   D  +Y   I GL ++     A+ L   +R   +
Sbjct: 520 INGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGF 579

Query: 302 ELDIRA 307
             D+R 
Sbjct: 580 IADVRP 585



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 132/235 (56%), Gaps = 6/235 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   GC+PN+F+YN LING C+      A+ LF EM +          PN 
Sbjct: 355 VEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQG------LTPNN 408

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+I G C+ G + +A++LF  M      P++ TY+ L+ GFC      +A  LF  
Sbjct: 409 VSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRA 468

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    ++PN+V + ++++ +CK+G   +A +L   +   G++P+  +Y T+++G C  G 
Sbjct: 469 MQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGL 528

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           ++ A E F +ME+ GC  +  SY+++I G  ++K+   AL L  EM  +G   DV
Sbjct: 529 LDEALEAFRNMEADGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADV 583



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 1/295 (0%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFN 134
           +D A   F  M      P ++ +  L+        + +      + M+  G+ PN+ + +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           + MN  C+  ++D    +L  +I++G++P    + TL++G C  G   +A ELF  M + 
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC+ +V++Y+ +ING CK  E   A  L  +M   G +P++V Y+TL   L     V  A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +F  M+  G++ D + Y + I GLCK     EA  L   +  L    DI  +N L+D 
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            CK G++  A  + +++    +  +VVTY+ +++       + +AR LF  M  K
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITK 367


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  294 bits (753), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 155/366 (42%), Positives = 216/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G  P+V TY TLINGLC+ G+T  A+ L   M   N      C+PN  
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVF 202

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LCK+  V +A  LF +M  + I+P++ TYNSLIH  C   +W     L  EM
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + P+VVSFN +++ LCK GK+ EA  +++ MIQ GV PN   Y  LMDG CL   +
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M   GC  NV SY+ LINGYCK + I+ A+ L+ EM  + + PD V Y+TL
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM       +   YR  +D LCKN Y+ EA+ L + +     
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+  N  IDG+C++G L+ A +LF +L    L  DV TY+IMI+ LC  G +D+A  
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502

Query: 362 LFLDME 367
           LF +M+
Sbjct: 503 LFREMD 508



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 167/346 (48%), Gaps = 35/346 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+TV +  ++  + K         L  +M    I PN+ T + LI+ FC+ N    A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+  +F  ++  +   GK+ EA  L + MI  G RP+   Y TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G  + A  L  SM    C+ NVF+Y+ +I+  CK++++  A +L+SEM++KGI PD+  
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV---------- 287
           YN+L   L  + + +    L +EM    +  D  ++ T +D LCK G +           
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 288 -------------------------EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
                                    EAV++F T+       ++ +YN LI+G CK  R+ 
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            A  LF  + R  LI D VTY+ +IH LC   ++  A  LF +M A
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 404



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 155/293 (52%), Gaps = 6/293 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G EPNV TY  L++G C       A+ +F+ M          C PN +
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG------CMPNVI 342

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I+G CK   +DKA  LF +M  + + P+ VTY++LIHG C+     +A  LF EM
Sbjct: 343 SYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEM 402

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN+V++ ++++ LCKN  + EA  LL+ +    + P+  V N  +DG C  G +
Sbjct: 403 VACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGEL 462

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF ++ S G + +V++YSI+ING C+   ++ A  L+ EM   G   +  IYNT+
Sbjct: 463 EAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTI 522

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
             G    ++  RA +L  EM   G +AD      F+  L  +G      ++ R
Sbjct: 523 TRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 575



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 159/313 (50%), Gaps = 6/313 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V ++NT+++ LC+ G    A ++ ++M     + GV  +PN VTYT ++DG C    +
Sbjct: 269 PDVVSFNTVVDALCKEGKVTEAHDVVDKMI----QRGV--EPNVVTYTALMDGHCLLSEM 322

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A ++F  M  +   PNV++YN+LI+G+C     ++A  LF EM  Q + P+ V+++ +
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 382

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC   ++ +A  L   M+     PN   Y  L+D  C    +  A  L  ++E    
Sbjct: 383 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 442

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++   +I I+G C+  E+E A  L+S + SKG++PDV  Y+ +  GL     ++ A K
Sbjct: 443 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 502

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM  +G   +   Y T   G  +N     A++L + +    +  D       +  L 
Sbjct: 503 LFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLS 562

Query: 317 KSGRLKIAWELFR 329
             G  +   ++ R
Sbjct: 563 DDGLDQSLKQILR 575



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 141/294 (47%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M      P+ V +N L+         +    L  +M   G+ PN+ + ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  ++++G +P+   + TL+ G  + G++  A  LF  M   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +V +Y  LING CK      A+ L   M+ K  +P+V  YNT+   L +  QV  AF
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++ D + Y + I  LC          L   +   K   D+ ++N ++D L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G++  A ++   + +  +  +VVTY  ++   C   +MD+A  +F  M  K
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK 335



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +     +P++   N  I+G+CR G    A +LF  +++         +P+  
Sbjct: 429 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG------LQPDVW 482

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+GLC+ G +D+A +LF +M +     N   YN++  GF   N+ + A  L  EM
Sbjct: 483 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 542

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           + +G   +  +  + +  L  +G      ++L   +Q
Sbjct: 543 VARGFSADASTMTLFVKMLSDDGLDQSLKQILREFVQ 579


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  294 bits (752), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 151/367 (41%), Positives = 220/367 (59%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G +PNV TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V
Sbjct: 155 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVV 208

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+IID LCK+  V +A  LF KM  + I+P++ TY SLIH  C   +W     L  +M
Sbjct: 209 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 268

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV F+ +++ LCK GK+ EA  ++++MI  GV PN   YN LMDG CL   +
Sbjct: 269 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 328

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M   G   NV SY+ LINGYCK + ++ A  L+ EM  K + P+ V YNTL
Sbjct: 329 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 388

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM  HG   D   YR  +D LCK  ++ EA+ L +T+     
Sbjct: 389 MHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 448

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+ Y  +IDG+C++G L+ A ++F +L    L  +V TY IMI+ LC  G +D+A  
Sbjct: 449 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 508

Query: 362 LFLDMEA 368
           LF++M+ 
Sbjct: 509 LFMEMDG 515



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 186/358 (51%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G  P++FTY +LI+ LC          L  +M N          P+ V
Sbjct: 225 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK------IMPDVV 278

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++T++D LCKEG + +A ++   M    + PNVVTYN+L+ G C  ++ +EA  +F  M
Sbjct: 279 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV+S+N ++N  CK  +MD+A+ L E M Q  + PN   YNTLM G C  GR+
Sbjct: 339 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRL 398

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M + G   ++ +Y IL++  CK   ++ A++L   +    + PD+ IY  +
Sbjct: 399 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 458

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    ++E A  +F  +   G+  +   Y   I+GLC+ G + EA +LF  +     
Sbjct: 459 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 518

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D   YN +  GL ++     A +L + +      ADV T  +++  LC D K+D++
Sbjct: 519 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLDQS 575



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 186/370 (50%), Gaps = 12/370 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++      P+   +N L+  + +T       +L  +M      FG+   P+  
Sbjct: 50  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM----DSFGI--PPDVY 103

Query: 62  TYTTIIDGLC---KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           T   +I+  C   + GF        LK+    + P+  T+ +LI G C      +A  LF
Sbjct: 104 TLNILINSFCHLNRPGFAFSVLAKILKL---GLQPDTATFTTLIRGLCVEGKIGDALHLF 160

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+ +G QPNVV++  ++N LCK G  + A RLL  M Q   +P+  VY +++D  C  
Sbjct: 161 DKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKD 220

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            +V  A  LF  M   G   ++F+Y+ LI+  C   E +   +L ++M++  I PDVVI+
Sbjct: 221 RQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIF 280

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +T+   L +  ++  A  + D M   GV  +   Y   +DG C    + EAV++F T+  
Sbjct: 281 STVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVH 340

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             Y  ++ +YN LI+G CK  R+  A  LF  + +  LI + VTYN ++H LC  G++  
Sbjct: 341 NGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQD 400

Query: 359 ARDLFLDMEA 368
           A  LF +M A
Sbjct: 401 AIALFHEMVA 410



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 149/329 (45%), Gaps = 35/329 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M   +  P+ V +N L+        +     L  +M   G+ P+V + N+
Sbjct: 48  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   +   A  +L  ++++G++P+   + TL+ G C+ G++  A  LF  M   G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV +Y  LING CK      A+ L   M     +PDVV+Y ++   L +  QV  AF
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227

Query: 256 KLFDEMQRHGVAADTWAY-----------------------------------RTFIDGL 280
            LF +M   G++ D + Y                                    T +D L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G I EA ++   + I   E ++  YN L+DG C    +  A ++F ++       +V
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNV 347

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++YN +I+  C   +MDKA  LF +M  K
Sbjct: 348 ISYNTLINGYCKIQRMDKATYLFEEMCQK 376



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 119/254 (46%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P+ V FN ++  + K  +      L   M   G+ P+ +  
Sbjct: 46  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 105

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC   R   A  +   +  +G + +  +++ LI G C   +I  AL L+ +M+ 
Sbjct: 106 NILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 165

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P+VV Y TL  GL ++     A +L   M++     D   Y + ID LCK+  + E
Sbjct: 166 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 225

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  LF  +       DI  Y  LI  LC     K    L   +    ++ DVV ++ ++ 
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 285

Query: 349 ALCADGKMDKARDL 362
           ALC +GK+ +A D+
Sbjct: 286 ALCKEGKITEAHDV 299



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 112/209 (53%), Gaps = 6/209 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TYNTL++GLC  G    A+ LF EM   +G+      P+  TY  ++D LCK+  +
Sbjct: 380 PNTVTYNTLMHGLCHVGRLQDAIALFHEMV-AHGQI-----PDLATYRILLDYLCKKSHL 433

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L   ++  N++P++  Y  +I G C A +   A+ +F  +  +G++PNV ++ ++
Sbjct: 434 DEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIM 493

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LC+ G +DEA++L   M   G  P+   YNT+  G        RA +L   M + G 
Sbjct: 494 INGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGF 553

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSE 225
             +V + ++L+   C +K  +    + SE
Sbjct: 554 SADVSTTTLLVEMLCDDKLDQSVKQILSE 582



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 81/150 (54%), Gaps = 7/150 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +     +P++  Y  +I+G+CR G    A ++F  +++         +PN  
Sbjct: 435 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKG------LRPNVR 488

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I+GLC+ G +D+A +LF++M     +P+  TYN++  G     +   A  L  EM
Sbjct: 489 TYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           + +G   +V +  +++  LC + K+D++ +
Sbjct: 549 LARGFSADVSTTTLLVEMLCDD-KLDQSVK 577


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  293 bits (751), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 153/366 (41%), Positives = 225/366 (61%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF ++   G EP+V TY+T+INGLC+ G T +A+ L ++M          CKPN 
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG------CKPNV 117

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+TIID LCK+  + +A E   +M +  I+PNVVTY+S++HGFC     NEA  LF +
Sbjct: 118 VVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQ 177

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ V P+ V+FN++++ L K G + EA  + E MI+ GV PN   YN LMDG+C   +
Sbjct: 178 MVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQ 237

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A++LF  M   GC  +V SY+ILI G+CK+  I+ A  L +EM  K + PD V Y+T
Sbjct: 238 MDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYST 297

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  + + A KL +EM+ +G+  D   Y   +DGLCK G++ EA EL + ++  K
Sbjct: 298 LMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESK 357

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E +I  Y  LI G+C  G+L+ A ELF +L    +  DVVTY +MI  L   G  ++A 
Sbjct: 358 IEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEAC 417

Query: 361 DLFLDM 366
           +LF DM
Sbjct: 418 ELFRDM 423



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 185/351 (52%), Gaps = 4/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V+T   LIN  C + H       F  + N    F +  +PN VT++T+++GL  +  +
Sbjct: 8   PDVYTLTILINCFCHSNHDHFHF-AFSVLGN---MFKLGLQPNHVTFSTLLNGLSSKAKI 63

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A +LF +M      P+V+TY+++I+G C       A  L  +M ++G +PNVV ++ I
Sbjct: 64  IDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTI 123

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK+  + EA   L  M+  G+ PN   Y++++ GFC  GR N A  LF  M     
Sbjct: 124 IDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNV 183

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +++IL++G  K   I  A  ++  M+ KG++P+V  YN L  G     Q++ A K
Sbjct: 184 MPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQK 243

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF+ M R G A    +Y   I G CK+G I EA  L   +       D   Y+ L+ G C
Sbjct: 244 LFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFC 303

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + GR + A +L   +    L+ D++TY+I++  LC  G +D+A +L   M+
Sbjct: 304 QDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQ 354



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 172/347 (49%), Gaps = 41/347 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     ++   G  PNV TY+++++G C  G +  A +LF++M   N        P+TV
Sbjct: 135 EAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERN------VMPDTV 188

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++DGL KEG + +A+ +F  M ++ + PNV TYN+L+ G+C  +  +EA+ LF  M
Sbjct: 189 TFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM 248

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V S+N+++   CK+G++DEA  LL  M    + P+   Y+TLM GFC  GR 
Sbjct: 249 VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308

Query: 182 NRAEELFVSMESMG---------------CKH--------------------NVFSYSIL 206
             A++L   M S G               CK                     N+F Y+IL
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G C   ++E A  L+S +  KGI+PDVV Y  +  GL +      A +LF +M  HG 
Sbjct: 369 IQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGC 428

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             ++  Y   I G  +NG    A  L   +    +  D   +  L D
Sbjct: 429 LPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD 475



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 157/286 (54%), Gaps = 2/286 (0%)

Query: 86  MKDENINPNVVTYNSLIHGFCYAND--WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN 143
           M   NI P+V T   LI+ FC++N   ++ A  +   M   G+QPN V+F+ ++N L   
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
            K+ +A +L + M+++G  P+   Y+T+++G C  G    A +L   ME  GCK NV  Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +I+  CK+K I  A+   SEM+++GI P+VV Y+++  G   + +   A  LF +M  
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
             V  DT  +   +DGL K G I+EA  +F T+     E ++  YN L+DG C   ++  
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A +LF  + R      V +YNI+I   C  G++D+A+ L  +M  K
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHK 286


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  293 bits (751), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 151/367 (41%), Positives = 217/367 (59%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G +PNV TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V
Sbjct: 144 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVV 197

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+IID LCK+  V +A  LF +M  + I+P++ TY SL+H  C   +W     L  +M
Sbjct: 198 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 257

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV F+ +++ LCK GK+ EA  ++++MIQ GV P+   Y TLMDG CL   +
Sbjct: 258 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 317

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  M   G   +V SY+ LINGYCK  +I+ A+ L+ EM  K   PD   YNTL
Sbjct: 318 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D   Y   +D LCKN ++ EA+ L + +     
Sbjct: 378 MHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNL 437

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI+ YN +IDG+C++G L+ A +LF +L    L   V TYNIMIH LC  G +++A  
Sbjct: 438 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 497

Query: 362 LFLDMEA 368
           LF++M+ 
Sbjct: 498 LFMEMDG 504



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F +L      P++  +  L+  + +  H    L+L  +M +    FGV   PN  
Sbjct: 39  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS----FGV--PPNVY 92

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C    V  A  +  K+      P+  T+ +LI G C      EA  LF +M
Sbjct: 93  TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G QPNVV++  ++N LCK G    A RLL  M Q   +P+  +Y +++D  C   +V
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   ++F+Y+ L++  C   E +   +L ++M++  I PDVVI++T+
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A ++ D M + GV  D   Y T +DG C    + EAV++F  +    +
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y  LI+G CK  ++  A  LF  + R   I D  TYN ++H LC  G++  A  
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 362 LFLDMEAK 369
           LF +M A+
Sbjct: 393 LFHEMVAR 400



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 166/316 (52%), Gaps = 14/316 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+V TY TL++G C       A+ +F+ M            P+ ++YTT+I+G CK 
Sbjct: 296 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG------FAPDVISYTTLINGYCKI 349

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +DKA  LF +M  +   P+  TYN+L+HG C+     +A  LF EM+ +G  P++V++
Sbjct: 350 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTY 409

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++ LCKN  ++EA  LL+ +    + P+  VYN ++DG C  G +  A +LF ++ S
Sbjct: 410 SILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 469

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V++Y+I+I+G CK   +  A  L+ EM      PD   YNT+  G  + ++  R
Sbjct: 470 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 529

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L +EM   G +AD       ++ L  +G  ++    F  L +L    D R Y   I 
Sbjct: 530 AIQLLEEMLARGFSADVSTTTLLVEMLSDDG--LDQSSCFLMLSVLSE--DDRRYFIFI- 584

Query: 314 GLCKSGRLKIAWELFR 329
                G   + WE  R
Sbjct: 585 ---PEGFDLLGWEFMR 597



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 35/326 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F ++   +  P++V +  L+        ++    L  +M   GV PNV + N+
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  ++++G +P+   + TL+ G C+ G++  A  LF  M   G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV +Y  LING CK      A+ L   M     +PDVVIY ++   L +  QV  AF
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 256 KLFDEMQRHGVAADTWAY-----------------------------------RTFIDGL 280
            LF +M   G++ D + Y                                    T +D L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G + EA E+   +     E D+  Y  L+DG C    +  A ++F  + R     DV
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           ++Y  +I+  C   K+DKA  LF +M
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEM 362



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 124/257 (48%), Gaps = 6/257 (2%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNA 165
           N  ++A   F  ++     P++V F  ++  +    KM   S +L L  Q+   GV PN 
Sbjct: 35  NTLDDALSSFNRLLHMHPPPSIVDFAKLLTSI---AKMKHYSTVLSLSTQMDSFGVPPNV 91

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           +  N L++ FC   RV  A  +   +  +G + +  +++ LI G C   +I  AL L+ +
Sbjct: 92  YTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDK 151

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+ +G +P+VV Y TL  GL ++     A +L   M++     D   Y + ID LCK+  
Sbjct: 152 MIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQ 211

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA  LF  +       DI  Y  L+  LC     K    L   +    ++ DVV ++ 
Sbjct: 212 VTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFST 271

Query: 346 MIHALCADGKMDKARDL 362
           ++ ALC +GK+ +A ++
Sbjct: 272 VVDALCKEGKVTEAHEI 288



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 63/152 (41%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ALS ++ +L     P +V +  L   + ++        L  +M   GV  + +    
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+  C    +  A  +   +  L ++ D   +  LI GLC  G++  A  LF  +    
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +VVTY  +I+ LC  G    A  L   ME
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 188


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  293 bits (750), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 146/355 (41%), Positives = 220/355 (61%), Gaps = 6/355 (1%)

Query: 15   CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
            C+ +VFTY  +I+ LC+ G T  AL++F EM       G    P+ V Y++++DGLC+ G
Sbjct: 1081 CKGDVFTYGMIIDALCKDGMTTEALDMFSEM------IGAGILPDVVVYSSLMDGLCRFG 1134

Query: 75   FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
             + +A E F +M+   I+ +V TYNSLIHG   A  W E       M+D+G  P+  +F 
Sbjct: 1135 RLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFT 1194

Query: 135  VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++++ LCK GK+ EA ++LELM   G  P+   YNTLM+G CL G++  A +LF S+   
Sbjct: 1195 ILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADR 1254

Query: 195  GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
            G K NVFSY+ILINGYCK+++I+ A   + EM  KG+KP  V YNTL   L +  +V  A
Sbjct: 1255 GIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTA 1314

Query: 255  FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             KLF EMQ  G       Y   +DGLCKNG++ EA++LF++++  +++ +I  ++ L+DG
Sbjct: 1315 QKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDG 1374

Query: 315  LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +C++G+L+ AW+ F  + +  L  D + YNI+I+ LC  G + +A  L   ME K
Sbjct: 1375 MCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEK 1429



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 177/350 (50%), Gaps = 7/350 (2%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G EP+  T  TL+ G+        A+ LF+EM    G  G     +  TY  +I+GLCK 
Sbjct: 1011 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTK-KGLLG-----DAKTYGILINGLCKA 1064

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                 A +L  KMK  N   +V TY  +I   C      EA  +F EM+  G+ P+VV +
Sbjct: 1065 RKTGLAIKLHEKMKG-NCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY 1123

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            + +M+ LC+ G++ EA    + M   G+  + + YN+L+ G    G           M  
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             G   + F+++ILI+G CK  ++  A  +   M  KG +PD++ YNTL  GL  + Q+E 
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
            A KLF+ +   G+  + ++Y   I+G CK+  I EA   F  +R    +     YN LI 
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIG 1303

Query: 314  GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             LC+SGR++ A +LF  +        + TY +++  LC +G +++A DLF
Sbjct: 1304 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLF 1353



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 152/291 (52%), Gaps = 6/291 (2%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  P+ FT+  LI+GLC+ G    A  + E M +   E      P+ +TY T+++GLC  
Sbjct: 1185 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKE------PDILTYNTLMNGLCLV 1238

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            G ++ A +LF  + D  I  NV +YN LI+G+C     +EA   F EM  +G++P+ V++
Sbjct: 1239 GQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTY 1298

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            N ++  LC++G++  A +L   M   G       Y  L+DG C  G +  A +LF S++ 
Sbjct: 1299 NTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKK 1358

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
               K N+  +SIL++G C+  ++E A   + E+   G++PD + YN L  GL     +  
Sbjct: 1359 TEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSE 1418

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            A KL  +M+  G   D+  +   I  L K   I EA++L   +R   +  D
Sbjct: 1419 AVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPD 1469



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 181/386 (46%), Gaps = 52/386 (13%)

Query: 35   TIVALNLFEEMANGNGEFGVV-------------CK---PNTVTYTTIIDGLCKEGFVDK 78
            T  +L+ FE        FG++             C    P T T+  ++  + K G+   
Sbjct: 905  TKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYST 964

Query: 79   AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
               ++ K+ D  I P++ T N LIH  C          +F   + +G +P+ V+   ++ 
Sbjct: 965  VFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVK 1024

Query: 139  ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
             +     + +A +L + M + G+  +A  Y  L++G C   +   A +L   M+   CK 
Sbjct: 1025 GVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCKG 1083

Query: 199  NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
            +VF+Y ++I+  CK+     AL ++SEM+  GI PDVV+Y++L  GL    +++ A + F
Sbjct: 1084 DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFF 1143

Query: 259  DEMQRHGVAADTWAYRT-----------------------------------FIDGLCKN 283
             EM+  G++AD + Y +                                    IDGLCK 
Sbjct: 1144 KEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKE 1203

Query: 284  GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
            G + EA ++   +R    E DI  YN L++GLC  G+L+ A +LF SL    +  +V +Y
Sbjct: 1204 GKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSY 1263

Query: 344  NIMIHALCADGKMDKARDLFLDMEAK 369
            NI+I+  C D K+D+A   F +M  K
Sbjct: 1264 NILINGYCKDQKIDEAFRFFEEMRPK 1289



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 134/276 (48%), Gaps = 41/276 (14%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  +   +R  G EP++ TYNTL+NGLC  G    A  LFE +A+         K N  
Sbjct: 1208 EAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRG------IKLNVF 1261

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +Y  +I+G CK+  +D+A   F +M+ + + P+ VTYN+LI   C +     A+ LF+EM
Sbjct: 1262 SYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 1321

Query: 122  MDQGV-----------------------------------QPNVVSFNVIMNELCKNGKM 146
               G                                    +PN+  F+++++ +C+ GK+
Sbjct: 1322 QTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKL 1381

Query: 147  DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +EA +  + + + G+ P+   YN L++G C  G ++ A +L   ME  GC  +  +++++
Sbjct: 1382 EEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVI 1441

Query: 207  INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            I    K  EI  A+ L  EM ++   PD  + + L 
Sbjct: 1442 IQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 122/247 (49%), Gaps = 3/247 (1%)

Query: 125  GVQPNVVSFNVIMNELCKNG--KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            G + ++  F   + + C+ G  K+++A +L +  +     P    +N L+      G  +
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
                ++  +  +G + ++++ +ILI+  C  + +     ++   L +G +PD V   TL 
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             G++  + +  A +LFDEM + G+  D   Y   I+GLCK      A++L   ++    +
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCK 1082

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             D+  Y  +ID LCK G    A ++F  +    ++ DVV Y+ ++  LC  G++ +A + 
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142

Query: 363  FLDMEAK 369
            F +ME +
Sbjct: 1143 FKEMEGR 1149



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA   F ++   G EP+   YN LINGLC  G    A+ L  +M          C P+++
Sbjct: 1383 EAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG------CLPDSI 1436

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            T+  II  L KE  + +A +L  +M++ N +P+    + L+    +   W+ A       
Sbjct: 1437 TFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLASFDPQWHAALVSLPNA 1496

Query: 122  MDQGV 126
            + +GV
Sbjct: 1497 LQKGV 1501


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  292 bits (748), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 157/357 (43%), Positives = 220/357 (61%), Gaps = 12/357 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TY +LI GLC       A  LF  M        + C PN VTY T+I GLC+ G +
Sbjct: 159 PDVVTYTSLIKGLCMEHRISEATRLFIRMQK------LGCWPNVVTYGTLIKGLCRTGNI 212

Query: 77  DKAKELFLKMKDE------NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           + A +L  +M +       N  PN+ +YN +I   C    W EAK LF EM+DQGV+P+V
Sbjct: 213 NLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDV 272

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V+F+ +++ LCK G + EA + LE M+  G+ P+ F + +L++GFCL G ++ A+ELF+S
Sbjct: 273 VTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLS 332

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M S G + +V SY++LI GYCK   +E A+ LY+EML  G  PD+  +  L  GLF   +
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V  A KLF  ++ H V  + +    F+DGLCKNG + EA+ELF  L+    +LDI ++NC
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNC 452

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LIDGLCK+ +L+ AWELF  L +  L  DVVTY IMI+  C +G++D A  LF  ME
Sbjct: 453 LIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMME 509



 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 207/397 (52%), Gaps = 35/397 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF++++  GC PNV TY TLI GLCRTG+  +AL L +EM NG   + + CKPN  
Sbjct: 179 EATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIF 238

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN---------------------- 99
           +Y  IID LCK G   +AK LF +M D+ + P+VVT++                      
Sbjct: 239 SYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETM 298

Query: 100 -------------SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                        SLI GFC   D + AK LF+ M  +G +P+V+S+ V++   CK   +
Sbjct: 299 MLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNV 358

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           +EA +L   M+++G  P+   +  L+ G  L G+V  A++LF  ++      N++  S+ 
Sbjct: 359 EEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVF 418

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CKN  +  A+ L++E+ S  +K D+  +N L  GL +  ++E A++LF+++ + G+
Sbjct: 419 LDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGL 478

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y   I+G CKNG +  A  LF+ +       ++  Y+ L+ G  K+ +L+   +
Sbjct: 479 QPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVK 538

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L   + +  +      Y I+   +  D K  +  D+ 
Sbjct: 539 LLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDIL 575



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/311 (30%), Positives = 162/311 (52%), Gaps = 6/311 (1%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           + +++  ++  L K     +   L+ KM    ++PN  T N LI+  C  N   E     
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             +M +G  P+VV++  ++  LC   ++ EA+RL   M ++G  PN   Y TL+ G C T
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 179 GRVNRAEELFVSM------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           G +N A +L   M       ++ CK N+FSY+I+I+  CK  + + A  L++EM+ +G++
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PDVV ++ L   L +   V  A K  + M   G+  D + + + I+G C  G +  A EL
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F ++    YE D+ +Y  LI G CK+  ++ A +L+  + R     D+ T+ +++  L  
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFL 389

Query: 353 DGKMDKARDLF 363
            GK+  A+ LF
Sbjct: 390 AGKVGDAKKLF 400



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 146/279 (52%), Gaps = 6/279 (2%)

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           +++++N L+        +++   L+ +M   G+ PN  + N+++N LC   ++ E    +
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             +++ G  P+   Y +L+ G C+  R++ A  LF+ M+ +GC  NV +Y  LI G C+ 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRT 209

Query: 214 KEIEGALSLYSEMLSK------GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
             I  AL L+ EML+         KP++  YN +   L +I + + A +LF+EM   GV 
Sbjct: 210 GNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVR 269

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   +   ID LCK G ++EA +   T+ +     D+  +  LI+G C  G L  A EL
Sbjct: 270 PDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKEL 329

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           F S+P      DV++Y ++I+  C    +++A  L+ +M
Sbjct: 330 FLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM 368


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  291 bits (746), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 151/367 (41%), Positives = 217/367 (59%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G +PNV TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V
Sbjct: 153 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVV 206

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+IID LCK+  V +A  LF +M  + I+P++ TY SL+H  C   +W     L  +M
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 266

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV F+ +++ LCK GK+ EA  ++++MIQ GV P+   Y TLMDG CL   +
Sbjct: 267 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 326

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  M   G   +V SY+ LINGYCK  +I+ A+ L+ EM  K   PD   YNTL
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D   Y   +D LCKN ++ EA+ L + +     
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI+ YN +IDG+C++G L+ A +LF +L    L   V TYNIMIH LC  G +++A  
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506

Query: 362 LFLDMEA 368
           LF++M+ 
Sbjct: 507 LFMEMDG 513



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F +L      P++  +  L+  + +  H    L+L  +M +    FGV   PN  
Sbjct: 48  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDS----FGV--PPNVY 101

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C    V  A  +  K+      P+  T+ +LI G C      EA  LF +M
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G QPNVV++  ++N LCK G    A RLL  M Q   +P+  +Y +++D  C   +V
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   ++F+Y+ L++  C   E +   +L ++M++  I PDVVI++T+
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A ++ D M + GV  D   Y T +DG C    + EAV++F  +    +
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 341

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y  LI+G CK  ++  A  LF  + R   I D  TYN +++ LC  G++  A  
Sbjct: 342 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIA 401

Query: 362 LFLDMEAK 369
           LF +M A+
Sbjct: 402 LFHEMVAR 409



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 147/257 (57%), Gaps = 6/257 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+V TY TL++G C       A+ +F+ M            P+ ++YTT+I+G CK 
Sbjct: 305 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG------FAPDVISYTTLINGYCKI 358

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +DKA  LF +M  +   P+  TYN+L++G C+     +A  LF EM+ +G  P++V++
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++ LCKN  ++EA  LL+ +    + P+  VYN ++DG C  G +  A +LF ++ S
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V++Y+I+I+G CK   +  A  L+ EM      PD   YNT+  G  + ++  R
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLR 538

Query: 254 AFKLFDEMQRHGVAADT 270
           A +L +EM   G +AD+
Sbjct: 539 AIQLLEEMLARGFSADS 555



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 149/288 (51%), Gaps = 6/288 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  ++T+++ LC+ G    A  + + M     E      P+ VTYTT++DG C +  +
Sbjct: 273 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE------PDVVTYTTLMDGHCLQSEM 326

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A ++F  M  +   P+V++Y +LI+G+C  +  ++A  LF EM  +   P+  ++N +
Sbjct: 327 DEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTL 386

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           M  LC  G++ +A  L   M+  G  P+   Y+ L+D  C    +  A  L  ++E+   
Sbjct: 387 MYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNL 446

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++  Y+I+I+G C+  E+E A  L+S + SKG+ P V  YN +  GL +   +  A K
Sbjct: 447 NPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANK 506

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           LF EM  +  + D   Y T   G  +N   + A++L   +    +  D
Sbjct: 507 LFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSAD 554



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 146/326 (44%), Gaps = 35/326 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F ++   +  P++V +  L+        ++    L  +M   GV PNV + N+
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  ++++G +P+   + TL+ G C+ G++  A  LF  M   G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV +Y  LING CK      A+ L   M     +PDVVIY ++   L +  QV  AF
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 256 KLFDEMQRHGVAADTWAY-----------------------------------RTFIDGL 280
            LF +M   G++ D + Y                                    T +D L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G + EA E+   +     E D+  Y  L+DG C    +  A ++F  + R     DV
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           ++Y  +I+  C   K+DKA  LF +M
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEM 371



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 137/283 (48%), Gaps = 11/283 (3%)

Query: 91  INPNVVTYNSLIHGF----CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           ++P +  ++S  + F     + N  ++A   F  ++     P++V F  ++  + K   M
Sbjct: 22  LSPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAK---M 78

Query: 147 DEASRLLELMIQI---GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
              S +L L  Q+   GV PN +  N L++ FC   RV  A  +   +  +G + +  ++
Sbjct: 79  KHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTF 138

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI G C   +I  AL L+ +M+ +G +P+VV Y TL  GL ++     A +L   M++
Sbjct: 139 TTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQ 198

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
                D   Y + ID LCK+  + EA  LF  +       DI  Y  L+  LC     K 
Sbjct: 199 GNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKH 258

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L   +    ++ DVV ++ ++ ALC +GK+ +A ++ +DM
Sbjct: 259 VTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEI-VDM 300



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 63/152 (41%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ALS ++ +L     P +V +  L   + ++        L  +M   GV  + +    
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+  C    +  A  +   +  L ++ D   +  LI GLC  G++  A  LF  +    
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +VVTY  +I+ LC  G    A  L   ME
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 197


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  291 bits (745), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 149/366 (40%), Positives = 222/366 (60%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   GC P+V+TY T+INGLC+ G T  A  L ++M          C+PN V
Sbjct: 186 QAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG------CQPNVV 239

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+TIID   K+  V++A ++F  MK + I+P++ TYNSLI G C  + W EA  L  EM
Sbjct: 240 TYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM 299

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P++V+FNV+++ +CK GK+ EA  +L+ M ++GV P+   Y++LM G+ L   V
Sbjct: 300 RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEV 359

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF +M + GCK +VFSY+ILINGYCK K I+ A  L++EM+ +G+ P+ V YNTL
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTL 419

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++  +  A  LF  M  +G   + + Y   +DG CK GY  +A  LFR ++    
Sbjct: 420 IHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYS 479

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  YN LID +CKSG L+ A +LF  L    L  +   Y  +I+ LC +G +D+A +
Sbjct: 480 KPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALE 539

Query: 362 LFLDME 367
            F +ME
Sbjct: 540 AFRNME 545



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 164/296 (55%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+AL  ++R     P++ T+N L++ +C+ G    A  + + M     E GV  +P+ V
Sbjct: 291 EASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMT----EMGV--EPDVV 344

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++ G      V +A++LF  M  +   P+V +YN LI+G+C     +EAK LF EM
Sbjct: 345 TYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEM 404

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ PN VS+N +++ LC+ G + EA  L + M   G  PN F Y+ L+DGFC  G  
Sbjct: 405 IHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYF 464

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF +M+S   K N+  Y+ILI+  CK+  +  A  L+SE+  KG++P+  IY T+
Sbjct: 465 GKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTI 524

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             GL +   ++ A + F  M+  G   D  +Y   I G   +     AV+L   +R
Sbjct: 525 INGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMR 580



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 171/347 (49%), Gaps = 36/347 (10%)

Query: 58  PNTVTYTTIIDGLCKEG-FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           P  + +T ++  + K G + D    L  +M+   ++PN+ T + LI+ F +    + A  
Sbjct: 95  PCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFS 154

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +++  G+QP +V+F  ++N LCK GK  +A  L + M+  G RP+ + Y T+++G C
Sbjct: 155 VLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLC 214

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G    A  L   ME  GC+ NV +YS +I+ + K++ +  AL ++S M  KGI PD+ 
Sbjct: 215 KIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIF 274

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN+L  GL    Q + A  L +EM+   +  D   +   +D +CK G + EA  + +T+
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334

Query: 297 RILKYELDIR-----------------------------------AYNCLIDGLCKSGRL 321
             +  E D+                                    +YN LI+G CK  R+
Sbjct: 335 TEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRI 394

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             A +LF  +    L  + V+YN +IH LC  G + +AR+LF +M  
Sbjct: 395 DEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/235 (36%), Positives = 133/235 (56%), Gaps = 6/235 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   GC+P+VF+YN LING C+      A  LF EM +          PN 
Sbjct: 360 VEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQG------LTPNN 413

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+I GLC+ G + +A+ LF  M      PN+ TY+ L+ GFC    + +A  LF  
Sbjct: 414 VSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRA 473

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M     +PN+V +N++++ +CK+G + +A +L   +   G++PNA +Y T+++G C  G 
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           ++ A E F +ME  GC  +  SY+++I G+  +K+   A+ L  EM  KG   DV
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADV 588



 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 150/303 (49%), Gaps = 1/303 (0%)

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-QGV 126
           D  C    +D A   F  M      P ++ +  L+        + +      + M+  G+
Sbjct: 70  DDACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGL 129

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            PN+ + ++++N      ++D A  +L  +I++G++P    + TL++  C  G+  +A E
Sbjct: 130 SPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAME 189

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           LF  M + GC+ +V++Y+ +ING CK  E   A  L  +M   G +P+VV Y+T+     
Sbjct: 190 LFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHR 249

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  +V  A  +F  M+  G++ D + Y + I GLC      EA  L   +R L    DI 
Sbjct: 250 KDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIV 309

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +N L+D +CK G++  A  + +++    +  DVVTY+ +++      ++ +AR LF  M
Sbjct: 310 TFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAM 369

Query: 367 EAK 369
             K
Sbjct: 370 ITK 372



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 6/96 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF +L V G +PN   Y T+INGLC+ G    AL  F  M          C P+ +
Sbjct: 501 DARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDG------CPPDEI 554

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           +Y  II G        +A +L  +M+D+    +V T
Sbjct: 555 SYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  291 bits (744), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 148/367 (40%), Positives = 220/367 (59%), Gaps = 7/367 (1%)

Query: 2   EAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A  LF KL R   CEPN   Y T++NGLC+ GHT  A +L   M  G+       KPNT
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNT 213

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TYT +ID  CK+G +D A  L  +MK ++I P++ TY++LI   C  + W   + LF+E
Sbjct: 214 RTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLE 273

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   + PNV +FN +++ LCK GK+++A  ++  MI+ GV P+   YN ++DG+ L G+
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+RA E+F SM +   + ++ SY+ILINGY + K+I+ A+ +  E+  KG+KP +V  N 
Sbjct: 334 VDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GLFE+ + + A   FDEM   G   D + + T + G  KNG + EA+  F  L   +
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +I+ Y  +IDGLCK+G+L  A   F  LP   L  DV+TY  MI   C +G +D+A+
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 361 DLFLDME 367
           D+   ME
Sbjct: 514 DMLRKME 520



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 163/313 (52%), Gaps = 3/313 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCL 117
           N VT+TT+I GL  E  V  A  LF K+  ENI  PN V Y ++++G C      +A  L
Sbjct: 141 NEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDL 200

Query: 118 FIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            + +M+QG  +PN  ++ ++++  CK+G +D A+ LL  M Q  + P+ F Y+TL+D  C
Sbjct: 201 -LRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALC 259

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              +      LF+ M  +    NV +++ +I+G CK  ++E A  +   M+ KG+ PDV+
Sbjct: 260 KLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVI 319

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +  G     QV+RA ++FD M    +  D  +Y   I+G  +   I EA+++ R +
Sbjct: 320 TYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREI 379

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                +  I   N L+ GL + GR K A   F  +     I D+ T+  ++     +G +
Sbjct: 380 SQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLV 439

Query: 357 DKARDLFLDMEAK 369
           ++A   F  +E +
Sbjct: 440 EEAMSHFHKLERR 452



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 172/360 (47%), Gaps = 43/360 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +++     P++FTY+TLI+ LC+         LF EM + N        PN  T
Sbjct: 232 ATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLN------IYPNVCT 285

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + ++IDGLCKEG V+ A+E+   M ++ ++P+V+TYN +I G+      + A+ +F  M+
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMI 345

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ ++P+++S+N+++N   +  K+DEA ++   + Q G++P+    N L+ G    GR  
Sbjct: 346 NKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTK 405

Query: 183 RAEELFVSMESMGCKHNVFS-----------------------------------YSILI 207
            A+  F  M S G   ++++                                   Y+ +I
Sbjct: 406 SAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVI 465

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G CKN +++ A + + ++   G+ PDV+ Y  +  G  +   ++ A  +  +M+ +G  
Sbjct: 466 DGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCL 525

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL--KIAW 325
           AD   Y   + G  ++  + E       +    +  +      L+D + +   +  K+ W
Sbjct: 526 ADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSITRKMHW 585



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 142/342 (41%), Gaps = 77/342 (22%)

Query: 105 FCYANDWNEAKCL------FIEMMDQGVQPNVVSF------------------------- 133
           F  +N++   KCL      F +M+     P+V SF                         
Sbjct: 41  FGVSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHK 100

Query: 134 ----------NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL------------ 171
                     ++++N  C   + D    +L +  + G+  N   + TL            
Sbjct: 101 LRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKD 160

Query: 172 ------------------------MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
                                   M+G C  G   +A +L   ME    K N  +Y+I+I
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVI 220

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           + +CK+  ++GA SL +EM  K I PD+  Y+TL   L ++ Q E    LF EM    + 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +   + + IDGLCK G + +A E+ R +     + D+  YN +IDG    G++  A E+
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREI 340

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F S+    +  D+++YNI+I+      K+D+A  +  ++  K
Sbjct: 341 FDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK 382



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 77/156 (49%), Gaps = 6/156 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F KL     + N+  Y  +I+GLC+ G    A   FE++        +   P+ +
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP------LIGLHPDVI 494

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G C+EG +D+AK++  KM+D     +  TYN ++ GF  +N  +E K    E+
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
             +       +  ++M+ + ++  +      ++L I
Sbjct: 555 AGKSFSFEAATVELLMDIIAEDPSITRKMHWIKLHI 590


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  290 bits (741), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 151/366 (41%), Positives = 215/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K    G +P+V TY TL+NGLC+ G+T  A+ L   M   N      C+PN +
Sbjct: 238 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVI 291

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LCK+  V +A  LF +M  + I+P++ TYNSLIH  C   +W     L  EM
Sbjct: 292 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 351

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + PNVV F+ +++ LCK G +  A  ++++MI+ GV P+   Y  LMDG CL   +
Sbjct: 352 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M   GC  NV SY+ILINGYC+ + ++ A+ L  +M  +G+  D V YNTL
Sbjct: 412 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D   YR  +D LCKN ++ EA+ L + +     
Sbjct: 472 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 531

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  YN  IDG+C++G L+ A +LF +L    L  DV TYNIMIH LC  G +D+A  
Sbjct: 532 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 591

Query: 362 LFLDME 367
           LF  M+
Sbjct: 592 LFRKMD 597



 Score =  182 bits (463), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/347 (30%), Positives = 167/347 (48%), Gaps = 35/347 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+TV +T ++  + K         L  +M    I P+V T N LI+ FC+      A  +
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+  +FN ++  LC  GK+ EA  L +  I  G +P+   Y TLM+G C 
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G  + A  L  SM    C+ NV +Y+ +I+  CK++++  A +L+SEM++KGI PD+  
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV---------- 287
           YN+L   L  + + +    L +EM    +  +   + T +D LCK G I           
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 288 -------------------------EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
                                    EAV++F T+       ++R+YN LI+G C+  R+ 
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  L   +    LIAD VTYN +IH LC  G++  A  LF +M A 
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 494



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 171/363 (47%), Gaps = 32/363 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  LF ++   G  P++FTYN+LI+ LC          L  EM N      VV      
Sbjct: 308 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVV 367

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                    P+ VTYT ++DG C    +D+A ++F  M  +   
Sbjct: 368 DALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV 427

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNV +YN LI+G+C     ++A  L  +M  QG+  + V++N +++ LC  G++  A  L
Sbjct: 428 PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIAL 487

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M+  G  P+   Y  L+D  C    +  A  L  ++E      ++  Y+I I+G C+
Sbjct: 488 FHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCR 547

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E+E A  L+S + SKG++PDV  YN +  GL +   ++ A KLF +M  +G + D   
Sbjct: 548 AGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCI 607

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T I G  ++     A +L + +    +  D+     +++ L   G L  ++E  R   
Sbjct: 608 YNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEMLSDDG-LDQSFERLRL-- 664

Query: 333 RGV 335
           RGV
Sbjct: 665 RGV 667



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 143/294 (48%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M   +  P+ V +  L+        ++    L  +M   G+ P+V + N+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  ++++G +P+   +NTL+ G C+ G++  A  LF      G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +V +Y  L+NG CK      A+ L   M+ K  +P+V+ YNT+   L +  QV  AF
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++ D + Y + I  LC          L   +   K   ++  ++ ++D L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G + IA ++   + +  +  DVVTY  ++   C   +MD+A  +F  M  K
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 424



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 7/264 (2%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNA 165
           N  ++A   F  M+     P+ V F  ++  +    KM   S +L L  Q+   G+ P+ 
Sbjct: 129 NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDV 185

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           +  N L++ FC   R+  A  +   +  +GC+ +  +++ LI G C   +I  AL L+ +
Sbjct: 186 YTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDK 245

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
            + +G +PDVV Y TL  GL ++     A +L   M +     +  AY T ID LCK+  
Sbjct: 246 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 305

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA  LF  +       DI  YN LI  LC     K    L   +    ++ +VV ++ 
Sbjct: 306 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 365

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           ++ ALC +G +  A D+ +DM  K
Sbjct: 366 VVDALCKEGMIAIAHDV-VDMMIK 388


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  289 bits (740), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/367 (40%), Positives = 219/367 (59%), Gaps = 7/367 (1%)

Query: 2   EAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A  LF KL R   CEPN   Y T++NGLC+ GHT  A +L   M  G+       KPNT
Sbjct: 160 DAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGS------TKPNT 213

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y+ +ID  CK+G +D A  L  +MK ++I P++ TY++LI   C  + W   + LF+E
Sbjct: 214 CIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLE 273

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   + PNV +FN +++ LCK GK+++A  ++  MI+ GV P+   YN ++DG+ L G+
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+RA E+F SM +   + N+ SY+ILINGY + K+I+ A+ +  E+  KG+KP +V  N 
Sbjct: 334 VDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNV 393

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GLFE+ + + A   FDEM   G   D + + T + G  KNG + EA+  F  L   +
Sbjct: 394 LLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +I+ Y  +IDGLCK+G+L  A   F  LP   L  DV+TY  MI   C +G +D+A+
Sbjct: 454 EDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 361 DLFLDME 367
           D+   ME
Sbjct: 514 DMLRKME 520



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 188/399 (47%), Gaps = 32/399 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE----------------- 44
           +A +LF ++      P+V +++ L+  L    H    ++LF E                 
Sbjct: 55  DAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVV 114

Query: 45  -----MANGNGEFGVVC-------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI- 91
                M   +  F V+          N V + T++ GL  E  V  A  LF K+  ENI 
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENIC 174

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEAS 150
            PN V Y ++++G C      +A  L + +M+QG  +PN   ++++++  CK+G +D A+
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDL-LRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGAT 233

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            LL  M Q  + P+ F Y+TL+D  C   +      LF+ M  +    NV +++ +I+G 
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  ++E A  +   M+ KG+ PDV+ YN +  G     QV+RA ++FD M    +  + 
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI 353

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
            +Y   I+G  +   I EA+++ R +     +  I   N L+ GL + GR K A   F  
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +     I D+ T+  ++     +G +++A   F  +E +
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 153/284 (53%), Gaps = 6/284 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            LF+++      PNV T+N++I+GLC+ G    A    EE+     E GV   P+ +TY 
Sbjct: 269 TLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDA----EEIMRYMIEKGV--DPDVITYN 322

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            IIDG    G VD+A+E+F  M +++I PN+++YN LI+G+      +EA  +  E+  +
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQK 382

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++P++V+ NV+++ L + G+   A    + M+  G  P+ + + TL+ G+   G V  A
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F  +E      N+  Y+ +I+G CKN +++ A + + ++   G+ PDV+ Y  +  G
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             +   ++ A  +  +M+ +G  AD   Y   + G  ++  + E
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSE 546



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 36/330 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF +M      P+VV+++ L+    +   ++    LF E+    +  +    ++
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL------------------------ 171
           ++N  C   + D    +L +  + G+  N  ++NTL                        
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 172 ------------MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
                       M+G C  G   +A +L   ME    K N   YSI+I+ +CK+  ++GA
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
            SL +EM  K I PD+  Y+TL   L ++ Q E    LF EM    +  +   + + IDG
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDG 292

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           LCK G + +A E+ R +     + D+  YN +IDG    G++  A E+F S+    +  +
Sbjct: 293 LCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPN 352

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +++YNI+I+      K+D+A  +  ++  K
Sbjct: 353 IISYNILINGYARQKKIDEAMQVCREISQK 382



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 6/145 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F KL     + N+  Y  +I+GLC+ G    A   FE++        +   P+ +
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP------LIGLHPDVI 494

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G C+EG +D+AK++  KM+D     +  TYN ++ GF  +N  +E K    E+
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKM 146
             +       +  ++M+ + ++  +
Sbjct: 555 AGKSFSFEAATVELLMDIIAEDPSL 579


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  289 bits (739), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 148/366 (40%), Positives = 221/366 (60%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   GC+P+V+TY T+INGLC+ G T  A  L ++M    GE G  C+P+ V
Sbjct: 179 QALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM----GEVG--CQPDVV 232

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+ID LCK+  V++A ++F  MK + I+P VV+Y SLI G C  + W EA  +  EM
Sbjct: 233 TYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEM 292

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P++V+F+++++  CK G + EA  +L+ M ++GV PN   YN+LM G+ L   V
Sbjct: 293 TSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEV 352

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M + GCK +VFSYSILINGYC  K I+ A  L++EM+ +G+ P+ V Y TL
Sbjct: 353 VEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTL 412

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                ++ ++  A +LF +M  +G   D   Y   ++G CK GY+ +A  LFR ++    
Sbjct: 413 IHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYL 472

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  Y  LID +CKSG L  A +LF  L    L  DV  Y  +I+ LC +G +D+A +
Sbjct: 473 KPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALE 532

Query: 362 LFLDME 367
            F  ME
Sbjct: 533 AFRKME 538



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 180/355 (50%), Gaps = 11/355 (3%)

Query: 17  PNVFTYNTLINGLCRTGH---TIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           P +  +N L++ + R       +++L+   E+A           PNT T   +I+  C  
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAG--------LSPNTCTLNILINCFCLM 139

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD    +  K+    + P ++T+ +LI+G C A ++ +A  LF +M+ +G QP+V ++
Sbjct: 140 QHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTY 199

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             I+N LCK G+   A+ L++ M ++G +P+   Y+TL+D  C    VN A ++F  M++
Sbjct: 200 TTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKA 259

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    V SY+ LI G C     + A ++ +EM S  I PD+V ++ L     +   V  
Sbjct: 260 KGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLE 319

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M   GV  +   Y + + G      +VEA +LF  +     + D+ +Y+ LI+
Sbjct: 320 AQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILIN 379

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           G C   R+  A +LF  +    L  + V+Y  +IHA C  GK+ +AR+LF DM  
Sbjct: 380 GYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHT 434



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 141/269 (52%), Gaps = 6/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +   +   G EPNV TYN+L++G       + A  LF+ M          CKP+ 
Sbjct: 318 LEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRG------CKPDV 371

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y+ +I+G C    +D+AK+LF +M  + + PN V+Y +LIH FC      EA+ LF +
Sbjct: 372 FSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKD 431

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P++ +++V++   CK G + +A RL   M    ++PN  +Y  L+D  C +G 
Sbjct: 432 MHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGN 491

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A +LF  +   G + +V  Y+ +ING CK   ++ AL  + +M   G  P+   YN 
Sbjct: 492 LNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNV 551

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +  G  +     RA +L  EM+  G  AD
Sbjct: 552 IIRGFLQHKDESRAVQLIGEMRDKGFVAD 580



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 77/153 (50%)

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +  +SL  +M   G+ P+    N L      +  V+  F +  ++ + G+      + T 
Sbjct: 108 DAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTL 167

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I+GLCK G   +A+ELF  +     + D+  Y  +I+GLCK G    A  L + +     
Sbjct: 168 INGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGC 227

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             DVVTY+ +I +LC D  +++A D+F  M+AK
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAK 260


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  288 bits (737), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/368 (41%), Positives = 218/368 (59%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF K+   G +PNV TY TLINGLC+ G T  A+ L   M  GN      C+P+ V
Sbjct: 156 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVV 209

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+IID LCK+  V +A  LF +M  + I+P++ TYNSLIH  C   +W     L  EM
Sbjct: 210 VYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 269

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + PNVV F+ +++ LCK GK+ EA  ++++MI+ GV PN   YN LMDG CL   +
Sbjct: 270 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 329

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M   G   +V SYS LINGYCK + IE A+ L+ EM  K + P+ V Y+TL
Sbjct: 330 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 389

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D  +Y   +D LCKN  + EA+ L + +     
Sbjct: 390 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 449

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+ Y  +IDG+C++G L+ A +LF +L    L  +V TY IMI+ LC  G + +A  
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 509

Query: 362 LFLDMEAK 369
           LF +M+ K
Sbjct: 510 LFGEMKRK 517



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 184/353 (52%), Gaps = 6/353 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P++FTYN+LI+ LC          L  EM N          PN V
Sbjct: 226 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK------IMPNVV 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++T++D LCKEG V +A ++   M    + PNVVTYN+L+ G C  ++ +EA  +F  M
Sbjct: 280 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VVS++ ++N  CK  ++++A  L E M +  + PN   Y+TLM G C  GR+
Sbjct: 340 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M + G   +  SY IL++  CKN+ ++ A++L   +    + PD+ IY  +
Sbjct: 400 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    ++E A  LF  +   G+  + W Y   I+GLC+ G + EA +LF  ++   Y
Sbjct: 460 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 519

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             +   YN +  G  ++       +L + +      ADV T  +++  L  DG
Sbjct: 520 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 572



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++      P++  +  L+  + +  H    L+L  +M      FG+   PN  
Sbjct: 51  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM----DSFGI--PPNIY 104

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C    +  A  +  K+      PN+ T+N+LI G C      E   LF +M
Sbjct: 105 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVV++  ++N LCK G    A RLL  M Q   +P+  VY +++D  C   +V
Sbjct: 165 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 224

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  M   G   ++F+Y+ LI+  C   E +   +L +EM++  I P+VVI++T+
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A  + D M + GV  +   Y   +DG C    + EAV++F T+    +
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y+ LI+G CK  R++ A  LF  + R  LI + VTY+ ++H LC  G++  A  
Sbjct: 345 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 404

Query: 362 LFLDMEAK 369
           LF +M  +
Sbjct: 405 LFHEMVTR 412



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P++  F  ++  + K         L   M   G+ PN +  
Sbjct: 47  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 106

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC   R+  A  +   +  +G + N+ +++ LI G C   +I   L L+ +M+ 
Sbjct: 107 NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 166

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P+VV Y TL  GL ++     A +L   M++     D   Y + ID LCK+  + +
Sbjct: 167 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 226

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  LF  +        I  YN LI  LC     K    L   +    ++ +VV ++ ++ 
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 286

Query: 349 ALCADGKMDKARDLFLDMEAK 369
           ALC +GK+ +A D+ +DM  K
Sbjct: 287 ALCKEGKVMEAHDV-VDMMIK 306



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 6/211 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TY+TL++GLC  G    A+ LF EM    G+      P+ V+Y  ++D LCK   +
Sbjct: 381 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVT-RGQI-----PDFVSYCILLDYLCKNRRL 434

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L   ++  N++P++  Y  +I G C A +   A+ LF  +  +G+ PNV ++ ++
Sbjct: 435 DEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIM 494

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LC+ G + EAS+L   M + G  PN   YN +  GF       R  +L   M + G 
Sbjct: 495 INGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF 554

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEML 227
             +V + ++L+     +   +    + SE L
Sbjct: 555 SADVSTSTVLVEMLSDDGLDQSVKQILSEFL 585



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +     +P++  Y  +I+G+CR G    A +LF  +++          PN  
Sbjct: 436 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG------LHPNVW 489

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I+GLC++G + +A +LF +MK +  +PN  TYN +  GF   N+      L  EM
Sbjct: 490 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 549

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           + +G   +V +  V++  L  +G      ++L   +Q
Sbjct: 550 LARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  288 bits (737), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 153/368 (41%), Positives = 218/368 (59%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF K+   G +PNV TY TLINGLC+ G T  A+ L   M  GN      C+P+ V
Sbjct: 147 EVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGN------CQPDVV 200

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+IID LCK+  V +A  LF +M  + I+P++ TYNSLIH  C   +W     L  EM
Sbjct: 201 VYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEM 260

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + PNVV F+ +++ LCK GK+ EA  ++++MI+ GV PN   YN LMDG CL   +
Sbjct: 261 VNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEM 320

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M   G   +V SYS LINGYCK + IE A+ L+ EM  K + P+ V Y+TL
Sbjct: 321 DEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTL 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D  +Y   +D LCKN  + EA+ L + +     
Sbjct: 381 MHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNM 440

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+ Y  +IDG+C++G L+ A +LF +L    L  +V TY IMI+ LC  G + +A  
Sbjct: 441 DPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASK 500

Query: 362 LFLDMEAK 369
           LF +M+ K
Sbjct: 501 LFGEMKRK 508



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 184/353 (52%), Gaps = 6/353 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P++FTYN+LI+ LC          L  EM N          PN V
Sbjct: 217 QAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSK------IMPNVV 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++T++D LCKEG V +A ++   M    + PNVVTYN+L+ G C  ++ +EA  +F  M
Sbjct: 271 IFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VVS++ ++N  CK  ++++A  L E M +  + PN   Y+TLM G C  GR+
Sbjct: 331 VCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRL 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M + G   +  SY IL++  CKN+ ++ A++L   +    + PD+ IY  +
Sbjct: 391 QDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIV 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    ++E A  LF  +   G+  + W Y   I+GLC+ G + EA +LF  ++   Y
Sbjct: 451 IDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGY 510

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             +   YN +  G  ++       +L + +      ADV T  +++  L  DG
Sbjct: 511 SPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 188/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++      P++  +  L+  + +  H    L+L  +M      FG+   PN  
Sbjct: 42  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM----DSFGI--PPNIY 95

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C    +  A  +  K+      PN+ T+N+LI G C      E   LF +M
Sbjct: 96  TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVV++  ++N LCK G    A RLL  M Q   +P+  VY +++D  C   +V
Sbjct: 156 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 215

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  M   G   ++F+Y+ LI+  C   E +   +L +EM++  I P+VVI++T+
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A  + D M + GV  +   Y   +DG C    + EAV++F T+    +
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y+ LI+G CK  R++ A  LF  + R  LI + VTY+ ++H LC  G++  A  
Sbjct: 336 APDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIA 395

Query: 362 LFLDMEAK 369
           LF +M  +
Sbjct: 396 LFHEMVTR 403



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 122/261 (46%), Gaps = 1/261 (0%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P++  F  ++  + K         L   M   G+ PN +  
Sbjct: 38  NTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTL 97

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC   R+  A  +   +  +G + N+ +++ LI G C   +I   L L+ +M+ 
Sbjct: 98  NILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIG 157

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P+VV Y TL  GL ++     A +L   M++     D   Y + ID LCK+  + +
Sbjct: 158 EGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ 217

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  LF  +        I  YN LI  LC     K    L   +    ++ +VV ++ ++ 
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVD 277

Query: 349 ALCADGKMDKARDLFLDMEAK 369
           ALC +GK+ +A D+ +DM  K
Sbjct: 278 ALCKEGKVMEAHDV-VDMMIK 297



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/211 (30%), Positives = 108/211 (51%), Gaps = 6/211 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TY+TL++GLC  G    A+ LF EM    G+      P+ V+Y  ++D LCK   +
Sbjct: 372 PNTVTYSTLMHGLCHVGRLQDAIALFHEMVT-RGQI-----PDFVSYCILLDYLCKNRRL 425

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L   ++  N++P++  Y  +I G C A +   A+ LF  +  +G+ PNV ++ ++
Sbjct: 426 DEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIM 485

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LC+ G + EAS+L   M + G  PN   YN +  GF       R  +L   M + G 
Sbjct: 486 INGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGF 545

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEML 227
             +V + ++L+     +   +    + SE L
Sbjct: 546 SADVSTSTVLVEMLSDDGLDQSVKQILSEFL 576



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +     +P++  Y  +I+G+CR G    A +LF  +++          PN  
Sbjct: 427 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKG------LHPNVW 480

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I+GLC++G + +A +LF +MK +  +PN  TYN +  GF   N+      L  EM
Sbjct: 481 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 540

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           + +G   +V +  V++  L  +G      ++L   +Q
Sbjct: 541 LARGFSADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 148/366 (40%), Positives = 223/366 (60%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF ++   G  P++ TY T+I GLC+ GHT  AL L ++M          CKP+ 
Sbjct: 158 IDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG------CKPDV 211

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T+ID LCK+   ++A   F +M D+ I PNVVTY+S++HGFC     NEA  LF +
Sbjct: 212 VAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQ 271

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + V PN V+F ++++ LCK G + EA R+ E+M + GV P+A+ Y+ LMDG+CL  +
Sbjct: 272 MIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQ 331

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A++LF  M   G   +V  Y+ILING+CK++ +  A +L SEM  + + PD V Y+T
Sbjct: 332 MDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYST 391

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  + + A KLF EM  +G+  D+  Y   +DGLCK+G++ EA  L + ++  K
Sbjct: 392 LMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESK 451

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E  I  YN LI G+C  G+L+ A ELF +L    +   VVTY +MI  L  +G  ++A 
Sbjct: 452 IEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEAC 511

Query: 361 DLFLDM 366
           ++F  M
Sbjct: 512 EMFRKM 517



 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 128/361 (35%), Positives = 197/361 (54%), Gaps = 6/361 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G +P   T+ TL+NGLC     I A+ LF+E+    G+ G    P+ +TYTTII 
Sbjct: 131 KMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEI----GKMGFA--PSLITYTTIIK 184

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLCK G    A +L  KM+++   P+VV YN++I   C     NEA   F EM+DQG+ P
Sbjct: 185 GLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPP 244

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV+++ I++  C  G+++EA+ L + MI   V PN   +  L+DG C  G +  A  +F
Sbjct: 245 NVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVF 304

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G + + ++YS L++GYC   +++ A  L+  M+ KG  P V +YN L  G  + 
Sbjct: 305 EMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS 364

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A  L  EM    +  DT  Y T + G C+ G    A +LF+ +       D   Y
Sbjct: 365 RRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITY 424

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           + L+DGLCK G L  A+ L +++    +   +  YNI+I  +C  GK++ AR+LF ++  
Sbjct: 425 SILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFV 484

Query: 369 K 369
           K
Sbjct: 485 K 485



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  K+   GC+P+V  YNT+I+ LC+      A+  F EM +          PN VT
Sbjct: 195 ALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQG------IPPNVVT 248

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y++I+ G C  G +++A  LF +M   N+ PN VT+  L+ G C      EA+ +F  M 
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + GV+P+  +++ +M+  C   +MDEA +L ++M+  G  P+  VYN L++G C + R+N
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ L   M       +  +YS L+ G+C+    + A  L+ EM S G+ PD + Y+ L 
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   ++ AF+L   MQ   +      Y   I G+C  G +  A ELF  L +   +
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  Y  +I GL K G    A E+FR +     + +  TYN+ I     +G    A  L
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRL 548

Query: 363 FLDMEAK 369
             +M  +
Sbjct: 549 IEEMVGR 555



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 173/347 (49%), Gaps = 41/347 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F ++   G  PNV TY+++++G C  G    A +LF++M   N        PNTV
Sbjct: 229 EAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRN------VMPNTV 282

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T ++DGLCKEG + +A+ +F  M +  + P+  TY++L+ G+C  +  +EA+ LF  M
Sbjct: 283 TFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V  +N+++N  CK+ +++EA  LL  M    + P+   Y+TLM GFC  GR 
Sbjct: 343 VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRP 402

Query: 182 NRAEELFVSMESMG---------------CKH--------------------NVFSYSIL 206
             A++LF  M S G               CKH                    ++  Y+IL
Sbjct: 403 QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNIL 462

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G C   ++E A  L+S +  KGI+P VV Y  +  GL +      A ++F +M  +G 
Sbjct: 463 IQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGC 522

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             ++  Y   I G  +NG    AV L   +    +  D   +  L+D
Sbjct: 523 LPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 165/326 (50%), Gaps = 2/326 (0%)

Query: 43  EEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 102
           + +A+ N   G+   P  V +  ++  L K+        L  +M   NI PNV T   LI
Sbjct: 52  DAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILI 111

Query: 103 HGFCYAN--DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           +  C++N    + A     +M   G+QP  V+F  ++N LC   K+ +A +L + + ++G
Sbjct: 112 NCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMG 171

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             P+   Y T++ G C  G    A +L   ME  GCK +V +Y+ +I+  CK++    A+
Sbjct: 172 FAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAM 231

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             +SEM+ +GI P+VV Y+++  G   + Q+  A  LF +M    V  +T  +   +DGL
Sbjct: 232 YFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGL 291

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G I+EA  +F  +     E D   Y+ L+DG C   ++  A +LF  +        V
Sbjct: 292 CKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSV 351

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
             YNI+I+  C   ++++A+ L  +M
Sbjct: 352 RVYNILINGHCKSRRLNEAKTLLSEM 377


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 150/365 (41%), Positives = 216/365 (59%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G +PN  TY TLI+GLC+ G++  A+ L   M   N      C+PN +
Sbjct: 162 EALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKN------CEPNVI 215

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TIID L K+  V++A  +F +M  + I+PNV TYNS+IHG C  ++W     L  EM
Sbjct: 216 TYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM 275

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + PNVV F  +++ LCK G +  A  ++++MIQ GV P+   Y  LMDG CL   +
Sbjct: 276 VDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEM 335

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+++F +M   GC  NV SYS LINGYCK + I+ A+ L+ EM  + + P++V YNTL
Sbjct: 336 DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + ++  A  LF EM   G   D   YR  +D LCK  ++ +A+ + + +     
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI++YN +IDG+C+ G L+ A +LF SL    L  DV TY IMI+ LC  G + +A  
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATK 515

Query: 362 LFLDM 366
           LF +M
Sbjct: 516 LFREM 520



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 200/365 (54%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++  K+   G +P+  T+ TLI GLC  G    AL+LF++M  G G      +PN VTY 
Sbjct: 130 SVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV-GEG-----FQPNGVTYG 183

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLCK G    A  L   M  +N  PNV+TYN++I         NEA  +F EM+ +
Sbjct: 184 TLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAK 243

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PNV ++N I++ LCK  +    + L+  M+   + PN  ++ TL+D  C  G V  A
Sbjct: 244 GISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIA 303

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ++   M   G + +V +Y+ L++G+C   E++ A  ++  M+ KG  P+V+ Y+TL  G
Sbjct: 304 HDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLING 363

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +I ++++A  LF+EM +  +  +   Y T I GLC  G + +A+ LF  +       D
Sbjct: 364 YCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPD 423

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  L+D LCK+  L  A  + +++    L  D+ +YNI+I  +C  G+++ A DLF 
Sbjct: 424 LVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFS 483

Query: 365 DMEAK 369
            + +K
Sbjct: 484 SLSSK 488



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 182/353 (51%), Gaps = 6/353 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++   G  PNV TYN++I+GLC+         L  EM +          PN V
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSK------IMPNVV 285

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +TT++D LCKEG V  A ++   M    + P+VVTY +L+ G C  ++ +EA  +F  M
Sbjct: 286 IFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTM 345

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNV+S++ ++N  CK  ++D+A  L E M Q  + PN   YNTL+ G C  GR+
Sbjct: 346 VRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRL 405

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M + G   ++ +Y IL++  CK + ++ A+++   +    + PD+  YN +
Sbjct: 406 RDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIV 465

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+  + ++E A  LF  +   G+  D W Y   I+GLC  G + EA +LFR +     
Sbjct: 466 IDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGC 525

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             D   YN +  G  ++     A +L + +      AD  T  +++  L  DG
Sbjct: 526 SPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDG 578



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 182/369 (49%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F ++      P+V  +  ++  +    H    L+L ++M       G+   P+ V
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQM----DSLGI---PSDV 109

Query: 62  -TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T   +I+  C    VD    +  K+      P+  T+ +LI G C      EA  LF +
Sbjct: 110 YTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDK 169

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G QPN V++  +++ LCK G    A RLL  M+Q    PN   YNT++D      +
Sbjct: 170 MVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQ 229

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           VN A  +F  M + G   NV +Y+ +I+G CK  E +   +L +EM+   I P+VVI+ T
Sbjct: 230 VNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTT 289

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L +   V  A  + D M + GV  D   Y   +DG C    + EA ++F T+    
Sbjct: 290 LVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG 349

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++ +Y+ LI+G CK  R+  A  LF  + +  L+ ++VTYN +IH LC  G++  A 
Sbjct: 350 CAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAI 409

Query: 361 DLFLDMEAK 369
            LF +M A 
Sbjct: 410 ALFHEMVAS 418



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 140/294 (47%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A   F +M      P+VV +  ++        ++    L  +M   G+  +V +  +
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++D    +L  + ++G +P+   + TL+ G C+ G++  A  LF  M   G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  +Y  LI+G CK      A+ L   M+ K  +P+V+ YNT+   LF+  QV  A 
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +F EM   G++ +   Y + I GLCK         L   +   K   ++  +  L+D L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G + IA ++   + +  +  DVVTY  ++   C   +MD+A  +F  M  K
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRK 348



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 116/254 (45%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N  +EA   F  M+     P+VV F  I+  +           L + M  +G+  + +  
Sbjct: 53  NTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTL 112

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             +++ FC   RV+    +   +  +G + +  +++ LI G C   +I  AL L+ +M+ 
Sbjct: 113 AIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVG 172

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P+ V Y TL  GL ++     A +L   M +     +   Y T ID L K+  + E
Sbjct: 173 EGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE 232

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A+ +F  +       ++  YN +I GLCK    K    L   +    ++ +VV +  ++ 
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292

Query: 349 ALCADGKMDKARDL 362
           ALC +G +  A D+
Sbjct: 293 ALCKEGMVTIAHDV 306



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+   +      P++ +YN +I+G+CR G    A +LF  +++          P+  
Sbjct: 442 QAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG------LHPDVW 495

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I+GLC +G + +A +LF +M  +  +P+  TYN +  GF   N+   A  L  EM
Sbjct: 496 TYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEM 555

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           + +G   +  +  +I+  L  +G      ++L   +Q
Sbjct: 556 LGRGFSADASTITLIVEMLSDDGLDQSVKQILHEFVQ 592


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  286 bits (732), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 150/366 (40%), Positives = 221/366 (60%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   GC+P+ +TY T+INGLC+ G T +A  LF++M          C+ N V
Sbjct: 63  QAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG------CQLNVV 116

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+I  LCK   V++A ++F  MK ++I+P + TY SLI G C  + W EA  L  EM
Sbjct: 117 TYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEM 176

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PNVV+FNV+++  CK GK+  A  +L+ M ++GV P+   YN+LM G+ +   V
Sbjct: 177 TSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEV 236

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M + GCK +VFSYSILINGYCK K I+ A  L++EM+ +G  P+ V YNTL
Sbjct: 237 VEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ ++  A  LF  M  +G   + + Y   +DG CK GY+ +A  LFR ++    
Sbjct: 297 IHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL 356

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  YN L++ +CKSG LK A ELF  L    L  +V  Y  +I+ LC +G +D+A +
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416

Query: 362 LFLDME 367
            F +ME
Sbjct: 417 AFRNME 422



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 184/359 (51%), Gaps = 6/359 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           + + G  PN  T N LIN  C+     +    F  +A G     +  +P  VT+TT+I+G
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLG---FSVLAKG---IKLGLQPTIVTFTTLING 54

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           L K G   +A ELF  M      P+  TY ++I+G C   +   A  LF +M + G Q N
Sbjct: 55  LGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLN 114

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+++ +++ LCK  +++EA  +   M    + P  F Y +L+ G C   R   A  L  
Sbjct: 115 VVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLN 174

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M S+    NV ++++L++ +CK  ++  A  +   M   G++PDVV YN+L  G     
Sbjct: 175 EMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWT 234

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V  A KLFD M   G   D ++Y   I+G CK   I EA +LF  +       +  +YN
Sbjct: 235 EVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYN 294

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            LI GLC+ GRL+ A +LF+++     + ++ TY I++   C  G + KA  LF  M++
Sbjct: 295 TLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/296 (34%), Positives = 165/296 (55%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+AL  ++      PNV T+N L++  C+ G  + A  + + M     E GV  +P+ V
Sbjct: 168 EASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMT----EMGV--EPDVV 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++ G      V +A++LF  M  +   P+V +Y+ LI+G+C A   +EAK LF EM
Sbjct: 222 TYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEM 281

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  PN VS+N +++ LC+ G++ EA  L + M   G  PN + Y  L+DGFC  G +
Sbjct: 282 IHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYL 341

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF +M+S   K N+  Y+IL+N  CK+  ++ A  L+SE+   G++P+V IY T+
Sbjct: 342 GKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTI 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             GL +   ++ A + F  M+  G   D ++Y   I G  ++     AV L   +R
Sbjct: 402 INGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMR 457



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 137/269 (50%), Gaps = 6/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  +   +   G EP+V TYN+L+ G       + A  LF+ M          CKP+ 
Sbjct: 202 LAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKG------CKPDV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y+ +I+G CK   +D+AK+LF +M  +   PN V+YN+LIHG C      EA+ LF  
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PN+ ++ ++++  CK G + +A RL   M    ++PN  +YN L++  C +G 
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ELF  +  +G + NV  Y+ +ING CK   ++ AL  +  M   G  PD   YN 
Sbjct: 376 LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNV 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +  G  +     RA  L  EM+  G   D
Sbjct: 436 IIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 73/140 (52%)

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G+ P+    N L     ++ +V+  F +  +  + G+      + T I+GL K G   +A
Sbjct: 5   GLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQA 64

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           VELF  +     + D   Y  +I+GLCK G   +A  LF+ +       +VVTY+ +IH+
Sbjct: 65  VELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHS 124

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++++A D+F  M+AK
Sbjct: 125 LCKYRRVNEALDIFSYMKAK 144


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  286 bits (731), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 145/366 (39%), Positives = 222/366 (60%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++FTY T++NGLC+ G   +AL+L ++M  G  E       N V
Sbjct: 204 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE------ANVV 257

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIIDGLCK   +D A +LF KM+ + I P+V TYNSLI   C    W++A  L  +M
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDM 317

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+FN +++   K GK+ EA +L + MIQ  + PN   YN+L++GFC+  R+
Sbjct: 318 IERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 377

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+++F  M S  C  +V +Y+ LI G+CK K +E  + L+ EM  +G+  + V YNTL
Sbjct: 378 DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+    + A K+F +M   GV  D   Y   +DGLCK G + +A+ +F  L+  K 
Sbjct: 438 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E +I  YN +I+G+CK+G+++  W+LF SL    +  +V+ Y  MI   C  G  ++A  
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 557

Query: 362 LFLDME 367
           LF +M+
Sbjct: 558 LFREMK 563



 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 135/369 (36%), Positives = 209/369 (56%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA AL  ++   G +P+  T+NTLI+GL        A+ L + M A G       C+P+ 
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARG-------CQPDL 221

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T+++GLCK G +D A  L  KM+   I  NVV YN++I G C     ++A  LF +
Sbjct: 222 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNK 281

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++P+V ++N +++ LC  G+  +ASRLL  MI+  + PN   +N+L+D F   G+
Sbjct: 282 METKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGK 341

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  AE+LF  M       N+ +Y+ LING+C +  ++ A  +++ M+SK   PDVV YNT
Sbjct: 342 LIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNT 401

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +VE   +LF EM + G+  +T  Y T I GL + G    A ++F+ +    
Sbjct: 402 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 461

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              DI  Y+ L+DGLCK G+L+ A  +F  L +  +  ++ TYNIMI  +C  GK++   
Sbjct: 462 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGW 521

Query: 361 DLFLDMEAK 369
           DLF  +  K
Sbjct: 522 DLFCSLSLK 530



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 197/371 (53%), Gaps = 12/371 (3%)

Query: 2   EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A ALF   +K R F   P++  ++ L++ + +     V ++L E+M N     G+    
Sbjct: 64  DAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI--PH 114

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  TY+ +++  C+   +  A  +  KM      P++VT +SL++G+C+    +EA  L 
Sbjct: 115 NHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 174

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M++ G +P+ V+FN +++ L  + K  EA  L++ M+  G +P+ F Y T+++G C  
Sbjct: 175 DQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 234

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++ A  L   ME    + NV  Y+ +I+G CK K ++ A  L+++M +KGIKPDV  Y
Sbjct: 235 GDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 294

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L   L    +   A +L  +M    +  +   + + ID   K G ++EA +LF  +  
Sbjct: 295 NSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 354

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +I  YN LI+G C   RL  A ++F  +     + DVVTYN +I   C   ++++
Sbjct: 355 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEE 414

Query: 359 ARDLFLDMEAK 369
             +LF +M  +
Sbjct: 415 GMELFREMSQR 425



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 168/309 (54%), Gaps = 7/309 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N+LI+   + G  I A  LF+EM   +        PN VTY ++I+G C    +
Sbjct: 324 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS------IDPNIVTYNSLINGFCMHDRL 377

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A+++F  M  ++  P+VVTYN+LI GFC A    E   LF EM  +G+  N V++N +
Sbjct: 378 DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 437

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L + G  D A ++ + M+  GV P+   Y+ L+DG C  G++ +A  +F  ++    
Sbjct: 438 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + N+++Y+I+I G CK  ++E    L+  +  KG+KP+V+IY T+  G       E A  
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 557

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM+  G   D+  Y T I    ++G    + EL + +R   +  D    + +I+ L 
Sbjct: 558 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML- 616

Query: 317 KSGRLKIAW 325
             GRL+ ++
Sbjct: 617 HDGRLEKSY 625



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 95/290 (32%), Positives = 152/290 (52%), Gaps = 10/290 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++     +PN+ TYN+LING C       A  +F  M + +      C P+ 
Sbjct: 343 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDV 396

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V++  ELF +M    +  N VTYN+LI G   A D + A+ +F +
Sbjct: 397 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 456

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++++++++++ LCK GK+++A  + E + +  + PN + YN +++G C  G+
Sbjct: 457 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF S+   G K NV  Y+ +I+G+C+    E A +L+ EM   G  PD   YNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 576

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
           L            + +L  EM+  G   D       I    DG  +  Y+
Sbjct: 577 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 626



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 135/255 (52%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P+++ F+ +++ + K  K D    L E M  +G+  N + Y+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + ++ + S L+NGYC  K I  A++L  +M+  G 
Sbjct: 123 LNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGY 182

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KPD V +NTL  GLF  ++   A  L D M   G   D + Y T ++GLCK G I  A+ 
Sbjct: 183 KPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 242

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E ++  YN +IDGLCK   +  A++LF  +    +  DV TYN +I  LC
Sbjct: 243 LLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLC 302

Query: 352 ADGKMDKARDLFLDM 366
             G+   A  L  DM
Sbjct: 303 NYGRWSDASRLLSDM 317



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 153/291 (52%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF +M      P+++ ++ L+      N ++    L  +M + G+  N  ++++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  +L  M+++G  P+    ++L++G+C   R++ A  L   M  MG
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K +  +++ LI+G   + +   A++L   M+++G +PD+  Y T+  GL +   ++ A 
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  +M++  + A+   Y T IDGLCK  ++ +A +LF  +     + D+  YN LI  L
Sbjct: 242 SLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCL 301

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  +VVT+N +I A   +GK+ +A  LF +M
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  286 bits (731), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 149/367 (40%), Positives = 219/367 (59%), Gaps = 7/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G +PNV TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V
Sbjct: 157 DALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGN------CQPDVV 210

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+IID LCK+  V +A  LF KM  + I+P++ TY SLIH  C   +W     L  +M
Sbjct: 211 VYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQM 270

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV F+ +++ LCK GK+ EA  ++++MI  GV PN   YN LMDG CL   +
Sbjct: 271 INSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEM 330

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M   G   NV SY+ LINGYCK + ++ A  L+ EM  K + P+ V YNTL
Sbjct: 331 DEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTL 390

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            +    + +++ A  LF EM  HG   D   YR  +D LCK  ++ EA+ L +T+     
Sbjct: 391 -MHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNM 449

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+ Y  +IDG+C++G L+ A ++F +L    L  +V TY IMI+ LC  G +D+A  
Sbjct: 450 DPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANK 509

Query: 362 LFLDMEA 368
           LF++M+ 
Sbjct: 510 LFMEMDG 516



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 185/358 (51%), Gaps = 8/358 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G  P++FTY +LI+ LC          L  +M N          P+ V
Sbjct: 227 EAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK------IMPDVV 280

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++T++D LCKEG + +A ++   M    + PNVVTYN+L+ G C  ++ +EA  +F  M
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV+S+N ++N  CK  +MD+A+ L E M Q  + PN   YNTLM   C  GR+
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRL 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M + G   ++ +Y IL++  CK   ++ A++L   +    + PD+ IY  +
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    ++E A  +F  +   G+  +   Y   I+GLC+ G + EA +LF  +     
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D   YN +  GL ++     A +L + +      ADV T  +++  LC D K+D++
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLC-DDKLDQS 576



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 183/367 (49%), Gaps = 7/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++      P+   +N L+  + +T       +L  +M      FG+   P+  
Sbjct: 52  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQM----DSFGI--PPDVY 105

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C    +  A  +  K+      P+  T+ +LI G C      +A  LF +M
Sbjct: 106 TLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKM 165

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QPNVV++  ++N LCK G  + A RLL  M Q   +P+  VY +++D  C   +V
Sbjct: 166 IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 225

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   ++F+Y+ LI+  C   E +   +L ++M++  I PDVVI++T+
Sbjct: 226 TEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTV 285

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  ++  A  + D M   GV  +   Y   +DG C    + EAV++F T+    Y
Sbjct: 286 VDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGY 345

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ +YN LI+G CK  R+  A  LF  + +  LI + VTYN ++H  C  G++  A  
Sbjct: 346 APNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIA 404

Query: 362 LFLDMEA 368
           LF +M A
Sbjct: 405 LFHEMVA 411



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 161/313 (51%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            P+TV +  ++  + K         L  +M    I P+V T N LI+ FC+ N    A  
Sbjct: 66  PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFS 125

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +++  G QP+  +F  ++  LC  GK+ +A  L + MI  G +PN   Y TL++G C
Sbjct: 126 VLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLC 185

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G  N A  L  SME   C+ +V  Y+ +I+  CK++++  A +L+S+M+ +GI PD+ 
Sbjct: 186 KVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 245

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y +L   L  + + +    L ++M    +  D   + T +D LCK G I EA ++   +
Sbjct: 246 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            I   E ++  YN L+DG C    +  A ++F ++       +V++YN +I+  C   +M
Sbjct: 306 IIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRM 365

Query: 357 DKARDLFLDMEAK 369
           DKA  LF +M  K
Sbjct: 366 DKATYLFEEMCQK 378



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 120/254 (47%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P+ V FN ++  + K  +      L   M   G+ P+ +  
Sbjct: 48  NTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTL 107

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC   R+  A  +   +  +G + +  +++ LI G C   +I  AL L+ +M+ 
Sbjct: 108 NILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIG 167

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P+VV Y TL  GL ++     A +L   M++     D   Y + ID LCK+  + E
Sbjct: 168 EGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE 227

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  LF  +       DI  Y  LI  LC     K    L   +    ++ DVV ++ ++ 
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVD 287

Query: 349 ALCADGKMDKARDL 362
           ALC +GK+ +A D+
Sbjct: 288 ALCKEGKITEAHDV 301



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 40/258 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G  PNV +YNTLING C+      A  LFEEM            PNTV
Sbjct: 332 EAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE------LIPNTV 385

Query: 62  TYTTI----------------------------------IDGLCKEGFVDKAKELFLKMK 87
           TY T+                                  +D LCK+  +D+A  L   ++
Sbjct: 386 TYNTLMHXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIE 445

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
             N++P++  Y  +I G C A +   A+ +F  +  +G++PNV ++ +++N LC+ G +D
Sbjct: 446 GSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLD 505

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA++L   M   G  P+   YNT+  G        RA +L   M + G   +V + ++L+
Sbjct: 506 EANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLV 565

Query: 208 NGYCKNKEIEGALSLYSE 225
              C +K  +    + SE
Sbjct: 566 EMLCDDKLDQSVKQILSE 583



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 66/152 (43%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ALS ++ ML     P  V +N L   + +  Q    F L ++M   G+  D +    
Sbjct: 50  LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+  C    +  A  +   +  L ++ D   +  LI GLC  G++  A  LF  +    
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +VVTY  +I+ LC  G  + A  L   ME
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSME 201


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  285 bits (729), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 148/366 (40%), Positives = 225/366 (61%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  LF ++   G EP+V TY+T+INGLC+ G+T +AL L ++M          CKPN 
Sbjct: 27  MDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG------CKPNV 80

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y TIID LCK+  V +A + F +M  E I P+V TY+S++HGFC     NEA  LF +
Sbjct: 81  VAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQ 140

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ V PN V+F ++++ LCK   + EA  + E M + G+ P+ + YN L+DG+C   +
Sbjct: 141 MVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQ 200

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A++LF  M+  GC  NV SY+ILING+CK+  I+ A  L +EM  K + PD+  Y+T
Sbjct: 201 MDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYST 260

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++ + + A +L  EM  +G+  +   Y   +DGLCK+G++ EA EL + ++  K
Sbjct: 261 LMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESK 320

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E +I  Y  LI+G+C  G+L+ A ELF +L    +   VVTY +MI  L   G  ++A 
Sbjct: 321 IEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEAC 380

Query: 361 DLFLDM 366
           +LF +M
Sbjct: 381 ELFREM 386



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 178/316 (56%)

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
           F +  +P  VT+ T++ GLC +  +  A +LF +M      P+V+TY+++I+G C   + 
Sbjct: 2   FKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNT 61

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
             A  L  +M ++G +PNVV++N I++ LCK+  + EA      M++ G+ P+ F Y+++
Sbjct: 62  TMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSI 121

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + GFC  GRVN A  LF  M       N  +++ILI+G CK + I  A  ++  M  KG+
Sbjct: 122 LHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGL 181

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +PDV  YN L  G     Q++ A KLF+ M R G A +  +Y   I+G CK+G I EA  
Sbjct: 182 EPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKG 241

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +       DI  Y+ L+ G C+ GR + A EL + +    L+ +++TY+I++  LC
Sbjct: 242 LLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLC 301

Query: 352 ADGKMDKARDLFLDME 367
             G +D+A +L   M+
Sbjct: 302 KHGHLDEAFELLKAMQ 317



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/347 (34%), Positives = 176/347 (50%), Gaps = 41/347 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F ++   G  P+VFTY+++++G C  G    A +LF++M   N    V+  PN V
Sbjct: 98  EAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERN----VI--PNKV 151

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDGLCK+  + +A  +F  M ++ + P+V TYN+L+ G+C  +  +EA+ LF  M
Sbjct: 152 TFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIM 211

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNV S+N+++N  CK+G++DEA  LL  M    + P+ F Y+TLM GFC  GR 
Sbjct: 212 DRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRP 271

Query: 182 NRAEELFVSMESMG---------------CKH--------------------NVFSYSIL 206
             A+EL   M S G               CKH                    N+F Y+IL
Sbjct: 272 QEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTIL 331

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G C   ++E A  L+S +  KGI+P VV Y  +  GL +      A +LF EM  +G 
Sbjct: 332 IEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGC 391

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             ++  Y   I G  +NG    AV L   +    +  D   +  L D
Sbjct: 392 LPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 140/249 (56%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+QP +V+FN +++ LC   K+ +A +L + M+++G  P+   Y+T+++G C  G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +L   ME  GCK NV +Y+ +I+  CK++ +  A+  +SEM+ +GI PDV  Y++
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G   + +V  A  LF +M    V  +   +   IDGLCK   I EA  +F T+    
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E D+  YN L+DG C   ++  A +LF  + R     +V +YNI+I+  C  G++D+A+
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 361 DLFLDMEAK 369
            L  +M  K
Sbjct: 241 GLLAEMSHK 249


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+P+V TYN+++NG+CR+G T +AL+L  +M   N       K +  
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVF 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+TIID LC++G +D A  LF +M+ + I  +VVTYNSL+ G C A  WN+   L  +M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV++FNV+++   K GK+ EA+ L + MI  G+ PN   YNTLMDG+C+  R+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M    C  ++ +++ LI GYC  K ++  + ++  +  +G+  + V Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++ A +LF EM  HGV  D   Y   +DGLC NG + +A+E+F  L+  K 
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L I  Y  +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 362 LFLDME 367
           L   ME
Sbjct: 530 LLRKME 535



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 199/367 (54%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T+NTLI GL   G    A+ L + M   NG     C+P+ VT
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG-----CQPDVVT 195

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y +I++G+C+ G    A +L  KM++ N+  +V TY+++I   C     + A  LF EM 
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +VV++N ++  LCK GK ++ + LL+ M+   + PN   +N L+D F   G++ 
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL+  M + G   N+ +Y+ L++GYC    +  A ++   M+     PD+V + +L 
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + +V+   K+F  + + G+ A+   Y   + G C++G I  A ELF+ +      
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y  L+DGLC +G+L+ A E+F  L +  +   +V Y  +I  +C  GK++ A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 363 FLDMEAK 369
           F  +  K
Sbjct: 496 FCSLPCK 502



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 199/402 (49%), Gaps = 43/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           +A ALF ++      P++  ++   + + RT    + L+  +++  NG          N 
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-------NI 123

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T   +I+  C+      A  +  K+      P+  T+N+LI G       +EA  L   
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G QP+VV++N I+N +C++G    A  LL  M +  V+ + F Y+T++D  C  G 
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCK---------------NKEI--------- 216
           ++ A  LF  ME+ G K +V +Y+ L+ G CK               ++EI         
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 217 -------EGALS----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                  EG L     LY EM+++GI P+++ YNTL  G    +++  A  + D M R+ 
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
            + D   + + I G C    + + +++FR +       +   Y+ L+ G C+SG++K+A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ELF+ +    ++ DV+TY I++  LC +GK++KA ++F D++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 153/299 (51%), Gaps = 6/299 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N L++   + G    A  L++EM       G+   PN +TY T++DG C +  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR----GI--SPNIITYNTLMDGYCMQNRL 349

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  +   M     +P++VT+ SLI G+C     ++   +F  +  +G+  N V+++++
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C++GK+  A  L + M+  GV P+   Y  L+DG C  G++ +A E+F  ++    
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              +  Y+ +I G CK  ++E A +L+  +  KG+KP+V+ Y  +  GL +   +  A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           L  +M+  G A +   Y T I    ++G +  + +L   ++   +  D  +   +ID L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 4/240 (1%)

Query: 134 NVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           NV   E  ++G    K D+A  L + MI+    P+   ++        T + N   +   
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +E  G  HN+++ +I+IN +C+  +   A S+  +++  G +PD   +NTL  GLF   
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V  A  L D M  +G   D   Y + ++G+C++G    A++L R +     + D+  Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +ID LC+ G +  A  LF+ +    + + VVTYN ++  LC  GK +    L  DM ++
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  284 bits (726), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 143/367 (38%), Positives = 218/367 (59%), Gaps = 7/367 (1%)

Query: 2   EAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A  LF KL R   CEP+   Y T+++GLC+ GHT  A +L   M  G      + KP+T
Sbjct: 160 DAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQG------ITKPDT 213

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  +ID  CK+G +D A  L  +MK +NI P+++TY SLI G    + W + + LF+E
Sbjct: 214 CIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLE 273

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   + P+V +FN +++ LCK GK+++A  ++  MI+ GV PN   YN +MDG+CL G+
Sbjct: 274 MIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQ 333

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + RA  +F SM   G + ++ SY+ LINGY + K+++ A+ L+ E+   G+KP +V  + 
Sbjct: 334 MGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSV 393

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GLFE+ + E A   FDEMQ  G   + + + T + G  KNG + EA+  F  L   +
Sbjct: 394 LLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRR 453

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +I+ Y  +I+GLCK+G+L  A   F  LP   L  DV+TY  MI   C +G +D+A+
Sbjct: 454 EDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAK 513

Query: 361 DLFLDME 367
           D+   ME
Sbjct: 514 DMLRKME 520



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 182/367 (49%), Gaps = 9/367 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++F ++       + F  +T++N  C    T +  ++          F      N VT+T
Sbjct: 93  SIFREIHKLRIPVDAFALSTVVNSCCLMHRTDLGFSVLAI------HFKKGIPYNEVTFT 146

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           T+I GL  E  V  A  LF K+  ENI  P+ V Y +++ G C      +A  L + +M+
Sbjct: 147 TLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDL-LRLME 205

Query: 124 QGV-QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           QG+ +P+   +N++++  CK+G +D A+ LL  M Q  + P+   Y +L+DG     +  
Sbjct: 206 QGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWE 265

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +   LF+ M  +    +V +++ +I+G CK  ++E A  + + M+ KG++P+ + YN + 
Sbjct: 266 KVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVM 325

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     Q+ RA ++FD M   G+  D  +Y   I+G  +   + +A++LFR +     +
Sbjct: 326 DGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLK 385

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             I   + L+ GL + GR + A   F  +     I ++ T+  ++     +G +++A   
Sbjct: 386 PSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSH 445

Query: 363 FLDMEAK 369
           F  +E +
Sbjct: 446 FHKLERR 452



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF ++      P+  +++ L+  L    H    +++F E+        +    +  
Sbjct: 55  DAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHK------LRIPVDAF 108

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             +T+++  C     D    +      + I  N VT+ +LI G    N   +A  LF ++
Sbjct: 109 ALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKL 168

Query: 122 MDQGV-QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + + +P+ V +  +M+ LCK G   +A  LL LM Q   +P+  +YN ++D FC  G 
Sbjct: 169 VRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVIDAFCKDGM 228

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  L   M+      ++ +Y+ LI+G  K  + E   +L+ EM+   I PDV  +N+
Sbjct: 229 LDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNS 288

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +VE A ++   M   GV  +   Y   +DG C  G +  A  +F ++    
Sbjct: 289 VIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKG 348

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E DI +Y  LI+G  +  ++  A +LFR + +  L   +VT ++++  L   G+ + A+
Sbjct: 349 IEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAK 408

Query: 361 DLFLDMEA 368
             F +M+A
Sbjct: 409 IFFDEMQA 416



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 165/354 (46%), Gaps = 41/354 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +++     P++ TY +LI+GL +         LF EM + N        P+  T
Sbjct: 232 ATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLN------IYPDVCT 285

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + ++IDGLCKEG V+ A+E+   M ++ + PN +TYN ++ G+C       A+ +F  M+
Sbjct: 286 FNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMI 345

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G++P+++S+  ++N   +  KMD+A +L   + Q G++P+    + L+ G    GR  
Sbjct: 346 DKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTE 405

Query: 183 RAEELFVSMESMGCKHNVFS-----------------------------------YSILI 207
            A+  F  M++ G   N+++                                   Y+ +I
Sbjct: 406 CAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVI 465

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           NG CKN +++ A + + ++   G+ PDV+ Y  +  G  +   ++ A  +  +M+ +G  
Sbjct: 466 NGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCL 525

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            D   Y   + G  ++  + E     + +    +  +      L+D + +   L
Sbjct: 526 PDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAATVELLMDIIAEDPSL 579



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 150/325 (46%), Gaps = 41/325 (12%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            LF+++      P+V T+N++I+GLC+ G    A    EE+     E GV  +PN +TY 
Sbjct: 269 TLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDA----EEIMTYMIEKGV--EPNEITYN 322

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            ++DG C  G + +A+ +F  M D+ I P++++Y +LI+G+      ++A  LF E+   
Sbjct: 323 VVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN 382

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF------------------ 166
           G++P++V+ +V++  L + G+ + A    + M   G  PN +                  
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442

Query: 167 -----------------VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
                            +Y  +++G C  G++++A   F  +  +G   +V +Y+ +I+G
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YC+   ++ A  +  +M   G  PD   YN +  G F   +V        E+     + +
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFE 562

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFR 294
                  +D + ++  ++  +  F 
Sbjct: 563 AATVELLMDIIAEDPSLLNMIPEFH 587



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 7/272 (2%)

Query: 105 FCYANDWNEAKCL------FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           F  +N++   KCL      F +M+     P+ VSF+ ++  L           +   + +
Sbjct: 41  FGVSNEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHK 100

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
           + +  +AF  +T+++  CL  R +    +       G  +N  +++ LI G     +++ 
Sbjct: 101 LRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKD 160

Query: 219 ALSLYSEMLSKGI-KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           A+ L+ +++ + I +PD V+Y T+  GL +    ++AF L   M++     DT  Y   I
Sbjct: 161 AVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVI 220

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           D  CK+G +  A  L   ++      DI  Y  LIDGL K  + +    LF  +    + 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY 280

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            DV T+N +I  LC +GK++ A ++   M  K
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEK 312



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 6/145 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F KL     + N+  Y  +INGLC+ G    A   FE++        +   P+ +
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLP------LIGLHPDVI 494

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G C+EG +D+AK++  KM+D    P+  TYN ++ GF  ++  +E K    E+
Sbjct: 495 TYTAMISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEI 554

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKM 146
             +       +  ++M+ + ++  +
Sbjct: 555 AGKSFSFEAATVELLMDIIAEDPSL 579


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  283 bits (725), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+P+V TYN+++NG+CR+G T +AL+L  +M   N       K +  
Sbjct: 166 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVF 219

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+TIID LC++G +D A  LF +M+ + I  +VVTYNSL+ G C A  WN+   L  +M
Sbjct: 220 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 279

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV++FNV+++   K GK+ EA+ L + MI  G+ PN   YNTLMDG+C+  R+
Sbjct: 280 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 339

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M    C  ++ +++ LI GYC  K ++  + ++  +  +G+  + V Y+ L
Sbjct: 340 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 399

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++ A +LF EM  HGV  D   Y   +DGLC NG + +A+E+F  L+  K 
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L I  Y  +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A  
Sbjct: 460 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 519

Query: 362 LFLDME 367
           L   ME
Sbjct: 520 LLRKME 525



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 199/367 (54%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T+NTLI GL   G    A+ L + M   NG     C+P+ VT
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG-----CQPDVVT 185

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y +I++G+C+ G    A +L  KM++ N+  +V TY+++I   C     + A  LF EM 
Sbjct: 186 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 245

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +VV++N ++  LCK GK ++ + LL+ M+   + PN   +N L+D F   G++ 
Sbjct: 246 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 305

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL+  M + G   N+ +Y+ L++GYC    +  A ++   M+     PD+V + +L 
Sbjct: 306 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 365

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + +V+   K+F  + + G+ A+   Y   + G C++G I  A ELF+ +      
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y  L+DGLC +G+L+ A E+F  L +  +   +V Y  +I  +C  GK++ A +L
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485

Query: 363 FLDMEAK 369
           F  +  K
Sbjct: 486 FCSLPCK 492



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 199/402 (49%), Gaps = 43/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           +A ALF ++      P++  ++   + + RT    + L+  +++  NG          N 
Sbjct: 61  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-------NI 113

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T   +I+  C+      A  +  K+      P+  T+N+LI G       +EA  L   
Sbjct: 114 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 173

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G QP+VV++N I+N +C++G    A  LL  M +  V+ + F Y+T++D  C  G 
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 233

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCK---------------NKEI--------- 216
           ++ A  LF  ME+ G K +V +Y+ L+ G CK               ++EI         
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293

Query: 217 -------EGALS----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                  EG L     LY EM+++GI P+++ YNTL  G    +++  A  + D M R+ 
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
            + D   + + I G C    + + +++FR +       +   Y+ L+ G C+SG++K+A 
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ELF+ +    ++ DV+TY I++  LC +GK++KA ++F D++
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 455



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 153/299 (51%), Gaps = 6/299 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N L++   + G    A  L++EM       G+   PN +TY T++DG C +  +
Sbjct: 286 PNVITFNVLLDVFVKEGKLQEANELYKEMIT----RGI--SPNIITYNTLMDGYCMQNRL 339

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  +   M     +P++VT+ SLI G+C     ++   +F  +  +G+  N V+++++
Sbjct: 340 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 399

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C++GK+  A  L + M+  GV P+   Y  L+DG C  G++ +A E+F  ++    
Sbjct: 400 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 459

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              +  Y+ +I G CK  ++E A +L+  +  KG+KP+V+ Y  +  GL +   +  A  
Sbjct: 460 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 519

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           L  +M+  G A +   Y T I    ++G +  + +L   ++   +  D  +   +ID L
Sbjct: 520 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 4/240 (1%)

Query: 134 NVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           NV   E  ++G    K D+A  L + MI+    P+   ++        T + N   +   
Sbjct: 43  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 102

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +E  G  HN+++ +I+IN +C+  +   A S+  +++  G +PD   +NTL  GLF   
Sbjct: 103 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 162

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V  A  L D M  +G   D   Y + ++G+C++G    A++L R +     + D+  Y+
Sbjct: 163 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 222

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +ID LC+ G +  A  LF+ +    + + VVTYN ++  LC  GK +    L  DM ++
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 95/388 (24%), Positives = 161/388 (41%), Gaps = 65/388 (16%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A  LF ++   G  P+V TY  L++GLC  G    AL +FE++     + G+V       
Sbjct: 412 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 471

Query: 56  ----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                  KPN +TYT +I GLCK+G + +A  L  KM+++   P
Sbjct: 472 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 531

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL-----------CK 142
           N  TYN+LI       D   +  L  EM   G   +  S  ++++ L           C 
Sbjct: 532 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 591

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR--VNRAEELFVSMESMGCKHNV 200
           +        LLEL     +R ++  +  +     +T    VN  E   ++   +      
Sbjct: 592 SKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRK 651

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIK-PDVVIYNTLFIGLFEIHQVERAFK--- 256
              S ++  + KN+++   + + +E+L+ G++  +  +   L +    +H   RA +   
Sbjct: 652 LRRSSVLKKF-KNRDVR--VLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRR 708

Query: 257 ------------LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
                       L  EM + G+A +T  Y + IDG CK   + EA ++   L + K + D
Sbjct: 709 PGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQML-DLMVTKGDSD 767

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           IR    L+ GL +  R     E + +LP
Sbjct: 768 IRY---LLAGLMRKKRKGSETEGWENLP 792



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 7/106 (6%)

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM- 172
           A+ L  EM+ +G+ PN ++++ +++  CK  ++DEA+++L+LM+  G     ++   LM 
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDSDIRYLLAGLMR 777

Query: 173 ---DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
               G    G  N  ++L  S  S   + + F     + GY + K+
Sbjct: 778 KKRKGSETEGWENLPDDLSCSTAS---RSSNFRSHFSLEGYARLKK 820


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  283 bits (725), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+P+V TYN+++NG+CR+G T +AL+L  +M   N       K +  
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVF 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+TIID LC++G +D A  LF +M+ + I  +VVTYNSL+ G C A  WN+   L  +M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV++FNV+++   K GK+ EA+ L + MI  G+ PN   YNTLMDG+C+  R+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M    C  ++ +++ LI GYC  K ++  + ++  +  +G+  + V Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++ A +LF EM  HGV  D   Y   +DGLC NG + +A+E+F  L+  K 
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L I  Y  +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 362 LFLDME 367
           L   ME
Sbjct: 530 LLRKME 535



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 199/367 (54%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T+NTLI GL   G    A+ L + M   NG     C+P+ VT
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG-----CQPDVVT 195

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y +I++G+C+ G    A +L  KM++ N+  +V TY+++I   C     + A  LF EM 
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +VV++N ++  LCK GK ++ + LL+ M+   + PN   +N L+D F   G++ 
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL+  M + G   N+ +Y+ L++GYC    +  A ++   M+     PD+V + +L 
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + +V+   K+F  + + G+ A+   Y   + G C++G I  A ELF+ +      
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y  L+DGLC +G+L+ A E+F  L +  +   +V Y  +I  +C  GK++ A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 363 FLDMEAK 369
           F  +  K
Sbjct: 496 FCSLPCK 502



 Score =  170 bits (431), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 199/402 (49%), Gaps = 43/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           +A ALF ++      P++  ++   + + RT    + L+  +++  NG          N 
Sbjct: 71  DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-------NI 123

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T   +I+  C+      A  +  K+      P+  T+N+LI G       +EA  L   
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G QP+VV++N I+N +C++G    A  LL  M +  V+ + F Y+T++D  C  G 
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCK---------------NKEI--------- 216
           ++ A  LF  ME+ G K +V +Y+ L+ G CK               ++EI         
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 217 -------EGALS----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                  EG L     LY EM+++GI P+++ YNTL  G    +++  A  + D M R+ 
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
            + D   + + I G C    + + +++FR +       +   Y+ L+ G C+SG++K+A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ELF+ +    ++ DV+TY I++  LC +GK++KA ++F D++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 158/309 (51%), Gaps = 7/309 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N L++   + G    A  L++EM       G+   PN +TY T++DG C +  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR----GI--SPNIITYNTLMDGYCMQNRL 349

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  +   M     +P++VT+ SLI G+C     ++   +F  +  +G+  N V+++++
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C++GK+  A  L + M+  GV P+   Y  L+DG C  G++ +A E+F  ++    
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              +  Y+ +I G CK  ++E A +L+  +  KG+KP+V+ Y  +  GL +   +  A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M+  G A +   Y T I    ++G +  + +L   ++   +  D  +   +ID L 
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589

Query: 317 KSGRLKIAW 325
            SG L  ++
Sbjct: 590 -SGELDKSF 597



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 4/240 (1%)

Query: 134 NVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           NV   E  ++G    K D+A  L + MI+    P+   ++        T + N   +   
Sbjct: 53  NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +E  G  HN+++ +I+IN +C+  +   A S+  +++  G +PD   +NTL  GLF   
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V  A  L D M  +G   D   Y + ++G+C++G    A++L R +     + D+  Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +ID LC+ G +  A  LF+ +    + + VVTYN ++  LC  GK +    L  DM ++
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  283 bits (724), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 145/366 (39%), Positives = 215/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G +P+V  Y TLINGLC+TGHT  A+ L   M  GN      C+P+ V
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGN------CQPDVV 215

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I  LCK+    +A  LF +M  + I+PN+VT NSL++  C   +W     L  EM
Sbjct: 216 VYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM 275

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + PN +S   +++ LCK G + +A  ++++M Q GV P+   Y  L+DG CL   +
Sbjct: 276 VDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEM 335

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  M   GC  NVFSY+ LINGYCK + ++ A+ L+ EM  + + P+ V YNTL
Sbjct: 336 DEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTL 395

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D   YR  +D LCKN ++ +A+ L + +     
Sbjct: 396 IHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNL 455

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+ Y  +IDG+C++G L+ A +LF +L    L  +V TYNIM H LC  G +D+A  
Sbjct: 456 DPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATK 515

Query: 362 LFLDME 367
           LF++M+
Sbjct: 516 LFMEMD 521



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 183/394 (46%), Gaps = 33/394 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCK---- 57
           A  L   +    C+P+V  Y TLI+ LC+      A NLF EM   G     V C     
Sbjct: 198 AIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVY 257

Query: 58  ------------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                   PN ++ TT++D LCKEG V +A ++   M    + P
Sbjct: 258 ALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEP 317

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           +VVTY +LI G C  ++ +EA  +F  M+ +G  PNV S+N ++N  CK  +MD+A  L 
Sbjct: 318 DVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLF 377

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           E M +  + PN   YNTL+ G C  GR+  A  LF  M + G   ++ +Y IL++  CKN
Sbjct: 378 EEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKN 437

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             ++ A++L   +    + PD+ IY  +  G+    ++E A  LF  +   G+  + W Y
Sbjct: 438 CHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTY 497

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
                GLCK G + EA +LF  +       D   YN +  G  ++     A +L   +  
Sbjct: 498 NIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLA 557

Query: 334 GVLIADVVTYNIMIHALCADG----KMDKARDLF 363
                DV T  +++  L  DG    +  K  D+F
Sbjct: 558 RGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDMF 591



 Score =  174 bits (441), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 165/346 (47%), Gaps = 35/346 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V +  I+  + K         L  KM    I  NV T N LI+ FC+ N  N A  +
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+  SF  ++  LC  G++ EA  L + MI  G +P+  +Y TL++G C 
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           TG  + A  L  SME   C+ +V  Y  LI+  CK+++   A +L+SEM++KGI P++V 
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 238 YNTLFIGLFEIHQ-----------------------------------VERAFKLFDEMQ 262
            N+L   L  + +                                   V +A  + D M 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           + GV  D   Y   IDG C    + EAV++F  +       ++ +YN LI+G CK  R+ 
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            A  LF  + R  LI + VTYN +IH LC  G++  A  LF +M A
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVA 417



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 121/265 (45%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N     + + N  ++A   F  M+     P++V F  I+  + K  +      L   M 
Sbjct: 42  HNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMD 101

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G+  N +  N L++ FC   RVN A  +   +  +GC+ +  S++ LI G C   +I 
Sbjct: 102 SFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL L+ +M+ +G +PDVVIY TL  GL +      A +L   M++     D   Y T I
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             LCK+    +A  LF  +       +I   N L+  LC  G  K    L   +    ++
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIM 281

Query: 338 ADVVTYNIMIHALCADGKMDKARDL 362
            + ++   ++ ALC +G + +A D+
Sbjct: 282 PNAISLTTVVDALCKEGMVAQAHDV 306



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 106/221 (47%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A      M+ +   P+   +  ++       R +    L   M+S G  HNV++ ++
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN +C    +  A S+ +++L  G +PD   + TL  GL    Q+  A  LFD+M   G
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   Y T I+GLCK G+   A+ L R++     + D+  Y  LI  LCK  +   A+
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LF  +    +  ++VT N +++ALC  G+      L  +M
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM 275



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 100/205 (48%)

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           + ++N     +     ++ A   F  M  M    ++  ++ ++    K K     LSL  
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M S GI  +V   N L      +++V  AF +  ++ + G   DT ++ T I GLC  G
Sbjct: 99  KMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEG 158

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            I EA+ LF  +    ++ D+  Y  LI+GLCK+G    A  L RS+ +G    DVV Y 
Sbjct: 159 QIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYG 218

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +IH+LC D +  +A +LF +M  K
Sbjct: 219 TLIHSLCKDRQQTQAFNLFSEMITK 243


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  283 bits (724), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 146/366 (39%), Positives = 214/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G +P+V TY TLINGLC+ G+T  A+     M   N      C+P  V
Sbjct: 142 EALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRN------CRPTVV 195

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+TIID LCK+  + +A  LF  M  + I+PN  TY+SLIHG C    W EA  LF  M
Sbjct: 196 VYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAM 255

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+ ++FN +++ LCK G + +A  ++++MIQ  ++P+   YN+LMDG CL   +
Sbjct: 256 IHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEM 315

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +   +F +M   GC  +V SY+ LINGYCK + ++ A+ L+ EM  +G+ PD V YNTL
Sbjct: 316 GKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTL 375

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + ++  A  LF EM  +G   D   YR   D LCKN  + EA+ L + +     
Sbjct: 376 IHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNL 435

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  Y+ ++DG+C++G L+ A +LF  L    L  DV TY IMI+ LC  G + +A  
Sbjct: 436 DPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASK 495

Query: 362 LFLDME 367
           LF +M+
Sbjct: 496 LFGEMD 501



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 148/269 (55%), Gaps = 6/269 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V TYN+L++G C        +N+F+ M          C P+ ++YTT+I+G CK   
Sbjct: 296 KPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG------CVPSVISYTTLINGYCKIQI 349

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +DKA  LF +M  + + P+ VTYN+LIHG C+     +A  LF EM+  G  P++V++ +
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           + + LCKN ++ EA  LL+++    + P+  +Y+ +MDG C  G +  A +LF  + S G
Sbjct: 410 LFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG 469

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +V +Y+I+ING C+   +  A  L+ EM   G  P+   YN +  G    ++  RA 
Sbjct: 470 LHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAI 529

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +LF EM   G + D       ++ L  +G
Sbjct: 530 QLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 169/353 (47%), Gaps = 41/353 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF  +   G  PN FTY++LI+GLC  GH   A+ LF  M +          P+ +
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK------IMPDQL 265

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL-------------------- 101
           T+ T++D LCKEG V KA  +   M   ++ P+VVTYNSL                    
Sbjct: 266 TFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTM 325

Query: 102 ---------------IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                          I+G+C     ++A  LF EM  QG+ P+ V++N +++ LC  G++
Sbjct: 326 VRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRL 385

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +A  L   M+  G  P+   Y  L D  C   R+  A  L   +E      ++  YSI+
Sbjct: 386 RDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIV 445

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G C+  E+E A  L+S++ SKG+ PDV  Y  +  GL +   +  A KLF EM  +G 
Sbjct: 446 MDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGC 505

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           + +   Y     G  +N   + A++LF+ +    + +D+     L++ L   G
Sbjct: 506 SPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDG 558



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 164/332 (49%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL+LF  M        +   P+ V ++ ++  + +         L+ +M    I  N  T
Sbjct: 38  ALSLFNRM------LRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            N LI+ FC+ N    A  +  +++  G QP+  +F  ++  LC  GK+ EA +L + M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +P+   Y TL++G C  G  + A     SME   C+  V  YS +I+  CK++++ 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            ALSL+S+ML+KGI P+   Y++L  GL  +   + A +LF  M    +  D   + T +
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           D LCK G +V+A  +   +     + D+  YN L+DG C    +     +F ++ R   +
Sbjct: 272 DALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCV 331

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             V++Y  +I+  C    MDKA  LF +M  +
Sbjct: 332 PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ 363



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 146/294 (49%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF +M      P++V ++ L+        ++    L+ +M   G+  N  + N+
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  ++++G +P+   + TL+ G C+ G++  A +LF  M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +V +Y  LING CK      A+     M  +  +P VV+Y+T+   L +  Q+  A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF +M   G++ + + Y + I GLC  G+  EA+ LF  +   K   D   +N L+D L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G +  A  +   + +  L  DVVTYN ++   C   +M K  ++F  M  K
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRK 328



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 121/253 (47%)

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
            N  ++A  LF  M+     P++V F+ ++  + +         L + M   G+  N + 
Sbjct: 32  VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            N L++ FC   R+  A  +   +  +G + +  +++ LI G C   +I  AL L+ +M 
Sbjct: 92  LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +G +PDV+ Y TL  GL ++     A +    M++         Y T ID LCK+  + 
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLT 211

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           EA+ LF  +       +   Y+ LI GLC  G  K A  LF ++    ++ D +T+N ++
Sbjct: 212 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLV 271

Query: 348 HALCADGKMDKAR 360
            ALC +G + KA 
Sbjct: 272 DALCKEGMVVKAH 284



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/150 (28%), Positives = 82/150 (54%), Gaps = 7/150 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +     +P++  Y+ +++G+CR G    A +LF ++++          P+  
Sbjct: 422 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKG------LHPDVR 475

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I+GLC++G + +A +LF +M +   +PN  TYN +  GF   N+   A  LF EM
Sbjct: 476 TYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEM 535

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           + +G   +V +  +++  L  +G +D++ +
Sbjct: 536 LSRGFSIDVSTTTLLVEMLSDDG-LDQSVK 564


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 140/366 (38%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+PNV TYN+++NG+C++G T +AL+L  +M   N       K +  
Sbjct: 153 EAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN------VKADVF 206

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+TIID LC++G +D A  LF +M+ + I  ++VTYNSL+ G C A  WN+   L  +M
Sbjct: 207 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDM 266

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV++FNV+++   K GK+ EA+ L + MI  G+ PN   YN+LMDG+C+  R+
Sbjct: 267 TSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRL 326

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M    C  ++ +++ LI GYCK K ++  + L+ ++  +G+  + V Y+ L
Sbjct: 327 SEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSIL 386

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  ++E A +LF EM   GV  D   Y   +DGLC NG + +A+E+F  L+  K 
Sbjct: 387 VQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 446

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LDI  Y  +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A  
Sbjct: 447 NLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 506

Query: 362 LFLDME 367
           L   ME
Sbjct: 507 LLRKME 512



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 184/350 (52%), Gaps = 6/350 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF ++   G + ++ TYN+L+ GLC+ G     + L ++M +          PN +T
Sbjct: 224 AISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK------IIPNVIT 277

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +ID   KEG + +A EL+ +M  + I+PN +TYNSL+ G+C  N  +EA  +   M+
Sbjct: 278 FNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMV 337

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                P++V+F  ++   CK  ++DE  +L   + + G+  N   Y+ L+ GFC +G++ 
Sbjct: 338 RNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLE 397

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEELF  M S+G   +V +Y IL++G C N ++E AL ++ ++    +  D+V+Y  + 
Sbjct: 398 IAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIII 457

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+ +  +VE A+ LF  +   GV  +   Y   I GLCK G + EA  L R +     E
Sbjct: 458 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNE 517

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
            +   YN LI    + G L  + +L   +      AD  +  ++I  L +
Sbjct: 518 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSS 567



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 175/364 (48%), Gaps = 41/364 (11%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF+EM            P+ V ++    G+      +   +   KM+   I  N+ T
Sbjct: 49  AIDLFQEMIRSRP------LPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYT 102

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            N +I+ FC       A  +  ++M  G +P+  +FN ++N LC   K+ EA  L+  M+
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G +PN   YN++++G C +G  + A +L   M+    K +VF+YS +I+  C++  I+
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEI----------------------------- 248
            A+SL+ EM +KGIK  +V YN+L  GL +                              
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLI 282

Query: 249 ------HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                  +++ A +L+ EM   G++ +T  Y + +DG C    + EA  +   +      
Sbjct: 283 DVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCS 342

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            DI  +  LI G CK  R+    +LFR + +  L+A+ VTY+I++   C  GK++ A +L
Sbjct: 343 PDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEEL 402

Query: 363 FLDM 366
           F +M
Sbjct: 403 FQEM 406



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 146/287 (50%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A +LF +M      P++V ++    G      +N       +M   G+  N+ + N++
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  C+  K   A  +L  ++++G  P+   +NTL++G CL  +V+ A  L   M   GC
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV +Y+ ++NG CK+ +   AL L  +M  + +K DV  Y+T+   L     ++ A  
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM+  G+ +    Y + + GLCK G   + V+L + +   K   ++  +N LID   
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K G+L+ A EL++ +    +  + +TYN ++   C   ++ +A ++ 
Sbjct: 287 KEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 131/258 (50%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V F+   + +    + +      + M   G+  N +  N +
Sbjct: 47  DDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIM 106

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +   A  +   +  +G + +  +++ LING C   ++  A+ L + M+  G 
Sbjct: 107 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGC 166

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P+VV YN++  G+ +      A  L  +M    V AD + Y T ID LC++G I  A+ 
Sbjct: 167 QPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAIS 226

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LF+ +     +  +  YN L+ GLCK+G+     +L + +    +I +V+T+N++I    
Sbjct: 227 LFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFV 286

Query: 352 ADGKMDKARDLFLDMEAK 369
            +GK+ +A +L+ +M  K
Sbjct: 287 KEGKLQEANELYKEMITK 304



 Score = 48.9 bits (115), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  L   G +PNV TY  +I+GLC+ G    A  L  +M     E      PN  
Sbjct: 468 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNE------PNDC 521

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW-NEAKCLFIE 120
           TY T+I    ++G +  + +L  +MK    + +  +   +I     A  W  E +     
Sbjct: 522 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWWFKEPRRSPGV 581

Query: 121 MMDQGVQPNVVSFNVIMNEL 140
              +G Q  ++ FN I   L
Sbjct: 582 KRFRGTQAYLMPFNTITASL 601


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  281 bits (720), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 147/364 (40%), Positives = 216/364 (59%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +   K+   G +P+  T+ TLI GLC  G    AL+LF++M       G   +PN VT
Sbjct: 99  AFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM------IGEGFQPNVVT 152

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+GLCK+  V +A  +F +M  + I+PN+VTYNSLIHG C   +W     L  EM+
Sbjct: 153 YGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMV 212

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D  + P+V + N +++ LCK G + EA  ++++MI  GV PN   YN LMDG CL   V+
Sbjct: 213 DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVD 272

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F +M    C  NV SY+ LINGYCK + ++ A+ L+ EM  + + P+ V YNTL 
Sbjct: 273 VAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLI 332

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL  + +++ A  LF EM   G   D   YRT  D LCKN ++ +A+ L + +    ++
Sbjct: 333 HGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWD 392

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            DI+ Y  ++DG+C++G L+ A +LF +L    L  +V TYNIMIH LC  G + +A  L
Sbjct: 393 PDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452

Query: 363 FLDM 366
           F +M
Sbjct: 453 FSEM 456



 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 136/363 (37%), Positives = 204/363 (56%), Gaps = 19/363 (5%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L  ++  FG  P+V+T N LIN  C       A ++  ++     + G   +P+ VTY 
Sbjct: 602 SLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLL----KLGF--QPDVVTYG 655

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+++GLCK             M  + I+P++ TYNSLIH  C   +W     L  EM++ 
Sbjct: 656 TLMNGLCK-------------MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 702

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PNVV F+ +++ LCK G +  A  ++++MI+ GV P+   Y  LMDG CL   ++ A
Sbjct: 703 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 762

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ++F +M   GC  NV SY+ILINGYC+ + ++ A+ L  +M  +G+  D V YNTL  G
Sbjct: 763 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 822

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L  + +++ A  LF EM   G   D   YR  +D LCKN ++ EA+ L + +     + D
Sbjct: 823 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDAD 882

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  YN  IDG+C++G L+ A +LF +L    L  DV TYNIMIH LC  G +D+A  LF 
Sbjct: 883 ILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFR 942

Query: 365 DME 367
            M+
Sbjct: 943 KMD 945



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 149/271 (54%), Gaps = 6/271 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPNV TYN L++G C      VA+ +F+ M + +      C  N ++Y T+I+G CK 
Sbjct: 250 GVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD------CVANVISYNTLINGYCKI 303

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VDKA  LF +M  + + PN VTYN+LIHG C+     +A  LF EM+ +G  P++V++
Sbjct: 304 QSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTY 363

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             + + LCKN  +D+A  LL+ +      P+  +Y T++DG C  G +  A +LF ++ S
Sbjct: 364 RTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSS 423

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV++Y+I+I+G CK   +  A  L+SEM   G  P+   YN +  G    ++  R
Sbjct: 424 KGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALR 483

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             +L +EM   G + D       +  L  +G
Sbjct: 484 TIELLEEMLARGFSVDVSTTTLLVGMLSDDG 514



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 186/368 (50%), Gaps = 19/368 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++      P+   +  L+  + +  H    L+L  +M      FG+   P+  
Sbjct: 564 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM----DSFGI--PPDVY 617

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C    +  A  +  K+      P+VVTY +L++G C             +M
Sbjct: 618 TLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KM 664

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P++ ++N +++ LC   +    + LL  M+   + PN  V++T++D  C  G +
Sbjct: 665 ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMI 724

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M   G + +V +Y+ L++G+C   E++ A+ ++  M+ KG  P+V  YN L
Sbjct: 725 AIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNIL 784

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +I ++++A  L ++M   G+ ADT  Y T I GLC  G +  A+ LF  +     
Sbjct: 785 INGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQ 844

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  Y  L+D LCK+  L  A  L +++    L AD++ YNI I  +C  G+++ ARD
Sbjct: 845 IPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARD 904

Query: 362 LFLDMEAK 369
           LF ++ +K
Sbjct: 905 LFSNLSSK 912



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 160/294 (54%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A   F +M  +   P+ V +N L+         +    L  +M   G+ P+V +  +
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC   ++D A   L  ++++G +P+A  + TL+ G C+ G++  A  LF  M   G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV +Y  LING CK++++  A +++SEM++KGI P++V YN+L  GL ++ + +   
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L +EM    +  D +   T +D LCK G + EA ++   +     E ++  YN L+DG 
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C    + +A ++F ++     +A+V++YN +I+  C    +DKA  LF +M  +
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQ 319



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/324 (29%), Positives = 166/324 (51%), Gaps = 11/324 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VFT NT+++ LC+ G    A ++ + M +   E      PN VTY  ++DG C    V
Sbjct: 218 PDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE------PNVVTYNALMDGHCLRNEV 271

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A ++F  M  ++   NV++YN+LI+G+C     ++A  LF EM  Q + PN V++N +
Sbjct: 272 DVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTL 331

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC  G++ +A  L   M+  G  P+   Y TL D  C    +++A  L  ++E    
Sbjct: 332 IHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNW 391

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++  Y+ +++G C+  E+E A  L+S + SKG++P+V  YN +  GL +   +  A K
Sbjct: 392 DPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASK 451

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI---- 312
           LF EM ++G + +   Y     G  +N   +  +EL   +    + +D+     L+    
Sbjct: 452 LFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLS 511

Query: 313 -DGLCKSGRLKIAWELFRSLPRGV 335
            DGL +S +  +      S P G 
Sbjct: 512 DDGLDQSVKQILCKPSSSSRPSGT 535



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 180/411 (43%), Gaps = 59/411 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA+ LF ++   GC PN  TYN +  G  R    +  + L EEM A G   F V     T
Sbjct: 448 EASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG---FSVDVSTTT 504

Query: 61  VTYTTIIDG---------LCKEG---------------------------------FVDK 78
           +    + D          LCK                                    +D 
Sbjct: 505 LLVGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDD 564

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A   F +M   +  P+ V +  L+        ++    L  +M   G+ P+V + N+++N
Sbjct: 565 ALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILIN 624

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
             C   ++  A  +L  ++++G +P+   Y TLM+G C              M + G   
Sbjct: 625 SFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLC-------------KMITKGISP 671

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++F+Y+ LI+  C   E +   +L +EM++  I P+VV+++T+   L +   +  A  + 
Sbjct: 672 DIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 731

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           D M + GV  D   Y   +DG C    + EAV++F T+       ++R+YN LI+G C+ 
Sbjct: 732 DMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQI 791

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            R+  A  L   +    LIAD VTYN +IH LC  G++  A  LF +M A 
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 139/258 (53%), Gaps = 6/258 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV  ++T+++ LC+ G   +A ++ + M     E      P+ VTYT ++DG C    +
Sbjct: 706 PNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE------PDVVTYTALMDGHCLRSEM 759

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A ++F  M  +   PNV +YN LI+G+C     ++A  L  +M  QG+  + V++N +
Sbjct: 760 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 819

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC  G++  A  L   M+  G  P+   Y  L+D  C    +  A  L  ++E    
Sbjct: 820 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 879

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++  Y+I I+G C+  E+E A  L+S + SKG++PDV  YN +  GL +   ++ A K
Sbjct: 880 DADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANK 939

Query: 257 LFDEMQRHGVAADTWAYR 274
           LF +M  + + +++ + R
Sbjct: 940 LFRKMDENDIWSNSTSSR 957


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  281 bits (720), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 142/380 (37%), Positives = 222/380 (58%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +P+  TY T ++G+C+ G T+ ALNL  +M     E   + KPN 
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKME----EISHI-KPNV 253

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IIDGLCK+G    +  LF++M+D+ I PN+VTYN +I GFC +  W+ A+ L  E
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + PNVV++N ++N   K GK  EA+ L + M+  G+ PN   YN+++DGFC   R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE++F  M + GC  +VF+++ LI+GYC  K I+  + L  EM  +G+  + V YNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   +  +  A  L  +M   GV  D     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D+  YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F+ M +K
Sbjct: 554 LCKQSRLDEATQMFVSMGSK 573



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 164/349 (46%), Gaps = 54/349 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L+ ++   G  PN  TYN++I+G C+      A ++F  MA         C P+  
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVF 394

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+TT+IDG C    +D   EL  +M    +  N VTYN+LIHGFC   D N A  L  +M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  GV P++V+ N +++ LC NGK+                                   
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   Y++++DG C   R++ A ++FVSM S  
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI  D +IY TL  G  ++  +  A 
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            +F EM   GV  DT   R  + G      +  AV +   L+  +Y+L+
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ--RYQLE 681



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 186/386 (48%), Gaps = 46/386 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +N L+  + R     + ++L+++M        + C  +  ++T +I   C    +
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ----IRC--DIYSFTILIKCFCSCSKL 132

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+    ++P+VVT+ +L+HG C  +  +EA    +++  Q  +P+V++F  +
Sbjct: 133 PFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEA----LDLFHQICRPDVLTFTTL 188

Query: 137 MNELCKNGKMDEASRLLELMIQIG------------------------------------ 160
           MN LC+ G++ EA  LL+ M++ G                                    
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           ++PN  +Y+ ++DG C  GR + +  LF+ M+  G   N+ +Y+ +I G+C +     A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I P+VV YN L     +  +   A +L+DEM   G+  +T  Y + IDG 
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A ++F  +       D+  +  LIDG C + R+    EL   +PR  L+A+ 
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           VTYN +IH  C  G ++ A DL   M
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQM 454



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 5/251 (1%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF +M+     P+V+ FN +M  + +  + D    L + M +  +R + + +  L+  FC
Sbjct: 68  LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              ++  A   F  +  +G   +V +++ L++G C +  +  AL L+ ++     +PDV+
Sbjct: 128 SCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVL 183

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + TL  GL    +V  A  L D M  +G+  D   Y TF+DG+CK G  V A+ L R +
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243

Query: 297 RILKY-ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
             + + + ++  Y+ +IDGLCK GR   +  LF  +    +  ++VTYN MI   C  G+
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303

Query: 356 MDKARDLFLDM 366
              A+ L  +M
Sbjct: 304 WSAAQRLLQEM 314



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 5/225 (2%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +++A  L   M++    P+   +N LM       R +    L+  ME    + +++S++I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI  +C   ++  ALS + ++   G+ PDVV + TL  GL   H+V  A  LF ++ R  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   + T ++GLC+ G +VEAV L   +     + D   Y   +DG+CK G    A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 326 ELFRSLPRGVLI-ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L R +     I  +VV Y+ +I  LC DG+   + +LF++M+ K
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G  + K +E A+ L+S+ML     P V+ +N L   +  + + +    L+ +M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  A+  F  L  L    D+  +  L+ GLC   R+  A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +LF  + R     DV+T+  +++ LC +G++ +A
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEA 201


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  281 bits (720), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 142/380 (37%), Positives = 222/380 (58%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +P+  TY T ++G+C+ G T+ ALNL  +M     E   + KPN 
Sbjct: 199 VEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKME----EISHI-KPNV 253

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IIDGLCK+G    +  LF++M+D+ I PN+VTYN +I GFC +  W+ A+ L  E
Sbjct: 254 VIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQE 313

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + PNVV++N ++N   K GK  EA+ L + M+  G+ PN   YN+++DGFC   R
Sbjct: 314 MLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 373

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE++F  M + GC  +VF+++ LI+GYC  K I+  + L  EM  +G+  + V YNT
Sbjct: 374 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 433

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   +  +  A  L  +M   GV  D     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 434 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D+  YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 494 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F+ M +K
Sbjct: 554 LCKQSRLDEATQMFVSMGSK 573



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 165/350 (47%), Gaps = 53/350 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L+ ++   G  PN  TYN++I+G C+      A ++F  MA         C P+  
Sbjct: 341 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVF 394

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+TT+IDG C    +D   EL  +M    +  N VTYN+LIHGFC   D N A  L  +M
Sbjct: 395 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 454

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  GV P++V+ N +++ LC NGK+                                   
Sbjct: 455 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 514

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   Y++++DG C   R++ A ++FVSM S  
Sbjct: 515 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 574

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI  D +IY TL  G  ++  +  A 
Sbjct: 575 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 634

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-LKYELD 304
            +F EM   GV  DT   R  + G      +  AV +   L++ + Y+L+
Sbjct: 635 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGYQLE 684



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 186/386 (48%), Gaps = 46/386 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +N L+  + R     + ++L+++M        + C  +  ++T +I   C    +
Sbjct: 79  PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ----IRC--DIYSFTILIKCFCSCSKL 132

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+    ++P+VVT+ +L+HG C  +  +EA    +++  Q  +P+V++F  +
Sbjct: 133 PFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEA----LDLFHQICRPDVLTFTTL 188

Query: 137 MNELCKNGKMDEASRLLELMIQIG------------------------------------ 160
           MN LC+ G++ EA  LL+ M++ G                                    
Sbjct: 189 MNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISH 248

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           ++PN  +Y+ ++DG C  GR + +  LF+ M+  G   N+ +Y+ +I G+C +     A 
Sbjct: 249 IKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQ 308

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I P+VV YN L     +  +   A +L+DEM   G+  +T  Y + IDG 
Sbjct: 309 RLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 368

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A ++F  +       D+  +  LIDG C + R+    EL   +PR  L+A+ 
Sbjct: 369 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 428

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           VTYN +IH  C  G ++ A DL   M
Sbjct: 429 VTYNTLIHGFCLVGDLNAALDLSQQM 454



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 5/251 (1%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF +M+     P+V+ FN +M  + +  + D    L + M +  +R + + +  L+  FC
Sbjct: 68  LFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 127

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              ++  A   F  +  +G   +V +++ L++G C +  +  AL L+ ++     +PDV+
Sbjct: 128 SCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVL 183

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + TL  GL    +V  A  L D M  +G+  D   Y TF+DG+CK G  V A+ L R +
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKM 243

Query: 297 RILKY-ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
             + + + ++  Y+ +IDGLCK GR   +  LF  +    +  ++VTYN MI   C  G+
Sbjct: 244 EEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGR 303

Query: 356 MDKARDLFLDM 366
              A+ L  +M
Sbjct: 304 WSAAQRLLQEM 314



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 113/225 (50%), Gaps = 5/225 (2%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +++A  L   M++    P+   +N LM       R +    L+  ME    + +++S++I
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI  +C   ++  ALS + ++   G+ PDVV + TL  GL   H+V  A  LF ++ R  
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   + T ++GLC+ G +VEAV L   +     + D   Y   +DG+CK G    A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 326 ELFRSLPRGVLI-ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L R +     I  +VV Y+ +I  LC DG+   + +LF++M+ K
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDK 282



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G  + K +E A+ L+S+ML     P V+ +N L   +  + + +    L+ +M+R  
Sbjct: 52  LRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQ 111

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D +++   I   C    +  A+  F  L  L    D+  +  L+ GLC   R+  A 
Sbjct: 112 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL 171

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +LF  + R     DV+T+  +++ LC +G++ +A
Sbjct: 172 DLFHQICR----PDVLTFTTLMNGLCREGRVVEA 201


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  281 bits (719), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 142/318 (44%), Positives = 203/318 (63%), Gaps = 6/318 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V TY T+INGLC+ G T+ A  LF++M    GE G  C+P+ VTY+TIID LCK+
Sbjct: 5   GYQPDVHTYTTIINGLCKIGETVAAAGLFKKM----GEAG--CQPDVVTYSTIIDSLCKD 58

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++A ++F  MK + I+PN+ TYNSLI G C  + W EA  +  EMM   + PN+V+F
Sbjct: 59  RRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 118

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++++N  CK G + EA  +L+ M ++GV PN   Y++LM+G+ L   V  A +LF  M +
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GCK +VFSY+ILINGYCK K I  A  L++EM+ +G+ PD+V YNTL  GL ++ ++  
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLRE 238

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF  M  +G   D   Y   +DG CK GY+ +A  LFR ++    + ++  YN LID
Sbjct: 239 AHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILID 298

Query: 314 GLCKSGRLKIAWELFRSL 331
            +CKS  LK A +LF  L
Sbjct: 299 AMCKSRNLKEARKLFSEL 316



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 177/310 (57%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P+  TYTTII+GLCK G    A  LF KM +    P+VVTY+++I   C     NEA  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  M  +G+ PN+ ++N ++  LC   +  EAS +L  M+ + + PN   ++ L++ FC
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G V  A  +  +M  MG + NV +YS L+NGY    E+  A  L+  M++KG KPDV 
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN L  G  +  ++  A +LF+EM   G+  D  +Y T IDGLC+ G + EA +LF+ +
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+  Y+ L+DG CK G L  A+ LFR++    L  ++V YNI+I A+C    +
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 306

Query: 357 DKARDLFLDM 366
            +AR LF ++
Sbjct: 307 KEARKLFSEL 316



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 169/307 (55%), Gaps = 8/307 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           AA LF K+   GC+P+V TY+T+I+ LC+      AL++F  M A G         PN  
Sbjct: 29  AAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKG-------ISPNIF 81

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLC      +A  +  +M   NI PN+VT++ LI+ FC   +  EA+ +   M
Sbjct: 82  TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 141

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV+PNVV+++ +MN      ++ EA +L ++MI  G +P+ F YN L++G+C   R+
Sbjct: 142 TEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRI 201

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++LF  M   G   ++ SY+ LI+G C+   +  A  L+  ML+ G  PD+  Y+ L
Sbjct: 202 GEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSIL 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   + +AF+LF  MQ   +  +   Y   ID +CK+  + EA +LF  L +   
Sbjct: 262 LDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGL 321

Query: 302 ELDIRAY 308
           + +++ +
Sbjct: 322 QPNMKHW 328



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 159/275 (57%), Gaps = 6/275 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  ++  G  PN+FTYN+LI GLC       A  +  EM + N        PN V
Sbjct: 63  EALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN------IMPNIV 116

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +I+  CKEG V +A+ +   M +  + PNVVTY+SL++G+    +  EA+ LF  M
Sbjct: 117 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVM 176

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P+V S+N+++N  CK  ++ EA +L   MI  G+ P+   YNTL+DG C  GR+
Sbjct: 177 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 236

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF +M + G   ++ +YSIL++G+CK   +  A  L+  M S  +KP++V+YN L
Sbjct: 237 REAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNIL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
              + +   ++ A KLF E+   G+  +   ++ F
Sbjct: 297 IDAMCKSRNLKEARKLFSELFVQGLQPNMKHWKLF 331



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 154/277 (55%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+V TY ++I+G C   +   A  LF +M + G QP+VV+++ I++ LCK+ +++EA  
Sbjct: 7   QPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALD 66

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +   M   G+ PN F YN+L+ G C   R   A  +   M S+    N+ ++S+LIN +C
Sbjct: 67  IFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFC 126

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   +  A  +   M   G++P+VV Y++L  G     +V  A KLFD M   G   D +
Sbjct: 127 KEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVF 186

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           +Y   I+G CK   I EA +LF  +       DI +YN LIDGLC+ GRL+ A +LF+++
Sbjct: 187 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 246

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
                + D+ TY+I++   C  G + KA  LF  M++
Sbjct: 247 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 283



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 136/247 (55%), Gaps = 2/247 (0%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G QP+V ++  I+N LCK G+   A+ L + M + G +P+   Y+T++D  C   R
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           VN A ++F  M++ G   N+F+Y+ LI G C       A ++ +EM+S  I P++V + +
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF-S 119

Query: 241 LFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L I +F +   V  A  +   M   GV  +   Y + ++G      + EA +LF  +   
Sbjct: 120 LLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITK 179

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+ +YN LI+G CK+ R+  A +LF  +    L  D+V+YN +I  LC  G++ +A
Sbjct: 180 GCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREA 239

Query: 360 RDLFLDM 366
            DLF +M
Sbjct: 240 HDLFKNM 246



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 42/69 (60%)

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y+ D+  Y  +I+GLCK G    A  LF+ +       DVVTY+ +I +LC D ++++A 
Sbjct: 6   YQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 65

Query: 361 DLFLDMEAK 369
           D+F  M+AK
Sbjct: 66  DIFSYMKAK 74


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 141/366 (38%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++ V GC+P++ TY  +INGLC+ G   +ALNL  +M  G  E       + V
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------ADVV 241

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+T+ID LCK   VD A  LF +M ++ I P+V TY+SLI   C    W++A  L  +M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+FN +++   K GK+ EA +L + MIQ  + PN   YN+L++GFC+  R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+++F  M S  C  +V +Y+ LING+CK K++   + L+ +M  +G+  + V Y TL
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+    + A  +F +M   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E DI  YN + +G+CK+G+++  W+LF SL    +  DV+ YN MI   C  G  ++A  
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 362 LFLDME 367
           LF+ M+
Sbjct: 542 LFIKMK 547



 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 202/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   G +P+  T+ TL++GL +      A+ L E M          C+P+ V
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLV 206

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLCK G  D A  L  KM+   I  +VV Y+++I   C     ++A  LF EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+V +++ +++ LC  G+  +ASRLL  M++  + PN   +N+L+D F   G++
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+LF  M       N+ +Y+ LING+C +  ++ A  +++ M+SK   PDVV YNTL
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +V    +LF +M R G+  +T  Y T I G  +      A  +F+ +     
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  YN L+DGLCK+G+L+ A  +F  L +  +  D+ TYNIM   +C  GK++   D
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 507 LFCSLSLK 514



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 165/305 (54%), Gaps = 7/305 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N+LI+   + G  I A  LF+EM   +        PN VTY ++I+G C    +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS------IDPNIVTYNSLINGFCMHDRL 361

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A+++F  M  ++  P+VVTYN+LI+GFC A    +   LF +M  +G+  N V++  +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++   +    D A  + + M+  GV PN   YNTL+DG C  G++ +A  +F  ++    
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + ++++Y+I+  G CK  ++E    L+  +  KG+KPDV+ YNT+  G  +    E A+ 
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF +M+  G   D+  Y T I    ++G    + EL + +R  ++  D   Y  + D L 
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML- 600

Query: 317 KSGRL 321
             GRL
Sbjct: 601 HDGRL 605



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 192/371 (51%), Gaps = 12/371 (3%)

Query: 2   EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           EA  LF   +K R F   P++  ++ L++ + +     + ++  E+M       GV    
Sbjct: 48  EAVDLFGEMVKSRPF---PSIVEFSKLLSAIAKMKKFDLVISFGEKME----ILGV--SH 98

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  TY  +I+ LC+   +  A  +  KM      P++VT NSL++GFC+ N  +EA  L 
Sbjct: 99  NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M++ G QP+ V+F  +++ L ++ K  EA  L+E M+  G +P+   Y  +++G C  
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G  + A  L   ME    + +V  YS +I+  CK + ++ AL+L++EM +KGI+PDV  Y
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           ++L   L    +   A +L  +M    +  +   + + ID   K G ++EA +LF  +  
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +I  YN LI+G C   RL  A ++F  +     + DVVTYN +I+  C   K+  
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398

Query: 359 ARDLFLDMEAK 369
             +LF DM  +
Sbjct: 399 GMELFRDMSRR 409



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 96/280 (34%), Positives = 149/280 (53%), Gaps = 6/280 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++     +PN+ TYN+LING C       A  +F  M + +      C P+ 
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDV 380

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   V    ELF  M    +  N VTY +LIHGF  A+D + A+ +F +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++++N +++ LCKNGK+++A  + E + +  + P+ + YN + +G C  G+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF S+   G K +V +Y+ +I+G+CK    E A +L+ +M   G  PD   YNT
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           L            + +L  EM+    A D   Y    D L
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 5/271 (1%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           ++ N+L+H        +EA  LF EM+     P++V F+ +++ + K  K D      E 
Sbjct: 36  LSRNALLH-----LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEK 90

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M  +GV  N + YN +++  C   +++ A  +   M  +G   ++ + + L+NG+C    
Sbjct: 91  MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I  A++L  +M+  G +PD V + TL  GLF+ ++   A  L + M   G   D   Y  
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+GLCK G    A+ L   +   K E D+  Y+ +ID LCK   +  A  LF  +    
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  DV TY+ +I  LC  G+   A  L  DM
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/274 (27%), Positives = 135/274 (49%), Gaps = 10/274 (3%)

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG----KMDEASRLLEL 155
           SL   F +    + + CL      +G+  + +S++    +L +N     K+DEA  L   
Sbjct: 2   SLAKRFVHLRKASPSFCL------RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGE 55

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++    P+   ++ L+       + +        ME +G  HN+++Y+I+IN  C+  +
Sbjct: 56  MVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ 115

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  AL++  +M+  G  P +V  N+L  G    +++  A  L D+M   G   DT  + T
Sbjct: 116 LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 175

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            + GL ++    EAV L   + +   + D+  Y  +I+GLCK G   +A  L   + +G 
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + ADVV Y+ +I +LC    +D A +LF +M+ K
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  281 bits (718), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 145/366 (39%), Positives = 215/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+  +GC+PN  TY  ++N +C++G T +A+ L  +M   N       K + V
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 264

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ IIDGLCK G +D A  LF +M+ + I  N++TYN LI GFC A  W++   L  +M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVV+F+V+++   K GK+ EA  L + MI  G+ P+   Y +L+DGFC    +
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A ++   M S GC  N+ +++ILINGYCK   I+  L L+ +M  +G+  D V YNTL
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  E+ ++  A +LF EM    V  +   Y+  +DGLC NG   +A+E+F  +   K 
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           ELDI  YN +I G+C + ++  AW+LF SLP   +   V TYNIMI  LC  G + +A  
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564

Query: 362 LFLDME 367
           LF  ME
Sbjct: 565 LFRKME 570



 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 203/365 (55%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL  ++ + G   N++T + +IN  CR     +A +   ++     E      PNT+T++
Sbjct: 109 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE------PNTITFS 162

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+GLC EG V +A EL  +M +    P+++T N+L++G C +    EA  L  +M++ 
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN V++  ++N +CK+G+   A  LL  M +  ++ +A  Y+ ++DG C  G ++ A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  ME  G   N+ +Y+ILI G+C     +    L  +M+ + I P+VV ++ L   
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  ++  A +L  EM   G+A DT  Y + IDG CK  ++ +A ++   +     + +
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           IR +N LI+G CK+ R+    ELFR +    ++AD VTYN +I   C  GK++ A++LF 
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462

Query: 365 DMEAK 369
           +M ++
Sbjct: 463 EMVSR 467



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 183/364 (50%), Gaps = 10/364 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++ + G   N+ TYN LI G C  G       L  +M            PN VT
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK------INPNVVT 335

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           ++ +ID   KEG + +A+EL  +M    I P+ +TY SLI GFC  N  ++A  +   M+
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN+ +FN+++N  CK  ++D+   L   M   GV  +   YNTL+ GFC  G++N
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ELF  M S     N+ +Y IL++G C N E E AL ++ ++    ++ D+ IYN + 
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+    +V+ A+ LF  +   GV      Y   I GLCK G + EA  LFR +    + 
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   YN LI      G    + +L   L R     D  T  ++I  L +DG++ K+   
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKS--- 631

Query: 363 FLDM 366
           FLDM
Sbjct: 632 FLDM 635



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 148/291 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            D A +LF  M      P V+ ++ L         ++    L  +M  +G+  N+ + ++
Sbjct: 69  ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  K+  A   +  +I++G  PN   ++TL++G CL GRV+ A EL   M  MG
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K ++ + + L+NG C + +   A+ L  +M+  G +P+ V Y  +   + +  Q   A 
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M+   +  D   Y   IDGLCK+G +  A  LF  + +     +I  YN LI G 
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C +GR     +L R + +  +  +VVT++++I +   +GK+ +A +L  +M
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 111/225 (49%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K D+A  L   MI     P    ++ L      T + +    L   ME  G  HN+++ S
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+ +++  A S   +++  G +P+ + ++TL  GL    +V  A +L D M   
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D     T ++GLC +G   EA+ L   +     + +   Y  +++ +CKSG+  +A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            EL R +    +  D V Y+I+I  LC  G +D A +LF +ME K
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  280 bits (716), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 145/366 (39%), Positives = 215/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+  +GC+PN  TY  ++N +C++G T +A+ L  +M   N       K + V
Sbjct: 309 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 362

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ IIDGLCK G +D A  LF +M+ + I  N++TYN LI GFC A  W++   L  +M
Sbjct: 363 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 422

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVV+F+V+++   K GK+ EA  L + MI  G+ P+   Y +L+DGFC    +
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 482

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A ++   M S GC  N+ +++ILINGYCK   I+  L L+ +M  +G+  D V YNTL
Sbjct: 483 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  E+ ++  A +LF EM    V  +   Y+  +DGLC NG   +A+E+F  +   K 
Sbjct: 543 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 602

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           ELDI  YN +I G+C + ++  AW+LF SLP   +   V TYNIMI  LC  G + +A  
Sbjct: 603 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 662

Query: 362 LFLDME 367
           LF  ME
Sbjct: 663 LFRKME 668



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 203/365 (55%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL  ++ + G   N++T + +IN  CR     +A +   ++     E      PNT+T++
Sbjct: 207 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE------PNTITFS 260

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+GLC EG V +A EL  +M +    P+++T N+L++G C +    EA  L  +M++ 
Sbjct: 261 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 320

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN V++  ++N +CK+G+   A  LL  M +  ++ +A  Y+ ++DG C  G ++ A
Sbjct: 321 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 380

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  ME  G   N+ +Y+ILI G+C     +    L  +M+ + I P+VV ++ L   
Sbjct: 381 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 440

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  ++  A +L  EM   G+A DT  Y + IDG CK  ++ +A ++   +     + +
Sbjct: 441 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 500

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           IR +N LI+G CK+ R+    ELFR +    ++AD VTYN +I   C  GK++ A++LF 
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 560

Query: 365 DMEAK 369
           +M ++
Sbjct: 561 EMVSR 565



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 173/351 (49%), Gaps = 6/351 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++ + G   N+ TYN LI G C  G       L  +M            PN VT
Sbjct: 380 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK------INPNVVT 433

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           ++ +ID   KEG + +A+EL  +M    I P+ +TY SLI GFC  N  ++A  +   M+
Sbjct: 434 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 493

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN+ +FN+++N  CK  ++D+   L   M   GV  +   YNTL+ GFC  G++N
Sbjct: 494 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 553

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ELF  M S     N+ +Y IL++G C N E E AL ++ ++    ++ D+ IYN + 
Sbjct: 554 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 613

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+    +V+ A+ LF  +   GV      Y   I GLCK G + EA  LFR +    + 
Sbjct: 614 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 673

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
            D   YN LI      G    + +L   L R     D  T  ++I  L  D
Sbjct: 674 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDD 724



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 148/291 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            D A +LF  M      P V+ ++ L         ++    L  +M  +G+  N+ + ++
Sbjct: 167 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 226

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  K+  A   +  +I++G  PN   ++TL++G CL GRV+ A EL   M  MG
Sbjct: 227 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 286

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K ++ + + L+NG C + +   A+ L  +M+  G +P+ V Y  +   + +  Q   A 
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 346

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M+   +  D   Y   IDGLCK+G +  A  LF  + +     +I  YN LI G 
Sbjct: 347 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 406

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C +GR     +L R + +  +  +VVT++++I +   +GK+ +A +L  +M
Sbjct: 407 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 457



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 111/225 (49%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K D+A  L   MI     P    ++ L      T + +    L   ME  G  HN+++ S
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+ +++  A S   +++  G +P+ + ++TL  GL    +V  A +L D M   
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D     T ++GLC +G   EA+ L   +     + +   Y  +++ +CKSG+  +A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            EL R +    +  D V Y+I+I  LC  G +D A +LF +ME K
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 390


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 221/366 (60%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++FTY T++NGLC+ G   +AL+L ++M  G  E  VV      
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------ 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTTIID LC    V+ A  LF +M ++ I PNVVTYNSLI   C    W++A  L  +M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+F+ +++   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ +F  M S  C  NV +Y+ LI G+CK K +E  + L+ EM  +G+  + V YNTL
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+    + A K+F +M   GV  D   Y   +DGLCK G + +A+ +F  L+  K 
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E DI  YN +I+G+CK+G+++  W+LF SL    +  +V+ Y  MI   C  G  ++A  
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 362 LFLDME 367
           LF +M+
Sbjct: 557 LFREMK 562



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/369 (36%), Positives = 208/369 (56%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA AL  ++ V   +PN  T+NTLI+GL        A+ L + M A G       C+P+ 
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-------CQPDL 220

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T+++GLCK G +D A  L  KM+   I  +VV Y ++I   C   + N+A  LF E
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++PNVV++N ++  LC  G+  +ASRLL  MI+  + PN   ++ L+D F   G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  AE+L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P+VV YNT
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +VE   +LF EM + G+  +T  Y T I GL + G    A ++F+ +    
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              DI  Y+ L+DGLCK G+L+ A  +F  L +  +  D+ TYNIMI  +C  GK++   
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520

Query: 361 DLFLDMEAK 369
           DLF  +  K
Sbjct: 521 DLFCSLSLK 529



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 166/309 (53%), Gaps = 7/309 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T++ LI+   + G  + A  L++EM   +        P+  TY+++I+G C    +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIFTYSSLINGFCMHDRL 376

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+AK +F  M  ++  PNVVTYN+LI GFC A    E   LF EM  +G+  N V++N +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L + G  D A ++ + M+  GV P+   Y+ L+DG C  G++ +A  +F  ++    
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + ++++Y+I+I G CK  ++E    L+  +  KG+KP+V+IY T+  G       E A  
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM+  G   ++  Y T I    ++G    + EL + +R   +  D    + +I+ L 
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML- 615

Query: 317 KSGRLKIAW 325
             GRL+ ++
Sbjct: 616 HDGRLEKSY 624



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 186/385 (48%), Gaps = 41/385 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  +N L++ + +     + ++L E M N    +      +  +Y  +I+  C+   +
Sbjct: 78  PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------DLYSYNILINCFCRRSQL 131

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  +  KM      P++VT +SL++G+C+    +EA  L  +M     QPN V+FN +
Sbjct: 132 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTL 191

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L  + K  EA  L++ M+  G +P+ F Y T+++G C  G ++ A  L   ME    
Sbjct: 192 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL--------------- 241
           + +V  Y+ +I+  C  K +  AL+L++EM +KGI+P+VV YN+L               
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311

Query: 242 ----------------FIGLFEIHQVE----RAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
                           F  L +    E     A KL+DEM +  +  D + Y + I+G C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
            +  + EA  +F  +       ++  YN LI G CK+ R++   ELFR + +  L+ + V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431

Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
           TYN +I  L   G  D A+ +F  M
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKM 456



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 155/290 (53%), Gaps = 10/290 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++FTY++LING C       A ++FE M + +      C PN 
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 395

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V++  ELF +M    +  N VTYN+LI G   A D + A+ +F +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++++++++++ LCK GK+++A  + E + +  + P+ + YN +++G C  G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF S+   G K NV  Y+ +I+G+C+    E A +L+ EM   G  P+   YNT
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
           L            + +L  EM+  G   D       I    DG  +  Y+
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 128/255 (50%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V FN +++ + K  K D    L E M  + +  + + YN L
Sbjct: 62  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + ++ + S L+NGYC  K I  A++L  +M     
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P+ V +NTL  GLF  ++   A  L D M   G   D + Y T ++GLCK G I  A+ 
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E D+  Y  +ID LC    +  A  LF  +    +  +VVTYN +I  LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301

Query: 352 ADGKMDKARDLFLDM 366
             G+   A  L  DM
Sbjct: 302 NYGRWSDASRLLSDM 316



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 148/291 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A +LF +M      P++V +N L+      N ++    L   M +  +  ++ S+N+
Sbjct: 61  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  +L  M+++G  P+    ++L++G+C   R++ A  L   M  M 
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  +++ LI+G   + +   A++L   M+++G +PD+  Y T+  GL +   ++ A 
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  +M++  + AD   Y T ID LC    + +A+ LF  +       ++  YN LI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  +VVT++ +I A   +GK+ +A  L+ +M
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 116/225 (51%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+D+A  L   M+Q    P+   +N L+       + +    L   M+++   ++++SY+
Sbjct: 60  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN +C+  ++  AL++  +M+  G +PD+V  ++L  G     ++  A  L D+M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
               +T  + T I GL  +    EAV L   +     + D+  Y  +++GLCK G + +A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L + + +G + ADVV Y  +I ALC    ++ A +LF +M+ K
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 221/366 (60%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++FTY T++NGLC+ G   +AL+L ++M  G  E  VV      
Sbjct: 187 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------ 240

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTTIID LC    V+ A  LF +M ++ I PNVVTYNSLI   C    W++A  L  +M
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 300

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+F+ +++   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 301 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 360

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ +F  M S  C  NV +Y+ LI G+CK K +E  + L+ EM  +G+  + V YNTL
Sbjct: 361 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 420

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+    + A K+F +M   GV  D   Y   +DGLCK G + +A+ +F  L+  K 
Sbjct: 421 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E DI  YN +I+G+CK+G+++  W+LF SL    +  +V+ Y  MI   C  G  ++A  
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 540

Query: 362 LFLDME 367
           LF +M+
Sbjct: 541 LFREMK 546



 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/369 (36%), Positives = 208/369 (56%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA AL  ++ V   +PN  T+NTLI+GL        A+ L + M A G       C+P+ 
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-------CQPDL 204

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T+++GLCK G +D A  L  KM+   I  +VV Y ++I   C   + N+A  LF E
Sbjct: 205 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 264

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++PNVV++N ++  LC  G+  +ASRLL  MI+  + PN   ++ L+D F   G+
Sbjct: 265 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 324

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  AE+L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P+VV YNT
Sbjct: 325 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 384

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +VE   +LF EM + G+  +T  Y T I GL + G    A ++F+ +    
Sbjct: 385 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 444

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              DI  Y+ L+DGLCK G+L+ A  +F  L +  +  D+ TYNIMI  +C  GK++   
Sbjct: 445 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 504

Query: 361 DLFLDMEAK 369
           DLF  +  K
Sbjct: 505 DLFCSLSLK 513



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 166/309 (53%), Gaps = 7/309 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T++ LI+   + G  + A  L++EM   +        P+  TY+++I+G C    +
Sbjct: 307 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIFTYSSLINGFCMHDRL 360

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+AK +F  M  ++  PNVVTYN+LI GFC A    E   LF EM  +G+  N V++N +
Sbjct: 361 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 420

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L + G  D A ++ + M+  GV P+   Y+ L+DG C  G++ +A  +F  ++    
Sbjct: 421 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 480

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + ++++Y+I+I G CK  ++E    L+  +  KG+KP+V+IY T+  G       E A  
Sbjct: 481 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 540

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM+  G   ++  Y T I    ++G    + EL + +R   +  D    + +I+ L 
Sbjct: 541 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML- 599

Query: 317 KSGRLKIAW 325
             GRL+ ++
Sbjct: 600 HDGRLEKSY 608



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 186/385 (48%), Gaps = 41/385 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  +N L++ + +     + ++L E M N    +      +  +Y  +I+  C+   +
Sbjct: 62  PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------DLYSYNILINCFCRRSQL 115

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  +  KM      P++VT +SL++G+C+    +EA  L  +M     QPN V+FN +
Sbjct: 116 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTL 175

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L  + K  EA  L++ M+  G +P+ F Y T+++G C  G ++ A  L   ME    
Sbjct: 176 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 235

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL--------------- 241
           + +V  Y+ +I+  C  K +  AL+L++EM +KGI+P+VV YN+L               
Sbjct: 236 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 295

Query: 242 ----------------FIGLFEIHQVE----RAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
                           F  L +    E     A KL+DEM +  +  D + Y + I+G C
Sbjct: 296 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 355

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
            +  + EA  +F  +       ++  YN LI G CK+ R++   ELFR + +  L+ + V
Sbjct: 356 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 415

Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
           TYN +I  L   G  D A+ +F  M
Sbjct: 416 TYNTLIQGLFQAGDCDMAQKIFKKM 440



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 155/290 (53%), Gaps = 10/290 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++FTY++LING C       A ++FE M + +      C PN 
Sbjct: 326 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 379

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V++  ELF +M    +  N VTYN+LI G   A D + A+ +F +
Sbjct: 380 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 439

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++++++++++ LCK GK+++A  + E + +  + P+ + YN +++G C  G+
Sbjct: 440 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 499

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF S+   G K NV  Y+ +I+G+C+    E A +L+ EM   G  P+   YNT
Sbjct: 500 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 559

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
           L            + +L  EM+  G   D       I    DG  +  Y+
Sbjct: 560 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 609



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 128/255 (50%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V FN +++ + K  K D    L E M  + +  + + YN L
Sbjct: 46  DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 105

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + ++ + S L+NGYC  K I  A++L  +M     
Sbjct: 106 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 165

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P+ V +NTL  GLF  ++   A  L D M   G   D + Y T ++GLCK G I  A+ 
Sbjct: 166 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 225

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E D+  Y  +ID LC    +  A  LF  +    +  +VVTYN +I  LC
Sbjct: 226 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 285

Query: 352 ADGKMDKARDLFLDM 366
             G+   A  L  DM
Sbjct: 286 NYGRWSDASRLLSDM 300



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 148/291 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A +LF +M      P++V +N L+      N ++    L   M +  +  ++ S+N+
Sbjct: 45  LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  +L  M+++G  P+    ++L++G+C   R++ A  L   M  M 
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  +++ LI+G   + +   A++L   M+++G +PD+  Y T+  GL +   ++ A 
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  +M++  + AD   Y T ID LC    + +A+ LF  +       ++  YN LI  L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  +VVT++ +I A   +GK+ +A  L+ +M
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 335



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 116/225 (51%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+D+A  L   M+Q    P+   +N L+       + +    L   M+++   ++++SY+
Sbjct: 44  KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN +C+  ++  AL++  +M+  G +PD+V  ++L  G     ++  A  L D+M   
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
               +T  + T I GL  +    EAV L   +     + D+  Y  +++GLCK G + +A
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L + + +G + ADVV Y  +I ALC    ++ A +LF +M+ K
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 268


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 216/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     K+   G   N  +Y TLINGLC+ G T  AL L   +       G + +PN V
Sbjct: 160 QALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVV 213

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID +CK   V++A +L+ +M  + I+P+VVTYN+LI GFC      +A  LF +M
Sbjct: 214 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKM 273

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV +FN++++  CK  ++ EA  +L +M++ G++P+ F YN+LMD +CL   V
Sbjct: 274 IFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEV 333

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A+ +F ++   G   N+ SYSI+I+G+CK K+++ A++L+ EM    I PDVV YN+L
Sbjct: 334 NKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ ++  A KL DEM   GV  D   Y + +D LCKN  + +A+ L   ++    
Sbjct: 394 IDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 453

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  Y  L+DGLCK+GRL+ A  +F  L     I DV  Y  MI   C+ G  D++ D
Sbjct: 454 QPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLD 513

Query: 362 LFLDME 367
           L   ME
Sbjct: 514 LLSKME 519



 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/366 (35%), Positives = 198/366 (54%), Gaps = 8/366 (2%)

Query: 3   AAALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +AAL +  RV G   +PNV  YNT+I+ +C+      A +L+ EM +     G+   P+ 
Sbjct: 194 SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK----GI--SPDV 247

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I G C  G +  A +LF KM  ENINPNV T+N L+ GFC      EAK +   
Sbjct: 248 VTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAM 307

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM QG++P+V ++N +M+  C   ++++A  +   + Q GV PN   Y+ ++ GFC   +
Sbjct: 308 MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKK 367

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  LF  M       +V +Y+ LI+G CK  +I  AL L  EM  +G+  D + YN+
Sbjct: 368 VDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNS 427

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L + HQV++A  L  +M+  G+  D   Y T +DGLCKNG + +A  +F  L +  
Sbjct: 428 ILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKG 487

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y LD+  Y  +I G C  G    + +L   +     I + VTY I+I +L    + DKA 
Sbjct: 488 YILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAE 547

Query: 361 DLFLDM 366
            L  +M
Sbjct: 548 KLLREM 553



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 144/265 (54%), Gaps = 6/265 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   G +P+VFTYN+L++  C       A ++F  ++    + GV   PN  
Sbjct: 300 EAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTIS----QRGV--NPNIH 353

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ +I G CK   VD+A  LF +M   NI P+VVTYNSLI G C     + A  L  EM
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 413

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+GV  + +++N I++ LCKN ++D+A  LL  M   G++P+   Y TL+DG C  GR+
Sbjct: 414 HDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRL 473

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  +   G   +V  Y+ +I G+C +   + +L L S+M   G  P+ V Y  +
Sbjct: 474 EDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEII 533

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
              LF+  + ++A KL  EM   G+
Sbjct: 534 ICSLFDKDENDKAEKLLREMITRGL 558



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 142/278 (51%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           +  +N  P++  +  ++     +N ++    L  +M   G+  ++V  ++++N   + G+
Sbjct: 63  LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
              +  +L  ++++G  PN     TL+ G CL G++++A +    + ++G   N  SY  
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING CK  +   AL L   +  K ++P+VV+YNT+   + ++  V  AF L+ EM   G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           ++ D   Y   I G C  G + +A +LF  +       ++  +N L+DG CK  RLK A 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +   + +  +  DV TYN ++   C   +++KA+ +F
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIF 340



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 89/173 (51%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K ++F +  ++    K+      +SL+ +M   GI  D+VI + L     ++ Q   +F 
Sbjct: 69  KPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFS 128

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  ++ + G   +     T I GLC  G I +A++    +  L + L+  +Y  LI+GLC
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G+   A +L R +   ++  +VV YN +I ++C    +++A DL+ +M +K
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSK 241


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 135/366 (36%), Positives = 218/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GC+P++ TYN+++NG+CR+G T +A ++  +M   N       K +  
Sbjct: 176 KAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN------VKADVF 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+TIID LC++G +D A  LF +M+ + I  +VVTYNSL+ G C A  WN+   L  +M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV++FNV+++   K GK+ EA+ L + MI  G+ PN   YNTLMDG+C+  R+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M    C  ++ +++ LI GYC  K ++  + ++  +  +G+  + V Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++ A +LF EM  HGV  D   Y   +DGLC NG + +A+E+F  L+  K 
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L I  Y  +I+G+CK G+++ AW LF SLP   +  +V+TY +MI  LC  G + +A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 362 LFLDME 367
           L   ME
Sbjct: 530 LLRKME 535



 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 201/367 (54%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T+NTLINGLC  G    A+ L + M   NG     C+P+ VT
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVE-NG-----CQPDMVT 195

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y +I++G+C+ G    A ++  KM++ N+  +V TY+++I   C     + A  LF EM 
Sbjct: 196 YNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +VV++N ++  LCK GK ++ + LL+ M+   + PN   +N L+D F   G++ 
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL+  M + G   N+ +Y+ L++GYC    +  A ++   M+     PD+V + +L 
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + +V+   K+F  + + G+ A+   Y   + G C++G I  A ELF+ +      
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y  L+DGLC +G+L+ A E+F  L +  +   +V Y  +I  +C  GK++ A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495

Query: 363 FLDMEAK 369
           F  +  K
Sbjct: 496 FCSLPCK 502



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 200/402 (49%), Gaps = 43/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           +A ALF ++      P +  ++   + + RT    + L+  +++  NG          N 
Sbjct: 71  DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-------NI 123

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T   +I+  C+      A  +  K+      P+  T+N+LI+G C     ++A  L   
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDR 183

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G QP++V++N I+N +C++G    A  +L  M +  V+ + F Y+T++D  C  G 
Sbjct: 184 MVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCK---------------NKEI--------- 216
           ++ A  LF  ME+ G K +V +Y+ L+ G CK               ++EI         
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 217 -------EGALS----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                  EG L     LY EM+++GI P+++ YNTL  G    +++  A  + D M R+ 
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
            + D   + + I G C    + + +++FR +       +   Y+ L+ G C+SG++K+A 
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ELF+ +    ++ DV+TY I++  LC +GK++KA ++F D++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 153/299 (51%), Gaps = 6/299 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N L++   + G    A  L++EM       G+   PN +TY T++DG C +  +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR----GI--SPNIITYNTLMDGYCMQNRL 349

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  +   M     +P++VT+ SLI G+C     ++   +F  +  +G+  N V+++++
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C++GK+  A  L + M+  GV P+   Y  L+DG C  G++ +A E+F  ++    
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              +  Y+ +I G CK  ++E A +L+  +  KG+KP+V+ Y  +  GL +   +  A  
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           L  +M+  G A +   Y T I    ++G +  + +L   ++   +  D  +   +ID L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 4/245 (1%)

Query: 129 NVVSFNVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           ++ + NV   E  ++G    K D+A  L + MI+    P    ++        T + N  
Sbjct: 48  SITNGNVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLV 107

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +    +E  G  HN+++ +I+IN +C+  +   A S+  +++  G +PD   +NTL  G
Sbjct: 108 LDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLING 167

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    +V +A  L D M  +G   D   Y + ++G+C++G    A ++ R +     + D
Sbjct: 168 LCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKAD 227

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+ +ID LC+ G +  A  LF+ +    + + VVTYN ++  LC  GK +    L  
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287

Query: 365 DMEAK 369
           DM ++
Sbjct: 288 DMVSR 292


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 141/353 (39%), Positives = 217/353 (61%), Gaps = 6/353 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C  N FTY  +I+ LC+ G  I  L +F EM N       +C PN + Y+++I+GLC+ G
Sbjct: 75  CSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG-----IC-PNVIVYSSLINGLCRVG 128

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            + +A  LF +M  + I  NV+TYNSLIH  C    W EA   F +M+ +G+ P+VV+F 
Sbjct: 129 KLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFT 188

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ L K GK+ EA ++ ELMI+ G  PN   YN+L++G CL  +++ A  LF  M   
Sbjct: 189 TLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVER 248

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G K +V SY+ LINGYC + + E A++L+ +M  + + P +  Y  L   L++  ++  A
Sbjct: 249 GIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTA 308

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +LF+ MQ  G +     Y   +DGLCKNG I EA+++FR+L+ +KY+  IR Y+ LI G
Sbjct: 309 KELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGG 368

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + ++ R + A E+F  +P   L+ ++VTYNIMI+ LC +GK+ +A  LF+ ME
Sbjct: 369 MFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQME 421



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 205/393 (52%), Gaps = 29/393 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----- 55
           ++   +F ++   G  PNV  Y++LINGLCR G    A+NLF+EM +   +  V+     
Sbjct: 96  IKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSL 155

Query: 56  ----CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
               C+                    P+ VT+TT+ID L K+G V +A ++F  M  +  
Sbjct: 156 IHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGE 215

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            PN+VTYNSL++G C  +  + A  LF  M+++G++ +V+S+N ++N  C +GK +EA  
Sbjct: 216 APNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMT 275

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L   M    + P+   Y  L+      GR+  A+ELF +M+  G   ++ +Y++L++G C
Sbjct: 276 LFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLC 335

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN  IE A+ ++  + S   KP + IY+ L  G+F+  + E A ++FDE+   G+  +  
Sbjct: 336 KNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIV 395

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   I+GLCK G ++EA  LF  +     E D  ++N +I G  +  +++ A E  + +
Sbjct: 396 TYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRM 455

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
                  +     ++++   AD +  +  + FL
Sbjct: 456 REKNFSPNDSVTLMLVNLYAADAQSSELPNNFL 488



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 173/311 (55%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +PN VT +T++ G+C EG V  A ELF KM       +++ Y  LI+          A  
Sbjct: 6   QPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVE 65

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   M+ +    N  ++ ++++ LCK+G   +  ++   MI +G+ PN  VY++L++G C
Sbjct: 66  LHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLC 125

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G++  A  LF  M S G K NV +Y+ LI+  C+    + A   +S+M+ +GI PDVV
Sbjct: 126 RVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVV 185

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + TL   L +  +V+ A+K+F+ M + G A +   Y + ++GLC +  +  AV LF  +
Sbjct: 186 TFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVM 245

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                ++D+ +YN LI+G C SG+ + A  LFR +    L   + TY I++ AL  +G++
Sbjct: 246 VERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRI 305

Query: 357 DKARDLFLDME 367
             A++LF +M+
Sbjct: 306 RTAKELFNNMQ 316



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 129/242 (53%)

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G QPN+V+ + ++  +C  GK+ +A  L + M + G + +  +Y  L++    T + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA EL   M S  C  N F+Y ++I+  CK+      L ++ EM++ GI P+V++Y++L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + ++  A  LFDEM   G+ A+   Y + I   C+ G   EA   F  +     
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  +  LID L K G+++ A+++F  + +     ++VTYN +++ LC   +MD A  
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 362 LF 363
           LF
Sbjct: 241 LF 242



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 53/172 (30%), Positives = 91/172 (52%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G + N+ + S L+ G C   ++  AL L+ +M   G + D+++Y  L   L +  Q  RA
Sbjct: 4   GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L   M     + + + Y   ID LCK+G  ++ +++FR +  +    ++  Y+ LI+G
Sbjct: 64  VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LC+ G+L+ A  LF  +    + A+V+TYN +IHA C  G   +A   F  M
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQM 175


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 159/420 (37%), Positives = 221/420 (52%), Gaps = 60/420 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G  P+V TY TLINGLC+ G+T  A+ L   M   N      C+PN  
Sbjct: 149 EALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKN------CQPNVF 202

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LCK+  V +A  LF +M  + I+P++ TYNSLIH  C   +W     L  EM
Sbjct: 203 AYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEM 262

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  + P+VVSFN +++ LCK GK+ EA  +++ MIQ GV PN   Y  LMDG CL   +
Sbjct: 263 VDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEM 322

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL-------------------SL 222
           + A ++F +M   GC  NV SY+ LINGYCK + I+ A+                    +
Sbjct: 323 DEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKV 382

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG--- 279
           +  M+ KG  P+V+ YNTL  G  +I ++++A  LF EM R  +  DT  Y T I G   
Sbjct: 383 FDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCH 442

Query: 280 --------------------------------LCKNGYIVEAVELFRTLRILKYELDIRA 307
                                           LCKN Y+ EA+ L + +     + DI+ 
Sbjct: 443 VERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV 502

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            N  IDG+C++G L+ A +LF +L    L  DV TY+IMI+ LC  G +D+A  LF +M+
Sbjct: 503 NNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMD 562



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 159/306 (51%), Gaps = 13/306 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVA-------------LNLFEEMANG 48
           EA  +F  +   GC PNV +YNTLING C+      A             LN+ E +   
Sbjct: 324 EAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVF 383

Query: 49  NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 108
           +      C PN ++Y T+I+G CK   +DKA  LF +M  + + P+ VTY++LIHG C+ 
Sbjct: 384 DTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV 443

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
               +A  LF EM+     PN+V++ ++++ LCKN  + EA  LL+ +    + P+  V 
Sbjct: 444 ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 503

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N  +DG C  G +  A +LF ++ S G + +V++YSI+ING C+   ++ A  L+ EM  
Sbjct: 504 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 563

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G   +  IYNT+  G    ++  RA +L  EM   G +AD      F+  L  +G    
Sbjct: 564 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS 623

Query: 289 AVELFR 294
             ++ R
Sbjct: 624 LKQILR 629



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 159/302 (52%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+TV +  ++  + K         L  +M    I PN+ T + LI+ FC+ N    A  +
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+  +F  ++  +C  GK+ EA  L + MI  G RP+   Y TL++G C 
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G  + A  L  SM    C+ NVF+Y+ +I+  CK++++  A +L+SEM++KGI PD+  
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN+L   L  + + +    L +EM    +  D  ++ T +D LCK G + EA ++   + 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E ++  Y  L+DG C    +  A ++F ++     + +V++YN +I+  C   ++D
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 358 KA 359
           KA
Sbjct: 359 KA 360



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 25/348 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G EPNV TY  L++G C       A+ +F+ M          C PN +
Sbjct: 289 EAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKG------CMPNVI 342

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMK--------DENIN-----------PNVVTYNSLI 102
           +Y T+I+G CK   +DKA      M         DE +            PNV++YN+LI
Sbjct: 343 SYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLI 402

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
           +G+C     ++A  LF EM  Q + P+ V+++ +++ LC   ++ +A  L   M+     
Sbjct: 403 NGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI 462

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN   Y  L+D  C    +  A  L  ++E      ++   +I I+G C+  E+E A  L
Sbjct: 463 PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDL 522

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +S + SKG++PDV  Y+ +  GL     ++ A KLF EM  +G   +   Y T   G  +
Sbjct: 523 FSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLR 582

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           N     A++L + +    +  D       +  L   G  +   ++ R+
Sbjct: 583 NNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRN 630



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 142/294 (48%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M      P+ V +N L+         +    L  +M   G+ PN+ + ++
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  ++++G +P+   + TL+ G C+ G++  A  LF  M   G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG 161

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +V +Y  LING CK      A+ L   M+ K  +P+V  YNT+   L +  QV  AF
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++ D + Y + I  LC          L   +   K   D+ ++N ++D L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G++  A ++   + +  +  +VVTY  ++   C   +MD+A  +F  M  K
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCK 335


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 218/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+PN+ TY  ++NGLC+ G T +ALNL  +M     E  VV      
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV------ 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + TIID LCK   VD A  LF +M+ + I PNVVTY+SLI   C    W++A  L  +M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+V+FN +++   K GK  EA +L + MI+  + P+ F YN+L++GFC+  R+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A+++F  M S  C  +V +Y+ LI G+CK+K +E    L+ EM  +G+  D V Y TL
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF     + A K+F +M   GV  D   Y   +DGLC NG + +A+E+F  ++  + 
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LDI  Y  +I+G+CK+G++   W+LF SL    +  +VVTYN MI  LC+   + +A  
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561

Query: 362 LFLDME 367
           L   M+
Sbjct: 562 LLKKMK 567



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 199/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G  P+  T+ TLI+GL        A+ L + M          C+PN V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 226

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G  D A  L  KM+   I  +VV +N++I   C     ++A  LF EM
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVV+++ +++ LC  G+  +AS+LL  MI+  + PN   +N L+D F   G+ 
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L+  M       ++F+Y+ L+NG+C +  ++ A  ++  M+SK   PDVV YNTL
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +VE   +LF EM   G+  DT  Y T I GL  +G    A ++F+ +     
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  Y+ L+DGLC +G+L+ A E+F  + +  +  D+  Y  MI  +C  GK+D   D
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 527 LFCSLSLK 534



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 162/305 (53%), Gaps = 7/305 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN+ T+N LI+   + G  + A  L+++M   +        P+  TY ++++G C    +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS------IDPDIFTYNSLVNGFCMHDRL 381

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKAK++F  M  ++  P+VVTYN+LI GFC +    +   LF EM  +G+  + V++  +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L  +G  D A ++ + M+  GV P+   Y+ L+DG C  G++ +A E+F  M+    
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +++ Y+ +I G CK  +++    L+  +  KG+KP+VV YNT+  GL     ++ A+ 
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M+  G   ++  Y T I    ++G    + EL R +R  ++  D      L+  + 
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 620

Query: 317 KSGRL 321
             GRL
Sbjct: 621 HDGRL 625



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  +N L++ + +     V ++L E+M       G+       TY  +I+  C+   +
Sbjct: 83  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY------TYNILINCFCRRSQI 136

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  L  KM      P++VT +SL++G+C+    ++A  L  +M++ G +P+ ++F  +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L  + K  EA  L++ M+Q G +PN   Y  +++G C  G  + A  L   ME+   
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +V  ++ +I+  CK + ++ AL+L+ EM +KGI+P+VV Y++L   L    +   A +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M    +  +   +   ID   K G  VEA +L+  +     + DI  YN L++G C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              RL  A ++F  +       DVVTYN +I   C   +++   +LF +M  +
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 169/324 (52%), Gaps = 4/324 (1%)

Query: 50  GEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           G FG + K    P+ V +  ++  + K    D    L  KM+   I   + TYN LI+ F
Sbjct: 71  GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C  +  + A  L  +MM  G +P++V+ + ++N  C   ++ +A  L++ M+++G RP+ 
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             + TL+ G  L  + + A  L   M   GC+ N+ +Y +++NG CK  + + AL+L ++
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M +  I+ DVVI+NT+   L +   V+ A  LF EM+  G+  +   Y + I  LC  G 
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
             +A +L   +   K   ++  +N LID   K G+   A +L+  + +  +  D+ TYN 
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           +++  C   ++DKA+ +F  M +K
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSK 394



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 145/262 (55%), Gaps = 6/262 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+  +     +P++FTYN+L+NG C       A  +FE M + +      C P+ 
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDV 400

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V+   ELF +M    +  + VTY +LI G  +  D + A+ +F +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++++++++++ LC NGK+++A  + + M +  ++ + ++Y T+++G C  G+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+   +LF S+   G K NV +Y+ +I+G C  + ++ A +L  +M   G  P+   YNT
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580

Query: 241 LFIGLFEIHQVERAFKLFDEMQ 262
           L            + +L  EM+
Sbjct: 581 LIRAHLRDGDKAASAELIREMR 602



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 135/272 (49%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y  ++    +    ++A  LF  M+     P++V FN +++ + K  K D    L E M 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++ +    + YN L++ FC   +++ A  L   M  +G + ++ + S L+NGYC  K I 
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L  +M+  G +PD + + TL  GLF  ++   A  L D M + G   +   Y   +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLCK G    A+ L   +   K E D+  +N +ID LCK   +  A  LF+ +    + 
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +VVTY+ +I  LC+ G+   A  L  DM  K
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 146/291 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF  M      P++V +N L+        ++    L  +M    +   + ++N+
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  LL  M+++G  P+    ++L++G+C   R++ A  L   M  MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +  +++ LI+G   + +   A++L   M+ +G +P++V Y  +  GL +    + A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M+   + AD   + T ID LCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A +L   +    +  ++VT+N +I A   +GK  +A  L+ DM
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 142/366 (38%), Positives = 218/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+PN+ TY  ++NGLC+ G T +ALNL  +M     E       + V
Sbjct: 170 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIE------ADVV 223

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + TIID LCK   VD A  LF +M+ + I PNVVTY+SLI   C    W++A  L  +M
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 283

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+V+FN +++   K GK  EA +L + MI+  + P+ F YN+L++GFC+  R+
Sbjct: 284 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 343

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A+++F  M S  C  +V +Y+ LI G+CK+K +E    L+ EM  +G+  D V Y TL
Sbjct: 344 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF     + A K+F +M   GV  D   Y   +DGLC NG + +A+E+F  ++  + 
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LDI  Y  +I+G+CK+G++   W+LF SL    +  +VVTYN MI  LC+   + +A  
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523

Query: 362 LFLDME 367
           L   M+
Sbjct: 524 LLKKMK 529



 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 199/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G  P+  T+ TLI+GL        A+ L + M          C+PN V
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 188

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G  D A  L  KM+   I  +VV +N++I   C     ++A  LF EM
Sbjct: 189 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 248

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVV+++ +++ LC  G+  +AS+LL  MI+  + PN   +N L+D F   G+ 
Sbjct: 249 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 308

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L+  M       ++F+Y+ L+NG+C +  ++ A  ++  M+SK   PDVV YNTL
Sbjct: 309 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 368

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +VE   +LF EM   G+  DT  Y T I GL  +G    A ++F+ +     
Sbjct: 369 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 428

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  Y+ L+DGLC +G+L+ A E+F  + +  +  D+  Y  MI  +C  GK+D   D
Sbjct: 429 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 488

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 489 LFCSLSLK 496



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 162/305 (53%), Gaps = 7/305 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN+ T+N LI+   + G  + A  L+++M   +        P+  TY ++++G C    +
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS------IDPDIFTYNSLVNGFCMHDRL 343

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKAK++F  M  ++  P+VVTYN+LI GFC +    +   LF EM  +G+  + V++  +
Sbjct: 344 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L  +G  D A ++ + M+  GV P+   Y+ L+DG C  G++ +A E+F  M+    
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +++ Y+ +I G CK  +++    L+  +  KG+KP+VV YNT+  GL     ++ A+ 
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M+  G   ++  Y T I    ++G    + EL R +R  ++  D      L+  + 
Sbjct: 524 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 582

Query: 317 KSGRL 321
             GRL
Sbjct: 583 HDGRL 587



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  +N L++ + +     V ++L E+M       G+       TY  +I+  C+   +
Sbjct: 45  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY------TYNILINCFCRRSQI 98

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  L  KM      P++VT +SL++G+C+    ++A  L  +M++ G +P+ ++F  +
Sbjct: 99  SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 158

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L  + K  EA  L++ M+Q G +PN   Y  +++G C  G  + A  L   ME+   
Sbjct: 159 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 218

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +V  ++ +I+  CK + ++ AL+L+ EM +KGI+P+VV Y++L   L    +   A +
Sbjct: 219 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 278

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M    +  +   +   ID   K G  VEA +L+  +     + DI  YN L++G C
Sbjct: 279 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 338

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              RL  A ++F  +       DVVTYN +I   C   +++   +LF +M  +
Sbjct: 339 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 391



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/324 (29%), Positives = 169/324 (52%), Gaps = 4/324 (1%)

Query: 50  GEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           G FG + K    P+ V +  ++  + K    D    L  KM+   I   + TYN LI+ F
Sbjct: 33  GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 92

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C  +  + A  L  +MM  G +P++V+ + ++N  C   ++ +A  L++ M+++G RP+ 
Sbjct: 93  CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 152

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             + TL+ G  L  + + A  L   M   GC+ N+ +Y +++NG CK  + + AL+L ++
Sbjct: 153 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 212

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M +  I+ DVVI+NT+   L +   V+ A  LF EM+  G+  +   Y + I  LC  G 
Sbjct: 213 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 272

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
             +A +L   +   K   ++  +N LID   K G+   A +L+  + +  +  D+ TYN 
Sbjct: 273 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 332

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           +++  C   ++DKA+ +F  M +K
Sbjct: 333 LVNGFCMHDRLDKAKQMFEFMVSK 356



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 145/262 (55%), Gaps = 6/262 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+  +     +P++FTYN+L+NG C       A  +FE M + +      C P+ 
Sbjct: 309 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDV 362

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V+   ELF +M    +  + VTY +LI G  +  D + A+ +F +
Sbjct: 363 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 422

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++++++++++ LC NGK+++A  + + M +  ++ + ++Y T+++G C  G+
Sbjct: 423 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 482

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+   +LF S+   G K NV +Y+ +I+G C  + ++ A +L  +M   G  P+   YNT
Sbjct: 483 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 542

Query: 241 LFIGLFEIHQVERAFKLFDEMQ 262
           L            + +L  EM+
Sbjct: 543 LIRAHLRDGDKAASAELIREMR 564



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 135/272 (49%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y  ++    +    ++A  LF  M+     P++V FN +++ + K  K D    L E M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++ +    + YN L++ FC   +++ A  L   M  +G + ++ + S L+NGYC  K I 
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 134

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L  +M+  G +PD + + TL  GLF  ++   A  L D M + G   +   Y   +
Sbjct: 135 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 194

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLCK G    A+ L   +   K E D+  +N +ID LCK   +  A  LF+ +    + 
Sbjct: 195 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 254

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +VVTY+ +I  LC+ G+   A  L  DM  K
Sbjct: 255 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 286



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 146/291 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF  M      P++V +N L+        ++    L  +M    +   + ++N+
Sbjct: 28  LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  LL  M+++G  P+    ++L++G+C   R++ A  L   M  MG
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +  +++ LI+G   + +   A++L   M+ +G +P++V Y  +  GL +    + A 
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M+   + AD   + T ID LCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 208 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 267

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A +L   +    +  ++VT+N +I A   +GK  +A  L+ DM
Sbjct: 268 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 318


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++ TY  ++NGLC+ G T +A  L  +M  G  E      P  +
Sbjct: 204 EAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLE------PGVL 257

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTTIIDGLCK   +D A  LF +M+ + I PNVVTY+SLI   C    W++A  L  +M
Sbjct: 258 IYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+V +F+ +++   K GK+ EA +L + M++  + P+   Y++L++GFC+  R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+++F  M S  C  +V SYS LI G+CK K ++  + L+ EM  +G+  + V Y TL
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+    + A ++F EM   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E  I  YN +I+G+CK+G+++  W+LF +L    +  DVV YN MI   C  G  ++A  
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557

Query: 362 LFLDME 367
           LF +M+
Sbjct: 558 LFKEMK 563



 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/369 (36%), Positives = 209/369 (56%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA AL  ++ V G +PN  T+NTLI+GL        A+ L + M A G       C+P+ 
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKG-------CQPDL 221

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +++GLCK G  D A  L  KM+   + P V+ Y ++I G C     ++A  LF E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKE 281

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PNVV+++ +++ LC  G+  +ASRLL  MI+  + P+ F ++ L+D F   G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  AE+L+  M       ++ +YS LING+C +  ++ A  ++  M+SK   PDVV Y+T
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYST 401

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +V+   +LF EM + G+  +T  Y T I GL + G    A E+F+ +    
Sbjct: 402 LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +I  YN L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK++   
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521

Query: 361 DLFLDMEAK 369
           DLF ++  K
Sbjct: 522 DLFCNLSLK 530



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/371 (29%), Positives = 192/371 (51%), Gaps = 12/371 (3%)

Query: 2   EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A ALF   +K R F   P++  ++ L++ + +     V ++L E+M N      +    
Sbjct: 64  DAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQN------LGMPH 114

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  TY+ +I+  C+   +  A  +  KM      PN+VT +SL++G+C++   +EA  L 
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M   G QPN V+FN +++ L  + K  EA  L++ M+  G +P+   Y  +++G C  
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKR 234

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G  + A  L   ME    +  V  Y+ +I+G CKNK ++ AL+L+ EM +KGI+P+VV Y
Sbjct: 235 GDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTY 294

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           ++L   L    +   A +L  +M    +  D + +   ID   K G +VEA +L+  +  
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +  I  Y+ LI+G C   RL  A ++F  +       DVV+Y+ +I   C   ++D+
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDE 414

Query: 359 ARDLFLDMEAK 369
             +LF +M  +
Sbjct: 415 GMELFREMSQR 425



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 149/270 (55%), Gaps = 6/270 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++ TY++LING C       A  +FE M + +      C P+ 
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 396

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y+T+I G CK   VD+  ELF +M    +  N VTY +LI G   A D + A+ +F E
Sbjct: 397 VSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKE 456

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++++N +++ LCKNGK+++A  + E + +  + P  + YN +++G C  G+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF ++   G K +V +Y+ +I+G+C+    E A +L+ EM   G  P+   YNT
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           L          E + +L  EM+  G A D 
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDA 606



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 129/255 (50%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P+++ F+ +++ + K  K D    L E M  +G+  N + Y+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSIL 122

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + N+ + S L+NGYC +K I  A++L  +M   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P+ V +NTL  GLF  ++   A  L D M   G   D   Y   ++GLCK G    A  
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFI 242

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +   K E  +  Y  +IDGLCK+  +  A  LF+ +    +  +VVTY+ +I  LC
Sbjct: 243 LLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 352 ADGKMDKARDLFLDM 366
             G+   A  L  DM
Sbjct: 303 NYGRWSDASRLLSDM 317



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 152/291 (52%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF +M      P+++ ++ L+      N ++    L  +M + G+  N  ++++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  +L  M+++G  PN    ++L++G+C + R++ A  L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  +++ LI+G   + +   A++L   M++KG +PD+V Y  +  GL +    + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M++  +      Y T IDGLCKN ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  DV T++ +I A   +GK+ +A  L+ +M
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/207 (33%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF ++   G   N  TY TLI GL + G   +A  +F+EM +     GV   PN +
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD----GV--PPNIM 467

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++DGLCK G ++KA  +F  ++   + P + TYN +I G C A    +   LF  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+P+VV++N +++  C+ G  +EA  L + M + G  PN+  YNTL+      G  
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587

Query: 182 NRAEELFVSMESMGCKHNVFSYSILIN 208
             + EL   M S G   +  +  ++ N
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTN 614



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 4/235 (1%)

Query: 139 ELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +L +NG    K+D+A  L   M++    P+   ++ L+       + +    L   M+++
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G  HN ++YSILIN +C+  ++  AL++  +M+  G +P++V  ++L  G     ++  A
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L D+M   G   +T  + T I GL  +    EAV L   +     + D+  Y  +++G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNG 230

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LCK G   +A+ L   + +G L   V+ Y  +I  LC +  MD A +LF +ME K
Sbjct: 231 LCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETK 285



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  L+    EP ++TYN +I G+C+ G      +LF  ++      GV  KP+ V
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVV 537

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I G C++G  ++A  LF +MK++   PN   YN+LI       D   +  L  EM
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEA 149
              G   +  +  ++ N L  +G++D++
Sbjct: 598 RSCGFAGDASTIGLVTNML-HDGRLDKS 624


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 141/380 (37%), Positives = 220/380 (57%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +PN  TY T+++G+C+ G T+ ALNL  +M     E     KPN 
Sbjct: 194 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKM-----EEVSRIKPNV 248

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IIDGL K+G    A+ LF +M+++ I+PN+ TYN +I+GFC +  W+EA+ L  E
Sbjct: 249 VIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLRE 308

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ + P+VV+F+V++N L K GK  EA  L   M+  G+ PN   YN+++DGF    R
Sbjct: 309 MFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNR 368

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE +F  M + GC  +V ++SILI+GYC  K ++  + L  EM  +G+  + + Y T
Sbjct: 369 LDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTT 428

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++  +  A  L  EM   GV  +     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 429 LIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSK 488

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D++ YN LI GL   G+   A EL+  +P   L+ D +TYN +I  
Sbjct: 489 MDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDG 548

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F  M +K
Sbjct: 549 LCKQSRLDEATQMFDSMGSK 568



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 152/336 (45%), Gaps = 52/336 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PN  TYN++I+G  +      A  +F  MA         C P+ +
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKG------CSPDVI 389

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +IDG C    VD   +L  +M    +  N +TY +LIHGFC   + N A  L  EM
Sbjct: 390 TFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM 449

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKM----------------------------------- 146
           +  GV PNVV+ N +++ LC NGK+                                   
Sbjct: 450 ISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNI 509

Query: 147 -----------DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   YN+++DG C   R++ A ++F SM S G
Sbjct: 510 LICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG 569

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +V +++ LINGYCK   +   L ++ EM  +GI  + + Y TL  G  ++  +  A 
Sbjct: 570 FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGAL 629

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            +F EM   GV  DT   R  + GL     +  AV+
Sbjct: 630 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQ 665



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 163/344 (47%), Gaps = 40/344 (11%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  ++T +I   C    +  A   F K+     +P++VT+++L+HG C  +  +EA    
Sbjct: 110 NIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEA---- 165

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-- 176
           +    Q  +PNV++F  +MN LC+ G++ EA  LL+ M++ G++PN   Y T++DG C  
Sbjct: 166 LHFFHQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 225

Query: 177 ----------------------------------LTGRVNRAEELFVSMESMGCKHNVFS 202
                                               GR   A+ LF  M+  G   N+F+
Sbjct: 226 GDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFT 285

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ +ING+C +     A  L  EM  + + PDVV ++ L   L +  +   A +L++EM 
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEML 345

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G+  +T  Y + IDG  K   +  A  +F  +       D+  ++ LIDG C + R+ 
Sbjct: 346 PRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVD 405

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              +L   + R  L+A+ +TY  +IH  C  G ++ A DL  +M
Sbjct: 406 DGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM 449



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 151/296 (51%), Gaps = 9/296 (3%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D    L  KM+   I  N+ ++  LI  FC  +    A   F ++   G  P++V+F+ +
Sbjct: 93  DVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTL 152

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC   ++ EA   L    QI  +PN   + TLM+G C  GRV  A  L   M   G 
Sbjct: 153 LHGLCVEDRVSEA---LHFFHQI-CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGL 208

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           + N  +Y  +++G CK  +   AL+L  +M  +S+ IKP+VVIY+ +  GL++  +   A
Sbjct: 209 QPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDA 267

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             LF EMQ  G++ + + Y   I+G C +G   EA  L R +   K   D+  ++ LI+ 
Sbjct: 268 QNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINA 327

Query: 315 LCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L K G+   A EL+   LPRG+ I + +TYN MI       ++D A  +F  M  K
Sbjct: 328 LVKEGKFFEAEELYNEMLPRGI-IPNTITYNSMIDGFSKQNRLDAAERMFYLMATK 382



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 125/267 (46%), Gaps = 5/267 (1%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF      ++A  LF  M+     P V+ F  ++  + +  + D    L   M    
Sbjct: 47  LQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRR 106

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +  N + +  L+  FC   ++  A   F  +  +G   ++ ++S L++G C    +  AL
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEAL 166

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             + ++     KP+V+ + TL  GL    +V  A  L D M   G+  +   Y T +DG+
Sbjct: 167 HFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222

Query: 281 CKNGYIVEAVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A+ L R +  + + + ++  Y+ +IDGL K GR   A  LF  +    +  +
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           + TYN MI+  C+ G+  +A+ L  +M
Sbjct: 283 LFTYNCMINGFCSSGRWSEAQRLLREM 309



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 82/152 (53%), Gaps = 6/152 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  P+  TYN++I+GLC+      A  +F+ M  G+  F     P+ V
Sbjct: 522 EAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSM--GSKGF----SPDVV 575

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+TT+I+G CK G V    E+F +M    I  N +TY +LIHGFC   + N A  +F EM
Sbjct: 576 TFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEM 635

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           +  GV P+ ++   ++  L    ++  A + L
Sbjct: 636 ISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 107/225 (47%), Gaps = 5/225 (2%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A  L   M++    P    +  L+       R +    L   ME      N++S++I
Sbjct: 57  LDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTI 116

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI  +C   ++  ALS + ++   G  P +V ++TL  GL    +V  A   F ++ +  
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICKPN 176

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V     A+ T ++GLC+ G +VEAV L   +     + +   Y  ++DG+CK G    A 
Sbjct: 177 VI----AFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 326 ELFRSLPRGVLI-ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L R +     I  +VV Y+ +I  L  DG+   A++LF +M+ K
Sbjct: 233 NLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEK 277


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 212/366 (57%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+PN FTY  ++N +C++G+T  AL+L  +M +         KP+ V
Sbjct: 213 EAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRK------IKPHVV 266

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT IID LCK+G +D A   F +M+ + I  NV TYNSLI  FC    W++   L  +M
Sbjct: 267 TYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDM 326

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVV+F+ +++ L K GK+ EA  L   MI  G+ PN   YN+L+ G C   R+
Sbjct: 327 ITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRL 386

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M S GC  ++++Y+ILING+CK K+++  + L+ +M  +G+  D V Y+TL
Sbjct: 387 DEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTL 446

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  ++  A K+F EM   GV      Y   +DGLC NG + EA+ +   +   K 
Sbjct: 447 IQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKM 506

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           ELDI  YN +I G+C + ++  AW LF SLP   +  D+ +YNIM+  LC    + +A  
Sbjct: 507 ELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADA 566

Query: 362 LFLDME 367
           LF  M+
Sbjct: 567 LFRKMK 572



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 188/354 (53%), Gaps = 8/354 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P++ T NT++NGLC       A++L   M ANG       C+PN  TY  I++ +CK G 
Sbjct: 193 PDLITLNTIVNGLCLKDRVSEAVDLIARMMANG-------CQPNQFTYGPILNRMCKSGN 245

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
              A +L  KM+   I P+VVTY  +I   C     ++A   F EM  +G++ NV ++N 
Sbjct: 246 TASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNS 305

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++   C  G+ D+ ++LL  MI   + PN   ++ L+D     G++  A++L+  M + G
Sbjct: 306 LIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRG 365

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  +Y+ LI G C +K ++ A  +   M+SKG  PD+  YN L  G  +  QV+   
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGM 425

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +LF +M   G+ ADT  Y T I G C++  ++ A ++F+ +        I  Y  L+DGL
Sbjct: 426 RLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C +G L+ A  +   + +  +  D+  YNI+IH +C   K+D A  LF  + +K
Sbjct: 486 CDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSK 539



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 194/365 (53%), Gaps = 10/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++   G + NVFTYN+LI   C  G       L  +M            PN V
Sbjct: 283 DALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK------ITPNVV 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +ID L KEG + +AK+L+ +M    I PN +TYNSLI+G C     +EA  +   M
Sbjct: 337 TFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLM 396

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P++ ++N+++N  CK  ++D+  RL   M   G+  +   Y+TL+ GFC + ++
Sbjct: 397 VSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKL 456

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+++F  M S G    + +Y+IL++G C N E+E AL +  +M    ++ D+ IYN +
Sbjct: 457 IVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNII 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+   ++V+ A+ LF  +   GV  D  +Y   + GLCK   + EA  LFR ++   Y
Sbjct: 517 IHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGY 576

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E D   YN LI    +   +  + +L   + R    +D  T  I++  L + G++DK+  
Sbjct: 577 EPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML-SSGELDKS-- 633

Query: 362 LFLDM 366
            FL+M
Sbjct: 634 -FLNM 637



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL  ++ + G   +++T N +IN  CR      A +   ++      F +  +PNTVT+ 
Sbjct: 111 ALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKI------FKLGYEPNTVTFN 164

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+++GLC EG V +A EL   M      P+++T N++++G C  +  +EA  L   MM  
Sbjct: 165 TLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMAN 224

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN  ++  I+N +CK+G    A  LL  M    ++P+   Y  ++D  C  GR++ A
Sbjct: 225 GCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDA 284

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F  ME+ G K NVF+Y+ LI  +C     +    L  +M+++ I P+VV ++ L   
Sbjct: 285 LSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDS 344

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  ++  A  L++EM   G+  +T  Y + I GLC +  + EA ++   +     + D
Sbjct: 345 LVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPD 404

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  YN LI+G CK+ ++     LFR +    +IAD VTY+ +I   C   K+  A+ +F 
Sbjct: 405 IWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQ 464

Query: 365 DMEAK 369
           +M ++
Sbjct: 465 EMVSQ 469



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 156/312 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  +   L +    D    L  +M+ + I  ++ T N +I+ FC       A   
Sbjct: 88  PTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSA 147

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             ++   G +PN V+FN ++N LC  G++ EA  L++ M+     P+    NT+++G CL
Sbjct: 148 MGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCL 207

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             RV+ A +L   M + GC+ N F+Y  ++N  CK+     AL L  +M  + IKP VV 
Sbjct: 208 KDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVT 267

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  +   L +  +++ A   F EM+  G+ A+ + Y + I   C  G   +  +L R + 
Sbjct: 268 YTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMI 327

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K   ++  ++ LID L K G+L  A +L+  +    +  + +TYN +I+ LC D ++D
Sbjct: 328 TRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLD 387

Query: 358 KARDLFLDMEAK 369
           +A  +   M +K
Sbjct: 388 EANQMMDLMVSK 399



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 109/225 (48%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K D+A  L + M++    P    +N L      T + +    L   ME  G  +++++ +
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+ +++  A S   ++   G +P+ V +NTL  GL    +V  A +L D M   
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
               D     T ++GLC    + EAV+L   +     + +   Y  +++ +CKSG    A
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +L R +    +   VVTY I+I  LC DG++D A   F +ME K
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK 294


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  274 bits (700), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 141/366 (38%), Positives = 218/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++ TY  ++NGLC+ G   +AL+L ++M  G  E       + V
Sbjct: 203 EAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIE------ADVV 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIIDGLCK   +D A  LF KM+ + I P+V TYNSLI   C    W++A  L   M
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNM 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+F+ +++   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ +F  M S  C  NV +Y+ LI G+CK K +E  + L+ EM  +G+  + V YNTL
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+    + A K+F +M   GV  D   Y   +DGLCK G + +A+ +F  L+  K 
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E DI  YN +I+G+CK+G+++  W+LF SL    +  +V+ Y  MI   C  G  ++A  
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556

Query: 362 LFLDME 367
           LF +M+
Sbjct: 557 LFREMK 562



 Score =  238 bits (606), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 207/368 (56%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G +P+  T+NTLI+GL        A+ L ++M          C+P+ V
Sbjct: 168 DAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRG------CQPDLV 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G +D A  L  KM+   I  +VV YN++I G C     ++A  LF +M
Sbjct: 222 TYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKM 281

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+V ++N +++ LC  G+  +ASRLL  MI+  + PN   ++ L+D F   G++
Sbjct: 282 ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKL 341

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P+VV YNTL
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +VE   +LF EM + G+  +T  Y T I GL + G    A ++F+ +     
Sbjct: 402 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGV 461

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  Y+ L+DGLCK G+L+ A  +F  L +  +  D+ TYNIMI  +C  GK++   D
Sbjct: 462 PPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWD 521

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 522 LFCSLSLK 529



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 174/353 (49%), Gaps = 30/353 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           +A ALF K+   G  P+VFTYN+LI+ LC  G    A  L   M        VV      
Sbjct: 273 DAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALI 332

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    P+  TY+++I+G C    +D+AK +F  M  ++  
Sbjct: 333 DAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCF 392

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTYN+LI GFC A    E   LF EM  +G+  N V++N ++  L + G  D A ++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M+  GV P+   Y+ L+DG C  G++ +A  +F  ++    + ++++Y+I+I G CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++E    L+  +  KG+KP+V+IY T+  G       E A  LF EM+  G   D+  
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGC 572

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           Y T I    ++G    + EL + +R   +  D    + +I+ L   GRL+ ++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML-HDGRLEKSY 624



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 196/400 (49%), Gaps = 41/400 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++      P++  +N L++ + +     + ++L E M N    +      +  
Sbjct: 63  DAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISY------DLY 116

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I+  C+   +  A  +  KM      P++VT +SL++G+C++   ++A  L  +M
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 176

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P+ V+FN +++ L  + K  EA  L++ M+Q G +P+   Y  +++G C  G +
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDI 236

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   ME    + +V  Y+ +I+G CK K I+ A +L+++M +KGI+PDV  YN+L
Sbjct: 237 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296

Query: 242 -------------------------------FIGLFEIHQVE----RAFKLFDEMQRHGV 266
                                          F  L +    E     A KL+DEM +  +
Sbjct: 297 ISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D + Y + I+G C +  + EA  +F  +       ++  YN LI G CK+ R++   E
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LFR + +  L+ + VTYN +I  L   G  D A+ +F  M
Sbjct: 417 LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKM 456



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 155/290 (53%), Gaps = 10/290 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++FTY++LING C       A ++FE M + +      C PN 
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 395

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V++  ELF +M    +  N VTYN+LI G   A D + A+ +F +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++++++++++ LCK GK+++A  + E + +  + P+ + YN +++G C  G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF S+   G K NV  Y+ +I+G+C+    E A +L+ EM   G  PD   YNT
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 575

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
           L            + +L  EM+  G   D       I    DG  +  Y+
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 176/332 (53%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A+ LF EM            P+ V +  ++  + K    D    L  +M++  I+ ++ +
Sbjct: 64  AIGLFGEMVQSRP------LPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYS 117

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           YN LI+ FC  +    A  +  +MM  G +P++V+ + ++N  C + ++ +A  L++ M+
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 177

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P+   +NTL+ G  L  + + A  L   M   GC+ ++ +Y  ++NG CK  +I+
Sbjct: 178 EMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDID 237

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            ALSL  +M    I+ DVVIYNT+  GL +   ++ AF LF++M+  G+  D + Y + I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLI 297

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             LC  G   +A  L   +   K   ++  ++ LID   K G+L  A +L+  + +  + 
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            D+ TY+ +I+  C   ++D+A+ +F  M +K
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 134/255 (52%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V FN +++ + K  K D    L E M  + +  + + YN L
Sbjct: 62  DDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNIL 121

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + ++ + S L+NGYC +K I  A++L  +M+  G 
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 181

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KPD V +NTL  GLF  ++   A  L D+M + G   D   Y   ++GLCK G I  A+ 
Sbjct: 182 KPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALS 241

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E D+  YN +IDGLCK   +  A+ LF  +    +  DV TYN +I  LC
Sbjct: 242 LLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLC 301

Query: 352 ADGKMDKARDLFLDM 366
             G+   A  L  +M
Sbjct: 302 NYGRWSDASRLLSNM 316



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 151/291 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF +M      P++V +N L+        ++    L   M +  +  ++ S+N+
Sbjct: 61  LDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNI 120

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  +L  M+++G  P+    ++L++G+C + R++ A  L   M  MG
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K +  +++ LI+G   + +   A++L  +M+ +G +PD+V Y  +  GL +   ++ A 
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  +M++  + AD   Y T IDGLCK  +I +A  LF  +       D+  YN LI  L
Sbjct: 241 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCL 300

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L  ++    +  +VVT++ +I A   +GK+ +A  L+ +M
Sbjct: 301 CNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  273 bits (699), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 142/365 (38%), Positives = 215/365 (58%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G +PN  TY  ++N +C++G T +A+ L  +M   N       K + V
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 264

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ IIDGLCK+G +D A  LF +M+ +    +++TYN+LI GFC A  W++   L  +M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVV+F+V+++   K GK+ EA +LL+ M+Q G+ PN   YN+L+DGFC   R+
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M S GC  ++ +++ILINGYCK   I+  L L+ EM  +G+  + V YNTL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  ++E A KLF EM    V  D  +Y+  +DGLC NG + +A+E+F  +   K 
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           ELDI  Y  +I G+C + ++  AW+LF SLP   +  D   YNIMI  LC    + KA  
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564

Query: 362 LFLDM 366
           LF  M
Sbjct: 565 LFRKM 569



 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 202/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +P + T NTL+NGLC  G    A+ L + M     E G   +PN V
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV----ETGF--QPNEV 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++ +CK G    A EL  KM++ NI  + V Y+ +I G C     + A  LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G + +++++N ++   C  G+ D+ ++LL  MI+  + PN   ++ L+D F   G++
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++L   M   G   N  +Y+ LI+G+CK   +E A+ +   M+SKG  PD++ +N L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + ++++   +LF EM   GV A+T  Y T + G C++G +  A +LF+ +   + 
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI +Y  L+DGLC +G L+ A E+F  + +  +  D+  Y I+IH +C   K+D A D
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 530 LFCSLPLK 537



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL  ++   G   +++T + +IN  CR      A +   ++     E      P+TV + 
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE------PDTVIFN 162

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+++GLC E  V +A EL  +M +    P ++T N+L++G C     ++A  L   M++ 
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QPN V++  ++N +CK+G+   A  LL  M +  ++ +A  Y+ ++DG C  G ++ A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  ME  G K ++ +Y+ LI G+C     +    L  +M+ + I P+VV ++ L   
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  ++  A +L  EM + G+A +T  Y + IDG CK   + EA+++   +     + D
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  +N LI+G CK+ R+    ELFR +    +IA+ VTYN ++   C  GK++ A+ LF 
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462

Query: 365 DMEAK 369
           +M ++
Sbjct: 463 EMVSR 467



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 186/361 (51%), Gaps = 10/361 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF ++ + G + ++ TYNTLI G C  G       L  +M            PN VT++ 
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK------ISPNVVTFSV 338

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +ID   KEG + +A +L  +M    I PN +TYNSLI GFC  N   EA  +   M+ +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P++++FN+++N  CK  ++D+   L   M   GV  N   YNTL+ GFC +G++  A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +LF  M S   + ++ SY IL++G C N E+E AL ++ ++    ++ D+ IY  +  G+
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +V+ A+ LF  +   GV  D  AY   I  LC+   + +A  LFR +    +  D 
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN LI           A EL   +      ADV T  ++I+ L + G++DK+   FLD
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKS---FLD 634

Query: 366 M 366
           M
Sbjct: 635 M 635



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 147/290 (50%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A +LF  M      P V+ +N L         +     L  +M  +G+  ++ + +++
Sbjct: 70  DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  C+  K+  A   +  ++++G  P+  ++NTL++G CL  RV+ A EL   M  MG 
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K  + + + L+NG C N ++  A+ L   M+  G +P+ V Y  +   + +  Q   A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M+   +  D   Y   IDGLCK+G +  A  LF  + I  ++ DI  YN LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +GR     +L R + +  +  +VVT++++I +   +GK+ +A  L  +M
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  PN  TYN+LI+G C+      A+ + + M +        C P+ +
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG------CDPDIM 404

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+G CK   +D   ELF +M    +  N VTYN+L+ GFC +     AK LF EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V+P++VS+ ++++ LC NG++++A  +   + +  +  +  +Y  ++ G C   +V
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +LF S+   G K +  +Y+I+I+  C+   +  A  L+ +M  +G  PD + YN L
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
                       A +L +EM+  G  AD    +  I+ L         +++  T R
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 115/225 (51%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K D+A  L   MIQ    P    +N L      T +      L   MES G  H++++ S
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+ +++  A S   +++  G +PD VI+NTL  GL    +V  A +L D M   
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G         T ++GLC NG + +AV L   +    ++ +   Y  +++ +CKSG+  +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            EL R +    +  D V Y+I+I  LC DG +D A +LF +ME K
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  273 bits (698), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 137/380 (36%), Positives = 220/380 (57%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +P   TY T+++G+C+ G T+ ALNL  +M   +        PN 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M+++ I P++ TYNS+I GFC +  W++A+ L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV++N ++N   K GK  EA+ L + M+  G+ PN   YN+++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDR 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE++F  M + GC  +VF+++ LI+GYC  K I+  + L  EM  +G+  + V YNT
Sbjct: 376 LDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   +  +  A  L  +M   GV  D     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 436 LIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 495

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D+  YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 MDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F+ M +K
Sbjct: 556 LCKQSRLDEATQMFVSMGSK 575



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 183/386 (47%), Gaps = 42/386 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +  L+  + R     + ++L+++M        + C  +  ++  +I   C    +
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIYSFNILIKCFCSCSKL 130

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+    ++P+VVT+ +L+HG C  +  +EA   F +M +   +PNVV+F  +
Sbjct: 131 PFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTL 190

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG---------------------- 174
           MN LC+ G++ EA  LL+ M++ G++P    Y T++DG                      
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 175 --------------FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                          C  GR + A+ LF  M+  G   ++F+Y+ +I G+C +     A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I PDVV YN L     +  +   A +L+DEM   G+  +T  Y + IDG 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGF 370

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A ++F  +       D+  +  LIDG C + R+    EL   +PR  L+A+ 
Sbjct: 371 CKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANT 430

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           VTYN +IH  C  G ++ A DL   M
Sbjct: 431 VTYNTLIHGFCLVGDLNAALDLSQQM 456



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 165/350 (47%), Gaps = 53/350 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L+ ++   G  PN  TYN++I+G C+      A ++F  MA         C P+  
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKG------CSPDVF 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+TT+IDG C    +D   EL  +M    +  N VTYN+LIHGFC   D N A  L  +M
Sbjct: 397 TFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQM 456

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  GV P++V+ N +++ LC NGK+                                   
Sbjct: 457 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNI 516

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   Y++++DG C   R++ A ++FVSM S  
Sbjct: 517 LICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI  D +IY TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-LKYELD 304
            +F EM   GV  DT   R  + G      +  AV +   L++ + Y+L+
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGYQLE 686



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 1/267 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF       +A  LF +M+     P+VV F  +M  + +  + D    L + M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +R + + +N L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             + +M     +P+VV + TL  GL    ++  A  L D M   G+      Y T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 281 CKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A+ L R +  + + + ++  Y+ +ID LCK GR   A  LF  +    +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           + TYN MI   C+ G+   A  L  +M
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM 316



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L  GF     +  A +LF  M       +V  +  L+    + +  +  +SLY +M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I+ D+  +N L        ++  A   F ++ + G+  D   + T + GLC    + EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           + F  +       ++  +  L++GLC+ GR+  A  L   +    L    +TY  ++  +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 351 CADGKMDKARDLFLDME 367
           C  G    A +L   ME
Sbjct: 230 CKKGDTVSALNLLRKME 246


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 144/366 (39%), Positives = 214/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     K+   G   N   Y TLINGLC+ G T  AL L   +       G + +PN V
Sbjct: 144 QALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVD------GKLVQPNVV 197

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID +CK   V++A +L+ +M  + I+P+VVTY++LI GFC     N+A  LF +M
Sbjct: 198 MYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKM 257

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+V +F+++++  CK G++ EA  +L +M++ G++P+   Y +LMDG+CL  +V
Sbjct: 258 ISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQV 317

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A+ +F +M   G   NV SY+I+ING+CK K+++ A++L+ EM  K I PDVV YN+L
Sbjct: 318 NKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++  A KL DEM   GV  D   Y + +D LCKN  + +A+ L   ++    
Sbjct: 378 IDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGI 437

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y  LIDGLCK GRLK A  +F  L        V TY +MI   C +   DKA  
Sbjct: 438 QPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALA 497

Query: 362 LFLDME 367
           L   ME
Sbjct: 498 LLSKME 503



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 201/365 (55%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++   G   ++ T+N LIN   + GHT  + ++F  +     E      PN +T
Sbjct: 75  AISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYE------PNAIT 128

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            TT+I GLC +G + +A     K+     + N V Y +LI+G C     + A  L   + 
Sbjct: 129 LTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVD 188

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + VQPNVV +N I++ +CK   ++EA  L   M+  G+ P+   Y+ L+ GFC+ G++N
Sbjct: 189 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLN 248

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  M S     +V+++SIL++G+CK   ++ A ++ + M+ +GIKPDVV Y +L 
Sbjct: 249 DAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLM 308

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + QV +A  +F+ M + GV A+  +Y   I+G CK   + EA+ LF+ +      
Sbjct: 309 DGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNII 368

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  YN LIDGLCKSG++  A +L   +    +  D +TYN ++ ALC + ++DKA  L
Sbjct: 369 PDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIAL 428

Query: 363 FLDME 367
              M+
Sbjct: 429 LTKMK 433



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 194/369 (52%), Gaps = 8/369 (2%)

Query: 3   AAALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +AAL +  RV G   +PNV  YNT+I+ +C+      A +L+ EM +          P+ 
Sbjct: 178 SAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG------ISPDV 231

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +I G C  G ++ A  LF KM  E INP+V T++ L+ GFC      EAK +   
Sbjct: 232 VTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAM 291

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM QG++P+VV++  +M+  C   ++++A  +   M Q GV  N   YN +++GFC   +
Sbjct: 292 MMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKK 351

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  LF  M       +V +Y+ LI+G CK+ +I  AL L  EM  +G+  D + YN+
Sbjct: 352 VDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNS 411

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L + HQV++A  L  +M+  G+  D + Y   IDGLCK G + +A  +F  L +  
Sbjct: 412 ILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKG 471

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y + +  Y  +I G C +     A  L   +     I +  TY I+I +L    + D A 
Sbjct: 472 YNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAE 531

Query: 361 DLFLDMEAK 369
            L  +M A+
Sbjct: 532 KLLREMIAR 540



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/336 (31%), Positives = 179/336 (53%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  P+V TY+ LI+G C  G    A+ LF +M +          P+  
Sbjct: 214 EAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEE------INPDVY 267

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ ++DG CKEG V +AK +   M  + I P+VVTY SL+ G+C     N+AK +F  M
Sbjct: 268 TFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTM 327

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  NV S+N+++N  CK  K+DEA  L + M    + P+   YN+L+DG C +G++
Sbjct: 328 AQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKI 387

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G  H+  +Y+ +++  CKN +++ A++L ++M  +GI+PD+  Y  L
Sbjct: 388 SYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTIL 447

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A  +F+++   G     + Y   I G C N    +A+ L   +     
Sbjct: 448 IDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGC 507

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             + + Y  +I  L +     +A +L R +  RG+L
Sbjct: 508 IPNAKTYEIIILSLFEKDENDMAEKLLREMIARGLL 543



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 161/312 (51%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P    +  I+  L K      A  L  +M+   I  ++VT+N LI+ F      + +  +
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G +PN ++   ++  LC  G++ +A    + ++ +G   N   Y TL++G C 
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+ + A +L   ++    + NV  Y+ +I+  CK K +  A  LYSEM+SKGI PDVV 
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+ L  G   + ++  A  LF++M    +  D + +   +DG CK G + EA  +   + 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+  Y  L+DG C   ++  A  +F ++ +G + A+V +YNIMI+  C   K+D
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 358 KARDLFLDMEAK 369
           +A +LF +M  K
Sbjct: 354 EAMNLFKEMHCK 365



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 2/277 (0%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCL--FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           NP  +   SL     + +  +E   +  F  +++    P +  F  I+  L K      A
Sbjct: 16  NPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTA 75

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             L   M   G+  +   +N L++ F   G  + +  +F ++   G + N  + + LI G
Sbjct: 76  ISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKG 135

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C   +I  AL  + ++++ G   + V Y TL  GL ++ Q   A +L   +    V  +
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 195

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y T ID +CK   + EA +L+  +       D+  Y+ LI G C  G+L  A  LF 
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +    +  DV T++I++   C +G++ +A+++   M
Sbjct: 256 KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMM 292


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA AL  ++   GC+P++ TY  ++NGLC+ G T +A NL  +M  G  E      P  +
Sbjct: 818  EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVL 871

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             Y TIIDGLCK   +D A  LF +M+ + I PNVVTY+SLI   C    W++A  L  +M
Sbjct: 872  IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 931

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +++ + P+V +F+ +++   K GK+ EA +L + M++  + P+   Y++L++GFC+  R+
Sbjct: 932  IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 991

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            + A+++F  M S  C  +V +Y+ LI G+CK K +E  + ++ EM  +G+  + V YN L
Sbjct: 992  DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 1051

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              GLF+    + A ++F EM   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 1052 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 1111

Query: 302  ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            E  I  YN +I+G+CK+G+++  W+LF +L    +  DVV YN MI   C  G  ++A  
Sbjct: 1112 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 1171

Query: 362  LFLDME 367
            LF +M+
Sbjct: 1172 LFKEMK 1177



 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 218/367 (59%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T  +L+NG CR      A++L ++M     E G   KP+ V 
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVA 295

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  IID LCK   V+ A + F +++ + I PNVVTY +L++G C ++ W++A  L  +M+
Sbjct: 296 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 355

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV++++ +++   KNGK+ EA  L E M+++ + P+   Y++L++G CL  R++
Sbjct: 356 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 415

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F  M S GC  +V SY+ LING+CK K +E  + L+ EM  +G+  + V YNTL 
Sbjct: 416 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 475

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V++A + F +M   G++ D W Y   + GLC NG + +A+ +F  ++  + +
Sbjct: 476 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 535

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LDI  Y  +I G+CK+G+++ AW LF SL    L  D+VTY  M+  LC  G + +   L
Sbjct: 536 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 595

Query: 363 FLDMEAK 369
           +  M+ +
Sbjct: 596 YTKMKQE 602



 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/369 (36%), Positives = 209/369 (56%), Gaps = 8/369 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
            EA AL  ++ V G +PN  T+NTLI+GL        A+ L + M A G       C+P+ 
Sbjct: 783  EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-------CQPDL 835

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            VTY  +++GLCK G  D A  L  KM+   + P V+ YN++I G C     ++A  LF E
Sbjct: 836  VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 895

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M  +G++PNVV+++ +++ LC  G+  +ASRLL  MI+  + P+ F ++ L+D F   G+
Sbjct: 896  METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 955

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +  AE+L+  M       ++ +YS LING+C +  ++ A  ++  M+SK   PDVV YNT
Sbjct: 956  LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 1015

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
            L  G  +  +VE   ++F EM + G+  +T  Y   I GL + G    A E+F+ +    
Sbjct: 1016 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 1075

Query: 301  YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
               +I  YN L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK++   
Sbjct: 1076 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 1135

Query: 361  DLFLDMEAK 369
            DLF ++  K
Sbjct: 1136 DLFCNLSLK 1144



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/341 (32%), Positives = 184/341 (53%), Gaps = 6/341 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  K+   G +P++  YN +I+ LC+T     A + F+E+           +PN V
Sbjct: 276 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------IRPNVV 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++GLC       A  L   M  + I PNV+TY++L+  F       EAK LF EM
Sbjct: 330 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P++V+++ ++N LC + ++DEA+++ +LM+  G   +   YNTL++GFC   RV
Sbjct: 390 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M   G   N  +Y+ LI G+ +  +++ A   +S+M   GI PD+  YN L
Sbjct: 450 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E+A  +F++MQ+  +  D   Y T I G+CK G + EA  LF +L +   
Sbjct: 510 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 569

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           + DI  Y  ++ GLC  G L     L+  + +  L+ +  T
Sbjct: 570 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 610



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 47/403 (11%)

Query: 2    EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
            +A ALF   +K R F   P++  ++ L++ + +     V ++L E+M N     G+    
Sbjct: 678  DAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI--PH 728

Query: 59   NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            N  TY+ +I+  C+   +  A  +  KM      PN+VT +SL++G+C++   +EA  L 
Sbjct: 729  NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 788

Query: 119  IEMMDQGVQPNVVSFN-----------------------------------VIMNELCKN 143
             +M   G QPN V+FN                                   V++N LCK 
Sbjct: 789  DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 848

Query: 144  GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
            G  D A  LL  M Q  + P   +YNT++DG C    ++ A  LF  ME+ G + NV +Y
Sbjct: 849  GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 908

Query: 204  SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
            S LI+  C       A  L S+M+ + I PDV  ++ L     +  ++  A KL+DEM +
Sbjct: 909  SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 968

Query: 264  HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
              +      Y + I+G C +  + EA ++F  +       D+  YN LI G CK  R++ 
Sbjct: 969  RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 1028

Query: 324  AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              E+FR + +  L+ + VTYNI+I  L   G  D A+++F +M
Sbjct: 1029 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 1071



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 176/330 (53%), Gaps = 6/330 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF +M      F     P+ V +  ++  + K    D    L  KM+   I  ++ T
Sbjct: 172 AIDLFSDMVKSR-PF-----PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 225

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N +I+ FC     + A  +  +M+  G +P+ V+   ++N  C+  ++ +A  L++ M+
Sbjct: 226 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 285

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +IG +P+   YN ++D  C T RVN A + F  +E  G + NV +Y+ L+NG C +    
Sbjct: 286 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 345

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L S+M+ K I P+V+ Y+ L     +  +V  A +LF+EM R  +  D   Y + I
Sbjct: 346 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 405

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC +  I EA ++F  +       D+ +YN LI+G CK+ R++   +LFR + +  L+
Sbjct: 406 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ++ VTYN +I      G +DKA++ F  M+
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 495



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/446 (27%), Positives = 192/446 (43%), Gaps = 81/446 (18%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           +A   F ++  FG  P+++TYN L+ GLC  G    AL +FE+M     +  +V      
Sbjct: 486 KAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVI 545

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                   KP+ VTYTT++ GLC +G + + + L+ KMK E + 
Sbjct: 546 RGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLM 605

Query: 93  PNVVTYN------------------------------------SLIHGFCYANDWN---- 112
            N  T +                                    SL+  F     ++    
Sbjct: 606 KNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREK 665

Query: 113 ------------EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
                       +A  LF EM+     P+++ F+ +++ + K  K D    L E M  +G
Sbjct: 666 LSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG 725

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +  N + Y+ L++ FC   ++  A  +   M  +G + N+ + S L+NGYC +K I  A+
Sbjct: 726 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 785

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L  +M   G +P+ V +NTL  GLF  ++   A  L D M   G   D   Y   ++GL
Sbjct: 786 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 845

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G    A  L   +   K E  +  YN +IDGLCK   +  A  LF+ +    +  +V
Sbjct: 846 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 905

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           VTY+ +I  LC  G+   A  L  DM
Sbjct: 906 VTYSSLISCLCNYGRWSDASRLLSDM 931



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 148/270 (54%), Gaps = 6/270 (2%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  L+ ++     +P++ TY++LING C       A  +FE M + +      C P+ 
Sbjct: 957  VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 1010

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            VTY T+I G CK   V++  E+F +M    +  N VTYN LI G   A D + A+ +F E
Sbjct: 1011 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 1070

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+  GV PN++++N +++ LCKNGK+++A  + E + +  + P  + YN +++G C  G+
Sbjct: 1071 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 1130

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            V    +LF ++   G K +V +Y+ +I+G+C+    E A +L+ EM   G  P+   YNT
Sbjct: 1131 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 1190

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            L          E + +L  EM+  G A D 
Sbjct: 1191 LIRARLRDGDREASAELIKEMRSCGFAGDA 1220



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 151/294 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A +LF  M      P++V +N L+        ++    L  +M   G++ ++ +FN+
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  M+++G  P+     +L++GFC   RV+ A  L   M  +G
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K ++ +Y+ +I+  CK K +  A   + E+  KGI+P+VV Y  L  GL    +   A 
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M +  +  +   Y   +D   KNG ++EA ELF  +  +  + DI  Y+ LI+GL
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 408

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C   R+  A ++F  +     +ADVV+YN +I+  C   +++    LF +M  +
Sbjct: 409 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 462



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/411 (24%), Positives = 193/411 (46%), Gaps = 46/411 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG--HTIVAL--NLFEE--------MANGN 49
           EA +LF  L + G +P++ TY T+++GLC  G  H + AL   + +E        +++G+
Sbjct: 556 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGD 615

Query: 50  GEFG-------VVCKPNTVTYTTIIDGLCKEGF--------------------------- 75
                      + C         I  G+CK+                             
Sbjct: 616 ITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELK 675

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF +M      P+++ ++ L+      N ++    L  +M + G+  N  ++++
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  +L  M+++G  PN    ++L++G+C + R++ A  L   M   G
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  +++ LI+G   + +   A++L   M++KG +PD+V Y  +  GL +    + AF
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M++  +      Y T IDGLCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  DV T++ +I A   +GK+ +A  L+ +M
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 966



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++     +P++ TY++LINGLC       A  +F+ M +        C  + 
Sbjct: 380 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CLADV 433

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+I+G CK   V+   +LF +M    +  N VTYN+LI GF  A D ++A+  F +
Sbjct: 434 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 493

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P++ ++N+++  LC NG++++A  + E M +  +  +   Y T++ G C TG+
Sbjct: 494 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 553

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           V  A  LF S+   G K ++ +Y+ +++G C    +    +LY++M  +G+
Sbjct: 554 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 604



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            E   +F ++   G   N  TYN LI GL + G   +A  +F+EM +     GV   PN +
Sbjct: 1028 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD----GV--PPNIM 1081

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY T++DGLCK G ++KA  +F  ++   + P + TYN +I G C A    +   LF  +
Sbjct: 1082 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 1141

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              +GV+P+VV++N +++  C+ G  +EA  L + M + G  PN+  YNTL+      G  
Sbjct: 1142 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 1201

Query: 182  NRAEELFVSMESMGCKHNVFSYSILIN 208
              + EL   M S G   +  +  ++ N
Sbjct: 1202 EASAELIKEMRSCGFAGDASTIGLVTN 1228



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 114/222 (51%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+++A  L   M++    P+   +N L+       + +    L   ME +G ++++++++
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C   ++  ALS+  +ML  G +PD V   +L  G    ++V  A  L D+M   
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D  AY   ID LCK   + +A + F+ +       ++  Y  L++GLC S R   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             L   + +  +  +V+TY+ ++ A   +GK+ +A++LF +M
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 389



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 94/190 (49%)

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+ D+  +N
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +        QV  A  +  +M + G   D     + ++G C+   + +AV L   +  +
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            Y+ DI AYN +ID LCK+ R+  A++ F+ + R  +  +VVTY  +++ LC   +   A
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 360 RDLFLDMEAK 369
             L  DM  K
Sbjct: 348 ARLLSDMIKK 357



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  +F  L+    EP ++TYN +I G+C+ G      +LF  ++      GV  KP+ V
Sbjct: 1098 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVV 1151

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             Y T+I G C++G  ++A  LF +MK++   PN   YN+LI       D   +  L  EM
Sbjct: 1152 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 1211

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEA 149
               G   +  +  ++ N L  +G++D++
Sbjct: 1212 RSCGFAGDASTIGLVTNML-HDGRLDKS 1238


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++ TY  ++NGLC+ G T +A NL  +M  G  E      P  +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVL 257

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIIDGLCK   +D A  LF +M+ + I PNVVTY+SLI   C    W++A  L  +M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+V +F+ +++   K GK+ EA +L + M++  + P+   Y++L++GFC+  R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+++F  M S  C  +V +Y+ LI G+CK K +E  + ++ EM  +G+  + V YN L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+    + A ++F EM   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E  I  YN +I+G+CK+G+++  W+LF +L    +  DVV YN MI   C  G  ++A  
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557

Query: 362 LFLDME 367
           LF +M+
Sbjct: 558 LFKEMK 563



 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/369 (36%), Positives = 209/369 (56%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA AL  ++ V G +PN  T+NTLI+GL        A+ L + M A G       C+P+ 
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-------CQPDL 221

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +++GLCK G  D A  L  KM+   + P V+ YN++I G C     ++A  LF E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PNVV+++ +++ LC  G+  +ASRLL  MI+  + P+ F ++ L+D F   G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  AE+L+  M       ++ +YS LING+C +  ++ A  ++  M+SK   PDVV YNT
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +VE   ++F EM + G+  +T  Y   I GL + G    A E+F+ +    
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +I  YN L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK++   
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521

Query: 361 DLFLDMEAK 369
           DLF ++  K
Sbjct: 522 DLFCNLSLK 530



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 47/403 (11%)

Query: 2   EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A ALF   +K R F   P++  ++ L++ + +     V ++L E+M N     G+    
Sbjct: 64  DAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI--PH 114

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  TY+ +I+  C+   +  A  +  KM      PN+VT +SL++G+C++   +EA  L 
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174

Query: 119 IEMMDQGVQPNVVSFN-----------------------------------VIMNELCKN 143
            +M   G QPN V+FN                                   V++N LCK 
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           G  D A  LL  M Q  + P   +YNT++DG C    ++ A  LF  ME+ G + NV +Y
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S LI+  C       A  L S+M+ + I PDV  ++ L     +  ++  A KL+DEM +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
             +      Y + I+G C +  + EA ++F  +       D+  YN LI G CK  R++ 
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             E+FR + +  L+ + VTYNI+I  L   G  D A+++F +M
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 148/270 (54%), Gaps = 6/270 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++ TY++LING C       A  +FE M + +      C P+ 
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 396

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V++  E+F +M    +  N VTYN LI G   A D + A+ +F E
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++++N +++ LCKNGK+++A  + E + +  + P  + YN +++G C  G+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF ++   G K +V +Y+ +I+G+C+    E A +L+ EM   G  P+   YNT
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           L          E + +L  EM+  G A D 
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDA 606



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 129/255 (50%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P+++ F+ +++ + K  K D    L E M  +G+  N + Y+ L
Sbjct: 63  DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   ++  A  +   M  +G + N+ + S L+NGYC +K I  A++L  +M   G 
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P+ V +NTL  GLF  ++   A  L D M   G   D   Y   ++GLCK G    A  
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +   K E  +  YN +IDGLCK   +  A  LF+ +    +  +VVTY+ +I  LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302

Query: 352 ADGKMDKARDLFLDM 366
             G+   A  L  DM
Sbjct: 303 NYGRWSDASRLLSDM 317



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 151/291 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF +M      P+++ ++ L+      N ++    L  +M + G+  N  ++++
Sbjct: 62  LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  +L  M+++G  PN    ++L++G+C + R++ A  L   M   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  +++ LI+G   + +   A++L   M++KG +PD+V Y  +  GL +    + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M++  +      Y T IDGLCK  ++ +A+ LF+ +       ++  Y+ LI  L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  DV T++ +I A   +GK+ +A  L+ +M
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 6/207 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   +F ++   G   N  TYN LI GL + G   +A  +F+EM +     GV   PN +
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD----GV--PPNIM 467

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++DGLCK G ++KA  +F  ++   + P + TYN +I G C A    +   LF  +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+P+VV++N +++  C+ G  +EA  L + M + G  PN+  YNTL+      G  
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587

Query: 182 NRAEELFVSMESMGCKHNVFSYSILIN 208
             + EL   M S G   +  +  ++ N
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTN 614



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 4/235 (1%)

Query: 139 ELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +L +NG    K+D+A  L   M++    P+   ++ L+       + +    L   M+++
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G  HN ++YSILIN +C+  ++  AL++  +M+  G +P++V  ++L  G     ++  A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L D+M   G   +T  + T I GL  +    EA+ L   +     + D+  Y  +++G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LCK G   +A+ L   + +G L   V+ YN +I  LC    MD A +LF +ME K
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 7/148 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  L+    EP ++TYN +I G+C+ G      +LF  ++      GV  KP+ V
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVV 537

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I G C++G  ++A  LF +MK++   PN   YN+LI       D   +  L  EM
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEA 149
              G   +  +  ++ N L  +G++D++
Sbjct: 598 RSCGFAGDASTIGLVTNML-HDGRLDKS 624


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 218/366 (59%), Gaps = 9/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++ TY T++NGLC+ G   +ALNL  +M           K N V
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVV 259

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + TIID LCK   V+ A +LF +M+ + I PNVVTYNSLI+  C    W++A  L   M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+FN +++   K GK+ EA +L E MIQ  + P+   YN L++GFC+  R+
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+++F  M S  C  N+ +Y+ LING+CK K +E  + L+ EM  +G+  + V Y T+
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+    + A  +F +M  + V  D   Y   + GLC  G +  A+ +F+ L+  + 
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           EL+I  YN +I+G+CK+G++  AW+LF SL    +  DVVTYN MI  LC+   + +A D
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADD 556

Query: 362 LFLDME 367
           LF  M+
Sbjct: 557 LFRKMK 562



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 191/371 (51%), Gaps = 12/371 (3%)

Query: 2   EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A  LF   +K R F   P++  +N L++ + +     + ++L E+M       G+    
Sbjct: 66  DAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI--SH 116

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  TY+  I+  C+   +  A  +  KM      P++VT +SL++G+C++   ++A  L 
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M++ G +P+  +F  +++ L  + K  EA  L++ M+Q G +P+   Y T+++G C  
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++ A  L   ME+   K NV  ++ +I+  CK + +E A+ L++EM +KGI+P+VV Y
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L   L    +   A +L   M    +  +   +   ID   K G +VEA +L   +  
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D   YN LI+G C   RL  A ++F+ +     + ++ TYN +I+  C   +++ 
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416

Query: 359 ARDLFLDMEAK 369
             +LF +M  +
Sbjct: 417 GVELFREMSQR 427



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 140/269 (52%), Gaps = 9/269 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  ++     +P+  TYN LING C       A  +F+ M + +      C PN 
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD------CLPNI 398

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T+I+G CK   V+   ELF +M    +  N VTY ++I GF  A D + A+ +F +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   V  ++++++++++ LC  GK+D A  + + + +  +  N F+YNT+++G C  G+
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A +LF    S+  K +V +Y+ +I+G C  + ++ A  L+ +M   G  P+   YNT
Sbjct: 519 VGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L            + +L  EM+  G   D
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGD 604



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 153/291 (52%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A +LF  M      P++V +N L+      N +     L  +M   G+  ++ ++++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
            +N  C+  ++  A  +L  M+++G  P+    ++L++G+C + R++ A  L   M  MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K + F+++ LI+G   + +   A++L  +M+ +G +PD+V Y T+  GL +   ++ A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M+   + A+   + T ID LCK  ++  AV+LF  +       ++  YN LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L  ++    +  +VVT+N +I A   +GK+ +A  L  +M
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 137/258 (53%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF +M+     P++V FN +++ + K  K +    L E M  +G+  + + Y+  
Sbjct: 65  DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +++ A  +   M  +G + ++ + S L+NGYC +K I  A++L  +M+  G 
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KPD   + TL  GLF  ++   A  L D+M + G   D   Y T ++GLCK G I  A+ 
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +   + + ++  +N +ID LCK   +++A +LF  +    +  +VVTYN +I+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304

Query: 352 ADGKMDKARDLFLDMEAK 369
             G+   A  L  +M  K
Sbjct: 305 NYGRWSDASRLLSNMLEK 322



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 16/293 (5%)

Query: 79  AKELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           AK LF+    + I   P V ++ +L    C+   +  A   + E              ++
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
            N L    K+D+A  L   M++    P+   +N L+       +      L   M+++G 
Sbjct: 55  RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
            H++++YSI IN +C+  ++  AL++ ++M+  G +PD+V  ++L  G     ++  A  
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D+M   G   DT+ + T I GL  +    EAV L   +     + D+  Y  +++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G + +A  L   +    + A+VV +N +I +LC    ++ A DLF +ME K
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 10/147 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  L+    E N+F YNT+I G+C+ G    A +LF  ++          KP+ VT
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVT 537

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I GLC +  + +A +LF KMK++   PN  TYN+LI       D   +  L  EM 
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEA 149
             G   +  + +++ N L  +G++D++
Sbjct: 598 SSGFVGDASTISLVTNML-HDGRLDKS 623


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 217/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++ V GC+P++ TY  ++NGLC+ G   +AL+L ++M  G  E      P  V
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE------PGVV 257

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LC    V+ A  LF +M ++ I PNVVTYNSLI   C    W++A  L  +M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+F+ +++   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ +F  M S  C  NV +Y+ LI G+CK K ++  + L+ EM  +G+  + V Y TL
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+  + + A  +F +M   GV  D   Y   +DGLC NG +  A+ +F  L+  K 
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E DI  YN +I+G+CK+G+++  W+LF SL    +  +VVTY  M+   C  G  ++A  
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557

Query: 362 LFLDME 367
           LF +M+
Sbjct: 558 LFREMK 563



 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 134/373 (35%), Positives = 207/373 (55%), Gaps = 16/373 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  ++   G +P+ FT+NTLI+GL R      A+ L + M          C+P+ V
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG------CQPDLV 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G +D A  L  KM+   I P VV YN++I   C   + N+A  LF EM
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++PNVV++N ++  LC  G+  +ASRLL  MI+  + PN   ++ L+D F   G++
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P+VV YNTL
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL-----CKNGYIVEAVELFRTL 296
             G  +  +V+   +LF EM + G+  +T  Y T I G      C N  IV     F+ +
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV-----FKQM 457

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  DI  Y+ L+DGLC +G+++ A  +F  L R  +  D+ TYNIMI  +C  GK+
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517

Query: 357 DKARDLFLDMEAK 369
           +   DLF  +  K
Sbjct: 518 EDGWDLFCSLSLK 530



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 183/353 (51%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  ++ L++ + +     + ++L E+M N     G+    N  TY+ +I+  C+   +
Sbjct: 79  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SHNLYTYSILINCFCRRSQL 132

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  +  KM      P++VT NSL++GFC+ N  ++A  L  +M++ G QP+  +FN +
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L ++ +  EA  L++ M+  G +P+   Y  +++G C  G ++ A  L   ME    
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           +  V  Y+ +I+  C  K +  AL+L++EM +KGI+P+VV YN+L   L    +   A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M    +  +   +   ID   K G +VEA +L+  +     + DI  Y+ LI+G C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              RL  A  +F  +       +VVTYN +I   C   ++D+  +LF +M  +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/309 (31%), Positives = 161/309 (52%), Gaps = 7/309 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T++ LI+   + G  + A  L++EM   +        P+  TY+++I+G C    +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIFTYSSLINGFCMHDRL 377

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+AK +F  M  ++  PNVVTYN+LI GFC A   +E   LF EM  +G+  N V++  +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++   +  + D A  + + M+  GV P+   Y+ L+DG C  G+V  A  +F  ++    
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + ++++Y+I+I G CK  ++E    L+  +  KG+KP+VV Y T+  G       E A  
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM+  G   D+  Y T I    ++G    + EL R +R  ++  D      L+  + 
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNML 616

Query: 317 KSGRLKIAW 325
             GRL  ++
Sbjct: 617 HDGRLDKSF 625



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 149/262 (56%), Gaps = 6/262 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++FTY++LING C       A ++FE M + +      C PN 
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 396

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   VD+  ELF +M    +  N VTY +LIHGF  A + + A+ +F +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++++++++++ LC NGK++ A  + E + +  + P+ + YN +++G C  G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF S+   G K NV +Y+ +++G+C+    E A +L+ EM  +G  PD   YNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576

Query: 241 LFIGLFEIHQVERAFKLFDEMQ 262
           L            + +L  EM+
Sbjct: 577 LIRAHLRDGDKAASAELIREMR 598



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/255 (30%), Positives = 128/255 (50%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF +M+     P++V F+ +++ + K  K D    L E M  +G+  N + Y+ L
Sbjct: 63  DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +++ A  +   M  +G + ++ + + L+NG+C    I  A+SL  +M+  G 
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +PD   +NTL  GLF  ++   A  L D M   G   D   Y   ++GLCK G I  A+ 
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L + +   K E  +  YN +ID LC    +  A  LF  +    +  +VVTYN +I  LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302

Query: 352 ADGKMDKARDLFLDM 366
             G+   A  L  DM
Sbjct: 303 NYGRWSDASRLLSDM 317



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 147/291 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF  M      P++V ++ L+      N ++    L  +M + G+  N+ ++++
Sbjct: 62  LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  +L  M+++G  P+    N+L++GFC   R++ A  L   M  MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + + F+++ LI+G  ++     A++L   M+ KG +PD+V Y  +  GL +   ++ A 
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  +M++  +      Y T ID LC    + +A+ LF  +       ++  YN LI  L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  +VVT++ +I A   +GK+ +A  L+ +M
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 121/225 (53%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+D+A  L   M++    P+   ++ L+       + +    L   M+++G  HN+++YS
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN +C+  ++  AL++ ++M+  G +PD+V  N+L  G    +++  A  L  +M   
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D++ + T I GL ++    EAV L   + +   + D+  Y  +++GLCK G + +A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L + + +G +   VV YN +I ALC    ++ A +LF +M+ K
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  272 bits (695), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 216/380 (56%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +P   TY T+++G+C+ G T+ ALNL  +M   +        PN 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M+++ I P++ TYNS+I GFC +  W++A+ L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV++N ++N   K GK  EA  L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+  D   YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D++ YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F  M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 183/386 (47%), Gaps = 42/386 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +  L+  + R     + ++L+++M        + C  +  ++T +I   C    +
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIYSFTILIKCFCSCSKL 130

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+    ++P+VVT+N+L+HG C  +  +EA  LF +M +   +PNVV+F  +
Sbjct: 131 PFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL 190

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG---------------------- 174
           MN LC+ G++ EA  LL+ M++ G++P    Y T++DG                      
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 175 --------------FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                          C  GR + A+ LF  M+  G   ++F+Y+ +I G+C +     A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I PDVV YN L     +  +   A +L+DEM   G+  +T  Y + IDG 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A  +F  +       ++  +N LIDG C + R+    EL   +    L+AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
            TYN +IH     G ++ A DL  +M
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEM 456



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PN  TY+++I+G C+      A ++F  MA         C PN +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+IDG C    +D   EL  +M +  +  +  TYN+LIHGF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  G+ P++V+ + +++ LC NGK+                                   
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI  + + Y TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  AV +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 1/267 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF       +A  LF +M+     P+VV F  +M  + +  + D    L + M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +R + + +  L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L+ +M     +P+VV + TL  GL    ++  A  L D M   G+      Y T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 281 CKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A+ L R +  + + + ++  Y+ +ID LCK GR   A  LF  +    +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           + TYN MI   C+ G+   A  L  +M
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM 316



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 83/197 (42%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L  GF     +  A +LF  M       +V  +  L+    + +  +  +SLY +M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I+ D+  +  L        ++  A   F ++ + G+  D   + T + GLC    + EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            LF  +       ++  +  L++GLC+ GR+  A  L   +    L    +TY  ++  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 351 CADGKMDKARDLFLDME 367
           C  G    A +L   ME
Sbjct: 230 CKKGDTVSALNLLRKME 246


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 215/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+PN+ TY  ++NGLC+ G   +A NL  +M     E       N V
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ANVV 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+T+ID LCK    D A  LF +M+++ + PNV+TY+SLI   C    W++A  L  +M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+FN +++   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ +F  M S  C  NV +Y+ LING+CK K I+  + L+ EM  +G+  + V Y TL
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+    + A  +F +M   GV  +   Y T +DGLCKNG + +A+ +F  L+  K 
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E  I  YN +I+G+CK+G+++  W+LF SL    +  DV+ YN MI   C  G  ++A  
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561

Query: 362 LFLDME 367
           LF  M 
Sbjct: 562 LFRKMR 567



 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 201/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G  P+  T+ TLI+GL        A+ L + M          C+PN V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 226

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G +D A  L  KM+   I  NVV Y+++I   C     ++A  LF EM
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+PNV++++ +++ LC   +  +ASRLL  MI+  + PN   +N L+D F   G++
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P+VV YNTL
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++   +LF EM + G+  +T  Y T I G  +      A  +F+ +     
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  YN L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK++   D
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 527 LFCSLSLK 534



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 185/353 (52%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++F +N L++ + +     + ++L E+M       G+    N  TY  +I+  C+   +
Sbjct: 83  PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 136

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  L  KM      P++VT +SL++G+C+    ++A  L  +M++ G +P+ ++F  +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L  + K  EA  L++ M+Q G +PN   Y  +++G C  G ++ A  L   ME+   
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV  YS +I+  CK +  + AL+L++EM +KG++P+V+ Y++L   L    +   A +
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M    +  +   +   ID   K G +VEA +L+  +     + DI  Y+ LI+G C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              RL  A  +F  +       +VVTYN +I+  C   ++D+  +LF +M  +
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 141/254 (55%), Gaps = 6/254 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N LI+   + G  + A  L++EM   +        P+  TY+++I+G C    +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIFTYSSLINGFCMHDRL 381

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+AK +F  M  ++  PNVVTYN+LI+GFC A   +E   LF EM  +G+  N V++  +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++   +    D A  + + M+  GV PN   YNTL+DG C  G++ +A  +F  ++    
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           +  +++Y+I+I G CK  ++E    L+  +  KG+KPDV+IYNT+  G       E A  
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561

Query: 257 LFDEMQRHGVAADT 270
           LF +M+  G   D+
Sbjct: 562 LFRKMREDGPLPDS 575



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/234 (35%), Positives = 138/234 (58%), Gaps = 6/234 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++FTY++LING C       A ++FE M + +      C PN 
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 400

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   +D+  ELF +M    +  N VTY +LIHGF  A D + A+ +F +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++++N +++ LCKNGK+++A  + E + +  + P  + YN +++G C  G+
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           V    +LF S+   G K +V  Y+ +I+G+C+    E A +L+ +M   G  PD
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 132/269 (49%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y  ++    ++   ++A  LF  M+     P++  FN +++ + K  K D    L E M 
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G+  N + YN L++ FC   +++ A  L   M  +G + ++ + S L+NGYC  K I 
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L  +M+  G +PD + + TL  GLF  ++   A  L D M + G   +   Y   +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLCK G I  A  L   +   K E ++  Y+ +ID LCK      A  LF  +    + 
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +V+TY+ +I  LC   +   A  L  DM
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDM 321



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 146/291 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF  M      P++  +N L+        ++    L  +M   G+  N+ ++N+
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  LL  M+++G  P+    ++L++G+C   R++ A  L   M  MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +  +++ LI+G   + +   A++L   M+ +G +P++V Y  +  GL +   ++ AF
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M+   + A+   Y T ID LCK  +  +A+ LF  +       ++  Y+ LI  L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C   R   A  L   +    +  +VVT+N +I A   +GK+ +A  L+ +M
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 216/380 (56%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +P   TY T+++G+C+ G T+ ALNL  +M   +        PN 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M+++ I P++ TYNS+I GFC +  W++A+ L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV++N ++N   K GK  EA  L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+  D   YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D++ YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F  M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 180/386 (46%), Gaps = 42/386 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +  L+  + R     + ++L+++M        + C  +  ++  +I   C    +
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIYSFNILIKCFCSCSKL 130

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+    ++P+VVT+ +L+HG C  +  +EA   F +M +   +PNVV+F  +
Sbjct: 131 PFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTL 190

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG---------------------- 174
           MN LC+ G++ EA  LL+ M++ G++P    Y T++DG                      
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 175 --------------FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                          C  GR + A+ LF  M+  G   ++F+Y+ +I G+C +     A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I PDVV YN L     +  +   A +L+DEM   G+  +T  Y + IDG 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A  +F  +       ++  +N LIDG C + R+    EL   +    L+AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
            TYN +IH     G ++ A DL  +M
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEM 456



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PN  TY+++I+G C+      A ++F  MA         C PN +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+IDG C    +D   EL  +M +  +  +  TYN+LIHGF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  G+ P++V+ + +++ LC NGK+                                   
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI  + + Y TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  AV +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 1/267 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF       +A  LF +M+     P+VV F  +M  + +  + D    L + M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +R + + +N L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             + +M     +P+VV + TL  GL    ++  A  L D M   G+      Y T +DG+
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 281 CKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A+ L R +  + + + ++  Y+ +ID LCK GR   A  LF  +    +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           + TYN MI   C+ G+   A  L  +M
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM 316



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 84/197 (42%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L  GF     +  A +LF  M       +V  +  L+    + +  +  +SLY +M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I+ D+  +N L        ++  A   F ++ + G+  D   + T + GLC    + EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           + F  +       ++  +  L++GLC+ GR+  A  L   +    L    +TY  ++  +
Sbjct: 170 DFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 351 CADGKMDKARDLFLDME 367
           C  G    A +L   ME
Sbjct: 230 CKKGDTVSALNLLRKME 246


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/366 (39%), Positives = 220/366 (60%), Gaps = 8/366 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G +P+  T+ TL+ GLC  G    AL++F++M  G G      +PN VT
Sbjct: 110 ALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV-GEG-----FQPNVVT 163

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+++GLCK+  + +A  LF +M  + I+P++ TYNSLIH  C   +W     L  EM+
Sbjct: 164 YGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 223

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              + PNVVS N++++ LCK GK+ EA  ++++MIQ GV P+   Y  LMDG CL   ++
Sbjct: 224 KSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F  M   GC  NV SY+ LINGYCK + I+ A+ L+ EM  + + P+ + Y+TL 
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL  + +++ A  LF+EM   G   +   Y   +D LCKN  + EA+ L + +     +
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLD 403

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARD 361
            D++ YN  IDG+C++G L+ A +LF +L PRG L  DV T+NIMI  LC  G +D+A  
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG-LQPDVWTHNIMIRGLCKRGLLDEASK 462

Query: 362 LFLDME 367
           LF +M+
Sbjct: 463 LFREMD 468



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/382 (32%), Positives = 187/382 (48%), Gaps = 29/382 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------NGEF 52
           EA  +F K+   G +PNV TY TL+NGLC+      ALNLF EM A G        N   
Sbjct: 144 EALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLI 203

Query: 53  GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
             +C                     PN V+   ++D LCKEG V +A ++   M    + 
Sbjct: 204 HALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVE 263

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+VVTY +L+ G C  ++ +EA  +F  M+  G   NVVS+N ++N  CK  ++D+A  L
Sbjct: 264 PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYL 323

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E M +  + PN   Y+TL+ G C  GR+  A  LF  M + G   N+ +YSIL++  CK
Sbjct: 324 FEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCK 383

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  +  A++L   +    + PDV +YN    G+     +E A  LF  +   G+  D W 
Sbjct: 384 NHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWT 443

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           +   I GLCK G + EA +LFR +       +   YN +  GL ++ +   A +L   + 
Sbjct: 444 HNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEML 503

Query: 333 RGVLIADVVTYNIMIHALCADG 354
                ADV T  +++  L  DG
Sbjct: 504 ARGFSADVSTTALLVKMLSDDG 525



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 153/291 (52%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M   +  P +  +  L+        ++    L  +M   G+ P+V +  +
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++D A  +L  ++++G +P+   + TL+ G C+ G++  A ++F  M   G
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV +Y  L+NG CK++++  AL+L+SEM++KGI PD+  YN+L   L  + + +   
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L +EM +  +  +  +    +D LCK G + EA ++   +     E D+  Y  L+DG 
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGH 276

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C    +  A ++F  + R   + +VV+YN +I+  C   ++DKA  LF +M
Sbjct: 277 CLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEM 327



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 154/312 (49%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            P    +  ++  + K         L  KM    I P+V T   +I+ FC+ N  + A  
Sbjct: 53  PPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALS 112

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +++  G QP+  +F  ++  LC  GK+ EA  + + M+  G +PN   Y TLM+G C
Sbjct: 113 VLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLC 172

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              ++  A  LF  M + G   ++F+Y+ LI+  C   E +   +L +EM+   I P+VV
Sbjct: 173 KDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVV 232

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             N +   L +  +V  A  + D M + GV  D   Y   +DG C    + EAV++F  +
Sbjct: 233 SLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMM 292

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++ +YN LI+G CK  R+  A  LF  + R  LI + +TY+ +IH LC  G++
Sbjct: 293 VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRL 352

Query: 357 DKARDLFLDMEA 368
             A  LF +M A
Sbjct: 353 QDAIALFNEMVA 364



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 121/255 (47%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N  ++A   F  M+     P +  F  ++  + K         L + M   G+ P+ +  
Sbjct: 35  NTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTL 94

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             +++ FC   RV+ A  +   +  +G + +  +++ L+ G C   +I  AL ++ +M+ 
Sbjct: 95  TIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVG 154

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P+VV Y TL  GL +  Q+  A  LF EM   G++ D + Y + I  LC       
Sbjct: 155 EGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKH 214

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
              L   +   K   ++ + N ++D LCK G++  A ++   + +G +  DVVTY  ++ 
Sbjct: 215 VTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMD 274

Query: 349 ALCADGKMDKARDLF 363
             C   +MD+A  +F
Sbjct: 275 GHCLRSEMDEAVKVF 289



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 7/150 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +     +P+V  YN  I+G+CR G    A +LF  +A          +P+  
Sbjct: 389 EAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG------LQPDVW 442

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I GLCK G +D+A +LF +M +     N  TYN++  G    N  + A  L  EM
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           + +G   +V +  +++  L  +G +D++ +
Sbjct: 503 LARGFSADVSTTALLVKMLSDDG-LDQSVK 531



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 70/154 (45%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ALS +  ML     P +  +  L   + ++        L  +M   G+  D +    
Sbjct: 37  LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+  C    +  A+ +   +  L ++ D   +  L+ GLC  G++  A ++F  +    
Sbjct: 97  VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +VVTY  +++ LC D ++ +A +LF +M AK
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAK 190


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 216/380 (56%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +P   TY T+++G+C+ G T+ ALNL  +M   +        PN 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M+++ I P++ TYNS+I GFC +  W++A+ L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV++N ++N   K GK  EA  L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+  D   YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D++ YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F  M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 183/386 (47%), Gaps = 42/386 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +  L+  + R     + ++L+++M        + C  +  ++T +I   C    +
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIYSFTILIKCFCSCSKL 130

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+    ++P+VVT+N+L+HG C  +  +EA  LF +M +   +PNVV+F  +
Sbjct: 131 PFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL 190

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG---------------------- 174
           MN LC+ G++ EA  LL+ M++ G++P    Y T++DG                      
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 175 --------------FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                          C  GR + A+ LF  M+  G   ++F+Y+ +I G+C +     A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I PDVV YN L     +  +   A +L+DEM   G+  +T  Y + IDG 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A  +F  +       ++  +N LIDG C + R+    EL   +    L+AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
            TYN +IH     G ++ A DL  +M
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEM 456



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PN  TY+++I+G C+      A ++F  MA         C PN +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+IDG C    +D   EL  +M +  +  +  TYN+LIHGF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  G+ P++V+ + +++ LC NGK+                                   
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI  + + Y TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  AV +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 127/267 (47%), Gaps = 1/267 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF       +A  LF +M+     P+VV F  +M  + +  + D    L + M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +R + + +  L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L+ +M     +P+VV + TL  GL    ++  A  L D M   G+      Y T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 281 CKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A+ L R +  + + + ++  Y+ +ID LCK GR   A  LF  +    +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           + TYN MI   C+ G+   A  L  +M
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM 316



 Score = 63.5 bits (153), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 83/197 (42%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L  GF     +  A +LF  M       +V  +  L+    + +  +  +SLY +M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I+ D+  +  L        ++  A   F ++ + G+  D   + T + GLC    + EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            LF  +       ++  +  L++GLC+ GR+  A  L   +    L    +TY  ++  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 351 CADGKMDKARDLFLDME 367
           C  G    A +L   ME
Sbjct: 230 CKKGDTVSALNLLRKME 246


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 216/380 (56%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +P   TY T+++G+C+ G T+ ALNL  +M   +        PN 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHII-----PNV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M+++ I P++ TYNS+I GFC +  W++A+ L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV++N ++N   K GK  EA  L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+  D   YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D++ YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F  M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 181/386 (46%), Gaps = 42/386 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +  L+  + R     + ++L+++M        + C  +  ++  +I   C    +
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIYSFNILIKCFCSCSKL 130

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+    ++P+VVT+ +L+HG C  +  +EA  LF +M +   +PNVV+F  +
Sbjct: 131 PFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL 190

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG---------------------- 174
           MN LC+ G++ EA  LL+ M++ G++P    Y T++DG                      
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSH 250

Query: 175 --------------FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                          C  GR + A+ LF  M+  G   ++F+Y+ +I G+C +     A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I PDVV YN L     +  +   A +L+DEM   G+  +T  Y + IDG 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A  +F  +       ++  +N LIDG C + R+    EL   +    L+AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
            TYN +IH     G ++ A DL  +M
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEM 456



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PN  TY+++I+G C+      A ++F  MA         C PN +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+IDG C    +D   EL  +M +  +  +  TYN+LIHGF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  G+ P++V+ + +++ LC NGK+                                   
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI  + + Y TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  AV +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 128/267 (47%), Gaps = 1/267 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF       +A  LF +M+     P+VV F  +M  + +  + D    L + M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +R + + +N L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L+ +M     +P+VV + TL  GL    ++  A  L D M   G+      Y T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 281 CKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A+ L R +  + + + ++  Y+ +ID LCK GR   A  LF  +    +  D
Sbjct: 230 CKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           + TYN MI   C+ G+   A  L  +M
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM 316



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 84/197 (42%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L  GF     +  A +LF  M       +V  +  L+    + +  +  +SLY +M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I+ D+  +N L        ++  A   F ++ + G+  D   + T + GLC    + EA+
Sbjct: 110 IRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEAL 169

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            LF  +       ++  +  L++GLC+ GR+  A  L   +    L    +TY  ++  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 351 CADGKMDKARDLFLDME 367
           C  G    A +L   ME
Sbjct: 230 CKKGDTVSALNLLRKME 246


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  271 bits (692), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 142/359 (39%), Positives = 217/359 (60%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           KL   G + N  +Y TLING+C+ G T  A+    ++       G + KP+ V Y TIID
Sbjct: 154 KLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKID------GRLTKPDVVMYNTIID 207

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            +CK   V +A  LF +M  + I+ +VVTYN+LI+GFC      EA  L  EM+ + + P
Sbjct: 208 AMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINP 267

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NV ++N++++ LCK GK+ EA  +L +M++  V+P+   Y+TLMDG+ L   V +A+ +F
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            +M  MG   +V +Y+ILING+CKNK ++ AL+L+ EM  K + P +V Y++L  GL + 
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++   + L DEM+  G  AD   Y + IDGLCKNG++  A+ LF  ++  +   +I  +
Sbjct: 388 GRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L+DGLCK GRLK A E+F+ L       +V TYN+MI+  C  G +++A  +   ME
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +L + G +P++ T N LIN  C  G      ++  ++            P+TVT
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG------YPPDTVT 131

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T+I GLC +G V KA     K+  +    N V+Y +LI+G C   D   A     ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKID 191

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +P+VV +N I++ +CK   + EA  L   M   G+  +   YNTL+ GFC+ G++ 
Sbjct: 192 GRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLK 251

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M       NV++Y+IL++  CK  +++ A S+ + ML   +KPDV+ Y+TL 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F +++V++A  +F+ M   GV  D   Y   I+G CKN  + EA+ LF+ +      
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             I  Y+ LIDGLCKSGR+   W+L   +      ADV+TY+ +I  LC +G +D+A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 363 FLDME 367
           F  M+
Sbjct: 432 FNKMK 436



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++  K+   G  P+  T NTLI GLC  G    AL+  +++     +       N V+Y 
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL------NQVSYA 168

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G+CK G    A +   K+      P+VV YN++I   C     +EA  LF EM  +
Sbjct: 169 TLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVK 228

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+  +VV++N ++   C  GK+ EA  LL  M+   + PN + YN L+D  C  G+V  A
Sbjct: 229 GISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + +   M     K +V +YS L++GY    E++ A  +++ M   G+ PDV  Y  L  G
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   V+ A  LF EM +  +      Y + IDGLCK+G I    +L   +R      D
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPAD 408

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+ LIDGLCK+G L  A  LF  +    +  ++ T+ I++  LC  G++  A+++F 
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 365 DMEAK 369
           D+  K
Sbjct: 469 DLLTK 473



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 179/354 (50%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V  YNT+I+ +C+      A  LF EMA            + VTY T+I G C  G 
Sbjct: 196 KPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKG------ISADVVTYNTLIYGFCIVGK 249

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A  L  +M  + INPNV TYN L+   C      EAK +   M+   V+P+V++++ 
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +M+      ++ +A  +   M  +GV P+   Y  L++GFC    V+ A  LF  M    
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
               + +YS LI+G CK+  I     L  EM  +G   DV+ Y++L  GL +   ++RA 
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF++M+   +  + + +   +DGLCK G + +A E+F+ L    Y L++  YN +I+G 
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G L+ A  +   +     I +  T+  +I AL    + DKA  L   M A+
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 176/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++ V G   +V TYNTLI G C  G    A+ L  EM            PN  
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK------TINPNVY 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D LCKEG V +AK +   M    + P+V+TY++L+ G+    +  +A+ +F  M
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V ++ +++N  CKN  +DEA  L + M Q  + P    Y++L+DG C +GR+
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +   +L   M   G   +V +YS LI+G CKN  ++ A++L+++M  + I+P++  +  L
Sbjct: 391 SYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A ++F ++   G   + + Y   I+G CK G + EA+ +   +     
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             +   +  +I  L K      A +L R +  RG+L
Sbjct: 511 IPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 148/288 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A   F +M      P ++ +N ++  F     ++ A  L   +  +G+QP++++ N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C  G++     +L  +++ G  P+    NTL+ G CL G+V +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  SY+ LING CK  +   A+    ++  +  KPDVV+YNT+   + +   V  A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++AD   Y T I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           CK G++K A  +   + +  +  DV+TY+ ++       ++ KA+ +F
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 154/312 (49%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+D   K      A  L  +++ + I P+++T N LI+ FC+         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++ +G  P+ V+ N ++  LC  G++ +A    + ++  G + N   Y TL++G C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +    ++    K +V  Y+ +I+  CK + +  A  L+SEM  KGI  DVV 
Sbjct: 177 IGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVT 236

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNTL  G   + +++ A  L +EM    +  + + Y   +D LCK G + EA  +   + 
Sbjct: 237 YNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+  Y+ L+DG      +K A  +F ++    +  DV TY I+I+  C +  +D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 358 KARDLFLDMEAK 369
           +A +LF +M  K
Sbjct: 357 EALNLFKEMHQK 368



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 112/224 (50%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A      M+ +   P    +N ++D F      + A  L   +E  G + ++ + +I
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN +C   +I    S+ +++L +G  PD V  NTL  GL    QV++A    D++   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +  +Y T I+G+CK G    A++  R +     + D+  YN +ID +CK   +  A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAY 219

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LF  +    + ADVVTYN +I+  C  GK+ +A  L  +M  K
Sbjct: 220 GLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLK 263


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  270 bits (691), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 140/366 (38%), Positives = 216/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+PN+ TY  ++NGLC+ G   +A NL  +M     E  VV      
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV------ 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + TIID LCK   VD A  LF +M+ + I PNVVTY+SLI   C    W++A  L  +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+V+FN +++   K GK  EA +L + MI+  + P+ F YN+L++GFC+  R+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A+++F  M S  C  ++ +Y+ LI G+CK+K +E    L+ EM  +G+  D V Y TL
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF     + A K+F +M   GV  D   Y   +DGLC NG + +A+E+F  ++  + 
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LDI  Y  +I+G+CK+G++   W+LF SL    +  +VVTYN MI  LC+   + +A  
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486

Query: 362 LFLDME 367
           L   M+
Sbjct: 487 LLKKMK 492



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 198/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G  P+  T+ TLI+GL        A+ L + M          C+PN V
Sbjct: 98  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 151

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G +D A  L  KM+   I  +VV +N++I   C     ++A  LF EM
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVV+++ +++ LC  G+  +AS+LL  MI+  + PN   +N L+D F   G+ 
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L   M       ++F+Y+ LING+C +  ++ A  ++  M+SK   PD+  YNTL
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +VE   +LF EM   G+  DT  Y T I GL  +G    A ++F+ +     
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  Y+ L+DGLC +G+L+ A E+F  + +  +  D+  Y  MI  +C  GK+D   D
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 452 LFCSLSLK 459



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 190/385 (49%), Gaps = 41/385 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++F +N L++ + +     + ++L E+M       G+    N  TY  +I+  C+   +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 61

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  L  KM      P++VT +SL++G+C+    ++A  L  +M++ G +P+ ++F  +
Sbjct: 62  SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L  + K  EA  L++ M+Q G +PN   Y  +++G C  G ++ A  L   ME+   
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL--------------- 241
           + +V  ++ +I+  CK + ++ AL+L+ EM +KGI+P+VV Y++L               
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241

Query: 242 ----------------FIGLFEIHQVERAF----KLFDEMQRHGVAADTWAYRTFIDGLC 281
                           F  L +    E  F    KL D+M +  +  D + Y + I+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
            +  + +A ++F  +       D+  YN LI G CKS R++   ELFR +    L+ D V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361

Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
           TY  +I  L  DG  D A+ +F  M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQM 386



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 163/309 (52%), Gaps = 7/309 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN+ T+N LI+   + G  + A  L ++M   + +      P+  TY ++I+G C    +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID------PDIFTYNSLINGFCMHDRL 306

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKAK++F  M  ++  P++ TYN+LI GFC +    +   LF EM  +G+  + V++  +
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L  +G  D A ++ + M+  GV P+   Y+ L+DG C  G++ +A E+F  M+    
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +++ Y+ +I G CK  +++    L+  +  KG+KP+VV YNT+  GL     ++ A+ 
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M+  G   D+  Y T I    ++G    + EL R +R  ++  D      L+  + 
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 545

Query: 317 KSGRLKIAW 325
             GRL  ++
Sbjct: 546 HDGRLDKSF 554



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 164/312 (52%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   +  ++  + K    D    L  KM+   I+ N+ TYN LI+ FC  +  + A  L
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P++V+ + ++N  C   ++ +A  L++ M+++G RP+   + TL+ G  L
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             + + A  L   M   GC+ N+ +Y +++NG CK  +I+ A +L ++M +  I+ DVVI
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +NT+   L +   V+ A  LF EM+  G+  +   Y + I  LC  G   +A +L   + 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K   ++  +N LID   K G+   A +L   + +  +  D+ TYN +I+  C   ++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 358 KARDLFLDMEAK 369
           KA+ +F  M +K
Sbjct: 308 KAKQMFEFMVSK 319



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 110/214 (51%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++    P+ F +N L+       + +    L   M+ +G  HN+++Y+ILIN +C+  +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I  AL+L  +M+  G +P +V  ++L  G     ++  A  L D+M   G   DT  + T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I GL  +    EAV L   +     + ++  Y  +++GLCK G + +A+ L   +    
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + ADVV +N +I +LC    +D A +LF +ME K
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  270 bits (691), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 218/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA      +   G   + F+Y TLINGLC+ G T  AL +  ++       G + K N V
Sbjct: 156 EALHFHDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKID------GKLVKINVV 209

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LCK   V  A EL+ +M  + I+P+VVT+++LI+GFC      EA  LF EM
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREM 269

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+  +FN++++ LCK G +  A  +L +M++ GV PN   Y++LMDG+CL  +V
Sbjct: 270 VLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQV 329

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A+ +  ++  MG   N  SY  +ING+CK K ++ ALSL+++M  KGI PD V YN+L
Sbjct: 330 NKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSL 389

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++  A++L DEM  +G  A+ + Y   ID LCKN ++ +A+ L + ++    
Sbjct: 390 IDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGI 449

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  +N LI GLCK GRLK A ++F+ L       +  TYNIM++ LC +G  D+A  
Sbjct: 450 QPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEA 509

Query: 362 LFLDME 367
           L   M+
Sbjct: 510 LLSKMD 515



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 175/339 (51%), Gaps = 7/339 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L+ ++      P+V T++ LI G C  G    A  LF EM   N        P+ 
Sbjct: 225 IDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKN------INPDY 278

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  ++D LCKEG +  AK + + M  E + PNVVTY+SL+ G+C  N  N+AK +   
Sbjct: 279 YTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNT 338

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G  PN  S+  ++N  CK   +DEA  L   M   G+ P+   YN+L+DG C +GR
Sbjct: 339 ISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGR 398

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A EL   M   G   N+F+Y+ LI+  CKN  ++ A++L  ++  +GI+PD+  +N 
Sbjct: 399 ISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNI 458

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++ +++ A  +F ++   G + + W Y   ++GLCK G   EA  L   +    
Sbjct: 459 LIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNG 518

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIA 338
              D   Y  LI  L      + A +L R +  R V+ A
Sbjct: 519 IIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYA 557



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 177/392 (45%), Gaps = 76/392 (19%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +L   G  P++FT+N LIN  C              MA  N  F ++ K     
Sbjct: 87  AISLSRRLEFHGITPDIFTFNILINCYCH-------------MAEMNFAFSMMAK----- 128

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
                                LKM  E   P+ +T+N+LI G C      EA      ++
Sbjct: 129 --------------------ILKMGYE---PDTITFNTLIKGLCLNGKVKEALHFHDHVL 165

Query: 123 DQG-----------------------------------VQPNVVSFNVIMNELCKNGKMD 147
             G                                   V+ NVV +N I++ LCK+  + 
Sbjct: 166 ALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVI 225

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A  L   MI   + P+   ++ L+ GFC+ G++  A  LF  M       + ++++IL+
Sbjct: 226 DAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILV 285

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +  CK   ++GA ++   M+ +G+ P+VV Y++L  G   ++QV +A  + + + + G A
Sbjct: 286 DALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAA 345

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +  +Y T I+G CK   + EA+ LF  ++      D   YN LIDGLCKSGR+  AWEL
Sbjct: 346 PNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWEL 405

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +      A++ TYN +I ALC +  +D+A
Sbjct: 406 VDEMHDNGQPANIFTYNCLIDALCKNHHVDQA 437



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/317 (28%), Positives = 160/317 (50%), Gaps = 4/317 (1%)

Query: 57  KPNT--VTYTTIIDGLCKEG--FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           KP +  + +  I+  L K        A  L  +++   I P++ T+N LI+ +C+  + N
Sbjct: 61  KPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMN 120

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
            A  +  +++  G +P+ ++FN ++  LC NGK+ EA    + ++ +G   + F Y TL+
Sbjct: 121 FAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLI 180

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +G C  G    A ++   ++    K NV  Y+ +I+  CK+K +  A  LYS+M++K I 
Sbjct: 181 NGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKIS 240

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PDVV ++ L  G   + Q+E AF LF EM    +  D + +   +D LCK G +  A  +
Sbjct: 241 PDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNM 300

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
              +       ++  Y+ L+DG C   ++  A  +  ++ +     +  +Y  MI+  C 
Sbjct: 301 LVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCK 360

Query: 353 DGKMDKARDLFLDMEAK 369
              +D+A  LF DM+ K
Sbjct: 361 IKMVDEALSLFNDMQFK 377


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 217/380 (57%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +P   TY T+++G+C+ G T+ AL+L  +M     E   +  PN 
Sbjct: 201 VEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKME----EISHII-PNV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M+++ I P++ TYNS+I GFC +  W++A+ L  E
Sbjct: 256 VIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQE 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV++N ++N   K GK  EA  L + M+  G+ PN   Y++++DGFC   R
Sbjct: 316 MLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNR 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE +F  M + GC  N+ +++ LI+GYC  K I+  + L  EM   G+  D   YNT
Sbjct: 376 LDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G + +  +  A  L  EM   G+  D     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 436 LIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +L           D++ YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 496 KDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 555

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F  M +K
Sbjct: 556 LCKQSRLDEATQMFDSMGSK 575



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 183/386 (47%), Gaps = 42/386 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +  L+  + R     + ++L+++M        + C  +  ++T +I   C    +
Sbjct: 77  PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ----IRC--DIYSFTILIKCFCSCSKL 130

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+    ++P+VVT+N+L+HG C  +  +EA  LF +M +   +PNVV+F  +
Sbjct: 131 PFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTL 190

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG---------------------- 174
           MN LC+ G++ EA  LL+ M++ G++P    Y T++DG                      
Sbjct: 191 MNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISH 250

Query: 175 --------------FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                          C  GR + A+ LF  M+  G   ++F+Y+ +I G+C +     A 
Sbjct: 251 IIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAE 310

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I PDVV YN L     +  +   A +L+DEM   G+  +T  Y + IDG 
Sbjct: 311 QLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGF 370

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A  +F  +       ++  +N LIDG C + R+    EL   +    L+AD 
Sbjct: 371 CKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADT 430

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
            TYN +IH     G ++ A DL  +M
Sbjct: 431 TTYNTLIHGFYLVGDLNAALDLLQEM 456



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PN  TY+++I+G C+      A ++F  MA         C PN +
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPNLI 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+IDG C    +D   EL  +M +  +  +  TYN+LIHGF    D N A  L  EM
Sbjct: 397 TFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEM 456

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  G+ P++V+ + +++ LC NGK+                                   
Sbjct: 457 ISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNI 516

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L E M   G+ P+   Y++++DG C   R++ A ++F SM S  
Sbjct: 517 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKS 576

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ LINGYCK   ++  L L+ EM  +GI  + + Y TL  G  ++  +  A 
Sbjct: 577 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGAL 636

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            +F EM   GV  DT   R  + GL     +  AV +   L++
Sbjct: 637 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQM 679



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/267 (28%), Positives = 128/267 (47%), Gaps = 1/267 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF       +A  LF +M+     P+VV F  +M  + +  + D    L + M +  
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +R + + +  L+  FC   ++  A   F  +  +G   +V +++ L++G C    +  AL
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L+ +M     +P+VV + TL  GL    ++  A  L D M   G+      Y T +DG+
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 281 CKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A++L R +  + + + ++  Y+ +ID LCK GR   A  LF  +    +  D
Sbjct: 230 CKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPD 289

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           + TYN MI   C+ G+   A  L  +M
Sbjct: 290 LFTYNSMIVGFCSSGRWSDAEQLLQEM 316



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 83/197 (42%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L  GF     +  A +LF  M       +V  +  L+    + +  +  +SLY +M  K 
Sbjct: 50  LQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQ 109

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I+ D+  +  L        ++  A   F ++ + G+  D   + T + GLC    + EA+
Sbjct: 110 IRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEAL 169

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            LF  +       ++  +  L++GLC+ GR+  A  L   +    L    +TY  ++  +
Sbjct: 170 NLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGM 229

Query: 351 CADGKMDKARDLFLDME 367
           C  G    A DL   ME
Sbjct: 230 CKIGDTVSALDLLRKME 246


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 140/366 (38%), Positives = 216/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+PN+ TY  ++NGLC+ G   +A NL  +M     E  VV      
Sbjct: 132 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV------ 185

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + TIID LCK   VD A  LF +M+ + I PNVVTY+SLI   C    W++A  L  +M
Sbjct: 186 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 245

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+V+FN +++   K GK  EA +L + MI+  + P+ F YN+L++GFC+  R+
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A+++F  M S  C  ++ +Y+ LI G+CK+K +E    L+ EM  +G+  D V Y TL
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF     + A K+F +M   GV  D   Y   +DGLC NG + +A+E+F  ++  + 
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LDI  Y  +I+G+CK+G++   W+LF SL    +  +VVTYN MI  LC+   + +A  
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485

Query: 362 LFLDME 367
           L   M+
Sbjct: 486 LLKKMK 491



 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 198/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G  P+  T+ TLI+GL        A+ L + M          C+PN V
Sbjct: 97  DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 150

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G +D A  L  KM+   I  +VV +N++I   C     ++A  LF EM
Sbjct: 151 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 210

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNVV+++ +++ LC  G+  +AS+LL  MI+  + PN   +N L+D F   G+ 
Sbjct: 211 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 270

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L   M       ++F+Y+ LING+C +  ++ A  ++  M+SK   PD+  YNTL
Sbjct: 271 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 330

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +VE   +LF EM   G+  DT  Y T I GL  +G    A ++F+ +     
Sbjct: 331 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  Y+ L+DGLC +G+L+ A E+F  + +  +  D+  Y  MI  +C  GK+D   D
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 450

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 451 LFCSLSLK 458



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 160/305 (52%), Gaps = 7/305 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN+ T+N LI+   + G  + A  L ++M   +        P+  TY ++I+G C    +
Sbjct: 252 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS------IDPDIFTYNSLINGFCMHDRL 305

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKAK++F  M  ++  P++ TYN+LI GFC +    +   LF EM  +G+  + V++  +
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L  +G  D A ++ + M+  GV P+   Y+ L+DG C  G++ +A E+F  M+    
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +++ Y+ +I G CK  +++    L+  +  KG+KP+VV YNT+  GL     ++ A+ 
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M+  G   D+  Y T I    ++G    + EL R +R  ++  D      L+  + 
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 544

Query: 317 KSGRL 321
             GRL
Sbjct: 545 HDGRL 549



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 174/358 (48%), Gaps = 41/358 (11%)

Query: 50  GEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFL--KMKDENINPNVVTYNSLIH 103
           G FG + K    P+   +  ++  + K    D    L L  KM      P++VT +SL++
Sbjct: 28  GLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLN 87

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           G+C+    ++A  L  +M++ G +P+ ++F  +++ L  + K  EA  L++ M+Q G +P
Sbjct: 88  GYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP 147

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N   Y  +++G C  G ++ A  L   ME+   + +V  ++ +I+  CK + ++ AL+L+
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207

Query: 224 SEMLSKGIKPDVVIYNTL-------------------------------FIGLFEIHQVE 252
            EM +KGI+P+VV Y++L                               F  L +    E
Sbjct: 208 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 267

Query: 253 RAF----KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             F    KL D+M +  +  D + Y + I+G C +  + +A ++F  +       D+  Y
Sbjct: 268 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 327

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N LI G CKS R++   ELFR +    L+ D VTY  +I  L  DG  D A+ +F  M
Sbjct: 328 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 385



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 153/296 (51%), Gaps = 2/296 (0%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI--EMMDQGVQPNVVSF 133
           +D A  LF  M      P++  +N L+        ++    L +  +MM  G +P++V+ 
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++N  C   ++ +A  L++ M+++G RP+   + TL+ G  L  + + A  L   M  
Sbjct: 83  SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ N+ +Y +++NG CK  +I+ A +L ++M +  I+ DVVI+NT+   L +   V+ 
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF EM+  G+  +   Y + I  LC  G   +A +L   +   K   ++  +N LID
Sbjct: 203 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 262

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              K G+   A +L   + +  +  D+ TYN +I+  C   ++DKA+ +F  M +K
Sbjct: 263 AFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 138/366 (37%), Positives = 216/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++ TY T++NGLC+ G   +AL+L ++M  G  E  VV      
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------ 259

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIIDGLCK   +D A  LF +M ++ I P+V TY+SLI   C    W++A  L  +M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PNVV+F+ +++   K GK+ EA +L + MI+  + P+ F Y++L++GFC+  R+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ +F  M S  C  NV +YS LI G+CK K +E  + L+ EM  +G+  + V Y TL
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+    + A  +F +M   GV  +   Y   +DGLCKNG + +A+ +F  L+    
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E DI  YN +I+G+CK+G+++  WELF +L    +  +V+ YN MI   C  G  ++A  
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559

Query: 362 LFLDME 367
           L   M+
Sbjct: 560 LLKKMK 565



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 208/368 (56%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G +P+ FT+ TLI+GL        A+ L ++M          C+P+ V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG------CQPDLV 224

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++GLCK G +D A  L  KM+   I  +VV YN++I G C     ++A  LF EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+V +++ +++ LC  G+  +ASRLL  MI+  + PN   ++ L+D F   G++
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L+  M       ++F+YS LING+C +  ++ A  ++  M+SK   P+VV Y+TL
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +VE   +LF EM + G+  +T  Y T I G  +      A  +F+ +  +  
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  YN L+DGLCK+G+L  A  +F  L R  +  D+ TYNIMI  +C  GK++   +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524

Query: 362 LFLDMEAK 369
           LF ++  K
Sbjct: 525 LFCNLSLK 532



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 152/270 (56%), Gaps = 6/270 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++FTY++LING C       A ++FE M + +      C PN 
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 398

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I G CK   V++  ELF +M    +  N VTY +LIHGF  A D + A+ +F +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++++N++++ LCKNGK+ +A  + E + +  + P+ + YN +++G C  G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    ELF ++   G   NV +Y+ +I+G+C+    E A SL  +M   G  P+   YNT
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           L          E + +L  EM+  G A D 
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDA 608



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 192/371 (51%), Gaps = 12/371 (3%)

Query: 2   EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A  LF   +K R F   P++  +N L++ + +     + ++L E+M       G+    
Sbjct: 66  DAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI--SH 116

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  TY+  I+  C+   +  A  +  KM      P++VT +SL++G+C++   ++A  L 
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M++ G +P+  +F  +++ L  + K  EA  L++ M+Q G +P+   Y T+++G C  
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++ A  L   ME    + +V  Y+ +I+G CK K ++ AL+L++EM +KGI+PDV  Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           ++L   L    +   A +L  +M    +  +   +   ID   K G +VEA +L+  +  
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + DI  Y+ LI+G C   RL  A  +F  +       +VVTY+ +I   C   ++++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416

Query: 359 ARDLFLDMEAK 369
             +LF +M  +
Sbjct: 417 GMELFREMSQR 427



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 153/291 (52%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A +LF  M      P++V +N L+      N +     L  +M   G+  ++ ++++
Sbjct: 64  VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
            +N  C+  ++  A  +L  M+++G  P+    ++L++G+C + R++ A  L   M  MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K + F+++ LI+G   + +   A++L  +M+ +G +PD+V Y T+  GL +   ++ A 
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  +M++  + AD   Y T IDGLCK  ++ +A+ LF  +       D+  Y+ LI  L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  +VVT++ +I A   +GK+ +A  L+ +M
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 141/293 (48%), Gaps = 16/293 (5%)

Query: 79  AKELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           AK LF+    + I   P V ++ +L    C+   +  A   + E              ++
Sbjct: 9   AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
            N L    K+D+A  L   M++    P+   +N L+       +      L   M+++G 
Sbjct: 55  RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
            H++++YSI IN +C+  ++  AL++ ++M+  G +PD+V  ++L  G     ++  A  
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D+M   G   DT+ + T I GL  +    EAV L   +     + D+  Y  +++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G + +A  L + + +G + ADVV YN +I  LC    MD A +LF +M+ K
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 110/236 (46%), Gaps = 29/236 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN----GN-------- 49
           EA  +F  +    C PNV TY+TLI G C+       + LF EM+     GN        
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 50  -GEF----------------GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G F                 V   PN +TY  ++DGLCK G + KA  +F  ++   + 
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++ TYN +I G C A    +   LF  +  +GV PNV+++N +++  C+ G  +EA  L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           L+ M + G  PN+  YNTL+      G    + EL   M S G   +  +  ++ N
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 30/176 (17%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV-------- 54
           A  +F ++   G  PN+ TYN L++GLC+ G    A+ +FE +     E  +        
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511

Query: 55  -VCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
            +CK                    PN + Y T+I G C++G  ++A  L  KMK++   P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N  TYN+LI       D   +  L  EM   G   +  +  ++ N L  +G++D++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 143/359 (39%), Positives = 218/359 (60%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           KL   G + N  +Y TLING+C+ G T  A+ L  ++       G + KPN   Y+TIID
Sbjct: 154 KLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID------GRLTKPNVEMYSTIID 207

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK   V +A  LF +M  + I+ +VVTY++LI+GFC      EA  L  EM+ + + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NV ++N++++ LCK GK+ EA  +L +M++  V+P+   Y+TLMDG+ L   V +A+ +F
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            +M  MG   +V +Y+ILING+CKNK ++ AL+L+ EM  K + P +V Y++L  GL + 
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++   + L DEM+  G  AD   Y + IDGLCKNG++  A+ LF  ++  +   +I  +
Sbjct: 388 GRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTF 447

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L+DGLCK GRLK A E+F+ L       +V TYN+MI+  C  G +++A  +   ME
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +L + G +P++ T N LIN  C  G      ++  ++            P+TVT
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG------YPPDTVT 131

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T+I GLC +G V KA     K+  +    N V+Y +LI+G C   D   A  L  ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 191

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNV  ++ I++ LCK   + EA  L   M   G+  +   Y+TL+ GFC+ G++ 
Sbjct: 192 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M       NV++Y+IL++  CK  +++ A S+ + ML   +KPDV+ Y+TL 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F +++V++A  +F+ M   GV  D   Y   I+G CKN  + EA+ LF+ +      
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             I  Y+ LIDGLCKSGR+   W+L   +      ADV+TY+ +I  LC +G +D+A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIAL 431

Query: 363 FLDME 367
           F  M+
Sbjct: 432 FNKMK 436



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++  K+   G  P+  T NTLI GLC  G    AL+  +++     +       N V+Y 
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL------NQVSYA 168

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G+CK G    A +L  K+      PNV  Y+++I   C     +EA  LF EM  +
Sbjct: 169 TLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK 228

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+  +VV+++ ++   C  GK+ EA  LL  M+   + PN + YN L+D  C  G+V  A
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + +   M     K +V +YS L++GY    E++ A  +++ M   G+ PDV  Y  L  G
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   V+ A  LF EM +  +      Y + IDGLCK+G I    +L   +R      D
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPAD 408

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+ LIDGLCK+G L  A  LF  +    +  ++ T+ I++  LC  G++  A+++F 
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 365 DMEAK 369
           D+  K
Sbjct: 469 DLLTK 473



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 180/354 (50%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PNV  Y+T+I+ LC+      A  LF EM             + VTY+T+I G C EG 
Sbjct: 196 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG------ISADVVTYSTLIYGFCIEGK 249

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A  L  +M  + INPNV TYN L+   C      EAK +   M+   V+P+V++++ 
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +M+      ++ +A  +   M  +GV P+   Y  L++GFC    V+ A  LF  M    
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
               + +YS LI+G CK+  I     L  EM  +G   DV+ Y++L  GL +   ++RA 
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF++M+   +  + + +   +DGLCK G + +A E+F+ L    Y L++  YN +I+G 
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G L+ A  +   +     I +  T+  +I AL    + DKA  L   M A+
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/336 (30%), Positives = 175/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++ V G   +V TY+TLI G C  G    A+ L  EM            PN  
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK------TINPNVY 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D LCKEG V +AK +   M    + P+V+TY++L+ G+    +  +A+ +F  M
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V ++ +++N  CKN  +DEA  L + M Q  + P    Y++L+DG C +GR+
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +L   M   G   +V +YS LI+G CKN  ++ A++L+++M  + I+P++  +  L
Sbjct: 391 PYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A ++F ++   G   + + Y   I+G CK G + EA+ +   +     
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGC 510

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             +   +  +I  L K      A +L R +  RG+L
Sbjct: 511 IPNAFTFETIIIALFKKDENDKAEKLLRQMIARGLL 546



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 149/288 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A   F +M      P ++ +N ++  F     ++ A  L   +  +G+QP++++ N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C  G++     +L  +++ G  P+    NTL+ G CL G+V +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  SY+ LING CK  +  GA+ L  ++  +  KP+V +Y+T+   L +   V  A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++AD   Y T I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           CK G++K A  +   + +  +  DV+TY+ ++       ++ KA+ +F
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 154/312 (49%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+D   K      A  L  +++ + I P+++T N LI+ FC+         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++ +G  P+ V+ N ++  LC  G++ +A    + ++  G + N   Y TL++G C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCK 176

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +L   ++    K NV  YS +I+  CK + +  A  L+SEM  KGI  DVV 
Sbjct: 177 IGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+TL  G     +++ A  L +EM    +  + + Y   +D LCK G + EA  +   + 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+  Y+ L+DG      +K A  +F ++    +  DV TY I+I+  C +  +D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 358 KARDLFLDMEAK 369
           +A +LF +M  K
Sbjct: 357 EALNLFKEMHQK 368



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A   F  M+     P ++ FN I++   K      A  L   +   G++P+    N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC  G++     +   +   G   +  + + LI G C   +++ AL  + ++L++G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           + + V Y TL  G+ +I     A KL  ++       +   Y T ID LCK   + EA  
Sbjct: 161 QLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYG 220

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LF  + +     D+  Y+ LI G C  G+LK A  L   +    +  +V TYNI++ ALC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 352 ADGKMDKARDLFLDM 366
            +GK+ +A+ +   M
Sbjct: 281 KEGKVKEAKSVLAVM 295



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 114/224 (50%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A      M+ +   P    +N ++D F      + A  L   +E  G + ++ + +I
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN +C   +I    S+ +++L +G  PD V  NTL  GL    QV++A    D++   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +  +Y T I+G+CK G    A++L R +     + ++  Y+ +ID LCK   +  A+
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LF  +    + ADVVTY+ +I+  C +GK+ +A  L  +M  K
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 142/354 (40%), Positives = 212/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +  +Y TL+NGLC+ G T  AL L   + + +       +PN V Y TIIDGLCK+
Sbjct: 110 GFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRS------TRPNVVMYNTIIDGLCKD 163

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++A +L+ +M    I PNV+TY++LI+GFC A    EA  L  EM+ + + PNV ++
Sbjct: 164 KLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTY 223

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++M+ LCK GK+ EA  LL +M + GV+PN   YNTLMDG+CL G V  A+++F +M  
Sbjct: 224 TILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQ 283

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV+SY+I+I+  CK+K ++ A++L  E+L K + P+ V Y++L  G  ++ ++  
Sbjct: 284 KGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITS 343

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L  EM   G  AD   Y + +D LCKN  + +A  LF  ++    + +   Y  LID
Sbjct: 344 ALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALID 403

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GLCK GR K A +LF+ L       +V TYN+MI  LC +G +D+A  +   ME
Sbjct: 404 GLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKME 457



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 187/368 (50%), Gaps = 41/368 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PNV TY+TLI G C  G  + A  L  EM   N        PN  
Sbjct: 168 EAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKN------INPNVY 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D LCKEG V +AK L   M  E + PNVV+YN+L+ G+C   +   AK +F  M
Sbjct: 222 TYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTM 281

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV PNV S+N++++ LCK+ ++DEA  LL  ++   + PN   Y++L+DGFC  GR+
Sbjct: 282 VQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRI 341

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M   G   +V +Y+ L++  CKN+ ++ A +L+ +M  +GI+P+   Y  L
Sbjct: 342 TSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTAL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  + + A KLF  +   G   + W Y   I GLCK G + EA+ +         
Sbjct: 402 IDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAM--------- 452

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                          KS            +     I D VT+ I+I +L    + DKA  
Sbjct: 453 ---------------KS-----------KMEENGCIPDAVTFEIIIRSLFEKDQNDKAEK 486

Query: 362 LFLDMEAK 369
           L  +M AK
Sbjct: 487 LLHEMIAK 494



 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  +N ++  L +  H   A++LF++M     E      P+  T   +I+  C  G +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIE------PDLFTLNILINCFCHLGQM 61

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             +  +  K+      PN +T N+L+ G C   +  ++     +++ QG Q + VS+  +
Sbjct: 62  TFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATL 121

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LCK G+   A +LL ++     RPN  +YNT++DG C    VN A +L+  M++ G 
Sbjct: 122 LNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGI 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV +YS LI G+C   ++  A  L +EM+ K I P+V  Y  L   L +  +V+ A  
Sbjct: 182 FPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKN 241

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L   M + GV  +  +Y T +DG C  G +  A ++F T+       ++ +YN +ID LC
Sbjct: 242 LLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLC 301

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           KS R+  A  L R +    ++ + VTY+ +I   C  G++  A DL  +M
Sbjct: 302 KSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEM 351



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 157/311 (50%), Gaps = 45/311 (14%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L  ++ +    PNV+TY  L++ LC+ G    A NL   M     + GV  KPN 
Sbjct: 202 MEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT----KEGV--KPNV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV------------------------- 95
           V+Y T++DG C  G V  AK++F  M  + +NPNV                         
Sbjct: 256 VSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLRE 315

Query: 96  ----------VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                     VTY+SLI GFC       A  L  EM  +G   +VV++  +++ LCKN  
Sbjct: 316 VLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQN 375

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A+ L   M + G++PN + Y  L+DG C  GR   A++LF  +   GC+ NV++Y++
Sbjct: 376 LDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNV 435

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G CK   ++ AL++ S+M   G  PD V +  +   LFE  Q ++A KL  EM    
Sbjct: 436 MISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM---- 491

Query: 266 VAADTWAYRTF 276
           +A D   +R F
Sbjct: 492 IAKDLLRFRDF 502



 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 144/277 (51%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P ++ +N ++        +  A  LF +M  +G++P++ + N+++N  C  G+M  +  +
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  ++++G +PN    NTLM G CL G V ++      + + G + +  SY+ L+NG CK
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E   AL L   +  +  +P+VV+YNT+  GL +   V  A+ L+ EM   G+  +   
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T I G C  G ++EA  L   + +     ++  Y  L+D LCK G++K A  L   + 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  +  +VV+YN ++   C  G++  A+ +F  M  K
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQK 284



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 141/264 (53%), Gaps = 11/264 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G  PNV++YN +I+ LC++     A+NL  E+ + N        PNTVT
Sbjct: 274 AKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKN------MVPNTVT 327

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+++IDG CK G +  A +L  +M       +VVTY SL+   C   + ++A  LF++M 
Sbjct: 328 YSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMK 387

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+QPN  ++  +++ LCK G+   A +L + ++  G R N + YN ++ G C  G ++
Sbjct: 388 ERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLD 447

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   ME  GC  +  ++ I+I    +  + + A  L  EM++K    D++ +   F
Sbjct: 448 EALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK----DLLRFRD-F 502

Query: 243 IGLFEIHQVERAFKLFDEMQRHGV 266
            G    ++ ++A KL  EM   G+
Sbjct: 503 HGERSPNENDKAEKLLHEMIAKGL 526



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 107/211 (50%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+ +   P    +N ++           A  LF  M+  G + ++F+ +ILIN +C   +
Sbjct: 1   MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  + ++  ++L  G +P+ +  NTL  GL    +V+++    D++   G   D  +Y T
Sbjct: 61  MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            ++GLCK G    A++L R +       ++  YN +IDGLCK   +  A++L+  +    
Sbjct: 121 LLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  +V+TY+ +I+  C  G++ +A  L  +M
Sbjct: 181 IFPNVITYSTLIYGFCLAGQLMEAFGLLNEM 211



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 84/160 (52%), Gaps = 11/160 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ALFMK++  G +PN +TY  LI+GLC+ G    A  LF+ +          C+ N  
Sbjct: 378 KATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKG------CRINVW 431

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCKEG +D+A  +  KM++    P+ VT+  +I      +  ++A+ L  EM
Sbjct: 432 TYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEM 491

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
               +  +++ F     E   N + D+A +LL  MI  G+
Sbjct: 492 ----IAKDLLRFRDFHGERSPN-ENDKAEKLLHEMIAKGL 526


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 143/359 (39%), Positives = 208/359 (57%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G + +  +Y TL+NGLC+ G T  A+ L   + + +       +PN V Y TIID
Sbjct: 105 KVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRS------TRPNVVMYNTIID 158

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLCK+  V++A +L+ +M    I P+ +TY +LI+GFC       A  L  EM+ + + P
Sbjct: 159 GLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINP 218

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
            V  +N+++N LCK G + EA  LL +M + G++P    Y+TLMDG+CL G V  A+++F
Sbjct: 219 GVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIF 278

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            +M  MG   NV+SY+I+ING CK K ++ A++L  EML K + PD V YN+L  GL + 
Sbjct: 279 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 338

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A  L +EM   G  AD   Y + +D LCKN  + +A  LF  ++    +  +  Y
Sbjct: 339 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 398

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             LIDGLCK GRLK A ELF+ L       DV TY +MI  LC +G  D+A  +   ME
Sbjct: 399 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKME 457



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/354 (35%), Positives = 189/354 (53%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PNV  YNT+I+GLC+      A +L+ EM +  G F     P+ +TYTT+I G C  G 
Sbjct: 147 RPNVVMYNTIIDGLCKDKLVNEAYDLYSEM-DARGIF-----PDAITYTTLIYGFCLLGQ 200

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A  L  +M  +NINP V  YN LI+  C   +  EAK L   M  +G++P VV+++ 
Sbjct: 201 LMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYST 260

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +M+  C  G++  A ++   M+Q+GV PN + YN +++G C   RV+ A  L   M    
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 320

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +  +Y+ LI+G CK+  I  AL+L +EM  +G   DVV Y +L   L +   +++A 
Sbjct: 321 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 380

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF +M+  G+    + Y   IDGLCK G +  A ELF+ L +    +D+  Y  +I GL
Sbjct: 381 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 440

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G    A  +   +     I + VT+ I+I +L    + DKA  L  +M AK
Sbjct: 441 CKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 494



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 185/361 (51%), Gaps = 6/361 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G +P+  T NTL+ GLC  G    +L+  +++     +       + V+Y T+++
Sbjct: 70  KILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQM------DHVSYGTLLN 123

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLCK G    A +L   ++D +  PNVV YN++I G C     NEA  L+ EM  +G+ P
Sbjct: 124 GLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           + +++  ++   C  G++  A  LL+ MI   + P  ++YN L++  C  G V  A+ L 
Sbjct: 184 DAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G K  V +YS L++GYC   E++ A  ++  M+  G+ P+V  YN +  GL + 
Sbjct: 244 AVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKC 303

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +V+ A  L  EM    +  DT  Y + IDGLCK+G I  A+ L   +       D+  Y
Sbjct: 304 KRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTY 363

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             L+D LCK+  L  A  LF  +    +   + TY  +I  LC  G++  A++LF  +  
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLV 423

Query: 369 K 369
           K
Sbjct: 424 K 424



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A +L  ++ V G   N  T N LIN  C  G    + ++  ++     + G   +P+T
Sbjct: 27  LTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKIL----KLGY--QPDT 80

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T  T++ GLC +G V K+     K+  +    + V+Y +L++G C   +   A  L   
Sbjct: 81  ITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRM 140

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + D+  +PNVV +N I++ LCK+  ++EA  L   M   G+ P+A  Y TL+ GFCL G+
Sbjct: 141 IEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQ 200

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  L   M        V+ Y+ILIN  CK   ++ A +L + M  +GIKP VV Y+T
Sbjct: 201 LMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYST 260

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   + +V+ A ++F  M + GV  + ++Y   I+GLCK   + EA+ L R +    
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 320

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   YN LIDGLCKSGR+  A  L   +      ADVVTY  ++ ALC +  +DKA 
Sbjct: 321 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 380

Query: 361 DLFLDMEAK 369
            LF+ M+ +
Sbjct: 381 ALFMKMKER 389



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 146/265 (55%), Gaps = 6/265 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G +P V TY+TL++G C  G    A  +F  M     + GV   PN  
Sbjct: 238 EAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV----QMGV--NPNVY 291

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I+GLCK   VD+A  L  +M  +N+ P+ VTYNSLI G C +     A  L  EM
Sbjct: 292 SYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM 351

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G   +VV++  +++ LCKN  +D+A+ L   M + G++P  + Y  L+DG C  GR+
Sbjct: 352 HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRL 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ELF  +   GC  +V++Y+++I+G CK    + AL++ S+M   G  P+ V +  +
Sbjct: 412 KNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEII 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
              LFE  + ++A KL  EM   G+
Sbjct: 472 IRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 159/312 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+  L K      A  L  +M+ + I  N VT N LI+ FC+      +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+ ++ N +M  LC  G++ ++    + ++  G + +   Y TL++G C 
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +L   +E    + NV  Y+ +I+G CK+K +  A  LYSEM ++GI PD + 
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G   + Q+  AF L DEM    +    + Y   I+ LCK G + EA  L   + 
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +  +  Y+ L+DG C  G ++ A ++F ++ +  +  +V +YNIMI+ LC   ++D
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307

Query: 358 KARDLFLDMEAK 369
           +A +L  +M  K
Sbjct: 308 EAMNLLREMLHK 319



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 102/211 (48%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+ +   P    +N ++       +   A  L   ME  G + N  + +ILIN +C   +
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  + S+  ++L  G +PD +  NTL  GL    +V+++    D++   G   D  +Y T
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            ++GLCK G    AV+L R +       ++  YN +IDGLCK   +  A++L+  +    
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARG 180

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  D +TY  +I+  C  G++  A  L  +M
Sbjct: 181 IFPDAITYTTLIYGFCLLGQLMGAFSLLDEM 211


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 141/368 (38%), Positives = 223/368 (60%), Gaps = 7/368 (1%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A LF  K+   G   +  +Y TLI+GLC+ G T  AL+L + + +GN     + +PN
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV-DGN-----LVQPN 224

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y TIID +CK   V++A +LF +M  + I+P+VVTY++LI GFC      +A  LF 
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFN 284

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+ + ++P+V +FN+++N  CK+GKM E   + ++M++ G++PN   YN+LMDG+CL  
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            VN+A+ +F +M   G   ++ SYSI+ING+CK K+ + A++L+ EM  K I PDVV Y+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  GL +  ++  A +L D+M   GV  +   Y + +D LCK   + +A+ L    +  
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++ DI  Y+ LI GLC+SG+L+ A ++F  L       DV  Y IMI   C +G  ++A
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEA 524

Query: 360 RDLFLDME 367
             L   ME
Sbjct: 525 LALLSKME 532



 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 192/368 (52%), Gaps = 8/368 (2%)

Query: 4   AALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           AAL +  RV G   +PNV  YNT+I+ +C+      A +LF EM +          P+ V
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKG------ISPDVV 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I G C  G +  A +LF KM  ENI P+V T+N L++ FC      E K +F  M
Sbjct: 262 TYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M QG++PN V++N +M+  C   ++++A  +   M Q GV P+   Y+ +++GFC   + 
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M       +V +YS LI+G  K+  I  AL L  +M  +G+ P++  YN++
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L + HQV++A  L  + +  G   D   Y   I GLC++G + +A ++F  L +  Y
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGY 501

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD+ AY  +I G C  G    A  L   +     I D  TY I+I +L    + D A  
Sbjct: 502 NLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561

Query: 362 LFLDMEAK 369
           L  +M A+
Sbjct: 562 LLREMIAR 569



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++F K+   G  P+  T+ TL  GLC  G    A    +++      F      + ++
Sbjct: 139 AFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHF------DQIS 192

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I GLCK G    A +L  ++    + PNVV YN++I   C     NEA  LF EM+
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMV 252

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+VV+++ +++  C  GK+ +A  L   MI   ++P+ + +N L++ FC  G++ 
Sbjct: 253 SKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMK 312

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             + +F  M   G K N  +Y+ L++GYC  KE+  A S+++ M   G+ PD+  Y+ + 
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMI 372

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +I + + A  LF EM R  +  D   Y + IDGL K+G I  A++L   +      
Sbjct: 373 NGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVP 432

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +I  YN ++D LCK+ ++  A  L           D+ TY+I+I  LC  GK++ AR +
Sbjct: 433 PNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKV 492

Query: 363 FLDMEAK 369
           F D+  K
Sbjct: 493 FEDLLVK 499



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 187/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF +L      P  F +N ++  L ++ H    L L ++M     EF  + KPN V
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKM-----EFRGI-KPNLV 121

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
               +I+  C+ G +  A  +F K+      P+ +T+ +L  G C      +A     ++
Sbjct: 122 NCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKV 181

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G   + +S+  +++ LCK G+   A  LL+ +    V+PN  +YNT++D  C    V
Sbjct: 182 VALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLV 241

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A +LF  M S G   +V +YS LI+G+C   +++ A+ L+++M+ + IKPDV  +N L
Sbjct: 242 NEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNIL 301

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +  +++    +FD M + G+  +   Y + +DG C    + +A  +F T+     
Sbjct: 302 VNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGV 361

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI++Y+ +I+G CK  +   A  LF+ + R  +I DVVTY+ +I  L   G++  A  
Sbjct: 362 NPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQ 421

Query: 362 LFLDMEAK 369
           L   M  +
Sbjct: 422 LVDQMHDR 429



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 146/270 (54%), Gaps = 6/270 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   +F  +   G +PN  TYN+L++G C       A ++F  MA G    GV   P+  
Sbjct: 313 EGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQG----GV--NPDIQ 366

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ +I+G CK    D+A  LF +M  +NI P+VVTY+SLI G   +   + A  L  +M
Sbjct: 367 SYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+GV PN+ ++N I++ LCK  ++D+A  LL      G +P+   Y+ L+ G C +G++
Sbjct: 427 HDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKL 486

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  +   G   +V++Y+I+I G+C       AL+L S+M   G  PD   Y  +
Sbjct: 487 EDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEII 546

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            + LF+  + + A KL  EM   G+  + +
Sbjct: 547 ILSLFKKDENDMAEKLLREMIARGLPLNFY 576



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 157/310 (50%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           K N ++Y++          VD A  LF ++   N  P    +N ++     +  ++    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +M  +G++PN+V+ N+++N  C+ G +  A  +   ++++G  P+   + TL  G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLC 166

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           L G++ +A      + ++G   +  SY  LI+G CK  E   AL L   +    ++P+VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +YNT+   + ++  V  AF LF EM   G++ D   Y   I G C  G + +A++LF  +
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKM 286

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +   + D+  +N L++  CK G++K    +F  + +  +  + VTYN ++   C   ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 357 DKARDLFLDM 366
           +KA+ +F  M
Sbjct: 347 NKAKSIFNTM 356



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 97/206 (47%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N   Y++    F     V+ A  LF  +         F ++ ++    K+K     L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M  +GIKP++V  N L     ++  +  AF +F ++ + G   DT  + T   GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G I +A      +  L +  D  +Y  LI GLCK G  + A +L + +   ++  +VV Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
           N +I ++C    +++A DLF +M +K
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSK 254


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 214/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G +PN  TY  ++  +C++G T +A+ L  +M           K + V
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK------IKLDAV 248

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ IIDGLCK+G +D A  LF +M+ +    +++ Y +LI GFCYA  W++   L  +M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+VV+F+ +++   K GK+ EA  L + MIQ G+ P+   Y +L+DGFC   ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  +   M S GC  N+ +++ILINGYCK   I+  L L+ +M  +G+  D V YNTL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  E+ ++E A +LF EM    V  D  +Y+  +DGLC NG   +A+E+F  +   K 
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           ELDI  YN +I G+C + ++  AW+LF SLP   +  DV TYNIMI  LC  G + +A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 362 LFLDME 367
           LF  ME
Sbjct: 549 LFRKME 554



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 194/361 (53%), Gaps = 6/361 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++ + G   N++T + +IN  CR     +A +   ++     E      P+TVT++T+I+
Sbjct: 97  QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYE------PDTVTFSTLIN 150

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC EG V +A EL  +M +    P ++T N+L++G C     ++A  L   M++ G QP
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N V++  ++  +CK+G+   A  LL  M +  ++ +A  Y+ ++DG C  G ++ A  LF
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ME  G K ++  Y+ LI G+C     +    L  +M+ + I PDVV ++ L     + 
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A +L  EM + G++ DT  Y + IDG CK   + +A  +   +       +IR +
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N LI+G CK+  +    ELFR +    ++AD VTYN +I   C  GK++ A++LF +M +
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450

Query: 369 K 369
           +
Sbjct: 451 R 451



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/309 (30%), Positives = 162/309 (52%), Gaps = 7/309 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  ++ LI+   + G    A  L +EM     + G+   P+TVTYT++IDG CKE  +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMI----QRGI--SPDTVTYTSLIDGFCKENQL 368

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKA  +   M  +   PN+ T+N LI+G+C AN  ++   LF +M  +GV  + V++N +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C+ GK++ A  L + M+   VRP+   Y  L+DG C  G   +A E+F  +E    
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + ++  Y+I+I+G C   +++ A  L+  +  KG+KPDV  YN +  GL +   +  A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF +M+  G + +   Y   I      G   ++ +L   ++   + +D      ++D L 
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML- 607

Query: 317 KSGRLKIAW 325
             GRLK ++
Sbjct: 608 SDGRLKKSF 616



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 168/332 (50%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF+EM           +P  + ++ +   + +    D   +L  +M+ + I  N+ T
Sbjct: 56  AVDLFQEMTRSRP------RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            + +I+  C     + A     +++  G +P+ V+F+ ++N LC  G++ EA  L++ M+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P     N L++G CL G+V+ A  L   M   G + N  +Y  ++   CK+ +  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ L  +M  + IK D V Y+ +  GL +   ++ AF LF+EM+  G  AD   Y T I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            G C  G   +  +L R +   K   D+ A++ LID   K G+L+ A EL + + +  + 
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            D VTY  +I   C + ++DKA  +   M +K
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 146/290 (50%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A +LF +M      P ++ ++ L         ++    L  +M  +G+  N+ + +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  C+  K+  A   +  +I++G  P+   ++TL++G CL GRV+ A EL   M  MG 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K  + + + L+NG C N ++  A+ L   M+  G +P+ V Y  +   + +  Q   A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M+   +  D   Y   IDGLCK+G +  A  LF  + I  ++ DI  Y  LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +GR     +L R + +  +  DVV ++ +I     +GK+ +A +L  +M
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 113/225 (50%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K D+A  L + M +   RP    ++ L      T + +   +L   ME  G  HN+++ S
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN  C+ +++  A S   +++  G +PD V ++TL  GL    +V  A +L D M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G           ++GLC NG + +AV L   +    ++ +   Y  ++  +CKSG+  +A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            EL R +    +  D V Y+I+I  LC DG +D A +LF +ME K
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/365 (35%), Positives = 217/365 (59%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T  +L+NG CR      A++L ++M     E G   KP+ V 
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVA 192

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  IID LCK   V+ A + F +++ + I PNVVTY +L++G C ++ W++A  L  +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV++++ +++   KNGK+ EA  L E M+++ + P+   Y++L++G CL  R++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F  M S GC  +V SY+ LING+CK K +E  + L+ EM  +G+  + V YNTL 
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V++A + F +M   G++ D W Y   + GLC NG + +A+ +F  ++  + +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LDI  Y  +I G+CK+G+++ AW LF SL    L  D+VTY  M+  LC  G + +   L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492

Query: 363 FLDME 367
           +  M+
Sbjct: 493 YTKMK 497



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 180/332 (54%), Gaps = 6/332 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  K+   G +P++  YN +I+ LC+T     A + F+E+           +PN V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------IRPNVV 226

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++GLC       A  L   M  + I PNV+TY++L+  F       EAK LF EM
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P++V+++ ++N LC + ++DEA+++ +LM+  G   +   YNTL++GFC   RV
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M   G   N  +Y+ LI G+ +  +++ A   +S+M   GI PD+  YN L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E+A  +F++MQ+  +  D   Y T I G+CK G + EA  LF +L +   
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
           + DI  Y  ++ GLC  G L     L+  + +
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 175/330 (53%), Gaps = 6/330 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF +M            P+ V +  ++  + K    D    L  KM+   I  ++ T
Sbjct: 69  AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N +I+ FC     + A  +  +M+  G +P+ V+   ++N  C+  ++ +A  L++ M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +IG +P+   YN ++D  C T RVN A + F  +E  G + NV +Y+ L+NG C +    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L S+M+ K I P+V+ Y+ L     +  +V  A +LF+EM R  +  D   Y + I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC +  I EA ++F  +       D+ +YN LI+G CK+ R++   +LFR + +  L+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ++ VTYN +I      G +DKA++ F  M+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 151/294 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A +LF  M      P++V +N L+        ++    L  +M   G++ ++ +FN+
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  M+++G  P+     +L++GFC   RV+ A  L   M  +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K ++ +Y+ +I+  CK K +  A   + E+  KGI+P+VV Y  L  GL    +   A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M +  +  +   Y   +D   KNG ++EA ELF  +  +  + DI  Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C   R+  A ++F  +     +ADVV+YN +I+  C   +++    LF +M  +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++     +P++ TY++LINGLC       A  +F+ M +        C  + 
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CLADV 330

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+I+G CK   V+   +LF +M    +  N VTYN+LI GF  A D ++A+  F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P++ ++N+++  LC NG++++A  + E M +  +  +   Y T++ G C TG+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           V  A  LF S+   G K ++ +Y+ +++G C    +    +LY++M  +G+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 114/222 (51%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+++A  L   M++    P+   +N L+       + +    L   ME +G ++++++++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C   ++  ALS+  +ML  G +PD V   +L  G    ++V  A  L D+M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D  AY   ID LCK   + +A + F+ +       ++  Y  L++GLC S R   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             L   + +  +  +V+TY+ ++ A   +GK+ +A++LF +M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 94/190 (49%)

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+ D+  +N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +        QV  A  +  +M + G   D     + ++G C+   + +AV L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            Y+ DI AYN +ID LCK+ R+  A++ F+ + R  +  +VVTY  +++ LC   +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 360 RDLFLDMEAK 369
             L  DM  K
Sbjct: 245 ARLLSDMIKK 254


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 135/363 (37%), Positives = 217/363 (59%), Gaps = 6/363 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL  ++   GC+P++ TY  ++NGLC+ G T +A NL  +M  G  E      P  + Y 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVLIYN 55

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           TIIDGLCK   +D A  LF +M+ + I PNVVTY+SLI   C    W++A  L  +M+++
Sbjct: 56  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 115

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P+V +F+ +++   K GK+ EA +L + M++  + P+   Y++L++GFC+  R++ A
Sbjct: 116 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 175

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +++F  M S  C  +V +Y+ LI G+CK K +E  + ++ EM  +G+  + V YN L  G
Sbjct: 176 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 235

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           LF+    + A ++F EM   GV  +   Y T +DGLCKNG + +A+ +F  L+  K E  
Sbjct: 236 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 295

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  YN +I+G+CK+G+++  W+LF +L    +  DVV YN MI   C  G  ++A  LF 
Sbjct: 296 IYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFK 355

Query: 365 DME 367
           +M+
Sbjct: 356 EMK 358



 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 115/314 (36%), Positives = 182/314 (57%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P+ VTY  +++GLCK G  D A  L  KM+   + P V+ YN++I G C     ++A 
Sbjct: 12  CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 71

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM  +G++PNVV+++ +++ LC  G+  +ASRLL  MI+  + P+ F ++ L+D F
Sbjct: 72  NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 131

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
              G++  AE+L+  M       ++ +YS LING+C +  ++ A  ++  M+SK   PDV
Sbjct: 132 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 191

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V YNTL  G  +  +VE   ++F EM + G+  +T  Y   I GL + G    A E+F+ 
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +       +I  YN L+DGLCK+G+L+ A  +F  L R  +   + TYNIMI  +C  GK
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311

Query: 356 MDKARDLFLDMEAK 369
           ++   DLF ++  K
Sbjct: 312 VEDGWDLFCNLSLK 325



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 192/365 (52%), Gaps = 10/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  PNV TY++LI+ LC  G    A  L  +M            P+  
Sbjct: 69  DALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK------INPDVF 122

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +ID   KEG + +A++L+ +M   +I+P++VTY+SLI+GFC  +  +EAK +F  M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P+VV++N ++   CK  +++E   +   M Q G+  N   YN L+ G    G  
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+E+F  M S G   N+ +Y+ L++G CKN ++E A+ ++  +    ++P +  YN +
Sbjct: 243 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +  +VE  + LF  +   GV  D  AY T I G C+ G   EA  LF+ ++    
Sbjct: 303 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGT 362

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN LI    + G  + + EL + +       D  T  ++ + L  DG++DK+  
Sbjct: 363 LPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS-- 419

Query: 362 LFLDM 366
            FLDM
Sbjct: 420 -FLDM 423



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 148/270 (54%), Gaps = 6/270 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++     +P++ TY++LING C       A  +FE M + +      C P+ 
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 191

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V++  E+F +M    +  N VTYN LI G   A D + A+ +F E
Sbjct: 192 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 251

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++++N +++ LCKNGK+++A  + E + +  + P  + YN +++G C  G+
Sbjct: 252 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 311

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF ++   G K +V +Y+ +I+G+C+    E A +L+ EM   G  P+   YNT
Sbjct: 312 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 371

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           L          E + +L  EM+  G A D 
Sbjct: 372 LIRARLRDGDREASAELIKEMRSCGFAGDA 401



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 112/218 (51%)

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L++ M+  G +P+   Y  +++G C  G  + A  L   ME    +  V  Y+ +I+G C
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K K ++ AL+L+ EM +KGI+P+VV Y++L   L    +   A +L  +M    +  D +
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            +   ID   K G +VEA +L+  +     +  I  Y+ LI+G C   RL  A ++F  +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                  DVVTYN +I   C   ++++  ++F +M  +
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 220



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 77/147 (52%)

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           ++L   M++KG +PD+V Y  +  GL +    + AF L ++M++  +      Y T IDG
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           LCK  ++ +A+ LF+ +       ++  Y+ LI  LC  GR   A  L   +    +  D
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           V T++ +I A   +GK+ +A  L+ +M
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEM 147


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 131/365 (35%), Positives = 217/365 (59%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T  +L+NG CR      A++L ++M     E G   KP+ V 
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVA 192

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  IID LCK   V+ A + F +++ + I PNVVTY +L++G C ++ W++A  L  +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV++++ +++   KNGK+ EA  L E M+++ + P+   Y++L++G CL  R++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRID 312

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F  M S GC  +V SY+ LING+CK K +E  + L+ EM  +G+  + V YNTL 
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V++A + F +M   G++ D W Y   + GLC NG + +A+ +F  ++  + +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LDI  Y  +I G+CK+G+++ AW LF SL    L  D+VTY  M+  LC  G + +   L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492

Query: 363 FLDME 367
           +  M+
Sbjct: 493 YTKMK 497



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 196/365 (53%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L  K+ V G   +++T+N +IN  C      +AL++  +M     E      P+ VT  
Sbjct: 106 SLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYE------PDRVTIG 159

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++++G C+   V  A  L  KM +    P++V YN++I   C     N+A   F E+  +
Sbjct: 160 SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERK 219

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++PNVV++  ++N LC + +  +A+RLL  MI+  + PN   Y+ L+D F   G+V  A
Sbjct: 220 GIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEA 279

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +ELF  M  M    ++ +YS L+NG C +  I+ A  ++  M+SKG   DVV YNTL  G
Sbjct: 280 KELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLING 339

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  +VE   KLF EM + G+ ++T  Y T I G  + G + +A E F  +       D
Sbjct: 340 FCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPD 399

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  YN L+ GLC +G L+ A  +F  + +  +  D+VTY  +I  +C  GK+++A  LF 
Sbjct: 400 IWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFC 459

Query: 365 DMEAK 369
            +  K
Sbjct: 460 SLSLK 464



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 180/332 (54%), Gaps = 6/332 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  K+   G +P++  YN +I+ LC+T     A + F+E+           +PN V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------IRPNVV 226

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++GLC       A  L   M  + I PNV+TY++L+  F       EAK LF EM
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P++V+++ ++N LC + ++DEA+++ +LM+  G   +   YNTL++GFC   RV
Sbjct: 287 VRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M   G   N  +Y+ LI G+ +  +++ A   +S+M   GI PD+  YN L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E+A  +F++MQ+  +  D   Y T I G+CK G + EA  LF +L +   
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
           + DI  Y  ++ GLC  G L     L+  + +
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 175/330 (53%), Gaps = 6/330 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF +M            P+ V +  ++  + K    D    L  KM+   I  ++ T
Sbjct: 69  AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N +I+ FC     + A  +  +M+  G +P+ V+   ++N  C+  ++ +A  L++ M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +IG +P+   YN ++D  C T RVN A + F  +E  G + NV +Y+ L+NG C +    
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L S+M+ K I P+V+ Y+ L     +  +V  A +LF+EM R  +  D   Y + +
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLV 302

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC +  I EA ++F  +       D+ +YN LI+G CK+ R++   +LFR + +  L+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ++ VTYN +I      G +DKA++ F  M+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 151/294 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A +LF  M      P++V +N L+        ++    L  +M   G++ ++ +FN+
Sbjct: 66  LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  M+++G  P+     +L++GFC   RV+ A  L   M  +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K ++ +Y+ +I+  CK K +  A   + E+  KGI+P+VV Y  L  GL    +   A 
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M +  +  +   Y   +D   KNG ++EA ELF  +  +  + DI  Y+ L++GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGL 305

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C   R+  A ++F  +     +ADVV+YN +I+  C   +++    LF +M  +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 129/231 (55%), Gaps = 6/231 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++     +P++ TY++L+NGLC       A  +F+ M +        C  + 
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKG------CLADV 330

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+I+G CK   V+   +LF +M    +  N VTYN+LI GF  A D ++A+  F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P++ ++N+++  LC NG++++A  + E M +  +  +   Y T++ G C TG+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           V  A  LF S+   G K ++ +Y+ +++G C    +    +LY++M  +G+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 114/222 (51%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+++A  L   M++    P+   +N L+       + +    L   ME +G ++++++++
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C   ++  ALS+  +ML  G +PD V   +L  G    ++V  A  L D+M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D  AY   ID LCK   + +A + F+ +       ++  Y  L++GLC S R   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             L   + +  +  +V+TY+ ++ A   +GK+ +A++LF +M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 94/190 (49%)

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++N A +LF  M       ++  ++ L++   K K+ +  +SL  +M   GI+ D+  +N
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +        QV  A  +  +M + G   D     + ++G C+   + +AV L   +  +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            Y+ DI AYN +ID LCK+ R+  A++ F+ + R  +  +VVTY  +++ LC   +   A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244

Query: 360 RDLFLDMEAK 369
             L  DM  K
Sbjct: 245 ARLLSDMIKK 254


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 139/366 (37%), Positives = 214/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G +PN  TY  ++  +C++G T +A+ L  +M           K + V
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK------IKLDAV 248

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ IIDGLCK+G +D A  LF +M+ +    +++ Y +LI GFCYA  W++   L  +M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+VV+F+ +++   K GK+ EA  L + MIQ G+ P+   Y +L+DGFC   ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  +   M S GC  N+ +++ILINGYCK   I+  L L+ +M  +G+  D V YNTL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  E+ ++E A +LF EM    V  D  +Y+  +DGLC NG   +A+E+F  +   K 
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           ELDI  YN +I G+C + ++  AW+LF SLP   +  DV TYNIMI  LC  G + +A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 362 LFLDME 367
           LF  ME
Sbjct: 549 LFRKME 554



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 194/361 (53%), Gaps = 6/361 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++ + G   N++T + +IN  CR     +A +   ++     E      P+TVT++T+I+
Sbjct: 97  QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYE------PDTVTFSTLIN 150

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC EG V +A EL  +M +    P ++T N+L++G C     ++A  L   M++ G QP
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N V++  ++  +CK+G+   A  LL  M +  ++ +A  Y+ ++DG C  G ++ A  LF
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ME  G K ++  Y+ LI G+C     +    L  +M+ + I PDVV ++ L     + 
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A +L  EM + G++ DT  Y + IDG CK   + +A  +   +       +IR +
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N LI+G CK+  +    ELFR +    ++AD VTYN +I   C  GK++ A++LF +M +
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450

Query: 369 K 369
           +
Sbjct: 451 R 451



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 182/358 (50%), Gaps = 30/358 (8%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  ++ LI+   + G    A  L +EM     + G+   P+TVTYT++IDG CKE  +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMI----QRGI--SPDTVTYTSLIDGFCKENQL 368

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKA  +   M  +   PN+ T+N LI+G+C AN  ++   LF +M  +GV  + V++N +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C+ GK++ A  L + M+   VRP+   Y  L+DG C  G   +A E+F  +E    
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + ++  Y+I+I+G C   +++ A  L+  +  KG+KPDV  YN +  GL +   +  A  
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548

Query: 257 LFDEMQRHGVAADTWAYR----------------TFIDGLCKNGYIVEAVELFRTL---- 296
           LF +M+  G + +   Y                   I+ + + G+ V+A  L   L    
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLA 608

Query: 297 RILK--YELDIRAYNCLIDGLC--KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           R+LK  +E D+  +  L+   C  ++  +  A  LF+++       +VVTYN +I  L
Sbjct: 609 RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGL 666



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 154/315 (48%), Gaps = 30/315 (9%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF K+ + G   +  TYNTLI G C  G   VA  LF+EM +         +P+ V+Y  
Sbjct: 409 LFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR------VRPDIVSYKI 462

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++DGLC  G  +KA E+F K++   +  ++  YN +IHG C A+  ++A  LF  +  +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+P+V ++N+++  LCK G + EA  L   M + G  PN   YN L+      G   ++ 
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582

Query: 186 EL----------------------FVSMESMGCKHNVFSYSILINGYC--KNKEIEGALS 221
           +L                         M   G + +VF+++ L+  +C  +N  +  A +
Sbjct: 583 KLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPT 642

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L+  M + G KP+VV YNT+  GL   + + +   + D+M   G   +     TFI GLC
Sbjct: 643 LFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC 702

Query: 282 KNGYIVEAVELFRTL 296
           K      A+ L R +
Sbjct: 703 KQDLHGSAILLLRKM 717



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 168/332 (50%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF+EM           +P  + ++ +   + +    D   +L  +M+ + I  N+ T
Sbjct: 56  AVDLFQEMTRSRP------RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            + +I+  C     + A     +++  G +P+ V+F+ ++N LC  G++ EA  L++ M+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G +P     N L++G CL G+V+ A  L   M   G + N  +Y  ++   CK+ +  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ L  +M  + IK D V Y+ +  GL +   ++ AF LF+EM+  G  AD   Y T I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            G C  G   +  +L R +   K   D+ A++ LID   K G+L+ A EL + + +  + 
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            D VTY  +I   C + ++DKA  +   M +K
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 146/290 (50%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A +LF +M      P ++ ++ L         ++    L  +M  +G+  N+ + +++
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  C+  K+  A   +  +I++G  P+   ++TL++G CL GRV+ A EL   M  MG 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K  + + + L+NG C N ++  A+ L   M+  G +P+ V Y  +   + +  Q   A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M+   +  D   Y   IDGLCK+G +  A  LF  + I  ++ DI  Y  LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +GR     +L R + +  +  DVV ++ +I     +GK+ +A +L  +M
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 113/225 (50%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K D+A  L + M +   RP    ++ L      T + +   +L   ME  G  HN+++ S
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN  C+ +++  A S   +++  G +PD V ++TL  GL    +V  A +L D M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G           ++GLC NG + +AV L   +    ++ +   Y  ++  +CKSG+  +A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            EL R +    +  D V Y+I+I  LC DG +D A +LF +ME K
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 74/173 (42%), Gaps = 18/173 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------GNGEFGV 54
           EA  LF K+   G  PN  TYN LI      G    +  L EE+             F +
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFAL 604

Query: 55  VC---------KPNTVTYTTIIDGLCKE--GFVDKAKELFLKMKDENINPNVVTYNSLIH 103
                      +P+  T+TT++   C E    V  A  LF  MK     PNVVTYN++I 
Sbjct: 605 STLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIK 664

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           G    N  ++   +  +M ++G QPN V+ +  ++ LCK      A  LL  M
Sbjct: 665 GLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 51/103 (49%), Gaps = 9/103 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  ++  G +PNV TYNT+I GL           + ++M      F   C+PN V
Sbjct: 639 DAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQM------FERGCQPNAV 692

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS-LIH 103
           T +T I GLCK+     A  L  KM  EN N +V T    LIH
Sbjct: 693 TKSTFISGLCKQDLHGSAILLLRKM--ENDNEDVTTKKKILIH 733


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/366 (39%), Positives = 219/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA      +   G   +  +Y TLINGLC+ G T  AL + +++       G +   + V
Sbjct: 147 EALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIE------GKLVNTDVV 200

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  II+ LCK+  V  A +L+ +M  + I+P+VVT+NSLI GFC      EA  LF EM
Sbjct: 201 MYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEM 260

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+V +F+++++ LCK+G +  A  +L +M++ GV P+   Y++LMDG+CL   V
Sbjct: 261 VLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEV 320

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A+ +F +M  +G   +  SY+I+ING  K K ++ ALSL+ EM  KGI PD V YN+L
Sbjct: 321 NKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSL 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ ++  A++L DEM  +G+ AD   Y + ID LCKN +I +A+ L + ++    
Sbjct: 381 IDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGI 440

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  YN LIDGLCK GRLK A ++F+ L       +  TYNIMI+ LC +G  ++A  
Sbjct: 441 QPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEV 500

Query: 362 LFLDME 367
           L   ME
Sbjct: 501 LLSKME 506



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 181/337 (53%), Gaps = 7/337 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++      P+V T+N+LI G C  G    A  LF EM   N        P+  
Sbjct: 217 DAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN------INPDVY 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ ++D LCK+G + +AK +   M  + + P+VVTY+SL+ G+C  N+ N+AK +F  M
Sbjct: 271 TFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+  S+N+++N L K   +DEA  L + M   G+ P+   YN+L+DG C  GR+
Sbjct: 331 SRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRI 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M + G   ++ +Y+ LI+  CKN  I+ A++L  ++  +GI+P +  YN L
Sbjct: 391 SYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A  +F ++   G + + W Y   I+GLCK G   EA  L   +     
Sbjct: 451 IDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGI 510

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLI 337
             D   Y  +I  L +    + A +L R +  RG+L+
Sbjct: 511 IPDAVTYETIIRALFRKDENEKAEKLLREMIIRGLLL 547



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 169/341 (49%), Gaps = 13/341 (3%)

Query: 26  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLK 85
           +N    + H ++ +     +   N   G + K N   YTT I              L  +
Sbjct: 38  VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAI-------------SLSHQ 84

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           ++ + I P +VT+N L++ +C+  +   A  +F +++  G  P  ++FN ++N +C NGK
Sbjct: 85  LELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGK 144

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           + EA    + +I +G   +   Y TL++G C  G    A ++   +E      +V  Y+I
Sbjct: 145 LKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNI 204

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +IN  CK+K +  A  LYSEM++K I PDVV +N+L +G   + Q++ AF LF EM    
Sbjct: 205 IINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKN 264

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D + +   +D LCK+G I  A  +   +       D+  Y+ L+DG C    +  A 
Sbjct: 265 INPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAK 324

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +F ++ R  +     +YNIMI+ L     +D+A  LF +M
Sbjct: 325 HVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEM 365



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 185/380 (48%), Gaps = 43/380 (11%)

Query: 17  PNVFTYNTLINGLCRTG--HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           P++  +N ++  + +    H   A++L  ++     E   +  P  VT+  +++  C  G
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQL-----ELKGI-TPTIVTFNILVNCYCHLG 108

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG--------- 125
            +  A  +F K+     +P  +T+N+LI+G C      EA      ++  G         
Sbjct: 109 EMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYR 168

Query: 126 --------------------------VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
                                     V  +VV +N+I+N LCK+  + +A +L   MI  
Sbjct: 169 TLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITK 228

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
            + P+   +N+L+ GFC+ G++  A  LF  M       +V+++SIL++  CK+  I  A
Sbjct: 229 RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRA 288

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
            ++ + M+ +G+ PDVV Y++L  G   +++V +A  +F  M R GVA    +Y   I+G
Sbjct: 289 KNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMING 348

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           L K   + EA+ LF+ +       D   YN LIDGLCK GR+  AW+L   +    + AD
Sbjct: 349 LGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPAD 408

Query: 340 VVTYNIMIHALCADGKMDKA 359
           ++TYN +I  LC +  +DKA
Sbjct: 409 ILTYNSLIDVLCKNHHIDKA 428



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 137/281 (48%), Gaps = 5/281 (1%)

Query: 91  INPNVVTYNSLIHGFC-YANDW--NEAKCLFIEMMDQGVQPNVVSFNVIMNELCK--NGK 145
           I P   ++   +H F   +ND+  N     F  M+     P++V FN I+  + K  N  
Sbjct: 15  IPPFRASFCHYLHPFIPKSNDFDVNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNH 74

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
              A  L   +   G+ P    +N L++ +C  G +  A  +F  +  +G      +++ 
Sbjct: 75  YTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNT 134

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING C N +++ AL  +  +++ G   D V Y TL  GL +I +   A ++  +++   
Sbjct: 135 LINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKL 194

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V  D   Y   I+ LCK+  + +A +L+  +   +   D+  +N LI G C  G+LK A+
Sbjct: 195 VNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAF 254

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LF  +    +  DV T++I++ ALC DG + +A+++   M
Sbjct: 255 GLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVM 295


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  268 bits (686), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 142/359 (39%), Positives = 216/359 (60%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           KL   G + N  +Y TLING+C+ G T  A+ L +++       G + KPN V Y+TIID
Sbjct: 154 KLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID------GRLTKPNVVMYSTIID 207

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK   V +A  LF +M  + I+ +VVTY++LI+GFC      EA  L  EM+ + + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINP 267

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NV ++N++++ LCK GK+ EA  +L +M++  V+P+   Y+TLMDG+ L   V +A+ +F
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            +M  MG   +V +Y+ILING+CKNK ++ AL+L+ EM  K + P +V Y++L  GL + 
Sbjct: 328 NAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++   + L DEM   G  A+   Y + IDGLCKNG++  A+ LF  ++      +   +
Sbjct: 388 GRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTF 447

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L+DGLCK GRLK A E+F+ L       +V TYN+MI   C  G +++A  +   ME
Sbjct: 448 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKME 506



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 194/365 (53%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +L + G +P++ T N LIN  C  G      ++  ++            P+TVT
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRG------YPPDTVT 131

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T+I GLC +G V KA     K+  +    N V+Y +LI+G C   D   A  L  ++ 
Sbjct: 132 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKID 191

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNVV ++ I++ LCK   + EA  L   M   G+  +   Y+TL+ GFC+ G++ 
Sbjct: 192 GRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLK 251

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M       NV++Y+IL++  CK  +++ A S+ + ML   +KPDV+ Y+TL 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLM 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F +++V++A  +F+ M   GV  D   Y   I+G CKN  + EA+ LF+ +      
Sbjct: 312 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             I  Y+ LIDGLCKSGR+   W+L   +      A+V+TY+ +I  LC +G +D+A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIAL 431

Query: 363 FLDME 367
           F  M+
Sbjct: 432 FNKMK 436



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++  K+   G  P+  T NTLI GLC  G    AL+  +++     +       N V+Y 
Sbjct: 115 SVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL------NQVSYG 168

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G+CK G    A +L  K+      PNVV Y+++I   C     +EA  LF EM  +
Sbjct: 169 TLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVK 228

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+  +VV+++ ++   C  GK+ EA  LL  M+   + PN + YN L+D  C  G+V  A
Sbjct: 229 GISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEA 288

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + +   M     K +V +YS L++GY    E++ A  +++ M   G+ PDV  Y  L  G
Sbjct: 289 KSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 348

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   V+ A  LF EM +  +      Y + IDGLCK+G I    +L   +       +
Sbjct: 349 FCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPAN 408

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+ LIDGLCK+G L  A  LF  +    +  +  T+ I++  LC  G++  A+++F 
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 365 DMEAK 369
           D+  K
Sbjct: 469 DLLTK 473



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 160/295 (54%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++ V G   +V TY+TLI G C  G    A+ L  EM            PN  
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK------TINPNVY 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D LCKEG V +AK +   M    + P+V+TY++L+ G+    +  +A+ +F  M
Sbjct: 271 TYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V ++ +++N  CKN  +DEA  L + M Q  + P    Y++L+DG C +GR+
Sbjct: 331 SLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +L   M   G   NV +YS LI+G CKN  ++ A++L+++M  +GI+P+   +  L
Sbjct: 391 PYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             GL +  +++ A ++F ++   G   + + Y   IDG CK G + EA+ +   +
Sbjct: 451 LDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKM 505



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 142/281 (50%), Gaps = 41/281 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ +    PNV+TYN L++ LC+ G    A ++   M           KP+ +
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVM------LKACVKPDVI 305

Query: 62  TYTTIID-----------------------------------GLCKEGFVDKAKELFLKM 86
           TY+T++D                                   G CK   VD+A  LF +M
Sbjct: 306 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEM 365

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
             +N+ P +VTY+SLI G C +        L  EM D+G   NV++++ +++ LCKNG +
Sbjct: 366 HQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHL 425

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A  L   M   G+RPN F +  L+DG C  GR+  A+E+F  + + G   NV++Y+++
Sbjct: 426 DRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVM 485

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           I+G+CK   +E AL++ S+M   G  PD V +  + I LF+
Sbjct: 486 IDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFK 526



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 148/288 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A   F +M      P ++ +N ++  F     ++ A  L   +  +G+QP++++ N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C  G++     +L  +++ G  P+    NTL+ G CL G+V +A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N  SY  LING CK  +   A+ L  ++  +  KP+VV+Y+T+   L +   V  A+
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++AD   Y T I G C  G + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           CK G++K A  +   + +  +  DV+TY+ ++       ++ KA+ +F
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 154/312 (49%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+D   K      A  L  +++ + I P+++T N LI+ FC+         +
Sbjct: 57  PPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++ +G  P+ V+ N ++  LC  G++ +A    + ++  G + N   Y TL++G C 
Sbjct: 117 LAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCK 176

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +L   ++    K NV  YS +I+  CK + +  A  L+SEM  KGI  DVV 
Sbjct: 177 IGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVT 236

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+TL  G     +++ A  L +EM    +  + + Y   +D LCK G + EA  +   + 
Sbjct: 237 YSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVML 296

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+  Y+ L+DG      +K A  +F ++    +  DV TY I+I+  C +  +D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVD 356

Query: 358 KARDLFLDMEAK 369
           +A +LF +M  K
Sbjct: 357 EALNLFKEMHQK 368



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 76/217 (35%), Positives = 116/217 (53%), Gaps = 6/217 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  + + G  P+V TY  LING C+      ALNLF+EM   N        P  V
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN------MVPGIV 375

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++IDGLCK G +    +L  +M D     NV+TY+SLI G C     + A  LF +M
Sbjct: 376 TYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM 435

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            DQG++PN  +F ++++ LCK G++ +A  + + ++  G   N + YN ++DG C  G +
Sbjct: 436 KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLL 495

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
             A  +   ME  GC  +  ++ I+I    K  E  G
Sbjct: 496 EEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDENGG 532



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 132/248 (53%), Gaps = 2/248 (0%)

Query: 124  QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            +G+QP++ + N+++N  C  G++     +L  +++ G  P+   + TL++G CL G+VN+
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 184  AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
            A      + + G + N  SY  LING CK  +   A+ L  ++  +  KPDVV+YNT+  
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
             L +   V +A+ LF EM   G++AD   Y T I G C  G + EA+ L   + +     
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 304  DIRAYNCLIDGLCKSGR--LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            ++R YN L+D LCK G+  L  +  +   +      A+ VT+ I+I AL    + DK   
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 362  LFLDMEAK 369
            L  +M A+
Sbjct: 1195 LLHEMIAR 1202



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 138/266 (51%), Gaps = 8/266 (3%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A +L  +L + G +P++FT N LIN  C  G      ++  ++            P+T+T
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRG------YHPDTIT 998

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +TT+I+GLC +G V+KA     K+  +    N V+Y +LI+G C   D   A  L  ++ 
Sbjct: 999  FTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             +  +P+VV +N I++ LCK+  + +A  L   M   G+  +   YNTL+ GFC+ G++ 
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKE--IEGALSLYSEMLSKGIKPDVVIYNT 240
             A  L   M       NV +Y+IL++  CK  +  ++ +LS+ S+M   G K + V +  
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEI 1178

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGV 266
            +   LFE  + ++  KL  EM   G+
Sbjct: 1179 IISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A   F  M+     P ++ FN I++   K      A  L   +   G++P+    N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC  G++     +   +   G   +  + + LI G C   +++ AL  + ++L++G 
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGF 160

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           + + V Y TL  G+ +I     A KL  ++       +   Y T ID LCK   + EA  
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LF  + +     D+  Y+ LI G C  G+LK A  L   +    +  +V TYNI++ ALC
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 352 ADGKMDKARDLFLDM 366
            +GK+ +A+ +   M
Sbjct: 281 KEGKVKEAKSVLAVM 295



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 114/224 (50%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A      M+ +   P    +N ++D F      + A  L   +E  G + ++ + +I
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN +C   +I    S+ +++L +G  PD V  NTL  GL    QV++A    D++   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +  +Y T I+G+CK G    A++L + +     + ++  Y+ +ID LCK   +  A+
Sbjct: 160 FQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAY 219

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LF  +    + ADVVTY+ +I+  C +GK+ +A  L  +M  K
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLK 263



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 61/186 (32%), Positives = 97/186 (52%)

Query: 184  AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
            A  L   +E  G + ++F+ +ILIN +C   +I    S+ +++L +G  PD + + TL  
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
            GL    QV +A    D++   G   +  +Y T I+G+CK G    A++L R +     + 
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 304  DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            D+  YN +ID LCK   +  A+ LF  +    + ADVVTYN +I+  C  GK+ +A  L 
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 364  LDMEAK 369
              M  K
Sbjct: 1125 NKMVLK 1130



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 78/156 (50%)

Query: 214  KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            K    A+SL   +  KGI+PD+   N L      + Q+   F +  ++ + G   DT  +
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 274  RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
             T I+GLC  G + +A+     L    ++L+  +Y  LI+G+CK G  + A +L R +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 334  GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +   DVV YN +I ALC    + KA  LF +M  K
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVK 1095



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 8/127 (6%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  LF ++ V G   +V TYNTLI G C  G    A+ L  +M            PN  
Sbjct: 1084 KAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLK------TINPNVR 1137

Query: 62   TYTTIIDGLCKEG--FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            TY  ++D LCKEG   +D++  +  KM+D     N VT+  +I      ++ ++ + L  
Sbjct: 1138 TYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLH 1197

Query: 120  EMMDQGV 126
            EM+ +G+
Sbjct: 1198 EMIARGL 1204


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  268 bits (685), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 138/383 (36%), Positives = 218/383 (56%), Gaps = 22/383 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLF---EEMANGNGEFGVVCK 57
           +EA AL  ++   G +PN  TY T+++G+C+ G T+ ALNL    EEM++         K
Sbjct: 195 VEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSH--------IK 246

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN V Y+ IIDGL K+G    A  L+ +M+++ I P++ TYN +I GFC +  W+EA+ L
Sbjct: 247 PNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRL 306

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM+++ + PNVV+++ ++N   K  K  EA  L + M+  G+ PN   YN+++DGFC 
Sbjct: 307 LQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCK 366

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R++ AE +F  M + GC  +VF+++ LI+GYC  K I+    L  EM   G+  D   
Sbjct: 367 QNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTT 426

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNTL  G   +  +  A  L  +M   GV  D     T +DGLC NG + +A+E+F+ ++
Sbjct: 427 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486

Query: 298 ILKYEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             K +L           D++ YN LI GL   G+   A EL++ +P   ++ + +TY+ M
Sbjct: 487 KSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSM 546

Query: 347 IHALCADGKMDKARDLFLDMEAK 369
           I+ LC   ++D+A  +F  M +K
Sbjct: 547 INGLCKQSRLDEATQMFDSMGSK 569



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 181/386 (46%), Gaps = 46/386 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +N L+  + R     + ++L+++M        + C  +  ++  +I   C    +
Sbjct: 75  PSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ----IPC--DVYSFNILIKCFCSCSKL 128

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+      P+VVT+++L+HG C  +  +EA  LF +M     +PNVV+F  +
Sbjct: 129 PFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTL 184

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG- 195
           MN LC+ G++ EA  LL+ M++ G++PN   Y T++DG C  G    A  L   ME M  
Sbjct: 185 MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSH 244

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG----------- 244
            K NV  YS +I+G  K+     A +LY+EM  KGI PD+  YN +  G           
Sbjct: 245 IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQ 304

Query: 245 --------------------LFEIHQVERAF----KLFDEMQRHGVAADTWAYRTFIDGL 280
                               L   +  ER F    +L+DEM   G+  +T  Y + IDG 
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A  +F  +       D+  +N LIDG C + R+    EL   +    L+AD 
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
            TYN +IH  C  G ++ A DL   M
Sbjct: 425 TTYNTLIHGFCLVGDLNAALDLSQQM 450



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 157/343 (45%), Gaps = 52/343 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PN  TYN++I+G C+      A ++F  MA         C P+  
Sbjct: 337 EAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKG------CSPDVF 390

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+IDG C    +D   EL  +M +  +  +  TYN+LIHGFC   D N A  L  +M
Sbjct: 391 TFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQM 450

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           +  GV P++V+ N +++ LC NGK+                                   
Sbjct: 451 ISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNI 510

Query: 148 ------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                       EA  L + M   G+ PN   Y+++++G C   R++ A ++F SM S  
Sbjct: 511 LISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKS 570

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +V +++ L++GYCK   ++  L L+ EM  +GI  D + Y TL  G  ++  +  A 
Sbjct: 571 FSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGAL 630

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            +F EM   GV  DT   R+ +  L     +  AV +   L++
Sbjct: 631 DIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQM 673



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 131/267 (49%), Gaps = 5/267 (1%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF       +A  LF +M+     P+V+ FN +M  + +  + D    L + M +  
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +  + + +N L+  FC   ++  A   F  +  +G + +V ++S L++G C    +  AL
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L+ +M     +P+VV + TL  GL    +V  A  L D M   G+  +   Y T +DG+
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 281 CKNGYIVEAVELFRTLRILKY-ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A+ L R +  + + + ++  Y+ +IDGL K GR   A  L+  +    +  D
Sbjct: 224 CKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPD 283

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           + TYN MI   C+ G+  +A+ L  +M
Sbjct: 284 LFTYNCMIDGFCSSGRWSEAQRLLQEM 310



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 111/225 (49%), Gaps = 5/225 (2%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +++A  L   M++    P+   +N LM       R +    L+  ME      +V+S++I
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI  +C   ++  ALS + ++   G +PDVV ++TL  GL    +V  A  LF +M R  
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPN 177

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V      + T ++GLC+ G +VEAV L   +     + +   Y  ++DG+CK G    A 
Sbjct: 178 VV----TFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 326 ELFRSLPRGVLI-ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L R +     I  +VV Y+ +I  L  DG+   A +L+ +M+ K
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEK 278



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 4/197 (2%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L  GF     +  A +LF  M       +V  ++ L+    + +  +  +SLY +M  K 
Sbjct: 48  LRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQ 107

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I  DV  +N L        ++  A   F ++ + G   D   + T + GLC    + EA+
Sbjct: 108 IPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL 167

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           +LF  +       ++  +  L++GLC+ GR+  A  L   +    L  + +TY  ++  +
Sbjct: 168 DLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 223

Query: 351 CADGKMDKARDLFLDME 367
           C  G    A +L   ME
Sbjct: 224 CKIGDTVSALNLLRKME 240


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 216/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++  +G +P+  TY  ++N LC++G++ +AL+LF +M   N       K + V
Sbjct: 222 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN------IKASVV 275

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ +ID LCK+G  D A  LF +M+ + I  +VVTY+SLI G C    W++   +  EM
Sbjct: 276 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+VV+F+ +++   K GK+ EA  L   MI  G+ P+   YN+L+DGFC    +
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  M S GC+ ++ +YSILIN YCK K ++  + L+ E+ SKG+ P+ + YNTL
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 455

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            +G  +  ++  A +LF EM   GV      Y   +DGLC NG + +A+E+F  ++  + 
Sbjct: 456 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 515

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L I  YN +I G+C + ++  AW LF SL    +  DVVTYN+MI  LC  G + +A  
Sbjct: 516 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 575

Query: 362 LFLDME 367
           LF  M+
Sbjct: 576 LFRKMK 581



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 190/356 (53%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E +++T   +IN  CR    + A ++          + +  +P+T+T++T+++G C E
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLE 182

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  L  +M +    P++VT ++LI+G C     +EA  L   M++ G QP+ V++
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N LCK+G    A  L   M +  ++ +   Y+ ++D  C  G  + A  LF  ME 
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 302

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K +V +YS LI G C + + +    +  EM+ + I PDVV ++ L     +  ++  
Sbjct: 303 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 362

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L++EM   G+A DT  Y + IDG CK   + EA ++F  +     E DI  Y+ LI+
Sbjct: 363 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 422

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             CK+ R+     LFR +    LI + +TYN ++   C  GK++ A++LF +M ++
Sbjct: 423 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 478



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 41/349 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF ++ + G + +V TY++LI GLC  G       +  EM   N        P+ V
Sbjct: 292 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN------IIPDVV 345

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +ID   KEG + +AKEL+ +M    I P+ +TYNSLI GFC  N  +EA  +F  M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P++V++++++N  CK  ++D+  RL   +   G+ PN   YNTL+ GFC +G++
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL--------------------- 220
           N A+ELF  M S G   +V +Y IL++G C N E+  AL                     
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 525

Query: 221 --------------SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                         SL+  +  KG+KPDVV YN +  GL +   +  A  LF +M+  G 
Sbjct: 526 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 585

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
             D + Y   I        ++ +VEL   +++  +  D      +ID L
Sbjct: 586 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 152/280 (54%), Gaps = 6/280 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++   G  P+  TYN+LI+G C+      A  +F+ M +        C+P+ 
Sbjct: 361 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG------CEPDI 414

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +I+  CK   VD    LF ++  + + PN +TYN+L+ GFC +   N AK LF E
Sbjct: 415 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 474

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P+VV++ ++++ LC NG++++A  + E M +  +     +YN ++ G C   +
Sbjct: 475 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 534

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  LF S+   G K +V +Y+++I G CK   +  A  L+ +M   G  PD   YN 
Sbjct: 535 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 594

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           L         +  + +L +EM+  G +AD+   +  ID L
Sbjct: 595 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 118 FIEMMDQGVQ----PNVVSFNVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYN 169
           F +++++G       ++    +   E  +NG    K+++A  L E MIQ    P    +N
Sbjct: 44  FTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFN 103

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L      T + +        ME  G +H++++ +I+IN YC+ K++  A S+       
Sbjct: 104 RLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 163

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G +PD + ++TL  G     +V  A  L D M       D     T I+GLC  G + EA
Sbjct: 164 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 223

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           + L   +    ++ D   Y  +++ LCKSG   +A +LFR +    + A VV Y+I+I +
Sbjct: 224 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 283

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC DG  D A  LF +ME K
Sbjct: 284 LCKDGSFDDALSLFNEMEMK 303



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           N+A  LF  M+     P  + FN + + + +  + D      + M   G+  + +    +
Sbjct: 81  NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 140

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ +C   ++  A  +      +G + +  ++S L+NG+C    +  A++L   M+    
Sbjct: 141 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 200

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +PD+V  +TL  GL    +V  A  L D M  +G   D   Y   ++ LCK+G    A++
Sbjct: 201 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 260

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LFR +     +  +  Y+ +ID LCK G    A  LF  +    + ADVVTY+ +I  LC
Sbjct: 261 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 320

Query: 352 ADGKMDKARDLFLDM 366
            DGK D    +  +M
Sbjct: 321 NDGKWDDGAKMLREM 335


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 139/395 (35%), Positives = 220/395 (55%), Gaps = 29/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGV-V 55
           EA  +F  +   G EP++ TY TL+ G    G     H ++ L +   +   +  F + +
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 56  C-----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           C                        PN V Y T+ID LCK G VD A   F +M DE + 
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN++ Y SLIHG C  + W++A+ L +EM+D+G+  N + FN I++  CK G++ E+ +L
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IGV+P+   YNTL+DG CL G+++ A +L  SM S+G K ++ +Y  LINGYC+
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL+L+ EM+S G+ P+++ YN +  GLF   +   A +L+  + + G   +   
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I  L K GR+  A +LF +  
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 683

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              L+ DV TY++M   L   G +++  DLFL ME
Sbjct: 684 ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 208/430 (48%), Gaps = 71/430 (16%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG--------------- 50
           +  ++   GC P+VF+YN L+ GLC    +  AL L   MA+  G               
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 51  -------------------EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                              + G++  P+ VTY++II  LCK   +DKA E+   M    +
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGIL--PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+ +TYNS++HG+C +    EA     +M   GV+PNVV+++ +MN LCKNG+  EA +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTG-------------------------------- 179
           + + M + G+ P+   Y TL+ G+   G                                
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 180 ---RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              +V++A  +F  M   G   NV  Y  +I+  CK+  ++ A+  + +M+ +G+ P+++
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +Y +L  GL    + ++A +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
             +  + DI  YN LIDG C +G++  A +L  S+    +  D+VTY  +I+  C   +M
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 357 DKARDLFLDM 366
           D A  LF +M
Sbjct: 568 DDALALFKEM 577



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EPNV TY++L+N LC+ G +  A  +F+ M     E      P+  
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE------PDIA 342

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I P+   +N LI  +      ++A  +F +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVV +  +++ LCK+G +D+A    E MI  G+ PN  VY +L+ G C   + 
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++AEEL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KPD++ YNTL
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A KL   M   GV  D   Y T I+G C+   + +A+ LF+ +     
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  YN ++ GL  + R   A EL+ S+ +     ++ TYNI++H LC +   D+A  
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 642

Query: 362 LFLDM 366
           +F ++
Sbjct: 643 MFQNL 647



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 180/356 (50%), Gaps = 8/356 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +  T+  L+ GLC    T  A+++         E G  C P+  +Y  ++ GLC E
Sbjct: 122 GFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMT---ELG--CIPDVFSYNNLLKGLCDE 176

Query: 74  GFVDKAKELFLKMKDEN---INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
               +A EL   M D+      P+VV+YN++++GF    D ++A   + EM+D+G+ P+V
Sbjct: 177 NRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDV 236

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V+++ I+  LCK   MD+A  +L  M++ GV P+   YN+++ G+C +G+   A      
Sbjct: 237 VTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 296

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M S G + NV +YS L+N  CKN     A  ++  M  +G++PD+  Y TL  G      
Sbjct: 297 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           +     L D M R+G+  D   +   I    K   + +A+ +F  +R      ++  Y  
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +ID LCKSG +  A   F  +    L  +++ Y  +IH LC   K DKA +L L+M
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 171/358 (47%), Gaps = 41/358 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F K+R  G  PNV  Y T+I+ LC++G    A+  FE+M +          PN +
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG------LTPNII 447

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENI------------------------------ 91
            YT++I GLC     DKA+EL L+M D  I                              
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 92  -----NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                 P+++TYN+LI G C A   +EA  L   M+  GV+P++V++  ++N  C+  +M
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A  L + M+  GV PN   YN ++ G   T R   A+EL+VS+   G +  + +Y+I+
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CKN   + AL ++  +    ++ +   +N +   L +  +++ A  LF     +G+
Sbjct: 628 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 687

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
             D   Y    + L + G + E  +LF ++       D R  N ++  L + G +  A
Sbjct: 688 VPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 136/270 (50%), Gaps = 4/270 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P V TY  LI   C A   +        ++ +G + + ++F  ++  LC + +  +A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 151 RL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM---ESMGCKHNVFSYSIL 206
            + L  M ++G  P+ F YN L+ G C   R   A EL   M      G   +V SY+ +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG+ K  + + A S Y EML +GI PDVV Y+++   L +   +++A ++ + M ++GV
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y + + G C +G   EA+   + +R    E ++  Y+ L++ LCK+GR   A +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +F S+ +  L  D+ TY  ++      G +
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGAL 357



 Score =  131 bits (329), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 167/371 (45%), Gaps = 10/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNT 60
           +A  +F +L   G   +++  N  +  + R      A++ +  MA  G G+      P  
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKV----TPTV 92

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I   C+ G +D        +  +    + +T+  L+ G C     ++A  + + 
Sbjct: 93  HTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152

Query: 121 MMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFC 176
            M + G  P+V S+N ++  LC   +  EA  LL +M      G  P+   YNT+++GF 
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G  ++A   +  M   G   +V +YS +I   CK + ++ A+ + + M+  G+ PD +
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN++  G     Q + A     +M+  GV  +   Y + ++ LCKNG   EA ++F ++
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E DI  Y  L+ G    G L     L   + R  +  D   +NI+I A     K+
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 357 DKARDLFLDME 367
           D+A  +F  M 
Sbjct: 393 DQAMLVFSKMR 403



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TYNTLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS------VGVKPDI 551

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G C+   +D A  LF +M    ++PN++TYN ++ G  +      AK L++ 
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A++LF +  + G   +V +YS++     +   +E    L+  M   G   D  + N+
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 732 IVRKLLQRGDITRA 745



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 29/181 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV------- 54
           +A ALF ++   G  PN+ TYN ++ GL  T  T  A  L+  +     +  +       
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628

Query: 55  --VCKPN--------------------TVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
             +CK N                    T T+  +I  L K G +D+AK+LF       + 
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+V TY+ +           E   LF+ M + G   +    N I+ +L + G +  A   
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748

Query: 153 L 153
           L
Sbjct: 749 L 749



 Score = 42.7 bits (99), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL--KYELDIRAYN 309
           E A  +FDE+ R G  A  +     +  + ++          R  R    K    +  Y 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
            LI   C++GRL + +    ++ +     D +T+  ++  LCAD +   A D+ L
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 216/366 (59%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++  +G +P+  TY  ++N LC++G++ +AL+LF +M   N       K + V
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN------IKASVV 246

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ +ID LCK+G  D A  LF +M+ + I  +VVTY+SLI G C    W++   +  EM
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+VV+F+ +++   K GK+ EA  L   MI  G+ P+   YN+L+DGFC    +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  M S GC+ ++ +YSILIN YCK K ++  + L+ E+ SKG+ P+ + YNTL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            +G  +  ++  A +LF EM   GV      Y   +DGLC NG + +A+E+F  ++  + 
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L I  YN +I G+C + ++  AW LF SL    +  DVVTYN+MI  LC  G + +A  
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546

Query: 362 LFLDME 367
           LF  M+
Sbjct: 547 LFRKMK 552



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 190/356 (53%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E +++T   +IN  CR    + A ++          + +  +P+T+T++T+++G C E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLE 153

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  L  +M +    P++VT ++LI+G C     +EA  L   M++ G QP+ V++
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N LCK+G    A  L   M +  ++ +   Y+ ++D  C  G  + A  LF  ME 
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K +V +YS LI G C + + +    +  EM+ + I PDVV ++ L     +  ++  
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L++EM   G+A DT  Y + IDG CK   + EA ++F  +     E DI  Y+ LI+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             CK+ R+     LFR +    LI + +TYN ++   C  GK++ A++LF +M ++
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 41/349 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF ++ + G + +V TY++LI GLC  G       +  EM   N        P+ V
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN------IIPDVV 316

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +ID   KEG + +AKEL+ +M    I P+ +TYNSLI GFC  N  +EA  +F  M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P++V++++++N  CK  ++D+  RL   +   G+ PN   YNTL+ GFC +G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL--------------------- 220
           N A+ELF  M S G   +V +Y IL++G C N E+  AL                     
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496

Query: 221 --------------SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                         SL+  +  KG+KPDVV YN +  GL +   +  A  LF +M+  G 
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
             D + Y   I        ++ +VEL   +++  +  D      +ID L
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 152/280 (54%), Gaps = 6/280 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++   G  P+  TYN+LI+G C+      A  +F+ M +        C+P+ 
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG------CEPDI 385

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +I+  CK   VD    LF ++  + + PN +TYN+L+ GFC +   N AK LF E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P+VV++ ++++ LC NG++++A  + E M +  +     +YN ++ G C   +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  LF S+   G K +V +Y+++I G CK   +  A  L+ +M   G  PD   YN 
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           L         +  + +L +EM+  G +AD+   +  ID L
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 8/260 (3%)

Query: 118 FIEMMDQGVQ----PNVVSFNVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYN 169
           F +++++G       ++    +   E  +NG    K+++A  L E MIQ    P    +N
Sbjct: 15  FTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFN 74

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L      T + +        ME  G +H++++ +I+IN YC+ K++  A S+       
Sbjct: 75  RLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 134

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G +PD + ++TL  G     +V  A  L D M       D     T I+GLC  G + EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           + L   +    ++ D   Y  +++ LCKSG   +A +LFR +    + A VV Y+I+I +
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC DG  D A  LF +ME K
Sbjct: 255 LCKDGSFDDALSLFNEMEMK 274



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 120/255 (47%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           N+A  LF  M+     P  + FN + + + +  + D      + M   G+  + +    +
Sbjct: 52  NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ +C   ++  A  +      +G + +  ++S L+NG+C    +  A++L   M+    
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +PD+V  +TL  GL    +V  A  L D M  +G   D   Y   ++ LCK+G    A++
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LFR +     +  +  Y+ +ID LCK G    A  LF  +    + ADVVTY+ +I  LC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291

Query: 352 ADGKMDKARDLFLDM 366
            DGK D    +  +M
Sbjct: 292 NDGKWDDGAKMLREM 306


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  267 bits (683), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 138/346 (39%), Positives = 210/346 (60%), Gaps = 6/346 (1%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y TLI+GLC+ G T  AL+L   + +GN     + +PN V Y+TIIDG+CK+  V+ A +
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRV-DGN-----LVQPNVVMYSTIIDGMCKDKHVNDAFD 218

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           L+ +M  + I+PNVVTY++LI GF       +A  LF +M+ + ++P+V +FN++++  C
Sbjct: 219 LYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFC 278

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K+GKM E   +  +M++ G++PN   Y +LMDG+CL   VN+A+ +  +M   G   ++ 
Sbjct: 279 KDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQ 338

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           SY+ILI+G+CK K+++ A++L+ EM  K I PDVV YN+L  GL ++ ++  A KL DEM
Sbjct: 339 SYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEM 398

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              GV  D   Y + +D LCKN  + +A+ L   L+      ++  Y  LIDGLCK GRL
Sbjct: 399 HDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRL 458

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + A  +F  L        V TY +MIH  C  G  D+A  L   M+
Sbjct: 459 EDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 504



 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 130/361 (36%), Positives = 195/361 (54%), Gaps = 8/361 (2%)

Query: 4   AALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           AAL +  RV G   +PNV  Y+T+I+G+C+  H   A +L+ EM +          PN V
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG------ISPNVV 233

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I G    G +  A +LF KM  ENI P+V T+N L+ GFC      E K +F  M
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 293

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M QG++PNVV++  +M+  C   ++++A  +L  M Q GV P+   YN L+DGFC   +V
Sbjct: 294 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKV 353

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M       +V +Y+ LI+G CK  +I  AL L  EM  +G+ PD++ Y+++
Sbjct: 354 DEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSI 413

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L + HQV++A  L  +++  G+  + + Y   IDGLCK G + +A  +F  L +  Y
Sbjct: 414 LDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGY 473

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            + +  Y  +I G C  G    A  L   +     I D VTY I+I +L    + DKA  
Sbjct: 474 NITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEK 533

Query: 362 L 362
           L
Sbjct: 534 L 534



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 176/335 (52%), Gaps = 6/335 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++   G  PNV TY+ LI+G    G    A++LF +M   N       KP+  
Sbjct: 215 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN------IKPDVY 268

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++DG CK+G + + K +F  M  + I PNVVTY SL+ G+C   + N+AK +   M
Sbjct: 269 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTM 328

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P++ S+N++++  CK  K+DEA  L + M    + P+   YN+L+DG C  G++
Sbjct: 329 SQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKI 388

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G   ++ +YS +++  CKN +++ A++L +++  +GI+P++  Y  L
Sbjct: 389 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTIL 448

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A  +F+++   G       Y   I G C  G   EA+ L   ++    
Sbjct: 449 IDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSC 508

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
             D   Y  +I  L        A +L   + RG+L
Sbjct: 509 IPDAVTYEIIIRSLFDKDENDKAEKLREMITRGLL 543



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 154/362 (42%), Gaps = 86/362 (23%)

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N + Y+S+   F   ND  +A  LF  ++ Q   P  + FN I+  L K+        L 
Sbjct: 40  NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLS 99

Query: 154 ELM----------------IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-- 195
           + M                  +G  PN   + TL+ G CL G++++A     ++ +MG  
Sbjct: 100 QQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 196 -------------CK--------------------HNVFSYSILINGYCKNKEIEGALSL 222
                        CK                     NV  YS +I+G CK+K +  A  L
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           YSEM+SKGI P+VV Y+ L  G F + Q++ A  LF++M    +  D + +   +DG CK
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 283 NGYIVEAVELFRTL----------------------------RILKYEL-------DIRA 307
           +G + E   +F  +                            + + Y +       DI++
Sbjct: 280 DGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQS 339

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN LIDG CK  ++  A  LF+ +    +I DVVTYN +I  LC  GK+  A  L  +M 
Sbjct: 340 YNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 399

Query: 368 AK 369
            +
Sbjct: 400 DR 401


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  267 bits (682), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 139/395 (35%), Positives = 220/395 (55%), Gaps = 29/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGV-V 55
           EA  +F  +   G EP++ TY TL+ G    G     H ++ L +   +   +  F + +
Sbjct: 324 EARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILI 383

Query: 56  C-----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           C                        PN V Y T+ID LCK G VD A   F +M DE + 
Sbjct: 384 CAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLT 443

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN++ Y SLIHG C  + W++A+ L +EM+D+G+  N + FN I++  CK G++ E+ +L
Sbjct: 444 PNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKL 503

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IGV+P+   YNTL+DG CL G+++ A +L  SM S+G K ++ +Y  LINGYC+
Sbjct: 504 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 563

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL+L+ EM+S G+ P+++ YN +  GLF   +   A +L+  + + G   +   
Sbjct: 564 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 623

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I  L K GR+  A +LF +  
Sbjct: 624 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHS 683

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              L+ DV TY++M   L   G +++  DLFL ME
Sbjct: 684 ANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 718



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 208/430 (48%), Gaps = 71/430 (16%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG--------------- 50
           +  ++   GC P+VF+YN L+ GLC    +  AL L   MA+  G               
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 51  -------------------EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                              + G++  P+ VTY++II  LCK   +DKA E+   M    +
Sbjct: 210 GFFKEGDSDKAYSTYHEMLDRGIL--PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+ +TYNS++HG+C +    EA     +M   GV+PNVV+++ +MN LCKNG+  EA +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTG-------------------------------- 179
           + + M + G+ P+   Y TL+ G+   G                                
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYA 387

Query: 180 ---RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              +V++A  +F  M   G   NV  Y  +I+  CK+  ++ A+  + +M+ +G+ P+++
Sbjct: 388 KQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNII 447

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +Y +L  GL    + ++A +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
             +  + DI  YN LIDG C +G++  A +L  S+    +  D+VTY  +I+  C   +M
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 357 DKARDLFLDM 366
           D A  LF +M
Sbjct: 568 DDALALFKEM 577



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EPNV TY++L+N LC+ G +  A  +F+ M     E      P+  
Sbjct: 289 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE------PDIA 342

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I P+   +N LI  +      ++A  +F +M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVV +  +++ LCK+G +D+A    E MI  G+ PN  VY +L+ G C   + 
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++AEEL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KPD++ YNTL
Sbjct: 463 DKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTL 522

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A KL   M   GV  D   Y T I+G C+   + +A+ LF+ +     
Sbjct: 523 IDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  YN ++ GL  + R   A EL+ S+ +     ++ TYNI++H LC +   D+A  
Sbjct: 583 SPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALR 642

Query: 362 LFLDM 366
           +F ++
Sbjct: 643 MFQNL 647



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 179/352 (50%), Gaps = 8/352 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  T+  L+ GLC    T  A+++         E G  C P+  +Y  ++ GLC E    
Sbjct: 126 DAITFTPLLKGLCADKRTSDAMDIVLRRMT---ELG--CIPDVFSYNNLLKGLCDENRSQ 180

Query: 78  KAKELFLKMKDEN---INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           +A EL   M D+      P+VV+YN++++GF    D ++A   + EM+D+G+ P+VV+++
Sbjct: 181 EALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYS 240

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            I+  LCK   MD+A  +L  M++ GV P+   YN+++ G+C +G+   A      M S 
Sbjct: 241 SIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSD 300

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G + NV +YS L+N  CKN     A  ++  M  +G++PD+  Y TL  G      +   
Sbjct: 301 GVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEM 360

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L D M R+G+  D   +   I    K   + +A+ +F  +R      ++  Y  +ID 
Sbjct: 361 HALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDV 420

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LCKSG +  A   F  +    L  +++ Y  +IH LC   K DKA +L L+M
Sbjct: 421 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEM 472



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 171/358 (47%), Gaps = 41/358 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F K+R  G  PNV  Y T+I+ LC++G    A+  FE+M +          PN +
Sbjct: 394 QAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG------LTPNII 447

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENI------------------------------ 91
            YT++I GLC     DKA+EL L+M D  I                              
Sbjct: 448 VYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLM 507

Query: 92  -----NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                 P+++TYN+LI G C A   +EA  L   M+  GV+P++V++  ++N  C+  +M
Sbjct: 508 VRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRM 567

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A  L + M+  GV PN   YN ++ G   T R   A+EL+VS+   G +  + +Y+I+
Sbjct: 568 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNII 627

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CKN   + AL ++  +    ++ +   +N +   L +  +++ A  LF     +G+
Sbjct: 628 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGL 687

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
             D   Y    + L + G + E  +LF ++       D R  N ++  L + G +  A
Sbjct: 688 VPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 136/270 (50%), Gaps = 4/270 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P V TY  LI   C A   +        ++ +G + + ++F  ++  LC + +  +A 
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 151 RL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM---ESMGCKHNVFSYSIL 206
            + L  M ++G  P+ F YN L+ G C   R   A EL   M      G   +V SY+ +
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTV 207

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG+ K  + + A S Y EML +GI PDVV Y+++   L +   +++A ++ + M ++GV
Sbjct: 208 LNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGV 267

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y + + G C +G   EA+   + +R    E ++  Y+ L++ LCK+GR   A +
Sbjct: 268 MPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARK 327

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +F S+ +  L  D+ TY  ++      G +
Sbjct: 328 IFDSMTKRGLEPDIATYRTLLQGYATKGAL 357



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 167/371 (45%), Gaps = 10/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNT 60
           +A  +F +L   G   +++  N  +  + R      A++ +  MA  G G+      P  
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKV----TPTV 92

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I   C+ G +D        +  +    + +T+  L+ G C     ++A  + + 
Sbjct: 93  HTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152

Query: 121 MMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFC 176
            M + G  P+V S+N ++  LC   +  EA  LL +M      G  P+   YNT+++GF 
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G  ++A   +  M   G   +V +YS +I   CK + ++ A+ + + M+  G+ PD +
Sbjct: 213 KEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCM 272

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN++  G     Q + A     +M+  GV  +   Y + ++ LCKNG   EA ++F ++
Sbjct: 273 TYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSM 332

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E DI  Y  L+ G    G L     L   + R  +  D   +NI+I A     K+
Sbjct: 333 TKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKV 392

Query: 357 DKARDLFLDME 367
           D+A  +F  M 
Sbjct: 393 DQAMLVFSKMR 403



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TYNTLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS------VGVKPDI 551

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G C+   +D A  LF +M    ++PN++TYN ++ G  +      AK L++ 
Sbjct: 552 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 611

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 612 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 671

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A++LF +  + G   +V +YS++     +   +E    L+  M   G   D  + N+
Sbjct: 672 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 731

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 732 IVRKLLQRGDITRA 745



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 29/181 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV------- 54
           +A ALF ++   G  PN+ TYN ++ GL  T  T  A  L+  +     +  +       
Sbjct: 569 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 628

Query: 55  --VCKPN--------------------TVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
             +CK N                    T T+  +I  L K G +D+AK+LF       + 
Sbjct: 629 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 688

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+V TY+ +           E   LF+ M + G   +    N I+ +L + G +  A   
Sbjct: 689 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 748

Query: 153 L 153
           L
Sbjct: 749 L 749



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL--KYELDIRAYN 309
           E A  +FDE+ R G  A  +     +  + ++          R  R    K    +  Y 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
            LI   C++GRL + +    ++ +     D +T+  ++  LCAD +   A D+ L
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  266 bits (681), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 130/367 (35%), Positives = 216/367 (58%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T  +L+NG CR      A++L ++M     E G   +P+ V 
Sbjct: 139 ALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--RPDIVA 192

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  IID LCK   V+ A + F ++  + I PNVVTY +L++G C +  WN+A  L  +M+
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV++++ +++   KNGK+ EA  + E M+++ + P+   Y++L++G CL  R++
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F  M S GC  +V SY+ LING+CK K +E  + L+ +M  +G+  + V YNTL 
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F++  V++A + F +M   GV+ D W Y   + GLC NG + +A+ +F  ++  + +
Sbjct: 373 QGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMD 432

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LDI  Y  +I G+CK+G+++ AW LF SL    L  D+VTY  M+  LC  G   +   L
Sbjct: 433 LDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEAL 492

Query: 363 FLDMEAK 369
           +  M+ +
Sbjct: 493 YTKMKQE 499



 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 110/318 (34%), Positives = 181/318 (56%), Gaps = 6/318 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  K+   G  P++  YN +I+ LC+T     AL+ F+E+    G  G+  +PN V
Sbjct: 173 DAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEI----GRKGI--RPNVV 226

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++GLC  G  + A  L   M    I PNV+TY++L+  F       EAK +F EM
Sbjct: 227 TYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P++V+++ ++N LC + ++DEA+++ +LM+  G  P+   YNTL++GFC   RV
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRV 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M   G  +N  +Y+ LI G+ +  +++ A   +S+M S G+ PD+  YN L
Sbjct: 347 EDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNIL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +E+A  +F++MQ+  +  D   Y T I G+CK G + +A  LF +L +   
Sbjct: 407 LGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGL 466

Query: 302 ELDIRAYNCLIDGLCKSG 319
           + DI  Y  ++ GLC  G
Sbjct: 467 KPDIVTYTTMMSGLCTKG 484



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 164/296 (55%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F ++   G  PNV TY  L+NGLC +G    A  L  +M            PN +
Sbjct: 208 DALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRK------ITPNVI 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ ++D   K G V +AKE+F +M   +I+P++VTY+SLI+G C  +  +EA  +F  M
Sbjct: 262 TYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VVS+N ++N  CK  ++++  +L   M Q G+  N   YNTL+ GF   G V
Sbjct: 322 VSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDV 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A+E F  M+S G   ++++Y+IL+ G C N  +E AL ++ +M    +  D+V Y T+
Sbjct: 382 DKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTV 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             G+ +  +VE A+ LF  +   G+  D   Y T + GLC  G   E   L+  ++
Sbjct: 442 IQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMK 497



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 174/331 (52%), Gaps = 6/331 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A+NLF EM      F     P+ V +  ++  + K    D    L  KM+   I  ++ T
Sbjct: 69  AINLFREMVKTR-PF-----PSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYT 122

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N +I+ FC     + A  +  +M+  G +P+ V+   ++N  C+  ++ +A  L++ M+
Sbjct: 123 FNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +IG RP+   YN ++D  C T RVN A + F  +   G + NV +Y+ L+NG C +    
Sbjct: 183 EIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWN 242

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ + I P+V+ Y+ L     +  +V  A ++F+EM R  +  D   Y + I
Sbjct: 243 DAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC +  I EA ++F  +       D+ +YN LI+G CK+ R++   +LFR + +  L+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            + VTYN +I      G +DKA++ F  M++
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDS 393



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 147/291 (50%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A  LF +M      P++V +N L+        ++    L  +M   G++ ++ +FN+++N
Sbjct: 69  AINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVIN 128

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
             C   ++  A  +L  M+++G  P+     +L++GFC   RV+ A  L   M  +G + 
Sbjct: 129 CFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRP 188

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++ +Y+ +I+  CK + +  AL  + E+  KGI+P+VV Y  L  GL    +   A +L 
Sbjct: 189 DIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLL 248

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            +M +  +  +   Y   +D   KNG ++EA E+F  +  +  + DI  Y+ LI+GLC  
Sbjct: 249 RDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLH 308

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            R+  A ++F  +       DVV+YN +I+  C   +++    LF  M  +
Sbjct: 309 DRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQR 359



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 127/231 (54%), Gaps = 6/231 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F ++     +P++ TY++LINGLC       A  +F+ M +        C P+ 
Sbjct: 277 LEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CFPDV 330

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+I+G CK   V+   +LF KM    +  N VTYN+LI GF    D ++A+  F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQ 390

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV P++ ++N+++  LC NG +++A  + E M +  +  +   Y T++ G C TG+
Sbjct: 391 MDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGK 450

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           V  A  LF S+   G K ++ +Y+ +++G C         +LY++M  +G+
Sbjct: 451 VEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGL 501



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/258 (28%), Positives = 138/258 (53%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF EM+     P++V FN +++ + K  K D    L + M  +G+R + + +N +
Sbjct: 67  HDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIV 126

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +V+ A  +   M  +G + +  +   L+NG+C+   +  A+SL  +M+  G 
Sbjct: 127 INCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 186

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +PD+V YN +   L +  +V  A   F E+ R G+  +   Y   ++GLC +G   +A  
Sbjct: 187 RPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAAR 246

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L R +   K   ++  Y+ L+D   K+G++  A E+F  + R  +  D+VTY+ +I+ LC
Sbjct: 247 LLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLC 306

Query: 352 ADGKMDKARDLFLDMEAK 369
              ++D+A  +F  M +K
Sbjct: 307 LHDRIDEANQMFDLMVSK 324



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 124/235 (52%), Gaps = 12/235 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   GC P+V +YNTLING C+       + LF +M+    + G+V   NTV
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMS----QRGLV--NNTV 366

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I G  + G VDKA+E F +M    ++P++ TYN L+ G C      +A  +F +M
Sbjct: 367 TYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDM 426

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               +  ++V++  ++  +CK GK+++A  L   +   G++P+   Y T+M G C  G  
Sbjct: 427 QKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQ 486

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           +  E L+  M+  G   N    S+L  G   + +I  +  L  +MLS G  P ++
Sbjct: 487 HEVEALYTKMKQEGLMKN---DSMLCLG---DGDITISAELIKKMLSCGYAPSLL 535



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 116/222 (52%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+ +A  L   M++    P+   +N L+       + +    L   ME +G ++++++++
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C   ++  ALS+  +ML  G +PD V   +L  G    ++V  A  L D+M   
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D  AY   ID LCK   + +A++ F+ +       ++  Y  L++GLC SGR   A
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             L R + +  +  +V+TY+ ++ A   +GK+ +A+++F +M
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEM 286


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 137/354 (38%), Positives = 210/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +  +Y  L+NGLC+ G T  A+ L   + + +       +P+ V Y+TIIDGLCK+
Sbjct: 110 GFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRS------TRPDVVMYSTIIDGLCKD 163

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A +L+ +M    I P+V+TY +LI GFC A    EA  L  EM+ + + PN+ ++
Sbjct: 164 KLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTY 223

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK GK+ E+  LL +M + GV+P+  +Y+ LMDG+CL G V +A+++F+ M  
Sbjct: 224 NTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQ 283

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V+SY+I+ING CK K ++ A++L  EML K + PD V Y++L  GL ++ ++  
Sbjct: 284 TGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITT 343

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              L  EM   G  A+   Y + +DGLCKN  + +A+ LF  ++    + +   Y  LID
Sbjct: 344 ILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 403

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GLCK GRLK    LF+ L       DV TY +MI  LC +G  D+A  +   ME
Sbjct: 404 GLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKME 457



 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 192/354 (54%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+V  Y+T+I+GLC+      A +L+ EM N  G F     P+ +TYTT+I G C  G 
Sbjct: 147 RPDVVMYSTIIDGLCKDKLVDEAYDLYSEM-NARGIF-----PDVITYTTLICGFCLAGQ 200

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A  L  +M  +NINPN+ TYN+LI   C      E+K L   M  +GV+P+VV +++
Sbjct: 201 LMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSI 260

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +M+  C  G++ +A ++  +M+Q GV P+ + YN +++G C   RV+ A  L   M    
Sbjct: 261 LMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKN 320

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +  +YS LI+G CK   I   L L  EM  +G   ++V YN+L  GL +   +++A 
Sbjct: 321 MIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAI 380

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF +M+  G+  + + Y   IDGLCK G + +   LF+ L +  Y +D+  Y  +I GL
Sbjct: 381 ALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGL 440

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G    A  +   +     I + VT+ I+I +L    + DKA  L  +M AK
Sbjct: 441 CKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAK 494



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 188/361 (52%), Gaps = 6/361 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G +PN    NTL+ GLC  G    +L+  +++     +       + V+Y  +++
Sbjct: 70  KILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQM------DQVSYGILLN 123

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLCK G    A +L   ++D +  P+VV Y+++I G C     +EA  L+ EM  +G+ P
Sbjct: 124 GLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFP 183

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +V+++  ++   C  G++ EA  LL  MI   + PN + YNTL+D  C  G+V  ++ L 
Sbjct: 184 DVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLL 243

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G K +V  YSIL++GYC   E++ A  ++  M+  G+ PDV  YN +  GL + 
Sbjct: 244 AVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKG 303

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +V+ A  L  EM    +  DT  Y + IDGLCK G I   ++L + +       ++  Y
Sbjct: 304 KRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTY 363

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N L+DGLCK+  L  A  LF  +    +  +  TY  +I  LC  G++ K + LF  +  
Sbjct: 364 NSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLV 423

Query: 369 K 369
           K
Sbjct: 424 K 424



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 178/353 (50%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  +  ++  L +  H    ++L ++M       G+V  P+ VT + +I+  C  G +
Sbjct: 8   PPIIEFGKILGSLVKMKHYPTVISLSKQMEAK----GIV--PDLVTLSILINCFCHLGQM 61

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             +  +  K+      PN +  N+L+ G C   +  ++     +++ QG Q + VS+ ++
Sbjct: 62  AFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGIL 121

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LCK G+   A +LL  +     RP+  +Y+T++DG C    V+ A +L+  M + G 
Sbjct: 122 LNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGI 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y+ LI G+C   ++  A  L +EM+ K I P++  YNTL   L +  +V+ +  
Sbjct: 182 FPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKN 241

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L   M + GV  D   Y   +DG C  G + +A ++F  +       D+ +YN +I+GLC
Sbjct: 242 LLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLC 301

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K  R+  A  L R +    +I D VTY+ +I  LC  G++    DL  +M  +
Sbjct: 302 KGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHR 354



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 149/280 (53%), Gaps = 6/280 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L  ++ +    PN++TYNTLI+ LC+ G    + NL   M       GV  KP+ 
Sbjct: 202 MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKK----GV--KPDV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ ++DG C  G V KAK++FL M    +NP+V +YN +I+G C     +EA  L  E
Sbjct: 256 VIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLRE 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P+ V+++ +++ LCK G++     L + M   G   N   YN+L+DG C    
Sbjct: 316 MLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQN 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A  LF+ M+  G + N ++Y+ LI+G CK   ++   +L+  +L KG   DV  Y  
Sbjct: 376 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTV 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +  GL +    + A  +  +M+ +G   +   +   I  L
Sbjct: 436 MISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSL 475



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 128/232 (55%), Gaps = 6/232 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F+ +   G  P+V++YN +INGLC+      A+NL  EM + N        P+TV
Sbjct: 273 KAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKN------MIPDTV 326

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++IDGLCK G +    +L  +M       N+VTYNSL+ G C   + ++A  LF++M
Sbjct: 327 TYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKM 386

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+QPN  ++  +++ LCK G++ +   L + ++  G   + + Y  ++ G C  G  
Sbjct: 387 KERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMF 446

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           + A  +   ME  GC  N  ++ I+I    +  E + A  L  EM++KG+ P
Sbjct: 447 DEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/367 (37%), Positives = 215/367 (58%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ ++   G EP+V +YNTLINGLC +G+T +A+++F++M   NG     CKPN VT
Sbjct: 182 AVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQ-NG-----CKPNVVT 235

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIID LCK+  V+ A +   +M    I P+ +TYNS++HG C     NEA  LF  M 
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +P+VV++N+I++ L K+  +++A+  L  M+  G+ P+   Y T++ G C  G++N
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN 355

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  ME  GCK +V +Y+ +I+  CK++ +  A+   SEM+ +GI P+ V Y+T+ 
Sbjct: 356 EAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + Q++ A +LF EM    V  +T  +   +DGLC+ G + EA  +F T+     E
Sbjct: 416 HGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVE 475

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +I  YN L++G C   ++  A ++F  +       D+ +YNI+I+  C   +MDKA+ L
Sbjct: 476 PNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKAL 535

Query: 363 FLDMEAK 369
              M  K
Sbjct: 536 LTQMSVK 542



 Score =  264 bits (674), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 137/362 (37%), Positives = 216/362 (59%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA    ++   G  P+V TY T+++GLC  G    A+ LF++M          CKP+ V
Sbjct: 321 DAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKG------CKPDVV 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LCK+  V+ A E   +M D  I PN VTY++++HGFC     +EA  LF EM
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PN ++F+++++ LC+ G + EA  + E M + GV PN + YN LM+G+CL  ++
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ++F  M   GC  ++ SY+ILINGYC ++ ++ A +L ++M  K + P+ V YNT+
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTI 554

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + ++  A +LF +M   G+      Y   ++GLCK+G++ EA++LF++++  K 
Sbjct: 555 MKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E DI  Y  LI+G+   G+L++A  LF  L    +     TYN+MI  L  +G  D+A +
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYE 674

Query: 362 LF 363
           LF
Sbjct: 675 LF 676



 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 212/361 (58%), Gaps = 6/361 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++ +FG    V++ N LIN LCR  H   A++++ +M      F +  +P+ +T+TT+I+
Sbjct: 118 QMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVWGKM------FKLGIQPDVITFTTLIN 171

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G+C EG +  A EL+ +M      P+V++YN+LI+G C + + N A  +F +M   G +P
Sbjct: 172 GVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKP 231

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV++N I++ LCK+  +++A   L  M+  G+ P+A  YN+++ G C  G++N A  LF
Sbjct: 232 NVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLF 291

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ME  GCK +V +Y+I+I+   K++ +  A    SEM+ +GI PDVV Y T+  GL  +
Sbjct: 292 KRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYL 351

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            Q+  A +LF +M++ G   D  AY T ID LCK+  + +A+E    +       +   Y
Sbjct: 352 GQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTY 411

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           + ++ G C  G+L  A +LF+ +    ++ + +T++I++  LC +G + +AR +F  M  
Sbjct: 412 STILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTE 471

Query: 369 K 369
           K
Sbjct: 472 K 472



 Score =  237 bits (604), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 201/356 (56%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYN++++GLC  G    A  LF+ M   NG     CKP+ VTY  IID L K+
Sbjct: 263 GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQ-NG-----CKPDVVTYNIIIDSLYKD 316

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V+ A +   +M D+ I P+VVTY +++HG CY    NEA  LF +M  +G +P+VV++
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAY 376

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++ LCK+  +++A   L  M+  G+ PNA  Y+T++ GFC  G+++ A +LF  M  
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVG 436

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                N  ++SIL++G C+   +  A  ++  M  KG++P++  YN L  G     ++  
Sbjct: 437 RNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNE 496

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K+F+ M   G A D  +Y   I+G C +  + +A  L   + + K   +   YN ++ 
Sbjct: 497 ARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMK 556

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GLC  GRL  A ELF+ +    ++  ++TY+I+++ LC  G +D+A  LF  M+ K
Sbjct: 557 GLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK 612



 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 203/367 (55%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   GC+P+V TYN +I+ L +      A +   EM +          P+ V
Sbjct: 286 EATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG------IPPDVV 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTTI+ GLC  G +++A  LF KM+ +   P+VV YN++I   C     N+A     EM
Sbjct: 340 TYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ PN V+++ I++  C  G++DEA++L + M+   V PN   ++ L+DG C  G V
Sbjct: 400 VDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +F +M   G + N+++Y+ L+NGYC   ++  A  ++  M+ KG  PD+  YN L
Sbjct: 460 SEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     ++++A  L  +M    +  +T  Y T + GLC  G +++A ELF+ +     
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGM 579

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  Y+ L++GLCK G L  A +LF+S+    L  D++ Y I+I  +   GK++ A+ 
Sbjct: 580 LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG 639

Query: 362 LFLDMEA 368
           LF  + A
Sbjct: 640 LFSKLSA 646



 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 109/292 (37%), Positives = 171/292 (58%), Gaps = 6/292 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  TY+T+++G C  G    A  LF+EM   N        PNT+T++ ++DGLC+E
Sbjct: 403 GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN------VMPNTLTFSILVDGLCQE 456

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A+ +F  M ++ + PN+ TYN+L++G+C     NEA+ +F  M+ +G  P++ S+
Sbjct: 457 GMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSY 516

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N  C + +MD+A  LL  M    + PN   YNT+M G C  GR+  A+ELF  M S
Sbjct: 517 NILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCS 576

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    + +YSIL+NG CK+  ++ AL L+  M  K ++PD+++Y  L  G+F   ++E 
Sbjct: 577 SGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEV 636

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           A  LF ++   G+      Y   I GL K G   EA ELFR  +++K+ + I
Sbjct: 637 AKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHNVII 688



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 145/294 (49%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A   F +M   N  P++V +   +        ++    L  +M   GV   V S N+
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC+   +D A  +   M ++G++P+   + TL++G C  G++  A EL+  M   G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +V SY+ LING C +     A+ ++ +M   G KP+VV YNT+   L +   V  A 
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
               EM   G+  D   Y + + GLC  G + EA  LF+ +     + D+  YN +ID L
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K   +  A +    +    +  DVVTY  ++H LC  G++++A  LF  ME K
Sbjct: 314 YKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQK 367



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 6/118 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF K+   G  P + TY+ L+NGLC+ GH   AL LF+ M     E      P+ 
Sbjct: 565 LDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLE------PDI 618

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           + YT +I+G+   G ++ AK LF K+  + I P   TYN +I G       +EA  LF
Sbjct: 619 ILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELF 676


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  265 bits (678), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 136/339 (40%), Positives = 206/339 (60%), Gaps = 6/339 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +R  G  P V TYN+LI G+C +G    A  LF+EM   N       KP+ V
Sbjct: 262 EAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWN------MKPDVV 315

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ ++D LCKEG V +A  +F KM    + P++VTY+SLIHG C ++ W E+  L  EM
Sbjct: 316 TFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEM 375

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+VV+F++ ++  CK G + EA  ++ LMI+ G+RPN   YN+LMDG+CL  ++
Sbjct: 376 LSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQM 435

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  M + GC  +V SY+ILI GYCK++ I+ A  L+ EM  KG+ P+ + + TL
Sbjct: 436 DEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTL 495

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +   A +LF +M  HG   D   Y T + G CK+G++ EA+ LF  L+  + 
Sbjct: 496 ISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQL 555

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           + +      L+ G+CK+G+L+ A ELF SL    L  DV
Sbjct: 556 KPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/350 (34%), Positives = 199/350 (56%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P V+T+  ++NGLC+ G T  A+   ++M   +      C+P  V+Y+ IID LCK 
Sbjct: 204 GYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELD------CEPEVVSYSIIIDSLCKN 257

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++A +LF  M+   I+P VVTYNSLI+G C +  W +A  LF EM++  ++P+VV+F
Sbjct: 258 RLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTF 317

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++ LCK G + EA  +   MIQI + P+   Y++L+ G C +     +  L   M S
Sbjct: 318 SILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLS 377

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              + +V ++SI ++ +CK   +  A S+ + M+ +G++P+VV YN+L  G     Q++ 
Sbjct: 378 RNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDE 437

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K+FD M   G A D  +Y   I G CK+  I EA +LF  +       +   +  LI 
Sbjct: 438 ARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLIS 497

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           GLC++GR   A ELF+ +       D++TY+ ++   C  G +D+A  LF
Sbjct: 498 GLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALF 547



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 192/360 (53%), Gaps = 10/360 (2%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYTTII 67
           K+   G +P++ T+NTLINGLC  G  + A+   +  M+ G        +P   T+T I+
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY-------QPTVYTHTMIV 216

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           +GLCK G    A     KM + +  P VV+Y+ +I   C     NEA  LF  M   G+ 
Sbjct: 217 NGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGIS 276

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P VV++N ++  +C +G+  +AS L + M++  ++P+   ++ L+D  C  G V  A  +
Sbjct: 277 PTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSV 336

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF- 246
           F  M  +  + ++ +YS LI+G CK+   + + +L +EMLS+ I+PDVV + ++++ +F 
Sbjct: 337 FGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTF-SIWVDVFC 395

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +   V  A  + + M   G+  +   Y + +DG C +  + EA ++F  +       D+ 
Sbjct: 396 KKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVL 455

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +YN LI G CKS R+  A +LF  +    L  + +T+  +I  LC  G+   A++LF  M
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 189/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
              +++ K+  FG   +V+T   LIN LC      +  ++  ++      F +  KP+ +
Sbjct: 122 SVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKI------FKLGFKPSII 175

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I+GLC EG + +A E    +      P V T+  +++G C     + A     +M
Sbjct: 176 TFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKM 235

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++   +P VVS+++I++ LCKN  ++EA  L   M  IG+ P    YN+L+ G C +G+ 
Sbjct: 236 VELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW 295

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  M     K +V ++SIL++  CK   +  ALS++ +M+   ++PD+V Y++L
Sbjct: 296 KQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSL 355

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +    + +  L +EM    +  D   +  ++D  CK G + EA  +   +     
Sbjct: 356 IHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  YN L+DG C   ++  A ++F  +       DV++YNI+I   C   ++D+A+ 
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQ 475

Query: 362 LFLDMEAK 369
           LF +M  K
Sbjct: 476 LFDEMSHK 483



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 161/269 (59%), Gaps = 6/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA ++F K+     EP++ TY++LI+G+C++     +  L  EM + N       +P+ 
Sbjct: 331 LEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRN------IRPDV 384

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT++  +D  CK+G V +A+ +   M +  + PNVVTYNSL+ G+C  +  +EA+ +F  
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  P+V+S+N+++   CK+ ++DEA +L + M   G+ PN+  + TL+ G C  GR
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A+ELF  M S GC  ++ +YS L++G+CK+  ++ AL+L+  +    +KP+ VI   
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKI 564

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L  G+ +  ++E A +LF  +    +  D
Sbjct: 565 LLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 162/325 (49%), Gaps = 6/325 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL  F +M + N        P    +  ++  L +    D    ++ KM+   ++ +V T
Sbjct: 88  ALAYFNQMVHMNPF------PCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYT 141

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
              LI+  C+ +       +  ++   G +P++++FN ++N LC  G++ EA   L+ ++
Sbjct: 142 LTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIM 201

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G +P  + +  +++G C  G+ + A      M  + C+  V SYSI+I+  CKN+ + 
Sbjct: 202 SRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVN 261

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ L+  M S GI P VV YN+L  G+    Q ++A  LF EM    +  D   +   +
Sbjct: 262 EAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILV 321

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           D LCK G ++EA+ +F  +  +  E DI  Y+ LI G+CKS   K +  L   +    + 
Sbjct: 322 DALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIR 381

Query: 338 ADVVTYNIMIHALCADGKMDKARDL 362
            DVVT++I +   C  G + +A+ +
Sbjct: 382 PDVVTFSIWVDVFCKKGMVSEAQSI 406


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 136/366 (37%), Positives = 213/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++  +GCE N  TY  ++N +C++G+T +AL+LF +M   +       K + V
Sbjct: 192 EALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERS------IKASVV 245

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ +ID LCK+G +D A  LF +M+ + I  +VV Y+S+I G C    W++   +  EM
Sbjct: 246 QYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREM 305

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVV+F+ +++   K GK+ EA  L   M+  G+ P+   Y++L+DGFC   R+
Sbjct: 306 IGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRL 365

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M S GC+ N+ +YSILIN YCK K ++  + L+ E+ SKG+  D V YNTL
Sbjct: 366 GEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTL 425

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  ++  A +LF EM   GV      Y   +DGLC NG + +A+E+F  ++  + 
Sbjct: 426 VQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRM 485

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L I  YN +I G+C + ++  AW LF SL    +  DV+TYN+MI  LC  G + +A  
Sbjct: 486 ILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADM 545

Query: 362 LFLDME 367
           LF  M+
Sbjct: 546 LFRKMK 551



 Score =  227 bits (578), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 204/368 (55%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++      PNV T NTLINGLC  G    AL L + M     ++G  C+ N +
Sbjct: 157 EAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMV----KYG--CEANEI 210

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++ +CK G    A +LF KM++ +I  +VV Y+ +I   C   + ++A  LF EM
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ +VV+++ I+  LC +G+ D+ +++L  MI   + PN   ++ L+D F   G++
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL 330

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+EL+  M + G   +  +YS LI+G+CK   +  A  +   M+SKG +P++V Y+ L
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSIL 390

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +  +V+   +LF E+   G+ ADT  Y T + G C++G +  A ELF+ +     
Sbjct: 391 INSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGV 450

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  Y  L+DGLC +G L+ A E+F  + +  +I  +  YNI+IH +C   K+D A  
Sbjct: 451 PPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWS 510

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 511 LFCSLSVK 518



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 188/356 (52%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E N++T N +IN  CR    + A ++         +FG   +PNT+T++T+I+G C E
Sbjct: 99  GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRAL----KFGF--EPNTITFSTLINGFCLE 152

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  L  +M +    PNVVT N+LI+G C      EA  L   M+  G + N +++
Sbjct: 153 GRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N +CK+G    A  L   M +  ++ +   Y+ ++D  C  G ++ A  LF  ME 
Sbjct: 213 GPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEM 272

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K +V +YS +I G C +   +    +  EM+ + I P+VV ++ L     +  ++  
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLE 332

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L++EM   G+A DT  Y + IDG CK   + EA ++   +     E +I  Y+ LI+
Sbjct: 333 AKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILIN 392

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             CK+ R+     LF  +    L+AD VTYN ++   C  GK++ A++LF +M ++
Sbjct: 393 SYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR 448



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 41/338 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF ++ + G + +V  Y+++I GLC  G       +  EM   N        PN V
Sbjct: 262 DALSLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRN------IIPNVV 315

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +ID   KEG + +AKEL+ +M    I P+ +TY+SLI GFC  N   EA  +   M
Sbjct: 316 TFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLM 375

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +PN+V++++++N  CK  ++D   RL   +   G+  +   YNTL+ GFC +G++
Sbjct: 376 VSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKL 435

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------------- 228
           N A+ELF  M S G   +V +Y IL++G C N E++ AL ++ +M               
Sbjct: 436 NVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNII 495

Query: 229 ----------------------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                 KG+KPDV+ YN +  GL +   +  A  LF +M+  G 
Sbjct: 496 IHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 555

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           A     Y   I        ++ +VEL   +++  +  D
Sbjct: 556 APSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAAD 593



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 145/277 (52%), Gaps = 6/277 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++   G  P+  TY++LI+G C+      A  + + M +        C+PN 
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG------CEPNI 384

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +I+  CK   VD    LF ++  + +  + VTYN+L+ GFC +   N AK LF E
Sbjct: 385 VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P+VV++ ++++ LC NG++ +A  + E M +  +     +YN ++ G C   +
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  LF S+   G K +V +Y+++I G CK   +  A  L+ +M   G  P    YN 
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNI 564

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L         V  + +L +EM+  G AAD    +  +
Sbjct: 565 LIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 150/294 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V++A +LF  M      P+++ ++ L        +++       EM   G++ N+ + N+
Sbjct: 50  VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  K+  A  ++   ++ G  PN   ++TL++GFCL GRV+ A  L   M  M 
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV + + LING C    +  AL L   M+  G + + + Y  +   + +      A 
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF +M+   + A    Y   ID LCK+G + +A+ LF  + +   + D+ AY+ +I GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C  GR     ++ R +    +I +VVT++ +I     +GK+ +A++L+ +M A+
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVAR 343



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 107/227 (47%), Gaps = 39/227 (17%)

Query: 180 RVNRAEELFVS-----------------------------------MESMGCKHNVFSYS 204
           +VN A +LF S                                   M+  G +HN+++ +
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I+IN +C+ +++  A S+    L  G +P+ + ++TL  G     +V  A  L D M   
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY--ELDIRAYNCLIDGLCKSGRLK 322
               +     T I+GLC  G + EA+ L    R++KY  E +   Y  +++ +CKSG   
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLID--RMVKYGCEANEITYGPVLNRMCKSGNTA 226

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +A +LFR +    + A VV Y+I+I +LC DG +D A  LF +ME K
Sbjct: 227 LALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMK 273


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 141/355 (39%), Positives = 212/355 (59%), Gaps = 8/355 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N  +Y TL+NGLC+ G T  A+ L   + + +       +P+ V Y TIIDGLCK+
Sbjct: 232 GFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRS------TRPDVVMYNTIIDGLCKD 285

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++A + + +M    I P+V+TY++LI GFC A     A  L  EM  + + P+V ++
Sbjct: 286 KLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTY 345

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++++ LCK GK+ EA  LL +M + GV+PN   Y+TLMDG+CL G V+ A+++F +M  
Sbjct: 346 TILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQ 405

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +V SY+I+ING CK K ++ A++L  EML K + P+ V YN+L  GL +  ++  
Sbjct: 406 TEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITS 465

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L  E+   G  AD   Y + +DGLCKN  + +A+ LF  ++    + +   Y  LID
Sbjct: 466 ALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALID 525

Query: 314 GLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GLCK  RLK A +LF+  L +G  I DV TYN+MI  LC +G +D+A  +   ME
Sbjct: 526 GLCKGARLKNAQKLFQHILVKGCCI-DVYTYNVMIGGLCKEGMLDEALAMKSKME 579



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F  + +    P++  +  ++  L +  H   A++L ++M     E      P+ V
Sbjct: 115 DAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIE------PDLV 168

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +I+  C  G +  +  +  K+      PN +   +L+ G C   +  ++     ++
Sbjct: 169 TLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKV 228

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG Q N VS+  ++N LCK G+   A +LL ++     RP+  +YNT++DG C    V
Sbjct: 229 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLV 288

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A + +  M S G   +V +YS LI G+C   ++ GA SL +EM  K I PDV  Y  L
Sbjct: 289 NEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTIL 348

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +++ A  L   M + GV  +   Y T +DG C  G +  A ++F  +   + 
Sbjct: 349 IDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              + +YN +I+GLCK   +  A  L R +    ++ + VTYN +I  LC  G++  A D
Sbjct: 409 NPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALD 468

Query: 362 LFLDMEAK 369
           L  ++  +
Sbjct: 469 LMKELHHR 476



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 152/280 (54%), Gaps = 6/280 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A +L  ++ +    P+V+TY  LI+ LC+ G    A NL   M     + GV  KPN 
Sbjct: 324 MGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT----KEGV--KPNV 377

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T++DG C  G V  AK++F  M    +NP+V +YN +I+G C     +EA  L  E
Sbjct: 378 VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + V PN V++N +++ LCK+G++  A  L++ +   G   +   Y +L+DG C    
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A  LF+ M+  G + N ++Y+ LI+G CK   ++ A  L+  +L KG   DV  YN 
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNV 557

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +  GL +   ++ A  +  +M+ +G   D   +   I  L
Sbjct: 558 MIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSL 597



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 146/275 (53%), Gaps = 10/275 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G +PNV TY+TL++G C  G    A  +F  M            P+  
Sbjct: 360 EAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTE------VNPSVC 413

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I+GLCK   VD+A  L  +M  +N+ PN VTYNSLI G C +     A  L  E+
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G   +V+++  +++ LCKN  +D+A  L   M + G++PN + Y  L+DG C   R+
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++LF  +   GC  +V++Y+++I G CK   ++ AL++ S+M   G  PD V +  +
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
              LFE  + ++A KL  EM    +A     +R F
Sbjct: 594 IRSLFEKDENDKAEKLLHEM----IAKGLLHFRNF 624



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/302 (22%), Positives = 132/302 (43%), Gaps = 26/302 (8%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + I PN+VT + LI+   +      +  +  +++  G QPN ++   +M      G+   
Sbjct: 5   KGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMK-----GETRC 59

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGF---------------------CLTGRVNRAEEL 187
           A +L  ++     RP  ++ ++L                          +   V+ A   
Sbjct: 60  AIKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQ 119

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M  M    ++  +  ++    K K    A+SL  +M  KGI+PD+V  + L      
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           + Q+  +F +  ++ + G   +T    T + GLC  G + +++     +    ++++  +
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y  L++GLCK G  + A +L R +       DVV YN +I  LC D  +++A D + +M 
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299

Query: 368 AK 369
           ++
Sbjct: 300 SR 301


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  264 bits (674), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 141/368 (38%), Positives = 224/368 (60%), Gaps = 7/368 (1%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A LF  K+   G   +  +Y TLI+GLC+ G T  AL+L + + +GN     + +PN
Sbjct: 171 IQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV-DGN-----LVQPN 224

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y TIID +CK   V++A +LF +M  + I+P+VVTY++LI GFC     N+A  LF 
Sbjct: 225 VVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFN 284

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+ + ++P+V +FN+++N  CK+GKM E   + ++M++ G++PN   YN+LMDG+CL  
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            VN+A+ +F +M   G   ++ SYSI+ING+CK K+ + A++L+ EM  K I PDVV Y+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  GL +  ++  A +L D+M   GV      Y + +D LCK   + +A+ L   L+  
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDK 464

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + ++  Y+ LI GLC+SG+L+ A ++F  L       +V TY IMI   C +G  ++A
Sbjct: 465 GIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEA 524

Query: 360 RDLFLDME 367
             L   ME
Sbjct: 525 LALLSKME 532



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 195/368 (52%), Gaps = 8/368 (2%)

Query: 4   AALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           AAL +  RV G   +PNV  YNT+I+ +C+      A +LF EM +          P+ V
Sbjct: 208 AALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKG------ISPDVV 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I G C  G ++ A +LF KM  ENI P+V T+N L++ FC      E K +F  M
Sbjct: 262 TYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M QG++PN V++N +M+  C   ++++A  +   M Q GV P+   Y+ +++GFC   + 
Sbjct: 322 MKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKF 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M       +V +YS LI+G  K+  I  AL L  +M  +G+ P +  YN++
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSI 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +IHQV++A  L  +++  G+  + + Y   I GLC++G + +A ++F  L +  +
Sbjct: 442 LDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH 501

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L++  Y  +I G C  G    A  L   +     I D  TY I+I +L    + D A  
Sbjct: 502 NLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEK 561

Query: 362 LFLDMEAK 369
           L  +M A+
Sbjct: 562 LLREMIAR 569



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 200/364 (54%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  K+   G +PN+   N LIN  C+ G    A ++F ++     + G V  P+T+T+TT
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKIL----KMGYV--PDTITFTT 160

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GLC +G + +A     K+     + + ++Y +LIHG C   +   A  L   +    
Sbjct: 161 LIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL 220

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           VQPNVV +N I++ +CK   ++EA  L   MI  G+ P+   Y+ L+ GFC+ G++N A 
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +LF  M     K +V++++IL+N +CK+ +++   +++  M+ +GIKP+ V YN+L  G 
Sbjct: 281 DLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGY 340

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             + +V +A  +F+ M + GV  D  +Y   I+G CK     EA+ LF+ +       D+
Sbjct: 341 CLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDV 400

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y+ LIDGL KSGR+  A +L   +    +   + TYN ++ ALC   ++DKA  L   
Sbjct: 401 VTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTK 460

Query: 366 MEAK 369
           ++ K
Sbjct: 461 LKDK 464



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 178/335 (53%), Gaps = 7/335 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P+V TY+ LI+G C  G    A++LF +M   N       KP+  
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILEN------IKPDVY 296

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++  CK+G + + K +F  M  + I PN VTYNSL+ G+C   + N+AK +F  M
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTM 356

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P++ S+++++N  CK  K DEA  L + M +  + P+   Y++L+DG   +GR+
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRI 416

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G    + +Y+ +++  CK  +++ A++L +++  KGI+P++  Y+ L
Sbjct: 417 SYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSIL 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A K+F+ +   G   +   Y   I G C  G   EA+ L   +     
Sbjct: 477 IKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGC 536

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGV 335
             D + Y  +I  L K     +A +L R +  RGV
Sbjct: 537 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGV 571



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 160/332 (48%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF  +   N        P    +  I+  L K         L  KM+   I PN+V 
Sbjct: 69  AVSLFNRLLRRN------TTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVN 122

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            N LI+ FC       A  +F +++  G  P+ ++F  ++  LC  G++ +A    + ++
Sbjct: 123 CNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVV 182

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G   +   Y TL+ G C  G    A +L   ++    + NV  Y+ +I+  CK K + 
Sbjct: 183 ALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVN 242

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L+SEM+SKGI PDVV Y+ L  G   + ++  A  LF++M    +  D + +   +
Sbjct: 243 EAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILV 302

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +  CK+G + E   +F  +     + +   YN L+DG C    +  A  +F ++ +G + 
Sbjct: 303 NAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVN 362

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            D+ +Y+IMI+  C   K D+A +LF +M  K
Sbjct: 363 PDIQSYSIMINGFCKIKKFDEAMNLFKEMHRK 394



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 158/310 (50%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           K N ++Y++          VD A  LF ++   N  P    +N ++     +  ++    
Sbjct: 47  KINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLY 106

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +M  +G++PN+V+ N+++N  C+ G +  A  +   ++++G  P+   + TL+ G C
Sbjct: 107 LSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLC 166

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           L G++ +A      + ++G   +  SY  LI+G CK  E   AL L   +    ++P+VV
Sbjct: 167 LKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVV 226

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +YNT+   + ++  V  AF LF EM   G++ D   Y   I G C  G + +A++LF  +
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKM 286

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +   + D+  +N L++  CK G++K    +F  + +  +  + VTYN ++   C   ++
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEV 346

Query: 357 DKARDLFLDM 366
           +KA+ +F  M
Sbjct: 347 NKAKSIFNTM 356



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 132/232 (56%), Gaps = 6/232 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F  +   G  P++ +Y+ +ING C+      A+NLF+EM   N        P+ V
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN------IIPDVV 401

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++IDGL K G +  A +L  +M D  + P + TYNS++   C  +  ++A  L  ++
Sbjct: 402 TYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+QPN+ ++++++  LC++GK+++A ++ E ++  G   N   Y  ++ GFC+ G  
Sbjct: 462 KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLF 521

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           N A  L   ME  GC  +  +Y I+I    K  E + A  L  EM+++G++P
Sbjct: 522 NEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 98/206 (47%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N   Y++    F     V+ A  LF  +         F ++ ++    K+K     L L 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M  +GIKP++V  N L     ++  +  AF +F ++ + G   DT  + T I GLC  
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G I +A      +  L +  D  +Y  LI GLCK G  + A +L + +   ++  +VV Y
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
           N +I ++C    +++A DLF +M +K
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISK 254



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 12/134 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP--- 58
           +A AL  KL+  G +PN++TY+ LI GLC++G    A  +FE         G++ K    
Sbjct: 453 KAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFE---------GLLVKGHNL 503

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  TYT +I G C EG  ++A  L  KM+D    P+  TY  +I      ++ + A+ L 
Sbjct: 504 NVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLL 563

Query: 119 IEMMDQGVQPNVVS 132
            EM+ +GV+P  ++
Sbjct: 564 REMIARGVRPRQIA 577


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  263 bits (673), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 136/350 (38%), Positives = 200/350 (57%), Gaps = 6/350 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V+TY  LINGLC+TG T+ A+    +M   N       KPN V Y+TI+DGLCK+G V 
Sbjct: 181 DVYTYGVLINGLCKTGDTLAAVEWLRKMEERNW------KPNVVVYSTIMDGLCKDGLVS 234

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  L  +M  + + PN+VTY  LI G C    W E   L  EM+  G++ ++ + N+++
Sbjct: 235 EALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILV 294

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK GK+ +A  ++  MI  G  P+ F YN+L+  +CL  ++N A  +F  M S GC 
Sbjct: 295 DAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCL 354

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++  ++ LI+G+CK+K I   + L  EM   G  PDVV + TL  G  +  +   A +L
Sbjct: 355 PDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKEL 414

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M ++G   +       +DGLCK   + EAV L   +     +L+I  Y+ L+DG+C 
Sbjct: 415 FLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCS 474

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +G+L  AWELF SLP   L  +V TY IMI  LC  G +DKA DL ++ME
Sbjct: 475 AGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINME 524



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 180/383 (46%), Gaps = 41/383 (10%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL----- 70
           +PNV  Y+T+++GLC+ G    ALNL  EM+ G G      +PN VTY  +I GL     
Sbjct: 214 KPNVVVYSTIMDGLCKDGLVSEALNLCSEMS-GKG-----VRPNLVTYACLIQGLCNFGR 267

Query: 71  ------------------------------CKEGFVDKAKELFLKMKDENINPNVVTYNS 100
                                         CKEG V +AK +   M      P+V TYNS
Sbjct: 268 WKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNS 327

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           LIH +C  N  NEA  +F  M+ +G  P++V F  +++  CK+  +++   LLE M ++G
Sbjct: 328 LIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMG 387

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             P+   + TL+ GFC  GR   A+ELF++M   G   N+ + +++++G CK   +  A+
Sbjct: 388 FVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAV 447

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           SL   M    +  ++VIY+ L  G+    ++  A++LF  +   G+  + + Y   I GL
Sbjct: 448 SLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGL 507

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G + +A +L   +       D   YN  + GL     +  + +    +       D 
Sbjct: 508 CKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDA 567

Query: 341 VTYNIMIHALCADGKMDKARDLF 363
            T  I I+ L  +    + R+ F
Sbjct: 568 ATTEITINYLSTNEGDTRIREFF 590



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 143/283 (50%), Gaps = 6/283 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A ++   + + G  P+VFTYN+LI+  C       A+ +F  M +        C P+ 
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRG------CLPDI 357

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V +T++I G CK+  ++K   L  +M      P+VVT+ +LI GFC A     AK LF+ 
Sbjct: 358 VVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLN 417

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PN+ +  VI++ LCK   + EA  L E M +  +  N  +Y+ L+DG C  G+
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A ELF S+   G + NV++Y+I+I G CK   ++ A  L   M   G  PD   YN 
Sbjct: 478 LNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNV 537

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
              GL    ++ R+ K    M+  G + D       I+ L  N
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTN 580



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 163/365 (44%), Gaps = 19/365 (5%)

Query: 15  CEPNVFTYNTLING---------LCRTGHTI---VALNLFEEMANGNGEFGVVCKPNTVT 62
           C  N +  ++  NG         LC++G       AL+LF+ MA+      +   P+   
Sbjct: 25  CSTNTYDTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMAS------MKPLPSVKD 78

Query: 63  YTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +T ++  + +      A  L   +     I  + +T N +I+  C          +   M
Sbjct: 79  FTLLLGVIVRLKHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTM 138

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++P V++   ++N LC  G + +A  L++ M ++    + + Y  L++G C TG  
Sbjct: 139 FKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDT 198

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E    ME    K NV  YS +++G CK+  +  AL+L SEM  KG++P++V Y  L
Sbjct: 199 LAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACL 258

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    + +    L DEM + G+  D       +D  CK G +++A  +   + +   
Sbjct: 259 IQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGE 318

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN LI   C   ++  A  +F  +     + D+V +  +IH  C D  ++K   
Sbjct: 319 GPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMH 378

Query: 362 LFLDM 366
           L  +M
Sbjct: 379 LLEEM 383



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 8/304 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           E  +L  ++   G   ++ T N L++  C+ G  + A ++   M   G G       P+ 
Sbjct: 270 ETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEG-------PDV 322

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY ++I   C +  +++A  +F  M      P++V + SLIHG+C   + N+   L  E
Sbjct: 323 FTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEE 382

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+VV++  ++   C+ G+   A  L   M + G  PN      ++DG C    
Sbjct: 383 MAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNL 442

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  L  +ME      N+  YSIL++G C   ++  A  L+S +  KG++ +V  Y  
Sbjct: 443 LSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTI 502

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +   +++A  L   M+ +G   D   Y  F+ GL     I  +++    +R   
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562

Query: 301 YELD 304
           + +D
Sbjct: 563 FSVD 566



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 102/209 (48%), Gaps = 6/209 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G  P+V T+ TLI G C+ G  + A  LF  M     ++G V  PN  T   
Sbjct: 379 LLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMH----KYGQV--PNLQTCAV 432

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           I+DGLCK   + +A  L   M+  N++ N+V Y+ L+ G C A   N A  LF  +  +G
Sbjct: 433 ILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +Q NV ++ +++  LCK G +D+A  LL  M + G  P+   YN  + G      + R+ 
Sbjct: 493 LQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSI 552

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNK 214
           +    M   G   +  +  I IN    N+
Sbjct: 553 KYLTIMRDKGFSVDAATTEITINYLSTNE 581



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 4/202 (1%)

Query: 172 MDGFCLTGRVNRAEE---LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           M   C +G+V   +E   LF  M SM    +V  +++L+    + K    A+SL   + S
Sbjct: 45  MRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFS 104

Query: 229 K-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
             GI+ D +  N +   L  +  V   F +   M + G+          I+GLC  G + 
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVA 164

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +AV L   +  ++Y LD+  Y  LI+GLCK+G    A E  R +       +VV Y+ ++
Sbjct: 165 QAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIM 224

Query: 348 HALCADGKMDKARDLFLDMEAK 369
             LC DG + +A +L  +M  K
Sbjct: 225 DGLCKDGLVSEALNLCSEMSGK 246


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  263 bits (673), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 137/350 (39%), Positives = 200/350 (57%), Gaps = 6/350 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V+TY  LINGLC+TG T+ A+    +M   N       KPN V Y+TI+DGLCK+G V 
Sbjct: 181 DVYTYGVLINGLCKTGDTLAAVGWLRKMEERNW------KPNVVVYSTIMDGLCKDGLVS 234

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  L  +M  + + PN+VTY  LI G C    W EA  L  EMM  G++P++   N+++
Sbjct: 235 EALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILV 294

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK GK+ +A  ++  MI  G  P+ F YN+L+  +CL  ++N A  +F  M S G  
Sbjct: 295 DAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRL 354

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++  ++ LI+G+CK+K I  A+ L  EM   G  PDV  + TL  G  +  +   A +L
Sbjct: 355 PDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKEL 414

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M ++G   +       +DGLCK   + EAV L + +     +L+I  Y+ L+DG+C 
Sbjct: 415 FLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCS 474

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +G+L  AWELF SLP   L  +V  Y IMI  LC  G +DKA DL ++ME
Sbjct: 475 AGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINME 524



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 176/359 (49%), Gaps = 6/359 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A     K+     +PNV  Y+T+++GLC+ G    ALNL  EM NG G      +PN 
Sbjct: 199 LAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEM-NGKG-----VRPNL 252

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I GLC  G   +A  L  +M    + P++   N L+  FC      +AK +   
Sbjct: 253 VTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGF 312

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  P+V ++N +++  C   KM+EA R+  LM+  G  P+  V+ +L+ G+C    
Sbjct: 313 MILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKN 372

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N+A  L   M  MG   +V +++ LI G+C+      A  L+  M   G  P++     
Sbjct: 373 INKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAV 432

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL + + +  A  L   M++  +  +   Y   +DG+C  G +  A ELF +L    
Sbjct: 433 ILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++++  Y  +I GLCK G L  A +L  ++     + +  TYN+ +  L    ++ ++
Sbjct: 493 LQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARS 551



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 142/283 (50%), Gaps = 6/283 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A ++   + + G  P+VFTYN+LI+  C       A+ +F  M +  G       P+ 
Sbjct: 304 MQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVS-RGRL-----PDI 357

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V +T++I G CK+  ++KA  L  +M      P+V T+ +LI GFC A     AK LF+ 
Sbjct: 358 VVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLN 417

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PN+ +  VI++ LCK   + EA  L + M +  +  N  +Y+ L+DG C  G+
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A ELF S+   G + NV+ Y+I+I G CK   ++ A  L   M   G  P+   YN 
Sbjct: 478 LNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNV 537

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
              GL    ++ R+ K    M+  G + D       I+ L  N
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYLSTN 580



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 154/330 (46%), Gaps = 9/330 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           EA +L  ++   G  P++   N L++  C+ G  + A ++   M   G G       P+ 
Sbjct: 270 EAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEG-------PDV 322

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY ++I   C +  +++A  +F  M      P++V + SLIHG+C   + N+A  L  E
Sbjct: 323 FTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEE 382

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+V ++  ++   C+ G+   A  L   M + G  PN      ++DG C    
Sbjct: 383 MSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENL 442

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  L  +ME      N+  YSIL++G C   ++  A  L+S +  KG++ +V IY  
Sbjct: 443 LSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTI 502

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +   +++A  L   M+ +G   +   Y  F+ GL     I  +++    +R   
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562

Query: 301 YELDIRAYNCLIDGLCKS-GRLKIAWELFR 329
           + +D      +I+ L  + G  KI   LFR
Sbjct: 563 FSVDAATTEFIINYLSTNEGDTKIREFLFR 592



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 150/331 (45%), Gaps = 7/331 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVV 96
           AL+LF+ MA       +   P+   +T ++  + +      A  L   M     I  + +
Sbjct: 60  ALDLFQGMAR------MKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTI 113

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           T N +I+  C          +   M   G++P V++   ++N LC  G + +A  L + M
Sbjct: 114 TLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHM 173

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            ++    + + Y  L++G C TG    A      ME    K NV  YS +++G CK+  +
Sbjct: 174 EKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLV 233

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             AL+L SEM  KG++P++V Y  L  GL    + + A  L DEM + G+  D       
Sbjct: 234 SEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNIL 293

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +D  CK G +++A  +   + +     D+  YN LI   C   ++  A  +F  +     
Sbjct: 294 VDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGR 353

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + D+V +  +IH  C D  ++KA  L  +M 
Sbjct: 354 LPDIVVFTSLIHGWCKDKNINKAMHLLEEMS 384



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 4/202 (1%)

Query: 172 MDGFCLTGR---VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           M   C +G+   ++ A +LF  M  M    +V  +++L+    + K    A+SL   M S
Sbjct: 45  MRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFS 104

Query: 229 K-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
             GI+ D +  N +   L  +  V   F +   M + G+        T I+GLC  G + 
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVA 164

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +AV L   +  + Y LD+  Y  LI+GLCK+G    A    R +       +VV Y+ ++
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIM 224

Query: 348 HALCADGKMDKARDLFLDMEAK 369
             LC DG + +A +L  +M  K
Sbjct: 225 DGLCKDGLVSEALNLCSEMNGK 246


>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  263 bits (673), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 145/366 (39%), Positives = 214/366 (58%), Gaps = 21/366 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA      +   G   N  +Y TLINGLC+ G T  AL +  ++       G +   + V
Sbjct: 159 EALHFHDHVLALGFHFNQVSYGTLINGLCKIGETRAALQMLRQIE------GKLVSTDVV 212

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+TIIDGLCK+  V+ A EL+ +M  + I+P VVT NSLI+G+C    + EA  L  EM
Sbjct: 213 MYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREM 272

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+V +FN++++ LCK GK+ EA   + +M++ GV P+   Y++LMDG+CL   V
Sbjct: 273 VLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEV 332

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A+ +               YSI+ING+CK K ++ ALSL+ EM  + I PD V YN+L
Sbjct: 333 NKAKHV---------------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++  A++L DEM+  G  AD   Y + ID LCKN ++ +A+ L + ++    
Sbjct: 378 IDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGI 437

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LD+  YN LIDGLCK GRLK A  +F+ L        V TY IMI+ LC +G +++A  
Sbjct: 438 QLDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAET 497

Query: 362 LFLDME 367
           L   ME
Sbjct: 498 LLSKME 503



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 165/336 (49%), Gaps = 22/336 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++      P V T N+LI G C  G    A  L  EM   N        P+  
Sbjct: 229 DAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKN------INPDVY 282

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D LCKEG + +AK     M  E + P+VVTY+SL+ G+C  N+ N+AK +    
Sbjct: 283 TFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHV---- 338

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                      +++++N  CK   +D+A  L   M    + P+   YN+L+DG C +GR+
Sbjct: 339 -----------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRI 387

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M   G   ++ +Y+ LI+  CKN  ++ A++L  ++  +GI+ D+  YN L
Sbjct: 388 SYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQLDMYTYNIL 447

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A  +F ++   G     W Y   I+GLC  G + EA  L   +     
Sbjct: 448 IDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETLLSKMEDNGC 507

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             D      +I  L ++ + + A +L R +  RG+L
Sbjct: 508 VPDAVTCETIIRALFENDKNERAEKLLREMIARGLL 543



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 153/374 (40%), Gaps = 90/374 (24%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD     F +M   N  P+V+ +  ++        +     LF ++   G++PN+VS ++
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C  G+M  A  +   ++++G  PN     TL+ GFCL  +V  A      + ++G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 196 CKHNVFSYSILINGYCKN----------KEIEGAL------------------------- 220
              N  SY  LING CK           ++IEG L                         
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            LYSEM++K I P VV  N+L  G   + Q + AF L  EM    +  D + +   +D L
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDAL 291

Query: 281 CKNGYIVEA------------------------------------------------VEL 292
           CK G I EA                                                +++
Sbjct: 292 CKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVNKAKHVYSIVINGFCKIKM 351

Query: 293 FRTLRILKYELDIR-------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
                 L YE+  R        YN LIDGLCKSGR+  AWEL   +      AD++TYN 
Sbjct: 352 VDKALSLFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNS 411

Query: 346 MIHALCADGKMDKA 359
           +I ALC +  +DKA
Sbjct: 412 LIDALCKNHHVDKA 425



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 104/224 (46%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+       M+ +   P+   +  ++              LF  +E  G K N+ S SI
Sbjct: 52  VDDLVSSFHRMLLLNPAPSVIEFGKILSSLVKLKHYPTVISLFYQLEFNGIKPNIVSLSI 111

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN YC   ++  A S+++++L  G  P+ +   TL  G    H+V+ A    D +   G
Sbjct: 112 LINCYCHLGQMRFAFSIFAKILKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALG 171

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +  +Y T I+GLCK G    A+++ R +       D+  Y+ +IDGLCK   +  A+
Sbjct: 172 FHFNQVSYGTLINGLCKIGETRAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAY 231

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           EL+  +    +   VVT N +I+  C  G+  +A  L  +M  K
Sbjct: 232 ELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMVLK 275


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 146/366 (39%), Positives = 206/366 (56%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF  +   G +PNV +Y+ +I GLCR G T   + L E M        V C+P+ V
Sbjct: 179 RAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKV------VGCEPDVV 232

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TI+D LCK+  V++A  +F KMK   I P VVTY SLIHG      W EA  L  EM
Sbjct: 233 IYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEM 292

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P++V+F+V+++ +CK G++ EA  +L+ M ++GV P+   YNTLM+G+CL   V
Sbjct: 293 KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEV 352

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  M S G   +VFS+SIL+NGYCK K I+ A  L+ EM  +G+ PD V YNTL
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTL 412

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +   A +LF +M  +G   +   Y   +D L K GY+ +A+ LFR +     
Sbjct: 413 ISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGL 472

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  YN +IDG+CK G+ K A ELF  L    L  +       I  +C  G +D+A  
Sbjct: 473 KPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHK 532

Query: 362 LFLDME 367
            F  ME
Sbjct: 533 AFRQME 538



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/362 (36%), Positives = 196/362 (54%), Gaps = 8/362 (2%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTII 67
           K+   G EPNV T++TLING C  G    A+ LF+ M A G        KPN  +Y+ II
Sbjct: 151 KIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY-------KPNVHSYSIII 203

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GLC+ G   +  +L   MK     P+VV YN+++   C     NEA  +F +M   G+ 
Sbjct: 204 KGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGIL 263

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P VV++  +++ L   G+  EA  LL  M    + P+   ++ L+D  C  G V+ A  +
Sbjct: 264 PTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVI 323

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
             +M  MG + +V +Y+ L+NGYC   E+  A  ++  M+SKG  PDV  ++ L  G  +
Sbjct: 324 LKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCK 383

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             +++ A +LFDEM   G+  DT +Y T I GLC+    +EA ELF+ +    Y  ++  
Sbjct: 384 AKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVT 443

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y+ L+D L K G L  A  LFR++    L  D+VTYNIMI  +C  GK   AR+LF ++ 
Sbjct: 444 YSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELS 503

Query: 368 AK 369
            K
Sbjct: 504 VK 505



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 179/332 (53%), Gaps = 6/332 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L   ++V GCEP+V  YNT+++ LC+      A+++F +M  G G       P  V
Sbjct: 214 EVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKM-KGTGIL-----PTVV 267

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I GL   G   +A  L  +MK  NI P++V ++ LI   C   + +EA+ +   M
Sbjct: 268 TYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTM 327

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV+P+V ++N +MN  C   ++ EA ++ E+MI  G  P+ F ++ L++G+C   R+
Sbjct: 328 TEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRI 387

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A++LF  M   G   +  SY+ LI+G C+ +    A  L+ +M S G  P++V Y+ L
Sbjct: 388 DEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSIL 447

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   +++A  LF  M+  G+  D   Y   IDG+CK G   +A ELF  L +   
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
           + +       IDG+CK G L  A + FR + +
Sbjct: 508 QPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 157/329 (47%), Gaps = 35/329 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A   F  M + N  P++V +  L         +     L  +M   G+  +V+S  +
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+   +D    +L  +I++G+ PN   ++TL++GFC+ G++ RA ELF  M + G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT--------------- 240
            K NV SYSI+I G C+  +    + L   M   G +PDVVIYNT               
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 241 --------------------LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
                               L  GL  + + + AF L +EM+   +  D  A+   ID +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G + EA  + +T+  +  E D+  YN L++G C    +  A ++F  +     + DV
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +++I+++  C   ++D+A+ LF +M  +
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHR 400



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 124/232 (53%), Gaps = 6/232 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   G EP+V TYNTL+NG C     + A  +FE M +  G       P+  
Sbjct: 319 EARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMIS-KGRM-----PDVF 372

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +++ +++G CK   +D+AK+LF +M    + P+ V+YN+LI G C A    EA+ LF +M
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM 432

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN+V+++++++ L K G +D+A  L   M   G++P+   YN ++DG C  G+ 
Sbjct: 433 HSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKF 492

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             A ELF  +   G + N +  +  I+G CK   ++ A   + +M      P
Sbjct: 493 KDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/196 (32%), Positives = 109/196 (55%), Gaps = 6/196 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F  +   G  P+VF+++ L+NG C+      A  LF+EM +     G++  P+T
Sbjct: 353 VEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR----GLI--PDT 406

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+I GLC+     +A+ELF  M      PN+VTY+ L+         ++A  LF  
Sbjct: 407 VSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRA 466

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G++P++V++N++++ +CK GK  +A  L   +   G++PN +V    +DG C  G 
Sbjct: 467 MENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGL 526

Query: 181 VNRAEELFVSMESMGC 196
           ++ A + F  ME   C
Sbjct: 527 LDEAHKAFRQMEKDDC 542



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 61/128 (47%), Gaps = 6/128 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   G  PN+ TY+ L++ L + G+   A+ LF  M N         KP+ 
Sbjct: 423 LEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSG------LKPDL 476

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +IDG+CK G    A+ELF ++  + + PN       I G C     +EA   F +
Sbjct: 477 VTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQ 536

Query: 121 MMDQGVQP 128
           M      P
Sbjct: 537 MEKDDCSP 544



 Score = 58.9 bits (141), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 71/154 (46%)

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + I  ALS ++ M++    P +V +  LF  L  +   +    L  +M+  G++ D  + 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I+  C+  ++     +   +  L  E ++  ++ LI+G C  G++  A ELF  +  
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                +V +Y+I+I  LC  GK  +   L   M+
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMK 223


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 141/359 (39%), Positives = 214/359 (59%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           KL   G + +  +Y TLING+C+ G T  A+ L  ++       G + KPN   Y TIID
Sbjct: 154 KLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID------GRLTKPNVEMYNTIID 207

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK   V +A  LF +M  + I+ +VVTY +LI+GFC A+   EA  L  EM+ + + P
Sbjct: 208 ALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINP 267

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NV ++N++++ LCK GK+ EA  +L +M++  V+P+   Y+TLMDG+ L   + +A+ +F
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVF 327

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            +M  MG   +V SY+ILING+CKNK ++ AL+L+ EM  K + P +V Y++L  GL + 
Sbjct: 328 NAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKS 387

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++   + L DEM+  G+ A+   Y + IDGLCKNG++  A+ LF  ++          +
Sbjct: 388 GRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTF 447

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L+DGLCK GRLK A E F+ L       DV  YN+MI+  C  G +++A  +   ME
Sbjct: 448 TILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKME 506



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 198/365 (54%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +L + G +P++ T N LIN  C  G      ++  ++     +      P+T+T
Sbjct: 78  AVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQ------PHTIT 131

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT+I GLC +G V+KA     K+  + I  + V+Y +LI+G C   D   A  L  ++ 
Sbjct: 132 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID 191

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNV  +N I++ LCK   + EA  L   M   G+  +   Y TL+ GFC+  ++ 
Sbjct: 192 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLK 251

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M       NV++Y+IL++  CK  +++ A ++ + ML   +KPDV+ Y+TL 
Sbjct: 252 EAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLM 311

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F ++++++A  +F+ M   GV  D  +Y   I+G CKN  + EA+ LF+ +      
Sbjct: 312 DGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMV 371

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             I  Y+ LIDGLCKSGR+   W+L   +    + A+V+TYN +I  LC +G +D+A  L
Sbjct: 372 PGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIAL 431

Query: 363 FLDME 367
           F  M+
Sbjct: 432 FNKMK 436



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 183/352 (51%), Gaps = 8/352 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           +PNV  YNT+I+ LC+      A  LF EM A G          + VTYTT+I G C   
Sbjct: 196 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG-------ISADVVTYTTLIYGFCIAS 248

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            + +A  L  +M  + INPNV TYN L+   C      EAK +   M+   V+P+V++++
Sbjct: 249 KLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYS 308

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +M+      ++ +A  +   M  +GV P+   Y  L++GFC    V+ A  LF  M   
Sbjct: 309 TLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQK 368

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
                + +YS LI+G CK+  I     L  EM  +GI  +V+ YN+L  GL +   ++RA
Sbjct: 369 NMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRA 428

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             LF++M+  G+   ++ +   +DGLCK G + +A E F+ L    Y LD+  YN +I+G
Sbjct: 429 IALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMING 488

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            CK G L+ A  +   +     + + VT++I+I+AL    + DKA  L   M
Sbjct: 489 HCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQM 540



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 173/336 (51%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G   +V TY TLI G C       A+ L  EM            PN  
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK------TINPNVY 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D LCKEG V +AK +   M    + P+V+TY++L+ G+    +  +A+ +F  M
Sbjct: 271 TYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V S+ +++N  CKN  +DEA  L + M Q  + P    Y++L+DG C +GR+
Sbjct: 331 SLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRI 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +   +L   M   G   NV +Y+ LI+G CKN  ++ A++L+++M  +GI+P    +  L
Sbjct: 391 SYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A + F ++   G   D + Y   I+G CK G + EA+ +   +     
Sbjct: 451 LDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGC 510

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP-RGVL 336
             +   ++ +I+ L K      A +L R +  RG+L
Sbjct: 511 VPNAVTFDIIINALFKKDENDKAEKLLRQMICRGLL 546



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 149/288 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A   F +M      P ++ +N ++  F     ++ A  L   +  +G+QP++++ N+
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C  G++     +L  +++ G +P+   + TL+ G CL G+VN+A      + + G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K +  SY  LING CK  +  GA+ L  ++  +  KP+V +YNT+   L +   V  A+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++AD   Y T I G C    + EA+ L   + +     ++  YN L+D L
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           CK G++K A  +   + +  +  DV+TY+ ++       ++ KA+ +F
Sbjct: 280 CKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVF 327



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 157/312 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+D   K      A  L  +++ + I P+++T N LI+ FC+         +
Sbjct: 57  PPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSV 116

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++ +G QP+ ++F  ++  LC  G++++A    + ++  G++ +   Y TL++G C 
Sbjct: 117 LAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCK 176

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +L   ++    K NV  Y+ +I+  CK + +  A  L+SEM +KGI  DVV 
Sbjct: 177 IGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVT 236

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G     +++ A  L +EM    +  + + Y   +D LCK G + EA  +   + 
Sbjct: 237 YTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVML 296

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+  Y+ L+DG      LK A  +F ++    +  DV +Y I+I+  C +  +D
Sbjct: 297 KACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVD 356

Query: 358 KARDLFLDMEAK 369
           +A +LF +M  K
Sbjct: 357 EALNLFKEMHQK 368



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 121/255 (47%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A   F  M+     P ++ FN I++   K      A  L   +   G++P+    N L
Sbjct: 41  DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNIL 100

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC  G++     +   +   G + +  +++ LI G C   ++  AL  + ++L++GI
Sbjct: 101 INCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGI 160

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           K D V Y TL  G+ +I     A KL  ++       +   Y T ID LCK   + EA  
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LF  +       D+  Y  LI G C + +LK A  L   +    +  +V TYNI++ ALC
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 352 ADGKMDKARDLFLDM 366
            +GK+ +A+++   M
Sbjct: 281 KEGKVKEAKNVLAVM 295



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 111/224 (49%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A      M+ +   P    +N ++D F      + A  L   +E  G + ++ + +I
Sbjct: 40  VDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNI 99

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN +C   +I    S+ +++L +G +P  + + TL  GL    QV +A    D++   G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 159

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D  +Y T I+G+CK G    A++L R +     + ++  YN +ID LCK   +  A+
Sbjct: 160 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 219

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LF  +    + ADVVTY  +I+  C   K+ +A  L  +M  K
Sbjct: 220 GLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLK 263



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/156 (20%), Positives = 61/156 (39%)

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + ++ A+S ++ ML     P ++ +N +     +I     A  L   ++  G+  D    
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I+  C  G I     +   +    Y+     +  LI GLC  G++  A      L  
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +  D V+Y  +I+ +C  G    A  L   ++ +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGR 193


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/354 (38%), Positives = 202/354 (57%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +V TY  LINGLC+ G T  A+    +M   N        PN V Y+T++DGLCK+
Sbjct: 176 GYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWN------PNVVVYSTVMDGLCKD 229

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  L L+M  + I PN+VTY  LI G C    W EA  L  EMM  GV P++ S 
Sbjct: 230 GLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSL 289

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LCK GK+ +A  ++  MI +G  P+ F YN+L+D +CL  +++ A  +F  M S
Sbjct: 290 NILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVS 349

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  ++ +Y+ LI+G+CK K I  A+ L  EM+  G  PDVV + TL  G  ++ +   
Sbjct: 350 RGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLA 409

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LF  M ++G   +       +DGLCK+  + EA+ LF  +     +L+I  Y+ ++D
Sbjct: 410 AKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILD 469

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+C +G+L  A ELF  LP   L  +V  Y IMI+     G +DKA DL  +ME
Sbjct: 470 GMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNME 523



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 178/358 (49%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+      PNV  Y+T+++GLC+ G    AL L  EM+ G G      KPN V
Sbjct: 199 EAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMS-GKG-----IKPNLV 252

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I GLC  G   +A  L  +M    + P++ + N L+   C      +AK +   M
Sbjct: 253 TYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFM 312

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+V ++N +++  C   +MDEA+R+ ELM+  G  P+   Y +L+ G+C    +
Sbjct: 313 ILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNI 372

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A  L   M  +G   +V +++ LI G+C+      A  L+  M   G  P++     +
Sbjct: 373 NKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAII 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +  A  LF  M++  +  +   Y   +DG+C  G +  A+ELF  L     
Sbjct: 433 LDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGL 492

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++++ AY  +I+G  K G L  A +L  ++     + D  TYN+ +  L A+ ++ ++
Sbjct: 493 QINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARS 550



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 144/283 (50%), Gaps = 6/283 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A ++   + + G  P+VFTYN+LI+  C       A  +FE M +        C P+ 
Sbjct: 303 MQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRG------CLPDI 356

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT++I G CK   ++KA  L  +M      P+VVT+ +LI GFC       AK LF+ 
Sbjct: 357 VAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLN 416

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PN+ +  +I++ LCK+  + EA  L   M +  +  N  +Y+ ++DG C  G+
Sbjct: 417 MHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGK 476

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A ELF  + + G + NV++Y+I+ING+ K   ++ A  L S M   G  PD   YN 
Sbjct: 477 LNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNV 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
              GL    ++ R+ K    M+  G + D       I+ L  N
Sbjct: 537 FVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTN 579



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 155/330 (46%), Gaps = 7/330 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVV 96
           ALN F  MA  N        P+ + +T ++  + K      A  L  +M     I P+  
Sbjct: 59  ALNFFHTMAKMNP------LPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTF 112

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
             N +I+  C+         +   M+  G++P+VV+F +++N LC  G +  A  L++ +
Sbjct: 113 ILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHV 172

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            + G R +   Y  L++G C  G+ + A      ME      NV  YS +++G CK+  +
Sbjct: 173 EKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLV 232

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             AL L  EM  KGIKP++V Y  L  GL    + + A  L DEM + GV  D  +    
Sbjct: 233 SEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNIL 292

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +D LCK G I++A  +   + ++    D+  YN LID  C   ++  A  +F  +     
Sbjct: 293 VDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGC 352

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + D+V Y  +IH  C    ++KA  L  +M
Sbjct: 353 LPDIVAYTSLIHGWCKIKNINKAMHLLDEM 382



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 160/343 (46%), Gaps = 29/343 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM---------ANGNGEF 52
           EA  L +++   G +PN+ TY  LI GLC  G    A +L +EM          + N   
Sbjct: 234 EALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILV 293

Query: 53  GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            V+CK                    P+  TY ++ID  C +  +D+A  +F  M      
Sbjct: 294 DVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCL 353

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++V Y SLIHG+C   + N+A  L  EM+  G  P+VV++  ++   C+ G+   A  L
Sbjct: 354 PDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKEL 413

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M + G  PN      ++DG C +  ++ A  LF +ME      N+  YSI+++G C 
Sbjct: 414 FLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCS 473

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++  AL L+S + +KG++ +V  Y  +  G  +   +++A  L   M+ +G   D+  
Sbjct: 474 AGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCT 533

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           Y  F+ GL     I  +++    +R   + +D      +I+ L
Sbjct: 534 YNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/213 (30%), Positives = 106/213 (49%), Gaps = 6/213 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  P+V T+ TLI G C+ G  + A  LF  M     ++G V  PN  
Sbjct: 374 KAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMH----KYGQV--PNLQ 427

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   I+DGLCK   + +A  LF  M+  N++ N+V Y+ ++ G C A   N A  LF  +
Sbjct: 428 TCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCL 487

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+Q NV ++ +++N   K G +D+A  LL  M + G  P++  YN  + G      +
Sbjct: 488 PAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREI 547

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            R+ +    M   G   +  +  ++IN    N+
Sbjct: 548 ARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQ 580



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 4/216 (1%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEE---LFVSMESMGCKHNVFSYSILINGYCKNK 214
           +I    N   +   M   C +G++   +E    F +M  M    +V  +++L+    K K
Sbjct: 30  EIQSHSNKTQFLNFMRNQCKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMK 89

Query: 215 EIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
               A+SL  EM S  GIKPD  I N +   L  +  V   F +   M + G+      +
Sbjct: 90  HYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTF 149

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I+GLC  G +  AVEL   +    Y  D++ Y  LI+GLCK G+   A    R +  
Sbjct: 150 TILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEE 209

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                +VV Y+ ++  LC DG + +A  L L+M  K
Sbjct: 210 RNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGK 245


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/359 (38%), Positives = 215/359 (59%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           KL   G + N  +Y TLING+C+ G T  A+ L  ++       G + KPN   Y+TIID
Sbjct: 402 KLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID------GRLTKPNVEMYSTIID 455

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK   V +A  LF +M  + I+ +VVTY++LI+GFC      EA  L  EM+ + + P
Sbjct: 456 ALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINP 515

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +V ++ ++++ L K GK+ EA  +L +M++  V+P+ F YNTLM+G+ L   V +A+ +F
Sbjct: 516 DVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVF 575

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            +M  MG   +V +Y+ILING+CK+K ++ AL+L+ EM  K + PD V Y++L  GL + 
Sbjct: 576 NAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKS 635

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++   + L DEM+  G  AD   Y + IDGLCKNG++ +A+ LF  ++      +   +
Sbjct: 636 GRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTF 695

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L+DGLCK GRLK A E+F+ L       DV  YN+MI+  C  G +++A  +   ME
Sbjct: 696 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKME 754



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 141/437 (32%), Positives = 213/437 (48%), Gaps = 75/437 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     KL   G + N  +Y TLING+CR G T  A+    ++       G + KPN  
Sbjct: 81  EALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKID------GRLAKPNVE 134

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LCK   V +A  LF +M  + I+ NVVTY++LI+GFC      EA  L   M
Sbjct: 135 MYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVM 194

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNV ++N++++ LCK GK+ EA  +L +M++  V+ N   Y+TLMDG+ L   V
Sbjct: 195 VLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEV 254

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-------------- 227
            +A+ +F +M  MG   +V SY+I+ING+CK K ++ AL+L+ EM+              
Sbjct: 255 KKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKIL 314

Query: 228 --------------------SKGIKPDV-------------------------------- 235
                                KGI+PD+                                
Sbjct: 315 DSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYP 374

Query: 236 ---VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
              V  NTL  GL    QV++A    D++   G   +  +Y T I+G+CK G    A++L
Sbjct: 375 PSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKL 434

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
            R +     + ++  Y+ +ID LCK   +  A+ LF  +    + ADVVTY+ +I+  C 
Sbjct: 435 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 494

Query: 353 DGKMDKARDLFLDMEAK 369
            GK+ +A  L  +M  K
Sbjct: 495 VGKLKEAIGLLNEMVLK 511



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +L + G +P++FT N LIN  C  G      ++  ++            P+TVT
Sbjct: 326 AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG------YPPSTVT 379

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T+I GLC +G V KA     K+  +    N V+Y +LI+G C   D   A  L  ++ 
Sbjct: 380 LNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKID 439

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNV  ++ I++ LCK   + EA  L   M   G+  +   Y+TL+ GFC+ G++ 
Sbjct: 440 GRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLK 499

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M       +V +Y+IL++   K  +++ A S+ + ML   +KPDV  YNTL 
Sbjct: 500 EAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLM 559

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   +++V++A  +F+ M   GV  D   Y   I+G CK+  + EA+ LF+ +      
Sbjct: 560 NGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMV 619

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y+ L+DGLCKSGR+   W+L   +      ADV+TYN +I  LC +G +DKA  L
Sbjct: 620 PDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIAL 679

Query: 363 FLDME 367
           F  M+
Sbjct: 680 FNKMK 684



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++  K+   G  P+  T NTLI GLC  G    AL+  +++     +       N V+Y 
Sbjct: 363 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQL------NQVSYA 416

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G+CK G    A +L  K+      PNV  Y+++I   C     +EA  LF EM  +
Sbjct: 417 TLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVK 476

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+  +VV+++ ++   C  GK+ EA  LL  M+   + P+   Y  L+D     G+V  A
Sbjct: 477 GISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEA 536

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + +   M     K +VF+Y+ L+NGY    E++ A  +++ M   G+ PDV  Y  L  G
Sbjct: 537 KSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILING 596

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   V+ A  LF EM +  +  DT  Y + +DGLCK+G I    +L   +R      D
Sbjct: 597 FCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPAD 656

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  YN LIDGLCK+G L  A  LF  +    +  +  T+ I++  LC  G++  A+++F 
Sbjct: 657 VITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQ 716

Query: 365 DMEAK 369
           D+  K
Sbjct: 717 DLLTK 721



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 182/354 (51%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PNV  Y+T+I+ LC+      A  LF EM             + VTY+T+I G C  G 
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG------ISADVVTYSTLIYGFCIVGK 497

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A  L  +M  + INP+V TY  L+          EAK +   M+   V+P+V ++N 
Sbjct: 498 LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNT 557

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +MN      ++ +A  +   M  +GV P+   Y  L++GFC +  V+ A  LF  M    
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN 617

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +  +YS L++G CK+  I     L  EM  +G   DV+ YN+L  GL +   +++A 
Sbjct: 618 MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAI 677

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF++M+  G+  +T+ +   +DGLCK G + +A E+F+ L    Y LD+  YN +I G 
Sbjct: 678 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGH 737

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G L+ A  +   +     I + VT++I+I+AL    + DKA  L   M A+
Sbjct: 738 CKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIAR 791



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 181/369 (49%), Gaps = 9/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK-PNT 60
           +A  +F  + + G  P+V +YN +ING C+      ALNLF+EM        ++ + P  
Sbjct: 256 KAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM--------ILSRFPPI 307

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + +  I+D   K      A  L  +++ + I P++ T N LI+ FC+         +  +
Sbjct: 308 IQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAK 367

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +G  P+ V+ N ++  LC  G++ +A    + ++  G + N   Y TL++G C  G 
Sbjct: 368 ILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGD 427

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +L   ++    K NV  YS +I+  CK + +  A  L+SEM  KGI  DVV Y+T
Sbjct: 428 TRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYST 487

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   + +++ A  L +EM    +  D   Y   +D L K G + EA  +   +    
Sbjct: 488 LIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKAC 547

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D+  YN L++G      +K A  +F ++    +  DV TY I+I+  C    +D+A 
Sbjct: 548 VKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEAL 607

Query: 361 DLFLDMEAK 369
           +LF +M  K
Sbjct: 608 NLFKEMHQK 616



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 146/251 (58%), Gaps = 6/251 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+VFTYNTL+NG         A ++F  M+      GV   P+  TYT +I+G CK   
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMS----LMGVT--PDVHTYTILINGFCKSKM 602

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD+A  LF +M  +N+ P+ VTY+SL+ G C +   +    L  EM D+G   +V+++N 
Sbjct: 603 VDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNS 662

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCKNG +D+A  L   M   G+RPN F +  L+DG C  GR+  A+E+F  + + G
Sbjct: 663 LIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKG 722

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +V+ Y+++I G+CK   +E AL++ S+M   G  P+ V ++ +   LF+  + ++A 
Sbjct: 723 YHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAE 782

Query: 256 KLFDEMQRHGV 266
           KL  +M   G+
Sbjct: 783 KLLRQMIARGL 793



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 131/230 (56%), Gaps = 6/230 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  + + G  P+V TY  LING C++     ALNLF+EM   N        P+TV
Sbjct: 570 KAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN------MVPDTV 623

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++DGLCK G +    +L  +M+D     +V+TYNSLI G C     ++A  LF +M
Sbjct: 624 TYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKM 683

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            DQG++PN  +F ++++ LCK G++ +A  + + ++  G   + ++YN ++ G C  G +
Sbjct: 684 KDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLL 743

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
             A  +   ME  GC  N  ++ I+IN   K  E + A  L  +M+++G+
Sbjct: 744 EEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/299 (31%), Positives = 155/299 (51%), Gaps = 1/299 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+TVT  T+I GLC +G V +A     K+  +    N V+Y +LI+G C   D   A   
Sbjct: 61  PDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKF 120

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             ++  +  +PNV  +N I++ LCK   + EA  L   M   G+  N   Y+TL+ GFC+
Sbjct: 121 LRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCI 180

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++  A  L   M       NV +Y+IL++  CK  +++ A S+ + ML   +K +V+ 
Sbjct: 181 VGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVIT 240

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+TL  G F +++V++A  +F+ M   GV  D  +Y   I+G CK   + +A+ LF+ + 
Sbjct: 241 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMI 300

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           + ++   I  +N ++D   K      A  L   L    +  D+ T NI+I+  C  G++
Sbjct: 301 LSRFP-PIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQI 358



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 126/250 (50%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +++ +G  P+ V+ N ++  LC  G++ EA    + ++  G + N   Y TL++G C
Sbjct: 50  VLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVC 109

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G    A +    ++    K NV  Y+ +I+  CK + +  A  L+SEM  KGI  +VV
Sbjct: 110 RIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVV 169

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y+TL  G   + +++ A  L + M    +  +   Y   +D LCK G + EA  +   +
Sbjct: 170 TYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVM 229

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + ++  Y+ L+DG      +K A  +F ++    +  DV +YNIMI+  C   ++
Sbjct: 230 LKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRV 289

Query: 357 DKARDLFLDM 366
           DKA +LF +M
Sbjct: 290 DKALNLFKEM 299



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 77/145 (53%)

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           +LS+ +++L +G  PD V  NTL  GL    QV+ A    D++   G   +  +Y T I+
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G+C+ G    A++  R +     + ++  YN +ID LCK   +  A+ LF  +    + A
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 339 DVVTYNIMIHALCADGKMDKARDLF 363
           +VVTY+ +I+  C  GK+ +A  L 
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLL 191


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/356 (39%), Positives = 212/356 (59%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +  +Y TLINGLC+ G T  AL L  ++       G +C+P+ V Y TIIDGLCK+
Sbjct: 149 GIKLDHVSYGTLINGLCKIGQTGPALRLLRKIE------GEICRPDVVMYNTIIDGLCKD 202

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V  A +L+ +M ++ + PNVVTY SLI+GFC     ++A  L  EM+ + V PNV +F
Sbjct: 203 KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTF 262

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK GKM EA  L+ +M++ GV P+ F YN LMDG+ L     +A+ +F  M  
Sbjct: 263 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           MG   +V SYS++I+G  K K ++ A+ L+  M ++ + PDVV Y++L  GL +  ++  
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINS 382

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K  DEM   G   +   Y + ID LCK+  + +A+ L + ++    + ++  YN L+D
Sbjct: 383 ALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVD 442

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GLCK GRL  A ++F+ L       DVVTY+IMI+ LC +   D+A  L   ME K
Sbjct: 443 GLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDK 498



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 192/364 (52%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  K+    C P+V  YNT+I+GLC+      A +L+ EM      F     PN VT
Sbjct: 173 ALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEM------FEKRVFPNVVT 226

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT++I G C  G +DKA  L  +M  +N+NPNV T+N+L+ G C      EAK L   MM
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV P+V ++N +M+      +  +A  +  +M Q+GV  +   Y+ ++ G      ++
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +LF  M +     +V +YS LI+G CK+  I  AL    EM  +G  P+V+ Y +L 
Sbjct: 347 EAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLI 406

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L + HQV++A  L  +++  G+ A+ + Y   +DGLCK+G + +A ++F+ L +  + 
Sbjct: 407 DALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHN 466

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           +D+  Y+ +I+GLCK      A  L   +     + D + Y  +I+A       DKA  L
Sbjct: 467 VDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKL 526

Query: 363 FLDM 366
             +M
Sbjct: 527 LREM 530



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 188/354 (53%), Gaps = 6/354 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF ++ + G + N  T N LIN  C       A ++F ++     + G   +P+ +TYTT
Sbjct: 71  LFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKIL----KLGY--QPDIITYTT 124

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GLC  G V ++     ++  + I  + V+Y +LI+G C       A  L  ++  + 
Sbjct: 125 LIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEI 184

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +P+VV +N I++ LCK+  + +A  L   M +  V PN   Y +L+ GFC+ G++++A 
Sbjct: 185 CRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAF 244

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M       NV +++ L++G CK  ++  A SL + M+ +G+ PDV  YN L  G 
Sbjct: 245 GLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGY 304

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           F + +  +A  +F+ M + GV  D  +Y   I GL K   + EA++LF  +R      D+
Sbjct: 305 FLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDV 364

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            AY+ LIDGLCKSGR+  A +    +       +V+TY  +I ALC   ++DKA
Sbjct: 365 VAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKA 418



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 156/310 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+  L K         LF +M+   I  N +T N LI+ +C+    N A  +
Sbjct: 47  PPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSV 106

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +++  G QP+++++  ++  LC NG++ E+    + ++  G++ +   Y TL++G C 
Sbjct: 107 FAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCK 166

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+   A  L   +E   C+ +V  Y+ +I+G CK+K +  A  LY EM  K + P+VV 
Sbjct: 167 IGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVT 226

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y +L  G   + Q+++AF L +EM    V  +   + T +DGLCK G + EA  L   + 
Sbjct: 227 YTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMM 286

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN L+DG         A  +F  + +  +  DV +Y++MI  L     +D
Sbjct: 287 KEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLD 346

Query: 358 KARDLFLDME 367
           +A DLF  M 
Sbjct: 347 EAMDLFEGMR 356



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 156/291 (53%), Gaps = 33/291 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIVALNLFEEMA---------- 46
           +A  L  ++ +    PNV T+NTL++GLC+ G      ++VA+ + E +           
Sbjct: 242 KAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALM 301

Query: 47  ----------------NGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                           N   + GV C  +  +Y+ +I GL K   +D+A +LF  M++EN
Sbjct: 302 DGYFLVKEAGKAKNVFNIMAQMGVTC--DVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN 359

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P+VV Y+SLI G C +   N A     EM D+G  PNV+++  +++ LCK+ ++D+A 
Sbjct: 360 VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAI 419

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            LL+ +   G++ N + YN L+DG C  GR+  A+++F  +   G   +V +YSI+ING 
Sbjct: 420 ALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGL 479

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           CK    + AL+L S+M  KG  PD + Y T+    FE    ++A KL  EM
Sbjct: 480 CKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 123/226 (54%), Gaps = 6/226 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   G   +V +Y+ +I+GL +      A++LFE M N N        P+ V
Sbjct: 312 KAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN------VIPDVV 365

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+++IDGLCK G ++ A +   +M D    PNV+TY SLI   C ++  ++A  L  ++
Sbjct: 366 AYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKI 425

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            DQG+Q N+ ++N++++ LCK+G++ +A ++ + ++  G   +   Y+ +++G C     
Sbjct: 426 KDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLF 485

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           + A  L   ME  GC  +  +Y  +IN + +    + A  L  EM+
Sbjct: 486 DEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMI 531



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 139/281 (49%), Gaps = 1/281 (0%)

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           + L+ +  +I PN     S  H F    + N+A   F  M+     P ++ F  I+  L 
Sbjct: 2   VILRFRFHSIIPNSTLLLSHTH-FHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLV 60

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K         L + M   G++ N    N L++ +C   ++N A  +F  +  +G + ++ 
Sbjct: 61  KTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDII 120

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI G C N +++ +L+ +  ++S+GIK D V Y TL  GL +I Q   A +L  ++
Sbjct: 121 TYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKI 180

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           +      D   Y T IDGLCK+  + +A +L+  +   +   ++  Y  LI G C  G+L
Sbjct: 181 EGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQL 240

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             A+ L   +    +  +V T+N ++  LC +GKM +A+ L
Sbjct: 241 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSL 281



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 86/189 (45%)

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A + F  M  M     +  +  ++    K K     + L+  M   GI+ + +  N 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L      + Q+  AF +F ++ + G   D   Y T I GLC NG + E++     L    
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +LD  +Y  LI+GLCK G+   A  L R +   +   DVV YN +I  LC D  +  A 
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 361 DLFLDMEAK 369
           DL+ +M  K
Sbjct: 210 DLYCEMFEK 218



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 6/122 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  K++  G + N++TYN L++GLC+ G    A  +F+++        VV      
Sbjct: 417 KAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVV------ 470

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+GLCKE   D+A  L  KM+D+   P+ + Y ++I+ F   +  ++A+ L  EM
Sbjct: 471 TYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530

Query: 122 MD 123
           +D
Sbjct: 531 ID 532


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  261 bits (668), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 140/366 (38%), Positives = 205/366 (56%), Gaps = 5/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AA     L   G + N +TY  +INGLC+ G T  A+   E++   N +  VV     +
Sbjct: 159 RAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVV-----I 213

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+TI+D LCK+G V +A  LF  M  + I P++V YNSLIHG C    W EA  L   M
Sbjct: 214 AYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNM 273

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV +FNV+++  CK+G +  A  ++  M+ +GV P+   YN+++ G CL  ++
Sbjct: 274 MRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQM 333

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  M   G   N+ +YS LI+G+CK K I  AL L  EM++ G+ PDVV ++TL
Sbjct: 334 GDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  + E A +LF  M  H    +       +DGL K  +  EA+ LFR +  +  
Sbjct: 394 IGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNL 453

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           EL++  YN ++DG+C  G+L  A ELF  LP   +  DVV Y  MI  LC +G +D A +
Sbjct: 454 ELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAEN 513

Query: 362 LFLDME 367
           L + ME
Sbjct: 514 LLMKME 519



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/364 (29%), Positives = 185/364 (50%), Gaps = 7/364 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +   G +P++  YN+LI+GLC  G    A  L   M       G++  PN  
Sbjct: 230 EALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRK----GIM--PNVQ 283

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D  CK+G + +AK +   M    + P+VVTYNS+I G C  +   +A  +F  M
Sbjct: 284 TFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELM 343

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PN+V+++ +++  CK   +++A  LL  M+  G+ P+   ++TL+ GFC  G+ 
Sbjct: 344 IHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKP 403

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ELF +M       N+ + +I+++G  K +    A+SL+ EM    ++ +VVIYN +
Sbjct: 404 EAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIV 463

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    ++  A +LF  +   G+  D  AY T I GLCK G + +A  L   +     
Sbjct: 464 LDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGC 523

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN  + GL +   +  + +    +    L AD  T  ++I    A+ K + A  
Sbjct: 524 LPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSAN-KENSALH 582

Query: 362 LFLD 365
           +FL 
Sbjct: 583 VFLQ 586



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 140/326 (42%), Gaps = 36/326 (11%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A   F KM   N  P    +  L         +     L   +   G++P+V +  +I
Sbjct: 53  EAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTII 112

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LC          +L +M +IGV P    + TL++G C  G V RA     S+E MG 
Sbjct: 113 INCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGH 172

Query: 197 KHNVFSYSILINGYCKNKEIEG------------------------------------AL 220
           + N ++Y  +ING CK  +  G                                    AL
Sbjct: 173 QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEAL 232

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L+S M SKGI+PD+V YN+L  GL    + + A  L   M R G+  +   +   +D  
Sbjct: 233 NLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK+G I  A  +   +  +  E D+  YN +I G C   ++  A ++F  +     + ++
Sbjct: 293 CKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNL 352

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           VTY+ +IH  C    ++KA  L  +M
Sbjct: 353 VTYSSLIHGWCKTKNINKALFLLGEM 378



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/146 (21%), Positives = 56/146 (38%)

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           K  E ALS + +M+     P    +  LF  + ++        L   +   G+  D +  
Sbjct: 50  KSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTL 109

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I+ LC   + V    +   +  +  +  +  +  LI+GLC  G +  A     SL  
Sbjct: 110 TIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLED 169

Query: 334 GVLIADVVTYNIMIHALCADGKMDKA 359
               ++  TY  +I+ LC  G    A
Sbjct: 170 MGHQSNSYTYGAIINGLCKAGDTSGA 195


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  260 bits (665), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 135/396 (34%), Positives = 226/396 (57%), Gaps = 31/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGVVC 56
           EA  +F  +   G  P+ +TY TL++G    G     H ++AL + + +   +  F ++ 
Sbjct: 243 EARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILI 302

Query: 57  K------------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           +                        PN VTYTT+ID LCK G V+ A   F +M  E ++
Sbjct: 303 RAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLS 362

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+++T+ SLIHG C   +W + + L  EM+++G+ PN +  N IM+ LCK G++ EA   
Sbjct: 363 PDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDF 422

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + +I +GV+P+   Y  L+DG+CL G+++ + +L   M S+G + +  +YS L+NGYCK
Sbjct: 423 FDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCK 482

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  ++ AL+LY EM SK +KP+ + YN +  GLF   +V  A + + ++   G+      
Sbjct: 483 NGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINT 542

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-L 331
           Y   + GLC+N ++ EA+ +F+ LR  +++L++R +N +I GL K GR+  A  LF + L
Sbjct: 543 YNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAIL 602

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           P G L+ D + Y +MI +   +G ++++ +LFL ME
Sbjct: 603 PSG-LVPDAIIYGLMIQSHIEEGLLEESDELFLSME 637



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/383 (31%), Positives = 198/383 (51%), Gaps = 22/383 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA   M    + C PNV +YN +INGL + G    A  LF EM       G    PN VT
Sbjct: 123 AAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEM------LGQGFPPNIVT 176

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDEN----------------INPNVVTYNSLIHGFC 106
           Y ++IDGLCK   +DKA+ +  +M D+                 + P+VVTY+ LI  +C
Sbjct: 177 YNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYC 236

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
                 EA+ +F  M+ +G  P+  ++  +++     G + +   LL LMIQ G+     
Sbjct: 237 KIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDH 296

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           V+N L+  +     +++A   F+ M   G   NV +Y+ +I+  CK   +E A+S +S+M
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQM 356

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           +S+G+ PD++ + +L  GL  I + ++  KL  EM   G+  +     T +D LCK G +
Sbjct: 357 VSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRV 416

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
           +EA + F  +  +  + D+ +Y  LIDG C  G++  + +L   +    L  D VTY+ +
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSAL 476

Query: 347 IHALCADGKMDKARDLFLDMEAK 369
           ++  C +G++D A  L+ +M +K
Sbjct: 477 LNGYCKNGRVDDALALYREMFSK 499



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 195/419 (46%), Gaps = 57/419 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRT----------------GHTIVALNLFEEM 45
           +A  LF ++   G  PN+ TYN++I+GLC+                 G    A+ L ++M
Sbjct: 157 KAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKM 216

Query: 46  ANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           + G        +P+ VTY+ +ID  CK G   +A+ +F  M     NP+  TY +L+HG+
Sbjct: 217 SGGG------LQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGY 270

Query: 106 C---------------------------------YAND--WNEAKCLFIEMMDQGVQPNV 130
                                             YA +   ++A   FIEM  +G  PNV
Sbjct: 271 ATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNV 330

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V++  +++ LCK G++++A      M+  G+ P+   + +L+ G C  G   + E+L   
Sbjct: 331 VTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFE 390

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M + G   N    + +++  CK   +  A   + +++  G+KPDVV Y  L  G     +
Sbjct: 391 MINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGK 450

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ + KL   M   G+  D   Y   ++G CKNG + +A+ L+R +     + +   YN 
Sbjct: 451 MDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNI 510

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++ GL  +GR+  A E +  +    +   + TYNI++  LC +  +D+A  +F  + +K
Sbjct: 511 ILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSK 569



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 176/352 (50%), Gaps = 29/352 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           +A   F+++R  G  PNV TY T+I+ LC+ G    A++ F +M +              
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372

Query: 50  ------GEFGVVCK-----------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                 GE+  V K           PN +   TI+D LCKEG V +A + F ++    + 
Sbjct: 373 HGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+VV+Y  LI G+C     +E+  L   M+  G++P+ V+++ ++N  CKNG++D+A  L
Sbjct: 433 PDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALAL 492

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M    V+PNA  YN ++ G    GRV  A E ++ +   G +  + +Y+I++ G C+
Sbjct: 493 YREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCE 552

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N  ++ AL ++  + SK  + +V  +N + +GL ++ ++  A  LF  +   G+  D   
Sbjct: 553 NSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAII 612

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           Y   I    + G + E+ ELF ++       + R  N ++  L + G ++ A
Sbjct: 613 YGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRA 664



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 131/259 (50%), Gaps = 16/259 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   F ++   G +P+V +Y  LI+G C  G    ++ L   M +      +  +P+ 
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVS------IGLRPDN 470

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +++G CK G VD A  L+ +M  +++ PN +TYN ++HG  +A     A+  +++
Sbjct: 471 VTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMK 530

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF-----VYNTLMDGF 175
           ++D G+Q  + ++N+++  LC+N  +DEA R+ +     G+R   F      +N ++ G 
Sbjct: 531 IVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQ-----GLRSKEFQLEVRTFNIMIVGL 585

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
              GR+  A+ LF ++   G   +   Y ++I  + +   +E +  L+  M   G   + 
Sbjct: 586 LKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANS 645

Query: 236 VIYNTLFIGLFEIHQVERA 254
              N +   L E   V RA
Sbjct: 646 RTLNAIVRKLLEKGDVRRA 664


>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 525

 Score =  260 bits (665), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 141/366 (38%), Positives = 207/366 (56%), Gaps = 6/366 (1%)

Query: 3   AAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           AAA F   L   G E N +T+ T+INGLC+ G T  A++  E++   N  F ++     +
Sbjct: 95  AAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLL-----I 149

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+TI+D LCK+G +  A   F  M  + I P++V YNSLIHG C    WNEA  L   M
Sbjct: 150 AYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNM 209

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV +FNV+++  CK GK+  A  ++  M+ +GV P+   YN+++ G CL  ++
Sbjct: 210 MRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQM 269

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ++F  M   G   NV +YS LI+G+CK + I  A+ +  EM++ G+  DVV ++TL
Sbjct: 270 NDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTL 329

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  + E A +LF  M  H    +       +DGL K  +  EA+ LFR +  +  
Sbjct: 330 IGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNL 389

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           EL+I  YN ++DG+C  G+   A ELF  LP   +  DVV Y  MI  LC +G +D A D
Sbjct: 390 ELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAED 449

Query: 362 LFLDME 367
           L + ME
Sbjct: 450 LLMKME 455



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 139/270 (51%), Gaps = 6/270 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+V TYN++I+G C       A+ +FE M +     G++  PN VTY+++I G CK 
Sbjct: 248 GVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHK----GLL--PNVVTYSSLIHGWCKT 301

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             ++KA  +  +M +  +N +VVT+++LI GFC A     A  LF  M +    PN+ + 
Sbjct: 302 RNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTC 361

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            +I++ L K     EA  L   M ++ +  N   YN ++DG C  G+ N A ELF  + S
Sbjct: 362 AIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPS 421

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + +V +Y+ +I G CK   ++ A  L  +M   G  P+   YN L  GL + + + R
Sbjct: 422 KGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISR 481

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           + K    M+  G++AD       I     N
Sbjct: 482 STKYLMLMKGKGLSADATTTELLISYFSAN 511



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 144/279 (51%), Gaps = 6/279 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G  PNV T+N L++  C+ G    A  +   M +      V  +P+ V
Sbjct: 201 EATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVH------VGVEPDVV 254

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I G C    ++ A ++F  M  + + PNVVTY+SLIHG+C   + N+A  +  EM
Sbjct: 255 TYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEM 314

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+  +VV+++ ++   CK G+ + A  L   M +    PN      ++DG       
Sbjct: 315 VNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFH 374

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  ME M  + N+ +Y+I+++G C   +   A  L+S + SKGI+ DVV Y T+
Sbjct: 375 SEAISLFRKMEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTM 434

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             GL +   ++ A  L  +M+ +G   + + Y   + GL
Sbjct: 435 IKGLCKEGLLDDAEDLLMKMEENGCPPNEFTYNVLVRGL 473



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 139/303 (45%), Gaps = 1/303 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P    + T+   + K      A  L        + P+V T   +I+  C+         +
Sbjct: 5   PPDKDFATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSV 64

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   GV+P VV+F  ++N LC  G +  A+R  + +  +G   N++ + T+++G C 
Sbjct: 65  LGAMFKIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCK 124

Query: 178 TGRVNRAEELFVSMESMGCKHNVF-SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            G    A      +E      ++  +YS +++  CK+  +  AL+ +S M  KGI+PD+V
Sbjct: 125 VGDTAGAISYLEKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLV 184

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN+L  GL    +   A  L   M R G+  +   +   +D  CK G I  A  +   +
Sbjct: 185 AYNSLIHGLCSFGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFM 244

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
             +  E D+  YN +I G C   ++  A ++F  +    L+ +VVTY+ +IH  C    +
Sbjct: 245 VHVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNI 304

Query: 357 DKA 359
           +KA
Sbjct: 305 NKA 307



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 29/231 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK------- 57
           G  PNV TY++LI+G C+T +   A+ + +EM N      VV         CK       
Sbjct: 283 GLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAA 342

Query: 58  -------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                        PN  T   I+DGL K  F  +A  LF KM+  N+  N+VTYN ++ G
Sbjct: 343 IELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDG 402

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C    +N+A+ LF  +  +G+Q +VV++  ++  LCK G +D+A  LL  M + G  PN
Sbjct: 403 MCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPN 462

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
            F YN L+ G      ++R+ +  + M+  G   +  +  +LI+ +  NKE
Sbjct: 463 EFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLISYFSANKE 513



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 1/178 (0%)

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G K +V + +I+IN  C  K      S+   M   G++P VV + TL  GL     V 
Sbjct: 35  SLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEPTVVTFATLINGLCAEGNVG 94

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR-AYNCL 311
            A +  D ++  G  ++++ + T I+GLCK G    A+     +       D+  AY+ +
Sbjct: 95  AAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLIAYSTI 154

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +D LCK G L +A   F  +    +  D+V YN +IH LC+ G+ ++A  L  +M  K
Sbjct: 155 MDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGNMMRK 212



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 5/170 (2%)

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++ L     K K    A+SL     S G+KPDV     +   L  +      F +   M 
Sbjct: 10  FATLFGVIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMF 69

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           + GV      + T I+GLC  G +  A     +L  + YE +   +  +I+GLCK G   
Sbjct: 70  KIGVEPTVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTA 129

Query: 323 IAWELFRSLP---RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A      +    RG  +  ++ Y+ ++ +LC DG +  A + F  M  K
Sbjct: 130 GAISYLEKIEGRNRGFDL--LIAYSTIMDSLCKDGMLCLALNFFSGMTCK 177


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  260 bits (664), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 141/354 (39%), Positives = 209/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +N LI    + G    A  +F EM     E GV  +P+ VTY+T+I  LC+ 
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMR----EQGV--EPDVVTYSTVIAALCRI 439

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F +M D+ + P++ TY+ LI GFC   D  +AK L ++MM++G++P++  F
Sbjct: 440 GKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCF 499

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I+N LCK G++ +A  + +  I IG+ PN  VYNTLMDG+CL G++  A  +F  M S
Sbjct: 500 NFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVS 559

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV  Y  L+NGYCK   I+  LSL+ E+L KGIKP   +YN +  GLF+  +   
Sbjct: 560 AGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVP 619

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   F EM   G+A D + Y   + GL KN    EA+ LF+ L  +  ++DI   N +I 
Sbjct: 620 AKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIA 679

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+ +  R++ A +LF S+ R  L+  VVTY+IM+  L  +G +++A D+F  ME
Sbjct: 680 GMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 190/358 (53%), Gaps = 4/358 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+VF+Y  ++  LC    +  A  L   MA G    G VC PN V Y T
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEG----GAVCLPNAVAYNT 221

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG  KEG V+KA +LF +M    I+P++ TYN +++  C A   ++A+ +  +M+D+G
Sbjct: 222 VIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKG 281

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P+  ++N ++      G+  EA R+ + M   G+ P+    N+LM   C  G++  A 
Sbjct: 282 VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDAR 341

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F SM   G K ++FSY I++NGY     +     L++ MLS GI PD  I+N L    
Sbjct: 342 DVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAY 401

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++RA  +F+EM+  GV  D   Y T I  LC+ G + +AVE F  +        I
Sbjct: 402 AKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSI 461

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y+ LI G C  G L  A +L   +    +  D+  +N +I+ LC  G++  A+++F
Sbjct: 462 STYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIF 519



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G  P+V T N+L+  LC+ G    A ++F+ MA   G+     K +  
Sbjct: 304 EAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM-KGQ-----KTDIF 357

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +++G   +G +    ELF  M  + I P+   +N LI  +      + A  +F EM
Sbjct: 358 SYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEM 417

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QGV+P+VV+++ ++  LC+ GKMD+A      MI  GV P+   Y+ L+ GFC  G +
Sbjct: 418 REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDL 477

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A++L + M + G + ++  ++ +IN  CK   +  A +++   +S G+ P+V++YNTL
Sbjct: 478 LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTL 537

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E A ++FD M   G+  +   Y T ++G CK G I E + LFR +     
Sbjct: 538 MDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGI 597

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     YN ++ GL ++GR   A   F  +    +  D  TY+I++  L  +   D+A  
Sbjct: 598 KPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAIL 657

Query: 362 LFLDMEA 368
           LF ++ A
Sbjct: 658 LFKELHA 664



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 176/367 (47%), Gaps = 7/367 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A F ++   G   +    + L+ GLC    T  AL++        G     C P+  +Y 
Sbjct: 129 AFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLG-----CVPDVFSYC 183

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            ++  LC +    +A EL   M +      PN V YN++I GF    D N+A  LF EM+
Sbjct: 184 IVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMV 243

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P++ ++N ++N LCK   MD+A  +L  M+  GV P+ + YN+L+ G+  TG+  
Sbjct: 244 QRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWK 303

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   M S G   +V + + L+   CK+ +I+ A  ++  M  KG K D+  Y  + 
Sbjct: 304 EAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIML 363

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G      +    +LF+ M   G+A D+  +   I    K G +  A  +F  +R    E
Sbjct: 364 NGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVE 423

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y+ +I  LC+ G++  A E F  +    +   + TY+ +I   C  G + KA+DL
Sbjct: 424 PDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDL 483

Query: 363 FLDMEAK 369
            L M  K
Sbjct: 484 VLQMMNK 490



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 168/343 (48%), Gaps = 6/343 (1%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           CR G  + A+ LF  ++  +G    V  P   TY  ++D   +          F ++   
Sbjct: 81  CRDGPAL-AVALFNRVSRAHGP--RVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKT 137

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDE 148
            +  + +  ++L+ G C A    EA  + +  M   G  P+V S+ +++  LC + K  +
Sbjct: 138 GLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQ 197

Query: 149 ASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    PNA  YNT++DGF   G VN+A +LF  M   G   ++ +Y+ +
Sbjct: 198 ADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCV 257

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +N  CK + ++ A ++  +M+ KG+ PD   YN+L  G     Q + A ++  +M   G+
Sbjct: 258 VNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGI 317

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D     + +  LCK+G I +A ++F ++ +   + DI +Y  +++G    G L    E
Sbjct: 318 LPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTE 377

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF  +    +  D   +N++I A    G +D+A  +F +M  +
Sbjct: 378 LFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQ 420



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 156/333 (46%), Gaps = 10/333 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L +++   G  P++  +N +IN LC+ G  + A N+F+          +   PN 
Sbjct: 478 LKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDF------TISIGLHPNV 531

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y T++DG C  G ++ A  +F  M    I PNVV Y +L++G+C     +E   LF E
Sbjct: 532 MVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFRE 591

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +G++P+   +N+I++ L + G+   A      M + G+  + + Y+ ++ G      
Sbjct: 592 ILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSC 651

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A  LF  + +M  K ++ + +I+I G  + + +E A  L++ +   G+ P VV Y+ 
Sbjct: 652 SDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSI 711

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +   L +   VE A  +F  M+  G    ++      +  L +   IV A      +   
Sbjct: 712 MMTNLIKEGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDER 771

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            + LD      LID     G  +   E  R LP
Sbjct: 772 SFSLDHSTTTLLIDLFSSKGTCR---EHIRFLP 801


>gi|449458524|ref|XP_004146997.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Cucumis sativus]
          Length = 481

 Score =  260 bits (664), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 141/357 (39%), Positives = 212/357 (59%), Gaps = 12/357 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P + ++N L+ GL +  H     +L+ +M            P+  T   + + LC    V
Sbjct: 88  PPISSFNRLLGGLAKINHYSQLFSLYNKMRLAG------LSPDLFTLNILANCLCNLNRV 141

Query: 77  DKAKELFLKMKDENINPNVVTYNSLI---HGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            +       +      P++VTYN+LI   +G C     +EAK +F EM  QG+ PNV+S+
Sbjct: 142 SEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISY 201

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV---NRAEELFVS 190
           + +++  C  GK++E+ RL   M+  GV+PN   +N L+D  C  G++   + A +LF+S
Sbjct: 202 SSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLS 261

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M S GC+HN  SY+ILINGYCK  ++E A++LY+EM   G +P+V  Y+TL  GL +  +
Sbjct: 262 MPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGK 321

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V  A KLF  M+  G++ D+  Y  F+DGLCKNG + EA+ELF  L+   ++LD  +Y+ 
Sbjct: 322 VGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSR 381

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LIDGLCK+G+++IAWE F+ L +  L  +VVT NIMIH  C   ++DKA  LF  ME
Sbjct: 382 LIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKME 438



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 180/371 (48%), Gaps = 85/371 (22%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L+ K+R+ G  P++FT N L N LC          + E +A   G       P+ VTY 
Sbjct: 111 SLYNKMRLAGLSPDLFTLNILANCLCNLNR------VSEGLAAMTGILRRGYIPDIVTYN 164

Query: 65  TIIDGL---CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+I GL   CK G  D+AKE+F +MK + + PNV++Y+SL+HGFC A    E+K LF EM
Sbjct: 165 TLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEM 224

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKM----------------------------------- 146
           +DQGVQPN+V FNV+++ LCK GK+                                   
Sbjct: 225 VDQGVQPNLVQFNVLIDILCKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKI 284

Query: 147 ---DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-------- 195
              +EA  L   M Q+G RPN   Y+TL+ G   TG+V  A +LF  M++ G        
Sbjct: 285 WKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIY 344

Query: 196 -------CKHNVF--------------------SYSILINGYCKNKEIEGALSLYSEMLS 228
                  CK+ V                     SYS LI+G CK  ++E A   + ++  
Sbjct: 345 VIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQ 404

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR---HGVAADTWAYRTFIDGLCKNGY 285
           +G++P+VV  N +  G   + QV++A  LF++M++   +G   D   Y T + G C++  
Sbjct: 405 EGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNK 464

Query: 286 IVEAVELFRTL 296
           + E V L   +
Sbjct: 465 LEEVVNLLHKM 475



 Score =  138 bits (347), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 162/306 (52%), Gaps = 8/306 (2%)

Query: 71  CKEGFVD--KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           CK G +D  +A   F  M   +  P + ++N L+ G    N +++   L+ +M   G+ P
Sbjct: 64  CKTGNIDVIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSP 123

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF---CLTGRVNRAE 185
           ++ + N++ N LC   ++ E    +  +++ G  P+   YNTL+ G    C  G  + A+
Sbjct: 124 DLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAK 183

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F  M++ G   NV SYS L++G+C   ++E +  L++EM+ +G++P++V +N L   L
Sbjct: 184 EIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDIL 243

Query: 246 FE---IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            +   I  +  A KLF  M   G   +  +Y   I+G CK   + EA+ L+  +  +   
Sbjct: 244 CKEGKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKR 303

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +++ Y+ L+ GL ++G++  A +LF  +    +  D   Y I +  LC +G + +A +L
Sbjct: 304 PNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMEL 363

Query: 363 FLDMEA 368
           F ++++
Sbjct: 364 FNELKS 369



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 121/231 (52%), Gaps = 9/231 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF+ +   GCE N  +Y  LING C+      A+NL+ EM        V  +PN  
Sbjct: 254 SARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQ------VGKRPNVK 307

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T++ GL + G V  A +LF  MK   I+ +   Y   + G C      EA  LF E+
Sbjct: 308 TYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNEL 367

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                + +  S++ +++ LCK GK++ A    + + Q G++PN    N ++ GFC   +V
Sbjct: 368 KSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQV 427

Query: 182 NRAEELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           ++A  LF  ME M   GC  ++ +Y+ L+ G+C++ ++E  ++L  +M  +
Sbjct: 428 DKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 478



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 3/192 (1%)

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           T   N    + ++    G        S L N    N ++  A   +  M+     P +  
Sbjct: 33  TSSTNHPNPILLAFNDRGISFQHRLSSFLRNCKTGNIDVIQAFHFFDLMMRSHPIPPISS 92

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N L  GL +I+   + F L+++M+  G++ D +      + LC    + E +     + 
Sbjct: 93  FNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGIL 152

Query: 298 ILKYELDIRAYNCLID---GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
              Y  DI  YN LI    GLCK G    A E+F  +    +I +V++Y+ ++H  C  G
Sbjct: 153 RRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAG 212

Query: 355 KMDKARDLFLDM 366
           K+++++ LF +M
Sbjct: 213 KLEESKRLFNEM 224



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V +AF  FD M R        ++   + GL K  +  +   L+  +R+     D+   N 
Sbjct: 71  VIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNKMRLAGLSPDLFTLNI 130

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI---HALCADGKMDKARDLFLDME 367
           L + LC   R+         + R   I D+VTYN +I   + LC  G  D+A+++F +M+
Sbjct: 131 LANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLYGLCKVGHEDEAKEIFEEMK 190

Query: 368 AK 369
           A+
Sbjct: 191 AQ 192


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/355 (39%), Positives = 209/355 (58%), Gaps = 6/355 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G   N  TY  LINGLC+ G T  AL +  ++       G +   N V Y+TIIDGLCK
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIE------GKLVNTNVVMYSTIIDGLCK 205

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +  V  A  L+ +M  + I P VVT++SLI+GFC    + +A  LF EM+ + + P+  +
Sbjct: 206 DKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYT 265

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN++++ LCK GK+ EA  ++ +M++ GV P    YNTLMDG+CL   V +A+ +   + 
Sbjct: 266 FNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIIS 325

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            M    N  SY+I+ING+CK K ++ AL L+ EM  +GI P  V YN+L  GL +  ++ 
Sbjct: 326 RMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIP 385

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A++L DEM  + + AD   Y + ID  CKN ++ +A+ L + ++    + ++  YN LI
Sbjct: 386 YAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILI 445

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           DGLCK G+LK A ++F+ L       +  TYNIMI+ LC +G  D+A  L   ME
Sbjct: 446 DGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKME 500



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 189/377 (50%), Gaps = 15/377 (3%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA------NGNGEFGVVCKP 58
           +L  ++   G +P++FT + LIN  C  G    A ++F ++       NG     ++   
Sbjct: 88  SLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHD 147

Query: 59  ---------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
                    N VTY  +I+GLCK G    A ++  +++ + +N NVV Y+++I G C   
Sbjct: 148 HVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDK 207

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
              +A  L+ EM+ + + P VV+F+ ++   C  GK  +A RL   M+   + P+A+ +N
Sbjct: 208 LVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFN 267

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L+D  C  G++  A+ +   M   G +  V +Y+ L++GYC   E+  A  + S +   
Sbjct: 268 ILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM 327

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            + P+   YN +  G  +I  V+ A  LF EM   G+A     Y + IDGLCK G I  A
Sbjct: 328 RVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYA 387

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            EL   +       DI  YN LID  CK+  +  A  L + +    +  ++ TYNI+I  
Sbjct: 388 WELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDG 447

Query: 350 LCADGKMDKARDLFLDM 366
           LC  G++  A+D+F D+
Sbjct: 448 LCKGGQLKNAQDVFQDL 464



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 143/274 (52%), Gaps = 14/274 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK----PNTVTYTTIIDG 69
           G EP V TYNTL++G C          L  E+        ++ +    PN+ +Y  +I+G
Sbjct: 293 GVEPTVVTYNTLMDGYC----------LVNEVGKAKHVLSIISRMRVAPNSRSYNIMING 342

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            CK   VD+A  LF +M    I P+ VTYNSLI G C A     A  L  EM +  +  +
Sbjct: 343 FCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPAD 402

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           +V++N +++  CKN  +D+A  L++ + + G++PN   YN L+DG C  G++  A+++F 
Sbjct: 403 IVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQ 462

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +   G   N ++Y+I+ING CK    + A  L S+M   GI PD V Y T+   LF   
Sbjct: 463 DLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKD 522

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           + E+A KL  EM   GV    +  R  + G   N
Sbjct: 523 ENEKAQKLLREMVIKGVVVYAFEIRRTLVGRTLN 556



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/316 (28%), Positives = 151/316 (47%), Gaps = 23/316 (7%)

Query: 74  GFV-DKAKELFLKMKDENINPNVVTYNS-LIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           GFV D A   F +M+     P++V +N  L +     N +     L  +M  +GV+P++ 
Sbjct: 44  GFVVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLF 103

Query: 132 SFNVIMN---------------------ELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
           + ++++N                      LC NGK++EA    + ++ +G   N   Y  
Sbjct: 104 TLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGI 163

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L++G C  G+   A ++   +E      NV  YS +I+G CK+K +  A  LYSEM+ K 
Sbjct: 164 LINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKR 223

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I P VV +++L  G   + + + AF+LF+EM    +  D + +   +D LCK G I EA 
Sbjct: 224 IPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAK 283

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +   +     E  +  YN L+DG C    +  A  +   + R  +  +  +YNIMI+  
Sbjct: 284 NVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGF 343

Query: 351 CADGKMDKARDLFLDM 366
           C    +D+A  LF +M
Sbjct: 344 CKIKMVDEALCLFHEM 359



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 103/220 (46%), Gaps = 29/220 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEF 52
           EA  LF ++   G  P+  TYN+LI+GLC+ G    A  L +EM N          N   
Sbjct: 351 EALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLI 410

Query: 53  GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            V CK                    PN  TY  +IDGLCK G +  A+++F  +  +  N
Sbjct: 411 DVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYN 470

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            N  TYN +I+G C    ++EA+ L  +M D G+ P+ V++  I+  L    + ++A +L
Sbjct: 471 VNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKL 530

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           L  M+  GV   AF     + G  L   +N    LF ++E
Sbjct: 531 LREMVIKGVVVYAFEIRRTLVGRTLNLGMNLISLLFSALE 570


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  259 bits (662), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 133/330 (40%), Positives = 194/330 (58%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K    G +P+V TY TL+NGLC+ G+T  A+ L   M   N      C+PN +
Sbjct: 200 EALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKN------CRPNVI 253

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIID LCK+  V +A  LF +M  + I+P++ TYNSLIH  C   +W     L  EM
Sbjct: 254 AYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEM 313

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + PNVV F+ +++ LCK G +  A  ++++MI+ GV P+   Y  LMDG CL   +
Sbjct: 314 VNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEM 373

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F +M   GC  NV SY+ILINGYC+ + ++ A+ L  +M  +G+  D V YNTL
Sbjct: 374 DEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 433

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM   G   D   YR  +D LCKN ++ EA+ L + +     
Sbjct: 434 IHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNL 493

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           + DI  YN  IDG+C++G L+ A +LF +L
Sbjct: 494 DADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 201/367 (54%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  KL   GC+P+  T+NTLI GLC  G    AL+LF++        G   +P+ VT
Sbjct: 166 AFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDK------TIGEGFQPDVVT 219

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+++GLCK G    A  L   M  +N  PNV+ YN++I   C      EA  LF EM+
Sbjct: 220 YGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMI 279

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P++ ++N +++ LC   +    + LL  M+   + PN  V++T++D  C  G + 
Sbjct: 280 TKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIA 339

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++   M   G + +V +Y+ L++G+C   E++ A+ ++  M+ KG  P+V  YN L 
Sbjct: 340 IAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI 399

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +I ++++A  L ++M   G+ ADT  Y T I GLC  G +  A+ LF  +      
Sbjct: 400 NGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQI 459

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y  L+D LCK+  L  A  L +++    L AD++ YNI I  +C  G+++ ARDL
Sbjct: 460 PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDL 519

Query: 363 FLDMEAK 369
           F ++  +
Sbjct: 520 FSNLSCQ 526



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 184/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++      P+   +  L+  + +  H    L+L  +M      FG+   P+  
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQM----DSFGI--PPDVY 148

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C    +  A  +  K+      P+  T+N+LI G C      EA  LF + 
Sbjct: 149 TLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKT 208

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+VV++  +MN LCK G    A RLL  M+Q   RPN   YNT++D  C   +V
Sbjct: 209 IGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQV 268

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M + G   ++F+Y+ LI+  C   E +   +L +EM++  I P+VV+++T+
Sbjct: 269 TEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTV 328

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   +  A  + D M + GV  D   Y   +DG C    + EAV++F T+     
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGC 388

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++R+YN LI+G C+  R+  A  L   +    LIAD VTYN +IH LC  G++  A  
Sbjct: 389 VPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIA 448

Query: 362 LFLDMEAK 369
           LF +M A 
Sbjct: 449 LFHEMVAS 456



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 141/267 (52%), Gaps = 6/267 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P++FTYN+LI+ LC          L  EM N          PN V
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSK------IMPNVV 323

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++T++D LCKEG +  A ++   M    + P+VVTY +L+ G C  ++ +EA  +F  M
Sbjct: 324 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 383

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNV S+N+++N  C+  +MD+A  LLE M   G+  +   YNTL+ G C  GR+
Sbjct: 384 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRL 443

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M + G   ++ +Y IL++  CKN  +  A+ L   +    +  D+++YN  
Sbjct: 444 QHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIA 503

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA 268
             G+    ++E A  LF  +   G AA
Sbjct: 504 IDGMCRAGELEAARDLFSNLSCQGFAA 530



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 143/294 (48%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M   +  P+ V +  L+        ++    L  +M   G+ P+V + N+
Sbjct: 93  LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  ++++G +P+   +NTL+ G C+ G++  A  LF      G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +V +Y  L+NG CK      A+ L   M+ K  +P+V+ YNT+   L +  QV  AF
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++ D + Y + I  LC          L   +   K   ++  ++ ++D L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G + IA ++   + +  +  DVVTY  ++   C   +MD+A  +F  M  K
Sbjct: 333 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHK 386



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 126/264 (47%), Gaps = 7/264 (2%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNA 165
           N  ++A   F  M+     P+ V F  ++  +    KM   S +L L  Q+   G+ P+ 
Sbjct: 91  NTLDDALSSFNRMLHMHPPPSTVDFTKLLTSI---AKMKHYSTVLSLSTQMDSFGIPPDV 147

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           +  N L++ FC   R+  A  +   +  +GC+ +  +++ LI G C   +I  AL L+ +
Sbjct: 148 YTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDK 207

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
            + +G +PDVV Y TL  GL ++     A +L   M +     +  AY T ID LCK+  
Sbjct: 208 TIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQ 267

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA  LF  +       DI  YN LI  LC     K    L   +    ++ +VV ++ 
Sbjct: 268 VTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFST 327

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           ++ ALC +G +  A D+ +DM  K
Sbjct: 328 VVDALCKEGMIAIAHDV-VDMMIK 350


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/354 (39%), Positives = 206/354 (58%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + +N ++    +      A+++F  M+    + G+   P+ VTY  +ID LCK 
Sbjct: 439 GISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMS----QHGL--SPDVVTYGILIDALCKL 492

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F +M ++ + PN V +NSL++G C  + W +A+ LF EM DQGV+PNVV F
Sbjct: 493 GRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N IM  LC  G++  A RL++ M ++GVRPN   YNTL+ G CL GR + A +L   M S
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K ++ SY  L+ GYCK   I+ A  L+ EML KG+ P  V Y+T+  GLF   +   
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M + G   D + Y   ++GLCK   + EA ++F++L       +I  +  +ID
Sbjct: 673 AKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMID 732

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR K A +LF S+P   L+ +VVTY IM+  +  +G +D+  +LFL ME
Sbjct: 733 VLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAME 786



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 198/397 (49%), Gaps = 40/397 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYT 64
           L  ++  FGC PNV + NTL+ GLC       AL L   MA +G G     C PN VTY 
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGN----CTPNVVTYN 203

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           TIIDGLCK   VD+A+ +   M D+ +  +VVTY+++I G C A   + A+ +   M+D+
Sbjct: 204 TIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDK 263

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+P+VV++N I++ LCK   +D A  +L+ MI  GV+P+   YNT++DG C    V+RA
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRA 323

Query: 185 EELFVSMESMGCKHNVFSYSILINGY---------------------------------- 210
           + +   M     K ++ +Y+ LI+GY                                  
Sbjct: 324 DGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDY 383

Query: 211 -CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CKN +   A  ++  M+ KGIKP+V IY  L  G      +     L D M  +G++ +
Sbjct: 384 LCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPN 443

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
            + +   +    K   I EA+ +F  +       D+  Y  LID LCK GR+  A   F 
Sbjct: 444 NYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFN 503

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +    +  + V +N +++ LC   + +KA +LF +M
Sbjct: 504 QMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEM 540



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 213/461 (46%), Gaps = 111/461 (24%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V TYNT+I+GLC+      A  + + M +     GV  KP+ VTY TIIDGLCK 
Sbjct: 264 GVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDK----GV--KPDVVTYNTIIDGLCKA 317

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A  +   M D+++ P++ TYN LIHG+    +W E      EM  +G+ P+VV++
Sbjct: 318 QAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTY 377

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV------------ 181
           +++++ LCKNGK  EA ++   MI+ G++PN  +Y  L+ G+   G +            
Sbjct: 378 SLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVA 437

Query: 182 -----------------------NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
                                  + A  +F  M   G   +V +Y ILI+  CK   ++ 
Sbjct: 438 NGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDD 497

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF-------------------- 258
           A+  +++M++ G+ P+ V++N+L  GL  + + E+A +LF                    
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557

Query: 259 ---------------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
                          D M+R GV  +  +Y T I G C  G   EA +L   +  +  + 
Sbjct: 558 NLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPR-GVLIA------------------------ 338
           D+ +Y+ L+ G CK+GR+  A+ LFR + R GV                           
Sbjct: 618 DLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELY 677

Query: 339 ----------DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                     D+ TYNI+++ LC    +D+A  +F  + +K
Sbjct: 678 LNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK 718



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 189/385 (49%), Gaps = 45/385 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G   N    N L+NGLC       A++ L   M     EFG  C PN V+  T++ GLC 
Sbjct: 120 GWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMP----EFG--CMPNVVSCNTLLKGLCN 173

Query: 73  EGFVDKAKELFLKMKDE---NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           E  V++A EL   M ++   N  PNVVTYN++I G C A   + A+ +   M+D+GV+ +
Sbjct: 174 EKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLD 233

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+++ I++ LCK   +D A  +L+ MI  GV+P+   YNT++DG C    V+RAE +  
Sbjct: 234 VVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQ 293

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   G K +V +Y+ +I+G CK + ++ A  +   M+ K +KPD+  YN L  G     
Sbjct: 294 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTG 353

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           + +   +  +EM   G+  D   Y   +D LCKNG   EA ++F  +     + ++  Y 
Sbjct: 354 EWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYG 413

Query: 310 CLIDG--------------------------------LC---KSGRLKIAWELFRSLPRG 334
            L+ G                                LC   K   +  A  +F  + + 
Sbjct: 414 ILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQH 473

Query: 335 VLIADVVTYNIMIHALCADGKMDKA 359
            L  DVVTY I+I ALC  G++D A
Sbjct: 474 GLSPDVVTYGILIDALCKLGRVDDA 498



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 187/370 (50%), Gaps = 12/370 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCR---TGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A  LF +L       +V  +N L+N + R   +  + +A++LF  MA          +P
Sbjct: 32  DALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSN---KVRP 88

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  TY+ +    C+ G ++     F  +       N V  N L++G C A   +EA  + 
Sbjct: 89  DLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDIL 148

Query: 119 IEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG---VRPNAFVYNTLMDG 174
           +  M + G  PNVVS N ++  LC   +++EA  LL  M + G     PN   YNT++DG
Sbjct: 149 LRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDG 208

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C    V+RAE +   M   G K +V +YS +I+G CK + ++ A  +   M+ KG+KPD
Sbjct: 209 LCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPD 268

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV YNT+  GL +   V+RA  +   M   GV  D   Y T IDGLCK   +  A  + +
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLK-IAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
            +     + DI+ YNCLI G   +G  K +   L     RG L  DVVTY++++  LC +
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARG-LDPDVVTYSLLLDYLCKN 387

Query: 354 GKMDKARDLF 363
           GK  +AR +F
Sbjct: 388 GKCTEARKIF 397



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 174/355 (49%), Gaps = 41/355 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++   G  P+V TY  LI+ LC+ G    A+  F +M N     GV   PN+V
Sbjct: 462 EAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIND----GVT--PNSV 515

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV------------------------- 96
            + +++ GLC     +KA+ELF +M D+ + PNVV                         
Sbjct: 516 VFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSM 575

Query: 97  ----------TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                     +YN+LI G C A   +EA  L   M+  G++P+++S++ ++   CK G++
Sbjct: 576 ERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRI 635

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A  L   M++ GV P A  Y+T++ G   T R + A+EL+++M   G + ++++Y+I+
Sbjct: 636 DNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNII 695

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG CK   ++ A  ++  + SK ++P+++ +  +   LF+  + + A  LF  +  HG+
Sbjct: 696 LNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGL 755

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
             +   Y   +  + + G + E   LF  +       D    N +I  L   G +
Sbjct: 756 VPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEI 810



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 135/264 (51%), Gaps = 9/264 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A  L   +   G  PNV +YNTLI G C  G T  A  L + M +      V  KP+ 
Sbjct: 566 MVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS------VGLKPDL 619

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y T++ G CK G +D A  LF +M  + + P  VTY++++ G  +   ++EAK L++ 
Sbjct: 620 ISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLN 679

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G Q ++ ++N+I+N LCK   +DEA ++ + +    +RPN   +  ++D     GR
Sbjct: 680 MIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGR 739

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF S+ S G   NV +Y I++    +   ++   +L+  M   G  PD V+ N 
Sbjct: 740 KKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNA 799

Query: 241 LFIGLFEIHQVERA---FKLFDEM 261
           +   L    ++ RA       DEM
Sbjct: 800 IIRSLLGRGEIMRAGAYLSKIDEM 823



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 29/255 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L   +   G +P++ +Y+TL+ G C+TG    A  LF EM       G V     +
Sbjct: 602 EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661

Query: 62  -----------------------------TYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                        TY  I++GLCK   VD+A ++F  +  +++ 
Sbjct: 662 QGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR 721

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN++T+  +I          +A  LF  +   G+ PNVV++ ++M  + + G +DE   L
Sbjct: 722 PNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNL 781

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M + G  P++ + N ++      G + RA      ++ M       + S+LI+ + +
Sbjct: 782 FLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLISLFSR 841

Query: 213 NKEIEGALSLYSEML 227
            +    A SL  + L
Sbjct: 842 EEYKNHAKSLPEKYL 856



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 6/120 (5%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCK---NGYIVEAVELF-RTLRIL--KYELD 304
           ++ A KLFDE+  H   A   A+   ++ + +   +     AV LF R  R    K   D
Sbjct: 30  IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+ L    C+ GR++  +  F  + +     + V  N +++ LC   ++D+A D+ L
Sbjct: 90  LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 136/343 (39%), Positives = 202/343 (58%), Gaps = 6/343 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           TY TLINGLC+ G T  A  L  +M       G V +PN V Y  I+DGLCK+G V +A+
Sbjct: 185 TYGTLINGLCKIGLTREAFELLHKME------GQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L+  +    I+P+V TY  LIHGFC    W E   L  +M+D+ V  NV ++N++++ L
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G + +A  +  LMI+ G RP+   +NTLM G+CL   V  A +LF +    G   +V
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           +SY+ILI GYCKN  I+ ALSL+++M  K + P++V Y++L  GL +  ++  A++LF  
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           +   G + +   Y   +D LCK   + +A+ELF  +       ++ +YN LI+G CKS R
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +  A  LF  + R  L+ D VTYN +I  LC  G++  A +LF
Sbjct: 479 IDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELF 521



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/365 (37%), Positives = 194/365 (53%), Gaps = 14/365 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP---- 58
           A +L  ++ + G  P++ T + LIN  C  GH   A ++           G+V K     
Sbjct: 97  AISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVL----------GMVLKRGYQL 146

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N +T TTI+ GLC  G V KA E    +  +    + VTY +LI+G C      EA  L 
Sbjct: 147 NAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELL 206

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M  Q V+PNVV +N+I++ LCK+G + EA  L   ++  G+ P+ F Y  L+ GFC  
Sbjct: 207 HKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGL 266

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+      L   M       NV++Y+ILI+  CK   +  A  + + M+ +G +PD+V +
Sbjct: 267 GQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTF 326

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  G    + V  A KLFD     G+  D W+Y   I G CKN  I EA+ LF  +  
Sbjct: 327 NTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNY 386

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            K   +I  Y+ LIDGLCKSGR+  AWELF ++  G    +V+TYNIM+ ALC    +DK
Sbjct: 387 KKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDK 446

Query: 359 ARDLF 363
           A +LF
Sbjct: 447 AIELF 451



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 174/316 (55%), Gaps = 6/316 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+  +   G +P+VFTY  LI+G C  G       L  +M + N         N  
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNL------NVY 289

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LCK+G + KA ++   M +    P++VT+N+L+ G+C  ND  EA+ LF   
Sbjct: 290 TYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTF 349

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+V S+N+++   CKN ++DEA  L   M    + PN   Y++L+DG C +GR+
Sbjct: 350 AECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRI 409

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF ++   G   NV +Y+I+++  CK + ++ A+ L++ M  +G+ P+V  YN L
Sbjct: 410 SYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNIL 469

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++ A  LF+EM R  +  D+  Y   IDGLCK+G I  A ELF  +     
Sbjct: 470 INGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGP 529

Query: 302 ELDIRAYNCLIDGLCK 317
            +D+  YN L D   K
Sbjct: 530 PVDVITYNILFDAFSK 545



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 189/356 (53%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N  T  T++ GLC  G    AL  F +     G        + VTY T+I+GLCK 
Sbjct: 143 GYQLNAITLTTIMKGLCINGEVRKALE-FHDSVVAQGFL-----LDEVTYGTLINGLCKI 196

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A EL  KM+ + + PNVV YN ++ G C      EA+ L+ +++ +G+ P+V ++
Sbjct: 197 GLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTY 256

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++  C  G+  E +RLL  M+   V  N + YN L+D  C  G + +A ++   M  
Sbjct: 257 TCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIE 316

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + ++ +++ L++GYC   ++  A  L+      GI PDV  YN L IG  + ++++ 
Sbjct: 317 RGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDE 376

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF++M    +A +   Y + IDGLCK+G I  A ELF  +       ++  YN ++D
Sbjct: 377 ALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLD 436

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LCK   +  A ELF  +    L  +V +YNI+I+  C   ++D+A +LF +M  +
Sbjct: 437 ALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRR 492



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 124/216 (57%), Gaps = 6/216 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF      G  P+V++YN LI G C+      AL+LF +M            PN 
Sbjct: 340 VEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKK------LAPNI 393

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+++IDGLCK G +  A ELF  + D   +PNV+TYN ++   C     ++A  LF  
Sbjct: 394 VTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNL 453

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ PNV S+N+++N  CK+ ++DEA  L E M +  + P++  YN L+DG C +GR
Sbjct: 454 MFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGR 513

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           ++ A ELF  M   G   +V +Y+IL + + K + +
Sbjct: 514 ISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQHV 549



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 143/294 (48%), Gaps = 2/294 (0%)

Query: 72  KEGF--VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           K GF  +D A  LF ++   +  P+VV +N ++        +  A  L  +M  +G+ P+
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           +V+ ++++N  C  G M  A  +L ++++ G + NA    T+M G C+ G V +A E   
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           S+ + G   +  +Y  LING CK      A  L  +M  + ++P+VVIYN +  GL +  
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            V  A  L+ ++   G+  D + Y   I G C  G   E   L   +      L++  YN
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            LID LCK G L  A ++   +       D+VT+N ++   C    + +AR LF
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLF 346



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/221 (28%), Positives = 99/221 (44%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A  L   +I +   P+   +N ++           A  L   M   G   ++ + SI
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN YC    +  A S+   +L +G + + +   T+  GL    +V +A +  D +   G
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   Y T I+GLCK G   EA EL   +       ++  YN ++DGLCK G +  A 
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +L+  +    +  DV TY  +IH  C  G+  +   L  DM
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDM 279



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 70/154 (45%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A++L++ +++    P VV +N +   + ++     A  L  +M   G+         
Sbjct: 59  IDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSI 118

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+  C  G++  A  +   +    Y+L+      ++ GLC +G ++ A E   S+    
Sbjct: 119 LINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQG 178

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + D VTY  +I+ LC  G   +A +L   ME +
Sbjct: 179 FLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQ 212


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 216/380 (56%), Gaps = 16/380 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +PN  TY T+++G+C+ G T+ ALNL  +M   +        PN 
Sbjct: 199 VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHII-----PNV 253

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y TIIDGL K+G    A  LF++M+++ I P++VTYN +I+GFC +  W++A+ L  E
Sbjct: 254 VIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV+F+ ++N   K GK  EA  L + M+   + P+   Y++++DGFC   R
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNR 373

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE +F    + GC  ++ +++ LI GYC+ K ++  + L  EM   G+  + + Y T
Sbjct: 374 LDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTT 433

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++  +  A  L  EM   GV  +     T +DGLC NG + +A+E+F+ ++  K
Sbjct: 434 LIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSK 493

Query: 301 YEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            ++           D++ YN LI GL   G+   A EL+  +P   ++ D +TY+ MI  
Sbjct: 494 MDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDG 553

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC   ++D+A  +F  M +K
Sbjct: 554 LCKQSRLDEATQMFDSMGSK 573



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 201/376 (53%), Gaps = 17/376 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF++++     P++ TYN +ING C +G    A  L +EM            P+ V
Sbjct: 271 DAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK------INPDVV 324

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +I+   KEG   +A+EL+ +M   +I P+ VTY+S+I GFC  N  + A+ +F   
Sbjct: 325 TFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLT 384

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P++++FN ++   C+  ++D+  +LL  M + G+  N   Y TL+ GFC  G +
Sbjct: 385 PTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDL 444

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-----------G 230
           N A++L   M S G   NV + + L++G C N +++ AL ++  M              G
Sbjct: 445 NAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNG 504

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           ++PDV  YN L  GL    +   A +L++EM   G+  DT  Y + IDGLCK   + EA 
Sbjct: 505 VEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEAT 564

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           ++F ++    +  D+  +N LI G CK+G +    ELF  + +  ++AD +TY  +I+  
Sbjct: 565 QMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGF 624

Query: 351 CADGKMDKARDLFLDM 366
                +D A D+F +M
Sbjct: 625 RKVDNIDGALDIFQEM 640



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 163/314 (51%), Gaps = 18/314 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F      GC P++ T+NTLI G CR       + L  EM     E G+V   NT+T
Sbjct: 377 AEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT----EAGLVA--NTIT 430

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM- 121
           YTT+I G C+ G ++ A++L  +M    + PNVVT N+L+ G C      +A  +F  M 
Sbjct: 431 YTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 490

Query: 122 ---MD-------QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
              MD        GV+P+V ++N+++  L   GK  EA  L E M   G+ P+   Y+++
Sbjct: 491 KSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSM 550

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C   R++ A ++F SM S     +V +++ LI GYCK   ++  L L+ EM  +GI
Sbjct: 551 IDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGI 610

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             D + Y TL  G  ++  ++ A  +F EM   GV  DT   R  + GL     +  AV 
Sbjct: 611 VADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVA 670

Query: 292 LFRTLRI-LKYELD 304
           +   L++ + Y+L+
Sbjct: 671 MLEDLQMSVGYQLE 684



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 179/386 (46%), Gaps = 46/386 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  +  L+  + R G   V ++L ++M        + C  N  ++T ++   C    +
Sbjct: 79  PSVIDFCKLMGVVVRMGRPDVVISLHKKMEM----LRMPC--NAYSFTILMKCFCSCSKL 132

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A   F K+     +P VVT+N+L+HG C  +  +EA  LF +M     +PNVV+F  +
Sbjct: 133 PFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTL 188

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-------------------- 176
           MN LC+ G++ EA  LL+ M++ G++PN   Y T++DG C                    
Sbjct: 189 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 248

Query: 177 ----------------LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                             GR + A  LF+ M+      ++ +Y+ +ING+C +     A 
Sbjct: 249 IIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAE 308

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EML + I PDVV ++ L     +  +   A +L+DEM    +   T  Y + IDG 
Sbjct: 309 QLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGF 368

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   +  A  +F          DI  +N LI G C++ R+    +L   +    L+A+ 
Sbjct: 369 CKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANT 428

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           +TY  +IH  C  G ++ A+DL  +M
Sbjct: 429 ITYTTLIHGFCQVGDLNAAQDLLQEM 454



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 128/267 (47%), Gaps = 5/267 (1%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF      ++A  LF  M+     P+V+ F  +M  + + G+ D    L + M  + 
Sbjct: 52  LQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLR 111

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +  NA+ +  LM  FC   ++  A   F  +  +G    V +++ L++G C    I  AL
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L+ +M     KP+VV + TL  GL    +V  A  L D M   G+  +   Y T +DG+
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227

Query: 281 CKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G  V A+ L R +  + + + ++  YN +IDGL K GR   A  LF  +    +  D
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           +VTYN MI+  C  G+   A  L  +M
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEM 314



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 110/225 (48%), Gaps = 5/225 (2%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A  L   M++    P+   +  LM      GR +    L   ME +    N +S++I
Sbjct: 62  LDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTI 121

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+  +C   ++  ALS + ++   G  P VV +NTL  GL    ++  A  LF +M +  
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPN 181

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V      + T ++GLC+ G +VEAV L   +     + +   Y  ++DG+CK G    A 
Sbjct: 182 VV----TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 326 ELFRSLPR-GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L R +     +I +VV YN +I  L  DG+   A +LF++M+ K
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEK 282


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 134/347 (38%), Positives = 207/347 (59%), Gaps = 5/347 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           +Y TLINGLC++G T  AL L  ++     E  ++ +P+ + YT IID  CK+  V  A 
Sbjct: 160 SYGTLINGLCKSGETRAALQLLRKI-----EGLLLVRPDVIMYTAIIDSFCKDKLVIDAY 214

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L+ +M  + I PNVVT+NSLI+GFC      EA  L  EM    V PNV +FN++++ L
Sbjct: 215 DLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGL 274

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G++ +A+ +L +MI+ GV PN   Y +LMDG+ L   VN+A+ +F ++   G   NV
Sbjct: 275 CKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNV 334

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            SYS++ING CKNK ++ A+ L+ EM  K + P+ V Y++L  GL +  ++   + L DE
Sbjct: 335 HSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDE 394

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           +   G  A+   Y + ++GLCKN  + +A+ L   ++    + D+  Y  L+DGLCK+GR
Sbjct: 395 INNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGR 454

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LK A  +++ L       ++  Y +MI+ LC +G  D+A  L   ME
Sbjct: 455 LKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQME 501



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 194/369 (52%), Gaps = 41/369 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L+ ++ V    PNV T+N+LI G C  G    A+ L  EM+  N        PN 
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN------VNPNV 264

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  +IDGLCKEG V KA  +   M  + + PNVVTY SL+ G+    + N+AK +F  
Sbjct: 265 YTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNT 324

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +GV PNV S++V++N LCKN  +DEA +L + M    + PN   Y++L+DG C +GR
Sbjct: 325 ISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGR 384

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++   +L   + + G   N+ +Y+ L+NG CKN +++ A++L ++M  +GI+PD+  Y T
Sbjct: 385 ISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTT 444

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L                                   +DGLCKNG + +A  +++ L    
Sbjct: 445 L-----------------------------------VDGLCKNGRLKDAQRIYQDLLCKG 469

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y L+IR Y  +I+GLCK G    A  L   +     + D VTY  +I AL  + K  KA 
Sbjct: 470 YPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAV 529

Query: 361 DLFLDMEAK 369
            L  +M A+
Sbjct: 530 KLLREMIAR 538



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 192/368 (52%), Gaps = 7/368 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G +P+  T NTL+ GLC  G    ALN  + +             + V+
Sbjct: 107 AFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHL------DQVS 160

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           Y T+I+GLCK G    A +L  K++    + P+V+ Y ++I  FC      +A  L+ EM
Sbjct: 161 YGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEM 220

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PNVV+FN ++   C  G++ EA  LL  M    V PN + +N L+DG C  G V
Sbjct: 221 IVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEV 280

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +   M   G + NV +Y+ L++GY   KE+  A  +++ +  +G+ P+V  Y+ +
Sbjct: 281 KKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVM 340

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   V+ A KLF EM    +  +T  Y + IDGLCK+G I +  +L   +     
Sbjct: 341 INGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQ 400

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  YN L++GLCK+ ++  A  L   +    +  D+ TY  ++  LC +G++  A+ 
Sbjct: 401 PANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQR 460

Query: 362 LFLDMEAK 369
           ++ D+  K
Sbjct: 461 IYQDLLCK 468



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/313 (28%), Positives = 159/313 (50%), Gaps = 1/313 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P    +  I+  L K      A     +M+ + I P + T+N LI+ F +    N A  +
Sbjct: 51  PPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSM 110

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+ V+ N ++  LC NGK+ EA    + +I+     +   Y TL++G C 
Sbjct: 111 VAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCK 170

Query: 178 TGRVNRAEELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           +G    A +L   +E  +  + +V  Y+ +I+ +CK+K +  A  LYSEM+ K I P+VV
Sbjct: 171 SGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVV 230

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N+L  G   + Q++ A  L +EM  + V  + + +   IDGLCK G + +A  +   +
Sbjct: 231 TFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVM 290

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E ++  Y  L+DG      +  A  +F ++    +  +V +Y++MI+ LC +  +
Sbjct: 291 IKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMV 350

Query: 357 DKARDLFLDMEAK 369
           D+A  LF +M  K
Sbjct: 351 DEAVKLFKEMHLK 363


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  258 bits (659), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/405 (33%), Positives = 216/405 (53%), Gaps = 46/405 (11%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++   GC P+VF+YN L+ GLC    +  AL L   MA+  G       P+ V+Y T
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYNT 206

Query: 66  IIDGLCKEGF--------VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           +++G  KEG         +DKA E+   M    + P+ +TYNS++HG+C +    EA   
Sbjct: 207 VLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGT 266

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA---------------------------- 149
             +M   GV+PNVV+++ +MN LCKNG+  EA                            
Sbjct: 267 LKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCK 326

Query: 150 -------SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
                   +L +LM++IGV+P+   YNTL+DG CL G+++ A +L  SM S+G K ++ +
Sbjct: 327 EGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVT 386

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y  LINGYC+   ++ AL+L+ EM+S G+ P+++ YN +  GLF   +   A +L+  + 
Sbjct: 387 YGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSIT 446

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           + G   +   Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I  L K GR+ 
Sbjct: 447 KSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMD 506

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A +LF +     L+ DV TY++M   L   G +++  DLFL ME
Sbjct: 507 EAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSME 551



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 170/323 (52%), Gaps = 6/323 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EPNV TY++L+N LC+ G +  A  +F+ M     E      P+  
Sbjct: 262 EAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLE------PDIA 315

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G CKEG V ++++LF  M    + P+++TYN+LI G C A   +EA  L   M
Sbjct: 316 TYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 375

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+P++V++  ++N  C+  +MD+A  L + M+  GV PN   YN ++ G   T R 
Sbjct: 376 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 435

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+EL+VS+   G +  + +Y+I+++G CKN   + AL ++  +    ++ +   +N +
Sbjct: 436 AAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIM 495

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +++ A  LF     +G+  D   Y    + L + G + E  +LF ++     
Sbjct: 496 IGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGC 555

Query: 302 ELDIRAYNCLIDGLCKSGRLKIA 324
             D R  N ++  L + G +  A
Sbjct: 556 SADSRMLNSIVRKLLQRGDITRA 578



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 185/378 (48%), Gaps = 18/378 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNT 60
           +A  +F +L   G   +++  N  +  + R      A++ +  MA  G G+      P  
Sbjct: 38  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKV----TPTV 92

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I   C+ G +D        +  +    + +T+  L+ G C     ++A  + + 
Sbjct: 93  HTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLR 152

Query: 121 MMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFC 176
            M + G  P+V S+N ++  LC   +  EA  LL +M      G  P+   YNT+++GF 
Sbjct: 153 RMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFF 212

Query: 177 LTG--------RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             G         +++A E+  +M   G   +  +Y+ +++GYC + + + A+    +M S
Sbjct: 213 KEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRS 272

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G++P+VV Y++L   L +  +   A K+FD M + G+  D   YRT + G CK G ++E
Sbjct: 273 DGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIE 332

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           + +LF  +  +  + DI  YN LIDG C +G++  A +L  S+    +  D+VTY  +I+
Sbjct: 333 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 392

Query: 349 ALCADGKMDKARDLFLDM 366
             C   +MD A  LF +M
Sbjct: 393 GYCRVSRMDDALALFKEM 410



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TYNTLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 331 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS------VGVKPDI 384

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G C+   +D A  LF +M    ++PN++TYN ++ G  +      AK L++ 
Sbjct: 385 VTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVS 444

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 445 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGR 504

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A++LF +  + G   +V +YS++     +   +E    L+  M   G   D  + N+
Sbjct: 505 MDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNS 564

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 565 IVRKLLQRGDITRA 578



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 29/181 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV------- 54
           +A ALF ++   G  PN+ TYN ++ GL  T  T  A  L+  +     +  +       
Sbjct: 402 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 461

Query: 55  --VCKPN--------------------TVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
             +CK N                    T T+  +I  L K G +D+AK+LF       + 
Sbjct: 462 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+V TY+ +           E   LF+ M + G   +    N I+ +L + G +  A   
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 581

Query: 153 L 153
           L
Sbjct: 582 L 582



 Score = 43.1 bits (100), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL--KYELDIRAYN 309
           E A  +FDE+ R G  A  +     +  + ++          R  R    K    +  Y 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
            LI   C++GRL + +    ++ +     D +T+  ++  LCAD +   A D+ L
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVL 151


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  258 bits (658), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 131/366 (35%), Positives = 213/366 (58%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A+    K+   G EP++ T+ +L++G C       AL LF+++       G+  +PN V
Sbjct: 135 RASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV------GMGFRPNVV 188

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I  LCK   ++ A E+F +M D  I PNVVTYNSL+ G C    W++A  L  +M
Sbjct: 189 TYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDM 248

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+QPNV++F  +++   K GK+ EA  L ++MIQ+ V P+ F Y  L++G C  GR+
Sbjct: 249 MKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRL 308

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  MES G   N  +Y+ LI+G+CK+K +E    ++ EM  KG+  + + Y  L
Sbjct: 309 DEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVL 368

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + + + A ++F++M       D   Y   +DGLC NGY+ +A+ +F+ +R  + 
Sbjct: 369 IQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREM 428

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +++I  Y  +I G+CK G+++ A++LF SL    +  +V+TY  MI   C  G + +A  
Sbjct: 429 DINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADA 488

Query: 362 LFLDME 367
           LF  M+
Sbjct: 489 LFKKMK 494



 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 201/365 (55%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF ++++ G  P ++T N ++N +CR+     A     +M     E      P+ VT+T
Sbjct: 103 SLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFE------PDLVTFT 156

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           +++ G C    ++ A  LF ++      PNVVTY +LIH  C     N A  +F +M D 
Sbjct: 157 SLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDN 216

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++PNVV++N +++ LC+ G+  +A+ LL  M++ G++PN   +  L+D F   G++  A
Sbjct: 217 GIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEA 276

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +EL+  M  M    +VF+Y+ LING C    ++ A  ++  M S G  P+ V Y TL  G
Sbjct: 277 KELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHG 336

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  +VE   K+F EM + G+ A+T  Y   I G C  G    A E+F  +   +   D
Sbjct: 337 FCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPD 396

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           IR YN L+DGLC +G ++ A  +F+ + +  +  ++VTY I+I  +C  GK++ A DLF 
Sbjct: 397 IRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFC 456

Query: 365 DMEAK 369
            + +K
Sbjct: 457 SLFSK 461



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 171/332 (51%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL+LF  M +          P+ V +T ++  + K    D    LF +M+   I+P + T
Sbjct: 66  ALDLFTRMVHSRP------LPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYT 119

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            N +++  C ++    A C   +MM  G +P++V+F  +++  C   ++++A  L + ++
Sbjct: 120 CNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIV 179

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G RPN   Y TL+   C    +N A E+F  M   G + NV +Y+ L++G C+     
Sbjct: 180 GMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWS 239

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ +GI+P+V+ +  L     ++ ++  A +L+  M +  V  D + Y   I
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALI 299

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC  G + EA ++F  +    Y  +   Y  LI G CKS R++   ++F  + +  L+
Sbjct: 300 NGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLV 359

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A+ +TY ++I   C  G+ D A+++F  M ++
Sbjct: 360 ANTITYTVLIQGYCLVGRPDVAQEVFNQMGSR 391



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 154/293 (52%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A +LF +M      P++V +  L+        ++    LF +M   G+ P + + N++
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           MN +C++ +   AS  L  M+++G  P+   + +L+ GFC   R+  A  LF  +  MG 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV +Y+ LI+  CKN+ +  A+ ++++M   GI+P+VV YN+L  GL EI +   A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M + G+  +   +   ID   K G I+EA EL++ +  +    D+  Y  LI+GLC
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLC 303

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             GRL  A ++F  +       + VTY  +IH  C   +++    +F +M  K
Sbjct: 304 TYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQK 356



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 136/264 (51%), Gaps = 6/264 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA L   +   G +PNV T+  LI+   + G  + A  L++ M        +   P+  
Sbjct: 240 DAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQ------MSVYPDVF 293

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I+GLC  G +D+A+++F  M+     PN VTY +LIHGFC +    +   +F EM
Sbjct: 294 TYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEM 353

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N +++ V++   C  G+ D A  +   M      P+   YN L+DG C  G V
Sbjct: 354 SQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYV 413

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +F  M       N+ +Y+I+I G CK  ++E A  L+  + SKG+KP+V+ Y T+
Sbjct: 414 EKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTM 473

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG 265
             G      +  A  LF +M+  G
Sbjct: 474 ISGFCRRGFIHEADALFKKMKEDG 497



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 128/234 (54%), Gaps = 6/234 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L+  +      P+VFTY  LINGLC  G    A  +F  M + NG +     PN 
Sbjct: 274 MEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMES-NGYY-----PNE 327

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYTT+I G CK   V+   ++F +M  + +  N +TY  LI G+C     + A+ +F +
Sbjct: 328 VTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQ 387

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +   P++ ++NV+++ LC NG +++A  + + M +  +  N   Y  ++ G C  G+
Sbjct: 388 MGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGK 447

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           V  A +LF S+ S G K NV +Y+ +I+G+C+   I  A +L+ +M   G  P+
Sbjct: 448 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 142/271 (52%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y  ++    +   +NEA  LF  M+     P++V F  +++ + K  + D    L E M 
Sbjct: 50  YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQ 109

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G+ P  +  N +M+  C + +  RA      M  +G + ++ +++ L++G+C    IE
Sbjct: 110 ILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIE 169

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL+L+ +++  G +P+VV Y TL   L +   +  A ++F++M  +G+  +   Y + +
Sbjct: 170 DALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLV 229

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            GLC+ G   +A  L R +     + ++  +  LID   K G++  A EL++ + +  + 
Sbjct: 230 SGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVY 289

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            DV TY  +I+ LC  G++D+AR +F  ME+
Sbjct: 290 PDVFTYTALINGLCTYGRLDEARQMFYLMES 320



 Score = 97.8 bits (242), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 6/166 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +   +F ++   G   N  TY  LI G C  G   VA  +F +M +          P+  
Sbjct: 345 DGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAP------PDIR 398

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++DGLC  G+V+KA  +F  M+   ++ N+VTY  +I G C      +A  LF  +
Sbjct: 399 TYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSL 458

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
             +G++PNV+++  +++  C+ G + EA  L + M + G  PN  V
Sbjct: 459 FSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNESV 504


>gi|242067351|ref|XP_002448952.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
 gi|241934795|gb|EES07940.1| hypothetical protein SORBIDRAFT_05g002320 [Sorghum bicolor]
          Length = 455

 Score =  258 bits (658), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 133/354 (37%), Positives = 209/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N   +   + G    A+++F +M     + G+   P+ V+Y  +ID LCK 
Sbjct: 25  GISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMR----QHGL--SPDAVSYGALIDALCKL 78

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A+  F +M +E + PN+V ++SL++G C  + W + + LF EM++ G+ PN+V F
Sbjct: 79  GRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFF 138

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I+  LCK G++ E  RL++ +  +GVRP+   YNTL+DG CL G ++ A +L   M S
Sbjct: 139 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 198

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K N FSY+ L++GYCK   I+ A SL+ +MLS GI P VV YNT+  GLF+  +   
Sbjct: 199 VGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 258

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M   G     + Y T ++GLCK+  + EA ++F++L     +L+I  +  +I 
Sbjct: 259 AKELYLNMINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 318

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR + A +LF ++P   L+ DVVTY ++   L  +G +++   LF  ME
Sbjct: 319 ALLKGGRKEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAME 372



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 102/312 (32%), Positives = 170/312 (54%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            PN   +        K G +DKA ++F KM+   ++P+ V+Y +LI   C     ++A+ 
Sbjct: 27  SPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPDAVSYGALIDALCKLGRVDDAEV 86

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            F +M+++GV PN+V F+ ++  LC   K ++   L   M+ +G+ PN   +NT++   C
Sbjct: 87  KFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLC 146

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GRV   + L  S+E MG + +V SY+ LI+G+C    I+ A  L   M+S G+KP+  
Sbjct: 147 KEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPNSF 206

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YNTL  G  +  +++ A+ LF +M  +G+      Y T + GL +     EA EL+  +
Sbjct: 207 SYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 266

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                +  I  YN +++GLCKS  +  A+++F+SL    L  +++T+ IMI AL   G+ 
Sbjct: 267 INSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRK 326

Query: 357 DKARDLFLDMEA 368
           + A DLF  + A
Sbjct: 327 EDAMDLFAAIPA 338



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 140/266 (52%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           ++HG+      +E   L   M+  G+ PN   FN+  +   K G +D+A  +   M Q G
Sbjct: 1   MLHGYGNKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 60

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + P+A  Y  L+D  C  GRV+ AE  F  M + G   N+  +S L+ G C   + E   
Sbjct: 61  LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFSSLVYGLCSIDKWEKVE 120

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L+ EML+ GI P++V +NT+   L +  +V    +L D ++  GV  D  +Y T IDG 
Sbjct: 121 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 180

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           C  G I EA +L   +  +  + +  +YN L+ G CK+GR+  A+ LFR +    +   V
Sbjct: 181 CLAGTIDEASKLLEGMVSVGLKPNSFSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGV 240

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           VTYN ++H L    +  +A++L+L+M
Sbjct: 241 VTYNTILHGLFQTKRFSEAKELYLNM 266



 Score =  147 bits (371), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 142/299 (47%), Gaps = 6/299 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME   L   +   G  P+V +YNTLI+G C  G    A  L E M +      V  KPN+
Sbjct: 152 MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS------VGLKPNS 205

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y T++ G CK G +D A  LF KM    I P VVTYN+++HG      ++EAK L++ 
Sbjct: 206 FSYNTLLHGYCKAGRIDSAYSLFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 265

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G +  + ++N I+N LCK+  +DEA ++ + +   G++ N   +  ++      GR
Sbjct: 266 MINSGTKWGIYTYNTILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 325

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   +V +Y ++     +   +E   SL+S M   G  P+  + N 
Sbjct: 326 KEDAMDLFAAIPANGLVPDVVTYRVVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 385

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L   L     + RA     ++     + +       I     + Y   A  L +  RIL
Sbjct: 386 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRIL 444


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  258 bits (658), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 139/354 (39%), Positives = 210/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ +T+N LI      G    A+ +F EM     + GV  KP+ VTY T+I  LC+ 
Sbjct: 392 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR----DHGV--KPDVVTYRTVIAALCRI 445

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F +M D+ + P+   YN LI GFC      +AK L  E+M+ G+  ++V F
Sbjct: 446 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 505

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I+N LCK G++ +A  + +L + +G+ P+A VYN LMDG+CL G++ +A  +F +M S
Sbjct: 506 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 565

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV  Y  L+NGYCK   I+  LSL+ EML +GIKP  ++Y+ +  GLFE  +   
Sbjct: 566 AGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVP 625

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   F EM   G+A D   Y   + GL KN    EA+ LF+ LR +  +++I   N +ID
Sbjct: 626 AKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 685

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+ ++ R++ A +LF S+ R  L+  VVTY+IMI  L  +G +++A D+F  M+
Sbjct: 686 GMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 739



 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 129/386 (33%), Positives = 197/386 (51%), Gaps = 39/386 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P+VF+Y+ L+  LC  G +  A +L   MA G    G VC PN V Y T+IDG  K
Sbjct: 179 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFK 234

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN----------------------- 109
           EG V+KA +LF +M    I P++VTYNS++H  C A                        
Sbjct: 235 EGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 294

Query: 110 ------------DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
                        W EA  +F EM    + P+VV+ +++M  LCK GK+ EA  + + M 
Sbjct: 295 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 354

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  P+ F YN +++G+   G +    +LF  M   G   + +++++LI  Y     ++
Sbjct: 355 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 414

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ +++EM   G+KPDVV Y T+   L  I +++ A + F++M   GVA D +AY   I
Sbjct: 415 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 474

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            G C +G +++A EL   +      LDI  ++ +I+ LCK GR+  A  +F       L 
Sbjct: 475 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 534

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
            D V YN+++   C  GKM+KA  +F
Sbjct: 535 PDAVVYNMLMDGYCLVGKMEKALRVF 560



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 90/308 (29%), Positives = 158/308 (51%), Gaps = 6/308 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + YN LI G C  G  + A  L  E+ N      +V       +++II+ LCK 
Sbjct: 462 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV------FFSSIINNLCKL 515

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +F    +  ++P+ V YN L+ G+C      +A  +F  M+  G++PNVV +
Sbjct: 516 GRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGY 575

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N  CK G++DE   L   M+Q G++P+  +Y+ ++DG    GR   A+  F  M  
Sbjct: 576 GTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTE 635

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ +Y+I++ G  KN+  + A+ L+ E+ +  +K +++  NT+  G+F+  +VE 
Sbjct: 636 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 695

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF  + R  +      Y   I  L K G + EA ++F +++    E + R  N ++ 
Sbjct: 696 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 755

Query: 314 GLCKSGRL 321
            L K   +
Sbjct: 756 ELLKKNEI 763



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 172/341 (50%), Gaps = 5/341 (1%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           CR+G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++   
Sbjct: 86  CRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 143

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDE 148
            +  N++  N L+ GFC A   +EA  + +    + G  P+V S+++++  LC  GK  +
Sbjct: 144 GLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 203

Query: 149 ASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    PN   YNT++DGF   G VN+A +LF  M   G   ++ +Y+ +
Sbjct: 204 ADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 263

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK + ++ A +   +M++K + P+   YN L  G     Q + A ++F EM+RH +
Sbjct: 264 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 323

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D       +  LCK G I EA ++F T+ +     D+ +YN +++G    G L    +
Sbjct: 324 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 383

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LF  +    +  D  T+N++I A    G +DKA  +F +M 
Sbjct: 384 LFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 424



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 155/332 (46%), Gaps = 9/332 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++   G   ++  ++++IN LC+ G  + A N+F+   N      V   P+ 
Sbjct: 484 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 537

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  ++DG C  G ++KA  +F  M    I PNVV Y +L++G+C     +E   LF E
Sbjct: 538 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFRE 597

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +++I++ L + G+   A      M + G+  +   YN ++ G      
Sbjct: 598 MLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 657

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A  LF  + +M  K N+ + + +I+G  + + +E A  L++ +    + P VV Y+ 
Sbjct: 658 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 717

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L +   VE A  +F  MQ  G   ++      +  L K   IV A      +    
Sbjct: 718 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 777

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + L+      L+D     G  +   E  R LP
Sbjct: 778 FSLEHLTAMLLVDLFSSKGTCR---EQIRFLP 806



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R N  + N L++GFC   R + A 
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSYSIL+   C   +   A  L   M   G    P+VV YNT+ 
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +   +  
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G   +G+ K A  +F+ + R  ++ DVVT ++++ +LC  GK+ +ARD+
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 350 FDTMAMK 356


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  258 bits (658), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 131/354 (37%), Positives = 202/354 (57%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + ++ LI    + G    A+ +F +M            PN VTY  +I  LCK 
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPNAVTYGAVIGILCKS 419

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIHG C  N W  A+ L +EM+D+G+  N + F
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L ELM++IGV+PN   YNTL++G+CL G+++ A +L   M S
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K N  +YS LINGYCK   +E AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +   Y   + GLCKN    +A+++F+ L ++  +L+ R +N +ID
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR   A +LF +     L+ +  TY +M   +   G +++   LFL ME
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 211/431 (48%), Gaps = 73/431 (16%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   GC PNVF+YN L+ GLC    +  AL L   MA+  G       P+ V+YTT+I+
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVIN 204

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI-------------------------- 102
           G  KEG  DKA   + +M D  I P+VVTYNS+I                          
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 103 ---------HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR-- 151
                    HG+C +    EA     +M   GV+P+VV+++++M+ LCKNG+  EA +  
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 152 ---------------------------------LLELMIQIGVRPNAFVYNTLMDGFCLT 178
                                            LL+LM++ G+ P+ +V++ L+  +   
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+V++A  +F  M   G   N  +Y  +I   CK+  +E A+  + +M+ +G+ P  ++Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L  GL   ++ ERA +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + ++  YN LI+G C +G++  A +L   +    L  + VTY+ +I+  C   +M+ 
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564

Query: 359 ARDLFLDMEAK 369
           A  LF +ME+ 
Sbjct: 565 ALVLFKEMESS 575



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EP+V TY+ L++ LC+ G  + A  +F+ M           KP   
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG------LKPEIT 337

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+P+   ++ LI  +      ++A  +F +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN V++  ++  LCK+G++++A    E MI  G+ P   VYN+L+ G C   + 
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RAEEL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP+V+ YNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A KL   M   G+  +T  Y T I+G CK   + +A+ LF+ +     
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D A  
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 362 LFLDM 366
           +F ++
Sbjct: 638 MFQNL 642



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 173/352 (49%), Gaps = 29/352 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  +F K+R  G  PN  TY  +I  LC++G    A+  FE+M +     G +      
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 56  -----CKP------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                C                    NT+ + +IID  CKEG V ++++LF  M    + 
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNV+TYN+LI+G+C A   +EA  L   M+  G++PN V+++ ++N  CK  +M++A  L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M   GV P+   YN ++ G   T R   A+EL+V +   G +  + +Y+I+++G CK
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           NK  + AL ++  +    +K +   +N +   L ++ + + A  LF     +G+  + W 
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           YR   + +   G + E  +LF ++      +D    N ++  L + G +  A
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 6/285 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +PNV TYNTLING C  G    A+ L   M +      V  KPNT
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS------VGLKPNT 546

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   D+A ++ + +  + ++  A  +N ++D     GR
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LFV+  S G   N ++Y ++         +E    L+  M   G   D  + N 
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771



 Score =  131 bits (329), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 167/372 (44%), Gaps = 8/372 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G   +++  N  +  + R      A++ +  MA    +      P+  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGAD---EVTPDLC 88

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I   C+ G +D        +  +    + + +  L+ G C     ++A  + +  
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFCL 177
           M + G  PNV S+N+++  LC   +  EA  LL +M      G  P+   Y T+++GF  
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G  ++A   +  M   G   +V +Y+ +I   CK + ++ A+ + + M+  G+ PD + 
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN++  G     Q + A     +M+  GV  D   Y   +D LCKNG  +EA ++F ++ 
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +I  Y  L+ G    G L     L   + R  +  D   ++I+I A    GK+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388

Query: 358 KARDLFLDMEAK 369
           +A  +F  M  +
Sbjct: 389 QAMLVFSKMRQQ 400



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 10/315 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N   +N++I+  C+ G  I +  LFE M       GV  KPN +TY T+I+G C  G +D
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMV----RIGV--KPNVITYNTLINGYCLAGKMD 528

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A +L   M    + PN VTY++LI+G+C  +   +A  LF EM   GV P+++++N+I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             L +  +   A  L   + + G +     YN ++ G C     + A ++F ++  M  K
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
               +++I+I+   K    + A  L+    S G+ P+   Y  +   +     +E   +L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M+ +G   D+      +  L + G I  A      +    + L+    +  ID L  
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 767

Query: 318 SGRLKIAWELFRSLP 332
            G+ +   E +R LP
Sbjct: 768 GGKYQ---EYYRFLP 779


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 137/356 (38%), Positives = 208/356 (58%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +  +Y TLINGLC+TG T     L  ++       G   KP+ V Y TII+ LCK 
Sbjct: 157 GFQLDQVSYGTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIINSLCKN 210

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +  A +++ +M  + I+P+VVTY +LIHGFC      EA  L  EM  + + PNV +F
Sbjct: 211 KLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTF 270

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ L K GKM EA  LL +M++  ++P+ F YN+L+DG+ L   V  A+ +F SM  
Sbjct: 271 NILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQ 330

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V  Y+ +ING CK K ++ A+SL+ EM  K + PD+V YN+L  GL + H +ER
Sbjct: 331 RGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLER 390

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L   M+  G+  D ++Y   +DGLCK+G + +A E+F+ L    Y L++ AY  LI+
Sbjct: 391 AIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLIN 450

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LCK+G    A +L   +     + D VT++I+I AL    + DKA  +  +M A+
Sbjct: 451 RLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIAR 506



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF +    G  P++ T + LIN  C   H  +A ++F  +            PN +T  
Sbjct: 78  SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFH------PNAITLN 131

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC  G + KA     ++  +    + V+Y +LI+G C   +      L  ++   
Sbjct: 132 TLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGH 191

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P+VV +N I+N LCKN  + +A  +   MI  G+ P+   Y TL+ GFC+ G +  A
Sbjct: 192 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEA 251

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M+      NV +++ILI+   K  +++ A  L + M+   IKPDV  YN+L  G
Sbjct: 252 FSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDG 311

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            F + +V+ A  +F  M + GV  D   Y   I+GLCK   + EA+ LF  ++      D
Sbjct: 312 YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPD 371

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  YN LIDGLCK+  L+ A  L + +    +  DV +Y I++  LC  G+++ A+++F 
Sbjct: 372 IVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQ 431

Query: 365 DMEAK 369
            + AK
Sbjct: 432 RLLAK 436



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 152/300 (50%), Gaps = 41/300 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++ ++ V G  P+V TY TLI+G C  GH   A +L  EM   N        PN  
Sbjct: 215 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKN------INPNVC 268

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF---------------- 105
           T+  +ID L KEG + +AK L   M    I P+V TYNSLI G+                
Sbjct: 269 TFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSM 328

Query: 106 ----------CYANDWN---------EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                     CY N  N         EA  LF EM  + + P++V++N +++ LCKN  +
Sbjct: 329 AQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHL 388

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           + A  L + M + G++P+ + Y  L+DG C +GR+  A+E+F  + + G   NV +Y++L
Sbjct: 389 ERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVL 448

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK    + AL L S+M  KG  PD V ++ +   LFE  + ++A K+  EM   G+
Sbjct: 449 INRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 151/312 (48%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P T  +  I+  L           LF + +   I P++ T + LI+ FC+      A  +
Sbjct: 55  PPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 114

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G  PN ++ N ++  LC  G++ +A    + ++  G + +   Y TL++G C 
Sbjct: 115 FANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCK 174

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           TG       L   +E    K +V  Y+ +IN  CKNK +  A  +YSEM+ KGI PDVV 
Sbjct: 175 TGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 234

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G   +  ++ AF L +EM+   +  +   +   ID L K G + EA  L   + 
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+  YN LIDG      +K A  +F S+ +  +  DV  Y  MI+ LC    +D
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354

Query: 358 KARDLFLDMEAK 369
           +A  LF +M+ K
Sbjct: 355 EAMSLFEEMKHK 366



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 102/215 (47%)

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           LM+ +   P  F +N ++              LF   E  G   ++ + SILIN +C   
Sbjct: 47  LMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQA 106

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            I  A S+++ +L +G  P+ +  NTL  GL    ++++A    D++   G   D  +Y 
Sbjct: 107 HITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYG 166

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I+GLCK G       L R L     + D+  YN +I+ LCK+  L  A +++  +   
Sbjct: 167 TLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK 226

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  DVVTY  +IH  C  G + +A  L  +M+ K
Sbjct: 227 GISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLK 261


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  256 bits (655), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 132/354 (37%), Positives = 210/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +N +     +      A+++F++M            PN VTY  +ID LCK 
Sbjct: 337 GVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR------LSPNIVTYGALIDALCKL 390

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F +M DE + P++  ++SL++G C  + W +A+ LF E++DQG++ + V F
Sbjct: 391 GRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFF 450

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +M  LC+ G++ EA RL++LM+++GVRP+   YNTL+DG CLTGR++ A +L   + S
Sbjct: 451 NTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS 510

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K +  +Y+ L++GYCK + I+ A SL+ EML KG+ PDVV YNT+  GLF+  +   
Sbjct: 511 IGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSE 570

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M       + + Y   I+GLCKN ++ EA ++F +L     +LDI   N +I 
Sbjct: 571 AKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIG 630

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR + A +LF ++    L+ DV TY ++   L  +G +++  +LF  ME
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAME 684



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 202/400 (50%), Gaps = 40/400 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTVTYT 64
           L  ++  FGC P+VF+Y+ L+ G C       AL L   MA+ G+G       PN VTYT
Sbjct: 151 LLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSH----TPNVVTYT 206

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+IDGLCK   VD+AK +F  M D+ + PN  TY  LIHG+     W E   +  EM   
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTH 266

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR---- 180
           G+QP+   + V+++ LCKNG+  EA  + + +I+ G++PN  +Y  L+ G+   G     
Sbjct: 267 GLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEM 326

Query: 181 -------------------------------VNRAEELFVSMESMGCKHNVFSYSILING 209
                                          ++ A  +F  M       N+ +Y  LI+ 
Sbjct: 327 HSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDA 386

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   ++ A+  +++M+ +G+ PD+ ++++L  GL  + + E+A +LF E+   G+  D
Sbjct: 387 LCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLD 446

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
           T  + T +  LC+ G ++EA  L   +  +    D+ +YN L+DG C +GR+  A +L  
Sbjct: 447 TVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +    L  D VTYN ++H  C   ++D A  LF +M  K
Sbjct: 507 VIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMK 546



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 199/367 (54%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G +PNV  Y  L++G    G ++  ++ F ++  GNG       P+  
Sbjct: 290 EARNIFDSVIRKGIKPNVTIYGILLHGYATEG-SLSEMHSFLDLMVGNG-----VSPDHH 343

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +     K+  +D+A  +F KM+ + ++PN+VTY +LI   C     ++A   F +M
Sbjct: 344 IFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQM 403

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ P++  F+ ++  LC   K ++A  L   ++  G+R +   +NTLM   C  GRV
Sbjct: 404 IDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRV 463

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ L   M  +G + +V SY+ L++G+C    I+ A  L   ++S G+KPD V YNTL
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTL 523

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++ A+ LF EM   G+  D   Y T + GL + G   EA EL+ ++   + 
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRT 583

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +++I  YN +I+GLCK+  +  A+++F SL    L  D+ T NIMI AL   G+ + A D
Sbjct: 584 QMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMD 643

Query: 362 LFLDMEA 368
           LF  + A
Sbjct: 644 LFATISA 650



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   +  ++   G +P+ + Y  L++ LC+ G    A N+F+ +           KPN  
Sbjct: 255 EVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKG------IKPNVT 308

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  ++ G   EG + +       M    ++P+   +N +   +      +EA  +F +M
Sbjct: 309 IYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKM 368

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q + PN+V++  +++ LCK G++D+A      MI  G+ P+ FV+++L+ G C   + 
Sbjct: 369 RQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKW 428

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +AEELF  +   G + +   ++ L+   C+   +  A  L   ML  G++PDV+ YNTL
Sbjct: 429 EKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTL 488

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A KL D +   G+  D   Y T + G CK   I +A  LFR + +   
Sbjct: 489 VDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGL 548

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN ++ GL ++GR   A EL+ S+       ++ TYNI+I+ LC +  +D+A  
Sbjct: 549 TPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFK 608

Query: 362 LFLDMEAK 369
           +F  + +K
Sbjct: 609 MFHSLCSK 616



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 173/359 (48%), Gaps = 19/359 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP-----NTVTYTTIIDGLC 71
           P+ FTY  LI   CR G           + +G   FG++ K      +TV ++ ++ GLC
Sbjct: 90  PSSFTYTILIGCFCRMG----------RLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLC 139

Query: 72  KEGFVDKAKELFL-KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG---VQ 127
               VD+A ++ L +M +    P+V +Y+ L+ GFC      EA  L   M D G     
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHT 199

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PNVV++  +++ LCK   +D A  + + MI  GVRPN   Y  L+ G+   G+     ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQM 259

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M + G + + + Y++L++  CKN     A +++  ++ KGIKP+V IY  L  G   
Sbjct: 260 LQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYAT 319

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
              +       D M  +GV+ D   +        K   I EA+ +F  +R  +   +I  
Sbjct: 320 EGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVT 379

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y  LID LCK GR+  A   F  +    +  D+  ++ +++ LC   K +KA +LF ++
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEV 438



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+R     PN+ TY  LI+ LC+ G    A+  F +M +          P+  
Sbjct: 360 EAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEG------MTPDIF 413

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +++++ GLC     +KA+ELF ++ D+ I  + V +N+L+   C      EA+ L   M
Sbjct: 414 VFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLM 473

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+P+V+S+N +++  C  G++DEA++LL++++ IG++P+   YNTL+ G+C   R+
Sbjct: 474 LRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRI 533

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M   G   +V +Y+ +++G  +      A  LY  M++   + ++  YN +
Sbjct: 534 DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNII 593

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + + V+ AFK+F  +    +  D +     I  L K G   +A++LF T+     
Sbjct: 594 INGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGL 653

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D+  Y  + + L K G L+   ELF ++       +    N ++  L   G +++A
Sbjct: 654 VPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRA 711



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 167/331 (50%), Gaps = 10/331 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G   +   +NTL+  LCR G  + A  L + M        V  +P+ +
Sbjct: 430 KAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLM------LRVGVRPDVI 483

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T++DG C  G +D+A +L   +    + P+ VTYN+L+HG+C A   ++A  LF EM
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREM 543

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+VV++N I++ L + G+  EA  L   MI    + N + YN +++G C    V
Sbjct: 544 LMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFV 603

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F S+ S   + ++F+ +I+I    K    E A+ L++ + + G+ PDV  Y  +
Sbjct: 604 DEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLI 663

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   +E   +LF  M+ +G A ++      +  L   G I  A      L    +
Sbjct: 664 AENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDEKNF 723

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            L+    + LI  +   G  +   +L +SLP
Sbjct: 724 SLEASTTSMLI-SIYSRGEYQ---QLAKSLP 750



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 131/254 (51%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L   +   G  P+V +YNTL++G C TG    A  L + + +      +  KP+ 
Sbjct: 464 MEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVS------IGLKPDK 517

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ G CK   +D A  LF +M  + + P+VVTYN+++HG      ++EAK L++ 
Sbjct: 518 VTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   Q N+ ++N+I+N LCKN  +DEA ++   +    ++ + F  N ++      GR
Sbjct: 578 MINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGR 637

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   +V +Y ++     K   +E    L+S M   G  P+  + N 
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 698 LVRWLLHRGDINRA 711



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 130/302 (43%), Gaps = 49/302 (16%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL----ELMIQ---IGVRPN 164
           N+A  LF EM+      +V +FN ++  + +  +   AS L+      MI+   I V P+
Sbjct: 33  NDALKLFDEMLTHARPASVRAFNQLLTAVSR-ARCSSASELVVSLFNRMIRECSIKVAPS 91

Query: 165 AFVYNTLMDGFCLTGRV---------------------------------NRAEE----L 187
           +F Y  L+  FC  GR+                                  R +E    L
Sbjct: 92  SFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDIL 151

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVIYNTLFIG 244
              M   GC  +VFSYSIL+ G+C  K  E AL L S M   G     P+VV Y T+  G
Sbjct: 152 LRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDG 211

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +   V+RA  +F  M   GV  +   Y   I G    G   E V++ + +     + D
Sbjct: 212 LCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPD 271

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              Y  L+D LCK+GR   A  +F S+ R  +  +V  Y I++H    +G + +    FL
Sbjct: 272 CYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHS-FL 330

Query: 365 DM 366
           D+
Sbjct: 331 DL 332


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 131/354 (37%), Positives = 201/354 (56%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + ++ LI      G    A+ +F +M            PN VTY  +I  LCK 
Sbjct: 366 GIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQG------LNPNAVTYGAVIGILCKS 419

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIHG C  N W  A+ L +EM+D+G+  N + F
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L ELM++IGV+PN   YNTL++G+CL G+++ A +L   M S
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K N  +YS LINGYCK   +E AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +   Y   + GLCKN    +A+++F+ L ++  +L+ R +N +ID
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR   A +LF +     L+ +  TY +M   +   G +++   LFL ME
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 211/431 (48%), Gaps = 73/431 (16%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   GC PNVF+YN L+ GLC    +  AL L   MA+  G       P+ V+YTT+I+
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVIN 204

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI-------------------------- 102
           G  KEG  DKA   + +M D  I P+VVTYNS+I                          
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264

Query: 103 ---------HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR-- 151
                    HG+C +    EA     +M   GV+P+VV+++++M+ LCKNG+  EA +  
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324

Query: 152 ---------------------------------LLELMIQIGVRPNAFVYNTLMDGFCLT 178
                                            LL+LM++ G+ P+ +V++ L+  +   
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQ 384

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+V++A  +F  M   G   N  +Y  +I   CK+  +E A+  + +M+ +G+ P  ++Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L  GL   ++ ERA +L  EM   G+  +T  + + ID  CK G ++E+ +LF  +  
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + ++  YN LI+G C +G++  A +L   +    L  + VTY+ +I+  C   +M+ 
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564

Query: 359 ARDLFLDMEAK 369
           A  LF +ME+ 
Sbjct: 565 ALVLFKEMESS 575



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EP+V TY+ L++ LC+ G  + A  +F+ M           KP   
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG------LKPEIT 337

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+P+   ++ LI  +      ++A  +F +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN V++  ++  LCK+G++++A    E MI  G+ P   VYN+L+ G C   + 
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RAEEL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP+V+ YNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A KL   M   G+  +T  Y T I+G CK   + +A+ LF+ +     
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN ++ GL ++ R   A EL+  +       ++ TYNI++H LC +   D A  
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 362 LFLDM 366
           +F ++
Sbjct: 638 MFQNL 642



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 173/352 (49%), Gaps = 29/352 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  +F K+R  G  PN  TY  +I  LC++G    A+  FE+M +     G +      
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448

Query: 56  -----CKP------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                C                    NT+ + +IID  CKEG V ++++LF  M    + 
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNV+TYN+LI+G+C A   +EA  L   M+  G++PN V+++ ++N  CK  +M++A  L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M   GV P+   YN ++ G   T R   A+EL+V +   G +  + +Y+I+++G CK
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           NK  + AL ++  +    +K +   +N +   L ++ + + A  LF     +G+  + W 
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           YR   + +   G + E  +LF ++      +D    N ++  L + G +  A
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 6/285 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +PNV TYNTLING C  G    A+ L   M +      V  KPNT
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS------VGLKPNT 546

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   D+A ++ + +  + ++  A  +N ++D     GR
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LFV+  S G   N ++Y ++         +E    L+  M   G   D  + N 
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/372 (24%), Positives = 167/372 (44%), Gaps = 8/372 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G   +++  N  +  + R      A++ +  MA    +      P+  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGAD---EVTPDLC 88

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I   C+ G +D        +  +    + + +  L+ G C     ++A  + +  
Sbjct: 89  TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFCL 177
           M + G  PNV S+N+++  LC   +  EA  LL +M      G  P+   Y T+++GF  
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G  ++A   +  M   G   +V +Y+ +I   CK + ++ A+ + + M+  G+ PD + 
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN++  G     Q + A     +M+  GV  D   Y   +D LCKNG  +EA ++F ++ 
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +I  Y  L+ G    G L     L   + R  +  D   ++I+I A    GK+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVD 388

Query: 358 KARDLFLDMEAK 369
           +A  +F  M  +
Sbjct: 389 QAMLVFSKMRQQ 400



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 10/315 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N   +N++I+  C+ G  I +  LFE M       GV  KPN +TY T+I+G C  G +D
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMV----RIGV--KPNVITYNTLINGYCLAGKMD 528

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A +L   M    + PN VTY++LI+G+C  +   +A  LF EM   GV P+++++N+I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             L +  +   A  L   + + G +     YN ++ G C     + A ++F ++  M  K
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
               +++I+I+   K    + A  L+    S G+ P+   Y  +   +     +E   +L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M+ +G   D+      +  L + G I  A      +    + L+    +  ID L  
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 767

Query: 318 SGRLKIAWELFRSLP 332
            G+ +   E +R LP
Sbjct: 768 GGKYQ---EYYRFLP 779


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 134/358 (37%), Positives = 202/358 (56%), Gaps = 6/358 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L+  G E + +T   +INGLC+ GH+  AL+  ++M   N      C  +   Y+ ++DG
Sbjct: 122 LKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVTAYSAVVDG 175

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK+G V +A +LF +M  + I PN+ TYN LIHG C  + W EA  L   MM +G+ P+
Sbjct: 176 LCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 235

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V +FNVI     K G +  A  +   M  +G+  N   YN+++   C+  ++  A E+F 
Sbjct: 236 VQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFD 295

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   GC  N+ +Y+ LI+G+C+ K +  A+    EM++ G+ PDVV ++TL  G  +  
Sbjct: 296 LMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAG 355

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +   A +LF  M +HG   D       +DGL K  +  EA+ LFR L  +  +LDI  Y+
Sbjct: 356 KPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYS 415

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            +++G+C SG+L  A ELF  L    +  DVVTYNIMI+ LC +G +D A DL + ME
Sbjct: 416 IILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME 473



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 178/364 (48%), Gaps = 7/364 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G +PN+FTYN LI+GLC       A  L   M       G++  P+  
Sbjct: 184 EALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRK----GIM--PDVQ 237

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  I     K G + +AK +F  M    I  NVVTYNS+I   C  N   +A  +F  M
Sbjct: 238 TFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLM 297

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PN+V++N +++  C+   M++A   L  M+  G+ P+   ++TL+ GFC  G+ 
Sbjct: 298 IRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKP 357

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ELF  M   G   ++ + +I+++G  K      A+SL+ E+       D++IY+ +
Sbjct: 358 VAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSII 417

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    ++  A +LF  +   GV  D   Y   I+GLCK G + +A +L   +     
Sbjct: 418 LNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC 477

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN  + GL +   +  + +    +      A+  T  ++I+   A+ K ++A  
Sbjct: 478 PPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSAN-KENRAFQ 536

Query: 362 LFLD 365
           +FL 
Sbjct: 537 VFLQ 540



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 152/326 (46%), Gaps = 15/326 (4%)

Query: 34  HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
           H +V +  F  + + N  FG+V K     YTT I              L   M    + P
Sbjct: 15  HKMVTMKPFPCVKDFNLLFGIVAKMKH--YTTAI-------------SLIKHMSYIGVKP 59

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           NV T+N +I+  C  N       +   M   GV+P++V+F  I+N LC  G + +A R +
Sbjct: 60  NVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFV 119

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + +  +G   + +    +++G C  G  + A      ME   C  +V +YS +++G CK+
Sbjct: 120 DHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKD 179

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +  AL L+S+M  KGI+P++  YN L  GL    + + A  L   M R G+  D   +
Sbjct: 180 GMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF 239

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
                   K G I  A  +F  +  +  E ++  YN +I   C   ++K A E+F  + R
Sbjct: 240 NVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIR 299

Query: 334 GVLIADVVTYNIMIHALCADGKMDKA 359
              + ++VTYN +IH  C    M+KA
Sbjct: 300 KGCLPNIVTYNSLIHGWCETKNMNKA 325



 Score = 95.9 bits (237), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 92/186 (49%)

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L   M  +G K NV +++I+IN  C+        S+   M   G++P +V + T+  
Sbjct: 45  AISLIKHMSYIGVKPNVSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVN 104

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GL     V +A +  D ++  G  +D +     I+GLCK G+   A+   + +      L
Sbjct: 105 GLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNL 164

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D+ AY+ ++DGLCK G +  A +LF  +    +  ++ TYN +IH LC   +  +A  L 
Sbjct: 165 DVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLL 224

Query: 364 LDMEAK 369
            +M  K
Sbjct: 225 ANMMRK 230



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 3/181 (1%)

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
           V+M+   C   V  +++L     K K    A+SL   M   G+KP+V  +N +   L  +
Sbjct: 18  VTMKPFPC---VKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVSTHNIVINCLCRL 74

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
           +     F +   M + GV      + T ++GLC  G + +A+     L+ + YE D    
Sbjct: 75  NHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTR 134

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             +I+GLCK G    A    + +       DV  Y+ ++  LC DG + +A DLF  M  
Sbjct: 135 GAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTG 194

Query: 369 K 369
           K
Sbjct: 195 K 195


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/347 (39%), Positives = 208/347 (59%), Gaps = 6/347 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           +Y TLINGLC+TG T  AL +  ++       G++ +PN V Y TIID LCK+  V  A 
Sbjct: 171 SYGTLINGLCKTGETRAALQVLRKID------GLLVQPNVVMYNTIIDSLCKDKLVIHAS 224

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L  +M  + I P+VVTY +LI+G        EA  LF +M+ + ++P+V +FN++++ L
Sbjct: 225 DLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGL 284

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G+M +A  +L +MI+ GV  N   YN+LMDG+ L  + N+A  +F +M   G   +V
Sbjct: 285 CKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDV 344

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            SYSI+ING CK K ++ A++L+ EM SK + P+ V YN+L  GL +  ++  A+ L +E
Sbjct: 345 QSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNE 404

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G  AD   Y + +D LCKN  + +A+ L   ++    + +I  Y  L+DGLCK+GR
Sbjct: 405 MHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGR 464

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LK A  +++ L       DV  YN+M++ LC +G  D+A  L   ME
Sbjct: 465 LKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKME 511



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 154/298 (51%), Gaps = 29/298 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA  LF ++ +   +P+V+T+N L++GLC+ G    A N+   M     +  +V      
Sbjct: 257 EAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLM 316

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    P+  +Y+ +I+GLCK   VD+A  LF +M  +++ 
Sbjct: 317 DGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMA 376

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN VTYNSLI G       ++A  L  EM ++G   +V++++ +++ LCKN ++D+A  L
Sbjct: 377 PNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITL 436

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  +   G++PN + Y  L+DG C  GR+  A+ ++  +   G   +V  Y++++NG CK
Sbjct: 437 ITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCK 496

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
               + ALSL S+M   G  PD V Y TL   LFE  + ++A KL  EM   G A  +
Sbjct: 497 EGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGS 554



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 157/307 (51%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  I+  L K      A     +M+ + I P++ T+N LI+ FC+    N A  +  ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+ V+   ++  LC NGK+ EA    + +I  G   +   Y TL++G C TG   
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++   ++ +  + NV  Y+ +I+  CK+K +  A  L SEM+ K I PDVV Y TL 
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + +++ A  LF++M    +  D + +   +DGLCK G + +A  +   +     +
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +I  YN L+DG     +   A  +F ++ R  +  DV +Y+IMI+ LC    +D+A +L
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 363 FLDMEAK 369
           F +M +K
Sbjct: 367 FKEMHSK 373



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 36/241 (14%)

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V+P  F +N ++         + A      ME    + ++F+++ILIN +C    +  A 
Sbjct: 61  VQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAF 119

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           S+ +++   G  PD V   TL  GL    +V  A    D++   G   D  +Y T I+GL
Sbjct: 120 SVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGL 179

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS---------------------- 318
           CK G    A+++ R +  L  + ++  YN +ID LCK                       
Sbjct: 180 CKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDV 239

Query: 319 -------------GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
                        GRLK A  LF  +    +  DV T+NI++  LC +G+M KAR++   
Sbjct: 240 VTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAV 299

Query: 366 M 366
           M
Sbjct: 300 M 300



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/170 (29%), Positives = 85/170 (50%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           +F ++ +++   K      A+S   +M  K I+PD+  +N L      +  +  AF +  
Sbjct: 64  IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLA 123

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           ++ + G   DT    T I GLC NG + EA+     +    + LD  +Y  LI+GLCK+G
Sbjct: 124 KIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTG 183

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + A ++ R +   ++  +VV YN +I +LC D  +  A DL  +M  K
Sbjct: 184 ETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVK 233


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 144/376 (38%), Positives = 205/376 (54%), Gaps = 47/376 (12%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y TLINGLC+ G +I A  L +EM       G V KPN V Y  IID  CK+    KA++
Sbjct: 192 YGTLINGLCKIGRSIDAFQLLQEME------GQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           L+LK+ D  I+P+++TY SLI GFC    W E K L  EM+++ + PNV +FNV+++  C
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           + GKM EA  +  LM++ G +P+   +NTL+ G CL G V  A +LF ++   G   +V+
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           SY+ILI GYCK K I+ A+SL++EM  K +  D+V+Y++L  GL +  ++  A++LF  +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425

Query: 262 QRHGVAADTWAYRTFIDGLCK------------------------------NGY-----I 286
              G   +   Y   ID  CK                              NGY     I
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA+ L   ++      D   YN L DGLCKSGR+  AWELF+ +  G    DV TYN++
Sbjct: 486 REAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVL 545

Query: 347 IHALCADGKMDKARDL 362
           + A C      KA+D+
Sbjct: 546 LDAFC------KAQDV 555



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 195/371 (52%), Gaps = 14/371 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK----P 58
           A +L  ++   G  P++FT +  IN  C  G          EM       G+V K    P
Sbjct: 103 AISLLKQMVFKGVTPSIFTLSIWINCYCHLG----------EMGFAFSVLGIVLKRGYQP 152

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N +T TT++ GLC  G V KA +    +  + +  + V Y +LI+G C      +A  L 
Sbjct: 153 NNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLL 212

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  Q V+PN+V +N+I++  CK+    +A  L   ++ +G+ P+   Y +L+ GFC T
Sbjct: 213 QEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRT 272

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+    ++L   M +     NV+++++LI+ +C+  ++  A  +++ M+ +G +PD+V +
Sbjct: 273 GQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTF 332

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  G      V  A KLFD +   G+  D W+Y   I G CK   I EAV LF  +R 
Sbjct: 333 NTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRC 392

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
               LDI  Y+ LIDGLCKSGR+  AWELF ++       +V+TYNI+I A C    +D 
Sbjct: 393 KNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDM 452

Query: 359 ARDLFLDMEAK 369
             +LF  M  K
Sbjct: 453 GIELFKLMCGK 463



 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 193/356 (54%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PN  T  T++ GLC  G    A++  + +A        VC      Y T+I+GLCK 
Sbjct: 149 GYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVC------YGTLINGLCKI 202

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A +L  +M+ + + PN+V YN +I  FC      +A+ L+++++D G+ P+++++
Sbjct: 203 GRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTY 262

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++   C+ G+  E  +L+  M+   + PN + +N L+D FC  G++  A+ +F  M  
Sbjct: 263 TSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVK 322

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + ++ +++ LI+G+C +  +  A  L+  +  +GI PDV  Y  L IG  +  +++ 
Sbjct: 323 RGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDE 382

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF+EM+   +  D   Y + IDGLCK+G I  A ELF T+       ++  YN LID
Sbjct: 383 AVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILID 442

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             CK   + +  ELF+ +    L   V+TYNI+I+  C   ++ +A +L   M++K
Sbjct: 443 AFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSK 498



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 154/312 (49%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ + + TII  + K      A  L  +M  + + P++ T +  I+ +C+  +   A  +
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              ++ +G QPN ++   +M  LC NG++ +A    + +   G+  +   Y TL++G C 
Sbjct: 142 LGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCK 201

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR   A +L   ME    K N+  Y+++I+ +CK++    A  LY +++  GI PD++ 
Sbjct: 202 IGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILT 261

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y +L  G     Q     +L  EM    +  + + +   ID  C+ G ++EA  +F  + 
Sbjct: 262 YTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMV 321

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + DI  +N LI G C  G +  A +LF ++    ++ DV +Y I+I   C   ++D
Sbjct: 322 KRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRID 381

Query: 358 KARDLFLDMEAK 369
           +A  LF +M  K
Sbjct: 382 EAVSLFNEMRCK 393



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 124/216 (57%), Gaps = 6/216 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   G  P+V++Y  LI G C+      A++LF EM   N    +V     
Sbjct: 346 LEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIV----- 400

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y+++IDGLCK G +  A ELF  + ++   PNV+TYN LI  FC   D +    LF  
Sbjct: 401 -LYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKL 459

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ P V+++N+++N  CK+ ++ EA  LL +M    + P++  YN+L DG C +GR
Sbjct: 460 MCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGR 519

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           ++ A ELF  M   G   +V +Y++L++ +CK +++
Sbjct: 520 ISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 139/288 (48%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF  + +    P+V+ +N++I           A  L  +M+ +GV P++ + ++
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
            +N  C  G+M  A  +L ++++ G +PN     T+M G C+ G V +A +   ++ + G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +   Y  LING CK      A  L  EM  + +KP++VIYN +     +     +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L+ ++   G+  D   Y + I G C+ G   E  +L   +       ++  +N LID  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           C+ G++  A  +F  + +     D+VT+N +I   C  G + +AR LF
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLF 352



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 127/255 (49%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N  ++A  LF  +++    P+V+ FN I+  + K      A  LL+ M+  GV P+ F  
Sbjct: 63  NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTL 122

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           +  ++ +C  G +  A  +   +   G + N  + + ++ G C N E++ A+  +  + +
Sbjct: 123 SIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAA 182

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G+  D V Y TL  GL +I +   AF+L  EM+   V  +   Y   ID  CK+    +
Sbjct: 183 QGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCK 242

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A +L+  +  +  + DI  Y  LI G C++G+     +L   +    +  +V T+N++I 
Sbjct: 243 ARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLID 302

Query: 349 ALCADGKMDKARDLF 363
           A C  GKM +A+ +F
Sbjct: 303 AFCRKGKMIEAQGMF 317



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 104/224 (46%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A  L   +I +   P+   +NT++           A  L   M   G   ++F+ SI
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            IN YC   E+  A S+   +L +G +P+ +   T+  GL    +V++A    D +   G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D   Y T I+GLCK G  ++A +L + +     + +I  YN +ID  CK      A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +L+  +    +  D++TY  +I   C  G+  + + L  +M  K
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNK 288


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  254 bits (650), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 208/366 (56%), Gaps = 12/366 (3%)

Query: 8   MKLRVF------GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           M L+VF       C P+V  Y+TLI GLC+TG    A  LFE+M   +      C+P+ V
Sbjct: 165 MALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENS------CEPDVV 218

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T ++DGLCK   + +A+++   M+D N  PNV+TY+SLI G C      +A+ +F  M
Sbjct: 219 TFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++PNVV++N +++  C    +D A  L+E M   G  P+   YNTL+DG C TGR 
Sbjct: 279 IVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRA 338

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M++  C  +V +YS LI G+CK + I+ A +L+ +ML + + PDVV ++TL
Sbjct: 339 PEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTL 398

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      V+ A +L +EM     + D + Y + +DG CK G +VEA  + + +     
Sbjct: 399 VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGC 458

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  Y  LID  C++G+  +A++L   +    +  +V+TY  +I   C  G +++AR 
Sbjct: 459 QPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARK 518

Query: 362 LFLDME 367
           +   +E
Sbjct: 519 MLERLE 524



 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 201/366 (54%), Gaps = 6/366 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  +++  G  PNV TY+T+I+G CR      A  LF +M   NG     C PN VT
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVT 114

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++ GLC+ G +D+A EL  +M++  + P+  +Y++L+ G C     + A  +F +  
Sbjct: 115 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 174

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +    P+VV+++ ++  LCK G++DEA +L E M +    P+   +  LMDG C   R+ 
Sbjct: 175 NGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 234

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+++  +ME   C  NV +YS LI+G CK  ++  A  ++  M+ +GI+P+VV YN+L 
Sbjct: 235 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 294

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G    + V+ A  L +EM   G   D   Y T IDGLCK G   EA  LF  ++     
Sbjct: 295 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 354

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y+CLI G CK  R+ +A  LF  + +  ++ DVVT++ ++   C  G +D A  L
Sbjct: 355 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 414

Query: 363 FLDMEA 368
             +M A
Sbjct: 415 LEEMVA 420



 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 200/355 (56%), Gaps = 6/355 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           CE NV T+  +I+GLC+      A   F +M       G V  PN  TY  +I+G CK  
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK----GTV--PNEWTYNVLINGFCKVH 56

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            V +A  L  +MK+  + PNVVTY+++IHGFC     + A  LF +M++ G  PN+V++N
Sbjct: 57  KVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYN 116

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ LC+NG MDEA  LL+ M + G++P+ F Y+TLM G C TG+++ A ++F    + 
Sbjct: 117 TLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNG 176

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
            C  +V +YS LI G CK   ++ A  L+ +M     +PDVV +  L  GL +  +++ A
Sbjct: 177 DCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEA 236

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            ++ + M+      +   Y + IDGLCK G + +A E+F+ + +   E ++  YN LI G
Sbjct: 237 QQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHG 296

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            C +  +  A  L   +     + D++TYN +I  LC  G+  +A  LF DM+AK
Sbjct: 297 FCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 351



 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/364 (35%), Positives = 197/364 (54%), Gaps = 10/364 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++ V G EPNV TYN+LI+G C T     AL L EEM          C P+ +
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT------ATGCLPDII 323

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDGLCK G   +A  LF  MK +  NP+V+TY+ LI GFC     + A+ LF +M
Sbjct: 324 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 383

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q V P+VV+F+ ++   C  G +D+A RLLE M+     P+ + Y +L+DGFC  GR+
Sbjct: 384 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 443

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M   GC+ NV +Y+ LI+ +C+  +   A  L  EM+  G++P+V+ Y +L
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503

Query: 242 FIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
             G      +E A K+ + ++R     AD +AYR  +DGLC+ G +  A+EL   ++   
Sbjct: 504 IGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 563

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFR--SLPRGVLIADVVTYNIMIHALCADGKMDK 358
                  Y  LI GLC+   L  A E+    +L R     +   Y  +I  L  +G+ ++
Sbjct: 564 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR-PNAEAYEAVIQELAREGRHEE 622

Query: 359 ARDL 362
           A  L
Sbjct: 623 ANAL 626



 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/401 (32%), Positives = 205/401 (51%), Gaps = 42/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+R   CEP+V T+  L++GLC+      A  + E M + N      C PN +
Sbjct: 200 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN------CTPNVI 253

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++IDGLCK G V  A+E+F +M    I PNVVTYNSLIHGFC  N  + A  L  EM
Sbjct: 254 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 313

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASR------------------------------ 151
              G  P+++++N +++ LCK G+  EA+R                              
Sbjct: 314 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 373

Query: 152 -----LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                L + M++  V P+   ++TL++G+C  G V+ AE L   M +  C  +V++Y+ L
Sbjct: 374 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 433

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G+CK   +  A  +   M  +G +P+VV Y  L        +   A+KL +EM  +GV
Sbjct: 434 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGV 493

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLKIAW 325
             +   YR+ I G C  G + EA ++   L R    + D+ AY  ++DGLC++GR+  A 
Sbjct: 494 QPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAAL 553

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           EL  ++ +         Y  +I  LC   ++ KA ++  +M
Sbjct: 554 ELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 594



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 129/247 (52%), Gaps = 8/247 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V T++TL+ G C  G    A  L EEM   +      C P+  TYT+++DG CK G +
Sbjct: 390 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD------CSPDVYTYTSLVDGFCKVGRM 443

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+ +  +M      PNVVTY +LI  FC A     A  L  EM+  GVQPNV+++  +
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503

Query: 137 MNELCKNGKMDEASRLLE-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +   C  G ++EA ++LE L      + + F Y  +MDG C TGR++ A EL  +++  G
Sbjct: 504 IGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 563

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQVERA 254
                  Y  LI G C+ KE+  A+ +  EM LS+  +P+   Y  +   L    + E A
Sbjct: 564 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 623

Query: 255 FKLFDEM 261
             L DE+
Sbjct: 624 NALADEL 630



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 101/208 (48%), Gaps = 35/208 (16%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           M C+ NV +++I+I+G CK   +  A + +++M  KG  P+   YN L  G  ++H+V R
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 254 AFKLFDEMQRHGVAADTWAYRTFI-----------------------------------D 278
           A+ L  EM+  G+A +   Y T I                                    
Sbjct: 61  AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLS 120

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GLC+NG + EA EL   +R    + D  +Y+ L+ GLCK+G++ +A ++F     G    
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           DVV Y+ +I  LC  G++D+A  LF  M
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKM 208



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 8/189 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++   GC+PNV TY  LI+  CR G   VA  L EEM  GNG      +PN 
Sbjct: 444 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMV-GNG-----VQPNV 497

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +TY ++I G C  G +++A+++  ++ +DEN   ++  Y  ++ G C     + A  L  
Sbjct: 498 ITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 557

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM-IQIGVRPNAFVYNTLMDGFCLT 178
            +   G  P    +  ++  LC+  ++ +A  +LE M +    RPNA  Y  ++      
Sbjct: 558 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 617

Query: 179 GRVNRAEEL 187
           GR   A  L
Sbjct: 618 GRHEEANAL 626



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/69 (28%), Positives = 38/69 (55%)

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           ++ E ++  +  +IDGLCK+ RL  A   F  + +   + +  TYN++I+  C   K+ +
Sbjct: 1   MECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHR 60

Query: 359 ARDLFLDME 367
           A  L  +M+
Sbjct: 61  AYLLLKEMK 69


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  254 bits (650), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/365 (36%), Positives = 212/365 (58%), Gaps = 9/365 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+  FG EP+V T ++LING C+      A++L  +M     E G   +P+ V 
Sbjct: 64  ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME----EMGF--RPDVVI 117

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIIDG CK G V+ A ELF +M+ + +  + VTYNSL+ G C +  W++A  L  +M+
Sbjct: 118 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 177

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV++F  +++   K GK  EA +L E M +  V P+ F YN+L++G C+ GRV+
Sbjct: 178 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 237

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+++   M + GC  +V +Y+ LING+CK+K ++    L+ EM  +G+  D + YNT+ 
Sbjct: 238 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 297

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+  + + A ++F  M       +   Y   + GLC N  + +A+ LF  ++  + E
Sbjct: 298 QGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 354

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LDI  YN +I G+CK G ++ AW+LFRSL    L  DVV+Y  MI   C   + DK+  L
Sbjct: 355 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 414

Query: 363 FLDME 367
           +  M+
Sbjct: 415 YRKMQ 419



 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 202/365 (55%), Gaps = 9/365 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF  + V G   ++++YN +IN LCR    ++AL++  +M     +FG   +P+ VT +
Sbjct: 31  SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVS 84

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++I+G C+   V  A +L  KM++    P+VV YN++I G C     N+A  LF  M   
Sbjct: 85  SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 144

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+ + V++N ++  LC +G+  +A+RL+  M+   + PN   +  ++D F   G+ + A
Sbjct: 145 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 204

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +L+  M       +VF+Y+ LING C +  ++ A  +   M++KG  PDVV YNTL  G
Sbjct: 205 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 264

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  +V+   KLF EM + G+  DT  Y T I G  + G    A E+F  +       +
Sbjct: 265 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPN 321

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           IR Y+ L+ GLC + R++ A  LF ++ +  +  D+ TYNI+IH +C  G ++ A DLF 
Sbjct: 322 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 381

Query: 365 DMEAK 369
            +  K
Sbjct: 382 SLSCK 386



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 167/312 (53%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V ++ ++  + K    D    LF  M+   I  ++ +YN +I+  C  + +  A  +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P+VV+ + ++N  C+  ++ +A  L+  M ++G RP+  +YNT++DG C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G VN A ELF  ME  G + +  +Y+ L+ G C +     A  L  +M+ + I P+V+ 
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  +     +  +   A KL++EM R  V  D + Y + I+GLC +G + EA ++   + 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN LI+G CKS R+    +LFR + +  L+ D +TYN +I      G+ D
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 358 KARDLFLDMEAK 369
            A+++F  M+++
Sbjct: 308 AAQEIFSRMDSR 319



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 44/300 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G   +  TYN+L+ GLC +G    A  L  +M   +        PN +
Sbjct: 133 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD------IVPNVI 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +ID   KEG   +A +L+ +M    ++P+V TYNSLI+G C     +EAK +   M
Sbjct: 187 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VV++N ++N  CK+ ++DE ++L   M Q G+  +   YNT++ G+   GR 
Sbjct: 247 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 306

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------------- 228
           + A+E+F  M+S   + N+ +YSIL+ G C N  +E AL L+  M               
Sbjct: 307 DAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 363

Query: 229 ----------------------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                 KG+KPDVV Y T+  G     Q +++  L+ +MQ  G+
Sbjct: 364 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 423



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 128/232 (55%), Gaps = 9/232 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++     +P+VFTYN+LINGLC  G    A  + + M          C P+ V
Sbjct: 203 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG------CLPDVV 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+G CK   VD+  +LF +M    +  + +TYN++I G+  A   + A+ +F  M
Sbjct: 257 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +PN+ ++++++  LC N ++++A  L E M +  +  +   YN ++ G C  G V
Sbjct: 317 ---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 373

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             A +LF S+   G K +V SY+ +I+G+C+ ++ + +  LY +M   G+ P
Sbjct: 374 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 113/243 (46%), Gaps = 35/243 (14%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI---------- 205
           MIQ    P+   ++ ++     +   +    LF  ME  G  H+++SY+I          
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 206 -------------------------LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
                                    LING+C+   +  A+ L S+M   G +PDVVIYNT
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G  +I  V  A +LFD M+R GV AD   Y + + GLC +G   +A  L R + +  
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  +  +ID   K G+   A +L+  + R  +  DV TYN +I+ LC  G++D+A+
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 361 DLF 363
            + 
Sbjct: 241 QML 243


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 134/365 (36%), Positives = 212/365 (58%), Gaps = 9/365 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+  FG EP+V T ++LING C+      A++L  +M     E G   +P+ V 
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME----EMGF--RPDVVI 176

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIIDG CK G V+ A ELF +M+ + +  + VTYNSL+ G C +  W++A  L  +M+
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV++F  +++   K GK  EA +L E M +  V P+ F YN+L++G C+ GRV+
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+++   M + GC  +V +Y+ LING+CK+K ++    L+ EM  +G+  D + YNT+ 
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+  + + A ++F  M       +   Y   + GLC N  + +A+ LF  ++  + E
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LDI  YN +I G+CK G ++ AW+LFRSL    L  DVV+Y  MI   C   + DK+  L
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473

Query: 363 FLDME 367
           +  M+
Sbjct: 474 YRKMQ 478



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 202/365 (55%), Gaps = 9/365 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF  + V G   ++++YN +IN LCR    ++AL++  +M     +FG   +P+ VT +
Sbjct: 90  SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVS 143

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++I+G C+   V  A +L  KM++    P+VV YN++I G C     N+A  LF  M   
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+ + V++N ++  LC +G+  +A+RL+  M+   + PN   +  ++D F   G+ + A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +L+  M       +VF+Y+ LING C +  ++ A  +   M++KG  PDVV YNTL  G
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  +V+   KLF EM + G+  DT  Y T I G  + G    A E+F  +       +
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPN 380

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           IR Y+ L+ GLC + R++ A  LF ++ +  +  D+ TYNI+IH +C  G ++ A DLF 
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440

Query: 365 DMEAK 369
            +  K
Sbjct: 441 SLSCK 445



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 167/312 (53%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V ++ ++  + K    D    LF  M+   I  ++ +YN +I+  C  + +  A  +
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P+VV+ + ++N  C+  ++ +A  L+  M ++G RP+  +YNT++DG C 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G VN A ELF  ME  G + +  +Y+ L+ G C +     A  L  +M+ + I P+V+ 
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  +     +  +   A KL++EM R  V  D + Y + I+GLC +G + EA ++   + 
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN LI+G CKS R+    +LFR + +  L+ D +TYN +I      G+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366

Query: 358 KARDLFLDMEAK 369
            A+++F  M+++
Sbjct: 367 AAQEIFSRMDSR 378



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 44/300 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G   +  TYN+L+ GLC +G    A  L  +M   +        PN +
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD------IVPNVI 245

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +ID   KEG   +A +L+ +M    ++P+V TYNSLI+G C     +EAK +   M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VV++N ++N  CK+ ++DE ++L   M Q G+  +   YNT++ G+   GR 
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------------- 228
           + A+E+F  M+S   + N+ +YSIL+ G C N  +E AL L+  M               
Sbjct: 366 DAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422

Query: 229 ----------------------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                 KG+KPDVV Y T+  G     Q +++  L+ +MQ  G+
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 147/289 (50%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +LF KM      P++V ++ ++     + +++    LF  M   G+  ++ S+N+++N L
Sbjct: 55  DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+  +   A  ++  M++ G  P+    ++L++GFC   RV  A +L   ME MG + +V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
             Y+ +I+G CK   +  A+ L+  M   G++ D V YN+L  GL    +   A +L  +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M    +  +   +   ID   K G   EA++L+  +     + D+  YN LI+GLC  GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  A ++   +     + DVVTYN +I+  C   ++D+   LF +M  +
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 143/283 (50%), Gaps = 5/283 (1%)

Query: 92  NPNVVTYNSLIHGFCYAN-----DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           NP +V + S   G  ++      +  E   LF +M+     P++V F+ +++++ K+   
Sbjct: 26  NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D    L   M   G+  + + YN +++  C   R   A  +   M   G + +V + S L
Sbjct: 86  DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+C+   +  A+ L S+M   G +PDVVIYNT+  G  +I  V  A +LFD M+R GV
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
            AD   Y + + GLC +G   +A  L R + +     ++  +  +ID   K G+   A +
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+  + R  +  DV TYN +I+ LC  G++D+A+ +   M  K
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/232 (31%), Positives = 128/232 (55%), Gaps = 9/232 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++     +P+VFTYN+LINGLC  G    A  + + M          C P+ V
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG------CLPDVV 315

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+G CK   VD+  +LF +M    +  + +TYN++I G+  A   + A+ +F  M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +PN+ ++++++  LC N ++++A  L E M +  +  +   YN ++ G C  G V
Sbjct: 376 ---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             A +LF S+   G K +V SY+ +I+G+C+ ++ + +  LY +M   G+ P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 208/366 (56%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+   G   +  +Y  LING+C+ G T  A+ L   +   +       +PN V
Sbjct: 146 EALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWS------IRPNVV 199

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ IID LCK+  VD+A +L+ +M  + I+P+VVTY+ L+ GFC     N A  L  EM
Sbjct: 200 IYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEM 259

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P++ ++ ++++ LCK GK+ EA  +L +M++  V  +  VY+TLMDG+CL   V
Sbjct: 260 VLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEV 319

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A+ +F +M  MG   +V  YSI+ING CK K ++ AL+L+ E+  K + PD V Y +L
Sbjct: 320 NNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSL 379

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  ++   + LFDEM   G   D   Y   ID LCKNG++  A+ LF  ++    
Sbjct: 380 IDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAI 439

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  +  L+DGLCK GRLK A E F+ L       +V TY +MI+ LC +G +D+A  
Sbjct: 440 RPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALA 499

Query: 362 LFLDME 367
           L   ME
Sbjct: 500 LQSRME 505



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 200/367 (54%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L+ ++ +   EP+ FT N +IN  C  G  ++A +   ++     + G   +PNT+T
Sbjct: 77  AISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL----KLGY--QPNTIT 130

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T++ GLC EG V +A     K+  +    + ++Y  LI+G C   +   A  L   + 
Sbjct: 131 LNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIE 190

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              ++PNVV +++I++ LCK+  +DEA  L   M+  G+ P+   Y+ L+ GFC+ G++N
Sbjct: 191 RWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLN 250

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           RA +L   M       ++++Y+IL++  CK  +++ A ++ + M+   +  DVV+Y+TL 
Sbjct: 251 RAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLM 310

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   +++V  A ++F  M + GV  D   Y   I+GLCK   + EA+ LF  +      
Sbjct: 311 DGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMV 370

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y  LID LCKSGR+   W+LF  +       DV+TYN +I ALC +G +D+A  L
Sbjct: 371 PDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIAL 430

Query: 363 FLDMEAK 369
           F  M+ +
Sbjct: 431 FNKMKDQ 437



 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 190/367 (51%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++  +   PNV  Y+ +I+ LC+      A +L+ EM  G G       P+ VT
Sbjct: 182 AIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMV-GKG-----ISPDVVT 235

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ ++ G C  G +++A +L  +M  ENINP++ TY  L+   C      EA+ +   M+
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V  +VV ++ +M+  C   +++ A R+   M Q+GV P+   Y+ +++G C   RV+
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  +       +  +Y+ LI+  CK+  I     L+ EML +G  PDV+ YN L 
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLI 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +   ++RA  LF++M+   +  + + +   +DGLCK G +  A+E F+ L    Y 
Sbjct: 416 DALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYC 475

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           L++R Y  +I+GLCK G L  A  L   +     I+D VT+ IMI A     + DKA  L
Sbjct: 476 LNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKL 535

Query: 363 FLDMEAK 369
             +M A+
Sbjct: 536 VREMIAR 542



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 180/367 (49%), Gaps = 3/367 (0%)

Query: 6   LFMKLRVFGC-EPNVFTYNTLINGLCRTGHTIVAL--NLFEEMANGNGEFGVVCKPNTVT 62
           +FM  R+  C   ++  +   +  LC   H++  L  N  + ++  N  F V   P+T  
Sbjct: 1   MFMSRRLRYCLSLSIPNFPPFLPNLCFHSHSLPPLTHNADDAVSQFNHMFHVHPTPHTFH 60

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  I+  L        A  L+ +M+   + P+  T N +I+ FC+      A     +++
Sbjct: 61  FNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKIL 120

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G QPN ++ N +M  LC  GK+ EA R  + ++  G R +   Y  L++G C  G   
Sbjct: 121 KLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETR 180

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   +E    + NV  YS++I+  CK+  ++ A  LY+EM+ KGI PDVV Y+ L 
Sbjct: 181 AAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILV 240

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + Q+ RA  L +EM    +  D + Y   +D LCK G + EA  +   +      
Sbjct: 241 SGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVN 300

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LD+  Y+ L+DG C    +  A  +F ++ +  +  DV  Y+IMI+ LC   ++D+A +L
Sbjct: 301 LDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNL 360

Query: 363 FLDMEAK 369
           F ++  K
Sbjct: 361 FEEIHQK 367



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 135/249 (54%), Gaps = 6/249 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V  Y+TL++G C       A  +F  M     + GV   P+   Y+ +I+GLCK   VD
Sbjct: 302 DVVVYSTLMDGYCLVNEVNNAKRVFYTMT----QMGVT--PDVHCYSIMINGLCKIKRVD 355

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  LF ++  +N+ P+ VTY SLI   C +   +    LF EM+D+G  P+V+++N ++
Sbjct: 356 EALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLI 415

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + LCKNG +D A  L   M    +RPN + +  L+DG C  GR+  A E F  + + G  
Sbjct: 416 DALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYC 475

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +Y+++ING CK   ++ AL+L S M   G   D V +  +    F+  + ++A KL
Sbjct: 476 LNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKL 535

Query: 258 FDEMQRHGV 266
             EM   G+
Sbjct: 536 VREMIARGL 544


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 137/354 (38%), Positives = 211/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ +T+N LI      G    A+ +F EM     + GV  KP+ VTY T+I  LC+ 
Sbjct: 402 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR----DHGV--KPDVVTYRTVIAALCRI 455

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F +M D+ + P+   YN LI GFC      +AK L  E+M+ G+  ++V F
Sbjct: 456 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 515

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I+N LCK G++ +A  + +L + +G+ P+A VY+ LMDG+CL G++ +A  +F +M S
Sbjct: 516 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 575

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV  Y  L+NGYCK   I+  LSL+ EML +GIKP  ++Y+ +  GLF+  +   
Sbjct: 576 AGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVP 635

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   F EM   G+A D   Y   + GL KN    EA+ LF+ LR +  +++I   N +ID
Sbjct: 636 AKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 695

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+ ++ R++ A +LF S+ R  L+ +VVTY+IMI  L  +G +++A D+F  M+
Sbjct: 696 GMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQ 749



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 197/386 (51%), Gaps = 39/386 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P+VF+Y+ L+  LC  G +  A +L   MA G    G VC PN V Y T+IDG  K
Sbjct: 189 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFK 244

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN----------------------- 109
           EG V+KA +LF +M    I P++VTYNS++H  C A                        
Sbjct: 245 EGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 304

Query: 110 ------------DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
                        W EA  +F EM    + P+VV+ +++M  LCK GK+ EA  + + M 
Sbjct: 305 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 364

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  P+ F YN +++G+   G +    +LF  M   G   + +++++LI  Y     ++
Sbjct: 365 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 424

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ +++EM   G+KPDVV Y T+   L  I +++ A + F++M   GVA D +AY   I
Sbjct: 425 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 484

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            G C +G +++A EL   +      LDI  ++ +I+ LCK GR+  A  +F       L 
Sbjct: 485 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 544

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
            D V Y++++   C  GKM+KA  +F
Sbjct: 545 PDAVVYSMLMDGYCLVGKMEKALRVF 570



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++R     P+V T + L+  LC+ G    A ++F+ MA   G+      P+  
Sbjct: 320 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVF 373

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +++G   +G +    +LF  M  + I P+  T+N LI  +      ++A  +F EM
Sbjct: 374 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV+P+VV++  ++  LC+ GKMD+A      MI  GV P+ + YN L+ GFC  G +
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 493

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   + + G   ++  +S +IN  CK   +  A +++   ++ G+ PD V+Y+ L
Sbjct: 494 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 553

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E+A ++FD M   G+  +   Y T ++G CK G I E + LFR +     
Sbjct: 554 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 613

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     Y+ +IDGL ++GR   A   F  +    +  D+ TYNI++  L  +   D+A  
Sbjct: 614 KPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 673

Query: 362 LFLDMEA 368
           LF ++ A
Sbjct: 674 LFKELRA 680



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN +TYN LI G   TG    A+ +F+EM   +        P+ VT + ++  LCK G +
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLSMLMGSLCKYGKI 353

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+++F  M  +  NP+V +YN +++G+       +   LF  M+  G+ P+  +FNV+
Sbjct: 354 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 413

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +      G +D+A  +   M   GV+P+   Y T++   C  G+++ A E F  M   G 
Sbjct: 414 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 473

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             + ++Y+ LI G+C +  +  A  L SE+++ G+  D+V ++++   L ++ +V  A  
Sbjct: 474 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 533

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +FD     G+  D   Y   +DG C  G + +A+ +F  +     E ++  Y  L++G C
Sbjct: 534 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 593

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K GR+     LFR + +  +    + Y+I+I  L   G+   A+  F +M
Sbjct: 594 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEM 643



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
           +  CR+G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++
Sbjct: 93  SAACRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQL 150

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGK 145
               +  N++  N L+ GFC A   +EA  + +    + G  P+V S+++++  LC  GK
Sbjct: 151 LRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK 210

Query: 146 MDEASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
             +A  LL +M + G    PN   YNT++DGF   G VN+A +LF  M   G   ++ +Y
Sbjct: 211 SGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 270

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + +++  CK + ++ A +   +M++K + P+   YN L  G     Q + A ++F EM+R
Sbjct: 271 NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 330

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
           H +  D       +  LCK G I EA ++F T+ +     D+ +YN +++G    G L  
Sbjct: 331 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 390

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             +LF  +    +  D  T+N++I A    G +DKA  +F +M 
Sbjct: 391 MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 434



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 159/308 (51%), Gaps = 6/308 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + YN LI G C  G  + A  L  E+ N      +V       +++II+ LCK 
Sbjct: 472 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV------FFSSIINNLCKL 525

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +F    +  ++P+ V Y+ L+ G+C      +A  +F  M+  G++PNVV +
Sbjct: 526 GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 585

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N  CK G++DE   L   M+Q G++P+  +Y+ ++DG    GR   A+  F  M  
Sbjct: 586 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTE 645

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ +Y+I++ G  KN+  + A+ L+ E+ +  +K +++  NT+  G+F+  +VE 
Sbjct: 646 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 705

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF  + R  +  +   Y   I  L K G + EA ++F +++    E + R  N ++ 
Sbjct: 706 AKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 765

Query: 314 GLCKSGRL 321
            L K   +
Sbjct: 766 ELLKKNEI 773



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 6/293 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +F      G  P+   Y+ L++G C  G    AL +F+ M +   E      PN 
Sbjct: 529 MDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE------PNV 582

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T+++G CK G +D+   LF +M    I P+ + Y+ +I G   A     AK  F E
Sbjct: 583 VVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHE 642

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G+  ++ ++N+++  L KN   DEA  L + +  + V+ N    NT++DG   T R
Sbjct: 643 MTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRR 702

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A++LF S+       NV +YSI+I    K   +E A  ++S M + G +P+  + N 
Sbjct: 703 VEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNH 762

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +   L + +++ RA     ++     + +       +D     G   E +   
Sbjct: 763 VVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQIRFL 815



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 157/332 (47%), Gaps = 9/332 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++   G   ++  ++++IN LC+ G  + A N+F+   N      V   P+ 
Sbjct: 494 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 547

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ ++DG C  G ++KA  +F  M    I PNVV Y +L++G+C     +E   LF E
Sbjct: 548 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 607

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +++I++ L + G+   A      M + G+  +   YN ++ G      
Sbjct: 608 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRC 667

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A  LF  + +M  K N+ + + +I+G  + + +E A  L++ +    + P+VV Y+ 
Sbjct: 668 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSI 727

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L +   VE A  +F  MQ  G   ++      +  L K   IV A      +    
Sbjct: 728 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 787

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + L+      L+D     G  +   E  R LP
Sbjct: 788 FSLEHLTAMLLVDLFSSKGTCR---EQIRFLP 816



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R N  + N L++GFC   R + A 
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSYSIL+   C   +   A  L   M   G    P+VV YNT+ 
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +   +  
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G   +G+ K A  +F+ + R  ++ DVVT ++++ +LC  GK+ +ARD+
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 360 FDTMAMK 366


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 131/354 (37%), Positives = 205/354 (57%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +N   +   + G    A+++F +M     + G+   PN V Y  +ID LCK 
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMR----QHGL--SPNVVNYGALIDALCKL 422

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A+  F +M +E + PN+V +NSL++G C  + W  A+ L  EM+DQG+ PN V F
Sbjct: 423 GRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFF 482

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LC  G++ E  RL++LM  +GVRP+AF Y  L+ G+CLTGR + AE++F  M S
Sbjct: 483 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G      +Y+ L++GYC    I+ A  L+ EML KG+ P VV YNT+  GLF+  +   
Sbjct: 543 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M   G   D + Y   ++GLCK+  + EA ++F++L     +L+I  +  +I 
Sbjct: 603 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 662

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR + A +LF ++P   L+ +VVTY ++   L  +G +++   LF  ME
Sbjct: 663 ALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAME 716



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  +   G +P V TY  LI+G    G  +  ++ F ++   NG       P+  
Sbjct: 322 EARFFFDSMIRKGIKPKVSTYGILIHGYATKG-ALSEMHSFLDLMVENG-----LSPDHH 375

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +        K G +DKA ++F KM+   ++PNVV Y +LI   C     ++A+  F +M
Sbjct: 376 IFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQM 435

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++GV PN+V FN ++  LC   K + A  L+  M+  G+ PNA  +NTL+   C  GRV
Sbjct: 436 INEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 495

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                L   ME +G + + FSY+ LI+GYC     + A  ++  M+S G+ P  V YNTL
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTL 555

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A+ LF EM R GV      Y T + GL +     EA EL+  +     
Sbjct: 556 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 615

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  YN +++GLCKS  +  A+++F+SL    L  +++T+ IMI AL   G+ + A D
Sbjct: 616 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMD 675

Query: 362 LFLDMEA 368
           LF  + A
Sbjct: 676 LFAAIPA 682



 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 188/390 (48%), Gaps = 41/390 (10%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PNV +Y+ +ING    G      NLF EM +          P+ VTYTT+IDGLCK  
Sbjct: 195 CPPNVVSYSIVINGFFTEGQVDKPYNLFLEMIDRG------IPPDVVTYTTVIDGLCKAQ 248

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
             D+A+ +F +M D    PN  TYN LIHG+     W E   +  EM  +G++P+  ++ 
Sbjct: 249 LFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYG 308

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR-------------- 180
            ++N LCKNG+  EA    + MI+ G++P    Y  L+ G+   G               
Sbjct: 309 SLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVEN 368

Query: 181 ---------------------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
                                +++A ++F  M   G   NV +Y  LI+  CK   ++ A
Sbjct: 369 GLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDA 428

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
              +++M+++G+ P++V++N+L  GL  + + ERA +L  EM   G+  +   + T I  
Sbjct: 429 EVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 488

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           LC  G ++E   L   +  +    D  +Y  LI G C +GR   A ++F  +    L   
Sbjct: 489 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPT 548

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            VTYN ++H  C+  ++D A  LF +M  K
Sbjct: 549 EVTYNTLLHGYCSASRIDDAYCLFREMLRK 578



 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 187/362 (51%), Gaps = 3/362 (0%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+  +Y  L+ GLC       AL L   MA+ +G     C PN V+Y+ 
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGR---RCPPNVVSYSI 204

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G   EG VDK   LFL+M D  I P+VVTY ++I G C A  ++ A+ +F +M+D G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +PN  ++N +++     GK  E  ++LE M   G++P+ + Y +L++  C  GR   A 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F SM   G K  V +Y ILI+GY     +    S    M+  G+ PD  I+N  F   
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   +++A  +F++M++HG++ +   Y   ID LCK G + +A   F  +       +I
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             +N L+ GLC   + + A EL   +    +  + V +N +I  LC  G++ + R L   
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 504

Query: 366 ME 367
           ME
Sbjct: 505 ME 506



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   G +PN +TYN LI+G    G     + + EEM+          KP+  
Sbjct: 252 RAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARG------LKPDCY 305

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++++ LCK G   +A+  F  M  + I P V TY  LIHG+      +E       M
Sbjct: 306 TYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLM 365

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+ P+   FN+  +   K G +D+A  +   M Q G+ PN   Y  L+D  C  GRV
Sbjct: 366 VENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRV 425

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + AE  F  M + G   N+  ++ L+ G C   + E A  L  EML +GI P+ V +NTL
Sbjct: 426 DDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTL 485

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L  + +V    +L D M+  GV  D ++Y   I G C  G   EA ++F  +  +  
Sbjct: 486 ICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGL 545

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 YN L+ G C + R+  A+ LFR + R  +   VVTYN ++H L    +  +A++
Sbjct: 546 SPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 605

Query: 362 LFLDM 366
           L+L+M
Sbjct: 606 LYLNM 610



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 186/383 (48%), Gaps = 33/383 (8%)

Query: 17  PNVFTYNTLINGLCRTGH------------------TIVALN-LFEEMANGN--GEFGVV 55
           PN+ TY+ LI   CR GH                    +A+N L + + +G   GE   V
Sbjct: 88  PNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDV 147

Query: 56  ---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN---INPNVVTYNSLIH 103
                    C P+TV+YT ++ GLC E   ++A EL   M D++     PNVV+Y+ +I+
Sbjct: 148 LLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVIN 207

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           GF      ++   LF+EM+D+G+ P+VV++  +++ LCK    D A  + + MI  G +P
Sbjct: 208 GFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKP 267

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N + YN L+ G+   G+     ++   M + G K + ++Y  L+N  CKN     A   +
Sbjct: 268 NNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFF 327

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M+ KGIKP V  Y  L  G      +       D M  +G++ D   +  F     K 
Sbjct: 328 DSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKC 387

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G I +A+++F  +R      ++  Y  LID LCK GR+  A   F  +    +  ++V +
Sbjct: 388 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 447

Query: 344 NIMIHALCADGKMDKARDLFLDM 366
           N +++ LC   K ++A +L  +M
Sbjct: 448 NSLVYGLCTVDKWERAEELVYEM 470



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 135/283 (47%), Gaps = 5/283 (1%)

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
            + + PN+ TY+ LI  FC           F  ++  G + + ++ N ++  LC   ++ 
Sbjct: 83  SDKVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVG 142

Query: 148 EA-SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM---ESMGCKHNVFSY 203
           EA   LL+ M ++G  P+   Y  L+ G C   R   A EL   M       C  NV SY
Sbjct: 143 EAMDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSY 202

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           SI+ING+    +++   +L+ EM+ +GI PDVV Y T+  GL +    +RA  +F +M  
Sbjct: 203 SIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMID 262

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
           +G   + + Y   I G    G   E V++   +     + D   Y  L++ LCK+GR + 
Sbjct: 263 NGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCRE 322

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A   F S+ R  +   V TY I+IH     G + +    FLD+
Sbjct: 323 ARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHS-FLDL 364



 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME   L   +   G  P+ F+Y  LI+G C TG T  A  +F+ M +      +   P  
Sbjct: 496 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVS------IGLSPTE 549

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ G C    +D A  LF +M  + + P VVTYN+++HG      ++EAK L++ 
Sbjct: 550 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 609

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G + ++ ++N+I+N LCK+  +DEA ++ + +   G++ N   +  ++      GR
Sbjct: 610 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 669

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   NV +Y ++     +   +E   SL+S M   G  P+  + N 
Sbjct: 670 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 729

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 730 LVRRLLHRGDISRA 743



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 120/248 (48%), Gaps = 4/248 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN+ ++++++   C+ G ++       L+++ G R +    N L+ G C   RV  A 
Sbjct: 86  VAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAM 145

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPDVVIYNTL 241
           ++ +  M  +GC  +  SY+IL+ G C  K  E AL L   M     +   P+VV Y+ +
Sbjct: 146 DVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIV 205

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F   QV++ + LF EM   G+  D   Y T IDGLCK      A  +F+ +    +
Sbjct: 206 INGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGF 265

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +   YNCLI G    G+ K   ++   +    L  D  TY  +++ LC +G+  +AR 
Sbjct: 266 KPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARF 325

Query: 362 LFLDMEAK 369
            F  M  K
Sbjct: 326 FFDSMIRK 333



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 109/228 (47%), Gaps = 10/228 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G  P   TYNTL++G C       A  LF EM       GV   P  V
Sbjct: 532 EAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRK----GVT--PGVV 585

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TI+ GL +     +AKEL+L M +     ++ TYN +++G C +N  +EA  +F  +
Sbjct: 586 TYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSL 645

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+Q N+++F +++  L K G+ ++A  L   +   G+ PN   Y  + +     G +
Sbjct: 646 CSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSL 705

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
              + LF +ME  G   N    S ++N   +     G +S     LSK
Sbjct: 706 EEFDSLFSAMEKNGTAPN----SQMLNALVRRLLHRGDISRAGAYLSK 749



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 105/221 (47%), Gaps = 6/221 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P V TYNT+++GL +T     A  L+  M N     G  C  +  
Sbjct: 567 DAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINS----GTKC--DIY 620

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I++GLCK   VD+A ++F  +  + +  N++T+  +I          +A  LF  +
Sbjct: 621 TYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAI 680

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVV++ ++   L + G ++E   L   M + G  PN+ + N L+      G +
Sbjct: 681 PANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDI 740

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           +RA      ++         + S+L++ +  ++    A SL
Sbjct: 741 SRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSL 781



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 8/154 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +F  L   G + N+ T+  +I  L + G    A++LF  + ANG         PN 
Sbjct: 637 EAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG-------LVPNV 689

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  + + L +EG +++   LF  M+     PN    N+L+    +  D + A     +
Sbjct: 690 VTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSK 749

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           + ++       + +++M+    +     A  L E
Sbjct: 750 LDERNFSVEASTTSLLMSIFTSDEYQHHAKSLPE 783


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  254 bits (648), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 134/346 (38%), Positives = 201/346 (58%), Gaps = 6/346 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G + N  +Y TLINGLC+ G T  AL +   +       G + + + V Y TIID
Sbjct: 164 KVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRID------GKLVRLDVVMYNTIID 217

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G+CK+  V+ A + + +M  + I P VVTYN+LI G C      +A  L  +M+ + + P
Sbjct: 218 GVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINP 277

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
            V +F+++++  CK GK+ EA  +  +M++  V+PN   YN+LM+G+CL   VN+AE +F
Sbjct: 278 TVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIF 337

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            +M  +G   +V SYSI+I+G+CK K ++ A+ L+ EM  K I PDVV YN+L  GL + 
Sbjct: 338 NTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKS 397

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A KL  EM   G   +   Y + +D LCKN ++ +A+EL   L+    +  +  Y
Sbjct: 398 GRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTY 457

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           N LI+GLCKSGRLK A ++F  +       DV TYN MI   C  G
Sbjct: 458 NILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 159/272 (58%), Gaps = 6/272 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P V TYNTLI GLC  G    A+ L  +M   N        P   T++ ++D  CKEG V
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILEN------INPTVYTFSILVDAFCKEGKV 295

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +AK +F+ M  +++ PN+VTYNSL++G+C  N+ N+A+ +F  M   GV P+V S++++
Sbjct: 296 KEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIM 355

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK   +DEA +L E M    + P+   YN+L+DG C +GR++ A +L   M   G 
Sbjct: 356 ISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQ 415

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N+ +Y+ L++  CKN  ++ A+ L +++    I+P V  YN L  GL +  +++ A K
Sbjct: 416 PPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQK 475

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +F+++  +G   D + Y T I G CK G+++ 
Sbjct: 476 VFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIP 507



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
             +L  ++   G   N+ T + LIN   + GH  ++ ++F  +     E      P+ +T
Sbjct: 88  VVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYE------PDAIT 141

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            TT+I GLC +G + KA     K+       N V+Y +LI+G C       A  +   + 
Sbjct: 142 LTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRID 201

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V+ +VV +N I++ +CK+  +++A      M+   + P    YNTL+ G C+ G++ 
Sbjct: 202 GKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLK 261

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M        V+++SIL++ +CK  +++ A +++  M+ K +KP++V YN+L 
Sbjct: 262 DAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLM 321

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   +++V +A  +F+ M + GVA D  +Y   I G CK   + EA++LF  +   +  
Sbjct: 322 NGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIF 381

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  YN LIDGLCKSGR+  A +L   +       +++TYN ++ ALC +  +DKA +L
Sbjct: 382 PDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIEL 441

Query: 363 FLDME 367
              ++
Sbjct: 442 LTKLK 446



 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/312 (27%), Positives = 154/312 (49%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ + +  I+  L K         L  +M+   I  N+VT + LI+ F      + +  +
Sbjct: 67  PSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSV 126

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G +P+ ++   ++  LC  G + +A    + ++ +G + N   Y TL++G C 
Sbjct: 127 FSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCK 186

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+   A E+   ++    + +V  Y+ +I+G CK+K +  A   YSEM++K I P VV 
Sbjct: 187 VGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVT 246

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNTL  GL  + Q++ A  L  +M    +    + +   +D  CK G + EA  +F  + 
Sbjct: 247 YNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMM 306

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +I  YN L++G C    +  A  +F ++ +  +  DV +Y+IMI   C    +D
Sbjct: 307 KKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVD 366

Query: 358 KARDLFLDMEAK 369
           +A  LF +M  K
Sbjct: 367 EAMKLFEEMHCK 378



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 135/244 (55%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K+ +    P V+T++ L++  C+ G    A N+F  M   +       KPN V
Sbjct: 262 DAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKD------VKPNIV 315

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++++G C    V+KA+ +F  M    + P+V +Y+ +I GFC     +EA  LF EM
Sbjct: 316 TYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEM 375

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+VV++N +++ LCK+G++  A +L+  M   G  PN   YN+L+D  C    V
Sbjct: 376 HCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHV 435

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A EL   ++    + +V +Y+ILING CK+  ++ A  ++ ++L  G   DV  YNT+
Sbjct: 436 DKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTM 495

Query: 242 FIGL 245
             G 
Sbjct: 496 IKGF 499



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 6/211 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F+ +     +PN+ TYN+L+NG C       A ++F  MA    + GV   P+  
Sbjct: 297 EAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMA----QIGVA--PDVH 350

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ +I G CK   VD+A +LF +M  + I P+VVTYNSLI G C +   + A  L  EM
Sbjct: 351 SYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEM 410

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  PN++++N +++ LCKN  +D+A  LL  +    ++P+   YN L++G C +GR+
Sbjct: 411 HDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRL 470

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK 212
             A+++F  +   G   +V++Y+ +I G+CK
Sbjct: 471 KDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 141/281 (50%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           +  +N  P+++ +  ++     AN ++    L  +M   G+  N+V+ ++++N   + G 
Sbjct: 60  LHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFSQLGH 119

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
              +  +   +++ G  P+A    TL+ G CL G +++A      + ++G + N  SY  
Sbjct: 120 NSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRT 179

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING CK  + + AL +   +  K ++ DVV+YNT+  G+ +   V  AF  + EM    
Sbjct: 180 LINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKR 239

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +      Y T I GLC  G + +A+ L   + +      +  ++ L+D  CK G++K A 
Sbjct: 240 ICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAK 299

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +F  + +  +  ++VTYN +++  C   +++KA  +F  M
Sbjct: 300 NVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTM 340



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 85/143 (59%), Gaps = 6/143 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++      P+V TYN+LI+GLC++G    AL L  EM +  G+      PN +
Sbjct: 367 EAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHD-RGQ-----PPNII 420

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++D LCK   VDKA EL  K+KD NI P+V TYN LI+G C +    +A+ +F ++
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDV 480

Query: 122 MDQGVQPNVVSFNVIMNELCKNG 144
           +  G   +V ++N ++   CK G
Sbjct: 481 LVNGYNIDVYTYNTMIKGFCKKG 503



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%)

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
            S    L+ Q    P+   +  ++         +    L   ME  G   N+ + SILIN
Sbjct: 53  VSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILIN 112

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            + +      + S++S +L KG +PD +   TL  GL     + +A    D++   G   
Sbjct: 113 CFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQL 172

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           +  +YRT I+GLCK G    A+E+ R +      LD+  YN +IDG+CK   +  A++ +
Sbjct: 173 NQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFY 232

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             +    +   VVTYN +I  LC  G++  A  L   M
Sbjct: 233 SEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKM 270



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 8/76 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNT 60
           +A  L  KL+    +P+V TYN LINGLC++G    A  +FE+ + NG          + 
Sbjct: 437 KAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYN-------IDV 489

Query: 61  VTYTTIIDGLCKEGFV 76
            TY T+I G CK+GFV
Sbjct: 490 YTYNTMIKGFCKKGFV 505


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  254 bits (648), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 211/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +N + N   +      A+++F++M            P  V Y  +ID LCK 
Sbjct: 337 GVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ------WLSPGVVNYGALIDALCKL 390

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F +M +E + P++  ++SL++G C  + W +A+ LF E++DQG++ N   F
Sbjct: 391 GRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFF 450

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++M  LC+ G++ EA RL++LM+++ VRP+   YNTL+DG CLTGR++ A +L   M S
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS 510

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K + F+Y+ L++GYCK + I+ A SL+ EML KG+ P VV YNT+  GLF+I +   
Sbjct: 511 IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCE 570

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M  +    D + Y   ++GLC+N ++ EA ++F++L     +LDI   N +I 
Sbjct: 571 AKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIG 630

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR + A +LF ++    L+ DV TY ++   L  +G +++  +LF  ME
Sbjct: 631 ALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAME 684



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 199/400 (49%), Gaps = 40/400 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTVTYT 64
           L  ++  FGC  NV +YN L+ GLC       AL L   MA+ G+G       PN VTYT
Sbjct: 151 LLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSH----TPNVVTYT 206

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+IDGLCK   VD+AK +F  M D+ + PN  TY  LIHG+     W E   +  EM   
Sbjct: 207 TVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTH 266

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR---- 180
           G+QP+ V + V+++ LCKNG+  EA  + + +I+ G++P+  +Y  L+ G+   G     
Sbjct: 267 GLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEM 326

Query: 181 -------------------------------VNRAEELFVSMESMGCKHNVFSYSILING 209
                                          ++ A  +F  M        V +Y  LI+ 
Sbjct: 327 HSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDA 386

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   ++ A+  +++M+++G+ PD+ ++++L  GL  + + E+A KLF E+   G+  +
Sbjct: 387 LCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLN 446

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              +   +  LC+ G ++EA  L   +  +    D+ +YN L+DG C +GR+  A +L  
Sbjct: 447 AAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLD 506

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +    L  D  TYN ++H  C   ++D A  LF +M  K
Sbjct: 507 VMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMK 546



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  L   G +P+V  Y  L++G    G  +  ++ F ++   NG       P+  
Sbjct: 290 EARNIFDSLIRKGIKPHVTIYGILLHGYATEG-ALSEMHSFLDLMVRNG-----VSPDHH 343

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  + +   K+  +D+A  +F KM+ + ++P VV Y +LI   C     ++A   F +M
Sbjct: 344 IFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQM 403

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++GV P++  F+ ++  LC   K ++A +L   ++  G+R NA  +N LM   C  GRV
Sbjct: 404 INEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRV 463

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ L   M  +  + +V SY+ L++G+C    I+ A  L   M+S G+KPD   YNTL
Sbjct: 464 MEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTL 523

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++ A+ LF EM   G+      Y T + GL + G   EA EL+  +   + 
Sbjct: 524 LHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRR 583

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  Y  +++GLC++  +  A+++F+SL    L  D+ T NIMI AL   G+ + A D
Sbjct: 584 KCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMD 643

Query: 362 LFLDMEA 368
           LF  + A
Sbjct: 644 LFATISA 650



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 189/403 (46%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F  +   G  PN  TY  LI+G   TG     + + +EM+          +P+ V
Sbjct: 220 RAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHG------LQPDCV 273

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------- 106
            Y  ++D LCK G   +A+ +F  +  + I P+V  Y  L+HG+                
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLM 333

Query: 107 ------------------YANDW--NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                             YA     +EA  +F +M  Q + P VV++  +++ LCK G++
Sbjct: 334 VRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRV 393

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A      MI  GV P+ FV+++L+ G C   +  +AE+LF  +   G + N   ++IL
Sbjct: 394 DDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNIL 453

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +   C+   +  A  L   ML   ++PDV+ YNTL  G     +++ A KL D M   G+
Sbjct: 454 MCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGL 513

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D + Y T + G CK   I +A  LFR + +      +  YN ++ GL + GR   A E
Sbjct: 514 KPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKE 573

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+ ++       D+ TY I+++ LC +  +D+A  +F  + +K
Sbjct: 574 LYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSK 616



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 168/359 (46%), Gaps = 19/359 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP-----NTVTYTTIIDGLC 71
           P+  TY  LI   CR G           + +G   FG++ K      NTV +  ++ GLC
Sbjct: 90  PSSCTYTILIGCFCRMG----------RLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLC 139

Query: 72  KEGFVDKAKELFL-KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG---VQ 127
               VD+A ++ L +M +     NV++YN L+ G C      EA  L   M D G     
Sbjct: 140 DAKRVDEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHT 199

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PNVV++  +++ LCK   +D A  + + MI  GVRPN   Y  L+ G+  TG+     ++
Sbjct: 200 PNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQM 259

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M + G + +   Y++L++  CKN     A +++  ++ KGIKP V IY  L  G   
Sbjct: 260 LQEMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYAT 319

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
              +       D M R+GV+ D   +    +   K   I EA+ +F  +R       +  
Sbjct: 320 EGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVN 379

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y  LID LCK GR+  A   F  +    +  D+  ++ +++ LC   K +KA  LF ++
Sbjct: 380 YGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEV 438



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 10/331 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G   N   +N L+  LCR G  + A  L + M        V  +P+ +
Sbjct: 430 KAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLM------LRVDVRPDVI 483

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T++DG C  G +D+A +L   M    + P+  TYN+L+HG+C A   ++A  LF EM
Sbjct: 484 SYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREM 543

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P VV++N I++ L + G+  EA  L   MI    + + + Y  +++G C    V
Sbjct: 544 LMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFV 603

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F S+ S   + ++F+ +I+I    K    E A+ L++ + + G+ PDV  Y  +
Sbjct: 604 DEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLI 663

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   +E   +LF  M+ +G A ++      +  L   G I  A      L    +
Sbjct: 664 AENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKNF 723

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            L+    + LI    ++   ++A    +SLP
Sbjct: 724 SLEASTTSMLISIYSRAEYQQLA----KSLP 750



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L   +      P+V +YNTL++G C TG    A  L + M +      +  KP+ 
Sbjct: 464 MEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS------IGLKPDE 517

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++ G CK   +D A  LF +M  + + P VVTYN+++HG      + EAK L++ 
Sbjct: 518 FTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLN 577

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   + ++ ++ +I+N LC+N  +DEA ++ + +    ++ + F  N ++      GR
Sbjct: 578 MINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGR 637

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   +V +Y ++     K   +E    L+S M   G  P+  + N 
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 698 LVRWLLHRGDIGRA 711


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  253 bits (646), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 137/354 (38%), Positives = 210/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ +T+N LI      G    A+ +F EM     + GV  KP+ VTY T+I  LC+ 
Sbjct: 389 GIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR----DHGV--KPDVVTYRTVIAALCRI 442

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F +M D+ + P+   YN LI GFC      +AK L  E+M+ G+  ++V F
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I+N LCK G++ +A  + +L + +G+ P+A VY+ LMDG+CL G++ +A  +F +M S
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV  Y  L+NGYCK   I+  LSL+ EML +GIKP  ++Y+ +  GLF+  +   
Sbjct: 563 AGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVP 622

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   F EM   G+A D   Y   + GL KN    EA+ LF+ LR +  +++I   N +ID
Sbjct: 623 AKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMID 682

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+ ++ R++ A +LF S+ R  L+  VVTY+IMI  L  +G +++A D+F  M+
Sbjct: 683 GMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 197/386 (51%), Gaps = 39/386 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P+VF+Y+ L+  LC  G +  A +L   MA G    G VC PN V Y T+IDG  K
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPNVVAYNTVIDGFFK 231

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN----------------------- 109
           EG V+KA +LF +M    I P++VTYNS++H  C A                        
Sbjct: 232 EGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWT 291

Query: 110 ------------DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
                        W EA  +F EM    + P+VV+ +++M  LCK GK+ EA  + + M 
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  P+ F YN +++G+   G +    +LF  M   G   + +++++LI  Y     ++
Sbjct: 352 MKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLD 411

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ +++EM   G+KPDVV Y T+   L  I +++ A + F++M   GVA D +AY   I
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLI 471

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            G C +G +++A EL   +      LDI  ++ +I+ LCK GR+  A  +F       L 
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 531

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
            D V Y++++   C  GKM+KA  +F
Sbjct: 532 PDAVVYSMLMDGYCLVGKMEKALRVF 557



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++R     P+V T + L+  LC+ G    A ++F+ MA   G+      P+  
Sbjct: 307 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVF 360

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +++G   +G +    +LF  M  + I P+  T+N LI  +      ++A  +F EM
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV+P+VV++  ++  LC+ GKMD+A      MI  GV P+ + YN L+ GFC  G +
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 480

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   + + G   ++  +S +IN  CK   +  A +++   ++ G+ PD V+Y+ L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 540

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E+A ++FD M   G+  +   Y T ++G CK G I E + LFR +     
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 600

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     Y+ +IDGL ++GR   A   F  +    +  D+ TYNI++  L  +   D+A  
Sbjct: 601 KPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIF 660

Query: 362 LFLDMEA 368
           LF ++ A
Sbjct: 661 LFKELRA 667



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN +TYN LI G   TG    A+ +F+EM   +        P+ VT + ++  LCK G +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVVTLSMLMGSLCKYGKI 340

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+++F  M  +  NP+V +YN +++G+       +   LF  M+  G+ P+  +FNV+
Sbjct: 341 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVL 400

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +      G +D+A  +   M   GV+P+   Y T++   C  G+++ A E F  M   G 
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             + ++Y+ LI G+C +  +  A  L SE+++ G+  D+V ++++   L ++ +V  A  
Sbjct: 461 APDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQN 520

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +FD     G+  D   Y   +DG C  G + +A+ +F  +     E ++  Y  L++G C
Sbjct: 521 IFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYC 580

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K GR+     LFR + +  +    + Y+I+I  L   G+   A+  F +M
Sbjct: 581 KIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEM 630



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
           +  CR+G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++
Sbjct: 80  SAACRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQL 137

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGK 145
               +  N++  N L+ GFC A   +EA  + +    + G  P+V S+++++  LC  GK
Sbjct: 138 LRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK 197

Query: 146 MDEASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
             +A  LL +M + G    PN   YNT++DGF   G VN+A +LF  M   G   ++ +Y
Sbjct: 198 SGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 257

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + +++  CK + ++ A +   +M++K + P+   YN L  G     Q + A ++F EM+R
Sbjct: 258 NSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
           H +  D       +  LCK G I EA ++F T+ +     D+ +YN +++G    G L  
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             +LF  +    +  D  T+N++I A    G +DKA  +F +M 
Sbjct: 378 MTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMR 421



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/308 (28%), Positives = 158/308 (51%), Gaps = 6/308 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + YN LI G C  G  + A  L  E+ N      +V       +++II+ LCK 
Sbjct: 459 GVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV------FFSSIINNLCKL 512

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +F    +  ++P+ V Y+ L+ G+C      +A  +F  M+  G++PNVV +
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVY 572

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N  CK G++DE   L   M+Q G++P+  +Y+ ++DG    GR   A+  F  M  
Sbjct: 573 CTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTE 632

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ +Y+I++ G  KN+  + A+ L+ E+ +  +K +++  NT+  G+F+  +VE 
Sbjct: 633 SGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEE 692

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF  + R  +      Y   I  L K G + EA ++F +++    E + R  N ++ 
Sbjct: 693 AKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVR 752

Query: 314 GLCKSGRL 321
            L K   +
Sbjct: 753 ELLKKNEI 760



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 156/332 (46%), Gaps = 9/332 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++   G   ++  ++++IN LC+ G  + A N+F+   N      V   P+ 
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 534

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ ++DG C  G ++KA  +F  M    I PNVV Y +L++G+C     +E   LF E
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFRE 594

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +++I++ L + G+   A      M + G+  +   YN ++ G      
Sbjct: 595 MLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRC 654

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A  LF  + +M  K N+ + + +I+G  + + +E A  L++ +    + P VV Y+ 
Sbjct: 655 FDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSI 714

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L +   VE A  +F  MQ  G   ++      +  L K   IV A      +    
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 774

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + L+      L+D     G  +   E  R LP
Sbjct: 775 FSLEHLTTMLLVDLFSSKGTCR---EHIRFLP 803



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 125/247 (50%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R N  + N L++GFC   R + A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSYSIL+   C   +   A  L   M   G    P+VV YNT+ 
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +   +  
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G   +G+ K A  +F+ + R  ++ DVVT ++++ +LC  GK+ +ARD+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 347 FDTMAMK 353


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/392 (34%), Positives = 216/392 (55%), Gaps = 26/392 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG--HTIVAL----------NLFEEMANGN 49
           E   +  K+   G +P+ +TY +L+N LC     H+ + L          ++F    +  
Sbjct: 260 EVVQMLEKMSARGLKPDCYTYGSLLNYLCALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 319

Query: 50  GEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
            + G++ K              PN V Y  +ID LCK G VD A+  F +M +E + PN+
Sbjct: 320 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 379

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           V +NSL++G C  + W  A+ L  EM+DQG+ PN V FN ++  LC  G++ E  RL++L
Sbjct: 380 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 439

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M  +GVRP+AF Y  L+ G+CL GR + AE++F  M S+G      +Y+ L++GYC    
Sbjct: 440 MEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 499

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A  L+ EML KG+ P VV YNT+  GLF+  +   A +L+  M   G   D + Y  
Sbjct: 500 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 559

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            ++GLCK+  + EA ++F++L     +L+I  +  +I  L K GR + A +LF ++P   
Sbjct: 560 ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANG 619

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L+ +VVTY ++   L  +G +++   LF  ME
Sbjct: 620 LVPNVVTYRLVAENLIEEGSLEEFDSLFSAME 651



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 191/364 (52%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+  +Y+ L+ G C       AL L   MAN +G     C PN VTYTT
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGR---SCPPNVVTYTT 212

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDGLCK    D+A+ +F +M D  + PN  TYN LIHG+     W E   +  +M  +G
Sbjct: 213 VIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARG 272

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++P+  ++  ++N LC    + E    L+LM++ G+ P+  ++N     +   G +++A 
Sbjct: 273 LKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 329

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F  M   G   NV +Y  LI+  CK   ++ A   +++M+++G+ P++V++N+L  GL
Sbjct: 330 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 389

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             + + ERA +L  EM   G+  +   + T I  LC  G ++E   L   +  +    D 
Sbjct: 390 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 449

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
            +Y  LI G C +GR   A ++F  +    L    VTYN ++H  C+  ++D A  LF +
Sbjct: 450 FSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFRE 509

Query: 366 MEAK 369
           M  K
Sbjct: 510 MLRK 513



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 175/383 (45%), Gaps = 27/383 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI-----------VALNLFEEMANGNG 50
           +A  LF +L +     +V  +N ++N + R                + ++LF  M     
Sbjct: 32  DALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVR--- 88

Query: 51  EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
           E  +   PNT TY+ +I  LC+ G +  +   F  +       N +  N L+ G C    
Sbjct: 89  ECSIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKR 148

Query: 111 WNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR---PNAF 166
             EA  + ++ M + G  P+ VS+++++   C   + +EA  LL +M     R   PN  
Sbjct: 149 VGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVV 208

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            Y T++DG C     +RAE +F  M   G K N  +Y+ LI+GY    + +  + +  +M
Sbjct: 209 TYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKM 268

Query: 227 LSKGIKPDVVIYNTL---FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            ++G+KPD   Y +L      L E+H         D M  +G++ D   +  F     K 
Sbjct: 269 SARGLKPDCYTYGSLLNYLCALSEMHS------FLDLMVENGLSPDHHIFNIFFSAYAKC 322

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G I +A+++F  +R      ++  Y  LID LCK GR+  A   F  +    +  ++V +
Sbjct: 323 GMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 382

Query: 344 NIMIHALCADGKMDKARDLFLDM 366
           N +++ LC   K ++A +L  +M
Sbjct: 383 NSLVYGLCTVDKWERAEELVYEM 405



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 137/292 (46%), Gaps = 6/292 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME   L   +   G  P+ F+Y  LI+G C  G T  A  +F+ M +      +   P  
Sbjct: 431 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVS------IGLSPTE 484

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ G C    +D A  LF +M  + + P VVTYN+++HG      ++EAK L++ 
Sbjct: 485 VTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLN 544

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G + ++ ++N+I+N LCK+  +DEA ++ + +   G++ N   +  ++      GR
Sbjct: 545 MINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGR 604

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   NV +Y ++     +   +E   SL+S M   G  P+  + N 
Sbjct: 605 KEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 664

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           L   L     + RA     ++     + +       I     + Y   A  L
Sbjct: 665 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIFTSDEYQHHAKSL 716



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 115/272 (42%), Gaps = 18/272 (6%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS-----------RLLELMIQ-- 158
           ++A  LF E++      +VV+FN I+N + +  +                 L   M++  
Sbjct: 31  DDALKLFDELLIHARPASVVAFNQILNAVSRASRASGRRSSSTSESELVVSLFNRMVREC 90

Query: 159 -IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            I V PN   Y+ L+   C  GR+  +   F  +   G + N    + L+ G C  K + 
Sbjct: 91  SIKVAPNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVG 150

Query: 218 GALS-LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR-HGVA--ADTWAY 273
            A+  L   M   G  PD V Y+ L  G    ++ E A +L   M   HG +   +   Y
Sbjct: 151 EAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTY 210

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            T IDGLCK      A  +F+ +     + +   YNCLI G    G+ K   ++   +  
Sbjct: 211 TTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSA 270

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             L  D  TY  +++ LCA  +M    DL ++
Sbjct: 271 RGLKPDCYTYGSLLNYLCALSEMHSFLDLMVE 302


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 131/395 (33%), Positives = 216/395 (54%), Gaps = 29/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  L  ++R  G +P+ F+Y+TL+ GLC+TG   +AL +FE+ +NG+    VV      
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C+P+ VT+T ++DGLCK   + +A+++   M+D N  
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNV+TY+SLI G C      +A+ +F  M+ +G++PNVV++N +++  C    +D A  L
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +E M   G  P+   YNTL+DG C TGR   A  LF  M++  C  +V +YS LI G+CK
Sbjct: 429 MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCK 488

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + I+ A +L+ +ML + + PDVV ++TL  G      V+ A +L +EM     + D + 
Sbjct: 489 LERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYT 548

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + +DG CK G +VEA  + + +     + ++  Y  LID  C++G+  +A+ L   + 
Sbjct: 549 YTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV 608

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +  +V+TY  +I   C  G +++AR +   +E
Sbjct: 609 GNGVQPNVITYRSLIGGFCGTGDLEEARKILERLE 643



 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 201/366 (54%), Gaps = 6/366 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  +++  G  PNV TY+T+I+G CR      A  LF +M   NG     C PN VT
Sbjct: 180 AYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE-NG-----CMPNLVT 233

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++ GLC+ G +D+A EL  +M++  + P+  +Y++L+ G C     + A  +F +  
Sbjct: 234 YNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNS 293

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +    P+VV+++ ++  LCK G++DEA +L E M +    P+   +  LMDG C   R+ 
Sbjct: 294 NGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQ 353

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+++  +ME   C  NV +YS LI+G CK  ++  A  ++  M+ +GI+P+VV YN+L 
Sbjct: 354 EAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLI 413

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G    + V+ A  L +EM   G   D   Y T IDGLCK G   EA  LF  ++     
Sbjct: 414 HGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCN 473

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y+CLI G CK  R+ +A  LF  + +  ++ DVVT++ ++   C  G +D A  L
Sbjct: 474 PDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 533

Query: 363 FLDMEA 368
             +M A
Sbjct: 534 LEEMVA 539



 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 128/359 (35%), Positives = 201/359 (55%), Gaps = 6/359 (1%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R   CE NV T+  +I+GLC+      A   F +M       G V  PN  TY  +I+G 
Sbjct: 118 RSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKK----GTV--PNEWTYNVLINGF 171

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           CK   V +A  L  +MK+  + PNVVTY+++IHGFC     + A  LF +M++ G  PN+
Sbjct: 172 CKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNL 231

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V++N +++ LC+NG MDEA  LL+ M + G++P+ F Y+TLM G C TG+++ A ++F  
Sbjct: 232 VTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFED 291

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
             +  C  +V +YS LI G CK   ++ A  L+ +M     +PDVV +  L  GL +  +
Sbjct: 292 NSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDR 351

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ A ++ + M+      +   Y + IDGLCK G + +A E+F+ + +   E ++  YN 
Sbjct: 352 LQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNS 411

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI G C +  +  A  L   +     + D++TYN +I  LC  G+  +A  LF DM+AK
Sbjct: 412 LIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 202/367 (55%), Gaps = 9/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  G  P+   YN +I+ LC+  +T  AL+ F  M          C+ N +
Sbjct: 77  KACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---------CEKNVI 127

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDGLCK   + +A   F KMK +   PN  TYN LI+GFC  +  + A  L  EM
Sbjct: 128 TWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEM 187

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PNVV+++ +++  C+  K+D A +L   M++ G  PN   YNTL+ G C  G +
Sbjct: 188 KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLM 247

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M   G + + FSY  L+ G CK  +I+ AL ++ +  +    PDVV Y+TL
Sbjct: 248 DEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTL 307

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A KLF++M+ +    D   +   +DGLCK   + EA ++  T+     
Sbjct: 308 IAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNC 367

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y+ LIDGLCK+G+++ A E+F+ +    +  +VVTYN +IH  C    +D A  
Sbjct: 368 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALL 427

Query: 362 LFLDMEA 368
           L  +M A
Sbjct: 428 LMEEMTA 434



 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 131/364 (35%), Positives = 197/364 (54%), Gaps = 10/364 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++ V G EPNV TYN+LI+G C T     AL L EEM          C P+ +
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMT------ATGCLPDII 442

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDGLCK G   +A  LF  MK +  NP+V+TY+ LI GFC     + A+ LF +M
Sbjct: 443 TYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDM 502

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q V P+VV+F+ ++   C  G +D+A RLLE M+     P+ + Y +L+DGFC  GR+
Sbjct: 503 LKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRM 562

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M   GC+ NV +Y+ LI+ +C+  +   A  L  EM+  G++P+V+ Y +L
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622

Query: 242 FIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
             G      +E A K+ + ++R     AD +AYR  +DGLC+ G +  A+EL   ++   
Sbjct: 623 IGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 682

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFR--SLPRGVLIADVVTYNIMIHALCADGKMDK 358
                  Y  LI GLC+   L  A E+    +L R     +   Y  +I  L  +G+ ++
Sbjct: 683 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSR-PNAEAYEAVIQELAREGRHEE 741

Query: 359 ARDL 362
           A  L
Sbjct: 742 ANAL 745



 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/401 (32%), Positives = 205/401 (51%), Gaps = 42/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+R   CEP+V T+  L++GLC+      A  + E M + N      C PN +
Sbjct: 319 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN------CTPNVI 372

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++IDGLCK G V  A+E+F +M    I PNVVTYNSLIHGFC  N  + A  L  EM
Sbjct: 373 TYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEM 432

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASR------------------------------ 151
              G  P+++++N +++ LCK G+  EA+R                              
Sbjct: 433 TATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERI 492

Query: 152 -----LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                L + M++  V P+   ++TL++G+C  G V+ AE L   M +  C  +V++Y+ L
Sbjct: 493 DMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSL 552

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G+CK   +  A  +   M  +G +P+VV Y  L        +   A++L +EM  +GV
Sbjct: 553 VDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGV 612

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLKIAW 325
             +   YR+ I G C  G + EA ++   L R    + D+ AY  ++DGLC++GR+  A 
Sbjct: 613 QPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAAL 672

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           EL  ++ +         Y  +I  LC   ++ KA ++  +M
Sbjct: 673 ELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEM 713



 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 193/357 (54%), Gaps = 11/357 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG-EFGVVCKPNTVTYTTIIDGLCK 72
           G + NV+TYN L   L R        ++ +     NG   G+   PN  TY  +I GLCK
Sbjct: 19  GFDHNVYTYNRLFEALLRARRIDETCHILK-----NGWPPGIT--PNVFTYAVVIQGLCK 71

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +DKA EL  +M++    P+   YN +IH  C A +  +A   F  M     + NV++
Sbjct: 72  SGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVIT 128

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           + ++++ LCK  ++ EA+     M + G  PN + YN L++GFC   +V+RA  L   M+
Sbjct: 129 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 188

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   NV +YS +I+G+C+  +++ A  L+ +M+  G  P++V YNTL  GL     ++
Sbjct: 189 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMD 248

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A++L DEM+  G+  D ++Y T + GLCK G I  A+++F          D+ AY+ LI
Sbjct: 249 EAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLI 308

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            GLCK+GRL  A +LF  +       DVVT+  ++  LC   ++ +A+ +   ME +
Sbjct: 309 AGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 365



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 154/312 (49%), Gaps = 32/312 (10%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           K +  + NV TYN L      A   +E   +       G+ PNV ++ V++  LCK+G +
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 147 DEASRLLELMIQIGVRPNAFVYN--------------------------------TLMDG 174
           D+A  LLE M + G  P+A +YN                                 ++DG
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDG 135

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C   R+  A   F  M+  G   N ++Y++LING+CK  ++  A  L  EM   G+ P+
Sbjct: 136 LCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPN 195

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+T+  G     +V+ A+KLF +M  +G   +   Y T + GLC+NG + EA EL  
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +R    + D  +Y+ L+ GLCK+G++ +A ++F     G    DVV Y+ +I  LC  G
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 355 KMDKARDLFLDM 366
           ++D+A  LF  M
Sbjct: 316 RLDEACKLFEKM 327



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 129/247 (52%), Gaps = 8/247 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V T++TL+ G C  G    A  L EEM   +      C P+  TYT+++DG CK G +
Sbjct: 509 PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASD------CSPDVYTYTSLVDGFCKVGRM 562

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+ +  +M      PNVVTY +LI  FC A     A  L  EM+  GVQPNV+++  +
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622

Query: 137 MNELCKNGKMDEASRLLE-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +   C  G ++EA ++LE L      + + F Y  +MDG C TGR++ A EL  +++  G
Sbjct: 623 IGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSG 682

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQVERA 254
                  Y  LI G C+ KE+  A+ +  EM LS+  +P+   Y  +   L    + E A
Sbjct: 683 TPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEA 742

Query: 255 FKLFDEM 261
             L DE+
Sbjct: 743 NALADEL 749



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 8/189 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++   GC+PNV TY  LI+  CR G   VA  L EEM  GNG      +PN 
Sbjct: 563 VEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMV-GNG-----VQPNV 616

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +TY ++I G C  G +++A+++  ++ +DEN   ++  Y  ++ G C     + A  L  
Sbjct: 617 ITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLE 676

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM-IQIGVRPNAFVYNTLMDGFCLT 178
            +   G  P    +  ++  LC+  ++ +A  +LE M +    RPNA  Y  ++      
Sbjct: 677 AIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELARE 736

Query: 179 GRVNRAEEL 187
           GR   A  L
Sbjct: 737 GRHEEANAL 745



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 45/106 (42%)

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           ++ G   + + Y    + L +   I E   + +         ++  Y  +I GLCKSG L
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             A EL   +     + D   YN +IHALC      KA D F  ME
Sbjct: 76  DKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME 121


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 207/354 (58%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N   +   + G    A+++F +M            P+ V+Y  +ID LCK 
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQG------LSPDAVSYGALIDALCKL 426

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A+  F +M +E + P++V ++SL++G C  + W + + LF EM++ G+ PN+V F
Sbjct: 427 GRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFF 486

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I+  LCK G++ E  RL++ +  +GVRP+   YNTL+DG CL G ++ A +L   M S
Sbjct: 487 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 546

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K + FSY+ L++GYCK   I+ A S + +MLS GI P VV YNT+  GLF+  +   
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M   G   D + Y   ++GLCK+  + EA+++F+ L     +L+I  +N +I 
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR + A +LF ++P   L+ +VVTY +++  L  +G +++   LF  ME
Sbjct: 667 ALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAME 720



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 202/426 (47%), Gaps = 76/426 (17%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           +V+ C PNV +Y+T+ING    G      NLF EM +          P+ VTYTT+IDGL
Sbjct: 195 QVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRG------IPPDVVTYTTVIDGL 248

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE----------------- 113
           CK    D+A+ +F +M D  + PN+ TYN LIHG+     W E                 
Sbjct: 249 CKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNC 308

Query: 114 ------------------AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
                             A+  F  M+ +G++P+V ++ ++++     G + E   LL L
Sbjct: 309 CTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNL 368

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G+ PN  ++N     +   G +++A ++F  M   G   +  SY  LI+  CK   
Sbjct: 369 MVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGR 428

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM-------------- 261
           ++ A   +++M+++G+ PD+V++++L  GL  + + E+  +LF EM              
Sbjct: 429 VDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNT 488

Query: 262 --------------QR-------HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                         QR        GV  D  +Y T IDG C  G I EA +L   +  + 
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D  +YN L+ G CK+GR+  A+  FR +    +   VVTYN ++H L    +  +A+
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608

Query: 361 DLFLDM 366
           +L+L+M
Sbjct: 609 ELYLNM 614



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 193/362 (53%), Gaps = 3/362 (0%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+  +YN L+ GLC       AL L   MA+   +    C PN V+Y+T
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMAD---DQVWSCPPNVVSYST 208

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G   EG VDK   LFL+M D  I P+VVTY ++I G C A  ++ A+ +F +M+D G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+PN+ ++N +++     GK  E  R+LE M   G +PN   Y +L++  C  GR   A 
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F SM   G K +V +Y I+++GY     +     L + M++ GI P+  I+N  F   
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   +++A  +F++M++ G++ D  +Y   ID LCK G + +A   F  +       DI
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             ++ L+ GLC   + +   ELF  +    +  ++V +N ++  LC +G++ + + L   
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS 508

Query: 366 ME 367
           +E
Sbjct: 509 IE 510



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 193/368 (52%), Gaps = 8/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA   F  +   G +P+V TY  +++G    G      +L   M ANG         PN 
Sbjct: 326 EARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANG-------ISPNH 378

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             +        K G +DKA ++F KM+ + ++P+ V+Y +LI   C     ++A+  F +
Sbjct: 379 HIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQ 438

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++GV P++V F+ ++  LC   K ++   L   M+ +G+ PN   +NT++   C  GR
Sbjct: 439 MINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGR 498

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V   + L  S+E MG + +V SY+ LI+G+C    I+ A  L   M+S G+KPD   YNT
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +++ A+  F +M  +G+      Y T + GL +     EA EL+  +    
Sbjct: 559 LLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSG 618

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + DI  YN +++GLCKS  +  A ++F++L    L  +++T+NIMI AL   G+ + A 
Sbjct: 619 TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAM 678

Query: 361 DLFLDMEA 368
           DLF  + A
Sbjct: 679 DLFAAIPA 686



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 176/348 (50%), Gaps = 10/348 (2%)

Query: 23  NTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           N L+NGLC       A++ L + M     E G  C P+TV+Y  ++ GLC E   ++A E
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQRMP----ELG--CMPDTVSYNILLKGLCNEKRAEEALE 186

Query: 82  LFLKMKDENI---NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           L   M D+ +    PNVV+Y+++I+GF      ++   LF+EMMD+G+ P+VV++  +++
Sbjct: 187 LLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVID 246

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LCK    D A  + + MI  GV+PN   YN L+ G+   G+      +   M + G K 
Sbjct: 247 GLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKP 306

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N  +Y  L+N  CKN     A   +  M+ KGIKP V  Y  +  G      +     L 
Sbjct: 307 NCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLL 366

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           + M  +G++ +   +  F     K G I +A+++F  +R      D  +Y  LID LCK 
Sbjct: 367 NLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKL 426

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GR+  A   F  +    +  D+V ++ +++ LC   K +K  +LF +M
Sbjct: 427 GRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEM 474



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/431 (28%), Positives = 200/431 (46%), Gaps = 69/431 (16%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME   L   +   G  P+V +YNTLI+G C  G    A  L E M +      V  KP++
Sbjct: 500 MEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS------VGLKPDS 553

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y T++ G CK G +D A   F KM    I P VVTYN+++HG      ++EAK L++ 
Sbjct: 554 FSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLN 613

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G + ++ ++N+I+N LCK+  +DEA ++ + +   G++ N   +N ++      GR
Sbjct: 614 MINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGR 673

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   NV +Y +++    +   +E   SL+S M   G  P+  + N 
Sbjct: 674 KEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733

Query: 241 LFIGLFEIHQVERA----------------------FKLF--DEMQRH------------ 264
           L   L     + RA                        +F  DE Q H            
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILN 793

Query: 265 ---------------------------GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
                                      G+  D   Y T + GL + G   EA EL+ ++ 
Sbjct: 794 EANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMI 853

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             + +++I  YN +++GLCKS  +  A+++F+SL    L  +++T+NIMI AL   G+ +
Sbjct: 854 NSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKE 913

Query: 358 KARDLFLDMEA 368
            A DLF  + A
Sbjct: 914 DAMDLFAAIPA 924



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 202/430 (46%), Gaps = 71/430 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA+ L   +   G +P+ F+YNTL++G C+ G    A + F +M +NG         P  
Sbjct: 536 EASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNG-------ITPGV 588

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY TI+ GL +     +AKEL+L M +     ++ TYN +++G C +N  +EA  +F  
Sbjct: 589 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQN 648

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEA------------------------------- 149
           +  +G+Q N+++FN+++  L K G+ ++A                               
Sbjct: 649 LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGS 708

Query: 150 ----SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                 L   M + G  PN+ + N L+      G ++RA      ++         + S+
Sbjct: 709 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSM 768

Query: 206 LINGYC----------------------------KNKEIEGALSLYSEMLSKGIKPDVVI 237
           LI+ +                             K + I+ A SL+ EML KG+ PDVV 
Sbjct: 769 LISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVT 828

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNT+  GLF+  +   A +L+  M       + + Y   ++GLCK+  + EA ++F++L 
Sbjct: 829 YNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLC 888

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +L+I  +N +I  L K GR + A +LF ++P   L+ DVVTY ++   L  +G ++
Sbjct: 889 SKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLE 948

Query: 358 KARDLFLDME 367
           +   LFL ME
Sbjct: 949 EFDGLFLTME 958



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 38/353 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +F  L   G + N+ T+N +I  L + G    A++LF  + ANG          N 
Sbjct: 641 EAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG-------LVQNV 693

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +++ L +EG +++   LF  M+     PN    N+L+    +  D + A   ++ 
Sbjct: 694 VTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGA-YLS 752

Query: 121 MMDQ---GVQPNVVSFNV--------------------IMNE------LCKNGKMDEASR 151
            +D+    V+ +  S  +                    I+NE      + K  ++D+A  
Sbjct: 753 KLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYS 812

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L   M+  G+ P+   YNT++ G   TGR + A+EL++SM +   + N+++Y+I++NG C
Sbjct: 813 LFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLC 872

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+  ++ A  ++  + SKG++ +++ +N +   L +  + E A  LF  +  +G+  D  
Sbjct: 873 KSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVV 932

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            YR   + L + G + E   LF T+      LD R  N L+  L + G +  A
Sbjct: 933 TYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA 985



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 130/277 (46%), Gaps = 4/277 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA- 149
           + PN  TY+ LI  FC           F  ++  G + + +  N ++N LC   ++ EA 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM---ESMGCKHNVFSYSIL 206
             LL+ M ++G  P+   YN L+ G C   R   A EL   M   +   C  NV SYS +
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING+    +++   +L+ EM+ +GI PDVV Y T+  GL +    +RA  +F +M  +GV
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +   Y   I G    G   E V +   +     + +   Y  L++ LCK+GR + A  
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            F S+    +   V TY IM+H     G + +  DL 
Sbjct: 330 FFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLL 366



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 121/248 (48%), Gaps = 4/248 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN  ++++++   C+ G ++       L+++ G R +  V N L++G C   RV  A 
Sbjct: 90  VAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAM 149

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI---KPDVVIYNTL 241
           ++ +  M  +GC  +  SY+IL+ G C  K  E AL L   M    +    P+VV Y+T+
Sbjct: 150 DVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTV 209

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F   QV++ + LF EM   G+  D   Y T IDGLCK      A  +F+ +     
Sbjct: 210 INGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGV 269

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +I  YNCLI G    G+ K    +   +  G    +  TY  +++ LC +G+  +AR 
Sbjct: 270 KPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARF 329

Query: 362 LFLDMEAK 369
            F  M  K
Sbjct: 330 FFDSMIGK 337



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/224 (25%), Positives = 106/224 (47%)

Query: 76   VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            +D A  LF +M  + + P+VVTYN+++HG      ++EAK L++ M++   Q N+ ++N+
Sbjct: 807  IDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI 866

Query: 136  IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
            I+N LCK+  +DEA ++ + +   G++ N   +N ++      GR   A +LF ++ + G
Sbjct: 867  ILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 926

Query: 196  CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
               +V +Y ++     +   +E    L+  M   G   D  + N L   L +   + RA 
Sbjct: 927  LVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAG 986

Query: 256  KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                ++     + +       I    +  Y   A  L    R+L
Sbjct: 987  AYLSKLDEKNFSLEASTTSELISLFSRGEYQHHAKSLPEKYRLL 1030



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 1/206 (0%)

Query: 58   PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            P+ VTY TI+ GL + G   +AKEL+L M +     N+ TYN +++G C +N  +EA  +
Sbjct: 824  PDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKM 883

Query: 118  FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            F  +  +G+Q N+++FN+++  L K G+ ++A  L   +   G+ P+   Y  + +    
Sbjct: 884  FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943

Query: 178  TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             G +   + LF++ME  G   +    + L+    +  +I  A +  S++  K    +   
Sbjct: 944  EGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAST 1003

Query: 238  YNTLFIGLFEIHQVERAFKLFDEMQR 263
             + L I LF   + +   K   E  R
Sbjct: 1004 TSEL-ISLFSRGEYQHHAKSLPEKYR 1028


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/354 (38%), Positives = 209/354 (59%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+++T+N LI      G    A+ +F EM     + GV  KP+ VTY T+I  LC+ 
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR----DHGV--KPHVVTYMTVIAALCRI 444

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F +M D+ + P+   Y+ LI GFC      +AK L  E+M+ G++ ++V F
Sbjct: 445 GKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFF 504

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             I+N LCK G++ +A  + +L + +G+ P+A VYN LMDG+CL G++ +A  +F +M S
Sbjct: 505 GSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV  Y  L+NGYCK   I+  LSL+ EML KGIKP  ++YN +  GLFE  +   
Sbjct: 565 AGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 624

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   F EM   G+A +   Y   + GL KN    EA+ LF+ LR +  ++DI   N +I 
Sbjct: 625 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 684

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+ ++ R++ A +LF S+ R  L+   VTY+IMI  L  +G +++A D+F  M+
Sbjct: 685 GMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQ 738



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 189/351 (53%), Gaps = 4/351 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P+VF+YN L+  LC  G +  A +L   MA G    G VC P+ V Y T+IDG  K
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG----GTVCSPDVVAYNTVIDGFFK 233

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V+KA +LF +M    I P++VTY+S++H  C A   ++A+    +M+++GV P+  +
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++      G+  EA R+ + M +  + P+    NTLM   C  G++  A ++F +M 
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   +VFSY+I++NGY     +     L+  ML  GI PD+  +N L         ++
Sbjct: 354 MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLD 413

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A  +F+EM+ HGV      Y T I  LC+ G + +A+E F  +       D  AY+CLI
Sbjct: 414 KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            G C  G L  A EL   +    +  D+V +  +I+ LC  G++  A+++F
Sbjct: 474 QGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524



 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 191/349 (54%), Gaps = 6/349 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V  YNT+I+G  + G    A +LF+EM     + G+   P+ VTY++++  LCK  
Sbjct: 217 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDLVTYSSVVHALCKAR 270

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +DKA+    +M ++ + P+  TYN+LI+G+     W EA  +F EM  Q + P+VV+ N
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +M  LCK GK+ EA  + + M   G  P+ F Y  +++G+   G +    +LF  M   
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +++++++LI  Y     ++ A+ +++EM   G+KP VV Y T+   L  I +++ A
Sbjct: 391 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            + F++M   GV  D +AY   I G C +G +++A EL   +      LDI  +  +I+ 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCK GR+  A  +F       L  D V YN+++   C  GKM+KA  +F
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 194/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++R     P+V   NTL+  LC+ G    A ++F+ MA   G+      P+  
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVF 362

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YT +++G   +G +    +LF  M  + I P++ T+N LI  +      ++A  +F EM
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV+P+VV++  ++  LC+ GKMD+A      MI  GV P+ + Y+ L+ GFC  G +
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   + + G + ++  +  +IN  CK   +  A +++   ++ G+ PD V+YN L
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E+A ++FD M   G+  +   Y T ++G CK G I E + LFR +     
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     YN +IDGL ++GR   A   F  +    +  +  TY+I++  L  +   D+A  
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 362 LFLDMEA 368
           LF ++ A
Sbjct: 663 LFKELRA 669



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 171/355 (48%), Gaps = 41/355 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G +P+V TY T+I  LCR G    A+  F +M +     GVV  P+  
Sbjct: 414 KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ----GVV--PDKY 467

Query: 62  TYTTIIDGLCKEGFVDKAKELFLK--------------------------MKDENI---- 91
            Y  +I G C  G + KAKEL  +                          M  +NI    
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT 527

Query: 92  -----NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                +P+ V YN L+ G+C      +A  +F  M+  G++PNVV +  ++N  CK G++
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DE   L   M+Q G++P+  +YN ++DG    GR   A+  F  M   G   N  +YSI+
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + G  KN+  + A+ L+ E+ +  +K D++  NT+  G+F+  +VE A  LF  + R G+
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
                 Y   I  L K G + EA ++F +++    E D R  N ++  L K   +
Sbjct: 708 VPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 184/367 (50%), Gaps = 7/367 (1%)

Query: 1   MEAAALFMKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+ A  F++  V  G  P+ +TYN LI G   TG    A+ +F+EM   +        P+
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS------ILPD 325

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V   T++  LCK G + +A+++F  M  +  NP+V +Y  +++G+       +   LF 
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+  G+ P++ +FNV++      G +D+A  +   M   GV+P+   Y T++   C  G
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +++ A E F  M   G   + ++Y  LI G+C +  +  A  L SE+++ G++ D+V + 
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           ++   L ++ +V  A  +FD     G+  D   Y   +DG C  G + +A+ +F  +   
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             E ++  Y  L++G CK GR+     LFR + +  +    + YNI+I  L   G+   A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 360 RDLFLDM 366
           +  F +M
Sbjct: 626 KVKFHEM 632



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
           +  C +G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++
Sbjct: 82  SAACGSGPAL-AVALFNRAAS-RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQL 139

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGK 145
               +  + +  + L+ GFC A   +EA  + +    + G  P+V S+N+++  LC  GK
Sbjct: 140 LRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGK 199

Query: 146 MDEASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
             +A  LL +M + G    P+   YNT++DGF   G VN+A +LF  M   G   ++ +Y
Sbjct: 200 SGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +++  CK + ++ A +   +M++KG+ PD   YN L  G     Q + A ++F EM+R
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
             +  D  A  T +  LCK G I EA ++F T+ +     D+ +Y  +++G    G L  
Sbjct: 320 QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVD 379

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             +LF  +    +  D+ T+N++I A    G +DKA  +F +M 
Sbjct: 380 MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 423



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R +A + + L+ GFC   R + A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSY+IL+   C   +   A  L   M   G    PDVV YNT+ 
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +      
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   YN LI G   +G+ K A  +F+ + R  ++ DVV  N ++ +LC  GK+ +ARD+
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 349 FDTMAMK 355


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 144/396 (36%), Positives = 220/396 (55%), Gaps = 31/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA  +F  + + G  P+VF+YN ++NG    G  +   +LF+ M  G+G   V+C     
Sbjct: 342 EARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVL 400

Query: 57  -------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                                    KPN +TYTT+I  LC+ G +D A E F +M D+ +
Sbjct: 401 IKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 460

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+   Y+ LI GFC      +AK L  E+M+ G+  ++V F+ I+N LCK G++ +A  
Sbjct: 461 APDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQN 520

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           + +L + +G+ P A VY+ LMDG+CL G++ +A  +F +M S G + N   Y  L+NGYC
Sbjct: 521 IFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYC 580

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   I+  LSL+ EML KGIKP  ++YN +  GLFE  +   A   F EM   G+A +  
Sbjct: 581 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 640

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   + GL KN    EA+ LF+ LR +  ++DI   N +I G+ ++ R++ A +LF S+
Sbjct: 641 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 700

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            R  L+  VVTY+IMI  L  +G +++A D+F  M+
Sbjct: 701 SRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/393 (32%), Positives = 198/393 (50%), Gaps = 39/393 (9%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +    GC P+VF+Y+ L+  LC  G +  A +L   MA G    G VC P+ V Y T
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYNT 224

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN---------------- 109
           +IDG  KEG V+KA +LF +M    I P+ VTY+S++H  C A                 
Sbjct: 225 VIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKG 284

Query: 110 -------------------DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                               W EA  +F EM  Q + P+VV+FN++M  LCK GK+ EA 
Sbjct: 285 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEAR 344

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            + + M   G  P+ F YN +++G+   G +    +LF  M   G    + ++++LI  Y
Sbjct: 345 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAY 404

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
                ++ A+ +++EM   G+KP+V+ Y T+   L  I +++ A + F++M   GVA D 
Sbjct: 405 ANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 464

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           +AY   I G C +G +++A EL   +      LDI  ++ +I+ LCK GR+  A  +F  
Sbjct: 465 YAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDL 524

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
                L    V Y++++   C  GKM+KA  +F
Sbjct: 525 TVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++R     P+V T+N L+  LC+ G    A ++F+ MA   G+      P+  
Sbjct: 307 EAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVF 360

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +++G   +G +    +LF  M  + I P + T+N LI  +      ++A  +F EM
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV+PNV+++  ++  LC+ GKMD+A      MI  GV P+ + Y+ L+ GFC  G +
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   + + G   ++  +S +IN  CK   +  A +++   ++ G+ P  V+Y+ L
Sbjct: 481 LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E+A ++FD M   G+  +   Y T ++G CK G I E + LFR +     
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     YN +IDGL ++GR   A   F  +    +  +  TY+I++  L  +   D+A  
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 660

Query: 362 LFLDMEA 368
           LF ++ A
Sbjct: 661 LFKELRA 667



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 184/367 (50%), Gaps = 7/367 (1%)

Query: 1   MEAAALFMKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+ A  F++  V  G  PN +TYN LI G   TG    A+ +F+EM   +        P+
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS------ILPD 323

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VT+  ++  LCK G + +A+++F  M  +  NP+V +YN +++G+       +   LF 
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+  G+ P + +FNV++      G +D+A  +   M   GV+PN   Y T++   C  G
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +++ A E F  M   G   + ++Y  LI G+C +  +  A  L SE+++ G+  D+V+++
Sbjct: 444 KMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFS 503

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           ++   L ++ +V  A  +FD     G+      Y   +DG C  G + +A+ +F  +   
Sbjct: 504 SIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSA 563

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             E +   Y  L++G CK GR+     LFR + +  +    + YNI+I  L   G+   A
Sbjct: 564 GIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 623

Query: 360 RDLFLDM 366
           +  F +M
Sbjct: 624 KVKFHEM 630



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 170/349 (48%), Gaps = 29/349 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           +A  +F ++R  G +PNV TY T+I  LCR G    A+  F +M +              
Sbjct: 412 KAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 48  -GNGEFGVVCKP--------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G    G + K               + V +++II+ LCK G V  A+ +F    +  ++
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLH 531

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P  V Y+ L+ G+C      +A  +F  M+  G++PN V +  ++N  CK G++DE   L
Sbjct: 532 PTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSL 591

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M+Q G++P+  +YN ++DG    GR   A+  F  M   G   N  +YSI++ G  K
Sbjct: 592 FREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFK 651

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N+  + A+ L+ E+ +  +K D++  NT+  G+F+  +VE A  LF  + R G+      
Sbjct: 652 NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 711

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           Y   I  L K G + EA ++F +++    E D R  N ++  L K   +
Sbjct: 712 YSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 760



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 176/345 (51%), Gaps = 7/345 (2%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
           +  CR+G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++
Sbjct: 80  SAACRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQL 137

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGK 145
               +  +++  N L+ GFC A   +EA  + +    + G  P+V S+++++  LC  GK
Sbjct: 138 LRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK 197

Query: 146 MDEASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
             +A  LL +M + G    P+   YNT++DGF   G VN+A +LF  M   G   +  +Y
Sbjct: 198 SGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTY 257

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +++  CK + ++ A +   +M++KG+ P+   YN L  G     Q + A ++F EM+R
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
             +  D   +   +  LCK G I EA ++F T+ +     D+ +YN +++G    G L  
Sbjct: 318 QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377

Query: 324 AWELFRSLPRGVLIADVV-TYNIMIHALCADGKMDKARDLFLDME 367
             +LF  L  G  IA V+ T+N++I A    G +DKA  +F +M 
Sbjct: 378 MTDLF-DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 421



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 124/247 (50%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R +  + N L+ GFC   R + A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSYSIL+   C   +   A  L   M   G    PDVV YNT+ 
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +      
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G   +G+ K A  +F+ + R  ++ DVVT+N+++ +LC  GK+ +ARD+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 347 FDTMAMK 353


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  252 bits (643), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 217/386 (56%), Gaps = 28/386 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++    C+PNV T+ TL+NGLCR G  + A+ L + M     E G+  +PN +
Sbjct: 166 EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRML----EDGL--QPNQI 215

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKD-ENINPNVVTY-----NSLIHGFCYANDWNEAK 115
           TY TI+DG+CK G    A  L  KM++  +I PNVV +       +I+GFC +  W+EA+
Sbjct: 216 TYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQ 275

Query: 116 CLFIEMMD-QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
            L  EM++ + + P+VV++N ++N   K GK  EA  L + M+  G+ P+   Y++++DG
Sbjct: 276 QLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDG 335

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           FC   R++ AE +F  M + GC  ++ +++ LI GYC+ K ++  + L  EM   G+  +
Sbjct: 336 FCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 395

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
            + Y TL  G  ++  +  A  L  EM   GV  +     T +DGLC NG + +A+E+F+
Sbjct: 396 TITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 455

Query: 295 TLRILKYEL-----------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
            ++  K ++           D++ YN LI GL   G+   A EL+  +P   ++ D +TY
Sbjct: 456 AMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITY 515

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
           N +IH LC   ++D+A  +F  M +K
Sbjct: 516 NSVIHGLCKQSRLDEATQMFDSMGSK 541



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/383 (32%), Positives = 206/383 (53%), Gaps = 22/383 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +PN  TY T+++G+C+ G T+ ALNL  +M   +       KPN 
Sbjct: 196 VEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH-----IKPNV 250

Query: 61  VTY-----TTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEA 114
           V +     T +I+G C  G   +A++L  +M + + I+P+VVTYN+LI+ F     + EA
Sbjct: 251 VIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEA 310

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           + L+ EM+ +G+ P+ ++++ +++  CK  ++D A  +  LM   G  P+   +NTL+ G
Sbjct: 311 EELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAG 370

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +C   RV+   +L   M   G   N  +Y+ LI+G+C+  ++  A  L  EM+S G+ P+
Sbjct: 371 YCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPN 430

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQR-----------HGVAADTWAYRTFIDGLCKN 283
           VV  NTL  GL +  +++ A ++F  MQ+           +GV  D   Y   I GL   
Sbjct: 431 VVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINE 490

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G  +EA EL+  +       D   YN +I GLCK  RL  A ++F S+       +VVT+
Sbjct: 491 GKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTF 550

Query: 344 NIMIHALCADGKMDKARDLFLDM 366
             +I+  C  G++D   +LF +M
Sbjct: 551 TTLINGYCKAGRVDDGLELFCEM 573



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 170/345 (49%), Gaps = 17/345 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  P+  TY+++I+G C+      A ++F  MA         C P+ +
Sbjct: 309 EAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG------CSPDII 362

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I G C+   VD   +L  +M +  +  N +TY +LIHGFC   D N A+ L  EM
Sbjct: 363 TFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM 422

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI-----------GVRPNAFVYNT 170
           +  GV PNVV+ N +++ LC NGK+ +A  + + M +            GV P+   YN 
Sbjct: 423 VSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNI 482

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+ G    G+   AEEL+  M   G   +  +Y+ +I+G CK   ++ A  ++  M SK 
Sbjct: 483 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKS 542

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             P+VV + TL  G  +  +V+   +LF EM R G+ A+   Y T I G  K G I  A+
Sbjct: 543 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGAL 602

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
           ++F+ +       D      ++ GL     LK A  +   L   V
Sbjct: 603 DIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQMSV 647



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 164/314 (52%), Gaps = 18/314 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   GC P++ T+NTLI G CR       + L  EM     E G+V   NT+T
Sbjct: 345 AEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT----EAGLVA--NTIT 398

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM- 121
           YTT+I G C+ G ++ A++L  +M    + PNVVT N+L+ G C      +A  +F  M 
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458

Query: 122 ---MD-------QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
              MD        GV+P+V ++N++++ L   GK  EA  L E M   G+ P+   YN++
Sbjct: 459 KSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSV 518

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G C   R++ A ++F SM S     NV +++ LINGYCK   ++  L L+ EM  +GI
Sbjct: 519 IHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGI 578

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             + + Y TL  G  ++  +  A  +F EM   GV  DT   R  + GL     +  AV 
Sbjct: 579 VANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVA 638

Query: 292 LFRTLRI-LKYELD 304
           +   L++ + Y+L+
Sbjct: 639 MLEDLQMSVGYQLE 652



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 162/367 (44%), Gaps = 44/367 (11%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF +M            P+ + +  ++  + + G +D    L  KM+   +  N  +
Sbjct: 62  AIDLFGDMVRSRP------LPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYS 115

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN----------------------- 134
           +  L+  FC  +    A   F ++   G  P VV+F+                       
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175

Query: 135 --------VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
                    +MN LC+ G++ EA  LL+ M++ G++PN   Y T++DG C  G    A  
Sbjct: 176 KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALN 235

Query: 187 LFVSMESMG-CKHNVFSYSI-----LINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYN 239
           L   ME +   K NV  + +     +ING+C +     A  L  EML  K I PDVV YN
Sbjct: 236 LLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYN 295

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L     +  +   A +L+DEM   G+   T  Y + IDG CK   +  A  +F  +   
Sbjct: 296 ALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATK 355

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               DI  +N LI G C++ R+    +L   +    L+A+ +TY  +IH  C  G ++ A
Sbjct: 356 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 415

Query: 360 RDLFLDM 366
           +DL  +M
Sbjct: 416 QDLLQEM 422



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 133/275 (48%), Gaps = 15/275 (5%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L  GF       +A  LF +M+     P+V+ F  +M  + + G++D    L   M    
Sbjct: 49  LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRR 108

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V  NA+ +  LM  FC   ++  A   F  +  +G    V ++S L++G C    I  AL
Sbjct: 109 VPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEAL 168

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L+ +M     KP+VV + TL  GL    +V  A  L D M   G+  +   Y T +DG+
Sbjct: 169 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 224

Query: 281 CKNGYIVEAVELFRTLR--------ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-L 331
           CK G  V A+ L R +         ++ + L+ R   C+I+G C SGR   A +L +  L
Sbjct: 225 CKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERR--TCMINGFCSSGRWSEAQQLLQEML 282

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            R  +  DVVTYN +I+A   +GK  +A +L+ +M
Sbjct: 283 ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEM 317



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 90/222 (40%), Gaps = 39/222 (17%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +++A  L   M++    P+   +  LM      GR++    L   ME      N +S++I
Sbjct: 59  LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTI 118

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+  +C   ++  ALS + ++   G  P VV ++TL                        
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTL------------------------ 154

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
                      + GLC    I EA++LF  +     + ++  +  L++GLC+ GR+  A 
Sbjct: 155 -----------LHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAV 199

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L   +    L  + +TY  ++  +C  G    A +L   ME
Sbjct: 200 ALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME 241


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 133/354 (37%), Positives = 202/354 (57%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N +     +      A+++F +M            P+ V++  +ID LCK 
Sbjct: 331 GVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG------LSPDVVSFGALIDALCKL 384

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F +M +E + PN+  ++SL++G C    W +A+ LF E++DQG+  + V F
Sbjct: 385 GRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFF 444

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +M  LC  G++ EA RL++LMI++GVRPN   YNTL+ G CLTGR++ A +L   M S
Sbjct: 445 NTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS 504

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K N F+Y+IL+ GYCK + ++ A SL+ EML KG+ P V  YNT+  GLF+  +   
Sbjct: 505 NGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSE 564

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M       D + Y   ++GLCKN ++ EA ++FR L     +LD   +N +I 
Sbjct: 565 ANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIG 624

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR + A +LF ++    L+ DVVTY ++   L  +G + +   LF  ME
Sbjct: 625 ALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAME 678



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 190/358 (53%), Gaps = 6/358 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L +++  FGC P+V  YNT+ING  R G    A NLF EM +          PN VTYTT
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQG------IPPNVVTYTT 201

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDGLCK   VD+AK +F +M D  + P+  TYN LIHG+     W E   +  EM   G
Sbjct: 202 VIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHG 261

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++P+ +++ ++++ LCKNG+  EA    + M + G++P+  +Y  L+ G+   G ++   
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH 321

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
                M   G   N   ++I+   Y K   IE A+ ++++M  +G+ PDVV +  L   L
Sbjct: 322 SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            ++ +V+ A   F++M   GV  + + + + + GLC  G   +A ELF  +      +D 
Sbjct: 382 CKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDA 441

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             +N L+  LC  GR+  A  L   + R  +  +V++YN ++   C  G++D+A  L 
Sbjct: 442 VFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLL 499



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 136/437 (31%), Positives = 201/437 (45%), Gaps = 76/437 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   G +P+  TYN LI+G   TG     + + EEM+    E      P+ +
Sbjct: 214 RAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE------PDCI 267

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG----------------- 104
           TY  ++D LCK G   +A+  F  M  + I P+V  Y  L+HG                 
Sbjct: 268 TYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327

Query: 105 ---------------FC-YANDW--NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                          FC YA      EA  +F +M  QG+ P+VVSF  +++ LCK G++
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS---------------- 190
           D+A      MI  GV PN FV+++L+ G C  G+  +AEELF                  
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447

Query: 191 -------------------MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
                              M  +G + NV SY+ L+ G+C    I+ A  L   M+S G+
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KP+   Y  L  G  +  +V+ A+ LF EM   GV      Y T + GL + G   EA E
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L+  +   + + DI  YN +++GLCK+  +  A+++FR L       D VT+NIMI AL 
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 352 ADGKMDKARDLFLDMEA 368
             G+ + A DLF  + A
Sbjct: 628 KGGRKEDAMDLFATISA 644



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 178/355 (50%), Gaps = 15/355 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP----NTVTYTTIIDGLCK 72
           PN  TY+ LI   CR G           + +G   FG++ K     N +  + ++ GLC 
Sbjct: 88  PNACTYSILIGCFCRMGR----------LEHGFAAFGLILKTGWRVNVIVISQLLKGLCD 137

Query: 73  EGFVDKAKE-LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
              VD+A + L L+M +    P+VV YN++I+GF       +A  LF+EMMDQG+ PNVV
Sbjct: 138 AKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVV 197

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++  +++ LCK   +D A  + + MI  GV+P+   YN L+ G+  TG+     ++   M
Sbjct: 198 TYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEM 257

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            + G + +  +Y++L++  CKN     A   +  M  KGIKPDV IY  L  G      +
Sbjct: 258 STHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGAL 317

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
                  D M  +GV+ +   +        K   I EA+ +F  +R      D+ ++  L
Sbjct: 318 SEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGAL 377

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ID LCK GR+  A   F  +    +  ++  ++ +++ LC  GK +KA +LF ++
Sbjct: 378 IDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEV 432



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 183/358 (51%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+R  G  P+V ++  LI+ LC+ G    A+  F +M N     GV   PN  
Sbjct: 354 EAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINE----GVT--PNIF 407

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +++++ GLC  G  +KA+ELF ++ D+ I  + V +N+L+   C      EA+ L   M
Sbjct: 408 VFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLM 467

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+PNV+S+N ++   C  G++DEA++LL++M+  G++PN F Y  L+ G+C   RV
Sbjct: 468 IRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRV 527

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M   G    V +Y+ +++G  +      A  LY  M++   K D+  YN +
Sbjct: 528 DDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNII 587

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + + V+ AFK+F  +       D+  +   I  L K G   +A++LF T+     
Sbjct: 588 LNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGL 647

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D+  Y  + + L + G L     LF ++ +     +    N ++  L   G + +A
Sbjct: 648 VPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRA 705



 Score =  138 bits (347), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 174/397 (43%), Gaps = 52/397 (13%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIV--ALNLFEEMANGNGEFGVVCKPNTV-TYT 64
           M  RV            +I    R+G   +  AL LF+E+ +         +P +V  + 
Sbjct: 1   MSRRVSAAADRCLELERVIASRARSGSLGLDEALKLFDELLH-------CARPASVRAFN 53

Query: 65  TIIDGLCKEG---FVDKAKELFLKMKDE---NINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            ++  + + G     ++   LF +M  E    + PN  TY+ LI  FC           F
Sbjct: 54  QLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNACTYSILIGCFCRMGRLEHGFAAF 113

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL-MIQIGVRPNAFVYNTLMDGFCL 177
             ++  G + NV+  + ++  LC   ++DEA+ +L L M + G  P+   YNT+++GF  
Sbjct: 114 GLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFR 173

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+V +A  LF+ M   G   NV +Y+ +I+G CK + ++ A  ++ +M+ +G+KPD   
Sbjct: 174 EGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGT 233

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G     + +   ++ +EM  HG+  D   Y   +D LCKNG   EA   F ++ 
Sbjct: 234 YNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMF 293

Query: 298 ILKYELDIRAYNCLIDGLCKSGRL-----------------------------------K 322
               + D+  Y  L+ G    G L                                   +
Sbjct: 294 RKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIE 353

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            A  +F  + +  L  DVV++  +I ALC  G++D A
Sbjct: 354 EAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDA 390



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 129/261 (49%), Gaps = 8/261 (3%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG------VRPNA 165
           +EA  LF E++      +V +FN ++  + + G    + R++ L  ++       V PNA
Sbjct: 31  DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y+ L+  FC  GR+      F  +   G + NV   S L+ G C  K ++ A  +   
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 226 MLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            +S+ G  PDVV YNT+  G F   QVE+A+ LF EM   G+  +   Y T IDGLCK  
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +  A  +F+ +     + D   YNCLI G   +G+ K   ++   +    L  D +TY 
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 345 IMIHALCADGKMDKARDLFLD 365
           +++  LC +G+  +AR LF D
Sbjct: 271 LLLDYLCKNGRCREAR-LFFD 290



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 126/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L   +   G  PNV +YNTL+ G C TG    A  L + M + NG      KPN 
Sbjct: 458 MEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVS-NG-----LKPNE 511

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TYT ++ G CK   VD A  LF +M  + + P V TYN+++HG      ++EA  L++ 
Sbjct: 512 FTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLN 571

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   + ++ ++N+I+N LCKN  +DEA ++   +     + ++  +N ++      GR
Sbjct: 572 MINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGR 631

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   +V +Y ++     +   +     L+S M   G  P+  + N 
Sbjct: 632 KEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNA 691

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 692 LVRRLLHRGDISRA 705



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 108/221 (48%), Gaps = 6/221 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF ++ + G  P V TYNT+++GL +TG    A  L+  M N         K +  
Sbjct: 529 DAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSR------TKCDIY 582

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I++GLCK  FVD+A ++F ++  ++   + VT+N +I          +A  LF  +
Sbjct: 583 TYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATI 642

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+VV++ +I   L + G + E   L   M + G  PN+ + N L+      G +
Sbjct: 643 SAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDI 702

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           +RA      ++         + S+LI+ Y + +    A SL
Sbjct: 703 SRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEYQPHAKSL 743


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 133/354 (37%), Positives = 206/354 (58%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +  +Y TLINGLCR G T  A+ L   +       G + +PN V Y+TIID +CK+
Sbjct: 158 GFQLDQVSYGTLINGLCRVGETKAAVQLLRRVD------GKLVRPNVVMYSTIIDSMCKD 211

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V+ A +L+ +M  + I+P+VVTY+SLI GFC       A  LF  M+   + PNV +F
Sbjct: 212 KLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTF 271

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  CK GK+ EA  +L +M++  V+ +   YN+LMDG+CL  +VN+A+ LF  M  
Sbjct: 272 SILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQ 331

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V+SYSI+ING+CK K ++ A+ L+ EM  K I P+VV YN+L  GL +  +   
Sbjct: 332 RGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSC 391

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L DEM   G  ++   Y + +D +CKN ++ +A+ L   ++    + DI  Y  LI+
Sbjct: 392 ALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLIN 451

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GLCK GRL  A ++F  L       ++ TY  +I+  C  G  D+   +   M+
Sbjct: 452 GLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMK 505



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 202/367 (55%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++   G +P+  T N L+N   + GH   + ++F ++            P+ VT
Sbjct: 77  ALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYH------PDAVT 130

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T +I GLC +G V KA     K+  +    + V+Y +LI+G C   +   A  L   + 
Sbjct: 131 FTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVD 190

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V+PNVV ++ I++ +CK+  +++A  L   M+   + P+   Y++L+ GFC+ G++ 
Sbjct: 191 GKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLK 250

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +LF  M S     NV+++SILI+G+CK  ++  A ++ + M+ K +K DVV YN+L 
Sbjct: 251 YAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLM 310

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + QV +A  LF+ M + GV  D W+Y   I+G CK   + EA++LF  +   +  
Sbjct: 311 DGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIF 370

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  YN L+DGLCKSGR   A EL   +      ++++TYN ++ A+C +  +DKA  L
Sbjct: 371 PNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVL 430

Query: 363 FLDMEAK 369
              ++ K
Sbjct: 431 LTKIKEK 437



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 200/371 (53%), Gaps = 14/371 (3%)

Query: 4   AALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           AA+ +  RV G    PNV  Y+T+I+ +C+      A +L+ EM +          P+ V
Sbjct: 181 AAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR------ISPDVV 234

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I G C  G +  A +LF +M  +NINPNV T++ LI GFC      EAK +   M
Sbjct: 235 TYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVM 294

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M + V+ +VV++N +M+  C   ++++A  L  +M Q GV P+ + Y+ +++GFC    V
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354

Query: 182 NRAEELFVSMESMGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           + A +LF   E M CK    NV +Y+ L++G CK+     AL L  EM  +G   +++ Y
Sbjct: 355 DEAMKLF---EEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITY 411

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++   + + + V++A  L  +++  G+  D + Y   I+GLCK G + +A ++F  L +
Sbjct: 412 NSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLV 471

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             Y  +I  Y  LI+G C  G       +   +     I + +TY I+IH+L    + DK
Sbjct: 472 KGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDK 531

Query: 359 ARDLFLDMEAK 369
           A  L  +M A+
Sbjct: 532 AEKLLREMIAR 542



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++F K+   G  P+  T+  LI GLC  G    AL   +++     +       + V+Y 
Sbjct: 114 SVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQL------DQVSYG 167

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+GLC+ G    A +L  ++  + + PNVV Y+++I   C     N+A  L+ EM+ +
Sbjct: 168 TLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSK 227

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P+VV+++ +++  C  GK+  A  L   MI   + PN + ++ L+DGFC  G+V  A
Sbjct: 228 RISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREA 287

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + +   M     K +V +Y+ L++GYC  K++  A SL++ M  +G+ PDV  Y+ +  G
Sbjct: 288 KNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMING 347

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +I  V+ A KLF+EM    +  +   Y + +DGLCK+G    A+EL   +       +
Sbjct: 348 FCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSN 407

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  YN ++D +CK+  +  A  L   +    +  D+ TY ++I+ LC  G++D A+ +F 
Sbjct: 408 IITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFE 467

Query: 365 DMEAK 369
           D+  K
Sbjct: 468 DLLVK 472



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 145/249 (58%), Gaps = 6/249 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V TYN+L++G C       A +LF  MA    + GV   P+  +Y+ +I+G CK   VD
Sbjct: 302 DVVTYNSLMDGYCLVKQVNKAKSLFNVMA----QRGVT--PDVWSYSIMINGFCKIKMVD 355

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A +LF +M  + I PNVVTYNSL+ G C +   + A  L  EM D+G   N++++N I+
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + +CKN  +D+A  LL  + + G++P+ F Y  L++G C  GR++ A+++F  +   G  
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N+++Y+ LING+C     +  L++ S+M   G  P+ + Y  L   LFE  + ++A KL
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKL 535

Query: 258 FDEMQRHGV 266
             EM   G+
Sbjct: 536 LREMIARGL 544



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 157/312 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+  L K      A  L  +M+   I P+ +T N L++ F        +  +
Sbjct: 56  PPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSV 115

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +++ +G  P+ V+F +++  LC  G++ +A    + ++  G + +   Y TL++G C 
Sbjct: 116 FAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCR 175

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +L   ++    + NV  YS +I+  CK+K +  A  LY EM+SK I PDVV 
Sbjct: 176 VGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVT 235

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y++L  G   + +++ A  LF+ M    +  + + +   IDG CK G + EA  +   + 
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +LD+  YN L+DG C   ++  A  LF  + +  +  DV +Y+IMI+  C    +D
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355

Query: 358 KARDLFLDMEAK 369
           +A  LF +M  K
Sbjct: 356 EAMKLFEEMHCK 367



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 79/233 (33%), Positives = 132/233 (56%), Gaps = 12/233 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---P 58
           +A +LF  +   G  P+V++Y+ +ING C+      A+ LFEEM          CK   P
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH---------CKQIFP 371

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N VTY +++DGLCK G    A EL  +M D     N++TYNS++   C  N  ++A  L 
Sbjct: 372 NVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLL 431

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            ++ ++G+QP++ ++ V++N LCK G++D+A ++ E ++  G  PN + Y +L++GFC  
Sbjct: 432 TKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNK 491

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           G  +    +   M+  GC  N  +Y ILI+   +  E + A  L  EM+++G+
Sbjct: 492 GFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 128/341 (37%), Positives = 198/341 (58%), Gaps = 6/341 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + ++ LI    + G    A+ +F +M            P+TVTY T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIH  C  + W++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L +LM++IGV+PN   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +   Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L K GR   A +LF +L    L+ DV TY++M   L   G
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 208/434 (47%), Gaps = 74/434 (17%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++   GC PNVF+YN L+ GLC    +  AL L + M +  G+    C P+ V+YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI----------------------- 102
           +I+G  KEG +DKA   + +M D  I PNVVTYNS+I                       
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 103 ------------HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                       HG+C +    EA     +M   GV+P+VV++N +M+ LCKNG+  EA 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           ++ + M + G++P    Y TL+ G+   G +     L   M   G   N + +SILI  Y
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD----------- 259
            K  +++ A+ ++S+M  +G+ PD V Y T+   L +  +VE A + F+           
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 260 ------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
                                   EM   G+  DT  + + ID  CK G ++E+ +LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + +I  Y+ LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 505 MVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 356 MDKARDLFLDMEAK 369
           M+ A  LF +ME+ 
Sbjct: 565 MEDALVLFREMESS 578



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 204/396 (51%), Gaps = 29/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA     K+   G EP+V TYN+L++ LC+ G    A  +F+ M                
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 47  NGNGEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G    G + +              PN   ++ +I    K+G VD+A  +F KM+ + +N
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ VTY ++I   C +    +A   F +M+D+ + P  + +N +++ LC   K D+A  L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M+  G+  +   +N+++D  C  GRV  +E+LF  M  +G K N+ +YS LI+GYC 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCL 526

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A  L + M+S G+KPD V YNTL  G  +I ++E A  LF EM+  GV+ D   
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GL +      A EL+  +     +L++  YN ++ GLCK+     A  +F++L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              L  +  T+NIMI AL   G+ D+A+DLF  + A
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 166/371 (44%), Gaps = 7/371 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G   +++  N  +  + R      A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I   C  G +D        +  +    + + +  L+ G C     ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDGFCLT 178
           M Q G  PNV S+N+++  LC   +  EA  LL++M   G    P+   Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +++A   +  M   G   NV +Y+ +I   CK + ++ A+ + + M+  G+ P+   Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++  G     Q + A     +M   GV  D   Y + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +I  Y  L+ G    G L     L   + R  +  +   ++I+I A    GK+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 359 ARDLFLDMEAK 369
           A  +F  M  +
Sbjct: 393 AMLVFSKMRQQ 403



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +PN+ TY+TLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 496 IESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LF ++ + G   +V +YS++     +   +E    L+  M   G   +  + N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L++ +   G +  + TYN +++GLC+   T  AL +F+ +   + +        T T
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRT 656

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I  L K G  D+AK+LF  +    + P+V TY+ +           E   LF+ M 
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + G   N    N I+ +L + G +  A   L
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYL 747


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  251 bits (641), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 133/354 (37%), Positives = 204/354 (57%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +NT+I    +       +++F +M            PN VTY T+ID LCK 
Sbjct: 500 GISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG------LSPNVVTYGTLIDALCKL 553

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F +M +E + PN V +NSL++G C  + W + + LF+EM++QG++P++V F
Sbjct: 554 GRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LCK G++ EA RL++ M+ +G++P+   YNTL+DG C   R++ A +L   M S
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K N+ SY+ L++GYCK   I+ A  L+ EML KG+ P V  YNT+  GLF   +   
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M +         Y   +DG CKN    EA ++F++L  +  +LDI  +N +ID
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMID 793

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GL K GR + A +LF ++P   L+  VVTY ++   L  +G +++   LF  ME
Sbjct: 794 GLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVME 847



 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 195/358 (54%), Gaps = 6/358 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC   V +YNTL+ GLC       A  L   M +G       C P+ V+Y  
Sbjct: 142 LLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDS---SCSPDVVSYNI 198

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G   EG VDKA  LFL+M    ++P+VVTYN++I G C A + + A+ +F +M+++G
Sbjct: 199 VINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+PN V++N I++ LCK  ++D A  + + M+  GV+P+   YNT++DG C    V+RAE
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +F  M   G K +  +Y+ +I+G CK + I+ A  ++ +M+ KG+KPD + Y  +  GL
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   V+RA  +F +M   GV  +   Y   I G    G   E V+  + +     E D+
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDV 435

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y  L+D LCK+G+   A  LF S+ R  +   V  Y IM+H     G + +  DL 
Sbjct: 436 FTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLL 493



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 213/403 (52%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   G +P+  TYNT+I+GLC+      A  +F++M +     GV  KP+ +
Sbjct: 313 RAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK----GV--KPDNL 366

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT IIDGLCK   VD+A+ +F +M D+ + PN  TYN LIHG+     W E      EM
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++P+V ++ ++++ LCKNGK +EA  L + MI+ G++P+  +Y  ++ G+   G +
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486

Query: 182 NRAEEL-----------------------------------FVSMESMGCKHNVFSYSIL 206
           +   +L                                   F+ M+  G   NV +Y  L
Sbjct: 487 SEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL 546

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+  CK   ++ A+  +++M+++G+ P+ V++N+L  GL  + + E+  +LF EM   G+
Sbjct: 547 IDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGI 606

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   + T +  LCK G ++EA  L  ++  +  + D+ +YN LIDG C + R+  A +
Sbjct: 607 RPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVK 666

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   +    L  ++V+YN ++H  C  G++D A  LF +M  K
Sbjct: 667 LLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRK 709



 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/400 (33%), Positives = 208/400 (52%), Gaps = 44/400 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF+++   G  P+V TYNT+I+GLC+      A ++F++M     E GV  KPN V
Sbjct: 211 KAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMV----EKGV--KPNNV 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TIIDGLCK   VD A+ +F KM D+ + P+ VTYN++I G C A   + A+ +F +M
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV+P+ V++N I++ LCK   +D+A  + + MI  GV+P+   Y  ++DG C    V
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGY------------------------------- 210
           +RAE +F  M   G K N  +Y+ LI+GY                               
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 211 ----CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
               CKN +   A SL+  M+ KGIKP V IY  +  G  +   +     L + M  +G+
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + +   + T I    K   I E + +F  ++      ++  Y  LID LCK GR+  A  
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            F  +    +  + V +N +++ LC   K +K  +LFL+M
Sbjct: 562 QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601



 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/355 (33%), Positives = 193/355 (54%), Gaps = 9/355 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V +YN +ING    G    A +LF EM            P+ VTY TIIDGLCK  
Sbjct: 189 CSPDVVSYNIVINGFFNEGQVDKAYSLFLEMG---------VSPDVVTYNTIIDGLCKAQ 239

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD+A+++F +M ++ + PN VTYN++I G C A + + A+ +F +M+D+GV+P+ V++N
Sbjct: 240 EVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYN 299

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            I++ LCK   +D A  + + MI  GV+P+   YNT++DG C    +++AE +F  M   
Sbjct: 300 TIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDK 359

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G K +  +Y+I+I+G CK + ++ A  ++ +M+ KG+KP+   YN L  G     Q E  
Sbjct: 360 GVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEV 419

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +   EM  H +  D + Y   +D LCKNG   EA  LF ++     +  +  Y  ++ G
Sbjct: 420 VQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHG 479

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             K G L    +L   +    +  +   +N +I A      +D+   +F+ M+ +
Sbjct: 480 YGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQ 534



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/382 (33%), Positives = 201/382 (52%), Gaps = 29/382 (7%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFGVVCK--- 57
           EP+VFTY  L++ LC+ G    A +LF+ M                +G G+ G + +   
Sbjct: 432 EPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHD 491

Query: 58  -----------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 106
                      PN   + T+I    K   +D+   +F+KMK + ++PNVVTY +LI   C
Sbjct: 492 LLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALC 551

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
                ++A   F +M+++GV PN V FN ++  LC   K ++   L   M+  G+RP+  
Sbjct: 552 KLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIV 611

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            +NT++   C  GRV  A  L  SM  MG K +V SY+ LI+G+C    ++ A+ L   M
Sbjct: 612 FFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGM 671

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           +S G+KP++V YNTL  G  +  +++ A+ LF EM R GV      Y T ++GL ++G  
Sbjct: 672 VSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRF 731

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA EL+  +   +    I  Y+ ++DG CK+     A+++F+SL    L  D++T+NIM
Sbjct: 732 SEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIM 791

Query: 347 IHALCADGKMDKARDLFLDMEA 368
           I  L   G+ + A DLF  + A
Sbjct: 792 IDGLFKGGRKEDAMDLFAAIPA 813



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 194/348 (55%), Gaps = 13/348 (3%)

Query: 23  NTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           N L+ GLC T     A++ L  +M        V C+   V+Y T++ GLC     ++A+E
Sbjct: 123 NQLLKGLCDTKRVGEAMHVLLRQMPE------VGCRLGVVSYNTLLKGLCDRRRAEEARE 176

Query: 82  LFLKM---KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           L   M   +D + +P+VV+YN +I+GF      ++A  LF+EM   GV P+VV++N I++
Sbjct: 177 LLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIID 233

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LCK  ++D A  + + M++ GV+PN   YNT++DG C    V+ AE +F  M   G K 
Sbjct: 234 GLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKP 293

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +  +Y+ +I+G CK + ++ A  ++ +M+ +G+KPD V YNT+  GL +   +++A  +F
Sbjct: 294 SNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVF 353

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            +M   GV  D   Y   IDGLCK   +  A  +F+ +     + +   YNCLI G   +
Sbjct: 354 QQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLST 413

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G+ +   +  + +    L  DV TY +++  LC +GK ++AR LF  M
Sbjct: 414 GQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSM 461



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 160/310 (51%), Gaps = 12/310 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---KPNTVT 62
           LF+++   G  P++  +NT++  LC+ G  + A  L + M         VC   KP+ ++
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSM---------VCMGLKPDVIS 647

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C    +D+A +L   M    + PN+V+YN+L+HG+C A   + A CLF EM+
Sbjct: 648 YNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREML 707

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV P V ++N I+N L ++G+  EA  L   MI+     +   Y+ ++DGFC     +
Sbjct: 708 RKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFD 767

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F S+ SM  + ++ +++I+I+G  K    E A+ L++ + + G+ P VV Y  + 
Sbjct: 768 EAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIA 827

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L E   +E    LF  M++ G A ++      I  L   G I  A      L    + 
Sbjct: 828 ENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFS 887

Query: 303 LDIRAYNCLI 312
           L+    + LI
Sbjct: 888 LEASTTSMLI 897



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 6/297 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L   +   G +P+V +YNTLI+G C       A+ L + M +         KPN 
Sbjct: 627 MEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAG------LKPNI 680

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T++ G CK G +D A  LF +M  + + P V TYN++++G   +  ++EA+ L++ 
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVN 740

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+      ++ ++++I++  CKN   DEA ++ + +  + ++ +   +N ++DG    GR
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   +V +Y ++     +   +E    L+S M   G  P+  + N 
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNA 860

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           L   L +  ++ RA     ++     + +       I    +  Y   A  L    R
Sbjct: 861 LIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSREEYQQHAKSLPEKCR 917



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 119/268 (44%), Gaps = 13/268 (4%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFN----VIMNELCKNGKMDEASRLLELMIQIG--VRPNA 165
           ++A  LF E++      +V + N    V+    C +      SR   ++      V P+ 
Sbjct: 25  HDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDC 84

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS-LYS 224
             Y+ ++  FC  GR+      F  +   G + +    + L+ G C  K +  A+  L  
Sbjct: 85  CTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLR 144

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM---QRHGVAADTWAYRTFIDGLC 281
           +M   G +  VV YNTL  GL +  + E A +L   M   Q    + D  +Y   I+G  
Sbjct: 145 QMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFF 204

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
             G + +A  LF  + +     D+  YN +IDGLCK+  +  A ++F+ +    +  + V
Sbjct: 205 NEGQVDKAYSLFLEMGV---SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNV 261

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
           TYN +I  LC   ++D A  +F  M  K
Sbjct: 262 TYNTIIDGLCKAQEVDMAEGVFQKMVDK 289


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 127/320 (39%), Positives = 196/320 (61%), Gaps = 6/320 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A   F ++   G +PN+ TYNT+I G C+ G T VA+ L ++M    G      +P+ V
Sbjct: 172 RAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGG------RPDIV 225

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIIDGLCK+  V +A ++F ++K + + P+V TY+ L+HG C ++   EA  LF EM
Sbjct: 226 IYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEM 285

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M   + P+VV+FN+++++LCK G + EA  ++++MI+ GV PN   YN+LM+G+CL  +V
Sbjct: 286 MSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKV 345

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F +M + GC  NV SY+ILINGYCK + I+ A  L+ EM  +G+ P+   YNTL
Sbjct: 346 FEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTL 405

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +   A +LF +MQ  G + D       +D LCK GY+  A+ LFR ++    
Sbjct: 406 ISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCL 465

Query: 302 ELDIRAYNCLIDGLCKSGRL 321
           + ++  Y+ LI  + KSG++
Sbjct: 466 KPNLVTYDILIRAMYKSGKI 485



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 184/363 (50%), Gaps = 6/363 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L  ++ +   E +VF +N LIN   R      A ++  ++     E      P+ VT++
Sbjct: 105 SLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFE------PDAVTFS 158

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++I+GLC E    +A E F +M      PN+ TYN++I GFC       A  L  +M   
Sbjct: 159 SLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKA 218

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P++V +N I++ LCK+  + EA  +   +   GVRP+ F Y+ LM G C + +   A
Sbjct: 219 GGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEA 278

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  M S+    +V +++IL++  CK   +  A  +   M+ KG++P+   YN+L  G
Sbjct: 279 SALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNG 338

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
               ++V  A  +FD M   G   +  +Y   I+G CK   I EA ELF  +       +
Sbjct: 339 YCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPN 398

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              YN LI GLC++GR   A ELF+ +       D+VT  I++ +LC  G +D A  LF 
Sbjct: 399 TFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFR 458

Query: 365 DME 367
            M+
Sbjct: 459 AMQ 461



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 185/353 (52%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  ++ L++ L R  H    L+L + +     E  V        +  +I+   +   V
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVF------HFNILINCFSRLQRV 135

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A  +  K+      P+ VT++SLI+G C+ + +  A   F EM+  G QPN+ ++N I
Sbjct: 136 DFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTI 195

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   CK GK   A  LL+ M + G RP+  +YNT++DG C    V+ A ++F  ++  G 
Sbjct: 196 IKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGV 255

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +VF+YSIL++G C + + E A +L++EM+S  I PDVV +N L   L +   +  A  
Sbjct: 256 RPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQG 315

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +   M   GV  +   Y + ++G C    + EA  +F  +       ++ +YN LI+G C
Sbjct: 316 IIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYC 375

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K+ R+  A ELF  +    LI +   YN +I  LC  G+  +AR+LF DM+A+
Sbjct: 376 KAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQ 428



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 92/252 (36%), Positives = 149/252 (59%), Gaps = 6/252 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +++  G  P+VFTY+ L++GLC +     A  LF EM + N        P+ V
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN------IMPDVV 295

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D LCKEG + +A+ +   M ++ + PN  TYNSL++G+C  N   EA+ +F  M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNVVS+N+++N  CK  ++DEA  L + M   G+ PN F YNTL+ G C  GR 
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ELF  M++ GC  ++ + +IL++  CK   ++ AL L+  M    +KP++V Y+ L
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475

Query: 242 FIGLFEIHQVER 253
              +++  ++ R
Sbjct: 476 IRAMYKSGKIYR 487



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 160/327 (48%), Gaps = 8/327 (2%)

Query: 51  EFGVVCKPNTVTYTTIIDGLCKEGF--------VDKAKELFLKMKDENINPNVVTYNSLI 102
           E G++C  +T T +    G  ++ +        ++ A   F  M  ++  P +V ++ L+
Sbjct: 32  EKGMICCLHTSTISRSRSGSGRQKYQKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLL 91

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
                   +     L   +    ++ +V  FN+++N   +  ++D A  +L  +I++G  
Sbjct: 92  SALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFE 151

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+A  +++L++G C   +  RA E F  M + G + N+ +Y+ +I G+CK  +   A+ L
Sbjct: 152 PDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGL 211

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             +M   G +PD+VIYNT+  GL +   V  A  +F E++  GV  D + Y   + GLC 
Sbjct: 212 LKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCN 271

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +    EA  LF  +  L    D+  +N L+D LCK G L  A  + + +    +  +  T
Sbjct: 272 SDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYAT 331

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           YN +++  C   K+ +AR +F  M  K
Sbjct: 332 YNSLMNGYCLQNKVFEARMVFDAMITK 358


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  250 bits (639), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 132/347 (38%), Positives = 202/347 (58%), Gaps = 6/347 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           +Y TLINGLC+ G    AL L + +       G + +PN V Y  IID +CK   V+ A 
Sbjct: 168 SYGTLINGLCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKAKLVNDAF 221

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L+ +M  + I P+V TYN+LI GF   +  N A  LF +M  + + PNV +FN++++  
Sbjct: 222 DLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGF 281

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK GK+++A  +L +M++  ++P+   YN+LMDG+C   +VN+A+++F SM S G   NV
Sbjct: 282 CKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANV 341

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
             Y+ ++NG+CK K ++ A++L+ EM  + I P+VV Y++L  GL ++ ++  A KL DE
Sbjct: 342 QIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDE 401

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G   +   Y + +D LCKN ++ +A+ L   L+      D+  Y  LI GLC+SGR
Sbjct: 402 MHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGR 461

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L+ A  +F  L       DV  Y +MI   C  G  DKA  L   ME
Sbjct: 462 LEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKME 508



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 188/366 (51%), Gaps = 8/366 (2%)

Query: 3   AAALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            AAL +  RV G   +PN   YN +I+ +C+      A +L+ +M         +C P+ 
Sbjct: 183 TAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR-----IC-PDV 236

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I G      ++ A +LF KMK ENINPNV T+N L+ GFC     N+AK +   
Sbjct: 237 FTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAI 296

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM   ++P+VV++N +M+  C   K+++A  + + M   GV  N  +Y T+++GFC    
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  LF  M       NV +YS LI+G CK   I  AL L  EM  +G  P++V Y++
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L + H V++A  L   ++  G+  D + Y   I GLC++G + +A  +F  L +  
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y LD+ AY  +I G C  G    A  L   +     I +  TY ++I +L    + D A 
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAE 536

Query: 361 DLFLDM 366
            L  +M
Sbjct: 537 KLLREM 542



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 193/387 (49%), Gaps = 43/387 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P  F +N +++ L +  H   AL+L ++M  NG        + +  T+  +I+   + G 
Sbjct: 59  PPTFQFNKILSSLVKAKHHSTALSLHQQMELNG-------IESDFFTFNILINCFSQLGL 111

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG---------- 125
              +  +F K+  +  +P  +T+N+LI G C     ++A     +++ QG          
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 126 -------------------------VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
                                    VQPN V +N+I++ +CK   +++A  L   M+   
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + P+ F YN L+ GF    ++N A +LF  M+      NV++++IL++G+CK  ++  A 
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            + + M+   IKPDVV YN+L  G   I++V +A  +FD M   GV A+   Y T ++G 
Sbjct: 292 VVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGF 351

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK   + EA+ LF  +R  K   ++  Y+ LIDGLCK GR+  A +L   +       ++
Sbjct: 352 CKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNI 411

Query: 341 VTYNIMIHALCADGKMDKARDLFLDME 367
           VTY+ ++ ALC +  +DKA  L  +++
Sbjct: 412 VTYSSILDALCKNHHVDKAIALLTNLK 438



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 144/251 (57%), Gaps = 6/251 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V TYN+L++G C       A ++F+ MA+G    GV+   N   YTT+++G CK   
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASG----GVIA--NVQIYTTMVNGFCKIKM 356

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD+A  LF +M+   I PNVVTY+SLI G C       A  L  EM D+G  PN+V+++ 
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I++ LCKN  +D+A  LL  +   G+RP+ + Y  L+ G C +GR+  A+ +F  +   G
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +V++Y+++I G+C     + AL+L S+M   G  P+   Y  + + LFE  + + A 
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAE 536

Query: 256 KLFDEMQRHGV 266
           KL  EM   G+
Sbjct: 537 KLLREMIVRGL 547



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 127/233 (54%), Gaps = 12/233 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---P 58
           +A  +F  +   G   NV  Y T++NG C+      A+NLFEEM          C+   P
Sbjct: 324 KAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMR---------CRKIIP 374

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N VTY+++IDGLCK G +  A +L  +M D    PN+VTY+S++   C  +  ++A  L 
Sbjct: 375 NVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALL 434

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             + DQG++P++ ++ +++  LC++G++++A  + E ++  G   + + Y  ++ GFC  
Sbjct: 435 TNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDK 494

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           G  ++A  L   ME  GC  N  +Y ++I    +  E + A  L  EM+ +G+
Sbjct: 495 GFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 136/280 (48%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           +N  P    +N ++     A   + A  L  +M   G++ +  +FN+++N   + G    
Sbjct: 55  KNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSL 114

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           +  +   +++ G  P A  +NTL+ G CL G +++A      + + G   +  SY  LIN
Sbjct: 115 SFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLIN 174

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G CK   I  AL L   +  K ++P+ V+YN +   + +   V  AF L+ +M    +  
Sbjct: 175 GLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICP 234

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           D + Y   I G      +  A++LF  ++      ++  +N L+DG CK G++  A  + 
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             + +  +  DVVTYN ++   C+  K++KA+D+F  M +
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMAS 334



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 112/240 (46%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +   P    FN I++ L K      A  L + M   G+  + F +N L++ F   G 
Sbjct: 52  LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + +  +F  +   G      +++ LI G C    I  AL  + +++++G   D V Y T
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++ ++  A +L   +    V  +   Y   ID +CK   + +A +L+  +   +
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+  YN LI G     +L  A +LF  + +  +  +V T+NI++   C +GK++ A+
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 85/170 (50%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
            F ++ +++   K K    ALSL+ +M   GI+ D   +N L     ++     +F +F 
Sbjct: 61  TFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFA 120

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           ++ + G       + T I GLC  G+I +A+     +    + LD  +Y  LI+GLCK G
Sbjct: 121 KILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVG 180

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R+  A +L + +   ++  + V YN++I  +C    ++ A DL+  M AK
Sbjct: 181 RITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAK 230


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  250 bits (639), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 206/366 (56%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     K+   G   +  +Y TLINGLC+ G T  AL L           G + +P+ V
Sbjct: 281 QALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRND------GKLVQPDVV 334

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIIDG+CK+  V+ A +L+ +   + I P+V TYN+LI GFC      +A  LF +M
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKM 394

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+V +F+++++  CK+G + EA  +L +M++  ++P+   Y++LMDG+CL   V
Sbjct: 395 TSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEV 454

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+AE +F +M   G   NV SY+I+ING+CK K ++ A+ L+ EM  K I PDV+ Y++L
Sbjct: 455 NKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSL 514

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++  A +L DEM   G   D   Y + +D LCK  ++ +A+ L   L+    
Sbjct: 515 IDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGI 574

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  Y  L+ GLC+SG+L+ A ++F  L       DV  Y +MI   C  G  D+A  
Sbjct: 575 RPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALA 634

Query: 362 LFLDME 367
           L   ME
Sbjct: 635 LLSKME 640



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 183/356 (51%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  T  T I G C  G    AL+  +++             + V+Y T+I+GLCK 
Sbjct: 258 GYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHL------DQVSYGTLINGLCKV 311

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A EL  +   + + P+VV YN++I G C     N+A  L+ E + + + P+V ++
Sbjct: 312 GETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTY 371

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C  GK+ +A  L   M    + P+ + ++ L+DGFC  G +  A+ +   M  
Sbjct: 372 NALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMK 431

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              K +V +YS L++GYC   E+  A S+++ M  +G+  +V  YN +  G  +I  V+ 
Sbjct: 432 QSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDE 491

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KLF EM    +  D   Y + IDGLCK+G I  A+EL   +     + DI  YN ++D
Sbjct: 492 AMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILD 551

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LCK   +  A  L   L    +  D+ TY I++  LC  GK++ AR +F D+  K
Sbjct: 552 ALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVK 607



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 151/279 (54%), Gaps = 6/279 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+      P+V+T++ L++G C+ G+   A N+   M   +       KP+ V
Sbjct: 386 DAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQS------IKPDVV 439

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++DG C    V+KA+ +F  M    +  NV +YN +I+GFC     +EA  LF EM
Sbjct: 440 TYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEM 499

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+V++++ +++ LCK+G++  A  L++ M   G +P+   YN+++D  C    V
Sbjct: 500 HHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHV 559

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  L   ++  G + ++ +Y+IL+ G C++ ++E A  ++ ++L KG   DV  Y  +
Sbjct: 560 DKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVM 619

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             G  +    + A  L  +M+ +G   D   Y   I  L
Sbjct: 620 IQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658



 Score =  150 bits (380), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 146/262 (55%), Gaps = 9/262 (3%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A+ MK  +   +P+V TY++L++G C       A ++F  M++     GV    N  +Y 
Sbjct: 427 AMMMKQSI---KPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHR----GVT--ANVQSYN 477

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I+G CK   VD+A +LF +M  + I P+V+TY+SLI G C +   + A  L  EM  +
Sbjct: 478 IMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYR 537

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP+++++N I++ LCK   +D+A  LL  +   G+RP+   Y  L+ G C +G++  A
Sbjct: 538 GQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDA 597

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ++F  +   G   +V++Y+++I G+C     + AL+L S+M   G  PD   Y  + + 
Sbjct: 598 RKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILS 657

Query: 245 LFEIHQVERAFKLFDEMQRHGV 266
           LFE  + + A KL  EM   G+
Sbjct: 658 LFEKDENDMAEKLLREMIMRGL 679



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 73/250 (29%), Positives = 127/250 (50%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +++  G +P+ ++    +   C  G++ +A    + +I +G   +   Y TL++G C  G
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
               A EL    +    + +V  Y+ +I+G CK+K +  A  LYSE +SK I PDV  YN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G   + +++ A  LF++M    +  D + +   +DG CK+G I EA  +   +   
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+  Y+ L+DG C    +  A  +F ++    + A+V +YNIMI+  C    +D+A
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492

Query: 360 RDLFLDMEAK 369
             LF +M  K
Sbjct: 493 MKLFKEMHHK 502



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 126/230 (54%), Gaps = 6/230 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F  +   G   NV +YN +ING C+      A+ LF+EM +          P+ +
Sbjct: 456 KAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ------IFPDVI 509

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++IDGLCK G +  A EL  +M      P+++TYNS++   C  +  ++A  L  ++
Sbjct: 510 TYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKL 569

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG++P++ ++ +++  LC++GK+++A ++ E ++  G   + + Y  ++ GFC  G  
Sbjct: 570 KGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLF 629

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + A  L   ME  GC  +  +Y I+I    +  E + A  L  EM+ +G+
Sbjct: 630 DEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 199/354 (56%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + YN LI    + G    A+ +F +M            P+ VTY  +I  LCK 
Sbjct: 336 GIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQG------LNPDAVTYGAVIGILCKS 389

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIHG C  N W  A+ L +EM+D+G+  N + F
Sbjct: 390 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 449

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L   M S
Sbjct: 450 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS 509

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K N  +Y  LINGYCK   +  AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 510 VGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 569

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +   Y   + GLCKN    +A+ +F+ L ++  +L+ R +N +ID
Sbjct: 570 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 629

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR   A +LF +     L+ +  TY +M   +   G +++   LFL ME
Sbjct: 630 ALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 683



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 197/404 (48%), Gaps = 43/404 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++    C P+VF+   L+ GLC    +  AL L   MA+G G       P+ V+YTT
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSA---PDVVSYTT 201

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G  KEG   KA   + +M D  I+P+VVTY+S+I   C     ++A  +   M+  G
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 126 VQPNVVSFNVIMNELCKNGKMDEA------------------------------------ 149
           V PN  ++  IM+  C +G+  EA                                    
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 150 ----SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                 LL+LM++ G+ P+ +VYN L+  +   G+V+ A  +F  M   G   +  +Y  
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGA 381

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I   CK+  +E A+  + +M+ +G+ P  ++YN+L  GL   ++ ERA +L  EM   G
Sbjct: 382 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 441

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +T  + + ID  CK G ++E+ +LF  +  +  + DI  Y+ LIDG C +G++  A 
Sbjct: 442 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAM 501

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +L   +    L  + VTY  +I+  C   +M  A  LF +ME+ 
Sbjct: 502 KLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESS 545



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 184/354 (51%), Gaps = 3/354 (0%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  PN  TY ++++G C +G    A+   +++ ++G    G+  +P+  TY T++ G   
Sbjct: 261 GVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGL--EPDIATYCTLLQGYAT 318

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +G +     L   M    I+P+   YN LI  +      +EA  +F +M  QG+ P+ V+
Sbjct: 319 KGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVT 378

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++  LCK+G++++A    E MI  G+ P   VYN+L+ G C   +  RAEEL + M 
Sbjct: 379 YGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEML 438

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   N   ++ +I+ +CK   +  +  L+  M+  G+KPD++ Y+TL  G     +++
Sbjct: 439 DRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMD 498

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A KL   M   G+  +T  YRT I+G CK   + +A+ LF+ +       DI  YN ++
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GL ++ R   A EL+  +       ++ TYNI++H LC +   D A  +F ++
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNL 612



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 169/352 (48%), Gaps = 29/352 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  +F K+R  G  P+  TY  +I  LC++G    A+  FE+M +     G +      
Sbjct: 359 EAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 418

Query: 56  -----CKP------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                C                    NT+ + +IID  CKEG V ++++LF  M    + 
Sbjct: 419 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 478

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+++TY++LI G+C A   +EA  L   M+  G++PN V++  ++N  CK  +M +A  L
Sbjct: 479 PDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVL 538

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M   GV P+   YN ++ G   T R   A+EL+V +   G +  + +Y+I+++G CK
Sbjct: 539 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 598

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           NK  + AL ++  +    +K +   +N +   L ++ +   A  LF     +G+  + W 
Sbjct: 599 NKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWT 658

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           YR   + +   G + E  +LF ++      +D    N ++  L + G +  A
Sbjct: 659 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 710



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 138/285 (48%), Gaps = 6/285 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TY+TLI+G C  G    A+ L   M +      V  KPNT
Sbjct: 463 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS------VGLKPNT 516

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   +  A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 517 VTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 576

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   D+A R+ + +  + ++  A  +N ++D     GR
Sbjct: 577 ITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 636

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A++LFV+  S G   N ++Y ++         +E    L+  M   G   D  + N 
Sbjct: 637 NGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 696

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 697 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 741



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 145/315 (46%), Gaps = 10/315 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N   +N++I+  C+ G  I +  LF+ M       GV  KP+ +TY+T+IDG C  G +D
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIITYSTLIDGYCLAGKMD 498

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A +L   M    + PN VTY +LI+G+C  +   +A  LF EM   GV P+++++N+I+
Sbjct: 499 EAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIIL 558

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             L +  +   A  L   + + G +     YN ++ G C     + A  +F ++  M  K
Sbjct: 559 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLK 618

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
               +++I+I+   K      A  L+    S G+ P+   Y  +   +     +E   +L
Sbjct: 619 LEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 678

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M+ +G   D+      +  L + G I  A      +    + L+    +  ID L  
Sbjct: 679 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 737

Query: 318 SGRLKIAWELFRSLP 332
            G+ +   E  R LP
Sbjct: 738 GGKYQ---EYHRFLP 749



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/410 (22%), Positives = 165/410 (40%), Gaps = 50/410 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNT 60
           +A  +F +L   G   +++  N  +  + R      A++ +  MA  G G+      P  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKV----TPTV 87

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I   C+   +D        +  +      +T+  L+ G C     ++A  + + 
Sbjct: 88  HTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR 147

Query: 121 MMDQ---------------------------------------GVQPNVVSFNVIMNELC 141
            M +                                       G  P+VVS+  ++N   
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFF 207

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G   +A      M+   + P+   Y++++   C    +++A E+  SM   G   N  
Sbjct: 208 KEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCR 267

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGI-----KPDVVIYNTLFIGLFEIHQVERAFK 256
           +Y+ +++GYC + + + A+    ++ S G+     +PD+  Y TL  G      +     
Sbjct: 268 TYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHA 327

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D M R+G+  D + Y   I    K G + EA+ +F  +R      D   Y  +I  LC
Sbjct: 328 LLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILC 387

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           KSGR++ A   F  +    L    + YN +IH LC   K ++A +L L+M
Sbjct: 388 KSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEM 437



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 130/289 (44%), Gaps = 9/289 (3%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
            + P V TY  LI   C A+  +        ++ +G +   ++F  ++  LC + +  +A
Sbjct: 82  KVTPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDA 141

Query: 150 SRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM---ESMGCKHNVFSYSI 205
             + L  M ++   P+ F    L+ G C   R   A EL   M      G   +V SY+ 
Sbjct: 142 MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTT 201

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +ING+ K  +   A S Y EML + I PDVV Y+++   L +   +++A ++   M ++G
Sbjct: 202 VINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNG 261

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-----ILKYELDIRAYNCLIDGLCKSGR 320
           V  +   Y + + G C +G   EA+   + +R         E DI  Y  L+ G    G 
Sbjct: 262 VMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGA 321

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L     L   + R  +  D   YNI+I A    GK+D+A  +F  M  +
Sbjct: 322 LVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQ 370


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 210/367 (57%), Gaps = 10/367 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EAAAL  K+   G   +V TY T++NG+C+ G T  ALNL  +M   +       KP+ 
Sbjct: 238 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 291

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M ++ I PNV TYN +I GFC    W++A+ L  +
Sbjct: 292 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 351

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+V++FN +++   K GK+ EA +L + M+   + P+   YN+++ GFC   R
Sbjct: 352 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 411

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A+ +F  M S     +V +++ +I+ YC+ K ++  + L  E+  +G+  +   YNT
Sbjct: 412 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 467

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  E+  +  A  LF EM  HGV  DT      + G C+N  + EA+ELF  +++ K
Sbjct: 468 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 527

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +LD  AYN +I G+CK  ++  AW+LF SLP   +  DV TYN+MI   C    +  A 
Sbjct: 528 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 587

Query: 361 DLFLDME 367
            LF  M+
Sbjct: 588 VLFHKMK 594



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 190/365 (52%), Gaps = 14/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  PNVFTYN +I+G C  G    A  L  +M            P+ +
Sbjct: 309 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 362

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I    KEG + +A++L  +M    I P+ VTYNS+I+GFC  N +++AK +F   
Sbjct: 363 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 419

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+VV+FN I++  C+  ++DE  +LL  + + G+  N   YNTL+ GFC    +
Sbjct: 420 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 478

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A++LF  M S G   +  + +IL+ G+C+N+++E AL L+  +    I  D V YN +
Sbjct: 479 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +  +V+ A+ LF  +  HGV  D   Y   I G C    I +A  LF  ++   +
Sbjct: 539 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 598

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E D   YN LI G  K+G +  + EL   +       D  T   M+  L  DG++DK+  
Sbjct: 599 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS-- 655

Query: 362 LFLDM 366
            F DM
Sbjct: 656 -FSDM 659



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 149/297 (50%), Gaps = 10/297 (3%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A  L+ KM+   I  N+ ++N LI  FC  +  + +   F ++   G QP+VV+FN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 137 MNELCKNGKMDEA----------SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           ++ LC   ++ EA            L + M++IG+ P    +NTL++G CL GRV  A  
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAA 242

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           L   M   G   +V +Y  ++NG CK  + + AL+L S+M    IKPDVVIY+ +   L 
Sbjct: 243 LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLC 302

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +      A  LF EM   G+A + + Y   IDG C  G   +A  L R +   +   D+ 
Sbjct: 303 KDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVL 362

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +N LI    K G+L  A +L   +    +  D VTYN MI+  C   + D A+ +F
Sbjct: 363 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 419



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/389 (28%), Positives = 174/389 (44%), Gaps = 55/389 (14%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N +I    R     VA++L+ +M             N  ++  +I   C    +  +   
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPL------NIYSFNILIKCFCDCHKLSFSLST 163

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEA----------KCLFIEMMDQGVQPNVVS 132
           F K+      P+VVT+N+L+HG C  +  +EA            LF +M++ G+ P V++
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVIT 223

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN ++N LC  G++ EA+ L+  M+  G+  +   Y T+++G C  G    A  L   ME
Sbjct: 224 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 283

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ-- 250
               K +V  YS +I+  CK+     A  L+SEML KGI P+V  YN +  G     +  
Sbjct: 284 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 343

Query: 251 ---------VER------------------------AFKLFDEMQRHGVAADTWAYRTFI 277
                    +ER                        A KL DEM    +  DT  Y + I
Sbjct: 344 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 403

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            G CK+    +A  +F     L    D+  +N +ID  C++ R+    +L R + R  L+
Sbjct: 404 YGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV 459

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A+  TYN +IH  C    ++ A+DLF +M
Sbjct: 460 ANTTTYNTLIHGFCEVDNLNAAQDLFQEM 488



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 143/301 (47%), Gaps = 10/301 (3%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A + F  M         V  N +I  F   N  + A  L+ +M  + +  N+ SFN+
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA----------E 185
           ++   C   K+  +      + ++G +P+   +NTL+ G CL  R++ A           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF  M  +G    V +++ LING C    +  A +L ++M+ KG+  DVV Y T+  G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            ++   + A  L  +M+   +  D   Y   ID LCK+G+  +A  LF  +       ++
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YNC+IDG C  GR   A  L R +    +  DV+T+N +I A   +GK+ +A  L  +
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 366 M 366
           M
Sbjct: 387 M 387



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 10/234 (4%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A    + M++      A   N ++  F    R + A  L+  ME      N++S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF---------- 255
           LI  +C   ++  +LS + ++   G +PDVV +NTL  GL    ++  A           
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LFD+M   G+      + T I+GLC  G ++EA  L   +      +D+  Y  +++G+
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G  K A  L   +    +  DVV Y+ +I  LC DG    A+ LF +M  K
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 320


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 143/396 (36%), Positives = 219/396 (55%), Gaps = 31/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA  +F  + + G  P+VF+Y  ++NG    G  +   +LF+ M  G+G   V+C     
Sbjct: 344 EARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML-GDGIAPVICTFNVL 402

Query: 57  -------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                                    KP+ VTY T+I  LC+ G +D A E F +M D+ +
Sbjct: 403 IKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGV 462

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+   Y+ LI GFC      +AK L  E+M+ G++ ++V F  I+N LCK G++ +A  
Sbjct: 463 VPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQN 522

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           + +L + +G+ P+A VYN LMDG+CL G++ +A  +F +M S G + NV  Y  L+NGYC
Sbjct: 523 IFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYC 582

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   I+  LSL+ EML KGIKP  ++YN +  GLFE  +   A   F EM   G+A +  
Sbjct: 583 KIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKC 642

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   + GL KN    EA+ LF+ LR +  ++DI   N +I G+ ++ R++ A +LF S+
Sbjct: 643 TYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 702

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            R  L+   VTY+IMI  L  +G +++A D+F  M+
Sbjct: 703 SRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQ 738



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 188/351 (53%), Gaps = 4/351 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P+VF+YN L+  LC  G +  A +L   MA G    G VC P+ V Y T+IDG  K
Sbjct: 178 LGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEG----GTVCSPDVVAYNTVIDGFFK 233

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V+KA +LF +M    I P++VTY+S++H  C A   ++A+    +M+++GV P+  +
Sbjct: 234 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWT 293

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++      G+  EA R+ + M +  + P+    NTLM   C  G++  A ++F +M 
Sbjct: 294 YNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMA 353

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   +VFSY+I++NGY     +     L+  ML  GI P +  +N L         ++
Sbjct: 354 MKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLD 413

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A  +F+EM+ HGV      Y T I  LC+ G + +A+E F  +       D  AY+CLI
Sbjct: 414 KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLI 473

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            G C  G L  A EL   +    +  D+V +  +I+ LC  G++  A+++F
Sbjct: 474 QGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 189/349 (54%), Gaps = 6/349 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V  YNT+I+G  + G    A +LF+EM     + G+   P+ VTY++++  LCK  
Sbjct: 217 CSPDVVAYNTVIDGFFKEGDVNKACDLFKEMV----QRGI--PPDLVTYSSVVHALCKAR 270

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +DKA+    +M ++ + P+  TYN+LI+G+     W EA  +F EM  Q + P+VV+ N
Sbjct: 271 AMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALN 330

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +M  LCK GK+ EA  + + M   G  P+ F Y  +++G+   G +    +LF  M   
Sbjct: 331 TLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGD 390

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G    + ++++LI  Y     ++ A+ +++EM   G+KP VV Y T+   L  I +++ A
Sbjct: 391 GIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDA 450

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            + F++M   GV  D +AY   I G C +G +++A EL   +      LDI  +  +I+ 
Sbjct: 451 MEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINN 510

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCK GR+  A  +F       L  D V YN+++   C  GKM+KA  +F
Sbjct: 511 LCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVF 559



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 193/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++R     P+V   NTL+  LC+ G    A ++F+ MA   G+      P+  
Sbjct: 309 EAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVF 362

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YT +++G   +G +    +LF  M  + I P + T+N LI  +      ++A  +F EM
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV+P+VV++  ++  LC+ GKMD+A      MI  GV P+ + Y+ L+ GFC  G +
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   + + G + ++  +  +IN  CK   +  A +++   ++ G+ PD V+YN L
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E+A ++FD M   G+  +   Y T ++G CK G I E + LFR +     
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     YN +IDGL ++GR   A   F  +    +  +  TY+I++  L  +   D+A  
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 362 LFLDMEA 368
           LF ++ A
Sbjct: 663 LFKELRA 669



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 171/355 (48%), Gaps = 41/355 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G +P+V TY T+I  LCR G    A+  F +M +     GVV  P+  
Sbjct: 414 KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ----GVV--PDKY 467

Query: 62  TYTTIIDGLCKEGFVDKAKELFLK--------------------------MKDENI---- 91
            Y  +I G C  G + KAKEL  +                          M  +NI    
Sbjct: 468 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT 527

Query: 92  -----NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                +P+ V YN L+ G+C      +A  +F  M+  G++PNVV +  ++N  CK G++
Sbjct: 528 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRI 587

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DE   L   M+Q G++P+  +YN ++DG    GR   A+  F  M   G   N  +YSI+
Sbjct: 588 DEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIV 647

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + G  KN+  + A+ L+ E+ +  +K D++  NT+  G+F+  +VE A  LF  + R G+
Sbjct: 648 LRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGL 707

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
                 Y   I  L K G + EA ++F +++    E D R  N ++  L K   +
Sbjct: 708 VPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 762



 Score =  164 bits (414), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/367 (28%), Positives = 183/367 (49%), Gaps = 7/367 (1%)

Query: 1   MEAAALFMKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+ A  F++  V  G  P+ +TYN LI G   TG    A+ +F+EM   +        P+
Sbjct: 272 MDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQS------ILPD 325

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V   T++  LCK G + +A+++F  M  +  NP+V +Y  +++G+       +   LF 
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+  G+ P + +FNV++      G +D+A  +   M   GV+P+   Y T++   C  G
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +++ A E F  M   G   + ++Y  LI G+C +  +  A  L SE+++ G++ D+V + 
Sbjct: 446 KMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFG 505

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           ++   L ++ +V  A  +FD     G+  D   Y   +DG C  G + +A+ +F  +   
Sbjct: 506 SIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSA 565

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             E ++  Y  L++G CK GR+     LFR + +  +    + YNI+I  L   G+   A
Sbjct: 566 GIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPA 625

Query: 360 RDLFLDM 366
           +  F +M
Sbjct: 626 KVKFHEM 632



 Score =  157 bits (398), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 175/345 (50%), Gaps = 7/345 (2%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
           +  C +G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++
Sbjct: 82  SAACGSGPAL-AVALFNRAAS-RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQL 139

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGK 145
               +  + +  + L+ GFC A   +EA  + +    + G  P+V S+N+++  LC  GK
Sbjct: 140 LRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGK 199

Query: 146 MDEASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
             +A  LL +M + G    P+   YNT++DGF   G VN+A +LF  M   G   ++ +Y
Sbjct: 200 SGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTY 259

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +++  CK + ++ A +   +M++KG+ PD   YN L  G     Q + A ++F EM+R
Sbjct: 260 SSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 319

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
             +  D  A  T +  LCK G I EA ++F T+ +     D+ +Y  +++G    G L  
Sbjct: 320 QSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVD 379

Query: 324 AWELFRSLPRGVLIADVV-TYNIMIHALCADGKMDKARDLFLDME 367
             +LF  L  G  IA V+ T+N++I A    G +DKA  +F +M 
Sbjct: 380 MTDLF-DLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMR 423



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 122/247 (49%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R +A + + L+ GFC   R + A 
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSY+IL+   C   +   A  L   M   G    PDVV YNT+ 
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +      
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   YN LI G   +G+ K A  +F+ + R  ++ DVV  N ++ +LC  GK+ +ARD+
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 349 FDTMAMK 355


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 198/341 (58%), Gaps = 6/341 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + ++ LI    + G    A+ +F +M            P+TVTY T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIH  C  + W++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +   Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L K GR   A +LF +L    L+ DV TY++M   L   G
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 208/434 (47%), Gaps = 74/434 (17%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++   GC PNVF+YN L+ GLC    +  AL L + M +  G+    C P+ V+YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTY--------------------------- 98
           +I+G  KEG +DKA   + +M D  I PNVVTY                           
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 99  --------NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                   NS++HG+C +    EA     +M   GV+P+VV++N +M+ LCKNG+  EA 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           ++ + M + G++P    Y TL+ G+   G +     L   M   G   N + +SILI  Y
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD----------- 259
            K  +++ A+ ++S+M  +G+ PD V Y T+   L +  +VE A + F+           
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 260 ------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
                                   EM   G+  DT  + + ID  CK G ++E+ +LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + DI  Y+ LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 356 MDKARDLFLDMEAK 369
           M+ A  LF +ME+ 
Sbjct: 565 MEDALVLFREMESS 578



 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 204/396 (51%), Gaps = 29/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA     K+   G EP+V TYN+L++ LC+ G    A  +F+ M                
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 47  NGNGEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G    G + +              PN   ++ +I    K+G VD+A  +F KM+ + +N
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ VTY ++I   C +    +A   F +M+D+ + P  + +N +++ LC   K D+A  L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M+  G+  +   +N+++D  C  GRV  +E+LF  M  +G K ++ +YS LI+GYC 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A  L + M+S G+KPD V YNTL  G  +I ++E A  LF EM+  GV+ D   
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GL +      A EL+  +     +L++  YN ++ GLCK+     A  +F++L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              L  +  T+NIMI AL   G+ D+A+DLF  + A
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 7/371 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G   +++  N  +  + R      A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I   C  G +D        +  +    + + +  L+ G C     ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDGFCLT 178
           M Q G  PNV S+N+++  LC   +  EA  LL++M   G    P+   Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +++A   +  M   G   NV +YS +I   CK + ++ A+ + + M+  G+ P+   Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++  G     Q + A     +M   GV  D   Y + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +I  Y  L+ G    G L     L   + R  +  +   ++I+I A    GK+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 359 ARDLFLDMEAK 369
           A  +F  M  +
Sbjct: 393 AMLVFSKMRQQ 403



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TY+TLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LF ++ + G   +V +YS++     +   +E    L+  M   G   +  + N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L++ +   G +  + TYN +++GLC+   T  AL +F+ +   + +        T T
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRT 656

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I  L K G  D+AK+LF  +    + P+V TY+ +           E   LF+ M 
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + G   N    N I+ +L + G +  A   L
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYL 747


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 210/367 (57%), Gaps = 10/367 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EAAAL  K+   G   +V TY T++NG+C+ G T  ALNL  +M   +       KP+ 
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 296

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M ++ I PNV TYN +I GFC    W++A+ L  +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+V++FN +++   K GK+ EA +L + M+   + P+   YN+++ GFC   R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A+ +F  M S     +V +++ +I+ YC+ K ++  + L  E+  +G+  +   YNT
Sbjct: 417 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  E+  +  A  LF EM  HGV  DT      + G C+N  + EA+ELF  +++ K
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +LD  AYN +I G+CK  ++  AW+LF SLP   +  DV TYN+MI   C    +  A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 361 DLFLDME 367
            LF  M+
Sbjct: 593 VLFHKMK 599



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 190/365 (52%), Gaps = 14/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  PNVFTYN +I+G C  G    A  L  +M            P+ +
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 367

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I    KEG + +A++L  +M    I P+ VTYNS+I+GFC  N +++AK +F   
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+VV+FN I++  C+  ++DE  +LL  + + G+  N   YNTL+ GFC    +
Sbjct: 425 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A++LF  M S G   +  + +IL+ G+C+N+++E AL L+  +    I  D V YN +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +  +V+ A+ LF  +  HGV  D   Y   I G C    I +A  LF  ++   +
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E D   YN LI G  K+G +  + EL   +       D  T   M+  L  DG++DK+  
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS-- 660

Query: 362 LFLDM 366
            F DM
Sbjct: 661 -FSDM 664



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 149/302 (49%), Gaps = 15/302 (4%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A  L+ KM+   I  N+ ++N LI  FC  +  + +   F ++   G QP+VV+FN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 137 MNELCKNGKMDEA---------------SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ LC   ++ EA                 L + M++IG+ P    +NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M   G   +V +Y  ++NG CK  + + AL+L S+M    IKPDVVIY+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +      A  LF EM   G+A + + Y   IDG C  G   +A  L R +   + 
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  +N LI    K G+L  A +L   +    +  D VTYN MI+  C   + D A+ 
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422

Query: 362 LF 363
           +F
Sbjct: 423 MF 424



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 174/394 (44%), Gaps = 60/394 (15%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N +I    R     VA++L+ +M             N  ++  +I   C    +  +   
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPL------NIYSFNILIKCFCDCHKLSFSLST 163

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF-----------IEMMDQ----GVQ 127
           F K+      P+VVT+N+L+HG C  +  +EA  LF           + + DQ    G+ 
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P V++FN ++N LC  G++ EA+ L+  M+  G+  +   Y T+++G C  G    A  L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              ME    K +V  YS +I+  CK+     A  L+SEML KGI P+V  YN +  G   
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 248 IHQ-----------VER------------------------AFKLFDEMQRHGVAADTWA 272
             +           +ER                        A KL DEM    +  DT  
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + I G CK+    +A  +F     L    D+  +N +ID  C++ R+    +L R + 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           R  L+A+  TYN +IH  C    ++ A+DLF +M
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 15/240 (6%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            +D+A    + M++      A   N ++  F    R + A  L+  ME      N++S++
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF------ 258
           ILI  +C   ++  +LS + ++   G +PDVV +NTL  GL    ++  A  LF      
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205

Query: 259 ---------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
                    D+M   G+      + T I+GLC  G ++EA  L   +      +D+  Y 
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +++G+CK G  K A  L   +    +  DVV Y+ +I  LC DG    A+ LF +M  K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 210/367 (57%), Gaps = 10/367 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EAAAL  K+   G   +V TY T++NG+C+ G T  ALNL  +M   +       KP+ 
Sbjct: 27  LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 80

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M ++ I PNV TYN +I GFC    W++A+ L  +
Sbjct: 81  VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 140

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+V++FN +++   K GK+ EA +L + M+   + P+   YN+++ GFC   R
Sbjct: 141 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 200

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A+ +F  M S     +V +++ +I+ YC+ K ++  + L  E+  +G+  +   YNT
Sbjct: 201 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 256

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  E+  +  A  LF EM  HGV  DT      + G C+N  + EA+ELF  +++ K
Sbjct: 257 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 316

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +LD  AYN +I G+CK  ++  AW+LF SLP   +  DV TYN+MI   C    +  A 
Sbjct: 317 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 376

Query: 361 DLFLDME 367
            LF  M+
Sbjct: 377 VLFHKMK 383



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 190/365 (52%), Gaps = 14/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  PNVFTYN +I+G C  G    A  L  +M            P+ +
Sbjct: 98  DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 151

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I    KEG + +A++L  +M    I P+ VTYNS+I+GFC  N +++AK +F   
Sbjct: 152 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 208

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+VV+FN I++  C+  ++DE  +LL  + + G+  N   YNTL+ GFC    +
Sbjct: 209 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 267

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A++LF  M S G   +  + +IL+ G+C+N+++E AL L+  +    I  D V YN +
Sbjct: 268 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +  +V+ A+ LF  +  HGV  D   Y   I G C    I +A  LF  ++   +
Sbjct: 328 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 387

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E D   YN LI G  K+G +  + EL   +       D  T   M+  L  DG++DK+  
Sbjct: 388 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS-- 444

Query: 362 LFLDM 366
            F DM
Sbjct: 445 -FSDM 448



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 145/276 (52%), Gaps = 4/276 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P V+T+N+LI+G C      EA  L  +M+ +G+  +VV++  I+N +CK G    A 
Sbjct: 6   LTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSAL 65

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            LL  M +  ++P+  +Y+ ++D  C  G  + A+ LF  M   G   NVF+Y+ +I+G+
Sbjct: 66  NLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGF 125

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C       A  L  +M+ + I PDV+ +N L     +  ++  A KL DEM    +  DT
Sbjct: 126 CSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDT 185

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y + I G CK+    +A  +F     L    D+  +N +ID  C++ R+    +L R 
Sbjct: 186 VTYNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE 241

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + R  L+A+  TYN +IH  C    ++ A+DLF +M
Sbjct: 242 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 277



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 106/208 (50%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++IG+ P    +NTL++G CL GRV  A  L   M   G   +V +Y  ++NG CK  +
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            + AL+L S+M    IKPDVVIY+ +   L +      A  LF EM   G+A + + Y  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDG C  G   +A  L R +   +   D+  +N LI    K G+L  A +L   +    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLF 363
           +  D VTYN MI+  C   + D A+ +F
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMF 208



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 117/249 (46%), Gaps = 4/249 (1%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G+ P V++FN ++N LC  G++ EA+ L+  M+  G+  +   Y T+++G C  G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  L   ME    K +V  YS +I+  CK+     A  L+SEML KGI P+V  YN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G     +   A +L  +M    +  D   +   I    K G + EA +L   +    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   YN +I G CK  R   A  +F  +       DVVT+N +I   C   ++D+  
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 361 DLFLDMEAK 369
            L  ++  +
Sbjct: 237 QLLREISRR 245


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 198/341 (58%), Gaps = 6/341 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + ++ LI    + G    A+ +F +M            P+TVTY T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIH  C  + W++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +   Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L K GR   A +LF +L    L+ DV TY++M   L   G
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 207/431 (48%), Gaps = 74/431 (17%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   GC PNVF+YN L+ GLC    +  AL L + M +  G+    C P+ V+YTT+I+
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGD----CPPDVVSYTTVIN 207

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTY------------------------------ 98
           G  KEG +DKA   + +M D  I PNVVTY                              
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 99  -----NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
                NS++HG+C +    EA     +M   GV+P+VV++N +M+ LCKNG+  EA ++ 
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M + G++P    Y TL+ G+   G +     L   M   G   N + +SILI  Y K 
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD-------------- 259
            +++ A+ ++S+M  +G+ PD V Y T+   L +  +VE A + F+              
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 260 ---------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
                                EM   G+  DT  + + ID  CK G ++E+ +LF  +  
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + DI  Y+ LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +M+ 
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 359 ARDLFLDMEAK 369
           A  LF +ME+ 
Sbjct: 568 ALVLFREMESS 578



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 204/396 (51%), Gaps = 29/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA     K+   G EP+V TYN+L++ LC+ G    A  +F+ M                
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 47  NGNGEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G    G + +              PN   ++ +I    K+G VD+A  +F KM+ + +N
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ VTY ++I   C +    +A   F +M+D+ + P  + +N +++ LC   K D+A  L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M+  G+  +   +N+++D  C  GRV  +E+LF  M  +G K ++ +YS LI+GYC 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A  L + M+S G+KPD V YNTL  G  +I ++E A  LF EM+  GV+ D   
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GL +      A EL+  +     +L++  YN ++ GLCK+     A  +F++L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              L  +  T+NIMI AL   G+ D+A+DLF  + A
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/371 (24%), Positives = 167/371 (45%), Gaps = 7/371 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G   +++  N  +  + R      A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++   C  G +D        +  +    + + +  ++ G C     ++A  + +  
Sbjct: 93  TYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRR 152

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDGFCLT 178
           M Q G  PNV S+N+++  LC + +  EA  LL++M   G    P+   Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +++A   +  M   G   NV +YS +I   CK + ++ A+ + + M+  G+ P+   Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++  G     Q + A     +M   GV  D   Y + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +I  Y  L+ G    G L     L   + R  +  +   ++I+I A    GK+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 359 ARDLFLDMEAK 369
           A  +F  M  +
Sbjct: 393 AMLVFSKMRQQ 403



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TY+TLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LF ++ + G   +V +YS++     +   +E    L+  M   G   +  + N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L++ +   G +  + TYN +++GLC+   T  AL +F+ +   + +        T T
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRT 656

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I  L K G  D+AK+LF  +    + P+V TY+ +           E   LF+ M 
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + G   N    N I+ +L + G +  A   L
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYL 747


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 142/367 (38%), Positives = 212/367 (57%), Gaps = 7/367 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA +L  +    G   +   Y T+INGLC+ G T  A+ +F +M        +   PN 
Sbjct: 157 LEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKK------IRVYPNL 210

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y T+IDGLCK+G VD+A  L  +M +  I  +V +YNS+IHGFC    +  A  L  E
Sbjct: 211 IMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDE 270

Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+ +G V P+V +FN++++ LCK G++ EA  ++ +MI+ G +P+   YN LM+G+CL+G
Sbjct: 271 MVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSG 330

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V  A+++F  M       NV SY  LINGYCK + ++ A+ L +EM +K + PD V YN
Sbjct: 331 SVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYN 390

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GL +  +    + L + M+  G  AD   Y   +D   K+    +A+ LF+ +  +
Sbjct: 391 CLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEI 450

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +IR YN L+DGLCKSGRLK A E+F+ L       ++ TYNIMIH LC +G +D+A
Sbjct: 451 GISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEA 510

Query: 360 RDLFLDM 366
             L   M
Sbjct: 511 EALLYKM 517



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/343 (29%), Positives = 164/343 (47%), Gaps = 36/343 (10%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           KP+ +T++ +I+   + G +  A  L   +       +V    +L+ G C      EA  
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  E +D+G + + V +  I+N LCK GK  +A ++   M +I V PN  +YNT++DG C
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDV 235
             G V+ A  L   M   G + +V+SY+ +I+G+C     + A+ L  EM+ +G + PDV
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             +N L  GL ++ +V  A+ +   M + G   D  +Y   ++G C +G + EA ++F  
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341

Query: 296 L----------------------------RILKYEL-------DIRAYNCLIDGLCKSGR 320
           +                             +L  E+       D   YNCL+DGL KSGR
Sbjct: 342 MVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR 401

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
               W+L  ++      AD++TYN+++       K DKA  LF
Sbjct: 402 SLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALF 444



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/282 (29%), Positives = 143/282 (50%), Gaps = 1/282 (0%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
             I P+++T++ LI+ F        A  L   ++  G Q +V     +M  LC  G++ E
Sbjct: 99  PTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLE 158

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A  LL   +  G R +   Y T+++G C  G+   A ++F  M+ +    N+  Y+ +I+
Sbjct: 159 AVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVID 218

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG-VA 267
           G CK   ++ A  L +EM+  GI+ DV  YN++  G   + + + A KL DEM   G V 
Sbjct: 219 GLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVY 278

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D + +   IDGLCK G + EA  +   +    ++ DI +YN L++G C SG +  A ++
Sbjct: 279 PDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV 338

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F  +     + +V++Y  +I+  C    +D+A  L  +M  K
Sbjct: 339 FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNK 380



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 141/271 (52%), Gaps = 2/271 (0%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           +N L+        +N    L+  +  +  ++P++++F++++N   + G+M  A  LL  +
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +++G + +  +  TLM G CL GRV  A  L       G + +   Y  +ING CK  + 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             A+ ++ +M    + P++++YNT+  GL +   V+ A  L  EM  +G+  D ++Y + 
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 277 IDGLCKNGYIVEAVELFRTLRIL-KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
           I G C  G    AV+L   + +  K   D+  +N LIDGLCK GR+  A+ +   + +  
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              D+V+YN +++  C  G + +A+ +F  M
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 198/341 (58%), Gaps = 6/341 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + ++ LI    + G    A+ +F +M            P+TVTY T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIH  C  + W++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +   Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L K GR   A +LF +L    L+ DV TY++M   L   G
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/434 (30%), Positives = 208/434 (47%), Gaps = 74/434 (17%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++   GC PNVF+YN L+ GLC    +  AL L + M +  G+    C P+ V+YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTY--------------------------- 98
           +I+G  KEG +DKA   + +M D  I PNVVTY                           
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 99  --------NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                   NS++HG+C +    EA     +M   GV+P+VV++N +M+ LCKNG+  EA 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           ++ + M + G++P    Y TL+ G+   G +     L   M   G   N + +SILI  Y
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD----------- 259
            K  +++ A+ ++S+M  +G+ PD V Y T+   L +  +VE A + F+           
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGN 444

Query: 260 ------------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
                                   EM   G+  DT  + + ID  CK G ++E+ +LF  
Sbjct: 445 IVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDL 504

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + DI  Y+ LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 505 MVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISR 564

Query: 356 MDKARDLFLDMEAK 369
           M+ A  LF +ME+ 
Sbjct: 565 MEDALVLFREMESS 578



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 204/396 (51%), Gaps = 29/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA     K+   G EP+V TYN+L++ LC+ G    A  +F+ M                
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 47  NGNGEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G    G + +              PN   ++ +I    K+G VD+A  +F KM+ + +N
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ VTY ++I   C +    +A   F +M+D+ + P  + +N +++ LC   K D+A  L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M+  G+  +   +N+++D  C  GRV  +E+LF  M  +G K ++ +YS LI+GYC 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A  L + M+S G+KPD V YNTL  G  +I ++E A  LF EM+  GV+ D   
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GL +      A EL+  +     +L++  YN ++ GLCK+     A  +F++L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              L  +  T+NIMI AL   G+ D+A+DLF  + A
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 7/371 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G   +++  N  +  + R      A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I   C  G +D        +  +    + + +  L+ G C     ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDGFCLT 178
           M Q G  PNV S+N+++  LC   +  EA  LL++M   G    P+   Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +++A   +  M   G   NV +YS +I   CK + ++ A+ + + M+  G+ P+   Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++  G     Q + A     +M   GV  D   Y + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +I  Y  L+ G    G L     L   + R  +  +   ++I+I A    GK+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 359 ARDLFLDMEAK 369
           A  +F  M  +
Sbjct: 393 AMLVFSKMRQQ 403



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TY+TLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LF ++ + G   +V +YS++     +   +E    L+  M   G   +  + N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L++ +   G +  + TYN +++GLC+   T  AL +F+ +   + +        T T
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRT 656

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I  L K G  D+AK+LF  +    + P+V TY+ +           E   LF+ M 
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + G   N    N I+ +L + G +  A   L
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYL 747


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 127/341 (37%), Positives = 198/341 (58%), Gaps = 6/341 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + ++ LI    + G    A+ +F +M            P+TVTY T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIH  C  + W++AK L +EM+D+G+  + + F
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFF 482

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 483 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 542

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K +  +Y+ LINGYCK   +E AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 543 VGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 602

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +   Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I 
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 662

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L K GR   A +LF +L    L+ DV TY++M   L   G
Sbjct: 663 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQG 703



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/431 (30%), Positives = 207/431 (48%), Gaps = 74/431 (17%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   GC PNVF+YN L+ GLC    +  AL L + M +  G+    C P+ V+YTT+I+
Sbjct: 152 RMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTTVIN 207

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTY------------------------------ 98
           G  KEG +DKA   + +M D  I PNVVTY                              
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMP 267

Query: 99  -----NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
                NS++HG+C +    EA     +M   GV+P+VV++N +M+ LCKNG+  EA ++ 
Sbjct: 268 NCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMF 327

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M + G++P    Y TL+ G+   G +     L   M   G   N + +SILI  Y K 
Sbjct: 328 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQ 387

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD-------------- 259
            +++ A+ ++S+M  +G+ PD V Y T+   L +  +VE A + F+              
Sbjct: 388 GKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVY 447

Query: 260 ---------------------EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
                                EM   G+  DT  + + ID  CK G ++E+ +LF  +  
Sbjct: 448 NSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVR 507

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + DI  Y+ LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +M+ 
Sbjct: 508 IGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMED 567

Query: 359 ARDLFLDMEAK 369
           A  LF +ME+ 
Sbjct: 568 ALVLFREMESS 578



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 204/396 (51%), Gaps = 29/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA     K+   G EP+V TYN+L++ LC+ G    A  +F+ M                
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLL 346

Query: 47  NGNGEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G    G + +              PN   ++ +I    K+G VD+A  +F KM+ + +N
Sbjct: 347 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLN 406

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ VTY ++I   C +    +A   F +M+D+ + P  + +N +++ LC   K D+A  L
Sbjct: 407 PDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKEL 466

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M+  G+  +   +N+++D  C  GRV  +E+LF  M  +G K ++ +YS LI+GYC 
Sbjct: 467 ILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCL 526

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A  L + M+S G+KPD V YNTL  G  +I ++E A  LF EM+  GV+ D   
Sbjct: 527 AGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIIT 586

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GL +      A EL+  +     +L++  YN ++ GLCK+     A  +F++L 
Sbjct: 587 YNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 646

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              L  +  T+NIMI AL   G+ D+A+DLF  + A
Sbjct: 647 LTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSA 682



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 7/371 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G   +++  N  +  + R      A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I   C  G +D        +  +    + + +  L+ G C     ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDGFCLT 178
           M Q G  PNV S+N+++  LC   +  EA  LL++M   G    P+   Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +++A   +  M   G   NV +YS +I   CK + ++ A+ + + M+  G+ P+   Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++  G     Q + A     +M   GV  D   Y + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +I  Y  L+ G    G L     L   + R  +  +   ++I+I A    GK+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 359 ARDLFLDMEAK 369
           A  +F  M  +
Sbjct: 393 AMLVFSKMRQQ 403



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TY+TLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 496 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 549

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 550 VTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 609

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 610 ITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 669

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LF ++ + G   +V +YS++     +   +E    L+  M   G   +  + N+
Sbjct: 670 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 729

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + RA
Sbjct: 730 IVRKLLQRGDITRA 743



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 69/151 (45%), Gaps = 6/151 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L++ +   G +  + TYN +++GLC+   T  AL +F+ +   + +        T T
Sbjct: 603 AKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL------ETRT 656

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I  L K G  D+AK+LF  +    + P+V TY+ +           E   LF+ M 
Sbjct: 657 FNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSME 716

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + G   N    N I+ +L + G +  A   L
Sbjct: 717 ENGCTANSRMLNSIVRKLLQRGDITRAGTYL 747


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 134/367 (36%), Positives = 210/367 (57%), Gaps = 10/367 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EAAAL  K+   G   +V TY T++NG+C+ G T  ALNL  +M   +       KP+ 
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 296

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IID LCK+G    A+ LF +M ++ I PNV TYN +I GFC    W++A+ L  +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+V++FN +++   K GK+ EA +L + M+   + P+   YN+++ GFC   R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A+ +F  M S     +V +++ +I+ YC+ K ++  + L  E+  +G+  +   YNT
Sbjct: 417 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  E+  +  A  LF EM  HGV  DT      + G C+N  + EA+ELF  +++ K
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +LD  AYN +I G+CK  ++  AW+LF SLP   +  DV TYN+MI   C    +  A 
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592

Query: 361 DLFLDME 367
            LF  M+
Sbjct: 593 VLFHKMK 599



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 180/350 (51%), Gaps = 10/350 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  PNVFTYN +I+G C  G    A  L  +M            P+ +
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 367

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I    KEG + +A++L  +M    I P+ VTYNS+I+GFC  N +++AK +F   
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+VV+FN I++  C+  ++DE  +LL  + + G+  N   YNTL+ GFC    +
Sbjct: 425 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A++LF  M S G   +  + +IL+ G+C+N+++E AL L+  +    I  D V YN +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +  +V+ A+ LF  +  HGV  D   Y   I G C    I +A  LF  ++   +
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           E D   YN LI G  K+G +  + EL   +       D  T  +    +C
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIIC 653



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 148/266 (55%), Gaps = 10/266 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TYN++I G C+      A ++F+ MA+          P+ VT+ TIID  C+   V
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----------PDVVTFNTIIDVYCRAKRV 448

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+  +L  ++    +  N  TYN+LIHGFC  ++ N A+ LF EM+  GV P+ ++ N++
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C+N K++EA  L E++    +  +   YN ++ G C   +V+ A +LF S+   G 
Sbjct: 509 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 568

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +V +Y+++I+G+C    I  A  L+ +M   G +PD   YNTL  G  +  +++++ +
Sbjct: 569 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 628

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCK 282
           L  EM+ +G + D +  +   + +C+
Sbjct: 629 LISEMRSNGFSGDAFTIKMAEEIICR 654



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 149/302 (49%), Gaps = 15/302 (4%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A  L+ KM+   I  N+ ++N LI  FC  +  + +   F ++   G QP+VV+FN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182

Query: 137 MNELCKNGKMDEA---------------SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ LC   ++ EA                 L + M++IG+ P    +NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M   G   +V +Y  ++NG CK  + + AL+L S+M    IKPDVVIY+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +      A  LF EM   G+A + + Y   IDG C  G   +A  L R +   + 
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  +N LI    K G+L  A +L   +    +  D VTYN MI+  C   + D A+ 
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422

Query: 362 LF 363
           +F
Sbjct: 423 MF 424



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 174/394 (44%), Gaps = 60/394 (15%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N +I    R     VA++L+ +M             N  ++  +I   C    +  +   
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPL------NIYSFNILIKCFCDCHKLSFSLST 163

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF-----------IEMMDQ----GVQ 127
           F K+      P+VVT+N+L+HG C  +  +EA  LF           + + DQ    G+ 
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P V++FN ++N LC  G++ EA+ L+  M+  G+  +   Y T+++G C  G    A  L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              ME    K +V  YS +I+  CK+     A  L+SEML KGI P+V  YN +  G   
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 248 IHQ-----------VER------------------------AFKLFDEMQRHGVAADTWA 272
             +           +ER                        A KL DEM    +  DT  
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + I G CK+    +A  +F     L    D+  +N +ID  C++ R+    +L R + 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           R  L+A+  TYN +IH  C    ++ A+DLF +M
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 110/239 (46%), Gaps = 15/239 (6%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A    + M++      A   N ++  F    R + A  L+  ME      N++S++I
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF------- 258
           LI  +C   ++  +LS + ++   G +PDVV +NTL  GL    ++  A  LF       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 259 --------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
                   D+M   G+      + T I+GLC  G ++EA  L   +      +D+  Y  
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +++G+CK G  K A  L   +    +  DVV Y+ +I  LC DG    A+ LF +M  K
Sbjct: 267 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 202/354 (57%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + ++ L+    +      A+ +F +M            PN VTY  +I  LCK 
Sbjct: 258 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQG------LNPNAVTYGAVIGILCKS 311

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A   F +M DE ++P  + YNSLIHG C  N W  A+ L +EM+D+G+  N + F
Sbjct: 312 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 371

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++  CK G++ E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ A +L  SM S
Sbjct: 372 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS 431

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K +  +YS LINGYCK   ++ AL L+ EM S G+ PD++ YN +  GLF+  +   
Sbjct: 432 VGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAA 491

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  + + G   +   Y   + GLCKN    +A+ +F+ L ++  +L+ R +N +ID
Sbjct: 492 AKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 551

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR   A +LF +     L+ +  TY +M   +   G +++   LFL ME
Sbjct: 552 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 605



 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/390 (31%), Positives = 195/390 (50%), Gaps = 41/390 (10%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V +Y+T+ING  + G      + + EM +          PN VTY +II  LCK  
Sbjct: 84  CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDQR------ISPNVVTYNSIIAALCKAQ 137

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VDKA E+   M    + P+ +TYNS++HGFC +    EA     +M   GV+P+VV++N
Sbjct: 138 TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 197

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG--------------- 179
            +M+ LCKNG+  EA ++ + M + G++P    Y TL+ G+   G               
Sbjct: 198 SLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 257

Query: 180 --------------------RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
                               +V  A  +F  M   G   N  +Y  +I   CK+  +E A
Sbjct: 258 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDA 317

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           +  + +M+ +G+ P  ++YN+L  GL   ++ ERA +L  EM   G+  +T  + + ID 
Sbjct: 318 MLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDS 377

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            CK G ++E+ +LF  +  +  + DI  Y+ LIDG C +G++  A +L  S+    +  D
Sbjct: 378 HCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPD 437

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            VTY+ +I+  C   +M  A  LF +ME+ 
Sbjct: 438 CVTYSTLINGYCKISRMKDALVLFREMESS 467



 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EP+V TYN+L++ LC+ G    A  +F+ M           KP   
Sbjct: 176 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG------LKPEIT 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+PN   ++ L+  +       EA  +F +M
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN V++  ++  LCK+G++++A    E MI  G+ P   VYN+L+ G C   + 
Sbjct: 290 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RAEEL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KPD++ Y+TL
Sbjct: 350 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A KL   M   G+  D   Y T I+G CK   + +A+ LFR +     
Sbjct: 410 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGV 469

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN ++ GL ++ R   A EL+  + +     ++ TYNI++H LC +   D A  
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR 529

Query: 362 LFLDM 366
           +F ++
Sbjct: 530 MFQNL 534



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/421 (29%), Positives = 202/421 (47%), Gaps = 76/421 (18%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYN++++G C +G    A+   ++M +   E      P+ VTY +++D LCK 
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVE------PDVVTYNSLMDYLCKN 206

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------------YANDW-- 111
           G   +A+++F  M    + P + TY +L+ G+                     + N +  
Sbjct: 207 GRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 266

Query: 112 -------------NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                         EA  +F +M  QG+ PN V++  ++  LCK+G++++A    E MI 
Sbjct: 267 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 326

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM--------------------------E 192
            G+ P   VYN+L+ G C   +  RAEEL + M                          E
Sbjct: 327 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386

Query: 193 S---------MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           S         +G K ++ +YS LI+GYC   +++ A  L + M+S G+KPD V Y+TL  
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G  +I +++ A  LF EM+  GV+ D   Y   + GL +      A EL+  +     +L
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++  YN ++ GLCK+     A  +F++L    L  +  T+NIMI AL   G+ D+A+DLF
Sbjct: 507 ELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 566

Query: 364 L 364
           +
Sbjct: 567 V 567



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 170/352 (48%), Gaps = 29/352 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  +F K+R  G  PN  TY  +I  LC++G    A+  FE+M +     G +      
Sbjct: 281 EAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 340

Query: 56  -----CKP------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                C                    NT+ + +IID  CKEG V ++++LF  M    + 
Sbjct: 341 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVK 400

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+++TY++LI G+C A   +EA  L   M+  G++P+ V+++ ++N  CK  +M +A  L
Sbjct: 401 PDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVL 460

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M   GV P+   YN ++ G   T R   A+EL+V +   G +  + +Y+I+++G CK
Sbjct: 461 FREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCK 520

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           NK  + AL ++  +    +K +   +N +   L ++ + + A  LF     +G+  + W 
Sbjct: 521 NKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 580

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           YR   + +   G + E  +LF ++      +D    N ++  L + G +  A
Sbjct: 581 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 632



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 6/285 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TY+TLI+G C  G    A  L   M +      V  KP+ 
Sbjct: 385 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVS------VGMKPDC 438

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I+G CK   +  A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 439 VTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVG 498

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G Q  + ++N+I++ LCKN   D+A R+ + +  + ++  A  +N ++D     GR
Sbjct: 499 ITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGR 558

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LFV+  S G   N ++Y ++         +E    L+  M   G   D  + N 
Sbjct: 559 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 618

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 619 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 663



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 153/330 (46%), Gaps = 10/330 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L +++   G   N   +N++I+  C+ G  I +  LF+ M       GV  KP+ +T
Sbjct: 352 AEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMV----RIGV--KPDIIT 405

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T+IDG C  G +D+A +L   M    + P+ VTY++LI+G+C  +   +A  LF EM 
Sbjct: 406 YSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREME 465

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV P+++++N+I+  L +  +   A  L   + + G +     YN ++ G C     +
Sbjct: 466 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTD 525

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +F ++  M  K    +++I+I+   K    + A  L+    S G+ P+   Y  + 
Sbjct: 526 DALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMA 585

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             +     +E   +LF  M+ +G   D+      +  L + G I  A      +    + 
Sbjct: 586 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFS 645

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           L+    +  ID L   G+ +   E  R LP
Sbjct: 646 LEASTASLFID-LLSGGKYQ---EYHRFLP 671



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 129/259 (49%), Gaps = 3/259 (1%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNT 170
           +A+ +F E++ +G+ P+V S+N+++N LC   +  EA  LL +M   G    P+   Y+T
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++GF   G +++    +  M       NV +Y+ +I   CK + ++ A+ + + M+  G
Sbjct: 94  VINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 153

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           + PD + YN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA 
Sbjct: 154 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 213

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           ++F ++     + +I  Y  L+ G    G L     L   + R  +  +   ++I++ A 
Sbjct: 214 KIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 273

Query: 351 CADGKMDKARDLFLDMEAK 369
               K+++A  +F  M  +
Sbjct: 274 AKQEKVEEAMLVFSKMRQQ 292


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/365 (38%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  K+   G  PN  TYN +++GLC       AL LF+EM          C P+  T
Sbjct: 168 AVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGS-----CPPDVFT 222

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+TI+D L K G VD A  L   M  +  +PNVVTY+SL+HG C A   +EA  L   M 
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 282

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PN+V++N I++  CK G++DEA  LLE M+  G +PN   Y  L+D FC  G+  
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 342

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M   G   N+F+Y+ L++ +CK  E+E A  L S M+ KG  P+VV YNT+ 
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  +V     L ++M  +    D   + T ID +CK   +  A ELF  ++     
Sbjct: 403 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 462

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARD 361
            ++  YN L+ GLCKS R   A  L R + R      D++TYN +I  LC   ++D+A  
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 522

Query: 362 LFLDM 366
           LFL M
Sbjct: 523 LFLQM 527



 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 134/403 (33%), Positives = 207/403 (51%), Gaps = 42/403 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++ + GC P+V +Y T+INGLC+      A  + ++M          C+PN +T
Sbjct: 98  ALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG------CQPNVIT 151

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM- 121
           Y T++DG C+ G +D A EL  KM +    PN +TYN+++HG C     + A  LF EM 
Sbjct: 152 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211

Query: 122 -----------------------------------MDQGVQPNVVSFNVIMNELCKNGKM 146
                                              + +G  PNVV+++ +++ LCK GK+
Sbjct: 212 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKL 271

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA+ LL+ M + G  PN   YNT++DG C  GR++ A  L   M   GC+ NV +Y++L
Sbjct: 272 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVL 331

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++ +CK  + E A+ L   M+ KG  P++  YN+L     +  +VERA +L   M + G 
Sbjct: 332 LDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGC 391

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +  +Y T I GLCK   + E V L   +       DI  +N +ID +CK+ R+ IA+E
Sbjct: 392 VPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYE 451

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF  +       ++VTYN ++H LC   + D+A  L  +M  K
Sbjct: 452 LFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 494



 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 201/366 (54%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC PN+ TYNT+I+G C+ G    A +L EEM +G       C+PN V
Sbjct: 273 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG------CQPNVV 326

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D  CK G  + A  L   M ++   PN+ TYNSL+  FC  ++   A  L   M
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PNVVS+N ++  LCK  K+ E   LLE M+     P+   +NT++D  C T RV
Sbjct: 387 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 446

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
           + A ELF  ++  GC  N+ +Y+ L++G CK++  + A  L  EM  K G  PD++ YNT
Sbjct: 447 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 506

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +V+RA+KLF +M   G+A D   Y   I  LCK  ++ EA  +   +    
Sbjct: 507 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 566

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           ++     Y  LIDG CK+G L  A E+ + L       DVVT++I I  L   G++ +A 
Sbjct: 567 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 626

Query: 361 DLFLDM 366
           +L   M
Sbjct: 627 ELLETM 632



 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 191/347 (55%), Gaps = 8/347 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +   + +++ GLC  G    A+  F EM+         C P++VTY T+I+GL K 
Sbjct: 5   GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-------TCPPDSVTYNTMINGLSKS 57

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D A  L  +M D    PNV +YN+++HGFC AN    A  L  +M+ +G  P+VVS+
Sbjct: 58  DRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSY 117

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N LCK  ++DEA R+++ MIQ G +PN   Y TL+DGFC  G ++ A EL   M  
Sbjct: 118 TTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE 177

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVE 252
            G + N  +Y+ +++G C  ++++ AL L+ EM   G   PDV  Y+T+   L +  +V+
Sbjct: 178 RGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVD 237

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L + M   G + +   Y + + GLCK G + EA  L + +       +I  YN +I
Sbjct: 238 DACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 297

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           DG CK GR+  A+ L   +  G    +VVTY +++ A C  GK + A
Sbjct: 298 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 167/315 (53%), Gaps = 7/315 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L   +   GC PNV +YNT+I GLC+       + L E+M + N      C P+ V
Sbjct: 378 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN------CVPDIV 431

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ TIID +CK   VD A ELF  +++    PN+VTYNSL+HG C +  +++A+ L  EM
Sbjct: 432 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491

Query: 122 M-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              QG  P+++++N +++ LCK+ ++D A +L   M+  G+ P+   Y+ ++   C    
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +   M   G      +Y  LI+G+CK   ++ AL +   +LSKG  PDVV ++ 
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               L +  ++ +A +L + M R G+  DT  Y T + G C      +AV+LF  +R   
Sbjct: 612 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCG 671

Query: 301 YELDIRAYNCLIDGL 315
            E D   Y  L+  L
Sbjct: 672 CEPDNATYTTLVGHL 686



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 41/266 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF  ++  GC PN+ TYN+L++GLC++     A  L  EM    G     C P+ +T
Sbjct: 449 AYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG-----CSPDIIT 503

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENI------------------------------- 91
           Y T+IDGLCK   VD+A +LFL+M  + +                               
Sbjct: 504 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 563

Query: 92  ----NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
               +P  +TY +LI GFC   + ++A  +   ++ +G  P+VV+F++ ++ L K G++ 
Sbjct: 564 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 623

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A  LLE M++ G+ P+   YNTL+ GFC   R   A +LF  M   GC+ +  +Y+ L+
Sbjct: 624 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683

Query: 208 NGYCKNKEIEGALSLYSE-MLSKGIK 232
                 K  +  L+  S+ M+  G K
Sbjct: 684 GHLVDKKSYKDLLAEVSKSMVDTGFK 709



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 112/212 (52%), Gaps = 1/212 (0%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M + G++ +A V+ +++ G C  G+ + A   F  M S  C  +  +Y+ +ING  K+  
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMINGLSKSDR 59

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+ L  EM+  G  P+V  YNT+  G  + ++VE A  L ++M   G   D  +Y T
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTT 119

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+GLCK   + EA  +   +     + ++  Y  L+DG C+ G L  A EL R +    
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              + +TYN ++H LC+  K+D A  LF +ME
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEME 211


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 136/354 (38%), Positives = 208/354 (58%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+++T+N LI      G    A+ +F EM     + GV  KP+ VTY T+I  LC+ 
Sbjct: 389 GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR----DHGV--KPDVVTYRTVIAALCRI 442

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F +M D+ + P+   Y+ LI GFC      +AK L  E+M+ G+  ++V F
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I+N LCK G++ +A  + +L + +G+ P A VY+ LMDG+CL G++ +A  +F +M S
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + N   Y  L+NGYCK   I+  LSL+ EML KGIKP  ++YN +  GLFE  +   
Sbjct: 563 AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 622

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   F EM   G+A +   Y   + GL KN    EA+ LF+ LR +  +++I   N +I 
Sbjct: 623 AKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIA 682

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+ ++ R++ A +LF S+ R  L+  VVTY+IMI  L  +G +++A D+F  M+
Sbjct: 683 GMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQ 736



 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 191/351 (54%), Gaps = 4/351 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P+VF+Y+ L+  LC  G +  A +L   MA G    G VC P+ V Y+T+IDG  K
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYSTVIDGFFK 231

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V+KA +LF +M    I P+ VTY+S++H  C A   ++A+    +M+++GV PN  +
Sbjct: 232 EGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWT 291

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++      G+  EA R+ + M +  + P+    + LM   C  G++  A ++F +M 
Sbjct: 292 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMA 351

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   NVFSY+I++NGY     +     L+  ML  GI PD+  +N L         ++
Sbjct: 352 MKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLD 411

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A  +F+EM+ HGV  D   YRT I  LC+ G + +A+E F  +       D  AY+CLI
Sbjct: 412 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 471

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            G C  G L  A EL   +    +  D+V ++ +I+ LC  G++  A+++F
Sbjct: 472 QGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 156/308 (50%), Gaps = 6/308 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + Y+ LI G C  G  + A  L  E+ N      +V       +++II+ LCK 
Sbjct: 459 GVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIV------FFSSIINNLCKL 512

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +F    +  ++P  V Y+ L+ G+C      +A  +F  M+  G++PN V +
Sbjct: 513 GRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVY 572

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N  CK G++DE   L   M+Q G++P+  +YN ++DG    GR   A+  F  M  
Sbjct: 573 GTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTE 632

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +Y+I++ G  KN+  + A+ L+ E+ +  +K +++  NT+  G+F+  +VE 
Sbjct: 633 SGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEE 692

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF  + R G+      Y   I  L K G + EA ++F +++    E D R  N ++ 
Sbjct: 693 AKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVR 752

Query: 314 GLCKSGRL 321
            L K   +
Sbjct: 753 ELLKKNEI 760



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 173/344 (50%), Gaps = 5/344 (1%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
           +  CR+G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++
Sbjct: 80  SAACRSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQL 137

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGK 145
               +  N++  N L+ GFC A   +EA  + +    + G  P+V S+++++  LC  GK
Sbjct: 138 LRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGK 197

Query: 146 MDEASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
             +A  LL +M + G    P+   Y+T++DGF   G VN+A +LF  M   G   +  +Y
Sbjct: 198 SGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTY 257

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +++  CK + ++ A +   +M++KG+ P+   YN L  G     Q + A ++F EM+R
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
           H +  D       +  LCK G I EA ++F T+ +     ++ +Y  +++G    G L  
Sbjct: 318 HSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVD 377

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             +LF  +    +  D+ T+N++I A    G +DKA  +F +M 
Sbjct: 378 MTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR 421



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 154/332 (46%), Gaps = 9/332 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++   G   ++  ++++IN LC+ G  + A N+F+   N      V   P  
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN------VGLHPTA 534

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ ++DG C  G ++KA  +F  M    I PN V Y +L++G+C     +E   LF E
Sbjct: 535 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFRE 594

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +N+I++ L + G+   A      M + G+  N   YN ++ G      
Sbjct: 595 MLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRC 654

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A  LF  + +M  K N+ + + +I G  + + +E A  L++ +   G+ P VV Y+ 
Sbjct: 655 FDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSI 714

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L +   VE A  +F  MQ  G   D+      +  L K   IV A      +    
Sbjct: 715 MITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERN 774

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + L+      L+D     G  +   E  R LP
Sbjct: 775 FSLEHLTTMLLVDLFSSKGTCR---EHIRFLP 803



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 123/247 (49%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R N  + N L+ GFC   R + A 
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSYSIL+   C   +   A  L   M   G    PDVV Y+T+ 
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +      
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G   +G+ K A  +F+ + R  ++ DVVT ++++ +LC  GK+ +ARD+
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 347 FDTMAMK 353


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 132/382 (34%), Positives = 210/382 (54%), Gaps = 29/382 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGV-V 55
           EA  +F  +   G EP++ TY TL+ G    G     H ++ L +   +   +  F + +
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 56  CK-----------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           C                        PN VTY  +I  LCK G VD A   F +M DE + 
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN++ Y SLIH  C  + W++A+ L +EM+D+G+  N + FN I++  CK G++ E+ +L
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IGV+PN   Y+TL+DG+CL G+++ A +L  SM S+G K +  +Y+ LINGYC+
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL+L+ EM+S G+ P+++ YN +  GLF   +   A +L+  + + G   +   
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I  L K GR   A +LF +L 
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALS 678

Query: 333 RGVLIADVVTYNIMIHALCADG 354
              L+ DV TY++M   L   G
Sbjct: 679 ANGLVPDVRTYSLMAENLIEQG 700



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 197/425 (46%), Gaps = 76/425 (17%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  TYN++++G C +     A+   ++M +   E      P+ VTY +++D LCK 
Sbjct: 261 GVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVE------PDVVTYNSLMDYLCKN 314

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGF---------------------------- 105
           G   +A+++F  M    + P++ TY +L+ G+                            
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 106 -----CYAND--WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                 YA     +EA  +F +M   G+ PNVV++  ++  LCK+G +D+A    E MI 
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 159 IGVRPNAFVYNTLMDGFCL-----------------------------------TGRVNR 183
            G+ PN  VY +L+   C+                                    GRV  
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIE 494

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           +E+LF  M  +G K NV +YS LI+GYC   +++ A  L S M S G+KPD V YNTL  
Sbjct: 495 SEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLIN 554

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G   + +++ A  LF EM   GV+ +   Y   + GL        A EL+  +     +L
Sbjct: 555 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQL 614

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++  YN ++ GLCK+     A  +F++L    L  +  T+NIMI AL   G+ D+A+DLF
Sbjct: 615 ELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLF 674

Query: 364 LDMEA 368
             + A
Sbjct: 675 AALSA 679



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 204/431 (47%), Gaps = 73/431 (16%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++    C P+VF+   L+ GLC    +  AL L   MA+  G       P+ V+YTT
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTT 201

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVV----------------------------- 96
           +I+G  KEG  DKA   + +M D  I+P+VV                             
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 97  ------TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                 TYNS++HG+C +    EA     +M   GV+P+VV++N +M+ LCKNG+  EA 
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 151 R-----------------------------------LLELMIQIGVRPNAFVYNTLMDGF 175
           +                                   LL+LM++ G+ P+  V+N L+  +
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
               +V+ A  +F  M   G   NV +Y  +I   CK+  ++ A+  + +M+ +G+ P++
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           ++Y +L   L    + ++A +L  EM   G+  +T  + + I   CK G ++E+ +LF  
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDL 501

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  + ++  Y+ LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +
Sbjct: 502 MVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSR 561

Query: 356 MDKARDLFLDM 366
           MD A  LF +M
Sbjct: 562 MDDALALFKEM 572



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 10/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G      T+  L+ GLC    T  A+++    M        + C P+  + T ++ GLC 
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE------LSCMPDVFSCTILLKGLCD 170

Query: 73  EGFVDKAKELFLKMKDEN---INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           E    +A EL   M D+      P+VV+Y ++I+GF    D ++A   + EM+D+ + P+
Sbjct: 171 ENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPD 230

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+++ I+  LCK   MD+A  +L  M++ GV PN   YN+++ G+C + +   A     
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLK 290

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M S G + +V +Y+ L++  CKN     A  ++  M  +G++PD+  Y TL  G     
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKG 350

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            +     L D M R+G+  D   +   I    K   + EA+ +F  +R      ++  Y 
Sbjct: 351 ALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +I  LCKSG +  A   F  +    L  +++ Y  +IH+LC   K DKA +L L+M
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 162/371 (43%), Gaps = 10/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNT 60
           +A  +F +L   G   +++  N  +  + R      A++ +  MA  G G+      P  
Sbjct: 33  DARHVFEELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKV----TPTV 87

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I   C+ G +D        +  +      +T+  L+ G C     ++A  + + 
Sbjct: 88  HTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR 147

Query: 121 MMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFC 176
            M +    P+V S  +++  LC   +  EA  LL +M      G  P+   Y T+++GF 
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G  ++A   +  M       +V +YS +I   CK + ++ A+ + + M+  G+ P+ +
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA ++F ++
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E DI  Y  L+ G    G L     L   + R  +  D   +NI+I A     K+
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV 387

Query: 357 DKARDLFLDME 367
           D+A  +F  M 
Sbjct: 388 DEAMLVFSKMR 398



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 131/263 (49%), Gaps = 9/263 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +PNV TY+TLI+G C  G    A  L   M      F V  KP+ 
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM------FSVGMKPDC 546

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G C+   +D A  LF +M    ++PN++TYN ++ G  +      AK L++ 
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LF ++ + G   +V +YS++     +   +E    L+  M   G   +  + N+
Sbjct: 667 NDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTANSRMLNS 726

Query: 241 LFIGLFEIHQVERA---FKLFDE 260
           +   L +   + RA     + DE
Sbjct: 727 IVRKLLQRGDITRAGTYLSMIDE 749



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL--KYELDIRAYN 309
           E A  +F+E+ R G  A  +     +  + ++          R  R    K    +  Y 
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
            LI   C++GRL + +    ++ +     + +T+  ++  LCAD +   A D+ L
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 203/354 (57%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + +N +     +      A+++F +M            PN V Y T+ID LCK 
Sbjct: 374 GISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQG------LSPNVVNYATLIDALCKL 427

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A+  F +M +E + PN+V + SL++G C  + W +A  LF EM++QG+ PNVV F
Sbjct: 428 GRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFF 487

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N IM  LC  G++ +A RL++LM ++G RP+   YN L+ G CL G+ + A +L   M S
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K N  +Y+ L++GYC++  I+ A S++ EMLS GI P VV YNT+  GLF+  +   
Sbjct: 548 VGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSE 607

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M   G     + Y   ++GL KN  + EA+++F++L     ++DI  +N +I 
Sbjct: 608 AKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIG 667

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L K GR + A  LF ++    L+ DV TY ++   L  +G +++   +F +ME
Sbjct: 668 ALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEME 721



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 192/364 (52%), Gaps = 3/364 (0%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
             L  ++   GC PNV +YNTL+ G C       AL L   MA+G       C PN V+Y
Sbjct: 151 GVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVR---SCPPNLVSY 207

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
            T+I+G   EG VDKA  LFL M D+ I PNVVTY  +I G C A   + A+ +F +M+D
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID 267

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +GV+PN+V++  +++     G+  E  R+L+ M   G+ P+ F Y  L+D  C  G+   
Sbjct: 268 KGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTE 327

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A +LF SM   G K +V  Y I+++GY     +    S    M+  GI P+  I+N +F 
Sbjct: 328 ARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFC 387

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
              +   +  A  +F++M++ G++ +   Y T ID LCK G + +A   F  +       
Sbjct: 388 AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAP 447

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +I  +  L+ GLC   + + A ELF  +    +  +VV +N ++  LC +G++ KA+ L 
Sbjct: 448 NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLI 507

Query: 364 LDME 367
             ME
Sbjct: 508 DLME 511



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/426 (29%), Positives = 200/426 (46%), Gaps = 76/426 (17%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           +V  C PN+ +YNT+ING    G    A NLF +M +          PN VTYT +IDGL
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQG------IPPNVVTYTIVIDGL 249

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW------------------- 111
           CK   VD+A+ +F +M D+ + PN+VTY  LIHG+     W                   
Sbjct: 250 CKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDC 309

Query: 112 ----------------NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
                            EA+ LF  M+ +G++P+V  + +I++     G + E    L+L
Sbjct: 310 FTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDL 369

Query: 156 MIQIGVRPNAFVYN-----------------------------------TLMDGFCLTGR 180
           M+  G+ PN +++N                                   TL+D  C  GR
Sbjct: 370 MVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGR 429

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ AE  F  M + G   N+  ++ L+ G C   + E A  L+ EM+++GI P+VV +NT
Sbjct: 430 VDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNT 489

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L    +V +A +L D M+R G   D  +Y   I G C  G   EA +L   +  + 
Sbjct: 490 IMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVG 549

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +   YN L+ G C+ GR+  A+ +F+ +    +   VVTYN ++H L    +  +A+
Sbjct: 550 LKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAK 609

Query: 361 DLFLDM 366
           +L+L+M
Sbjct: 610 ELYLNM 615



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 197/396 (49%), Gaps = 29/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           E   +  ++   G EP+ FTY  L++ LC+ G    A  LF+ M                
Sbjct: 292 EVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIIL 351

Query: 47  NGNGEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           +G    G + +              PN   +  +     K+  + +A ++F KM+ + ++
Sbjct: 352 HGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLS 411

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVV Y +LI   C     ++A+  F +M+++GV PN+V F  ++  LC   K ++A  L
Sbjct: 412 PNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGEL 471

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M+  G+ PN   +NT+M   C  GRV +A+ L   ME +G + ++ SY+ LI G+C 
Sbjct: 472 FFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCL 531

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             + + A  L   MLS G+KP+   YNTL  G     +++ A+ +F EM  +G+      
Sbjct: 532 VGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVT 591

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T + GL K     EA EL+  +     +  I  YN +++GL K+  +  A ++F+SL 
Sbjct: 592 YNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLC 651

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              L  D++T+NIMI AL  DG+ + A +LF  + A
Sbjct: 652 SKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISA 687



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+ +   G  PNV TY  +I+GLC+      A  +F++M +     GV  +PN V
Sbjct: 222 KAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDK----GV--RPNIV 275

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G    G   +   +  +M    + P+  TY  L+   C      EA+ LF  M
Sbjct: 276 TYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSM 335

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+V  + +I++     G + E    L+LM+  G+ PN +++N +   F     +
Sbjct: 336 IRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMI 395

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  M   G   NV +Y+ LI+  CK   ++ A   +++M+++G+ P++V++ +L
Sbjct: 396 GEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSL 455

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  I + E+A +LF EM   G+  +   + T +  LC  G +++A  L   +  +  
Sbjct: 456 VYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGT 515

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI +YN LI G C  G+   A +L   +    L  +  TYN ++H  C DG++D A  
Sbjct: 516 RPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYS 575

Query: 362 LFLDM 366
           +F +M
Sbjct: 576 VFQEM 580



 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 185/384 (48%), Gaps = 34/384 (8%)

Query: 17  PNVFTYNTLINGLCRTG---HTIVALNLFEEM-------------------ANGNGE-FG 53
           P+VFTY+ L+   CR G   H   A  L  +                    A   GE  G
Sbjct: 92  PDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMG 151

Query: 54  VV--------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN---PNVVTYNSLI 102
           V+        C PN V+Y T++ G C E   ++A EL   M D  +    PN+V+YN++I
Sbjct: 152 VLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVI 211

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
           +GF      ++A  LF++M DQG+ PNVV++ ++++ LCK   +D A  + + MI  GVR
Sbjct: 212 NGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVR 271

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN   Y  L+ G+   G+      +   M + G + + F+Y +L++  CK  +   A  L
Sbjct: 272 PNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKL 331

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +  M+ KGIKPDV IY  +  G      +       D M  +G++ + + +        K
Sbjct: 332 FDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAK 391

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
              I EA+++F  +R      ++  Y  LID LCK GR+  A   F  +    +  ++V 
Sbjct: 392 KAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVV 451

Query: 343 YNIMIHALCADGKMDKARDLFLDM 366
           +  +++ LC   K +KA +LF +M
Sbjct: 452 FTSLVYGLCTIDKWEKAGELFFEM 475



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 146/288 (50%), Gaps = 6/288 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  PNV  +NT++  LC  G  + A  L + M        V  +P+ +
Sbjct: 467 KAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMER------VGTRPDII 520

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I G C  G  D+A +L   M    + PN  TYN+L+HG+C     ++A  +F EM
Sbjct: 521 SYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEM 580

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P VV++N I++ L K  +  EA  L   MI  G + + + YN +++G      V
Sbjct: 581 LSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCV 640

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F S+ S   + ++ +++I+I    K+   E A++L++ + + G+ PDV  Y  +
Sbjct: 641 DEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLI 700

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
              L E   +E    +F EM++ G A ++      +  L   G I  A
Sbjct: 701 AENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRA 748



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 152/351 (43%), Gaps = 75/351 (21%)

Query: 91  INPNVVTYNSLI----------HGF--------------------------CYANDWNEA 114
           + P+V TY+ L+          HGF                          C A    EA
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 115 KCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR---PNAFVYNT 170
             + +  M + G  PNVVS+N ++   C   + +EA  LL +M    VR   PN   YNT
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++GF   G+V++A  LF+ M   G   NV +Y+I+I+G CK + ++ A  ++ +M+ KG
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           ++P++V Y  L  G   I Q +   ++  EM  HG+  D + Y   +D LCK G   EA 
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLK---------------------------- 322
           +LF ++     + D+  Y  ++ G    G L                             
Sbjct: 330 KLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAF 389

Query: 323 -------IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                   A ++F  + +  L  +VV Y  +I ALC  G++D A   F  M
Sbjct: 390 AKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQM 440



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 128/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   G  P++ +YN LI G C  G T  A  L + M        V  KPN 
Sbjct: 501 MKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIM------LSVGLKPNE 554

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++ G C++G +D A  +F +M    I P VVTYN+++HG      ++EAK L++ 
Sbjct: 555 CTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLN 614

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G Q ++ ++N+I+N L KN  +DEA ++ + +    ++ +   +N ++      GR
Sbjct: 615 MITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGR 674

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  LF ++ + G   +V +Y ++     +   +E    ++SEM   G  P+ ++ N 
Sbjct: 675 KEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNF 734

Query: 241 LFIGLFEIHQVERA 254
           L   L     + RA
Sbjct: 735 LVRRLLLRGDISRA 748



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 121/249 (48%), Gaps = 5/249 (2%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRA 184
           V P+V ++++++   C+ G+++       L+++ G    +  V N L+ G C   RV  A
Sbjct: 90  VAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEA 149

Query: 185 EELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK---PDVVIYNT 240
             + +  M  +GC  NV SY+ L+ G+C     E AL L   M    ++   P++V YNT
Sbjct: 150 MGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNT 209

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G F   QV++A+ LF +M   G+  +   Y   IDGLCK   +  A  +F+ +    
Sbjct: 210 VINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKG 269

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +I  Y CLI G    G+ K    + + +    L  D  TY +++  LC  GK  +AR
Sbjct: 270 VRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEAR 329

Query: 361 DLFLDMEAK 369
            LF  M  K
Sbjct: 330 KLFDSMIRK 338



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 31/261 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ L   +   G +PN  TYNTL++G CR G    A ++F+EM + NG   VV   NT+
Sbjct: 537 EASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLS-NGITPVVVTYNTI 595

Query: 62  ------------------------------TYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                                         TY  I++GL K   VD+A ++F  +  +++
Sbjct: 596 LHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDL 655

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
             +++T+N +I          +A  LF  +   G+ P+V ++ +I   L + G ++E   
Sbjct: 656 QVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDG 715

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +   M + G  PN+ + N L+    L G ++RA      ++         + S+LI+ + 
Sbjct: 716 MFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFS 775

Query: 212 KNKEIEGALSLYSEMLSKGIK 232
           + +    +L      L++  K
Sbjct: 776 REEHQAKSLPEKYHFLNEAKK 796


>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 498

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/386 (35%), Positives = 211/386 (54%), Gaps = 27/386 (6%)

Query: 5   ALFMKLRVFGCEPNVFT-------------YNTLINGLCRTGHTIVALNLFEEMANGNGE 51
           ++F  +   G +PNV T             Y TLINGLC+ G    AL L   +      
Sbjct: 116 SVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD----- 170

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
            G + +PN V Y TIID +CK   V++A +L+ +M  E I+P+VVTY++LI GF      
Sbjct: 171 -GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKL 229

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            +A  LF +M+ + ++P+V +FN++++  CK+GKM E   +  +M++ G++PN   Y +L
Sbjct: 230 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 289

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           MDG+CL  +VN+A  +F +M   G   +  SY+I+ING+CK K+++ A++L+ +M  K I
Sbjct: 290 MDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+VV Y +L  GL +  ++  A KL DEM   GV  D   Y + +D LCKN  + +A+ 
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 409

Query: 292 L--------FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           L        F  L +  Y LD+ AY  +I G C  G    A  L   +     I D  TY
Sbjct: 410 LLTKLKDQVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTY 469

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
            I+I +L    + D A  L  +M A+
Sbjct: 470 EIIILSLFKKDENDMAEKLLREMIAR 495



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 193/366 (52%), Gaps = 23/366 (6%)

Query: 17  PNVFTYNTLINGLCRTG--HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           P +F +  ++  L +    HT ++L+   E+       G+    N VT   +I+   + G
Sbjct: 58  PPIFEFGKILGSLVKINCYHTAISLHRQMELK------GIAS--NLVTLNILINCFSQLG 109

Query: 75  FVDKAKELFLKMKDENINPNVVT-------------YNSLIHGFCYANDWNEAKCLFIEM 121
               +  +F  +  +  +PNV+T             Y +LI+G C       A  L   +
Sbjct: 110 QNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRV 169

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + VQPNVV +N I++ +CK   ++EA  L   M+  G+ P+   Y+ L+ GF + G++
Sbjct: 170 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKL 229

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M     K +V++++IL++G+CK+ +++   ++++ M+ +GIKP+VV Y +L
Sbjct: 230 KDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSL 289

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + QV +A  +F+ M + GV  DT +Y   I+G CK   + EA+ LF+ +     
Sbjct: 290 MDGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNI 349

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y  LIDGLCKSG++  A +L   +    +  D++TY+ ++ ALC + ++DKA  
Sbjct: 350 IPNVVTYTSLIDGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIA 409

Query: 362 LFLDME 367
           L   ++
Sbjct: 410 LLTKLK 415



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 164/336 (48%), Gaps = 34/336 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  P+V TY+ LI+G    G    A++LF +M   N       KP+  
Sbjct: 196 EAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMILEN------IKPDVY 249

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++DG CK+G + + K +F  M  + I PNVVTY SL+ G+C     N+A  +F  M
Sbjct: 250 TFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTM 309

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+  S+N+++N  CK  K+DEA  L + M    + PN   Y +L+DG C +G++
Sbjct: 310 AQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKI 369

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G   ++ +YS +++  CKN +++ A++L +++               
Sbjct: 370 SYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKD------------- 416

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                         ++F+++   G   D +AY   I G C  G   EA+ L   +     
Sbjct: 417 --------------QVFEDLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGR 462

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             D + Y  +I  L K     +A +L R +  RG+L
Sbjct: 463 IPDAKTYEIIILSLFKKDENDMAEKLLREMIARGLL 498



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 148/297 (49%), Gaps = 13/297 (4%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           +  +N  P +  +  ++      N ++ A  L  +M  +G+  N+V+ N+++N   + G+
Sbjct: 51  LHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQ 110

Query: 146 MDEASRLLELMIQIGVRPNAFV-------------YNTLMDGFCLTGRVNRAEELFVSME 192
              +  +   +++ G  PN                Y TL++G C  G+   A +L   ++
Sbjct: 111 NPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVD 170

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               + NV  Y+ +I+  CK K +  A  LYSEM+S+GI PDVV Y+ L  G F + +++
Sbjct: 171 GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLK 230

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  LF++M    +  D + +   +DG CK+G + E   +F  +     + ++  Y  L+
Sbjct: 231 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 290

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DG C   ++  A  +F ++ +G +  D  +YNIMI+  C   K+D+A +LF  M  K
Sbjct: 291 DGYCLVKQVNKANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCK 347



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 106/237 (44%), Gaps = 13/237 (5%)

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           + KN + +  S    L+ Q    P  F +  ++         + A  L   ME  G   N
Sbjct: 35  IIKNDEHNLVSSFNRLLHQKNPTPPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASN 94

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI-------------YNTLFIGLF 246
           + + +ILIN + +  +   + S+++ +L KG  P+V+              Y TL  GL 
Sbjct: 95  LVTLNILINCFSQLGQNPLSFSVFANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLC 154

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           ++ Q   A +L   +    V  +   Y T ID +CK   + EA +L+  +       D+ 
Sbjct: 155 KVGQARAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVV 214

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            Y+ LI G    G+LK A +LF  +    +  DV T+NI++   C DGKM + + +F
Sbjct: 215 TYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVF 271


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 133/367 (36%), Positives = 204/367 (55%), Gaps = 1/367 (0%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG-EFGVVCKPNT 60
            A  LF  ++   C P++ TYNTL++GL RTG    A+ LF+EM +    +    C PN 
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY+ +IDGLCK   V +A EL   MK    +P+V+TY  L+ G C  +    A  +  E
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G  PN+V++N +++ LC+  ++ +A  L+  M   G  PN   Y TL+DG C  GR
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  +   M   G   ++  Y++LING CK  +++ +++L    +S GIKPDVV Y++
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL   ++++ A +L   ++  G   D   Y T IDGLCK G + EA +L+  +    
Sbjct: 372 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDG 431

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D+  Y+ LIDGLCK+GR+  A  L   + R       +TYN +I  LC    +D+A 
Sbjct: 432 CDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAI 491

Query: 361 DLFLDME 367
           +L  +ME
Sbjct: 492 ELVEEME 498



 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/356 (37%), Positives = 194/356 (54%), Gaps = 8/356 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           C PNV TY+ LI+GLC+      A+ L E M A G       C P+ +TYT ++DGLCKE
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARG-------CSPDVITYTILVDGLCKE 239

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V  A E+  +M D    PN+VTYNSL+HG C A   ++A  L  +M  +G  PNVV++
Sbjct: 240 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++ LCK G++ +A  +L  MI  G  P+  +YN L++G C   +V+ +  L     S
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K +V +YS +I G C++  ++ A  L   + S+G  PDV++Y+TL  GL +  +V+ 
Sbjct: 360 GGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDE 419

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF L++ M   G  AD   Y T IDGLCK G + EA  L   +  +        YN LI 
Sbjct: 420 AFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIK 479

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GLC    L  A EL   + R       VTYNI+IH +C   ++D A  L    +A+
Sbjct: 480 GLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKAR 535



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 128/357 (35%), Positives = 199/357 (55%), Gaps = 11/357 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+ TYN+L++GLCR      AL L  +M          C PN VTY T+IDGLCK 
Sbjct: 256 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG------CTPNVVTYGTLIDGLCKV 309

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A  +   M D+   P+++ YN LI+G C A+  +E+  L    +  G++P+VV++
Sbjct: 310 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 369

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++  LC++ ++DEA RLL  +   G  P+  +Y+TL+DG C  G+V+ A +L+  M  
Sbjct: 370 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAG 429

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V +YS LI+G CK   ++ A  L + M+  G  P  + YN+L  GL +++ ++ 
Sbjct: 430 DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDE 489

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-----RTLRILKYELDIRAY 308
           A +L +EM+R   A     Y   I G+C+   +  AV L      R +      LD  AY
Sbjct: 490 AIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAY 549

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           + LIDGLCK+GR+  A + F+ +    +I D +TY+I++  L     + + R L LD
Sbjct: 550 SSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLD 606



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/375 (34%), Positives = 203/375 (54%), Gaps = 13/375 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F ++R     PNVF  + LI+GLC+   +I AL  F  M       G+V   +TV
Sbjct: 27  QAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQGS----GIV--ADTV 80

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++ GL KE  +D+A  +  +M+D    PNVVTYNSLI G C  N+ + A+ LF  M
Sbjct: 81  IYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHM 140

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-------VRPNAFVYNTLMDG 174
                 P++V++N +++ L + GK++ A  L + M+            PN   Y+ L+DG
Sbjct: 141 KSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDG 200

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C   RV++A EL  SM++ GC  +V +Y+IL++G CK  ++  A  +  EML  G  P+
Sbjct: 201 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 260

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +V YN+L  GL    +V  A  L  +M   G   +   Y T IDGLCK G + +A  +  
Sbjct: 261 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 320

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       D+  YN LI+GLCK+ ++  +  L R    G +  DVVTY+ +I+ LC   
Sbjct: 321 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 380

Query: 355 KMDKARDLFLDMEAK 369
           ++D+A  L L ++++
Sbjct: 381 RLDEACRLLLYVKSR 395



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 170/319 (53%), Gaps = 7/319 (2%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           +C+P+  TY  ++ G C+ G +D+A+  F +M+ +N+ PNV   + LI G C A    +A
Sbjct: 4   ICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDA 63

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
              F  M   G+  + V +  +++ L K  ++D+A  +L  M   G  PN   YN+L+DG
Sbjct: 64  LRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----- 229
            C     +RA+ELF  M+S+ C  ++ +Y+ L++G  +  ++E A++L+ EML +     
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDM 183

Query: 230 --GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
                P+V+ Y+ L  GL + ++V +A +L + M+  G + D   Y   +DGLCK   + 
Sbjct: 184 DDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVA 243

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            A E+ R +       ++  YN L+ GLC++ R+  A  L R +       +VVTY  +I
Sbjct: 244 AAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLI 303

Query: 348 HALCADGKMDKARDLFLDM 366
             LC  G++  A  +  DM
Sbjct: 304 DGLCKVGRVKDACAMLADM 322



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 151/285 (52%), Gaps = 7/285 (2%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+V TY +L+ GFC   + ++A+  F EM  + + PNV   +++++ LCK  +  +A R
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
               M   G+  +  +Y  L+ G     R+++A  +   M   GC+ NV +Y+ LI+G C
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM---QRHGV-- 266
           KN E + A  L+  M S    P +V YNTL  GLF   ++ERA  LF EM   + H +  
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 267 --AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
             + +   Y   IDGLCK   + +AVEL  +++      D+  Y  L+DGLCK  ++  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           WE+ R +     + ++VTYN ++H LC   ++  A  L  DM  +
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR 290



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 124/221 (56%), Gaps = 11/221 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + ++  GC P+V  Y+TLI+GLC+ G    A +L+E MA G+G     C  + V
Sbjct: 384 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMA-GDG-----CDADVV 437

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+IDGLCK G VD+A  L  +M      P+ +TYNSLI G C  N  +EA  L  EM
Sbjct: 438 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 497

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE-----LMIQIGVRPNAFVYNTLMDGFC 176
                 P+ V++N++++ +C+  ++D A  LLE      +   G   +   Y++L+DG C
Sbjct: 498 ERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLC 557

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             GRV  A + F  M   G   +  +YSIL+ G  K+K++ 
Sbjct: 558 KAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 598



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 11/128 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-----MANGNGEFGVVC 56
           EA  L  ++    C P+  TYN LI+G+CR      A+ L E+     +A G        
Sbjct: 489 EAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTAL---- 544

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
             +T+ Y+++IDGLCK G V +A + F +M D  + P+ +TY+ L+ G   + D +E + 
Sbjct: 545 --DTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRH 602

Query: 117 LFIEMMDQ 124
           L ++ M Q
Sbjct: 603 LVLDQMVQ 610


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 132/395 (33%), Positives = 214/395 (54%), Gaps = 29/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGV-V 55
           EA  +F  +   G EP++ TY TL+ G    G     H ++ L +   +   +  F + +
Sbjct: 319 EARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILI 378

Query: 56  C-----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           C                        PN VTY  +I  LCK G VD A   F +M DE + 
Sbjct: 379 CAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLT 438

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN++ Y SLIH  C  + W++A+ L +EM+D+G+  N + FN I++  CK G++ E+ +L
Sbjct: 439 PNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKL 498

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            +LM++IGV+PN   Y+TL+DG+CL G+++ A +L  SM S+G K +  +Y+ LINGYC+
Sbjct: 499 FDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR 558

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ AL+L+ EM+S G+ P+++ YN +  GLF   +   A +L+  + + G   +   
Sbjct: 559 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELST 618

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + GLCKN    EA+ +F+ L +   +L+ R +N +I  L K GR   A +LF +  
Sbjct: 619 YNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFS 678

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              L+ +  TY +M   +   G +++   LF  ME
Sbjct: 679 SNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSME 713



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 203/428 (47%), Gaps = 73/428 (17%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++    C P+VF+   L+ GLC    +  AL L   MA+  G       P+ V+YTT+I+
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSA---PDVVSYTTVIN 204

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVV-------------------------------- 96
           G  KEG  DKA   + +M D  I+P+VV                                
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMP 264

Query: 97  ---TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR-- 151
              TYNS++HG+C +    EA     +M   GV+P+VV++N +M+ LCKNG+  EA +  
Sbjct: 265 NCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIF 324

Query: 152 ---------------------------------LLELMIQIGVRPNAFVYNTLMDGFCLT 178
                                            LL+LM++ G+ P+  V+N L+  +   
Sbjct: 325 DSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQ 384

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            +V+ A  +F  M   G   NV +Y  +I   CK+  ++ A+  + +M+ +G+ P++++Y
Sbjct: 385 EKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVY 444

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            +L   L    + ++A +L  EM   G+  +T  + + I   CK G ++E+ +LF  +  
Sbjct: 445 TSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVR 504

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + ++  Y+ LIDG C +G++  A +L  S+    +  D VTYN +I+  C   +MD 
Sbjct: 505 IGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDD 564

Query: 359 ARDLFLDM 366
           A  LF +M
Sbjct: 565 ALALFKEM 572



 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EP+V TYN+L++ LC+ G +  A  +F+ M     E      P+  
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLE------PDIA 337

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+P+   +N LI  +      +EA  +F +M
Sbjct: 338 TYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKM 397

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNVV++  ++  LCK+G +D+A    E MI  G+ PN  VY +L+   C+  + 
Sbjct: 398 RQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKW 457

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++AEEL + M   G   N   ++ +I+ +CK   +  +  L+  M+  G+KP+V+ Y+TL
Sbjct: 458 DKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A KL   M   G+  D   Y T I+G C+   + +A+ LF+ +     
Sbjct: 518 IDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  YN ++ GL  + R   A EL+  + +     ++ TYNI++H LC +   D+A  
Sbjct: 578 SPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALR 637

Query: 362 LFLDM 366
           +F ++
Sbjct: 638 MFQNL 642



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 176/357 (49%), Gaps = 10/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G      T+  L+ GLC    T  A+++    M        + C P+  + T ++ GLC 
Sbjct: 117 GFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE------LSCMPDVFSCTILLKGLCD 170

Query: 73  EGFVDKAKELFLKMKDEN---INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           E    +A EL   M D+      P+VV+Y ++I+GF    D ++A   + EM+D+ + P+
Sbjct: 171 ENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPD 230

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+++ I+  LCK   MD+A  +L  M++ GV PN   YN+++ G+C + +   A     
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLK 290

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M S G + +V +Y+ L++  CKN     A  ++  M  +G++PD+  Y TL  G     
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKG 350

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            +     L D M R+G+  D   +   I    K   + EA+ +F  +R      ++  Y 
Sbjct: 351 ALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYG 410

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +I  LCKSG +  A   F  +    L  +++ Y  +IH+LC   K DKA +L L+M
Sbjct: 411 AVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEM 467



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 169/358 (47%), Gaps = 41/358 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+R  G  PNV TY  +I  LC++G    A+  FE+M +          PN +
Sbjct: 389 EAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEG------LTPNII 442

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENI------------------------------ 91
            YT++I  LC     DKA+EL L+M D  I                              
Sbjct: 443 VYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLM 502

Query: 92  -----NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                 PNV+TY++LI G+C A   +EA  L   M   G++P+ V++N ++N  C+  +M
Sbjct: 503 VRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRM 562

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A  L + M+  GV PN   YN ++ G   T R   A+EL+V +   G +  + +Y+I+
Sbjct: 563 DDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNII 622

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CKN   + AL ++  +    ++ +   +N +   L ++ + + A  LF     +G+
Sbjct: 623 LHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGL 682

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
             + W YR   + +   G + E  +LF ++      +D    N ++  L + G +  A
Sbjct: 683 VPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 6/285 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +PNV TY+TLI+G C  G    A  L   M      F V  KP+ 
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM------FSVGMKPDC 546

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G C+   +D A  LF +M    ++PN++TYN ++ G  +      AK L++ 
Sbjct: 547 VTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVG 606

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G Q  + ++N+I++ LCKN   DEA R+ + +    ++     +N ++      GR
Sbjct: 607 ITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGR 666

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A++LFV+  S G   N ++Y ++         +E    L+  M   G   D  + N 
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNF 726

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +   L +  ++ RA      +     + +      FID L    Y
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 162/371 (43%), Gaps = 10/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNT 60
           +A  +F +L   G   +++  N  +  + R      A++ +  MA  G G+      P  
Sbjct: 33  DARHVFDELLRRGRGASIYGLNRALADVARHSPA-AAVSRYNRMARAGAGKV----TPTV 87

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I   C+ G +D        +  +      +T+  L+ G C     ++A  + + 
Sbjct: 88  HTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLR 147

Query: 121 MMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFC 176
            M +    P+V S  +++  LC   +  EA  LL +M      G  P+   Y T+++GF 
Sbjct: 148 RMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFF 207

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G  ++A   +  M       +V +YS +I   CK + ++ A+ + + M+  G+ P+ +
Sbjct: 208 KEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCM 267

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA ++F ++
Sbjct: 268 TYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSM 327

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E DI  Y  L+ G    G L     L   + R  +  D   +NI+I A     K+
Sbjct: 328 TKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKV 387

Query: 357 DKARDLFLDME 367
           D+A  +F  M 
Sbjct: 388 DEAMLVFSKMR 398



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 153/331 (46%), Gaps = 10/331 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L +++   G   N   +N++I+  C+ G  I +  LF+ M       GV  KPN +
Sbjct: 459 KAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMV----RIGV--KPNVI 512

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+IDG C  G +D+A +L   M    + P+ VTYN+LI+G+C  +  ++A  LF EM
Sbjct: 513 TYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEM 572

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV PN++++N+I+  L    +   A  L   + + G +     YN ++ G C     
Sbjct: 573 VSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLT 632

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +F ++     +    +++I+I    K    + A  L+    S G+ P+   Y  +
Sbjct: 633 DEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              +     +E   +LF  M+ +G   D+      +  L + G I  A      +    +
Sbjct: 693 AENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHF 752

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            L+    +  ID L   G+ +   E  R LP
Sbjct: 753 SLEASTASLFID-LLSGGKYQ---EYHRFLP 779



 Score = 41.6 bits (96), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 2/115 (1%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL--KYELDIRAYN 309
           E A  +FDE+ R G  A  +     +  + ++          R  R    K    +  Y 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
            LI   C++GRL + +    ++ +     + +T+  ++  LCAD +   A D+ L
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 146


>gi|356497979|ref|XP_003517833.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 595

 Score =  246 bits (628), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/358 (36%), Positives = 201/358 (56%), Gaps = 6/358 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L+  G E + +T   +INGLC+ GH+  AL+  ++M   N      C  +   Y  ++DG
Sbjct: 174 LKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQN------CNLDVTAYNAVVDG 227

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK+G V +A +LF +M  + I P++ TYN LIHG C  + W EA  L   MM +G+ P+
Sbjct: 228 LCKDGMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 287

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V +FNVI     K G +  A  +   M  +G+  +   Y++++   C+  ++  A E+F 
Sbjct: 288 VQTFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFD 347

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   GC  N+ +Y+ LI+G+C+ K +  A+    EM++ G+ P++V +NTL  G  +  
Sbjct: 348 LMIRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAG 407

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +   A +LF  M +HG   D       +DGL K  +  EA+ LFR L  +  +LDI  Y+
Sbjct: 408 KPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYS 467

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            +++G+C SG+L  A ELF  L    +  DVVTYNIMI+ LC +G +D A DL + ME
Sbjct: 468 IILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKME 525



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 177/364 (48%), Gaps = 7/364 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G +P++FTYN LI+GLC       A  L   M       G++  P+  
Sbjct: 236 EAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRK----GIM--PDVQ 289

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  I     K G + +AK +F  M    I  +VVTY+S+I   C  N   +A  +F  M
Sbjct: 290 TFNVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLM 349

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PN+V++  +++  C+   M++A   L  M+  G+ PN   +NTL+ GFC  G+ 
Sbjct: 350 IRKGCLPNIVTYTSLIHGWCEIKNMNKAMYFLGEMVNNGLDPNIVTWNTLIGGFCKAGKP 409

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ELF  M   G   ++ + +I+++G  K      A+SL+ E+       D++IY+ +
Sbjct: 410 VAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSII 469

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    ++  A +LF  +   GV  D   Y   I+GLCK G + +A +L   +     
Sbjct: 470 LNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGC 529

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN  + GL +   +  + +    +      A+  T  ++I+   A+ K ++A  
Sbjct: 530 PPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRANATTTKLLINYFSAN-KENRAFQ 588

Query: 362 LFLD 365
           +FL 
Sbjct: 589 VFLQ 592



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 150/326 (46%), Gaps = 15/326 (4%)

Query: 34  HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
           H +V +  F  + + N  FG+V K     YTT I              L   M    + P
Sbjct: 67  HKMVTMKPFPCVKDFNLLFGIVAKMKH--YTTAI-------------SLIKHMSYIGVKP 111

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           NV T+N +I+  C  N       +   M   GV+P++V+F  I+N LC  G + +A R +
Sbjct: 112 NVPTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFV 171

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + +  +G   + +    +++G C  G  + A      ME   C  +V +Y+ +++G CK+
Sbjct: 172 DHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKD 231

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +  A  L+S+M  KGI+PD+  YN L  GL    + + A  L   M R G+  D   +
Sbjct: 232 GMVFEAWDLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF 291

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
                   K G I  A  +F  +  +  E D+  Y+ +I   C   ++K A E+F  + R
Sbjct: 292 NVIGGRFLKTGMISRAKSIFSFMGHMGIEHDVVTYSSIIGVHCMLNQMKDAMEVFDLMIR 351

Query: 334 GVLIADVVTYNIMIHALCADGKMDKA 359
              + ++VTY  +IH  C    M+KA
Sbjct: 352 KGCLPNIVTYTSLIHGWCEIKNMNKA 377



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 8/279 (2%)

Query: 99  NSLIHGFC----YANDWNEAKCLFIEMMDQGVQPNVVSFNV----IMNELCKNGKMDEAS 150
           +S IHGF     +A   N    L              S N      ++ L     +D A 
Sbjct: 4   SSSIHGFPLLRYFALSSNPTHFLLHPSHSSSTFSTYASINTSRAQFLDSLRNVKSVDVAL 63

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
                M+ +   P    +N L            A  L   M  +G K NV +++I+IN  
Sbjct: 64  DFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVPTHNIVINCL 123

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+        S+   M   G++P +V + T+  GL     V +A +  D ++  G  +D 
Sbjct: 124 CRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDR 183

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           +     I+GLCK G+   A+   + +      LD+ AYN ++DGLCK G +  AW+LF  
Sbjct: 184 YTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYNAVVDGLCKDGMVFEAWDLFSQ 243

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    +  D+ TYN +IH LC   +  +A  L  +M  K
Sbjct: 244 MTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRK 282


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  246 bits (627), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/348 (38%), Positives = 198/348 (56%), Gaps = 6/348 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
            +Y TLINGLC+ G T  A+ L   +   +       KP+ V Y  IID LCK   V +A
Sbjct: 175 ISYGTLINGLCKIGETKAAIQLMRNLEERS------IKPDVVMYNIIIDSLCKNKLVGEA 228

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
             L+ +M  + I PNVVTY +LI+GFC      EA  L  EM  + + P+V +F+++++ 
Sbjct: 229 CNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDA 288

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L K GKM  A  +L +M++  V+P+   YN+L+DG+ L   V  A+ +F SM   G    
Sbjct: 289 LGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG 348

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V SY+I+I+G CK K ++ A+SL+ EM  K + P+ + +N+L  GL +  ++   + L D
Sbjct: 349 VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVD 408

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M+     AD   Y + ID LCKN ++ +A+ LF+ +   + + D+  Y  LIDGLCK G
Sbjct: 409 KMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           RLKIA E+F+ L       D+ TY +MI   C  G  D+A  L   ME
Sbjct: 469 RLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKME 516



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/402 (31%), Positives = 184/402 (45%), Gaps = 76/402 (18%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   L     +P+V  YN +I+ LC+      A NL+ EM N    +     PN VT
Sbjct: 193 AIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM-NAKQIY-----PNVVT 246

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENIN------------------------------ 92
           YTT+I G C  G + +A  L  +MK +NIN                              
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 93  -----PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                P+VVTYNSL+ G+   N+   AK +F  M   GV P V S+ ++++ LCK   +D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA  L E M    V PN   +N+L+DG C +GR+    +L   M       +V +YS LI
Sbjct: 367 EAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLI 426

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +  CKN  ++ A++L+ +M+++ I+PD+  Y  L                          
Sbjct: 427 DALCKNCHLDQAIALFKKMITQEIQPDMYTYTIL-------------------------- 460

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
                    IDGLCK G +  A E+F+ L I  Y LDIR Y  +I G CK+G    A  L
Sbjct: 461 ---------IDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALAL 511

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +     I + +T++I+I AL    + DKA  L  +M A+
Sbjct: 512 LSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIAR 553



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 151/270 (55%), Gaps = 13/270 (4%)

Query: 1   MEAA----ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 56
           M+AA    A+ MK  V   +P+V TYN+L++G         A  +F  MA      GV  
Sbjct: 295 MKAAKIVLAVMMKAYV---KPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQS----GVT- 346

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            P   +YT +IDGLCK   VD+A  LF +MK +N+ PN +T+NSLI G C +        
Sbjct: 347 -PGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWD 405

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +M D+    +V++++ +++ LCKN  +D+A  L + MI   ++P+ + Y  L+DG C
Sbjct: 406 LVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLC 465

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  A+E+F  +   G   ++ +Y+++I+G+CK    + AL+L S+M   G  P+ +
Sbjct: 466 KGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAI 525

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            ++ +   LFE  + ++A KL  EM   G+
Sbjct: 526 TFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 172/370 (46%), Gaps = 56/370 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L   L   G   ++ T N LIN  C  G   ++ ++   +            P+ +T
Sbjct: 88  AISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYH------PDVIT 141

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENI----NPNVVTYNSLIHGFCYANDWNEAKCLF 118
            TT+I GLC  G V KA    LK  D+ +      + ++Y +LI+G C   +   A  L 
Sbjct: 142 LTTLIKGLCLRGEVKKA----LKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLM 197

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             + ++ ++P+VV +N+I++ LCKN  + EA  L   M    + PN   Y TL+ GFC+ 
Sbjct: 198 RNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIM 257

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A  L   M+      +V+++SILI+   K  +++ A  + + M+   +KPDVV Y
Sbjct: 258 GCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTY 317

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L  G F +++V+ A  +F+ M + GV                                
Sbjct: 318 NSLVDGYFLVNEVKHAKYVFNSMAQSGVTPG----------------------------- 348

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM-- 356
                 +++Y  +IDGLCK+  +  A  LF  +    +I + +T+N +I  LC  G++  
Sbjct: 349 ------VQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAY 402

Query: 357 -----DKARD 361
                DK RD
Sbjct: 403 VWDLVDKMRD 412



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 153/312 (49%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P T  +  I+  L K      A  L   +  + I  ++VT N LI+ FC+      +  +
Sbjct: 67  PPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSV 126

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              ++ +G  P+V++   ++  LC  G++ +A +  + ++ +  + +   Y TL++G C 
Sbjct: 127 LATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCK 186

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +L  ++E    K +V  Y+I+I+  CKNK +  A +LYSEM +K I P+VV 
Sbjct: 187 IGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVT 246

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G   +  +  A  L +EM+   +  D + +   ID L K G +  A  +   + 
Sbjct: 247 YTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMM 306

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+  YN L+DG      +K A  +F S+ +  +   V +Y IMI  LC    +D
Sbjct: 307 KAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVD 366

Query: 358 KARDLFLDMEAK 369
           +A  LF +M+ K
Sbjct: 367 EAISLFEEMKHK 378



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 133/271 (49%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A  LF +M      P    +N+++        +  A  L   +  +G+  ++V+ N++
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  C  G++  +  +L  +++ G  P+     TL+ G CL G V +A +    + ++  
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +  SY  LING CK  E + A+ L   +  + IKPDVV+YN +   L +   V  A  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L+ EM    +  +   Y T I G C  G ++EAV L   +++     D+  ++ LID L 
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALG 290

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           K G++K A  +   + +  +  DVVTYN ++
Sbjct: 291 KEGKMKAAKIVLAVMMKAYVKPDVVTYNSLV 321



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 119/252 (47%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           ND N+A  LF  M+     P    FN I++ L K  +   A  L + +   G+  +    
Sbjct: 48  NDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTL 107

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++ FC  G++  +  +  ++   G   +V + + LI G C   E++ AL  + ++++
Sbjct: 108 NILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVA 167

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
              + D + Y TL  GL +I + + A +L   ++   +  D   Y   ID LCKN  + E
Sbjct: 168 LEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGE 227

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  L+  +   +   ++  Y  LI G C  G L  A  L   +    +  DV T++I+I 
Sbjct: 228 ACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILID 287

Query: 349 ALCADGKMDKAR 360
           AL  +GKM  A+
Sbjct: 288 ALGKEGKMKAAK 299



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 109/223 (48%)

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           ++A  L   M+ +   P  F +N ++       R   A  L   ++  G   ++ + +IL
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN +C   +I  + S+ + +L +G  PDV+   TL  GL    +V++A K  D++     
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D  +Y T I+GLCK G    A++L R L     + D+  YN +ID LCK+  +  A  
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACN 230

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+  +    +  +VVTY  +I+  C  G + +A  L  +M+ K
Sbjct: 231 LYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLK 273


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 141/405 (34%), Positives = 217/405 (53%), Gaps = 48/405 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A++   KL   G EP++FT+ +LING C       A+++  +M     E G+  KP+ V 
Sbjct: 125 ASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV----EMGI--KPDVVI 178

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTTIID LCK G VD A  LF +M++  I P+VV Y SL++G C +  W +A  L   MM
Sbjct: 179 YTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMM 238

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + ++P+V++FN +++   K GK+ +A  L   MIQ+ + PN F Y +L++G C+ GR++
Sbjct: 239 KRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLD 298

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F  ME+ GC  +V +Y+ LING+CK K++E A+ ++ EM  KG+  + + Y TL 
Sbjct: 299 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLI 358

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + +   A ++F  M   GV  +   Y   +  LC NG + +A+ +F  ++  K E
Sbjct: 359 QGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQ--KRE 416

Query: 303 LD-----IRAYNCLIDGL-----------------------------------CKSGRLK 322
           +D     IR YN L+ GL                                   CK+G++K
Sbjct: 417 IDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVK 476

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A  LF SLP   +  +VVTY  MI  L  +G M +A  LF  M+
Sbjct: 477 DALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMK 521



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 153/270 (56%), Gaps = 9/270 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L+ ++      PN+FTY +LINGLC  G    A  +F  M          C P+ 
Sbjct: 263 LDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKG------CFPDV 316

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT++I+G CK   V+ A ++F +M  + +  N +TY +LI GF      N A+ +F  
Sbjct: 317 VAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGH 376

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFCL 177
           M+ +GV PN+ ++NV+++ LC NGK+++A  + E M +    GV PN   YN L+ G C 
Sbjct: 377 MVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++ +A  +F  M+       + +Y+I+I G CK  +++ AL+L+  + SKG+KP+VV 
Sbjct: 437 NGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVT 496

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           Y T+  GLF    +  A  LF +M+  GV+
Sbjct: 497 YTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 151/272 (55%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y  ++    ++  +NEA  LF  M++    P+++ F  ++N + K  K D    L + + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +GV  + +  N LM+ FC + +   A      +  +G + ++F+++ LING+C    IE
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIE 158

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+S+ ++M+  GIKPDVVIY T+   L +   V+ A  LF++M+ +G+  D   Y + +
Sbjct: 159 EAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLV 218

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC +G   +A  L R +   K + D+  +N LID   K G+L  A EL+  + +  + 
Sbjct: 219 NGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIA 278

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ++ TY  +I+ LC +G++D+AR +F  ME K
Sbjct: 279 PNIFTYTSLINGLCMEGRLDEARQMFYLMETK 310



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 173/332 (52%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL+LF  M            P+ + +T +++ + K    D    L   ++   ++ ++ T
Sbjct: 55  ALDLFSHMVESRP------LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYT 108

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            N L++ FC ++    A     ++M  G +P++ +F  ++N  C   +++EA  ++  M+
Sbjct: 109 CNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMV 168

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G++P+  +Y T++D  C  G V+ A  LF  ME+ G + +V  Y+ L+NG C +    
Sbjct: 169 EMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWR 228

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L   M+ + IKPDV+ +N L     +  ++  A +L++EM +  +A + + Y + I
Sbjct: 229 DADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLI 288

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC  G + EA ++F  +       D+ AY  LI+G CK  +++ A ++F  + +  L 
Sbjct: 289 NGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLT 348

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +TY  +I      GK + A+++F  M ++
Sbjct: 349 GNTITYTTLIQGFGLVGKPNVAQEVFGHMVSR 380



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 10/174 (5%)

Query: 204 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           S  +  +C  +EI            AL L+S M+     P ++ +  L   + ++ + + 
Sbjct: 30  SFWVRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDV 89

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              L   +Q  GV+ D +     ++  C++     A      L  L +E DI  +  LI+
Sbjct: 90  VINLCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLIN 149

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G C   R++ A  +   +    +  DVV Y  +I +LC +G +D A  LF  ME
Sbjct: 150 GFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQME 203


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/365 (36%), Positives = 208/365 (56%), Gaps = 6/365 (1%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A AL  K+   G +P++ T  +L+NG C+      A++L + MA    E G+  +PN V 
Sbjct: 669  ALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMA----ELGL--EPNVVI 722

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            Y T+I+GLCK   ++ A E+F  M+ + I  + VTYN+LI G C +  W +A  L  +M+
Sbjct: 723  YNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMV 782

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             + + PNV+ F  +++   K G + EA  L + MI+  V PN   YN+L++GFC+ GR+ 
Sbjct: 783  KRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLG 842

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A+ +F  M S GC  +V +Y+ LI G+CK+K +E  + L+ EM  +G+  D   YNTL 
Sbjct: 843  DAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLI 902

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             G  +  ++  A K+F+ M   GV  D   Y   +D LC NG I +A+ +   L+  + +
Sbjct: 903  HGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMD 962

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +DI  YN +I G+C++ ++K AW LFRSL R  +  D + Y  MI  LC +G   +A  L
Sbjct: 963  VDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKL 1022

Query: 363  FLDME 367
               M+
Sbjct: 1023 CTRMK 1027



 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 130/366 (35%), Positives = 202/366 (55%), Gaps = 7/366 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G +P++ T+ +L++G C       A +L   M     E      PN V 
Sbjct: 119 ALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYE------PNVVV 172

Query: 63  YTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           Y T+ID LCK G V+ A EL  +M K   +  ++VTYN+L+ G CY+ +W +A  +  +M
Sbjct: 173 YNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDM 232

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+V +F  +++   K G +DEA  L + M+Q  + PN   YN+L++G C+ GR+
Sbjct: 233 TKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRL 292

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++ F  M S GC  NV +Y+ LING+CK++ +E  + L+  M  +G+  D   YNTL
Sbjct: 293 YHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTL 352

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ ++  A  +F  M   GV  D   +   + GLC NG I  A+  F  +R  + 
Sbjct: 353 IHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEK 412

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L I AYN +I GLCK+ +++ AWELF  LP   +  D  TY IMI  LC +G   +A +
Sbjct: 413 YLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADE 472

Query: 362 LFLDME 367
           LF  M+
Sbjct: 473 LFRRMK 478



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 115/326 (35%), Positives = 180/326 (55%), Gaps = 6/326 (1%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA +L   +   G EPNV  YNT+INGLC+      AL +F  M       G+V   + V
Sbjct: 703  EAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKK----GIV--ADAV 756

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY T+I GLC  G    A  L   M    I+PNV+ + +LI  F    +  EAK L+ EM
Sbjct: 757  TYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEM 816

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + + V PN++++N ++N  C  G++ +A  + +LM+  G  P+   YNTL+ GFC + RV
Sbjct: 817  IRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 876

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                +LF  M   G   + F+Y+ LI+GYC+  ++  A  +++ M+  G+ PD+V YN L
Sbjct: 877  EDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNIL 936

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               L    ++E+A  + +++Q++ +  D   Y   I G+C+N  + EA  LFR+L     
Sbjct: 937  LDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996

Query: 302  ELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +LD  AY  +I GLC++G  + A +L
Sbjct: 997  KLDAIAYITMISGLCRNGLRREADKL 1022



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 193/364 (53%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF K+   G   +++++  LI+  CR     +AL L  +M     + G   +P+ VT  +
Sbjct: 637 LFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMM----KLGF--QPSIVTLGS 690

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++G C+     +A  L   M +  + PNVV YN++I+G C   D N A  +F  M  +G
Sbjct: 691 LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKG 750

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +  + V++N +++ LC +G+  +A+RLL  M++  + PN   +  L+D F   G +  A+
Sbjct: 751 IVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAK 810

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L+  M       N+ +Y+ LING+C    +  A  ++  M+SKG  PDVV YNTL  G 
Sbjct: 811 NLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGF 870

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +VE   KLF EM   G+  D + Y T I G C+ G +  A ++F  +       DI
Sbjct: 871 CKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDI 930

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN L+D LC +G+++ A  +   L +  +  D++TYNI+I  +C + K+ +A  LF  
Sbjct: 931 VTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRS 990

Query: 366 MEAK 369
           +  K
Sbjct: 991 LTRK 994



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/336 (35%), Positives = 179/336 (53%), Gaps = 5/336 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L   +   G EPNV  YNTLI+ LC+ G   +AL L  EM    G        + V
Sbjct: 153 DAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEK-KGRLAA----DLV 207

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ GLC  G   +A  +   M    INP+V T+ +LI  F    + +EA+ L+ +M
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + PN V++N ++N LC +G++  A +  +LM   G  PN   YNTL++GFC + RV
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRV 327

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M   G   + F+Y+ LI+GYC+  ++  A  ++S M+S G+ PD++ +  L
Sbjct: 328 EDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCIL 387

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++  A   F++M+         AY   I GLCK   + EA ELF  L +   
Sbjct: 388 LHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGV 447

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           + D R Y  +I GLCK+G  + A ELFR +    +I
Sbjct: 448 KPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 190/370 (51%), Gaps = 11/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLC--RTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +A  LF+++      P+V  +  L+  +   R   T++  +   E+      FG+    +
Sbjct: 48  DALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMEL------FGI--SHD 99

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             ++T +I   C+   +  A  +  KM     +P++VT+ SL+HGFC  N  ++A  L  
Sbjct: 100 LYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVA 159

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLT 178
            M+  G +PNVV +N +++ LCKNG ++ A  LL  M + G +  +   YNTL+ G C +
Sbjct: 160 SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYS 219

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G   +A  +   M       +VF+++ LI+ + K   ++ A  LY +ML   I P+ V Y
Sbjct: 220 GEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTY 279

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L  GL    ++  A K FD M   G   +   Y T I+G CK+  + + ++LF+ +  
Sbjct: 280 NSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYR 339

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D   YN LI G C+ G+L++A ++F  +    +  D++T+ I++H LC +G++  
Sbjct: 340 EGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGS 399

Query: 359 ARDLFLDMEA 368
           A   F DM +
Sbjct: 400 AMVKFNDMRS 409



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 164/319 (51%), Gaps = 7/319 (2%)

Query: 52  FGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           FG+ C+       P+ V +T ++  + K    D    LF KM++  I+ ++ ++  LIH 
Sbjct: 600 FGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHC 659

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           FC  + ++ A  L  +MM  G QP++V+   ++N  C+  +  EA  L++ M ++G+ PN
Sbjct: 660 FCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPN 719

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YNT+++G C    +N A E+F  ME  G   +  +Y+ LI+G C +     A  L  
Sbjct: 720 VVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLR 779

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M+ + I P+V+ +  L     +   +  A  L+ EM R  V  +   Y + I+G C  G
Sbjct: 780 DMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQG 839

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + +A  +F  +       D+  YN LI G CKS R++   +LF  +    L+ D  TYN
Sbjct: 840 RLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYN 899

Query: 345 IMIHALCADGKMDKARDLF 363
            +IH  C  GK++ A+ +F
Sbjct: 900 TLIHGYCQAGKLNVAQKVF 918



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 153/323 (47%), Gaps = 36/323 (11%)

Query: 77  DKAKELFLKMKDENINPNVV-----------------------------------TYNSL 101
           + A +LFL+M      P+VV                                   ++  L
Sbjct: 47  EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           IH FC  +  + A  +  +MM  G  P++V+F  +++  C   ++ +A  L+  M++ G 
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGAL 220
            PN  VYNTL+D  C  G VN A EL   ME  G    ++ +Y+ L+ G C + E   A 
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  +M  + I PDV  +  L     +   ++ A +L+ +M +  +  +T  Y + I+GL
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGL 286

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           C +G +  A + F  +       ++  YN LI+G CKS R++   +LF+ + R  L+ D 
Sbjct: 287 CMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDT 346

Query: 341 VTYNIMIHALCADGKMDKARDLF 363
            TYN +IH  C  GK+  A+D+F
Sbjct: 347 FTYNTLIHGYCQVGKLRVAKDIF 369



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 188/425 (44%), Gaps = 61/425 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP--- 58
           EA  LF +L V G +P+  TY  +I GLC+ G    A  LF  M     E G++C+    
Sbjct: 434 EAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMK----EDGIICQAEDG 489

Query: 59  --------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV-----TYNSLIHGF 105
                   N V+  TII    +   + ++ +L+    D  +  ++V       +S + GF
Sbjct: 490 HLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTLWSSLVGLIPIASSSSVKGF 549

Query: 106 CYAN-----------------------------------------DWNEAKCLFIEMMDQ 124
              +                                          +++A  LF EM+  
Sbjct: 550 VRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSELHCIKFDDAFGLFCEMLQS 609

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
              P++V F  ++  + K  K D    L   M  +G+  + + +  L+  FC   R + A
Sbjct: 610 RPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLA 669

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M  +G + ++ +   L+NG+C+    + A+SL   M   G++P+VVIYNT+  G
Sbjct: 670 LALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVING 729

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +   +  A ++F  M++ G+ AD   Y T I GLC +G   +A  L R +   K + +
Sbjct: 730 LCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPN 789

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  +  LID   K G L  A  L++ + R  +  +++TYN +I+  C  G++  A+ +F 
Sbjct: 790 VIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFD 849

Query: 365 DMEAK 369
            M +K
Sbjct: 850 LMVSK 854



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 144/290 (49%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A  LF +M      P++V +  ++      N ++    LF +M + G+  ++ SF ++
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTIL 656

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  C+  +   A  LL  M+++G +P+     +L++GFC   R   A  L  SM  +G 
Sbjct: 657 IHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGL 716

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV  Y+ +ING CKN+++  AL ++  M  KGI  D V YNTL  GL    +   A +
Sbjct: 717 EPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAAR 776

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M +  +  +   +   ID   K G ++EA  L++ +       +I  YN LI+G C
Sbjct: 777 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFC 836

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             GRL  A  +F  +       DVVTYN +I   C   +++    LF +M
Sbjct: 837 IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 886



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 149/295 (50%), Gaps = 10/295 (3%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +AA L   +     +PNV  +  LI+   + G+ + A NL++EM   +        PN +
Sbjct: 773  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRS------VHPNIL 826

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY ++I+G C +G +  AK +F  M  +   P+VVTYN+LI GFC +    +   LF EM
Sbjct: 827  TYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 886

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              QG+  +  ++N +++  C+ GK++ A ++   M+  GV P+   YN L+D  C  G++
Sbjct: 887  THQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKI 946

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             +A  +   ++      ++ +Y+I+I G C+N +++ A  L+  +  KG+K D + Y T+
Sbjct: 947  EKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITM 1006

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              GL        A KL   M+  G       Y    D   ++ Y   + EL + +
Sbjct: 1007 ISGLCRNGLRREADKLCTRMKEDGFMPSERIY----DETLRDHYTSLSAELIKAV 1057



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 131/239 (54%), Gaps = 6/239 (2%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  L+ ++      PN+ TYN+LING C  G    A ++F+ M +        C P+ 
Sbjct: 807  LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG------CFPDV 860

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            VTY T+I G CK   V+   +LF +M  + +  +  TYN+LIHG+C A   N A+ +F  
Sbjct: 861  VTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 920

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+D GV P++V++N++++ LC NGK+++A  ++E + +  +  +   YN ++ G C   +
Sbjct: 921  MVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDK 980

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V  A  LF S+   G K +  +Y  +I+G C+N     A  L + M   G  P   IY+
Sbjct: 981  VKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYD 1039



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 136/267 (50%), Gaps = 1/267 (0%)

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           GF ++  + +A  LF+EM+     P+VV F  ++  +    + +      + M   G+  
Sbjct: 39  GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   R++ A  +   M  +G   ++ ++  L++G+C    I  A SL 
Sbjct: 99  DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCK 282
           + M+  G +P+VV+YNTL   L +   V  A +L +EM++ G +AAD   Y T + GLC 
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +G   +A  + R +   +   D+  +  LID   K G L  A EL++ + +  +  + VT
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           YN +I+ LC  G++  A+  F  M +K
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASK 305



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 76/164 (46%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L  G+  +   E AL L+ EM+     P VV +  L   +  + + E       +M+  G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           ++ D +++   I   C+   +  A+ +   +  L Y+  I  +  L+ G C   R+  A+
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  S+ +     +VV YN +I  LC +G ++ A +L  +ME K
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKK 199


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 133/361 (36%), Positives = 204/361 (56%), Gaps = 13/361 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN  TYNTL+N L   G +  A +L E+MA  NG     C P  +T+  II GLCKE
Sbjct: 131 GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMA-ANG-----CPPELITFGLIIKGLCKE 184

Query: 74  GFVDKA----KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           G ++ A     E+F  M +  ++P+V+T+NS++ G C      +A  +F   +++G +PN
Sbjct: 185 GEIEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 242

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+++ +++ L K  KMDEA +LL  M+++G R N   Y+T++DG    GR+  A  +  
Sbjct: 243 VVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLR 302

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   GC  +  +Y+ LI+G+ K + +  A+ L  EML  G  P VV Y TL  GL    
Sbjct: 303 QMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSG 362

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKYELDIRAY 308
           + + A ++ D M   G A +   Y + +DGLCK G + EA+  F  + R       + AY
Sbjct: 363 RFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAY 422

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           + LIDGLCK+G++  A+E    + R   I DVVT++I+I+ LC  G++D   +LF  M  
Sbjct: 423 SALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482

Query: 369 K 369
           +
Sbjct: 483 R 483



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 193/373 (51%), Gaps = 13/373 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++      P+V TY  LI+GL +      A +LFEE A   G     C P  V
Sbjct: 13  KAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEE-ARAKG-----CHPTVV 66

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY T+IDGLCK G ++ A  L+  M       P VVTY++LI G C  ++ ++   L  E
Sbjct: 67  TYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEE 126

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  PN V++N ++N L   G+  EA  LLE M   G  P    +  ++ G C  G 
Sbjct: 127 MAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGE 186

Query: 181 VNRA----EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           +  A    +E+F  M   G   +V +++ +++G CK + I  A +++   L +G +P+VV
Sbjct: 187 IEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVV 244

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y+TL  GL ++ +++ A +L  +M   G  A+T  Y T +DGL K G + +AV + R +
Sbjct: 245 TYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQM 304

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R      D   YN LIDG  K  RL+ A  L R +        VVTY  + H LC  G+ 
Sbjct: 305 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRF 364

Query: 357 DKARDLFLDMEAK 369
           D+A ++   M A+
Sbjct: 365 DEAVEILDYMAAR 377



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 172/322 (53%), Gaps = 9/322 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  +F +    GC PNV TY+TLI+GL +      AL L  +M     E G  C+ NT
Sbjct: 225 LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV----ELG--CRANT 278

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T++DGL K G ++ A  +  +M+D    P+ VTYN+LI GF       EA  L  E
Sbjct: 279 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 338

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G  P+VV++  + + LC++G+ DEA  +L+ M   G  PNA  Y++++DG C  GR
Sbjct: 339 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 398

Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           V  A   F  M  + +   H V +YS LI+G CK  +I+ A      M+  G  PDVV +
Sbjct: 399 VTEALGYFEKMARDEVVAPH-VIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTF 457

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           + L  GL +  +++   +LF  M   G   D   Y T +D LC+   + EA +LF+ +R 
Sbjct: 458 SILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRS 517

Query: 299 LKYELDIRAYNCLIDGLCKSGR 320
                D      +I GL +  R
Sbjct: 518 DGLSPDRSTRRTMIHGLLEVNR 539



 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 109/338 (32%), Positives = 179/338 (52%), Gaps = 7/338 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V T+N++++GLC+    + A N+F+       E G  C+PN VTY+T+IDGL K 
Sbjct: 203 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRAL----ERG--CRPNVVTYSTLIDGLSKM 256

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A +L  KM +     N VTY++++ G        +A  +  +M D G  P+ V++
Sbjct: 257 AKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTY 316

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++   K  ++ EA  LL  M++ G  P+   Y TL  G C +GR + A E+   M +
Sbjct: 317 NTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAA 376

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVE 252
            GC  N  +YS +++G CK   +  AL  + +M   + + P V+ Y+ L  GL +  +++
Sbjct: 377 RGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKID 436

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A++  + M R G   D   +   I+GLC  G I   +ELFR +       D+  Y  L+
Sbjct: 437 EAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLV 496

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           D LC++ R+  A++LF+ +    L  D  T   MIH L
Sbjct: 497 DRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 145/260 (55%), Gaps = 7/260 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++R  GC P+  TYNTLI+G  +      A+ L  EM     E G    P+ V
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML----EAGF--HPSVV 349

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+  GLC+ G  D+A E+   M      PN +TY+S++ G C A    EA   F +M
Sbjct: 350 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 409

Query: 122 M-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             D+ V P+V++++ +++ LCK GK+DEA   LE MI+ G  P+   ++ L++G C  GR
Sbjct: 410 ARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 469

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++   ELF  M   GC  ++ +Y+ L++  C+   ++ A  L+ +M S G+ PD     T
Sbjct: 470 IDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRT 529

Query: 241 LFIGLFEIHQVERAFKLFDE 260
           +  GL E+++ E A ++ DE
Sbjct: 530 MIHGLLEVNRDEDAKRIQDE 549



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 1/164 (0%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G CK+++++ A++L+ +M+ K I PDVV Y  L  GL +  +V+ A+ LF+E +  G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-LKYELDIRAYNCLIDGLCKSGRLKIA 324
                  Y T IDGLCK G I  A+ L+  + I   +   +  Y+ LIDGLC+   +   
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +L   +       + VTYN +++AL   G+  +A  L   M A
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAA 164



 Score = 43.9 bits (102), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 34/59 (57%)

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +IDGLCKS ++  A  LF+ +    +  DVVTY  +I  L    ++ +A DLF +  AK
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 59


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/359 (36%), Positives = 201/359 (55%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           KL   G   +  +Y TLINGLC+ G T  AL L   +       G + + + V Y+TIID
Sbjct: 165 KLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVD------GKLVQLDVVMYSTIID 218

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            +CK+  V+ A +L+ +M    I+ N+VTY++LI GFC      +A  LF +M  + + P
Sbjct: 219 SMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINP 278

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +V +FN++++  CK G++ EA   L +M++ G++P+   YN+LMDG+CL   VN A+ + 
Sbjct: 279 DVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSIL 338

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            +M   G    V SY+I+ING+CK K ++ A+ L+ EM  K I P+V+ YN+L  GL + 
Sbjct: 339 NTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKS 398

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A +L D M   G   D   Y + +D LCKN  + +A+ L   L+      ++  Y
Sbjct: 399 GRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTY 458

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             LIDGLCK GRL+ A  +F  L        V TY +MI   C+ G  D+A  L   M+
Sbjct: 459 TILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMK 517



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP+  T NT I G C  G    ALN  +++        +    + V+
Sbjct: 124 AFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV------ALGFHLDQVS 177

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+GLCK G    A EL  ++  + +  +VV Y+++I   C   + N+A  L+ EM+
Sbjct: 178 YGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMV 237

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + +  N+V+++ +++  C  GK+ +A  L   M    + P+ + +N L+D FC  GRV 
Sbjct: 238 SRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVK 297

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+     M   G K ++ +Y+ L++GYC   E+  A S+ + M  +G+   V  YN + 
Sbjct: 298 EAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVI 357

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +I  V++A KLF EM    +  +   Y + IDGLCK+G I  A+EL   +     +
Sbjct: 358 NGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQ 417

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            DI  Y+ ++D LCK+  +  A  L   L    +  ++ TY I+I  LC  G+++ AR++
Sbjct: 418 PDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNI 477

Query: 363 FLDMEAK 369
           F D+  K
Sbjct: 478 FEDLLVK 484



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 177/365 (48%), Gaps = 41/365 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++       N+ TY+ LI+G C  G    A+ LF +M + N        P+  
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSEN------INPDVY 281

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D  CKEG V +AK     M  + I P++VTYNSL+ G+C  N+ N AK +   M
Sbjct: 282 TFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTM 341

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV   V S+N+++N  CK   +D+A +L + M    + PN   YN+L+DG C +GR+
Sbjct: 342 SHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRI 401

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M   G + ++ +YS +++  CKN  ++ A++L  ++  +GI+P++  Y  L
Sbjct: 402 SYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTIL 461

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                                              IDGLCK G + +A  +F  L +  Y
Sbjct: 462 -----------------------------------IDGLCKGGRLEDARNIFEDLLVKGY 486

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L +  Y  +I G C  G    A  L   +     I D +TY I+I +L    + DKA  
Sbjct: 487 NLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEK 546

Query: 362 LFLDM 366
           L  +M
Sbjct: 547 LLREM 551



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 174/376 (46%), Gaps = 51/376 (13%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P++ TYN+L++G C        +N+ + + N     GV       +Y  +I+G CK 
Sbjct: 310 GIKPDIVTYNSLMDGYCLVNE----VNMAKSILNTMSHRGVTA--TVRSYNIVINGFCKI 363

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A +LF +M  + I PNV+TYNSLI G C +   + A  L   M D+G QP+++++
Sbjct: 364 KMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITY 423

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I++ LCKN  +D+A  LL  +   G+RPN + Y  L+DG C  GR+  A  +F  +  
Sbjct: 424 SSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLV 483

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    V +Y+++I G+C +   + ALSL S+M      PD + Y  +   LF+  + ++
Sbjct: 484 KGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDK 543

Query: 254 AFKLFDEMQRHGV---------------------------------AADTWAY----RTF 276
           A KL  EM   G+                                  +  WA     R +
Sbjct: 544 AEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLERIY 603

Query: 277 IDGLCKNGYIVE------AVELFRTLRILK--YELDIRAYNCLIDGLCKSGRLKIAWELF 328
            D +     + +      +V ++ T    K  Y LD+  Y  +I G C  G    +  L 
Sbjct: 604 CDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCSHGLFDESLALL 663

Query: 329 RSLPRGVLIADVVTYN 344
             +     I D VTY+
Sbjct: 664 SKMEVNGCIPDAVTYD 679



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 179/362 (49%), Gaps = 6/362 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A +LF  L      P    +  ++  L ++ H    L+LF++M     E+  + KPN 
Sbjct: 52  VDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKM-----EYRGI-KPNF 105

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V +  +I+  C+ G +  A  +  K+      P+ +T N+ I GFC     ++A     +
Sbjct: 106 VNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDK 165

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++  G   + VS+  ++N LCK G+   A  LL  +    V+ +  +Y+T++D  C    
Sbjct: 166 LVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKN 225

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           VN A +L+  M S     N+ +YS LI+G+C   +++ A+ L+++M S+ I PDV  +N 
Sbjct: 226 VNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNI 285

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +  +V+ A      M + G+  D   Y + +DG C    +  A  +  T+    
Sbjct: 286 LVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRG 345

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
               +R+YN +I+G CK   +  A +LF+ +    +  +V+TYN +I  LC  G++  A 
Sbjct: 346 VTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYAL 405

Query: 361 DL 362
           +L
Sbjct: 406 EL 407



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 147/291 (50%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A  LF  +  +N  P  + +  ++     +  ++    LF +M  +G++PN V+FN+++N
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
             C+ G +  A  +L  ++++G  P+    NT + GFCL G++++A      + ++G   
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +  SY  LING CK  E   AL L   +  K ++ DVV+Y+T+   + +   V  AF L+
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            EM    ++++   Y   I G C  G + +A+ LF  +       D+  +N L+D  CK 
Sbjct: 234 SEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKE 293

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GR+K A      + +  +  D+VTYN ++   C   +++ A+ +   M  +
Sbjct: 294 GRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHR 344



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 131/271 (48%), Gaps = 6/271 (2%)

Query: 97  TYNSLIHGFCYA------NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           T+   IH F  +      ND  +A  LF  ++ Q   P  + F  I+  L K+       
Sbjct: 31  THFYFIHSFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVL 90

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L + M   G++PN   +N L++ FC  G +  A  +   +  MG + +  + +  I G+
Sbjct: 91  SLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGF 150

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C   +I  AL+ + ++++ G   D V Y TL  GL ++ +   A +L   +    V  D 
Sbjct: 151 CLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDV 210

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y T ID +CK+  + +A +L+  +   +   +I  Y+ LI G C  G+LK A  LF  
Sbjct: 211 VMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNK 270

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +    +  DV T+NI++ A C +G++ +A++
Sbjct: 271 MTSENINPDVYTFNILVDAFCKEGRVKEAKN 301



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/325 (27%), Positives = 146/325 (44%), Gaps = 52/325 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++      PNV TYN+LI+GLC++G    AL L + M +  G+     +P+ +
Sbjct: 368 QAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHD-RGQ-----QPDII 421

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++I+D LCK   VDKA  L +K+KD+ I PN+ TY  LI G C      +A+ +F ++
Sbjct: 422 TYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDL 481

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G    V ++ V++   C +G  DEA  LL  M      P+A  Y  ++         
Sbjct: 482 LVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDEN 541

Query: 182 NRAEELFVSMESMGCKHNVFSY-----------SILING---YCKNKEIEGALS------ 221
           ++AE+L   M + G  ++   Y           +  +N     C + +  G  +      
Sbjct: 542 DKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQESGNWAKLLLER 601

Query: 222 LY-------SEMLSKGIK-PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           +Y       S M  K ++ P V+IY+T                   +  + G   D   Y
Sbjct: 602 IYCDCVLTKSNMRDKDVECPSVIIYSTC------------------DWSKQGYILDVNTY 643

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRI 298
              I G C +G   E++ L   + +
Sbjct: 644 TVMIQGFCSHGLFDESLALLSKMEV 668



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/227 (27%), Positives = 111/227 (48%)

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
           N  + +A  L   +++    P    +  ++     +   +    LF  ME  G K N  +
Sbjct: 48  NNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVN 107

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++ILIN +C+   I  A S+ +++L  G +PD +  NT   G     Q+ +A    D++ 
Sbjct: 108 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLV 167

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G   D  +Y T I+GLCK G    A+EL R +     +LD+  Y+ +ID +CK   + 
Sbjct: 168 ALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVN 227

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A++L+  +    + +++VTY+ +I   C  GK+  A  LF  M ++
Sbjct: 228 DAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSE 274


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 207/366 (56%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A+    K+   G EP++ T+ +L+NG C       A+ LF+++       G+  KPN V
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI------LGMGFKPNVV 189

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I  LCK   ++ A ELF +M      PNVVTYN+L+ G C    W +A  L  +M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M + ++PNV++F  +++   K GK+ EA  L  +MIQ+ V P+ F Y +L++G C+ G +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  ME  GC  N   Y+ LI+G+CK+K +E  + ++ EM  KG+  + + Y  L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + + + A ++F++M       D   Y   +DGLC NG + +A+ +F  +R  + 
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +++I  Y  +I G+CK G+++ A++LF SL    +  +V+TY  MI   C  G + +A  
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489

Query: 362 LFLDME 367
           LF  M+
Sbjct: 490 LFKKMK 495



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF ++++ G  P + T N +++ +C +     A     +M     E      P+ VT+T
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE------PDLVTFT 157

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++++G C    ++ A  LF ++      PNVVTY +LI   C     N A  LF +M   
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +PNVV++N ++  LC+ G+  +A+ LL  M++  + PN   +  L+D F   G++  A
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +EL+  M  M    +VF+Y  LING C    ++ A  ++  M   G  P+ VIY TL  G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  +VE   K+F EM + GV A+T  Y   I G C  G    A E+F  +   +   D
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           IR YN L+DGLC +G+++ A  +F  + +  +  ++VTY I+I  +C  GK++ A DLF 
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457

Query: 365 DMEAK 369
            + +K
Sbjct: 458 SLFSK 462



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 170/332 (51%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL+LF  M +          P+ + +T ++  + K    D    LF +M+   I P + T
Sbjct: 67  ALDLFTRMVHSRP------LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            N ++H  C ++    A C   +MM  G +P++V+F  ++N  C   ++++A  L + ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G +PN   Y TL+   C    +N A ELF  M + G + NV +Y+ L+ G C+     
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ + I+P+V+ +  L     ++ ++  A +L++ M +  V  D + Y + I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC  G + EA ++F  +       +   Y  LI G CKS R++   ++F  + +  ++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A+ +TY ++I   C  G+ D A+++F  M ++
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 140/302 (46%), Gaps = 29/302 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
            A  LF ++   G  PNV TYN L+ GLC  G    A  L  +M     E  V+      
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    P+  TY ++I+GLC  G +D+A+++F  M+     
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN V Y +LIHGFC +    +   +F EM  +GV  N +++ V++   C  G+ D A  +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M      P+   YN L+DG C  G+V +A  +F  M       N+ +Y+I+I G CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++E A  L+  + SKG+KP+V+ Y T+  G      +  A  LF +M+  G   +   
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505

Query: 273 YR 274
           Y+
Sbjct: 506 YK 507



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 6/238 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L+  +      P+VFTY +LINGLC  G    A  +F  M   NG     C PN 
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNE 328

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YTT+I G CK   V+   ++F +M  + +  N +TY  LI G+C     + A+ +F +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +   P++ ++NV+++ LC NGK+++A  + E M +  +  N   Y  ++ G C  G+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           V  A +LF S+ S G K NV +Y+ +I+G+C+   I  A SL+ +M   G  P+  +Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 138/271 (50%)

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           +Y  ++    +   +N+A  LF  M+     P+++ F  +++ + K  + D    L E M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
             +G+ P     N +M   CL+ +  RA      M  +G + ++ +++ L+NGYC    I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A++L+ ++L  G KP+VV Y TL   L +   +  A +LF++M  +G   +   Y   
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           + GLC+ G   +A  L R +   + E ++  +  LID   K G+L  A EL+  + +  +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDME 367
             DV TY  +I+ LC  G +D+AR +F  ME
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLME 320


>gi|356529360|ref|XP_003533262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  244 bits (624), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 143/370 (38%), Positives = 205/370 (55%), Gaps = 10/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  K+   G   N  TY  L+NGLC+ G T  AL   ++M   N        PN V
Sbjct: 163 HALWLVEKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRN------LGPNVV 216

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA-NDWNEAKCLFIE 120
            Y  I+DGLCK G V +A  L  +M   N+ PNVVTYN LI G C     W E   LF E
Sbjct: 217 VYNAILDGLCKRGLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNE 276

Query: 121 MM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+ ++G+ P+V +F+++++  CK G +  A  ++  M++IGV PN   YN+L+ G+CL  
Sbjct: 277 MVAEKGIVPDVQTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRS 336

Query: 180 RVNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           ++  A  +F  M  E  GC  +V +++ LI+G+CK KE++ A+SL SEM+ KG+ PDV  
Sbjct: 337 QMEEAMRVFGLMVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFT 396

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           + +L  G  E+ +   A +LF  M+ HG   +       +DGL K     EAV LFR + 
Sbjct: 397 WTSLIGGFCEVKKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMM 456

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +LDI  YN ++DG+CK G+L  A +L   +    L  D  TYNIMI  LC +G +D
Sbjct: 457 KSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLD 516

Query: 358 KARDLFLDME 367
            A +L   M+
Sbjct: 517 DAEELLRKMK 526



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 188/355 (52%), Gaps = 8/355 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLC-RTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EA  L  ++ V   EPNV TYN LI GLC   G     + LF EM     E G+V  P+ 
Sbjct: 233 EALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMV---AEKGIV--PDV 287

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T++ ++DG CKEG + +A+ +   M    + PNVVTYNSLI G+C  +   EA  +F  
Sbjct: 288 QTFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVFGL 347

Query: 121 MM--DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           M+   +G  P+VV+ N +++  CK  ++D+A  LL  M+  G+ P+ F + +L+ GFC  
Sbjct: 348 MVREGEGCLPSVVTHNSLIHGWCKVKEVDKAMSLLSEMVGKGLDPDVFTWTSLIGGFCEV 407

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            +   A ELF +M+  G   N+ + +++++G  K      A++L+  M+  G+  D+VIY
Sbjct: 408 KKPLAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIY 467

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N +  G+ ++ ++  A KL   +   G+  D++ Y   I GLC+ G + +A EL R ++ 
Sbjct: 468 NIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKE 527

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
                +  +YN  + GL +   +  + +  + +       D  T  ++I  L A+
Sbjct: 528 NGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDATTAELLIRFLSAN 582



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 120/237 (50%), Gaps = 2/237 (0%)

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +V + N+ +N LC   K      +L LM +IG+ P     NT+++G C+ G VN A  L 
Sbjct: 109 DVCTLNIAINCLCHMRKTTLGFAVLGLMTKIGLEPTLVTLNTIVNGLCIEGDVNHALWLV 168

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ME++G   N  +Y  L+NG CK  +  GAL    +M+ + + P+VV+YN +  GL + 
Sbjct: 169 EKMENLGYHCNARTYGALVNGLCKIGDTSGALECLKKMVKRNLGPNVVVYNAILDGLCKR 228

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEAVELFRTLRILKYEL-DIR 306
             V  A  L  EM    V  +   Y   I GLC   G   E V LF  +   K  + D++
Sbjct: 229 GLVGEALGLLHEMGVVNVEPNVVTYNCLIQGLCGEFGGWREGVGLFNEMVAEKGIVPDVQ 288

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ++ L+DG CK G L  A  +   + R  +  +VVTYN +I   C   +M++A  +F
Sbjct: 289 TFSILVDGFCKEGLLLRAESVVGFMVRIGVEPNVVTYNSLIAGYCLRSQMEEAMRVF 345



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 104/214 (48%), Gaps = 6/214 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  ++   G +P+VFT+ +LI G C     + A  LF  M     E G V  PN  
Sbjct: 377 KAMSLLSEMVGKGLDPDVFTWTSLIGGFCEVKKPLAARELFFTMK----EHGQV--PNLQ 430

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   ++DGL K     +A  LF  M    ++ ++V YN ++ G C     N+A+ L   +
Sbjct: 431 TCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSCV 490

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++ +  ++N+++  LC+ G +D+A  LL  M + G  PN   YN  + G      +
Sbjct: 491 LVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDI 550

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
            R+ +    M+  G   +  +  +LI     N+E
Sbjct: 551 ARSRKYLQIMKDKGFPVDATTAELLIRFLSANEE 584



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 79/165 (47%), Gaps = 6/165 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  LF  ++  G  PN+ T   +++GL +      A+ LF  M     +  +      
Sbjct: 411 LAARELFFTMKEHGQVPNLQTCAVVLDGLLKCWLDSEAVTLFRAMMKSGLDLDI------ 464

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  ++DG+CK G ++ A++L   +  + +  +  TYN +I G C     ++A+ L  +
Sbjct: 465 VIYNIMLDGMCKMGKLNDARKLLSCVLVKGLKIDSYTYNIMIKGLCREGLLDDAEELLRK 524

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           M + G  PN  S+NV +  L +   +  + + L++M   G   +A
Sbjct: 525 MKENGCPPNKCSYNVFVQGLLRKYDIARSRKYLQIMKDKGFPVDA 569



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 1/165 (0%)

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +++L     K++    A+SL   + S G    DV   N     L  + +    F +   M
Sbjct: 77  FNLLFGLVAKSQHYATAISLIKILHSLGDGSADVCTLNIAINCLCHMRKTTLGFAVLGLM 136

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            + G+        T ++GLC  G +  A+ L   +  L Y  + R Y  L++GLCK G  
Sbjct: 137 TKIGLEPTLVTLNTIVNGLCIEGDVNHALWLVEKMENLGYHCNARTYGALVNGLCKIGDT 196

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             A E  + + +  L  +VV YN ++  LC  G + +A  L  +M
Sbjct: 197 SGALECLKKMVKRNLGPNVVVYNAILDGLCKRGLVGEALGLLHEM 241


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 130/357 (36%), Positives = 203/357 (56%), Gaps = 6/357 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GC PNV TYNTL+   CR G    A  L   M  G    GV  +P+ VT+ T+++G
Sbjct: 181 MRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREG----GV--RPSLVTFNTVVNG 234

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK G ++ A+++F +M  E + P+ V+YN+L+ G+C A   +EA  +F EM  +GV P+
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+F  +++ +C+ G ++ A  L+  M + G+R N F +  L+DGFC  G ++ A     
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M     + +V  Y++LINGYCK   ++ A  L  EM +KG+KPDVV Y+T+  G  +I 
Sbjct: 355 EMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
             + AF+L  +M + GV  D   Y + I GLC+   + +A ELF  +  L  + D   Y 
Sbjct: 415 DTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYT 474

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LIDG CK G ++ A  L   + +  ++ DVVTY+++I  L    +  +A+ L   +
Sbjct: 475 TLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/347 (32%), Positives = 188/347 (54%), Gaps = 21/347 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A+F ++   G  P+V T+ +LI+ +CR G+   A+ L  +M     E G+  + N  
Sbjct: 278 EALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMR----ERGL--RMNEF 331

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDG C+ GF+D A     +M++  I P+VV YN LI+G+C     +EA+ L  EM
Sbjct: 332 TFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEM 391

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+VV+++ I++  CK G  D A  L   M++ GV P+A  Y++L+ G C   R+
Sbjct: 392 EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRL 451

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ELF  M  +G + + F+Y+ LI+G+CK   ++ ALSL+ EM+ KG+ PDVV Y+ L
Sbjct: 452 GDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVL 511

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR---------------TFIDGLCKNGYI 286
             GL +  + + A +L  ++       D   Y                  + G    G +
Sbjct: 512 IDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKSVVALLKGFSMKGLM 571

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            +A ++++++    ++LD   Y+ LI G C+ G +  A    + L R
Sbjct: 572 NQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLR 618



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 166/306 (54%), Gaps = 2/306 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA-KC 116
           P+ + Y  ++  L  +  +  A+ L   M  + + PNV TYN L+   C      EA   
Sbjct: 118 PSLLAYNAVLLAL-SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV 176

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M   G  PNVV++N ++   C+ G++D A RL+ +M + GVRP+   +NT+++G C
Sbjct: 177 VGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLC 236

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  A ++F  M   G   +  SY+ L++GYCK   +  AL++++EM  KG+ PDVV
Sbjct: 237 KAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVV 296

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + +L   +     +ERA  L  +M+  G+  + + +   IDG C+NG++ +A+   + +
Sbjct: 297 TFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEM 356

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R  + +  +  YN LI+G CK GR+  A EL   +    +  DVVTY+ ++   C  G  
Sbjct: 357 RECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDT 416

Query: 357 DKARDL 362
           D A +L
Sbjct: 417 DSAFEL 422



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 148/292 (50%), Gaps = 21/292 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +P+V TY+T+++G C+ G T  A  L  +M       GVV  P+ +
Sbjct: 383 EARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK----GVV--PDAI 436

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I GLC+E  +  A ELF KM    + P+  TY +LI G C   +  +A  L  EM
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM--------- 172
           + +GV P+VV+++V+++ L K+ +  EA RLL  +      P+   Y  LM         
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFK 556

Query: 173 ------DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GF + G +N+A++++ SM     K +   YS+LI+G+C+   I  ALS + ++
Sbjct: 557 SVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQL 616

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           L  G  P+     +L  GLFE      A  +  E+      AD    +  ID
Sbjct: 617 LRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALID 668


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  243 bits (621), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 196/341 (57%), Gaps = 6/341 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+ + +N LI    + G    A+  F +M            PN VTY T++D LC+ 
Sbjct: 341 GTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQG------LHPNIVTYGTVMDALCRV 394

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F ++  E + PN V + +LIHG C  + W++A+ L +EM+ +G+ PN + F
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LCK G +  A  + +LM+++ V+ +   Y TL+DG+CL G+V+ A +L   M  
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVL 514

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K N  +Y+ +INGYCKN  IE A SL+ +M SKG+ P +VIY+T+  GLF+  ++  
Sbjct: 515 DGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAA 574

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M + G+      Y   + GLC+N    +A+ +F  L ++ + L  R +N +ID
Sbjct: 575 AKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMID 634

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L K GR   A +LF SL    L+ +VVTY +M+ +L   G
Sbjct: 635 ALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 675



 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 202/358 (56%), Gaps = 2/358 (0%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   GC PN F+YN L+ GLC    +  AL+L   M   +   G  C P+ V+YTT+I+
Sbjct: 157 RMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGG--CPPDVVSYTTVIN 214

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GL +EG +DKA  LF +M D+ ++PN +TYN L+HG+C +    EA  +F +M   GV+P
Sbjct: 215 GLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEP 274

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +VV++N +M  LCKNG+  EA ++ + M++ G +P++ +Y TL+ G+   G + +  +L 
Sbjct: 275 DVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLL 334

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G + + + ++ILI  Y K+  ++ A+  +S+M  +G+ P++V Y T+   L  +
Sbjct: 335 DVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRV 394

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +V+ A   FD +   G+  +   +RT I GLC      +A EL   +       +   +
Sbjct: 395 GKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFF 454

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N L++ LCK G +  A  +F  + R  +  DV+TY  +I   C DGK+D+A  L   M
Sbjct: 455 NTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGM 512



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  PN  TYN L++G C +G    A+ +F +M     E      P+ V
Sbjct: 224 KAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVE------PDVV 277

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++  LCK G   +A+++F  M  +   P+   Y +L+HG+       +   L   M
Sbjct: 278 TYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVM 337

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QP+   FN+++    K+G +DEA      M Q G+ PN   Y T+MD  C  G+V
Sbjct: 338 VRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKV 397

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   F  + S G   N   +  LI+G C   + + A  L  EM+ +GI P+ + +NTL
Sbjct: 398 DDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTL 457

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   V RA  +FD M R  V  D   Y T IDG C +G + EA +L   + +   
Sbjct: 458 LNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGV 517

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +   YN +I+G CK+GR++ A  LFR +    +   +V Y+ ++H L    ++  A++
Sbjct: 518 KPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKE 577

Query: 362 LFLDM 366
           L+L M
Sbjct: 578 LYLWM 582



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+   G EP+V TYNTL+  LC+ G ++ A  +F+ M           KP++ 
Sbjct: 259 EAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGH------KPDSS 312

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ G   EG++ +  +L   M      P+   +N LI  +      +EA   F +M
Sbjct: 313 IYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKM 372

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN+V++  +M+ LC+ GK+D+A    + +I  G+ PN  V+ TL+ G C   + 
Sbjct: 373 RQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKW 432

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++AEEL V M   G   N   ++ L+N  CK   +  A +++  M+   ++ DV+ Y TL
Sbjct: 433 DKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTL 492

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +V+ A KL + M   GV  +   Y T I+G CKNG I +A  LFR +     
Sbjct: 493 IDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGV 552

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              I  Y+ ++ GL ++ R+  A EL+  + +  +   + TYNI++  LC +   D A  
Sbjct: 553 NPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALR 612

Query: 362 LFLDM 366
           +F ++
Sbjct: 613 MFHNL 617



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 167/352 (47%), Gaps = 64/352 (18%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCK--- 57
           EA   F K+R  G  PN+ TY T+++ LCR G    A++ F+ + + G    GVV +   
Sbjct: 364 EAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLI 423

Query: 58  -------------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    PNT+ + T+++ LCKEG V +AK +F  M   ++ 
Sbjct: 424 HGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQ 483

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            +V+TY +LI G+C     +EA  L   M+  GV+PN V++N I+N  CKNG++++A  L
Sbjct: 484 CDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSL 543

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M   GV P   +Y+T++ G   T R+  A+EL++ M   G K  + +Y+I++ G C+
Sbjct: 544 FRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQ 603

Query: 213 NKEIEGAL-----------------------------------SLYSEMLSKGIKPDVVI 237
           N   + AL                                    L++ +L++G+ P+VV 
Sbjct: 604 NNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVT 663

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           Y  +   L E   +E    LF  ++++G  AD+      +  L + G + +A
Sbjct: 664 YWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLPQKGEVRKA 715



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 152/356 (42%), Gaps = 49/356 (13%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           ++F  N+ ++ + R     VAL+LF  M           + +  TY+ +I    + G +D
Sbjct: 65  SIFDLNSALSAVARES-PAVALSLFNRMP----------RADLCTYSIVIGCCSRAGHLD 113

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A     ++         +T++ L+ G C+    ++A                       
Sbjct: 114 LAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDA----------------------- 150

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES---- 193
                   MD A   L  M  +G  PNAF YN L+ G C   R  +A  L  +M +    
Sbjct: 151 --------MDIA---LRRMPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTR 199

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V SY+ +ING  +  +++ A  L+ EML +G+ P+ + YN L  G     + + 
Sbjct: 200 GGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKE 259

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +F +M R GV  D   Y T +  LCKNG  +EA ++F ++    ++ D   Y  L+ 
Sbjct: 260 AIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLH 319

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G    G L    +L   + R     D   +NI+I A    G +D+A   F  M  +
Sbjct: 320 GYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQ 375


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  243 bits (621), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 125/341 (36%), Positives = 198/341 (58%), Gaps = 6/341 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+ + +N LI    + G    A+ LF +M            P+TVTY  ++D LC  
Sbjct: 373 GIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQG------LNPDTVTYGIVMDALCMV 426

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F ++  E + P+ V + +LIHG C  + W++A+ L +EM+ +G+ PN + F
Sbjct: 427 GKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFF 486

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LCK G +  A  + +LM+++ V+ +   YNTL+DG+CL G+V+ A +L   M  
Sbjct: 487 NTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVL 546

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K N  +Y+ +INGYCKN  IE A SL+ +M SKG+ P +V Y+T+  GLF+  +   
Sbjct: 547 DGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAA 606

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M + G+  D   Y   + GLC+N    +A+ +F+ L ++ + L+ R +N +ID
Sbjct: 607 AKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMID 666

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L K GR   A +LF SL    L+ +VVTY +M+ +L   G
Sbjct: 667 ALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQG 707



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 196/392 (50%), Gaps = 42/392 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+V +YNT+INGL R G  +  A +LF++M +          P+ VTY +II  L K
Sbjct: 197 GYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQG------LSPDVVTYNSIISALSK 250

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +DKA  + ++M      PN +T+NSL+HG+C +   N+A  +F  M   GV+P+V +
Sbjct: 251 ARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFT 310

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +M  LCKNG+  EA ++ + M++ G +PN+  Y TL+ G+   G + +   L   M 
Sbjct: 311 YNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMV 370

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + + + ++ILI  Y K+ +++ A+ L+S+M  +G+ PD V Y  +   L  + +V+
Sbjct: 371 RNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVD 430

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLC------------------------------- 281
            A   F  +   G+  D   +R  I GLC                               
Sbjct: 431 DAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLL 490

Query: 282 ----KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
               K G +  A  +F  +  +  + D+  YN LIDG C  G++  A +L   +    + 
Sbjct: 491 NHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVK 550

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + VTYN MI+  C +G+++ A  LF  M +K
Sbjct: 551 PNEVTYNTMINGYCKNGRIEDAFSLFRQMASK 582



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 193/366 (52%), Gaps = 8/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   G EP+VFTYNTL+  LC+ G ++ A  +F+ M           KPN+ 
Sbjct: 291 DAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGH------KPNSA 344

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   EG + K   L   M    I P+   +N LI  +      ++A  LF +M
Sbjct: 345 TYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKM 404

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ V++ ++M+ LC  GK+D+A      +I  G+ P+A V+  L+ G C   + 
Sbjct: 405 RRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKW 464

Query: 182 NRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++AEEL V M   G C +N+F ++ L+N  CK   +  A +++  M+   ++ DV+ YNT
Sbjct: 465 DKAEELAVEMIGRGICPNNIF-FNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT 523

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G     +V+ A KL + M   GV  +   Y T I+G CKNG I +A  LFR +    
Sbjct: 524 LIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKG 583

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
               I  Y+ ++ GL ++ R   A EL+  + +  +  D+ TYNI++  LC +   D A 
Sbjct: 584 VNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDAL 643

Query: 361 DLFLDM 366
            +F ++
Sbjct: 644 RIFQNL 649



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA + +++   G  PN  T+N+L++G C +G    A+ +F+ M     E      P+  
Sbjct: 256 KAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVE------PDVF 309

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++  LCK G   +A+++F  M      PN  TY +L+HG+       +   L   M
Sbjct: 310 TYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMM 369

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+QP+   FN+++    K+GK+D+A  L   M + G+ P+   Y  +MD  C+ G+V
Sbjct: 370 VRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKV 429

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   F  + S G   +   +  LI+G C   + + A  L  EM+ +GI P+ + +NTL
Sbjct: 430 DDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTL 489

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   V RA  +FD M R  V  D   Y T IDG C +G + EA +L   + +   
Sbjct: 490 LNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGV 549

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +   YN +I+G CK+GR++ A+ LFR +    +   +VTY+ ++  L    +   A++
Sbjct: 550 KPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKE 609

Query: 362 LFLDM 366
           L+L M
Sbjct: 610 LYLWM 614



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 181/386 (46%), Gaps = 36/386 (9%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV--------------------- 55
           PN+ TY+ +I+   R GH  +A      +         +                     
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 56  ---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKM--KDEN---INPNVVTYNSL 101
                    C PN  +YT ++ GLC E    +A  L   M   D+      P+VV+YN++
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 102 IHGFCY-ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           I+G        + A  LF +M+DQG+ P+VV++N I++ L K   MD+A+ +L  M++ G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             PN   +N+L+ G+C +G+ N A  +F  M   G + +VF+Y+ L+   CKN     A 
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            ++  M+ +G KP+   Y TL  G      + +   L D M R+G+  D + +   I   
Sbjct: 329 KIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTY 388

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
            K+G + +A+ LF  +R      D   Y  ++D LC  G++  A   F  L    L  D 
Sbjct: 389 TKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDA 448

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           V +  +IH LCA  K DKA +L ++M
Sbjct: 449 VVFRNLIHGLCARDKWDKAEELAVEM 474


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  243 bits (620), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 202/356 (56%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N  +Y TLINGLC+TG T     L  ++       G   KP+ V Y TII  LCK 
Sbjct: 163 GFQLNQVSYRTLINGLCKTGETKAVARLLRKLE------GHSVKPDVVMYNTIIHSLCKN 216

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +  A +L+ +M  + I+PNVVTYN+L++GFC      EA  L  EM  + + P+V +F
Sbjct: 217 KLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTF 276

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ L K GKM  A  +L +M++  ++P+   YN+L+DG+    +V  A+ +F SM  
Sbjct: 277 NTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQ 336

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV +Y+ +I+G CK K ++ A+SL+ EM  K + PD+V Y +L  GL + H +ER
Sbjct: 337 SGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLER 396

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L  +M+  G+  D ++Y   +D LCK G +  A E F+ L +  Y L+++ YN +I+
Sbjct: 397 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMIN 456

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GLCK+     A +L   +     + D +T+  +I AL    + DKA  +  +M A+
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIAR 512



 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 216/391 (55%), Gaps = 29/391 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF +++     P++ TY +LI+GLC+  H   A+ L ++M     E G+  +P+  
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK----EQGI--QPDVY 414

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YT ++D LCK G ++ AKE F ++  +  + NV TYN +I+G C A+ + EA  L  +M
Sbjct: 415 SYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKM 474

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--------------------- 160
             +G  P+ ++F  I+  L +  + D+A ++L  MI  G                     
Sbjct: 475 EGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTK 534

Query: 161 --VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
             ++P+   Y TLMDG+ L   +  A+ +F SM  MG   NV  Y+I+I+G CK K ++ 
Sbjct: 535 ACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDE 594

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+SL+ EM  K + P++V Y +L   L + H +ERA  L  EM+ HG+  D ++Y   +D
Sbjct: 595 AMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLD 654

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GLCK+G +  A E+F+ L +  Y L+++ Y  +I+ LCK+G    A +L   +     + 
Sbjct: 655 GLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMP 714

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D VT++I+I AL    + DKA  +  +M A+
Sbjct: 715 DAVTFDIIIWALFEKDENDKAEKILXEMIAR 745



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 183/359 (50%), Gaps = 6/359 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF K    G  P++ T N L+N  C   H   A ++   +            PN +T  
Sbjct: 84  SLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYH------PNAITLN 137

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC  G + KA     ++  +    N V+Y +LI+G C   +      L  ++   
Sbjct: 138 TLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGH 197

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P+VV +N I++ LCKN  + +A  L   MI  G+ PN   YN L+ GFC+ G +  A
Sbjct: 198 SVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEA 257

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M+      +V +++ LI+   K  +++ A  + + M+   IKPDVV YN+L  G
Sbjct: 258 FSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDG 317

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            F +++V+ A  +F  M + GV  +   Y T IDGLCK   + EA+ LF  ++      D
Sbjct: 318 YFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPD 377

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           I  Y  LIDGLCK+  L+ A  L + +    +  DV +Y I++ ALC  G+++ A++ F
Sbjct: 378 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFF 436



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/424 (29%), Positives = 192/424 (45%), Gaps = 64/424 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++ V G  PNV TYN L+ G C  GH   A +L  EM   N        P+  
Sbjct: 221 DACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN------INPDVC 274

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+ID L KEG +  AK +   M    I P+VVTYNSLI G+ + N    AK +F  M
Sbjct: 275 TFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE--------------------------- 154
              GV PNV ++  +++ LCK   +DEA  L E                           
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHL 394

Query: 155 --------LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                    M + G++P+ + Y  L+D  C  GR+  A+E F  +   G   NV +Y+++
Sbjct: 395 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG- 265
           ING CK      A+ L S+M  KG  PD + + T+   LFE  + ++A K+  EM   G 
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 266 ----------------------VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
                                 +  D   Y T +DG      +  A  +F ++  +    
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +++ Y  +IDGLCK   +  A  LF  +    +  ++VTY  +I ALC +  +++A  L 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 364 LDME 367
            +M+
Sbjct: 635 KEMK 638



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 151/312 (48%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P T  +  I+  L           LF K +     P++ T N L++ FC+      A  +
Sbjct: 61  PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              ++ +G  PN ++ N ++  LC  G++ +A    + ++  G + N   Y TL++G C 
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           TG       L   +E    K +V  Y+ +I+  CKNK +  A  LYSEM+ KGI P+VV 
Sbjct: 181 TGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVT 240

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G   +  ++ AF L +EM+   +  D   + T ID L K G +  A  +   + 
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D+  YN LIDG     ++K A  +F S+ +  +  +V TY  MI  LC +  +D
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360

Query: 358 KARDLFLDMEAK 369
           +A  LF +M+ K
Sbjct: 361 EAMSLFEEMKYK 372



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 138/282 (48%), Gaps = 17/282 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVV----- 55
           EA  L  K+   GC P+  T+ T+I  L        A  +  EM A G  E   V     
Sbjct: 466 EAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEA 525

Query: 56  -----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                       KP+ VTY T++DG      +  AK +F  M    + PNV  Y  +I G
Sbjct: 526 KIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDG 585

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C     +EA  LF EM  + + PN+V++  +++ LCKN  ++ A  LL+ M + G++P+
Sbjct: 586 LCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPD 645

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            + Y  L+DG C +GR+  A+E+F  +   G   NV  Y+ +IN  CK    + AL L  
Sbjct: 646 VYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQX 705

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +M  KG  PD V ++ +   LFE  + ++A K+  EM   G+
Sbjct: 706 KMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMIARGL 747



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 112/243 (46%)

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M+     P    FN I++ L  N        L +     G  P+    N LM+ FC 
Sbjct: 51  FDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCH 110

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              +  A  +  ++   G   N  + + LI G C   EI+ AL  + +++++G + + V 
Sbjct: 111 LTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVS 170

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  GL +  + +   +L  +++ H V  D   Y T I  LCKN  + +A +L+  + 
Sbjct: 171 YRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMI 230

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +     ++  YN L+ G C  G LK A+ L   +    +  DV T+N +I AL  +GKM 
Sbjct: 231 VKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMK 290

Query: 358 KAR 360
            A+
Sbjct: 291 AAK 293


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/410 (35%), Positives = 219/410 (53%), Gaps = 50/410 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A A+F ++   G +P+  TYN LI+G   TG     + L EEM+  + E      P+  
Sbjct: 357 RAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLE------PDCF 410

Query: 62  TYTTIIDGLCKEG---------------------FVDKAKELFLKMKDENINPNVVTYNS 100
            Y  ++D LCK G                      +D+A  +F KM+ + ++PNVV Y +
Sbjct: 411 IYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGA 470

Query: 101 LI-----------------------HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           LI                       +G C    W +A+ L  EM+DQG++ +VV FN +M
Sbjct: 471 LIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLM 530

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
            +LC+ G++ EA RL+ELM+++GVRP+   YNTL+DG CLTGR + A +L   M S+G K
Sbjct: 531 CDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLK 590

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N F+Y+ L++GYCK + I+ A SL  EML  G  PDVV YNT+  GLF+  +   A +L
Sbjct: 591 PNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKEL 650

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           +  M       D + Y   ++GLCKN  + EA ++F++L     +L I  +N +I  L K
Sbjct: 651 YLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLK 710

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            G+ + A +LF ++    L+ DV TY ++   L  +G +++   LF  ME
Sbjct: 711 GGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAME 760



 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/405 (34%), Positives = 203/405 (50%), Gaps = 47/405 (11%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++  FGC PNV +YNTL+ G C       AL L   MA+  G   + C P+ V+Y T
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQG---LSCPPDVVSYNT 309

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G  +EG VDKA  LFL+M D  I P+VVTYN++I G C A   + AK +F +M+D+G
Sbjct: 310 VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKG 369

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+P+  ++N +++     GK  E  RLLE M    + P+ F+Y  L+D  C  GR   A 
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEAR 429

Query: 186 ELFVS---------------------MESMGCKHNVFSYSILINGYCKNKEIEGAL---- 220
            +F S                     M   G   NV +Y  LI+  CK   ++ A+    
Sbjct: 430 NIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFN 489

Query: 221 -------------------SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
                               L  EML +GI+ DVV++NTL   L    +V  A +L + M
Sbjct: 490 QMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELM 549

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            R GV  D  +Y T +DG C  G   EA +L   +  +  + +   YN L+ G CK+ R+
Sbjct: 550 LRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRI 609

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             A+ L R +       DVVTYN ++H L   G+  +A++L+L+M
Sbjct: 610 DDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNM 654



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 175/358 (48%), Gaps = 18/358 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+R  G  PNV  Y  LI+ LC+ G    A+  F +M N              
Sbjct: 448 EAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINE------------- 494

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
                + GLC     +KA+EL  +M D+ I  +VV +N+L+   C      EA+ L   M
Sbjct: 495 -----VYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELM 549

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+P+V+S+N +++  C  G+ DEA++LL++M+ IG++PN F YNTL+ G+C   R+
Sbjct: 550 LRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRI 609

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   +V +Y+ +++G  +      A  LY  M++   + D+  YN +
Sbjct: 610 DDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNII 669

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + + V+ AFK+F  +   G+      +   I  L K G   +A++LF T+     
Sbjct: 670 LNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGL 729

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D+  Y  + + L K G L+    LF ++       +    N ++      G + +A
Sbjct: 730 VPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRA 787



 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/416 (27%), Positives = 191/416 (45%), Gaps = 59/416 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCR------TGHTIVALNLFEEMANGNGEFGVV 55
           +A  LF  L       +V  +N L+  + R      T  + + ++LF+ M     E    
Sbjct: 134 DALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVR---ECSDK 190

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
             P+  TY+ +I   C+ G ++    +F  +       N + +N L+ G C A   +EA 
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 116 CLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ---IGVRPNAFVYNTL 171
            + +  M + G  PNVVS+N ++   C   + +EA  LL +M     +   P+   YNT+
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++GF   G+V++A  LF+ M   G   +V +Y+ +I+G CK + ++ A +++ +ML KG+
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG------- 284
           KP    YN L  G     + +   +L +EM  H +  D + Y   +D LCKNG       
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARN 430

Query: 285 --------------YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA------ 324
                          I EAV +F  +R      ++  Y  LID LCK GR+  A      
Sbjct: 431 IFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQ 490

Query: 325 -------------WE-----LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                        WE     +F  L +G+ + DVV +N ++  LC +G++ +A+ L
Sbjct: 491 MINEVYGLCTVEKWEKAEELVFEMLDQGIRL-DVVVFNTLMCDLCREGRVMEAQRL 545



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 157/319 (49%), Gaps = 10/319 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +V  +NTL+  LCR G  + A  L E M        V  +P+ ++Y T++DG C  
Sbjct: 518 GIRLDVVVFNTLMCDLCREGRVMEAQRLIELM------LRVGVRPDVISYNTLVDGHCLT 571

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  D+A +L   M    + PN  TYN+L+HG+C A   ++A  L  EM+  G  P+VV++
Sbjct: 572 GRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTY 631

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++ L + G+  EA  L   MI    + + + YN +++G C    V+ A ++F S+ S
Sbjct: 632 NTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCS 691

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + ++ +++I+I    K  + E A+ L++ + + G+ PDV  Y  +   L +   +E 
Sbjct: 692 KGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEE 751

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              LF  M+ +G A ++      +      G I  A      L    + L+    + LI 
Sbjct: 752 LGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI- 810

Query: 314 GLCKSGRLKIAWELFRSLP 332
            L   G  +   +L +SLP
Sbjct: 811 SLYSRGEYQ---QLAKSLP 826



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 124/242 (51%), Gaps = 4/242 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P+  ++++++   C+ G+++    +  L+++ G R N  V+N L+ G C   R++ A 
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIK--PDVVIYNTL 241
            + +  M   GC  NV SY+ L+ G+C     E AL L   M   +G+   PDVV YNT+
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTV 310

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F   QV++A+ LF +M   G+  D   Y T IDGLCK   +  A  +F+ +     
Sbjct: 311 INGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGV 370

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     YNCLI G   +G+ K    L   +    L  D   Y +++  LC +G+  +AR+
Sbjct: 371 KPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARN 430

Query: 362 LF 363
           +F
Sbjct: 431 IF 432



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 129/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  L   +   G  P+V +YNTL++G C TG T  A  L + M +      +  KPN 
Sbjct: 540 MEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS------IGLKPNE 593

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++ G CK   +D A  L  +M      P+VVTYN+++HG      ++EAK L++ 
Sbjct: 594 FTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLN 653

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++   Q ++ ++N+I+N LCKN  +DEA ++ + +   G++ +   +N ++      G+
Sbjct: 654 MINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGK 713

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   +V +Y ++     K   +E    L+S M   G  P+  + N 
Sbjct: 714 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNA 773

Query: 241 LFIGLFEIHQVERA 254
           L         + RA
Sbjct: 774 LVRRFLHRGDISRA 787


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/368 (37%), Positives = 199/368 (54%), Gaps = 9/368 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           +E A  F +     C PNV TY+ LI+GLC+      A+ L E M A G       C P+
Sbjct: 95  IETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG-------CSPD 147

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TYT ++DGLCKE  V  A E+  +M D    PN+VTYNSL+HG C A   ++A  L  
Sbjct: 148 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M  +G  PNVV++  +++ LCK G++ +A  +L  MI  G  P+  +YN L++G C   
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V+ +  L     S G K +V +YS +I G C++  ++ A  L   + S+G  PDV++Y+
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL +  +V+ AF L++ M   G  AD   Y T IDGLCK G + EA  L   +  +
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                   YN LI GLC    L  A EL   + R       VTYNI+IH +C   ++D A
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 447

Query: 360 R-DLFLDM 366
             D F +M
Sbjct: 448 ALDYFQEM 455



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/391 (34%), Positives = 203/391 (51%), Gaps = 41/391 (10%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID- 68
           +R  GCEPNV TYN+LI+GLC+      A  LFE M +      V C P+ VTY T++D 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS------VECSPSMVTYNTLLDG 54

Query: 69  ---------------------------------GLCKEGFVDKAKELFLKMKDENINPNV 95
                                            GLC+ G ++ A E F KM D+  +PNV
Sbjct: 55  LFRTGKLERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNV 113

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +TY+ LI G C AN  ++A  L   M  +G  P+V+++ ++++ LCK  K+  A  +L  
Sbjct: 114 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 173

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G  PN   YN+L+ G C   RV+ A  L   M   GC  NV +Y  LI+G CK   
Sbjct: 174 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 233

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A ++ ++M+ KG  PD++IYN L  GL +  QV+ +  L       G+  D   Y +
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 293

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I GLC++  + EA  L   ++      D+  Y+ LIDGLCK+G++  A++L+  +    
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDG 353

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             ADVVTY+ +I  LC  G++D+A  L   M
Sbjct: 354 CDADVVTYSTLIDGLCKAGRVDEAHLLLARM 384



 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/393 (34%), Positives = 206/393 (52%), Gaps = 27/393 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE----FGVV-- 55
            A  LF  ++   C P++ TYNTL++GL RTG    A+ LF+EM +        F ++  
Sbjct: 28  RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDVISFNILVT 87

Query: 56  ---------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPN 94
                                C PN +TY+ +IDGLCK   V +A EL   MK    +P+
Sbjct: 88  GLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 147

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           V+TY  L+ G C  +    A  +  EM+D G  PN+V++N +++ LC+  ++ +A  L+ 
Sbjct: 148 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  PN   Y TL+DG C  GRV  A  +   M   G   ++  Y++LING CK  
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +++ +++L    +S GIKPDVV Y+++  GL   ++++ A +L   ++  G   D   Y 
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T IDGLCK G + EA +L+  +     + D+  Y+ LIDGLCK+GR+  A  L   + R 
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                 +TYN +I  LC    +D+A +L  +ME
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 420



 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 118/316 (37%), Positives = 181/316 (57%), Gaps = 6/316 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+PN VTY ++IDGLCK    D+A+ELF  MK    +P++VTYN+L+ G         A 
Sbjct: 6   CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 65

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR--PNAFVYNTLMD 173
            LF EM+D+    +V+SFN+++  LC+ GK++ A   LE   ++  R  PN   Y+ L+D
Sbjct: 66  ALFQEMLDRRSH-DVISFNILVTGLCRAGKIETA---LEFFRKMDDRCSPNVITYSVLID 121

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C   RV++A EL  SM++ GC  +V +Y+IL++G CK  ++  A  +  EML  G  P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           ++V YN+L  GL    +V  A  L  +M   G   +   Y T IDGLCK G + +A  + 
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +       D+  YN LI+GLCK+ ++  +  L R    G +  DVVTY+ +I+ LC  
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301

Query: 354 GKMDKARDLFLDMEAK 369
            ++D+A  L L ++++
Sbjct: 302 NRLDEACRLLLYVKSR 317



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/309 (35%), Positives = 173/309 (55%), Gaps = 7/309 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+ TYN+L++GLCR      AL L  +M          C PN VTY T+IDGLCK 
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG------CTPNVVTYGTLIDGLCKV 231

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A  +   M D+   P+++ YN LI+G C A+  +E+  L    +  G++P+VV++
Sbjct: 232 GRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 291

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++  LC++ ++DEA RLL  +   G  P+  +Y+TL+DG C  G+V+ A +L+  M  
Sbjct: 292 SSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTG 351

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V +YS LI+G CK   ++ A  L + M+  G  P  + YN+L  GL +++ ++ 
Sbjct: 352 DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDE 411

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI-VEAVELFRTLRILKYELDIRAYNCLI 312
           A +L +EM+R   A     Y   I G+C+   +   A++ F+ +       D   Y+ L+
Sbjct: 412 AIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILL 471

Query: 313 DGLCKSGRL 321
           +GL KS  L
Sbjct: 472 EGLKKSKDL 480



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 116/210 (55%), Gaps = 2/210 (0%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G  PN   YN+L+DG C     +RA+ELF  M+S+ C  ++ +Y+ L++G  +  ++E A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           ++L+ EML +    DV+ +N L  GL    ++E A + F +M     + +   Y   IDG
Sbjct: 65  MALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDG 122

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           LCK   + +AVEL  +++      D+  Y  L+DGLCK  ++  AWE+ R +     + +
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +VTYN ++H LC   ++  A  L  DM  +
Sbjct: 183 LVTYNSLLHGLCRARRVSDALALMRDMTCR 212



 Score =  130 bits (327), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 7/217 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+ AL  +    G +P+V TY+++I GLCR+     A  L   + +        C P+ +
Sbjct: 271 ESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRG------CPPDVI 324

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+T+IDGLCK G VD+A +L+  M  +  + +VVTY++LI G C A   +EA  L   M
Sbjct: 325 LYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 384

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+ +++N ++  LC    +DEA  L+E M +    P+A  YN L+ G C   RV
Sbjct: 385 VRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERV 444

Query: 182 NRAE-ELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + A  + F  M   G   +  +YSIL+ G  K+K++ 
Sbjct: 445 DSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLH 481



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 99/198 (50%), Gaps = 43/198 (21%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + ++  GC P+V  Y+TLI+GLC+ G    A +L+E M  G+G     C  + V
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM-TGDG-----CDADVV 359

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL---- 117
           TY+T+IDGLCK G VD+A  L  +M      P+ +TYNSLI G C  N  +EA  L    
Sbjct: 360 TYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEM 419

Query: 118 --------------------------------FIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                                           F EM+D GV P+ +++++++  L K+  
Sbjct: 420 ERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKD 479

Query: 146 MDEASRL-LELMIQIGVR 162
           + E   L L+ M+Q+G R
Sbjct: 480 LHELRHLVLDQMVQLGYR 497


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 203/366 (55%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     K+   G  P+ FTY +LI G CR      A  +F  M          C+ N 
Sbjct: 211 VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG------CQRNE 264

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+YT +I GLC+ G +++A +LF  M ++N  P V TY  LI+    +    EA  LF E
Sbjct: 265 VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +PNV ++ V+++ LCK  KMDEA ++L  M + G+ P+   YN L+DG+C  G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A E+   MES  C  N  +Y+ LI G CK +++  A++L ++ML + + P ++ YN+
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +++ +E A++L   M  +G+  D W Y  FID LCK G + EA  LF +++   
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +   Y  LIDG CK G++ +A+ L   +     + +  TYN++I  LC + KM +A 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 361 DLFLDM 366
            L   M
Sbjct: 565 SLVAKM 570



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 190/363 (52%), Gaps = 6/363 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF +++  GCEPNV TY  LI+GLC+      A  +  EM+    E G++  P+ 
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS----EKGLI--PSV 369

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +IDG CKEG +D A E+   M+  +  PN  TYN LI G C     ++A  L  +
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+++++N +++  CK   ++ A RLL LM + G+ P+ + Y+  +D  C  GR
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  LF S+++ G K N   Y+ LI+GYCK  +I+ A SL   ML+    P+   YN 
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +++ A  L  +M   GV      Y   I  + K+G    A+++F  +  L 
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y+ D+  Y   +      G L+   ++   +    ++ D+VTY ++I      G   +A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 361 DLF 363
           D  
Sbjct: 670 DFL 672



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 194/399 (48%), Gaps = 40/399 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           + ++ R+ G    +    ++I   C     +  L +F +M N +GEF    KP    Y T
Sbjct: 110 ILIRARLLGVAEKIRI--SMIKSCCSIEDVLFVLEVFRKM-NADGEFKF--KPTLRCYNT 164

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           I+  L K   +D+ K ++L++ +  I+PN+ T+N++++G+C   +  EA+    +++  G
Sbjct: 165 ILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAG 224

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+  ++  ++   C+N  +D A  +  +M Q G + N   Y  L+ G C  GR+N A 
Sbjct: 225 LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEAL 284

Query: 186 ELFV-----------------------------------SMESMGCKHNVFSYSILINGY 210
           +LF                                     M+  GC+ NV +Y++LI+G 
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ A  + SEM  KG+ P VV YN L  G  +   ++ AF++ D M+ +    +T
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I GLCK   + +A+ L   +   K    +  YN LI G CK   L+ A+ L   
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    L+ D  TY++ I  LC +G++++A  LF  ++AK
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 170/380 (44%), Gaps = 37/380 (9%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+ +TY+  I+ LC+ G    A  LF+ + A G        K N V YT +IDG CK
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG-------VKANEVIYTALIDGYCK 521

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D A  L  +M ++   PN  TYN LI G C      EA  L  +M+  GV+P VV+
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           + +++ E+ K+G  D A ++   M+ +G +P+   Y   +  +   G +   +++   M 
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF---------- 242
             G   ++ +Y++LI+GY +      A      M+  G KP + I + L           
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701

Query: 243 -----IGLFEIHQV--------------ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
                IG+  +  V              E A KLF++M  HG   D   Y   I G C+ 
Sbjct: 702 ETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQ 761

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
             + EA  L   ++          YN L+D  CK G    A  L  ++    L+  + +Y
Sbjct: 762 ERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESY 821

Query: 344 NIMIHALCADGKMDKARDLF 363
            +++  L  +G  +KA+ +F
Sbjct: 822 KLLVCGLYIEGSNEKAKAVF 841



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 153/380 (40%), Gaps = 70/380 (18%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  ++  G + N   Y  LI+G C+ G   VA +L E M N        C PN+ 
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND------ACLPNSY 545

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLCKE  + +A  L  KM    + P VVTY  LI        ++ A  +F  M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QP+V ++   ++     G ++E   ++  M + G+ P+   Y  L+DG+   G  
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYC-----------------------------K 212
           +RA +    M   GCK +++  SILI                                 K
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWK 725

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E E AL L+ +M+  G   DV IY  L  G  +  ++E A  L   M+  G++     
Sbjct: 726 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 785

Query: 273 YRTFIDGLCKNGYIVEAVEL-----------------------------------FRTLR 297
           Y + +D  CK G   EAV L                                   F  L 
Sbjct: 786 YNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLL 845

Query: 298 ILKYELDIRAYNCLIDGLCK 317
              Y  D  A+  LIDGL K
Sbjct: 846 SCGYNYDEVAWKVLIDGLLK 865



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 138/321 (42%), Gaps = 35/321 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA++L  K+   G +P V TY  LI  + + G    AL +F  M +     G   +P+  
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVS----LGY--QPDVC 615

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT  +     +G +++  ++  KM +E I P++VTY  LI G+      + A      M
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDE-----------------------------ASRL 152
           +D G +P++   ++++  L    +M E                             A +L
Sbjct: 676 VDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKL 735

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E M++ G   +  +Y  L+ GFC   R+  A+ L   M+  G   +   Y+ L++  CK
Sbjct: 736 FEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCK 795

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                 A+ L   M+  G+ P +  Y  L  GL+     E+A  +F  +   G   D  A
Sbjct: 796 LGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVA 855

Query: 273 YRTFIDGLCKNGYIVEAVELF 293
           ++  IDGL K   + E  EL 
Sbjct: 856 WKVLIDGLLKRDLVDECSELI 876



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 27/197 (13%)

Query: 195 GCKHNVFSYSILIN--------------------GYCKNKEIEGALSLYSEMLSKG---I 231
           G KHNV SYS ++N                      C  +++   L ++ +M + G    
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKF 155

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KP +  YNT+ + L +   ++    ++ E+  + ++ + + +   ++G CK G +VEA E
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-E 214

Query: 292 LFRTLRILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           L+ + +I++  L  D   Y  LI G C++  +  A+E+F  +P+     + V+Y  +IH 
Sbjct: 215 LYAS-KIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273

Query: 350 LCADGKMDKARDLFLDM 366
           LC  G++++A  LF DM
Sbjct: 274 LCEAGRINEALKLFADM 290


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/354 (37%), Positives = 195/354 (55%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+++TYN+LI+GLC+ G    A+ +  +M   +      C PNTVTY TII  LCKE
Sbjct: 331 GFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD------CSPNTVTYNTIISTLCKE 384

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++A +L L +  + I P+V TYNSLI G C + +   A  L+ EM  +G  P+  ++
Sbjct: 385 NQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTY 444

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC  GK+ EA  LL+ M   G   N   YNTL+DGFC   R+  AEE+F  ME 
Sbjct: 445 NMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMEL 504

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +Y+ LI+G CK++ +E A  L  +M+ +G++PD   YN+L     +   +++
Sbjct: 505 QGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKK 564

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M   G   D   Y T I GLCK G +  A +L RT+++    L   AYN +I 
Sbjct: 565 AADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQ 624

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDM 366
            L +  R K A  LFR +       D VTY I+   LC   G + +A D  ++M
Sbjct: 625 ALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEM 678



 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 197/356 (55%), Gaps = 5/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC     T N L+NG C+ G    AL   EEM+   G F     P+  T+  +++GL K 
Sbjct: 260 GCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFF-----PDKYTFNMLVNGLSKT 314

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A E+   M  E  +P++ TYNSLI G C   + +EA  +  +M+++   PN V++
Sbjct: 315 GHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTY 374

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++ LCK  +++EA++L  ++   G+ P+   YN+L+ G CL+     A EL+  M++
Sbjct: 375 NTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKT 434

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  + F+Y++LI+  C   +++ AL+L  EM   G   +V+ YNTL  G  +  ++  
Sbjct: 435 KGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAE 494

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++FD+M+  GV+ ++  Y T IDGLCK+  + EA +L   + +     D   YN L+ 
Sbjct: 495 AEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLT 554

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             CK+G +K A ++ +++       D+VTY  +I  LC  G+++ A  L   ++ K
Sbjct: 555 YFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMK 610



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 170/315 (53%), Gaps = 7/315 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + L   G  P+V TYN+LI GLC + +  VA+ L++EM          C P+  
Sbjct: 389 EATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKG------CHPDEF 442

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC  G + +A  L  +M+      NV+TYN+LI GFC      EA+ +F +M
Sbjct: 443 TYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM 502

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QGV  N V++N +++ LCK+ +++EAS+L++ MI  G+RP+ F YN+L+  FC  G +
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDI 562

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M S GC+ ++ +Y  LI G CK   +E A  L   +  KGI      YN +
Sbjct: 563 KKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPV 622

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF   + + A +LF EM     A D   Y+    GLC+  G I EAV+    +    
Sbjct: 623 IQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERG 682

Query: 301 YELDIRAYNCLIDGL 315
           Y  +  ++  L +GL
Sbjct: 683 YVPEFSSFYMLAEGL 697



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 183/356 (51%), Gaps = 7/356 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FG   N   YN L+N L         L L E   +     G+  +P+  T+  +I  LC+
Sbjct: 154 FGVVANTHFYNFLLNVLVDGNK----LKLVEIAHSNMVSRGI--RPDVSTFNILIKALCR 207

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +  A  L  +M+D  + P+  T+ +++ GF    + + A  +  +M++ G     V+
Sbjct: 208 AHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVT 267

Query: 133 FNVIMNELCKNGKMDEASRLLELM-IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
            NV++N  CK G+++EA R +E M ++ G  P+ + +N L++G   TG V  A E+   M
Sbjct: 268 VNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMM 327

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   ++++Y+ LI+G CK  E++ A+ + ++M+ +   P+ V YNT+   L + +QV
Sbjct: 328 LREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQV 387

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A KL   +   G+  D   Y + I GLC +     A+EL++ ++      D   YN L
Sbjct: 388 EEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNML 447

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ID LC  G+L+ A  L + +       +V+TYN +I   C + ++ +A ++F  ME
Sbjct: 448 IDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQME 503



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 137/282 (48%), Gaps = 9/282 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ V GC  NV TYNTLI+G C+      A  +F++M     E   V + N+V
Sbjct: 459 EALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQM-----ELQGVSR-NSV 512

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDGLCK   V++A +L  +M  E + P+  TYNSL+  FC A D  +A  +   M
Sbjct: 513 TYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTM 572

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++V++  ++  LCK G+++ A++LL  +   G+      YN ++       R 
Sbjct: 573 ASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRS 632

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             A  LF  M       +  +Y I+  G C+    I  A+    EML +G  P+   +  
Sbjct: 633 KEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYM 692

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           L  GLF +  V    KL D +      +D     T I G  K
Sbjct: 693 LAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV--TMIRGFLK 732



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 174/390 (44%), Gaps = 43/390 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN FT   L++ L R   +   ++LF   A+    F    KP++  +  ++  L K G  
Sbjct: 52  PN-FTPTQLLHSLRREEDSSAVIHLFY-WASKQPNF----KPSSSIFKEVLHKLGKAGEF 105

Query: 77  DKAKELFLKMK------------------------------------DENINPNVVTYNS 100
           D  K++  +MK                                    +  +  N   YN 
Sbjct: 106 DAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNF 165

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L++     N     +     M+ +G++P+V +FN+++  LC+  ++  A  L+E M   G
Sbjct: 166 LLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFG 225

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + P+   + T+M GF   G ++ A  +   M   GC     + ++L+NG+CK   IE AL
Sbjct: 226 LLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEAL 285

Query: 221 SLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
               EM L +G  PD   +N L  GL +   V+ A ++ D M R G   D + Y + I G
Sbjct: 286 RFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISG 345

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           LCK G + EAV++   +       +   YN +I  LCK  +++ A +L   L    ++ D
Sbjct: 346 LCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPD 405

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           V TYN +I  LC       A +L+ +M+ K
Sbjct: 406 VCTYNSLIQGLCLSRNHTVAMELYKEMKTK 435


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/366 (35%), Positives = 203/366 (55%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     K+   G  P+ FTY +LI G CR      A  +F  M          C+ N 
Sbjct: 211 VEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKG------CQRNE 264

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+YT +I GLC+ G +++A +LF  M ++N  P V TY  LI+    +    EA  LF E
Sbjct: 265 VSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNE 324

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +PNV ++ V+++ LCK  KMDEA ++L  M + G+ P+   YN L+DG+C  G 
Sbjct: 325 MKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGM 384

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A E+   MES  C  N  +Y+ LI G CK +++  A++L ++ML + + P ++ YN+
Sbjct: 385 IDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNS 444

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +++ +E A++L   M  +G+  D W Y  FID LCK G + EA  LF +++   
Sbjct: 445 LIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG 504

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +   Y  LIDG CK G++ +A+ L   +     + +  TYN++I  LC + KM +A 
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 361 DLFLDM 366
            L   M
Sbjct: 565 SLVAKM 570



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 190/363 (52%), Gaps = 6/363 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF +++  GCEPNV TY  LI+GLC+      A  +  EM+    E G++  P+ 
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMS----EKGLI--PSV 369

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +IDG CKEG +D A E+   M+  +  PN  TYN LI G C     ++A  L  +
Sbjct: 370 VTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNK 429

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+++++N +++  CK   ++ A RLL LM + G+ P+ + Y+  +D  C  GR
Sbjct: 430 MLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGR 489

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  LF S+++ G K N   Y+ LI+GYCK  +I+ A SL   ML+    P+   YN 
Sbjct: 490 VEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +++ A  L  +M   GV      Y   I  + K+G    A+++F  +  L 
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y+ D+  Y   +      G L+   ++   +    ++ D+VTY ++I      G   +A 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 361 DLF 363
           D  
Sbjct: 670 DFL 672



 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 194/399 (48%), Gaps = 40/399 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           + ++ R+ G    +    ++I   C     +  L +F +M N +GEF    KP    Y T
Sbjct: 110 ILIRARLLGVAEKIRI--SMIKSCCSIEDVLFVLEVFRKM-NADGEFKF--KPTLRCYNT 164

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           I+  L K   +D+ K ++L++ +  I+PN+ T+N++++G+C   +  EA+    +++  G
Sbjct: 165 ILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAG 224

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+  ++  ++   C+N  +D A  +  +M Q G + N   Y  L+ G C  GR+N A 
Sbjct: 225 LHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEAL 284

Query: 186 ELFVSM-----------------------------------ESMGCKHNVFSYSILINGY 210
           +LF  M                                   +  GC+ NV +Y++LI+G 
Sbjct: 285 KLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGL 344

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ A  + SEM  KG+ P VV YN L  G  +   ++ AF++ D M+ +    +T
Sbjct: 345 CKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNT 404

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I GLCK   + +A+ L   +   K    +  YN LI G CK   L+ A+ L   
Sbjct: 405 RTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSL 464

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    L+ D  TY++ I  LC +G++++A  LF  ++AK
Sbjct: 465 MNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAK 503



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 170/369 (46%), Gaps = 26/369 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+ +TY+  I+ LC+ G    A  LF+ + A G        K N V YT +IDG CK
Sbjct: 469 GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKG-------VKANEVIYTALIDGYCK 521

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D A  L  +M ++   PN  TYN LI G C      EA  L  +M+  GV+P VV+
Sbjct: 522 VGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVT 581

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           + +++ E+ K+G  D A ++   M+ +G +P+   Y   +  +   G +   +++   M 
Sbjct: 582 YTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMN 641

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF---------- 242
             G   ++ +Y++LI+GY +      A      M+  G KP + I + L           
Sbjct: 642 EEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMK 701

Query: 243 -----IGLFEIH---QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
                IG+  +    + E A KLF++M  HG   D   Y   I G C+   + EA  L  
Sbjct: 702 ETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 761

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++          YN L+D  CK G    A  L  ++    L+  + +Y +++  L  +G
Sbjct: 762 HMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 821

Query: 355 KMDKARDLF 363
             +KA+ +F
Sbjct: 822 SNEKAKAVF 830



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 166/402 (41%), Gaps = 59/402 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  ++  G + N   Y  LI+G C+ G   VA +L E M N        C PN+ 
Sbjct: 492 EAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND------ACLPNSY 545

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLCKE  + +A  L  KM    + P VVTY  LI        ++ A  +F  M
Sbjct: 546 TYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHM 605

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QP+V ++   ++     G ++E   ++  M + G+ P+   Y  L+DG+   G  
Sbjct: 606 VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLT 665

Query: 182 NRAEELFVSMESMGCKHNVFSYSILI------------------NGYCKNKEIEGALSLY 223
           +RA +    M   GCK +++  SILI                  +      E E AL L+
Sbjct: 666 HRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLF 725

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M+  G   DV IY  L  G  +  ++E A  L   M+  G++     Y + +D  CK 
Sbjct: 726 EKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKL 785

Query: 284 GYIVEAVEL-----------------------------------FRTLRILKYELDIRAY 308
           G   EAV L                                   F  L    Y  D  A+
Sbjct: 786 GVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAW 845

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
             LIDGL K   +    EL   +       + +TY+++I  L
Sbjct: 846 KVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 99/197 (50%), Gaps = 27/197 (13%)

Query: 195 GCKHNVFSYSILIN--------------------GYCKNKEIEGALSLYSEMLSKG---I 231
           G KHNV SYS ++N                      C  +++   L ++ +M + G    
Sbjct: 96  GFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLFVLEVFRKMNADGEFKF 155

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KP +  YNT+ + L +   ++    ++ E+  + ++ + + +   ++G CK G +VEA E
Sbjct: 156 KPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEA-E 214

Query: 292 LFRTLRILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           L+ + +I++  L  D   Y  LI G C++  +  A+E+F  +P+     + V+Y  +IH 
Sbjct: 215 LYAS-KIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHG 273

Query: 350 LCADGKMDKARDLFLDM 366
           LC  G++++A  LF DM
Sbjct: 274 LCEAGRINEALKLFADM 290


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/357 (38%), Positives = 198/357 (55%), Gaps = 9/357 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP + ++N +INGLC+ G    A ++ E+M       GV    N +TY T+IDG CK G 
Sbjct: 160 EPTLISFNIVINGLCKVGKLNKAGDIIEDMK----VRGV--SANVITYNTLIDGYCKMGK 213

Query: 76  VDK---AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           + K   A  +  +M+ + I PN VT+N LI GFC   + + A  +F EM  QGV+PNVV+
Sbjct: 214 IGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVT 273

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++N LC NGK++EA+ L + M+   ++PN   +N L++GFC    V +A ELF  M 
Sbjct: 274 YNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMP 333

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   NV +Y+ILI+ YCK++ +E A +LY  ML KG+ PDV  YN L  GL     +E
Sbjct: 334 KQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLE 393

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L  EM    + AD   Y   ID LC  G + +A+ L   +     +     YN +I
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMI 453

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DG CK G L+ A  L   + +   +A+V TYN++I   C   K++ A  L  +M  K
Sbjct: 454 DGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEK 510



 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 192/357 (53%), Gaps = 11/357 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHT---IVALNLFEEM-ANGNGEFGVVCK 57
           +A  +   ++V G   NV TYNTLI+G C+ G       A  + +EM A+G      +C 
Sbjct: 181 KAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG------IC- 233

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN VT+  +IDG CK+  V  A ++F +M  + + PNVVTYNSLI+G C     NEA  L
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M++  ++PN+++ N ++N  CKN  + +A  L + M + G+ PN   YN L+D +C 
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              +  A  L+  M   G   +V +Y+ LI G C+  ++E A +L SEM +K +K D++ 
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L   L    ++++A +L DEM R G+      Y T IDG CK G +  A+ L   + 
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQME 473

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +    ++  YN LI G CK  +L+ A  L   +    LI + +TY I+   +   G
Sbjct: 474 KVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 189/364 (51%), Gaps = 9/364 (2%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F +   +G + +V + N L++GL + G       +++EM     E      P  +++  +
Sbjct: 116 FKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIE------PTLISFNIV 169

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE---AKCLFIEMMD 123
           I+GLCK G ++KA ++   MK   ++ NV+TYN+LI G+C      +   A  +  EM  
Sbjct: 170 INGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRA 229

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G+ PN V+FN++++  CK+  +  A ++   M + GV+PN   YN+L++G C  G+VN 
Sbjct: 230 DGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNE 289

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L   M +   K N+ +++ L+NG+CKNK ++ A  L+ +M  +GI P+V  YN L  
Sbjct: 290 ATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILID 349

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
              +   +E AF L+  M   GV  D   Y   I GLC+ G +  A  L   +     + 
Sbjct: 350 AYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKA 409

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D+  YN LID LC  G +K A  L   + R  L    +TYN MI   C +G +  A +L 
Sbjct: 410 DLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLR 469

Query: 364 LDME 367
             ME
Sbjct: 470 SQME 473



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 171/324 (52%), Gaps = 38/324 (11%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           E F +  D  +  +V + N L+ G     +  + + ++ EM+ + ++P ++SFN+++N L
Sbjct: 114 EAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGL 173

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAEELFVSMESMGCK 197
           CK GK+++A  ++E M   GV  N   YNTL+DG+C  G++    +A+ +   M + G  
Sbjct: 174 CKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGIC 233

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE---------- 247
            N  +++ILI+G+CK+K +  A+ +++EM  +G+KP+VV YN+L  GL            
Sbjct: 234 PNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATAL 293

Query: 248 --------------IHQ-----------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
                          H            V++A +LFD+M + G+  +   Y   ID  CK
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +  + +A  L+R +       D+  YNCLI GLC+ G L+ A  L   +    L AD++T
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLIT 413

Query: 343 YNIMIHALCADGKMDKARDLFLDM 366
           YNI+I +LC  G+M KA  L  +M
Sbjct: 414 YNILIDSLCNKGEMKKALRLLDEM 437



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 149/286 (52%), Gaps = 6/286 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   G +PNV TYN+LINGLC  G    A  L ++M N         KPN +T
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNS------CLKPNIIT 308

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +++G CK   V +A ELF  M  + I PNV TYN LI  +C   +  +A  L+  M+
Sbjct: 309 HNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIML 368

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV P+V ++N ++  LC+ G ++ A  L+  M    ++ +   YN L+D  C  G + 
Sbjct: 369 GKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMK 428

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  L   M   G K +  +Y+ +I+GYCK   +  AL+L S+M   G   +V  YN L 
Sbjct: 429 KALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLI 488

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G  +  ++E A  L +EM   G+  +   Y    + + + G++ +
Sbjct: 489 KGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 106/202 (52%), Gaps = 3/202 (1%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N+ + + L+  +    R     E F      G K +V S + L++G  K  EI     +Y
Sbjct: 92  NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EM+ + I+P ++ +N +  GL ++ ++ +A  + ++M+  GV+A+   Y T IDG CK 
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 284 GYI---VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           G I    +A  + + +R      +   +N LIDG CK   +  A ++F  + R  +  +V
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271

Query: 341 VTYNIMIHALCADGKMDKARDL 362
           VTYN +I+ LC +GK+++A  L
Sbjct: 272 VTYNSLINGLCNNGKVNEATAL 293


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 137/365 (37%), Positives = 191/365 (52%), Gaps = 6/365 (1%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  L  ++   G   NV  +N +I GLC       AL LF+EM          C P+  T
Sbjct: 896  AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGS-----CPPDVFT 950

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            Y+TI+D L K G VD A  L   M  +  +PNVVTY+SL+HG C A   +EA  L   M 
Sbjct: 951  YSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 1010

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              G  PN+V++N I++  CK G++DEA  LLE M+  G +PN   Y  L+D FC  G+  
Sbjct: 1011 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 1070

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A  L   M   G   N+F+Y+ L++ +CK  E+E A  L S M+ KG  P+VV YNT+ 
Sbjct: 1071 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 1130

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             GL +  +V     L ++M  +    D   + T ID +CK   +  A ELF  ++     
Sbjct: 1131 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 1190

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARD 361
             ++  YN L+ GLCKS R   A  L R + R      D++TYN +I  LC   ++D+A  
Sbjct: 1191 PNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYK 1250

Query: 362  LFLDM 366
            LFL M
Sbjct: 1251 LFLQM 1255



 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/366 (37%), Positives = 201/366 (54%), Gaps = 7/366 (1%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA AL  ++   GC PN+ TYNT+I+G C+ G    A +L EEM +G       C+PN V
Sbjct: 1001 EATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGG------CQPNVV 1054

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TYT ++D  CK G  + A  L   M ++   PN+ TYNSL+  FC  ++   A  L   M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + +G  PNVVS+N ++  LCK  K+ E   LLE M+     P+   +NT++D  C T RV
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
            + A ELF  ++  GC  N+ +Y+ L++G CK++  + A  L  EM  K G  PD++ YNT
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
            +  GL +  +V+RA+KLF +M   G+A D   Y   I  LCK  ++ EA  +   +    
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 301  YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            ++     Y  LIDG CK+G L  A E+ + L       DVVT++I I  L   G++ +A 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354

Query: 361  DLFLDM 366
            +L   M
Sbjct: 1355 ELLETM 1360



 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/361 (34%), Positives = 196/361 (54%), Gaps = 6/361 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   GC P+V +Y T+INGLC+      A  + ++M          C+PN +T
Sbjct: 284 ALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRG------CQPNVIT 337

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++DG C+ G +D A EL  KM +    PN +TYN+++H FC  ND   A  +   M+
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+ ++++ I++  CK GK+ EA  LLE MI+ G RP+    +TL+D  C    ++
Sbjct: 398 QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAID 457

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+EL      M C  +V +YSILI+  CK K +  A S    M+     PDVV YN++ 
Sbjct: 458 SAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVV 517

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  ++  AF LFD M+  GV  D   Y   I   CK+  +  A ++   ++  K  
Sbjct: 518 DGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV 577

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y+ LI+GLCK+G +  A+++F+ +       ++VTYN +I  LC   K+++A ++
Sbjct: 578 PDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEM 637

Query: 363 F 363
            
Sbjct: 638 L 638



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 124/353 (35%), Positives = 191/353 (54%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNVF+YNT+++G C+      AL L E+M          C P+ V+YTT+I+GLCK 
Sbjct: 260 GFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRG------CPPDVVSYTTVINGLCKL 313

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A  +  KM      PNV+TY +L+ GFC   D + A  L  +M ++G +PN +++
Sbjct: 314 DQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 373

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N IM+  C+   M+ A ++L++MIQ G  P+A  Y+T++ GFC  G++  A +L   M  
Sbjct: 374 NNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIR 433

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ +V   S LI+  CK   I+ A  L    +     PDVV Y+ L   L +  ++  
Sbjct: 434 RGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPE 493

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A    D M ++    D   Y + +DGLCK+  I +A  LF  +R      D+  Y+ +I 
Sbjct: 494 AESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIH 553

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             CK   L  A+++   +     + DVVTY+ +I+ LC  G +DKA D+F +M
Sbjct: 554 SFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEM 606



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/356 (35%), Positives = 198/356 (55%), Gaps = 7/356 (1%)

Query: 15   CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
            C PN+FT+  LI+GLCR G    A  L +EM       GV    N + +  +I GLC   
Sbjct: 873  CSPNMFTFTILIHGLCRAGDIGTAYELLKEMP----RHGV--PQNVILHNVVIKGLCSAR 926

Query: 75   FVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D A ELF +M++  +  P+V TY++++     +   ++A  L  +M+ +G  PNVV++
Sbjct: 927  KLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTY 986

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            + +++ LCK GK+DEA+ LL+ M + G  PN   YNT++DG C  GR++ A  L   M  
Sbjct: 987  SSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 1046

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             GC+ NV +Y++L++ +CK  + E A+ L   M+ KG  P++  YN+L     +  +VER
Sbjct: 1047 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 1106

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
            A +L   M + G   +  +Y T I GLCK   + E V L   +       DI  +N +ID
Sbjct: 1107 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 1166

Query: 314  GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +CK+ R+ IA+ELF  +       ++VTYN ++H LC   + D+A  L  +M  K
Sbjct: 1167 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRK 1222



 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/405 (33%), Positives = 205/405 (50%), Gaps = 43/405 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  LF ++   G + +   + +++ GLC  G    A+  F EM+         C P++
Sbjct: 178 LPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-------TCPPDS 230

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+GL K   +D A  L  +M D    PNV +YN+++HGFC AN    A  L  +
Sbjct: 231 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 290

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  P+VVS+  ++N LCK  ++DEA R+++ MIQ G +PN   Y TL+DGFC  G 
Sbjct: 291 MVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A EL   M   G + N  +Y+ +++ +C+  ++E A  +   M+  G  PD + Y+T
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR------ 294
           +  G  +  ++  A  L ++M R G   D     T ID LCK   I  A EL R      
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470

Query: 295 ------TLRILKYEL-----------------------DIRAYNCLIDGLCKSGRLKIAW 325
                    IL + L                       D+  YN ++DGLCKS R+  A+
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM-EAK 369
            LF  +    ++ DVVTY+I+IH+ C D  +D A  +   M EAK
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAK 575



 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 194/396 (48%), Gaps = 29/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  +  K+   GC+PNV TY TL++G CR G    A+ L  +M         +      
Sbjct: 318 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 377

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C P+ + Y+TII G CK G + +A +L  +M      
Sbjct: 378 HVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCR 437

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+V   ++LI   C A   + A+ L    +     P+VV+++++++ LCK  ++ EA   
Sbjct: 438 PDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESW 497

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L++M++    P+   YN+++DG C + R+N A  LF  M + G   +V +YSI+I+ +CK
Sbjct: 498 LDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCK 557

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +  ++ A  +   M      PDVV Y+ L  GL +   V++AF +F EM   G A +   
Sbjct: 558 DNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVT 617

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T IDGLCK   + +A E+   +R      D   Y CLI+GLC + RL+ AW + R + 
Sbjct: 618 YNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMK 677

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
               + D +TY  ++ AL     ++    L  +MEA
Sbjct: 678 DKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 161/315 (51%), Gaps = 42/315 (13%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
             A  L   +   GC PNV +YNT+I GLC+       + L E+M + N      C P+ V
Sbjct: 1106 RACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN------CVPDIV 1159

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK------ 115
            T+ TIID +CK   VD A ELF  +++    PN+VTYNSL+HG C +  +++A+      
Sbjct: 1160 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219

Query: 116  --------------------C----------LFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                                C          LF++M+  G+ P+ V+++++++ LCK   
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279

Query: 146  MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            MDEA+ +LELM++ G  P A  Y TL+DGFC TG +++A E+   + S G   +V ++SI
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339

Query: 206  LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
             I+   K   +  A  L   ML  G+ PD V YNTL  G  +    E A  LF+ M++ G
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG 1399

Query: 266  VAADTWAYRTFIDGL 280
               D   Y T +  L
Sbjct: 1400 CEPDNATYTTLVGHL 1414



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 189/391 (48%), Gaps = 43/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +  +F  N L+N L +      A +LF   +   G++G     +TVTY+T+I G  + 
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFR--SRIEGQWG----GDTVTYSTLISGFIRA 174

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A ELF +M  + +  +   + S++ G C A   ++A   F E M +   P+ V++
Sbjct: 175 GKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTCPPDSVTY 233

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N L K+ ++D+A RLLE M+  G  PN F YNT++ GFC   RV  A  L   M +
Sbjct: 234 NTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVT 293

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI----- 248
            GC  +V SY+ +ING CK  +++ A  +  +M+ +G +P+V+ Y TL  G   +     
Sbjct: 294 RGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDG 353

Query: 249 ------------------------------HQVERAFKLFDEMQRHGVAADTWAYRTFID 278
                                         + +ERA ++   M + G   D   Y T I 
Sbjct: 354 AVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIIS 413

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G CK G + EA +L   +       D+   + LID LCK+  +  A EL R         
Sbjct: 414 GFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP 473

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DVV Y+I+IHALC   ++ +A   +LD+  K
Sbjct: 474 DVVAYSILIHALCKAKRLPEAES-WLDVMVK 503



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 42/288 (14%)

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
           +W E +         G Q  +   N ++N L K  +  +A  L    I+     +   Y+
Sbjct: 114 EWAETR--------DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYS 165

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMG---------------------------------- 195
           TL+ GF   G++  A ELF  M   G                                  
Sbjct: 166 TLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT 225

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  +  +Y+ +ING  K+  ++ A+ L  EM+  G  P+V  YNT+  G  + ++VE A 
Sbjct: 226 CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENAL 285

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M   G   D  +Y T I+GLCK   + EA  +   +     + ++  Y  L+DG 
Sbjct: 286 WLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGF 345

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           C+ G L  A EL R +       + +TYN ++H  C    M++A  + 
Sbjct: 346 CRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVL 393



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 3/210 (1%)

Query: 158  QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            Q G   + +  N L+       R   A  L V    + C  N+F+++ILI+G C+  +I 
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDA--LQVYRNKLCCSPNMFTFTILIHGLCRAGDIG 894

Query: 218  GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTF 276
             A  L  EM   G+  +V+++N +  GL    +++ A +LF EM+  G    D + Y T 
Sbjct: 895  TAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954

Query: 277  IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
            +D L K+G + +A  L   +       ++  Y+ L+ GLCK+G+L  A  L + + R   
Sbjct: 955  VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014

Query: 337  IADVVTYNIMIHALCADGKMDKARDLFLDM 366
              ++VTYN +I   C  G++D+A  L  +M
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEM 1044



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 58/270 (21%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  L   +   G  P+  TYNTL+ G C    T  A++LFE M          C+P+  
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCG------CEPDNA 1405

Query: 62   TYTTIIDGLC-KEGFVDKAKELFLKMKDENI----------------------------- 91
            TYTT++  L  K+ + D   E+   M D                                
Sbjct: 1406 TYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDM 1465

Query: 92   -----NP-------------NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                 +P             NVV +++++  + +     +A  L+  M  +GV+P+ V+F
Sbjct: 1466 FGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTF 1525

Query: 134  NVIMNELCKNGKMDEA-SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
              ++   C  G +D A    + +    G+ P    ++ ++D     G VN AE+L   M 
Sbjct: 1526 LSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDL---ML 1582

Query: 193  SMGCKHNVFSYSILINGYCKNKEIEGALSL 222
             M CK +  +++ L++ Y    + E AL +
Sbjct: 1583 GMPCKPSAATWNCLLSAYKICGDFERALRV 1612


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 193/327 (59%), Gaps = 6/327 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC+P++ TY  ++NGLC+ G T +ALNL  +M     E       N V
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE------ANVV 254

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+T+ID LCK    D A  LF +M+++ + PNV+TY+SLI   C    W++A  L  +M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + PN+V+F+ +++   K GK+ +A +L E MI+  + PN F Y++L++GFC+  R+
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+++   M    C  NV +Y+ LING+CK K ++  + L+ EM  +G+  + V Y TL
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+    + A  +F +M   GV  +   Y   +DGLCKNG + +A+ +F  L+    
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELF 328
           E DI  YN +I+G+CK+G+ K+    F
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGIYF 521



 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 194/354 (54%), Gaps = 6/354 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G +P+  T+ TLI+GL        A+ L + M          C+P+ V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG------CQPDLV 219

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G  D A  L  KM+   I  NVV Y+++I   C     ++A  LF EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+PNV++++ +++ LC  G+  +ASRLL  MI+  + PN   ++ L+D F   G++
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +AE+L+  M       N+F+YS LING+C    +  A  +   M+ K   P+VV YNTL
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +V++  +LF EM + G+  +T  Y T I G  +      A  +F+ +  +  
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
             +I  YN L+DGLCK+G+L  A  +F  L R  +  D+ TYNIMI  +C  GK
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513



 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 180/358 (50%), Gaps = 6/358 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+ + G   N++TYN LIN  CR     +AL L  +M     E      P+ VT  ++++
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYE------PDIVTLNSLLN 156

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G C    +  A  L  +M +    P+ VT+ +LIHG    N  +EA  L   M+ +G QP
Sbjct: 157 GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           ++V++  ++N LCK G  D A  LL  M    +  N  +Y+T++D  C     + A  LF
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ME+ G + NV +YS LI+  C       A  L S+M+ + I P++V ++ L     + 
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++ +A KL++EM +  +  + + Y + I+G C    + EA ++   +       ++  Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N LI+G CK+ R+    ELFR + +  L+ + VTY  +IH        D A+ +F  M
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 185/353 (52%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  ++ L++ + +     + ++  E+M       G+    N  TY  +I+  C+   +
Sbjct: 76  PSIIEFSKLLSAIAKMNKFDLVISFGEKME----ILGI--SHNLYTYNILINCFCRCSRL 129

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  L  KM      P++VT NSL++GFC+ N  ++A  L  +M++ G +P+ V+F  +
Sbjct: 130 SLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L  + K  EA  L++ M+Q G +P+   Y  +++G C  G  + A  L   ME+   
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV  YS +I+  CK +  + AL+L++EM +KG++P+V+ Y++L   L    +   A +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M    +  +   +   ID   K G +V+A +L+  +     + +I  Y+ LI+G C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              RL  A ++   + R   + +VVTYN +I+  C   ++DK  +LF +M  +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 6/190 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L+ ++     +PN+FTY++LING C       A  + E M   +      C PN 
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD------CLPNV 393

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   VDK  ELF +M    +  N VTY +LIHGF  A D + A+ +F +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV PN++++N++++ LCKNGK+ +A  + E + +  + P+ + YN +++G C  G+
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513

Query: 181 VNRAEELFVS 190
                  FV+
Sbjct: 514 WKMGGIYFVA 523



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 126/257 (49%)

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
           + ++A  LF  M      P+++ F+ +++ + K  K D      E M  +G+  N + YN
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L++ FC   R++ A  L   M  +G + ++ + + L+NG+C    I  A++L  +M+  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G KPD V + TL  GLF  ++   A  L D M + G   D   Y   ++GLCK G    A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           + L   +   K E ++  Y+ +ID LCK      A  LF  +    +  +V+TY+ +I  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 350 LCADGKMDKARDLFLDM 366
           LC  G+   A  L  DM
Sbjct: 298 LCNYGRWSDASRLLSDM 314



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 145/291 (49%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF  M      P+++ ++ L+      N ++       +M   G+  N+ ++N+
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A  LL  M+++G  P+    N+L++GFC   R++ A  L   M  MG
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K +  +++ LI+G   + +   A++L   M+ +G +PD+V Y  +  GL +    + A 
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M+   + A+   Y T ID LCK  +  +A+ LF  +       ++  Y+ LI  L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  ++VT++ +I A    GK+ KA  L+ +M
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 112/225 (49%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           ++D+A  L  +M Q    P+   ++ L+       + +        ME +G  HN+++Y+
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN +C+   +  AL+L  +M+  G +PD+V  N+L  G    +++  A  L D+M   
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   DT  + T I GL  +    EAV L   +     + D+  Y  +++GLCK G   +A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L   +    + A+VV Y+ +I +LC     D A +LF +ME K
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)

Query: 196 CKHNVFS------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           C+   FS      Y  ++     + E++ A+ L+  M      P ++ ++ L   + +++
Sbjct: 33  CRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN 92

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           + +      ++M+  G++ + + Y   I+  C+   +  A+ L   +  L YE DI   N
Sbjct: 93  KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            L++G C   R+  A  L   +       D VT+  +IH L    K  +A
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202


>gi|356561776|ref|XP_003549154.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 567

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 143/364 (39%), Positives = 203/364 (55%), Gaps = 16/364 (4%)

Query: 14  GCEPNVFTYNTL------INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           G EP + T NT+      +NGLC+ G T  AL   ++M   N E      PN V Y  I+
Sbjct: 142 GLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESLKKMVKRNLE------PNVVVYNAIL 195

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC-YANDWNEAKCLFIEMM-DQG 125
           DGLCK G V +A  LF +M   N+ PNVVTYN LI G C     W E   LF EM+ ++G
Sbjct: 196 DGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMVAEKG 255

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+V +F++++N  CK G +  A  ++  MI+IGV  N   YN+L+ G+CL  R+  A 
Sbjct: 256 IVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAV 315

Query: 186 ELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
            +F  M  E  GC  +V +Y+ LI+G+CK K++  A+SL SEM+ KG+ PDV  + +L  
Sbjct: 316 RVFDLMVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDVFTWTSLIG 375

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G FE+ +   A +LF  M+  G           +DGL K     EA+ LFR +     +L
Sbjct: 376 GFFEVGKPLAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDL 435

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           DI  YN ++DG+CK G+L  A +L   +    L  D  T+NIMI  LC +G +D A +L 
Sbjct: 436 DIVIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELL 495

Query: 364 LDME 367
             M+
Sbjct: 496 RKMK 499



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 133/271 (49%), Gaps = 6/271 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTVTYTTIIDGLCK 72
           G E NV TYN+LI+G C       A+ +F+ M   G G     C P+ VTY ++I G CK
Sbjct: 290 GVELNVVTYNSLISGYCLRNRMEEAVRVFDLMVREGEG-----CLPSVVTYNSLIHGWCK 344

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              V+KA  L  +M  + ++P+V T+ SLI GF        AK LFI M DQG  P + +
Sbjct: 345 VKKVNKAMSLLSEMVGKGLDPDVFTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQT 404

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
             V+++ L K     EA  L   M + G+  +  +YN ++DG C  G++N A +L   + 
Sbjct: 405 CAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVL 464

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G K + ++++I+I G C+   ++ A  L  +M   G  P+   YN    GL   + + 
Sbjct: 465 VKGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDIS 524

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           R+ K    M+  G   D       I  L  N
Sbjct: 525 RSRKYLQIMKDKGFPVDATTAELLIRFLSAN 555



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 177/403 (43%), Gaps = 79/403 (19%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLC-RTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EA  LF ++ V   EPNV TYN LI GLC   G     + LF EM     E G+V  P+ 
Sbjct: 206 EALGLFYEMGVVNVEPNVVTYNCLIQGLCGEVGGWREGVGLFNEMV---AEKGIV--PDV 260

Query: 61  VTYTTIIDGLCKEGFVDKAKEL-------------------------------------F 83
            T++ +++G CKEG + +A+ +                                      
Sbjct: 261 QTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVVTYNSLISGYCLRNRMEEAVRVFDL 320

Query: 84  LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN 143
           +  + E   P+VVTYNSLIHG+C     N+A  L  EM+ +G+ P+V             
Sbjct: 321 MVREGEGCLPSVVTYNSLIHGWCKVKKVNKAMSLLSEMVGKGLDPDV------------- 367

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
                                 F + +L+ GF   G+   A+ELF++M+  G    + + 
Sbjct: 368 ----------------------FTWTSLIGGFFEVGKPLAAKELFITMKDQGQVPILQTC 405

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +++++G  K      A++L+  M   G+  D+VIYN +  G+ ++ ++  A KL   +  
Sbjct: 406 AVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDIVIYNIMLDGMCKMGKLNDARKLLSFVLV 465

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+  D++ +   I GLC+ G + +A EL R ++      +  +YN  + GL +   +  
Sbjct: 466 KGLKIDSYTWNIMIKGLCREGLLDDAEELLRKMKENGCPPNKCSYNVFVQGLLRKYDISR 525

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + +  + +       D  T  ++I  L A+ + D A   FL +
Sbjct: 526 SRKYLQIMKDKGFPVDATTAELLIRFLSANEE-DNAFQEFLQI 567



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 89/306 (29%), Positives = 142/306 (46%), Gaps = 13/306 (4%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ-PNVVSFN 134
           V  + + F +M   N  P +  +N L      +  +  A  L   +   G +  +V + N
Sbjct: 57  VSVSVDFFHRMLTLNPFPCIQDFNLLFGIVAKSQHFATAISLIKTLHSLGYEIADVCTLN 116

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT------GRVNRAEELF 188
           +++N LC+  K      +L LM +IG+ P     NT+ +G C+       G  + A E  
Sbjct: 117 ILINCLCRLRKTTLGFAVLGLMTKIGLEPTLVTLNTIANGLCIVNGLCKIGDTSGALESL 176

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF-E 247
             M     + NV  Y+ +++G CK   +  AL L+ EM    ++P+VV YN L  GL  E
Sbjct: 177 KKMVKRNLEPNVVVYNAILDGLCKRGLVGEALGLFYEMGVVNVEPNVVTYNCLIQGLCGE 236

Query: 248 IHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +        LF+EM    G+  D   +   ++G CK G ++ A  +   +  +  EL++ 
Sbjct: 237 VGGWREGVGLFNEMVAEKGIVPDVQTFSILVNGFCKEGLLLRAESMVGFMIRIGVELNVV 296

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPR---GVLIADVVTYNIMIHALCADGKMDKARDLF 363
            YN LI G C   R++ A  +F  + R   G L   VVTYN +IH  C   K++KA  L 
Sbjct: 297 TYNSLISGYCLRNRMEEAVRVFDLMVREGEGCL-PSVVTYNSLIHGWCKVKKVNKAMSLL 355

Query: 364 LDMEAK 369
            +M  K
Sbjct: 356 SEMVGK 361



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/165 (24%), Positives = 79/165 (47%), Gaps = 6/165 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  LF+ ++  G  P + T   +++GL +      A+ LF  M     +  +      
Sbjct: 384 LAAKELFITMKDQGQVPILQTCAVVLDGLYKCWLDSEAMTLFRAMEKSGLDLDI------ 437

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  ++DG+CK G ++ A++L   +  + +  +  T+N +I G C     ++A+ L  +
Sbjct: 438 VIYNIMLDGMCKMGKLNDARKLLSFVLVKGLKIDSYTWNIMIKGLCREGLLDDAEELLRK 497

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           M + G  PN  S+NV +  L +   +  + + L++M   G   +A
Sbjct: 498 MKENGCPPNKCSYNVFVQGLLRKYDISRSRKYLQIMKDKGFPVDA 542


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  241 bits (614), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/363 (36%), Positives = 206/363 (56%), Gaps = 7/363 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF  +   G   N   +N LI+   + G    A+ +F EM  G G      +P+ VTY+T
Sbjct: 426 LFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEM-QGQG-----VRPDVVTYST 479

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I   C+ G +  A E F +M    + PN V Y+SLIHGFC   D  +AK L  EMM +G
Sbjct: 480 LISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKG 539

Query: 126 V-QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + +PN+V F+ I++ LC  G++ +A  +  L+I IG RP    +N+L+DG+CL G++ +A
Sbjct: 540 IPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 599

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +  +M S+G + +V +Y+ L++GYCK+ +I+  L L+ EML K +KP  V Y+ +  G
Sbjct: 600 FGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDG 659

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           LF   +   A K+F EM   G A D   Y+  + GLC+N    EA+ LF  L  +  + D
Sbjct: 660 LFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFD 719

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I   N +I+ L K  R + A +LF ++    L+ +V TY +MIH L  +G +++A  +F 
Sbjct: 720 ITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFS 779

Query: 365 DME 367
            ME
Sbjct: 780 SME 782



 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 188/359 (52%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC PN  +YNT+I  LC    +  AL++ + MA   G     C P+ V++ T
Sbjct: 214 LLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR----CSPDVVSFNT 269

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G  K+G V KA  L  +M  + + P+VVTYNS++   C A   ++A+ +  +M+D+G
Sbjct: 270 VIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKG 329

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+P+ +++  I++    +G   E++++   M   G+ P    +N+ M   C  GR   AE
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAE 389

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F  M + G   ++ SYSIL++GY          +L+  M  KGI  +   +N L    
Sbjct: 390 EIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A  +F EMQ  GV  D   Y T I   C+ G + +A+E F  +  +  E + 
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y+ LI G C  G L  A EL    + +G+   ++V ++ +IH+LC +G++  A D+F
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVF 568



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 195/391 (49%), Gaps = 42/391 (10%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V ++NT+I+G  + G    A NL  EM     E      P+ VTY +I+D LCK  
Sbjct: 260 CSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVE------PDVVTYNSIVDALCKAR 313

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +DKA+ +  +M D+ + P+ +TY ++IHG+  +  W E+  +F +M  +G+ P +V+FN
Sbjct: 314 AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFN 373

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
             M+ LCK+G+  +A  + + M   G  P+   Y+ L+ G+   GR      LF SM   
Sbjct: 374 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   N   ++ILI+ + K   ++ A+ +++EM  +G++PDVV Y+TL      + ++  A
Sbjct: 434 GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADA 493

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL------------------ 296
            + F +M   G+  +T  Y + I G C +G +V+A EL   +                  
Sbjct: 494 MEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIH 553

Query: 297 ------RILKYE------------LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
                 R++                 I  +N LIDG C  G+++ A+ +  ++    +  
Sbjct: 554 SLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEP 613

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DVVTYN ++   C  GK+D    LF +M  K
Sbjct: 614 DVVTYNTLVSGYCKSGKIDDGLILFREMLHK 644



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 183/370 (49%), Gaps = 9/370 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTV 61
             A F +L   G        NT +  LC    T  A++ L   M++      + C PN +
Sbjct: 175 GPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSD------LGCVPNAI 228

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +Y T+I  LC +    +A ++  +M  E    +P+VV++N++IHGF    + ++A  L  
Sbjct: 229 SYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLIN 288

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +GV+P+VV++N I++ LCK   MD+A  +L  M+  GV P+   Y  ++ G+  +G
Sbjct: 289 EMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSG 348

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
               + ++F  M S G    + +++  ++  CK+   + A  ++  M +KG  PD+V Y+
Sbjct: 349 HWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYS 408

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G     +      LF  M   G+ A+   +   I    K G + EA+ +F  ++  
Sbjct: 409 ILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQ 468

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+  Y+ LI   C+ GRL  A E F  +    L  + V Y+ +IH  C  G + KA
Sbjct: 469 GVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKA 528

Query: 360 RDLFLDMEAK 369
           ++L  +M +K
Sbjct: 529 KELVSEMMSK 538



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 167/344 (48%), Gaps = 7/344 (2%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTV-TYTTIIDGLCKEGFVDKAKELFLKMKD 88
           C  G  +V L LF  +     E G    P +V TY  ++D  C+    D     F ++  
Sbjct: 128 CSNGPALV-LALFNRICRE--EAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLR 184

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEA-KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
             +    +  N+ +   C+A   +EA   L   M D G  PN +S+N ++  LC + +  
Sbjct: 185 AGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQ 244

Query: 148 EASRLLELMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           EA  +++ M + G R  P+   +NT++ GF   G V++A  L   M   G + +V +Y+ 
Sbjct: 245 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNS 304

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++  CK + ++ A  +  +M+ KG++PD + Y  +  G       + + K+F +M   G
Sbjct: 305 IVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKG 364

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +      + +F+  LCK+G   +A E+F+ +    +  D+ +Y+ L+ G    GR     
Sbjct: 365 LIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMN 424

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LF S+    ++A+   +NI+I A    G MD+A  +F +M+ +
Sbjct: 425 NLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQ 468



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 147/318 (46%), Gaps = 30/318 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           +A   F ++   G EPN   Y++LI+G C  G  + A  L  EM                
Sbjct: 492 DAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSI 551

Query: 47  -----------NGNGEFGVVC----KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                      + +  F +V     +P  VT+ ++IDG C  G ++KA  +   M    I
Sbjct: 552 IHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGI 611

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+VVTYN+L+ G+C +   ++   LF EM+ + V+P  V+++++++ L   G+   A +
Sbjct: 612 EPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKK 671

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +   MI  G   +   Y  L+ G C     + A  LF  + +M CK ++   + +IN   
Sbjct: 672 MFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALY 731

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K +  E A  L++ + + G+ P+V  Y  +   L +   VE A  +F  M++ G A  + 
Sbjct: 732 KVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSR 791

Query: 272 AYRTFIDGLCKNGYIVEA 289
                I  L + G IV+A
Sbjct: 792 LLNDIIRMLLQKGDIVKA 809



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 127/254 (50%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +F  +   G  P + T+N+LI+G C  G    A  + + M +      V  +P+ 
Sbjct: 562 MDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS------VGIEPDV 615

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ G CK G +D    LF +M  + + P  VTY+ ++ G  +A   + AK +F E
Sbjct: 616 VTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHE 675

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G   ++ ++ +++  LC+N   DEA  L   +  +  + +  + NT+++      R
Sbjct: 676 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRR 735

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   NV +Y ++I+   K   +E A +++S M   G  P   + N 
Sbjct: 736 REEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLND 795

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + +A
Sbjct: 796 IIRMLLQKGDIVKA 809



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 76/178 (42%), Gaps = 6/178 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   G   ++ TY  L+ GLCR   T  A+ LF ++        + CK +   
Sbjct: 669 AKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG------AMDCKFDITI 722

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T+I+ L K    ++A +LF  +    + PNV TY  +IH         EA  +F  M 
Sbjct: 723 LNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSME 782

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             G  P+    N I+  L + G + +A   +  +    +   A   + LM  F   G+
Sbjct: 783 KSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 840



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVEAVELFRTLRILKY 301
             + A  LFDE+ R G      A   F+  L        C NG  +  + LF   RI + 
Sbjct: 89  STDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNGPAL-VLALFN--RICRE 145

Query: 302 E-------LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           E       L +  Y  L+D  C++ R  +    F  L R  L    +  N  +  LC   
Sbjct: 146 EAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAK 205

Query: 355 KMDKARDLFL 364
           + D+A D+ L
Sbjct: 206 RTDEAVDVLL 215


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  240 bits (613), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 205/366 (56%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A  + L   G   + F+Y +LINGLC+ G T  AL L ++M         + +PN +
Sbjct: 143 KAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEED------LVRPNLI 196

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+IDGLCK+  +  A  LF  +    I  +VV YNSLIHG C    W EA  L   M
Sbjct: 197 TYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMM 256

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P+  +FN++++ LCK G++ EA  +  +M++ G +P+   YN LM+GFCL+  V
Sbjct: 257 VRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNV 316

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF  M   G + +V +Y++LINGYCK   ++ A+ L+ E+  K + P++  YN+L
Sbjct: 317 SEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSL 376

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ ++    +L DEM   G + D   Y  F+D  CK+    +A+ LFR + +   
Sbjct: 377 IDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI-VQGI 435

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y+ +++  CK  +LKIA E  + L       +V TY IMI+ALC D   D+A  
Sbjct: 436 WPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMT 495

Query: 362 LFLDME 367
           L   M+
Sbjct: 496 LLSKMD 501



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 182/361 (50%), Gaps = 6/361 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF +L   G  P++ T   LIN  C   H   A +L   +     + G   +PN VT
Sbjct: 74  AISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTIL----KMGF--QPNMVT 127

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+I+G C  G V KA    L +  +    +  +Y SLI+G C      +A  L  +M 
Sbjct: 128 FNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKME 187

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  V+PN+++++ +++ LCK+  + +A RL  L+   G+  +   YN+L+ G C  G+  
Sbjct: 188 EDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWR 247

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M       + ++++IL++  CK   I  A  +++ M+ +G KPD+V YN L 
Sbjct: 248 EATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALM 307

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G    + V  A +LF+ M + G+  D   Y   I+G CK   + EA+ LF+ +R     
Sbjct: 308 EGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLV 367

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  YN LIDGLCK GR+    EL   +       D+VTYNI + A C     +KA  L
Sbjct: 368 PNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISL 427

Query: 363 F 363
           F
Sbjct: 428 F 428



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 2/314 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            P    +  ++  + + G    A  LF ++  + I P++ T   LI+ +C+    + A  
Sbjct: 52  PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFS 111

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL-LELMIQIGVRPNAFVYNTLMDGF 175
           L   ++  G QPN+V+FN ++N  C NG + +A    L+LM + G   + F Y +L++G 
Sbjct: 112 LLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK-GYPLDEFSYGSLINGL 170

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G+   A +L   ME    + N+ +YS +I+G CK++ I  AL L+S + S+GI  DV
Sbjct: 171 CKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDV 230

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V YN+L  G   + Q   A +L   M R  +  D + +   +D LCK G IVEA  +F  
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAV 290

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +     + DI  YN L++G C S  +  A ELF  + +  L  DV+ YN++I+  C    
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350

Query: 356 MDKARDLFLDMEAK 369
           +D+A  LF ++  K
Sbjct: 351 VDEAMVLFKEIRCK 364



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 145/288 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD     F +M  ++  P +  ++ L+        +  A  LF ++  +G+ P++ +  +
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTI 95

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C    +  A  LL  ++++G +PN   +NTL++GFC+ G V++A    + + + G
Sbjct: 96  LINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKG 155

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              + FSY  LING CKN +   AL L  +M    ++P+++ Y+T+  GL +   +  A 
Sbjct: 156 YPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADAL 215

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +LF  +   G+  D  AY + I G C  G   EA  L   +       D   +N L+D L
Sbjct: 216 RLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDAL 275

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           CK GR+  A  +F  + +     D+VTYN ++   C    + +AR+LF
Sbjct: 276 CKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELF 323



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 147/269 (54%), Gaps = 7/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F  +   G +P++ TYN L+ G C + +   A  LF  M     E      P+ 
Sbjct: 282 VEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLE------PDV 335

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  +I+G CK   VD+A  LF +++ +N+ PN+ TYNSLI G C     +  + L  E
Sbjct: 336 LNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDE 395

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G  P++V++N+ ++  CK+   ++A  L   ++Q G+ P+ ++Y+ +++ FC   +
Sbjct: 396 MCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEK 454

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  AEE    +   GC  NV +Y+I+IN  CK+   + A++L S+M      PD V + T
Sbjct: 455 LKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFET 514

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +   L E ++ ++A KL  EM   G+  D
Sbjct: 515 IIGALQERNETDKAEKLRLEMIERGLVND 543



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 127/249 (51%)

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M+ +   P +  F+ ++  + + G    A  L   +   G+ P+      L++ +C 
Sbjct: 43  FNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCH 102

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              ++ A  L  ++  MG + N+ +++ LING+C N  +  A++   ++++KG   D   
Sbjct: 103 QAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFS 162

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y +L  GL +  Q   A +L  +M+   V  +   Y T IDGLCK+  I +A+ LF  + 
Sbjct: 163 YGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVT 222

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                +D+ AYN LI G C  G+ + A  L   + RG +  D  T+NI++ ALC +G++ 
Sbjct: 223 SRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIV 282

Query: 358 KARDLFLDM 366
           +A+ +F  M
Sbjct: 283 EAQGVFAVM 291



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 52/123 (42%)

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           + H V+     F+ M R       + +   +  + + G+   A+ LF  L        I 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               LI+  C    L  A+ L  ++ +     ++VT+N +I+  C +G + KA    LD+
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 367 EAK 369
            AK
Sbjct: 152 MAK 154


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 127/343 (37%), Positives = 191/343 (55%), Gaps = 9/343 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VFTYN LI+GLC+   T  A  +  EM +     GV   P+TVT+ +I+DGLCK G  
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVD----RGVT--PDTVTFNSIMDGLCKAGKF 61

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A  L   M + N  P+  TYN+LI G C   + + AK L  E +  G  P+VV+++++
Sbjct: 62  ERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSIL 121

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
            + LCK G++DEA  L++ M   G  PN   YNTL+DG C   +  +A EL  ++ S G 
Sbjct: 122 ADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGF 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y+I+++G CK   ++ AL +   ML +G  P V+ Y  L  GL    +V+ A  
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F EM      AD  AY + ++G CK+    EA ++   +R   Y   I  YN L+DG C
Sbjct: 242 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYC 298

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K GRL     +F  +     + ++ TYNI++  LC  GK+D+A
Sbjct: 299 KEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEA 341



 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 198/361 (54%), Gaps = 14/361 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC PN+ TYNTLI+GLC+   T  A  L E + +     G V  P+ V
Sbjct: 133 EAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSS----GFV--PDVV 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT I+DGLCKEG +DKA ++   M      P+V+TY +L+ G C     +EA  +F EM
Sbjct: 187 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR--PNAFVYNTLMDGFCLTG 179
           + +    + +++  ++N  CK+ +  EA ++++     G+R  P   VYN LMDG+C  G
Sbjct: 247 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEG 301

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R++    +F  M   GC  N+ +Y+I+++G CK+ +++ A      M S G  PDVV YN
Sbjct: 302 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYN 361

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GLF+  + + A ++ D+M + G+  D   Y T +   CK     +AV + + +   
Sbjct: 362 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA 421

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR-GVLIADVVTYNIMIHALCADGKMDK 358
             + D   YN LI GL ++ RL  A+EL   + R G +++   TYN +I  LC +G + +
Sbjct: 422 GVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQ 481

Query: 359 A 359
           A
Sbjct: 482 A 482



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 191/367 (52%), Gaps = 13/367 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ +  ++   G  P+  T+N++++GLC+ G    A +L   MA  N      C+P+  
Sbjct: 28  KASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN------CRPSCC 81

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GLCK+  VD+AK L  +       P+VVTY+ L  G C     +EA  L  EM
Sbjct: 82  TYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM 141

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN+V++N +++ LCK  K ++A  LLE ++  G  P+   Y  ++DG C  GR+
Sbjct: 142 SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRL 201

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A ++   M   GC  +V +Y+ L+ G C+   ++ A  ++ EM+SK    D + Y +L
Sbjct: 202 DKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSL 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTW--AYRTFIDGLCKNGYIVEAVELFRTLRIL 299
             G  +  + + A K+ D     G+    +   Y   +DG CK G + E   +F  +   
Sbjct: 262 VNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 316

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +I+ YN ++DGLCK G++  A+    S+     + DVV+YNI+I  L    K  +A
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376

Query: 360 RDLFLDM 366
           R +   M
Sbjct: 377 RQVLDQM 383



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 167/312 (53%), Gaps = 3/312 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  TY  +IDGLCK    DKA E+  +M D  + P+ VT+NS++ G C A  +  A  L
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M ++  +P+  ++N +++ LCK   +D A  L++  +  G  P+   Y+ L DG C 
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCK 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR++ A EL   M   GC  N+ +Y+ LI+G CK  + E A  L   ++S G  PDVV 
Sbjct: 128 RGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVT 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  +  GL +  ++++A K+ + M + G       Y   ++GLC+ G + EA  +F+ + 
Sbjct: 188 YTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMV 247

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D  AY  L++G CKS R K A ++   + RG    DV  YN ++   C +G++D
Sbjct: 248 SKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI-RGTPYIDV--YNALMDGYCKEGRLD 304

Query: 358 KARDLFLDMEAK 369
           +  ++F DM  +
Sbjct: 305 EIPNVFEDMACR 316



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 187/356 (52%), Gaps = 13/356 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V TY  L+ GLCRTG    A ++F+EM + +      C  + + Y ++++G CK 
Sbjct: 215 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD------CTADALAYVSLVNGYCKS 268

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               +A+++   ++     P +  YN+L+ G+C     +E   +F +M  +G  PN+ ++
Sbjct: 269 SRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTY 325

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++M+ LCK+GK+DEA   LE M   G  P+   YN ++DG     +   A ++   M  
Sbjct: 326 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 385

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ L+  +CK +  + A+ +   M+  G+ PD V YNTL  GL + +++  
Sbjct: 386 AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGD 445

Query: 254 AFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           A++L  EM R+G V +    Y T ID LCK G + +A+ L   +     E +   YN  I
Sbjct: 446 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 505

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           D LCK GRL  A  L   +     + D V+Y  +I  LC   ++D+A  L  +M A
Sbjct: 506 DRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 558



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 150/275 (54%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M +  + P+V TYN LI G C A+  ++A  +  EM+D+GV P+ V+FN IM+ LCK GK
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            + A  LL +M +   RP+   YNTL+ G C    V+RA+ L     S G   +V +YSI
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +G CK   I+ A  L  EM   G  P++V YNTL  GL +  + E+A++L + +   G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   Y   +DGLCK G + +A+++   +        +  Y  L++GLC++GR+  A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +F+ +      AD + Y  +++  C   +  +A+
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 275



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 182/389 (46%), Gaps = 46/389 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  YN L++G C+ G      N+FE+MA         C PN  TY  ++DGLCK G V
Sbjct: 285 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG------CVPNIKTYNIVMDGLCKHGKV 338

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A      M      P+VV+YN +I G   A+   EA+ +  +M+  G+ P+ V++N +
Sbjct: 339 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           M + CK  + D+A  +L+ MI+ GV P+   YNTL+ G   T R+  A EL   M   GC
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458

Query: 197 ------------------------------------KHNVFSYSILINGYCKNKEIEGAL 220
                                               + N  +Y+I I+  CK   ++ A 
Sbjct: 459 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 518

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDG 279
           SL SEM       D V Y T+ IGL +  Q++RA KL  EM    G+   +  +   ID 
Sbjct: 519 SLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 575

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
             K   + EA+ L   +        +  YN +I  LCK  ++  AWELF  +    ++A 
Sbjct: 576 FTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVAS 635

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEA 368
            V+Y ++I+ LC  G+  +A  +  +M +
Sbjct: 636 SVSYTVLIYGLCGQGRGKEALQVLEEMAS 664



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 88/249 (35%), Positives = 141/249 (56%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ V P+V ++N++++ LCK  K D+AS +L  M+  GV P+   +N++MDG C  G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             RA  L   M    C+ +  +Y+ LI+G CK + ++ A +L  E +S G  PDVV Y+ 
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +++ AF+L  EM  +G   +   Y T IDGLCK     +A EL  TL    
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           +  D+  Y  ++DGLCK GRL  A ++   + +      V+TY  ++  LC  G++D+A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 361 DLFLDMEAK 369
            +F +M +K
Sbjct: 241 HIFKEMVSK 249



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 175/399 (43%), Gaps = 75/399 (18%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   +F  +   GC PN+ TYN +++GLC+ G    A    E M +        C P+ V
Sbjct: 305 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG------CVPDVV 358

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  IIDGL K     +A+++  +M    I P+ VTYN+L+  FC    +++A  +   M
Sbjct: 359 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 418

Query: 122 MDQGVQPNVVSFNV------------------------------------IMNELCKNGK 145
           +  GV P+ V++N                                     I++ LCK G 
Sbjct: 419 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 478

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG---------- 195
           + +A  L++ M   GV  N   YN  +D  C  GR++ A  L   M+++           
Sbjct: 479 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVII 538

Query: 196 --CKHNVF---------------------SYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             CK                         ++++LI+ + K K ++ AL+L   M+ +G  
Sbjct: 539 GLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCS 598

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P V+ YN +   L ++ +V++A++LFDEM   G+ A + +Y   I GLC  G   EA+++
Sbjct: 599 PSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQV 658

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
              +     E+D      L   L   GR + A EL R +
Sbjct: 659 LEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 205/347 (59%), Gaps = 6/347 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
            +N LI    + G    A+  F EM   NG      +P+ V+Y+T+I  LCK G V+ A 
Sbjct: 380 AFNILICAYAKHGAVDKAMTAFTEMRQ-NG-----LRPDVVSYSTVIHILCKIGRVEDAV 433

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
             F +M  E ++PN++++ SLIHG C   +W + + L  EM+++G+ P+ +  N IM+ L
Sbjct: 434 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 493

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G++ EA    +++I IGV+PN   YNTL+DG+C  G+++ + + F  M S+G + + 
Sbjct: 494 CKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDS 553

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           ++Y+ L+NGY KN  +E AL+LY EM  K +K   +  N +  GLF+  ++  A +L+ +
Sbjct: 554 WTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMK 613

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G       Y T + GLC+N  + EA+ +F  LR  ++ELD+  +N +I+ L K GR
Sbjct: 614 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGR 673

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  A  LF ++     +  V+TY++MI +   +G ++++ DLFL ME
Sbjct: 674 IDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSME 720



 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/359 (35%), Positives = 190/359 (52%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F ++   G  P+VF+YN LI GLC    +  AL L   M     + G  C PN V+Y+T
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHM---TADGGYNCSPNVVSYST 208

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           IIDG  KEG VDKA  LF +M  +   P+VVTY+SLI G C A   N+A+ +   M D+G
Sbjct: 209 IIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKG 268

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN  ++N+++   C  G+++EA RLL+ M   G++P+   Y  L+  +C  GR   A 
Sbjct: 269 VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEAR 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +F SM   G K N   Y IL++GY     +     L   M+  GI  +   +N L    
Sbjct: 329 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   V++A   F EM+++G+  D  +Y T I  LCK G + +AV  F  +       +I
Sbjct: 389 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNI 448

Query: 306 RAYNCLIDGLCKSGRLKIAWEL-FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ++  LI GLC  G  K   EL F  + RG+   D +  N ++  LC +G++ +A+D F
Sbjct: 449 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIH-PDAIFMNTIMDNLCKEGRVVEAQDFF 506



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 188/358 (52%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F ++R  G  P+V +Y+T+I+ LC+ G    A+  F +M +          PN +
Sbjct: 396 KAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG------LSPNII 449

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++T++I GLC  G   K +EL  +M +  I+P+ +  N+++   C      EA+  F  +
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMV 509

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+PNVVS+N +++  C  GKMDE+ +  + M+ IG+RP+++ YN L++G+   GRV
Sbjct: 510 IHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRV 569

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M     K    + +I+++G  +   I  A  LY +M+ +G +  +  YNT+
Sbjct: 570 EDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTV 629

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL E   V+ A ++F++++      D W +   I+ L K G I EA  LF  + +   
Sbjct: 630 LGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGP 689

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +  Y+ +I    + G L+ + +LF S+ +    AD    N++I  L   G + +A
Sbjct: 690 VPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRA 747



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 196/400 (49%), Gaps = 41/400 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P+V TY++LI+GLC+      A+N  E +     + GV+  PNT 
Sbjct: 221 KAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQ----AMNKAEAILQHMFDKGVM--PNTR 274

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G C  G +++A  L  KM    + P+VVTY  LI  +C      EA+ +F  M
Sbjct: 275 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSM 334

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI------------------------ 157
           + +G +PN   ++++++     G + +   LL+LMI                        
Sbjct: 335 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 394

Query: 158 -----------QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                      Q G+RP+   Y+T++   C  GRV  A   F  M S G   N+ S++ L
Sbjct: 395 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSL 454

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C   E +    L  EM+++GI PD +  NT+   L +  +V  A   FD +   GV
Sbjct: 455 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 514

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +  +Y T IDG C  G + E+++ F  +  +    D   YN L++G  K+GR++ A  
Sbjct: 515 KPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALA 574

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L+R + R  +    +T NI++H L   G++  AR+L++ M
Sbjct: 575 LYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKM 614



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/305 (31%), Positives = 152/305 (49%), Gaps = 4/305 (1%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKEL-FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
             VT   +I GLC     D A ++ F +M +    P+V +YN+LI G C      EA  L
Sbjct: 128 QNVTLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALEL 187

Query: 118 FIEMMDQG---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
            + M   G     PNVVS++ I++   K G++D+A  L + MI  G  P+   Y++L+DG
Sbjct: 188 LLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDG 247

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C    +N+AE +   M   G   N  +Y+I+I GYC   ++E A+ L  +M   G++PD
Sbjct: 248 LCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 307

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y  L     +I +   A  +FD M R G   ++  Y   + G    G +++  +L  
Sbjct: 308 VVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 367

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       + RA+N LI    K G +  A   F  + +  L  DVV+Y+ +IH LC  G
Sbjct: 368 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIG 427

Query: 355 KMDKA 359
           +++ A
Sbjct: 428 RVEDA 432



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 130/254 (51%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   F  +   G +PNV +YNTLI+G C  G    ++  F+ M +      +  +P++
Sbjct: 500 VEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVS------IGLRPDS 553

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +++G  K G V+ A  L+ +M  +++    +T N ++HG   A     A+ L+++
Sbjct: 554 WTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMK 613

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G Q  + ++N ++  LC+N  +DEA R+ E +       + + +N +++     GR
Sbjct: 614 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGR 673

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A+ LF +M   G   +V +YS++I    +   +E +  L+  M   G   D  + N 
Sbjct: 674 IDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNV 733

Query: 241 LFIGLFEIHQVERA 254
           +   L E   V RA
Sbjct: 734 IIRRLLEKGDVRRA 747



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 14/270 (5%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE-------ASRLLELMIQIGVR--- 162
           +A  LF E++ Q    +V +FN ++  + +             A  L   M + GV    
Sbjct: 32  DALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMMA 91

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
            N ++   L+  FC  GR++ A   F     MG +    + + LI G C  K  + A+ +
Sbjct: 92  ANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDM 151

Query: 223 -YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFID 278
            +  M   G  PDV  YN L  GL    + + A +L   M   G    + +  +Y T ID
Sbjct: 152 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIID 211

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G  K G + +A  LF  +    +  D+  Y+ LIDGLCK+  +  A  + + +    ++ 
Sbjct: 212 GFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMP 271

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +  TYNIMI   C+ G++++A  L   M  
Sbjct: 272 NTRTYNIMIRGYCSLGQLEEAVRLLKKMSG 301



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 70/163 (42%), Gaps = 11/163 (6%)

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI-------HQVERAFKLFDEMQRHGV--- 266
           E AL+L+ E+L +     V  +N++   +          H    A  LF+ M R GV   
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMARSGVNMM 90

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           AA+ +     I   C  G +  A   F     + + +     N LI GLC   R   A +
Sbjct: 91  AANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMD 150

Query: 327 L-FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           + FR +P      DV +YN +I  LC + K  +A +L L M A
Sbjct: 151 MVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTA 193


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  240 bits (612), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 204/365 (55%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +   K+   G EP++ T+ +L+NG CR      AL +F++M       G+  KPN V 
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV------GMGYKPNVVI 188

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIIDGLCK   VD A +L  +M+ + I P+VVTYNSLI G C +  W++A  +   M 
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+V +FN +++   K G++ EA    E MI+  + P+   Y+ L+ G C+  R++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEE+F  M S GC  +V +YSILINGYCK+K++E  + L+ EM  +G+  + V Y  L 
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     ++  A ++F  M   GV  +   Y   + GLC NG I +A+ +   ++    +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            DI  YN +I G+CK+G +  AW+++ SL    L+ D+ TY  M+  L   G   +A  L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488

Query: 363 FLDME 367
           F  M+
Sbjct: 489 FRKMK 493



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 195/364 (53%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ ++++ G   N+ T N L+N  CR     +AL+   +M     E      P+ VT+ +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE------PSIVTFGS 156

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++G C+   V  A  +F +M      PNVV YN++I G C +   + A  L   M   G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+VV++N +++ LC +G+  +A+R++  M +  + P+ F +N L+D     GRV+ AE
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E +  M       ++ +YS+LI G C    ++ A  ++  M+SKG  PDVV Y+ L  G 
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +VE   KLF EM + GV  +T  Y   I G C+ G +  A E+FR +       +I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN L+ GLC +G+++ A  +   + +  + AD+VTYNI+I  +C  G++  A D++  
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456

Query: 366 MEAK 369
           +  +
Sbjct: 457 LNCQ 460



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 179/331 (54%), Gaps = 8/331 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A  +F ++   G +PNV  YNT+I+GLC++     AL+L   M  +G G       P+ 
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDV 221

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY ++I GLC  G    A  +   M    I P+V T+N+LI         +EA+  + E
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P++V++++++  LC   ++DEA  +   M+  G  P+   Y+ L++G+C + +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +LF  M   G   N  +Y+ILI GYC+  ++  A  ++  M+  G+ P+++ YN 
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  ++E+A  +  +MQ++G+ AD   Y   I G+CK G + +A +++ +L    
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
              DI  Y  ++ GL K G  + A  LFR +
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKM 492



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 136/250 (54%), Gaps = 6/250 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VFT+N LI+   + G    A   +EEM   + +      P+ VTY+ +I GLC    +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD------PDIVTYSLLIYGLCMYSRL 307

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A+E+F  M  +   P+VVTY+ LI+G+C +        LF EM  +GV  N V++ ++
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C+ GK++ A  +   M+  GV PN   YN L+ G C  G++ +A  +   M+  G 
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +Y+I+I G CK  E+  A  +Y  +  +G+ PD+  Y T+ +GL++      A  
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487

Query: 257 LFDEMQRHGV 266
           LF +M+  G+
Sbjct: 488 LFRKMKEDGI 497



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 173/345 (50%), Gaps = 35/345 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   ++ ++  + K    D    L+ +M+   I  N+ T N L++ FC  +  + A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+  G +P++V+F  ++N  C+  ++ +A  + + M+ +G +PN  +YNT++DG C 
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN---------------KEI------ 216
           + +V+ A +L   ME  G   +V +Y+ LI+G C +               +EI      
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 217 ----------EGALS----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
                     EG +S     Y EM+ + + PD+V Y+ L  GL    +++ A ++F  M 
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G   D   Y   I+G CK+  +   ++LF  +       +   Y  LI G C++G+L 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +A E+FR +    +  +++TYN+++H LC +GK++KA  +  DM+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 148/294 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D + +LF  M      P++  ++ L+        ++    L+ +M   G+  N+ + N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A   L  MI++G  P+   + +L++GFC   RV  A  +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K NV  Y+ +I+G CK+K+++ AL L + M   GI PDVV YN+L  GL    +   A 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++   M +  +  D + +   ID   K G + EA E +  +     + DI  Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C   RL  A E+F  +       DVVTY+I+I+  C   K++    LF +M  +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 6/233 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   + ++     +P++ TY+ LI GLC       A  +F  M +        C P+ V
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVV 327

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+G CK   V+   +LF +M    +  N VTY  LI G+C A   N A+ +F  M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV PN++++NV+++ LC NGK+++A  +L  M + G+  +   YN ++ G C  G V
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
             A +++ S+   G   ++++Y+ ++ G  K      A +L+ +M   GI P+
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 117/232 (50%), Gaps = 4/232 (1%)

Query: 139 ELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           E+ +NG    K+D++  L   M+Q    P+   ++ L+       + +    L+  M+ +
Sbjct: 51  EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G  HN+ + +IL+N +C+  ++  ALS   +M+  G +P +V + +L  G     +V  A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +FD+M   G   +   Y T IDGLCK+  +  A++L   +       D+  YN LI G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LC SGR   A  +   + +  +  DV T+N +I A   +G++ +A + + +M
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 20/181 (11%)

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIK--------------------PDVVIYNTLFIGLF 246
           I G+C ++      S Y EML  GI+                    P +  ++ L   + 
Sbjct: 33  ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           ++ + +    L+++MQ  G+  +       ++  C+   +  A+     +  L +E  I 
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +  L++G C+  R+  A  +F  +       +VV YN +I  LC   ++D A DL   M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 367 E 367
           E
Sbjct: 213 E 213


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/347 (36%), Positives = 197/347 (56%), Gaps = 6/347 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           +Y TLINGLC+ G    AL L + +       G + +PN V Y  IID +CK   V+ A 
Sbjct: 177 SYGTLINGLCKVGRITAALQLLKRVD------GKLVQPNAVMYNMIIDNMCKAKLVNDAF 230

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L+ +M  + I+P+  T NSLI+GFC      EA  L  +M+ + + P + +F+++++  
Sbjct: 231 DLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAF 290

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK GK+ EA  +L + ++  +  +   YN+LMDG+CL   +N+A+++F SM S G   NV
Sbjct: 291 CKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANV 350

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            SY+ +ING CK K ++ A++L+ EM  + I P+VV YN+L  GL ++ ++    KL DE
Sbjct: 351 QSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDE 410

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G   +   Y + +D LCKN ++ +A+ L   L+      D+  Y  LI GLC+SG+
Sbjct: 411 MHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGK 470

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L+ A ++F  L       DV TY +MI   C  G  D A  L   ME
Sbjct: 471 LEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKME 517



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++ + G   + FT+N LIN   + G   ++ ++F ++     +      PN +T
Sbjct: 89  ALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFD------PNAIT 142

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+I GLC +G + +A     K+  +  + + V+Y +LI+G C       A  L   + 
Sbjct: 143 FNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVD 202

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + VQPN V +N+I++ +CK   +++A  L   M+   + P+ F  N+L+ GFC+ G++ 
Sbjct: 203 GKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLK 262

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M        ++++SIL++ +CK  +++ A  +    + K I  DVV YN+L 
Sbjct: 263 EAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLM 322

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + ++ +A  +FD M   GV A+  +Y T I+GLCK   + EAV LF  +R  K  
Sbjct: 323 DGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKII 382

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  YN LIDGL K G++    +L   +       +++TYN ++ ALC +  +DKA  L
Sbjct: 383 PNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIAL 442

Query: 363 FLDME 367
             +++
Sbjct: 443 LTNLK 447



 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 170/336 (50%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++      P+ FT N+LI G C  G    A+ L  +M   N        P   
Sbjct: 228 DAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILEN------INPRMY 281

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ ++D  CKEG V +AK +      ++I  +VVTYNSL+ G+C   + N+AK +F  M
Sbjct: 282 TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSM 341

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  NV S+  ++N LCK   +DEA  L E M    + PN   YN+L+DG    G++
Sbjct: 342 ASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKI 401

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +   +L   M   G   N+ +Y+ +++  CKN  ++ A++L + +  +GI+PD+  Y  L
Sbjct: 402 SCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVL 461

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A K+F+++   G   D + Y   I G C  G    A+ L   +     
Sbjct: 462 IKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGC 521

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             + + Y  +I  L +     +A +L R +  RG+L
Sbjct: 522 IPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLL 557



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 140/284 (49%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           +  +N  P ++ +N ++     A   + A  L  +M   G+  +  +FN+++N   + G 
Sbjct: 61  LHHKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGL 120

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
              +  +   +++ G  PNA  +NTL+ G CL G +++A      + + G   +  SY  
Sbjct: 121 NSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGT 180

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING CK   I  AL L   +  K ++P+ V+YN +   + +   V  AF L+ +M    
Sbjct: 181 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 240

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           ++ D +   + I G C  G + EAV L   + +      +  ++ L+D  CK G++K A 
Sbjct: 241 ISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAK 300

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +     +  +I DVVTYN ++   C   +++KA+D+F  M ++
Sbjct: 301 MMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASR 344


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 203/366 (55%), Gaps = 9/366 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCR--TGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           +L  ++  FG  PN++T + LIN  C    G    AL+LF++M       G   +P+ VT
Sbjct: 82  SLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKM------IGEGFRPDVVT 135

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+GLCK G    A  L   M  +N  PNV  YN++I   C      EA  LF EM+
Sbjct: 136 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 195

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P++ ++N +++ LC   +    + LL  M+   + P+   +NT++D  C  G+V 
Sbjct: 196 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 255

Query: 183 RAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A ++   M +  GC  NV SY+ LINGYCK + I+ A+ L+ EM  + + PD V Y+TL
Sbjct: 256 EAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 315

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A  LF EM       +   YR  +D LCKN Y+ EA+ L + +     
Sbjct: 316 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 375

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI+  N  IDG+C++G L+ A +LF +L    L  DV TY+IMI+ LC  G +D+A  
Sbjct: 376 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASK 435

Query: 362 LFLDME 367
           LF +M+
Sbjct: 436 LFREMD 441



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 92/278 (33%), Positives = 153/278 (55%), Gaps = 5/278 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V ++NT+++ LC+ G    A ++ ++M    G     C PN ++Y T+I+G CK   +
Sbjct: 236 PDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGG-----CMPNVISYNTLINGYCKIQRI 290

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKA  LF +M  + + P+ VTY++LIHG C+     +A  LF EM+     PN+V++ ++
Sbjct: 291 DKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRIL 350

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCKN  + EA  LL+ +    + P+  V N  +DG C  G +  A +LF ++ S G 
Sbjct: 351 LDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGL 410

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +V++YSI+ING C+   ++ A  L+ EM   G   +  IYNT+  G    ++  RA +
Sbjct: 411 QPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQ 470

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           L  EM   G +AD      F+  L  +G      ++ R
Sbjct: 471 LLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 508



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 161/345 (46%), Gaps = 30/345 (8%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVCK-------- 57
           C+PNVF YNT+I+ LC+      A NLF EM            N     +C         
Sbjct: 164 CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVA 223

Query: 58  ------------PNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHG 104
                       P+ V++ T++D LCKEG V +A ++  KM +     PNV++YN+LI+G
Sbjct: 224 TLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLING 283

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           +C     ++A  LF EM  Q + P+ V+++ +++ LC   ++ +A  L   M+     PN
Sbjct: 284 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 343

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              Y  L+D  C    +  A  L  ++E      ++   +I I+G C+  E+E A  L+S
Sbjct: 344 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 403

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            + SKG++PDV  Y+ +  GL     ++ A KLF EM  +G   +   Y T   G  +N 
Sbjct: 404 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 463

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
               A++L + +    +  D       +  L   G  +   ++ R
Sbjct: 464 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 508



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 148/311 (47%), Gaps = 38/311 (12%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN--------------------- 134
           +++N       + N  + A   F  M+     P+ V FN                     
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 135 --------------VIMNELCK--NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
                         +++N  C    GK+ EA  L + MI  G RP+   Y TL++G C  
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G  + A  L  SM    C+ NVF+Y+ +I+  CK++++  A +L+SEM++KGI PD+  Y
Sbjct: 147 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 206

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLR 297
           N+L   L  + + +    L +EM    +  D  ++ T +D LCK G + EA ++  + ++
Sbjct: 207 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 266

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++ +YN LI+G CK  R+  A  LF  + R  LI D VTY+ +IH LC   ++ 
Sbjct: 267 RGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 326

Query: 358 KARDLFLDMEA 368
            A  LF +M A
Sbjct: 327 DAIALFHEMVA 337



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 2/156 (1%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+GA+S ++ ML     P  V +N L   + ++        L  +M   G+  + +    
Sbjct: 42  IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101

Query: 276 FIDGLCK--NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            I+  C    G I EA+ LF  +    +  D+  Y  LI+GLCK G    A  L  S+ +
Sbjct: 102 LINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQ 161

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                +V  YN +I +LC D ++ +A +LF +M  K
Sbjct: 162 KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 197



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +     +P++   N  I+G+CR G    A +LF  +++         +P+  
Sbjct: 362 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKG------LQPDVW 415

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+GLC+ G +D+A +LF +M +     N   YN++  GF   N+ + A  L  EM
Sbjct: 416 TYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEM 475

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           + +G   +  +  + +  L  +G +D++   L+ +++   +  +++Y  +M
Sbjct: 476 VARGFSADASTMTLFVKMLSDDG-LDQS---LKQILRDFCKQKSWIYENVM 522


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 206/347 (59%), Gaps = 6/347 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
            +N LI    + G    A+  F EM   NG      +P+ V+Y+T+I  LCK G V+ A 
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQ-NG-----LRPDVVSYSTVIHILCKTGRVEDAV 430

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
             F +M  E ++PN++++ SLIHG C   +W + + L  EM+++G+ P+ +  N IM+ L
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G++ EA    +++I IGV+P+   YNTL+DG+C  G+++ + +    M S+G + + 
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           ++Y+ L+NGY KN  +E AL+LY EM  K +K   +  N +  GLF+  ++  A +L+ +
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMK 610

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G       Y T + GLC+N  + EA+ +F  LR  ++ELD+R ++ +I+ L K GR
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGR 670

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  A  LF ++     + DV+TY++MI +   +G ++++ +LFL ME
Sbjct: 671 IDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/359 (35%), Positives = 190/359 (52%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F ++   G  P+VF+YN LI GLC    +  AL L   M     + G  C PN V+Y T
Sbjct: 149 VFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHM---TADGGYNCSPNVVSYNT 205

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG  KEG VDKA  LF +M  + + P+VVTYNSLI G C A   ++A  +   M D+G
Sbjct: 206 VIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKG 265

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P+  ++N+++   C  G+++EA RLL+ M   G++P+   Y+ L+  +C  GR   A 
Sbjct: 266 VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEAR 325

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +F SM   G K N   Y IL++GY     +     L   M+  GI  +   +N L    
Sbjct: 326 SVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAY 385

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   V++A   F EM+++G+  D  +Y T I  LCK G + +AV  F  +       +I
Sbjct: 386 AKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNI 445

Query: 306 RAYNCLIDGLCKSGRLKIAWEL-FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ++  LI GLC  G  K   EL F  + RG+   D +  N ++  LC +G++ +A+D F
Sbjct: 446 ISFTSLIHGLCSIGEWKKVEELAFEMINRGIH-PDAIFMNTIMDNLCKEGRVVEAQDFF 503



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 200/400 (50%), Gaps = 41/400 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P+V TYN+LI+GLC+      A+ + + M      F     P+T 
Sbjct: 218 KAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHM------FDKGVMPDTR 271

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G C  G +++A  L  KM    + P+VVTY+ LI  +C      EA+ +F  M
Sbjct: 272 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSM 331

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +PN   ++++++     G + +   LL+LMI+ G+      +N L+  +   G V
Sbjct: 332 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAV 391

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A   F  M   G + +V SYS +I+  CK   +E A+  +++M+S+G+ P+++ + +L
Sbjct: 392 DKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSL 451

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  I + ++  +L  EM   G+  D     T +D LCK G +VEA + F  +  +  
Sbjct: 452 IHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGV 511

Query: 302 ELDIRAYNCLIDGLC-----------------------------------KSGRLKIAWE 326
           + D+ +YN LIDG C                                   K+GR++ A  
Sbjct: 512 KPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALA 571

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L+R + R  +    +T NIM+H L   G++  AR+L++ M
Sbjct: 572 LYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKM 611



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/305 (31%), Positives = 152/305 (49%), Gaps = 4/305 (1%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKEL-FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
             VT   +I GLC     D A ++ F +M +    P+V +YN+LI G C      EA  L
Sbjct: 125 QNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALEL 184

Query: 118 FIEMMDQG---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
            I M   G     PNVVS+N +++   K G++D+A  L   M+  G+ P+   YN+L+DG
Sbjct: 185 LIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDG 244

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C    +++A  +   M   G   +  +Y+I+I GYC   ++E A+ L  +M   G++PD
Sbjct: 245 LCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPD 304

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+ L     +I +   A  +FD M R G   ++  Y   + G    G +++  +L  
Sbjct: 305 VVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLD 364

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       + RA+N LI    K G +  A   F  + +  L  DVV+Y+ +IH LC  G
Sbjct: 365 LMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTG 424

Query: 355 KMDKA 359
           +++ A
Sbjct: 425 RVEDA 429



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/331 (29%), Positives = 150/331 (45%), Gaps = 5/331 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDK-AKELFLKMKDENINPNVV 96
           ALNLF+E+        V    + +T     D           A  LF  M    +N    
Sbjct: 33  ALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMMAA 92

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-EL 155
               LI  FC     + A   F   +  G +   V+ N ++  LC   + D+A  ++   
Sbjct: 93  IIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRR 152

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG---CKHNVFSYSILINGYCK 212
           M ++G  P+ F YN L+ G C+  +   A EL + M + G   C  NV SY+ +I+G+ K
Sbjct: 153 MPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFK 212

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E++ A  L+ EM+ +G+ PDVV YN+L  GL +   +++A  +   M   GV  DT  
Sbjct: 213 EGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRT 272

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I G C  G + EAV L + +     + D+  Y+ LI   CK GR   A  +F S+ 
Sbjct: 273 YNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMV 332

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           R     +   Y+I++H     G +   RDL 
Sbjct: 333 RKGQKPNSTIYHILLHGYATKGALIDVRDLL 363



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 146/304 (48%), Gaps = 11/304 (3%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK-------CLFIEMMDQGVQPN 129
           + A  LF ++  +    +V  +NS++     A+  +  +        LF  M+  GV   
Sbjct: 31  EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL-F 188
                +++   C  G++D A     L ++ G R      N L+ G C   R + A ++ F
Sbjct: 91  AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVIYNTLFIGL 245
             M  +G   +VFSY+ LI G C  K+ + AL L   M + G     P+VV YNT+  G 
Sbjct: 151 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGF 210

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           F+  +V++A+ LF EM   G+  D   Y + IDGLCK   + +AV + + +       D 
Sbjct: 211 FKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDT 270

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           R YN +I G C  G+L+ A  L + +    L  DVVTY+++I   C  G+  +AR +F  
Sbjct: 271 RTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDS 330

Query: 366 MEAK 369
           M  K
Sbjct: 331 MVRK 334



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 134/258 (51%), Gaps = 14/258 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   F  +   G +P+V +YNTLI+G C  G    ++   + M +      +  +P++
Sbjct: 497 VEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS------IGLRPDS 550

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY ++++G  K G V+ A  L+ +M  +++    +T N ++HG   A     A+ L+++
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMK 610

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM----IQIGVRPNAFVYNTLMDGFC 176
           M+D+G Q  + ++N ++  LC+N  +DEA R+ E +     ++ VR  + V N L+    
Sbjct: 611 MVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLK--- 667

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR++ A+ LF +M   G   +V +YS++I  + +   +E + +L+  M   G   D  
Sbjct: 668 -VGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSH 726

Query: 237 IYNTLFIGLFEIHQVERA 254
           + N +   L E   V RA
Sbjct: 727 MLNIIVRRLLEKGDVRRA 744


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 205/367 (55%), Gaps = 17/367 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  NV T+ TL+NGLCR G  + AL L + M     +      P+ VTY TI++G+CK 
Sbjct: 5   GCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQ------PDAVTYGTIVNGMCKL 58

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A  +  KM +  I  NVV Y++++   C   +  +A+ +F EM ++G+ PNV+++
Sbjct: 59  GDTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTY 118

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C  GK  +A +LL  MI+  + P+   ++ L++ F   G+V+ AEEL+  M  
Sbjct: 119 NCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG--------- 244
                   +YS +I+G+CK+  +E A  ++  M+SKG  PD++  NTL  G         
Sbjct: 179 RNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLI 238

Query: 245 --LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               ++  V  A  LF EM  +GV+ D     T + GLC+NG + +A+E+F+  +  K +
Sbjct: 239 HGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMD 298

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LD    N +I+G+CK  ++  AW+LF SLP   +  DVVTYNI+I     +G   +A D+
Sbjct: 299 LDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDI 358

Query: 363 FLDMEAK 369
           +L+M  K
Sbjct: 359 YLEMLCK 365



 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 208/377 (55%), Gaps = 17/377 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A AL  ++   G +P+  TY T++NG+C+ G T+ ALN+  +M           K N 
Sbjct: 27  LQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ------IKANV 80

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ I+D LCK+G   KA+ +F +M ++ I PNV+TYN +I G+C    W++A+ L  +
Sbjct: 81  VIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRD 140

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV+F+ ++N   K GK+  A  L   M++  + P    Y++++DGFC   R
Sbjct: 141 MIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSR 200

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE--IEG---------ALSLYSEMLSK 229
           +  A+ +F  M S GC  ++ + + LI+G C+ K   I G         A  L+ EM+S 
Sbjct: 201 LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISN 260

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G+ PD+V  NTL  GL E  ++E+A ++F   Q+  +  DT      I+G+CK   + EA
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +LF +L +   E D+  YN LI    K G    A +++  +    +I   VTYN M+  
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380

Query: 350 LCADGKMDKARDLFLDM 366
            C   ++++AR +   M
Sbjct: 381 FCKQNRLEEARQMVDSM 397



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 189/363 (52%), Gaps = 17/363 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V T++ LIN   + G    A  L+ EM   N        P T+TY+++IDG CK   
Sbjct: 147 DPDVVTFSALINAFVKEGKVSGAEELYREMLRRN------IFPTTITYSSMIDGFCKHSR 200

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLI-----------HGFCYANDWNEAKCLFIEMMDQ 124
           ++ AK +F  M  +  +P+++T N+LI           HGFC   + N A+ LF EM+  
Sbjct: 201 LEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISN 260

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P++V+ N ++  LC+NGK+++A  + ++  +  +  +    N +++G C   +V+ A
Sbjct: 261 GVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEA 320

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +LF S+   G + +V +Y+ILI  + K      A  +Y EML KGI P  V YN++  G
Sbjct: 321 WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDG 380

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             + +++E A ++ D M   G + D   + T I G CK G + + +ELF  +       D
Sbjct: 381 FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVAD 440

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              YN LI G CK G L  A ++F  +    +  D +T+  M+  LC   ++ K   +  
Sbjct: 441 TITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500

Query: 365 DME 367
           D++
Sbjct: 501 DLQ 503



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 148/261 (56%), Gaps = 6/261 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G  P++ T NTL+ GLC  G    AL +F+       +       +T T
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL------DTAT 303

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              II+G+CK   VD+A +LF  +    +  +VVTYN LI  F    ++  A+ +++EM+
Sbjct: 304 CNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEML 363

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ V++N +++  CK  +++EA ++++ M+  G  P+   ++TL+ G+C  GRV+
Sbjct: 364 CKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVD 423

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              ELF  M   G   +  +Y+ LI+G+CK  ++ GA  ++ EM+S G+ PD + + ++ 
Sbjct: 424 DGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSML 483

Query: 243 IGLFEIHQVERAFKLFDEMQR 263
            GL    ++++   + +++Q+
Sbjct: 484 AGLCTKAELQKGLTMLEDLQK 504



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 137/289 (47%), Gaps = 46/289 (15%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G   NVV+F  +MN LC+ G++ +A  L++ M++ G +P+A  Y T+++G C  G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  +   M+    K NV  YS +++  CK+     A ++++EM  KGI P+V+ YN 
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 241 LFIG-----------------------------------LFEIHQVERAFKLFDEMQRHG 265
           +  G                                     +  +V  A +L+ EM R  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS------- 318
           +   T  Y + IDG CK+  + +A  +F  +       DI   N LIDG C++       
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHG 240

Query: 319 ----GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
               G + +A +LF+ +    +  D+VT N ++  LC +GK++KA ++F
Sbjct: 241 FCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMF 289



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 106/214 (49%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G   N   + TLM+G C  GRV +A  L   M   G + +  +Y  ++NG CK  +
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              AL++  +M    IK +VVIY+ +   L +     +A  +F EM   G+  +   Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDG C  G   +A +L R +     + D+  ++ LI+   K G++  A EL+R + R  
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    +TY+ MI   C   +++ A+ +F  M +K
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSK 214



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 85/154 (55%), Gaps = 6/154 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  +++++   G  P+  TYN++++G C+      A  + + M +        C P+ 
Sbjct: 353 LRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG------CSPDV 406

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT++T+I G CK G VD   ELF +M    +  + +TYN+LIHGFC   D N A+ +F E
Sbjct: 407 VTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEE 466

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           M+  GV P+ ++F  ++  LC   ++ +   +LE
Sbjct: 467 MVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLE 500


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 196/354 (55%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+++TYN+LI+GLC+ G    A+ + ++M + +      C PN VTY  II  LCKE
Sbjct: 338 GLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD------CSPNAVTYNAIISSLCKE 391

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A E+   +  + I P+V T+NSLI G C +++   A  LF EM  +G +P+  ++
Sbjct: 392 NRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTY 451

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC + K++EA  LL+ M   G   N  +YNTL+DGFC   R+  AEE+F  ME 
Sbjct: 452 NMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMEL 511

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ LI+G CK+K +E A  L  +M+ +G++PD   YN+L     +   +++
Sbjct: 512 QGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKK 571

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M   G   D   Y T I GLCK G +  A  L R++++    L   AYN +I 
Sbjct: 572 AADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQ 631

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDM 366
            L K  R   A  LFR +       D +TY I+   LC   G + +A D  ++M
Sbjct: 632 ALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEM 685



 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 128/353 (36%), Positives = 193/353 (54%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ FTYNTL+NGLC+ GH   A+ + + M  G         P+  TY ++I GLCK 
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGG------LDPDIYTYNSLISGLCKL 356

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A ++  +M   + +PN VTYN++I   C  N  +EA  +   +  +G+ P+V +F
Sbjct: 357 GEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTF 416

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LC +     A  L E M   G RP+ F YN L+D  C + ++  A  L   ME 
Sbjct: 417 NSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMEL 476

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  NV  Y+ LI+G+CKNK IE A  ++ EM  +G+  D V YNTL  GL +  +VE 
Sbjct: 477 NGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVED 536

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L D+M   G+  D + Y + +   CK G I +A ++ +T+       DI  Y  LI 
Sbjct: 537 AAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLIS 596

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+GR+++A  L RS+    ++     YN +I AL    +  +A  LF +M
Sbjct: 597 GLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREM 649



 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 198/357 (55%), Gaps = 6/357 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           +GC     T N LING C+ G    AL+  +E  +         +P+  TY T+++GLCK
Sbjct: 267 YGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEG------FRPDQFTYNTLVNGLCK 320

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G    A E+   M    ++P++ TYNSLI G C   +  EA  +  +M+ +   PN V+
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVT 380

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N I++ LCK  ++DEA+ +  L+   G+ P+   +N+L+ G CL+     A +LF  M+
Sbjct: 381 YNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMK 440

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC+ + F+Y++LI+  C ++++E AL+L  EM   G   +VVIYNTL  G  +  ++E
Sbjct: 441 GKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIE 500

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++FDEM+  GV+ D+  Y T IDGLCK+  + +A +L   + +     D   YN L+
Sbjct: 501 EAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLL 560

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              CK+G +K A ++ +++       D+VTY  +I  LC  G++  A  L   ++ K
Sbjct: 561 THFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK 617



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 180/349 (51%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V T+N LI  LC+      A+ + EEM +    +G+   P+  T+TTI+ G  + G +D
Sbjct: 202 DVSTFNILIKALCKAHQVRPAILMMEEMPS----YGL--SPDETTFTTIMQGYIEGGNLD 255

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A  +  +M +       VT N LI+GFC     ++A     E + +G +P+  ++N ++
Sbjct: 256 GALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLV 315

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK G    A  +++ M+  G+ P+ + YN+L+ G C  G +  A ++   M S  C 
Sbjct: 316 NGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCS 375

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  +Y+ +I+  CK   ++ A  +   + SKGI PDV  +N+L  GL      + A  L
Sbjct: 376 PNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDL 435

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F+EM+  G   D + Y   ID LC +  + EA+ L + + +     ++  YN LIDG CK
Sbjct: 436 FEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCK 495

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + R++ A E+F  +    +  D VTYN +I  LC   +++ A  L   M
Sbjct: 496 NKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQM 544



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/316 (34%), Positives = 172/316 (54%), Gaps = 7/316 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   L   G  P+V T+N+LI GLC + +   A++LFEEM  G G     C+P+  
Sbjct: 396 EATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEM-KGKG-----CRPDEF 449

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC    +++A  L  +M+      NVV YN+LI GFC      EA+ +F EM
Sbjct: 450 TYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEM 509

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QGV  + V++N +++ LCK+ ++++A++L++ MI  G+RP+ F YN+L+  FC TG +
Sbjct: 510 ELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDI 569

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M S GC  ++ +Y+ LI+G CK   ++ A  L   +  KG+      YN +
Sbjct: 570 KKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPV 629

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF+ ++   A +LF EM       D   Y+    GLC   G I EAV+    +    
Sbjct: 630 IQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERG 689

Query: 301 YELDIRAYNCLIDGLC 316
              +  ++  L +GLC
Sbjct: 690 NIPEFSSFVMLAEGLC 705



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 96/311 (30%), Positives = 153/311 (49%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           KP+T  Y  +++ L     +   +     M    I  +V T+N LI   C A+    A  
Sbjct: 165 KPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAIL 224

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  EM   G+ P+  +F  IM    + G +D A R+ E M++ G        N L++GFC
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFC 284

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+++A        S G + + F+Y+ L+NG CK    + A+ +   ML  G+ PD+ 
Sbjct: 285 KQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIY 344

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN+L  GL ++ ++E A K+ D+M     + +   Y   I  LCK   + EA E+ R L
Sbjct: 345 TYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLL 404

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+  +N LI GLC S   K A +LF  +       D  TYN++I +LC+  K+
Sbjct: 405 TSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKL 464

Query: 357 DKARDLFLDME 367
           ++A +L  +ME
Sbjct: 465 EEALNLLKEME 475



 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 168/354 (47%), Gaps = 7/354 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   Y  ++  L + G       + EEM     EF      +   +   ++   K    
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEF------DRGIFLIFVESYGKFELY 148

Query: 77  DKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           D+   +   M+DE  I P+   YN L++    AN     +     M+ + ++ +V +FN+
Sbjct: 149 DEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNI 208

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LCK  ++  A  ++E M   G+ P+   + T+M G+   G ++ A  +   M   G
Sbjct: 209 LIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG 268

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C     + ++LING+CK   I+ ALS   E +S+G +PD   YNTL  GL +I   + A 
Sbjct: 269 CPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAM 328

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++ D M   G+  D + Y + I GLCK G I EAV++   +       +   YN +I  L
Sbjct: 329 EVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSL 388

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK  R+  A E+ R L    ++ DV T+N +I  LC       A DLF +M+ K
Sbjct: 389 CKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   GC P++ TY TLI+GLC+ G   VA  L   +       G+V  P+  
Sbjct: 571 KAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMK----GMVLTPHA- 625

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  +I  L K     +A  LF +M D++  P+ +TY  +  G C       EA    +E
Sbjct: 626 -YNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVE 684

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+++G  P   SF ++   LC     D   +L++++++
Sbjct: 685 MIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVDMIME 722


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/350 (36%), Positives = 196/350 (56%), Gaps = 6/350 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FTY TLINGL + G    AL+L +EM   +       +PN V Y+ +IDGLCK+GFV  A
Sbjct: 161 FTYGTLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDGFVSDA 214

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
             L  ++ +  I  + VTYNSLI G C    W E   L  +M+ + V P+  +FN++++ 
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LCK G++ EA  +L +M + G +P+   YN LM+G+C    V+ A ELF  M   G + +
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V +Y++LI+GYCK K ++ A+ L+ E+ +K + P +  YN+L  GL    ++    KL D
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           EM       D   Y   ID LCK G I+EA+ +   +     + +I  YN ++DG C   
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +A ++F  + +  L  D++ YN++I+  C    +D+A  LF +M  K
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504



 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 201/367 (54%), Gaps = 7/367 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +   +   G +P++ TYN L+ G C   +   A  LF  M     E      P+ 
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE------PDV 335

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  +IDG CK   VD+A  LF ++ ++N+ P + +YNSLI G C +   +  K L  E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+VV++N++++ LCK G++ EA  +L +M++ GV+PN   YN +MDG+CL   
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           VN A+++F  M   G + ++ +Y++LINGYCK + ++ A+ L+ EM  K + PD+  YN+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL  + ++    +L DEM   G + D   Y   +D  CK     +A+ LFR + +  
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEG 574

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D    + ++D LCK  +LK+A +  + L       +V TY I+I+ALC DG   +A 
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634

Query: 361 DLFLDME 367
            L   ME
Sbjct: 635 LLLSKME 641



 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 187/346 (54%), Gaps = 6/346 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  TYN+LI+G C  G       L  +M   N +      P+  T+  +ID LCKEG + 
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD------PDDYTFNILIDALCKEGRIL 282

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+ +   M      P++VTYN+L+ G+C   + +EA+ LF  M+ +G++P+V+++NV++
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK   +DEA  L + +    + P    YN+L+DG C +GR++  ++L   M      
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +V +Y+ILI+  CK   I  AL +   M+ KG+KP++V YN +  G    + V  A  +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F+ M + G+  D   Y   I+G CK   + EA+ LF+ +R      DI +YN LIDGLC 
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            GR+    EL   +       DV+TYNI++ A C     DKA  LF
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF 568



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF +L+  G  P++ T+  LIN      HT  A +L   +     +      PN VT
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQ------PNLVT 127

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + TII+G C  G + KA +    +  +    +  TY +LI+G         A  L  EM 
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              VQPN+V ++ +++ LCK+G + +A  L   + + G+  +A  YN+L+DG C  GR  
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              +L   M       + ++++ILI+  CK   I  A  + + M  +G KPD+V YN L 
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G      V  A +LF+ M + G+  D   Y   IDG CK   + EA+ LF+ L      
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             I +YN LIDGLC SGR+    +L   +       DVVTYNI+I ALC +G++ +A  +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 363 FLDMEAK 369
            + M  K
Sbjct: 428 LVMMMKK 434



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 165/337 (48%), Gaps = 6/337 (1%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           CR  +   A+  F  M        V   P T  +  ++  + + G    A  LF +++ +
Sbjct: 31  CRFRNVDDAVTCFNRMVR------VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
            I+P++ T+  LI+ + + +    A  L   ++  G QPN+V+FN I+N  C NG + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
               + ++  G   + F Y TL++G    G++  A  L   ME    + N+  YS LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK+  +  AL L S++  +GI  D V YN+L  G   + + +   +L  +M R  V  D
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
            + +   ID LCK G I+EA  +   +     + DI  YN L++G C    +  A ELF 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +  L  DV+ YN++I   C    +D+A  LF ++
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 141/266 (53%), Gaps = 7/266 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  + + +   G +PN+ TYN +++G C   +  VA ++F  M     E      P+ 
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE------PDI 475

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  +I+G CK   VD+A  LF +M+ +N+ P++ +YNSLI G C        + L  E
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G  P+V+++N++++  CK    D+A  L   +++ G+ P+ +  + ++D  C   +
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK 594

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  AE+    +   GC  NV +Y+ILIN  CK+     A+ L S+M      PD + +  
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV 266
           +   L + ++ ++A KL +EM   G+
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 126/267 (47%)

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
           H  C   + ++A   F  M+     P    F+ ++  + + G    A  L   +   G+ 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+   +  L++ +        A  L  ++   G + N+ +++ +ING+C N  I  AL  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
              +L++G   D   Y TL  GL +  Q++ A  L  EM++  V  +   Y   IDGLCK
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +G++ +A+ L   +      LD   YN LIDG C  GR +   +L   + R  +  D  T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           +NI+I ALC +G++ +A+ +   M  +
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKR 294


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 199/375 (53%), Gaps = 11/375 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC PNV TY+ LINGLC+ G    A  L +EM   + +      PN +
Sbjct: 90  EARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV----LPNII 145

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TY + +DGLCK+    +A EL   ++D +  ++P+ VT+++LI G C     +EA  +F 
Sbjct: 146 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 205

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G  PNV+++N ++N LCK  KM+ A  ++E M+  GV P+   Y+ L+D FC   
Sbjct: 206 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 265

Query: 180 RVNRAEELFVSMESMGCKHNVF-----SYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           RV+ A EL   M S GC  NV      +++ILI G CK    E A +L+ EM++K ++PD
Sbjct: 266 RVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 325

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V+ +  L  GL +  QVE A  + D M   GV  +   Y   + GLCK+G I EA +   
Sbjct: 326 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 385

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       D   Y  L+  LC++ R   A +L   L       D VTYNI++  L   G
Sbjct: 386 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 445

Query: 355 KMDKARDLFLDMEAK 369
           K ++A  +  +M  K
Sbjct: 446 KTEQAITVLEEMVGK 460



 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 202/373 (54%), Gaps = 17/373 (4%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF +L   G  P+V TYNTLI+ LC+ G    A  L  +M++        C PN VTY+ 
Sbjct: 59  LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRG------CVPNVVTYSV 112

Query: 66  IIDGLCKEGFVDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           +I+GLCK G +D+A+EL  +M  K  ++ PN++TYNS + G C  +   EA C  +  + 
Sbjct: 113 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA-CELMRSLR 171

Query: 124 QG---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            G   V P+ V+F+ +++ LCK G++DEA  + + MI  G  PN   YN L++G C   +
Sbjct: 172 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 231

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV----- 235
           + RA  +  SM   G   +V +YS+L++ +CK   ++ AL L   M S+G  P+V     
Sbjct: 232 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDK 291

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V +N L  G  +    E+A  LF+EM    +  D   +   IDGLCK G +  A ++   
Sbjct: 292 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDL 351

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  L    ++  YN L+ GLCKSGR++ A +    +     + D +TY  +++ALC   +
Sbjct: 352 MGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASR 411

Query: 356 MDKARDLFLDMEA 368
            D A  L  ++++
Sbjct: 412 TDDALQLVSELKS 424



 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/357 (36%), Positives = 192/357 (53%), Gaps = 20/357 (5%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           V  YN ++  LCR G T  AL +F  EMA      GV   P  VTY TII+GLCK   + 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARD----GVA--PTIVTYNTIINGLCKSNDLG 54

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
              ELF ++ +   +P+VVTYN+LI   C A D  EA+ L  +M  +G  PNVV+++V++
Sbjct: 55  AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLI 114

Query: 138 NELCKNGKMDEASRLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME--S 193
           N LCK G++DEA  L++ M +    V PN   YN+ +DG C       A EL  S+   S
Sbjct: 115 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 174

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +    +  ++S LI+G CK  +I+ A S++ +M++ G  P+V+ YN L  GL +  ++ER
Sbjct: 175 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 234

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR-------TLRILKYELDIR 306
           A  + + M   GV  D   Y   +D  CK   + EA+EL         T  +L    D  
Sbjct: 235 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVP--DKV 292

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +N LI G CK+G  + A  LF  +    L  DV+T+  +I  LC  G+++ ARD+ 
Sbjct: 293 TFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 349



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 116/373 (31%), Positives = 193/373 (51%), Gaps = 13/373 (3%)

Query: 2   EAAALFMKLR--VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           EA  L   LR       P+  T++TLI+GLC+ G    A ++F++M  G    G V  PN
Sbjct: 162 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAG----GYV--PN 215

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TY  +++GLCK   +++A  +   M D+ + P+V+TY+ L+  FC A+  +EA  L  
Sbjct: 216 VITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 275

Query: 120 EMMDQGVQPNV-----VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
            M  +G  PNV     V+FN+++   CK G  ++AS L E M+   ++P+   +  L+DG
Sbjct: 276 GMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDG 335

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C  G+V  A ++   M ++G   NV +Y+ L++G CK+  IE A     EM+S G  PD
Sbjct: 336 LCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPD 395

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
            + Y +L   L    + + A +L  E++  G   DT  Y   +DGL K+G   +A+ +  
Sbjct: 396 SITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLE 455

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +    ++ D   +     GL +SG L    EL R +    ++ D  T + ++  +C  G
Sbjct: 456 EMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSG 515

Query: 355 KMDKARDLFLDME 367
           K+D  + +  + E
Sbjct: 516 KLDDVKAMIKEFE 528



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 149/281 (53%), Gaps = 7/281 (2%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFI-EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           V  YN ++   C A D   A  +F  EM   GV P +V++N I+N LCK+  +     L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           E +++ G  P+   YNTL+D  C  G +  A  L   M S GC  NV +YS+LING CK 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 214 KEIEGALSLYSEMLSKG--IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAA 268
             I+ A  L  EM  K   + P+++ YN+   GL +      A +L   + R G   V+ 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL-RDGSLRVSP 179

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           DT  + T IDGLCK G I EA  +F  +    Y  ++  YN L++GLCK+ +++ A  + 
Sbjct: 180 DTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMI 239

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            S+    +  DV+TY++++ A C   ++D+A +L   M ++
Sbjct: 240 ESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASR 280


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 136/403 (33%), Positives = 221/403 (54%), Gaps = 44/403 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A++   K+   G EP++ T+ +LING C       A+++  +M     E G+  KP+ V 
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV----EMGI--KPDVVM 179

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTTIID LCK G V+ A  LF +M++  I P+VV Y SL++G C +  W +A  L   M 
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + ++P+V++FN +++   K GK  +A  L   MI++ + PN F Y +L++GFC+ G V+
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL-------------------- 222
            A ++F  ME+ GC  +V +Y+ LING+CK K+++ A+ +                    
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359

Query: 223 ---------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH--- 264
                          +S M+S+G+ P++  YN L   L    +V++A  +F++MQ+    
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           GVA + W Y   + GLC NG + +A+ +F  +R  + ++ I  Y  +I G+CK+G++K A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             LF SLP   +  +VVTY  MI  L  +G   +A  LF  M+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 171/332 (51%), Gaps = 6/332 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL+LF  M            P+ + +T +++ + K    D    L   ++   ++ ++ T
Sbjct: 56  ALDLFTHMVESRP------LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            N L++ FC ++    A     +MM  G +P++V+F  ++N  C   +M+EA  ++  M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G++P+  +Y T++D  C  G VN A  LF  ME+ G + +V  Y+ L+NG C +    
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A SL   M  + IKPDV+ +N L     +  +   A +L++EM R  +A + + Y + I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +G C  G + EA ++F  +       D+ AY  LI+G CK  ++  A ++F  + +  L 
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +TY  +I      GK + A+++F  M ++
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 150/270 (55%), Gaps = 9/270 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L+ ++      PN+FTY +LING C  G    A  +F  M          C P+ 
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG------CFPDV 317

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT++I+G CK   VD A ++F +M  + +  N +TY +LI GF      N A+ +F  
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFCL 177
           M+ +GV PN+ ++NV+++ LC NGK+ +A  + E M +    GV PN + YN L+ G C 
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++ +A  +F  M        + +Y+I+I G CK  +++ A++L+  + SKG+KP+VV 
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           Y T+  GLF       A  LF +M+  GV+
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 146/272 (53%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y  ++    ++  +NEA  LF  M++    P+++ F  ++N + K  K D    L + + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +GV  + +  N LM+ FC + +   A      M  +G + ++ +++ LING+C    +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+S+ ++M+  GIKPDVV+Y T+   L +   V  A  LFD+M+ +G+  D   Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC +G   +A  L R +   K + D+  +N LID   K G+   A EL+  + R  + 
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ++ TY  +I+  C +G +D+AR +F  ME K
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 10/174 (5%)

Query: 204 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           S  +  +C  +EI            AL L++ M+     P ++ +  L   + ++ + + 
Sbjct: 31  SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV 90

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              L D +Q  GV+ D +     ++  C++     A      +  L +E DI  +  LI+
Sbjct: 91  VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G C   R++ A  +   +    +  DVV Y  +I +LC +G ++ A  LF  ME
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/363 (36%), Positives = 208/363 (57%), Gaps = 9/363 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++  K+   G EPN  T+ TLI G+C  G    AL LF +    +G      K + V+Y 
Sbjct: 66  SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEAL-LFHDHVVAHG-----FKLDQVSYA 119

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +++GLCK G    A ++  K     +N +VV Y+++I   C      +A  L+ EM+ +
Sbjct: 120 ILMNGLCKMGETRAAMQMLRKTW---VNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAK 176

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PNV +F+++++ LCK+ K  +A  LL +M++ GV+PN   Y  +MDG+CL  +VN+A
Sbjct: 177 GIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKA 236

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +F  M   G + NV+ Y+I+ING CK K ++ A++L+ EM  K I PDVV YN L  G
Sbjct: 237 LNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDG 296

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++ ++  + +L DEM+  G   D   Y + +  LCKN ++ +A+ L + ++    + +
Sbjct: 297 LCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPN 356

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  LIDGLCK GRL+ A+ +F+ +        V TYN+MI+ LC  G  D+A  L  
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLS 416

Query: 365 DME 367
            ME
Sbjct: 417 RME 419



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 193/354 (54%), Gaps = 15/354 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  +N ++  L +  H   A++LF ++     EF  + KP+ VT T +++  C  G +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQL-----EFNGI-KPSIVTLTILMNCYCHTGGI 61

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
                +  K+      PN +T+ +LI G C      EA      ++  G + + VS+ ++
Sbjct: 62  TFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAIL 121

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           MN LCK G+   A ++L    +  V  +  +Y+T++D  C    V  A  L+  M + G 
Sbjct: 122 MNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGI 178

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV+++SIL++  CK+++ + A++L + M+ KG+KP+VV Y  +  G   ++QV +A  
Sbjct: 179 FPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALN 238

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F+ M + GV  + W Y   I+GLCK   + EA+ LF+ +   K   D+  YN LIDGLC
Sbjct: 239 IFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLC 298

Query: 317 KSGRLKIAWEL---FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           K G++  + EL    RS+ + V   D++TYN ++HALC +  +D+A  L  +++
Sbjct: 299 KLGKISTSLELVDEMRSIGKTV---DIITYNSLLHALCKNHHLDQAITLVKEIK 349



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 169/319 (52%), Gaps = 6/319 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E  A    LR      +V  Y+T+I+ LC+      A  L+ EM    G F     PN  
Sbjct: 130 ETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMI-AKGIF-----PNVY 183

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ ++D LCK+    +A  L   M  + + PNVVTY +++ G+C  N  N+A  +F  M
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV+PNV  +N+I+N LCK  ++DEA  L + M    + P+   YN L+DG C  G++
Sbjct: 244 VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKI 303

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + + EL   M S+G   ++ +Y+ L++  CKN  ++ A++L  E+  +GI+P+V  Y TL
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTL 363

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A+ +F E+   G     W Y   I+GLCK G   EA+ L   +     
Sbjct: 364 IDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNAC 423

Query: 302 ELDIRAYNCLIDGLCKSGR 320
             D  +Y  +I  L + G 
Sbjct: 424 IPDAVSYETIIYALSEKGE 442



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/292 (32%), Positives = 154/292 (52%), Gaps = 6/292 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++   G  PNV+T++ L++ LC+      A+NL   M       GV  KPN V
Sbjct: 165 DAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK----GV--KPNVV 218

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I+DG C    V+KA  +F  M  E + PNV  YN +I+G C     +EA  LF EM
Sbjct: 219 TYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM 278

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+VV++N++++ LCK GK+  +  L++ M  IG   +   YN+L+   C    +
Sbjct: 279 HWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHL 338

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  L   ++  G + NV +Y+ LI+G CK+  +E A  ++ E+L++G    V  YN +
Sbjct: 339 DQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVM 398

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
             GL +    + A  L   M+ +    D  +Y T I  L + G  V+  +L 
Sbjct: 399 INGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLL 450



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 148/296 (50%), Gaps = 25/296 (8%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M   A+ MK    G +PNV TY  +++G C       ALN+F  M     E      PN 
Sbjct: 202 MNLLAMMMKK---GVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVE------PNV 252

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  II+GLCK+  VD+A  LF +M  + INP+VVTYN LI G C     + +  L  E
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDE 312

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G   +++++N +++ LCKN  +D+A  L++ +   G++PN   Y TL+DG C  GR
Sbjct: 313 MRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGR 372

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  +F  + + G    V++Y+++ING CK    + AL+L S M      PD V Y T
Sbjct: 373 LEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYET 432

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAA---------------DTW-AYRTFIDGL 280
           +   L E  +  +  KL   M   G++                D W AY +  DG+
Sbjct: 433 IIYALSEKGETVKTNKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWAAYASLEDGM 488



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 154/311 (49%), Gaps = 3/311 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+  L K      A  LF +++   I P++VT   L++ +C+         +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G +PN ++F  ++  +C NG+  EA    + ++  G + +   Y  LM+G C 
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A ++   +       +V  YS +I+  CK K +  A  LYSEM++KGI P+V  
Sbjct: 128 MGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           ++ L   L +  + ++A  L   M + GV  +   Y   +DG C    + +A+ +F  + 
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               E ++  YN +I+GLCK  R+  A  LF+ +    +  DVVTYNI+I  LC  GK+ 
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304

Query: 358 KARDLFLDMEA 368
            + +L  +M +
Sbjct: 305 TSLELVDEMRS 315



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 144/278 (51%), Gaps = 5/278 (1%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P ++ +N ++      N +  A  LF ++   G++P++V+  ++MN  C  G +     +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  ++++G  PN+  + TL+ G CL G+   A      + + G K +  SY+IL+NG CK
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 213 NKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
             E   A+    +ML K  +  DVV+Y+T+   L +   V  A++L+ EM   G+  + +
Sbjct: 128 MGETRAAM----QMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            +   +D LCK+    +A+ L   +     + ++  Y  ++DG C   ++  A  +F  +
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  +  +V  YNI+I+ LC   ++D+A +LF +M  K
Sbjct: 244 VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWK 281



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 115/243 (47%), Gaps = 3/243 (1%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     P ++ FN I+  L K      A  L   +   G++P+      LM+ +C TG 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +     +   +  MG + N  +++ LI G C N +   AL  +  +++ G K D V Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++ +   A ++   +++  V AD   Y T ID LCK  ++ +A  L+  +    
Sbjct: 121 LMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  ++ L+D LCK  + K A  L   + +  +  +VVTY  ++   C   +++KA 
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKAL 237

Query: 361 DLF 363
           ++F
Sbjct: 238 NIF 240



 Score = 96.7 bits (239), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 3/214 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+QI   P    +N ++           A  LF  +E  G K ++ + +IL+N YC    
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I    S+ +++L  G +P+ + + TL  G+    Q   A    D +  HG   D  +Y  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            ++GLCK G    A+++ R   +     D+  Y+ +ID LCK   +  A+ L+  +    
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWV---NADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  +V T++I++ ALC D K  +A +L   M  K
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKK 211


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 203/365 (55%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP++ T+ +L++G C       A +L   M     E      PN V 
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVV 178

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDGLCK G ++ A EL  +M+ + +  +VVTYN+L+ G CY+  W++A  +  +MM
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+VV+F  +++   K G +DEA  L + MIQ  V PN   YN++++G C+ GR+ 
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++ F  M S GC  NV +Y+ LI+G+CK + ++  + L+  M  +G   D+  YNTL 
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  ++ ++  A  +F  M    V  D   +   + GLC NG I  A+  F  +R  +  
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           + I AYN +I GLCK+ +++ AWELF  LP   +  D  TY IMI  LC +G   +A +L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478

Query: 363 FLDME 367
              M+
Sbjct: 479 IRRMK 483



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/331 (36%), Positives = 181/331 (54%), Gaps = 8/331 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A +L + +   G EPNV  YNTLI+GLC+ G   +AL L  EM   G G        + 
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG-------ADV 211

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ GLC  G    A  +   M   +INP+VVT+ +LI  F    + +EA+ L+ E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   V PN V++N I+N LC +G++ +A +  +LM   G  PN   YNTL+ GFC    
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+   +LF  M   G   ++F+Y+ LI+GYC+  ++  AL ++  M+S+ + PD++ +  
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL    ++E A   FD+M+         AY   I GLCK   + +A ELF  L +  
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            + D R Y  +I GLCK+G  + A EL R +
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRM 482



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 165/306 (53%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++T +I   C+   +  A  +  KM      P++VT+ SL+HGFC  N   +A  L I M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PNVV +N +++ LCKNG+++ A  LL  M + G+  +   YNTL+ G C +GR 
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M       +V +++ LI+ + K   ++ A  LY EM+   + P+ V YN++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++  A K FD M   G   +   Y T I G CK   + E ++LF+ +    +
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN LI G C+ G+L++A ++F  +    +  D++T+ I++H LC +G+++ A  
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407

Query: 362 LFLDME 367
            F DM 
Sbjct: 408 KFDDMR 413



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 134/266 (50%)

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           GF ++  + +A  LF EM+     P++V F  ++       + +      + M   G+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   R++ A  +   M  +G + ++ ++  L++G+C    I  A SL 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M+  G +P+VV+YNTL  GL +  ++  A +L +EM++ G+ AD   Y T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G   +A  + R +       D+  +  LID   K G L  A EL++ + +  +  + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
           N +I+ LC  G++  A+  F  M +K
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASK 310



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 76/164 (46%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L  G+  +   E A +L+ EM+     P +V +  L      + + E       +M+ +G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           ++ D +++   I   C+   +  A+ +   +  L YE  I  +  L+ G C   R+  A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L   + +     +VV YN +I  LC +G+++ A +L  +ME K
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/350 (36%), Positives = 196/350 (56%), Gaps = 6/350 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FTY TLINGL + G    AL+L +EM   +       +PN V Y+ +IDGLCK+GFV  A
Sbjct: 161 FTYGTLINGLSKNGQIKAALHLLQEMEKSS------VQPNLVMYSALIDGLCKDGFVSDA 214

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
             L  ++ +  I  + VTYNSLI G C    W E   L  +M+ + V P+  +FN++++ 
Sbjct: 215 LGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDA 274

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LCK G++ EA  +L +M + G +P+   YN LM+G+C    V+ A ELF  M   G + +
Sbjct: 275 LCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPD 334

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V +Y++LI+GYCK K ++ A+ L+ E+ +K + P +  YN+L  GL    ++    KL D
Sbjct: 335 VLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLD 394

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           EM       D   Y   ID LCK G I+EA+ +   +     + +I  YN ++DG C   
Sbjct: 395 EMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRN 454

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +A ++F  + +  L  D++ YN++I+  C    +D+A  LF +M  K
Sbjct: 455 NVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK 504



 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 201/367 (54%), Gaps = 7/367 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +   +   G +P++ TYN L+ G C   +   A  LF  M     E      P+ 
Sbjct: 282 LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLE------PDV 335

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  +IDG CK   VD+A  LF ++ ++N+ P + +YNSLI G C +   +  K L  E
Sbjct: 336 LNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDE 395

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+VV++N++++ LCK G++ EA  +L +M++ GV+PN   YN +MDG+CL   
Sbjct: 396 MHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNN 455

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           VN A+++F  M   G + ++ +Y++LINGYCK + ++ A+ L+ EM  K + PD+  YN+
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNS 515

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL  + ++    +L DEM   G + D   Y   +D  CK     +A+ LFR + +  
Sbjct: 516 LIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQI-VEG 574

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D    + ++D LCK  +LK+A +  + L       +V TY I+I+ALC DG   +A 
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634

Query: 361 DLFLDME 367
            L   ME
Sbjct: 635 LLLSKME 641



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 187/346 (54%), Gaps = 6/346 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  TYN+LI+G C  G       L  +M   N +      P+  T+  +ID LCKEG + 
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVD------PDDYTFNILIDALCKEGRIL 282

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+ +   M      P++VTYN+L+ G+C   + +EA+ LF  M+ +G++P+V+++NV++
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK   +DEA  L + +    + P    YN+L+DG C +GR++  ++L   M      
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +V +Y+ILI+  CK   I  AL +   M+ KG+KP++V YN +  G    + V  A  +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F+ M + G+  D   Y   I+G CK   + EA+ LF+ +R      DI +YN LIDGLC 
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            GR+    EL   +       DV+TYNI++ A C     DKA  LF
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLF 568



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/367 (32%), Positives = 183/367 (49%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF +L+  G  P++ T+  LIN      HT  A +L   +     +      PN VT
Sbjct: 74  AISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQ------PNLVT 127

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + TII+G C  G + KA +    +  +    +  TY +LI+G         A  L  EM 
Sbjct: 128 FNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEME 187

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              VQPN+V ++ +++ LCK+G + +A  L   + + G+  +A  YN+L+DG C  GR  
Sbjct: 188 KSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQ 247

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              +L   M       + ++++ILI+  CK   I  A  + + M  +G KPD+V YN L 
Sbjct: 248 EVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALM 307

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G      V  A +LF+ M + G+  D   Y   IDG CK   + EA+ LF+ L      
Sbjct: 308 EGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLV 367

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             I +YN LIDGLC SGR+    +L   +       DVVTYNI+I ALC +G++ +A  +
Sbjct: 368 PTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGV 427

Query: 363 FLDMEAK 369
            + M  K
Sbjct: 428 LVMMMKK 434



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 165/337 (48%), Gaps = 6/337 (1%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           CR  +   A+  F  M        V   P T  +  ++  + + G    A  LF +++ +
Sbjct: 31  CRFRNVDDAVTCFNRMVR------VFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
            I+P++ T+  LI+ + + +    A  L   ++  G QPN+V+FN I+N  C NG + +A
Sbjct: 85  GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
               + ++  G   + F Y TL++G    G++  A  L   ME    + N+  YS LI+G
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK+  +  AL L S++  +GI  D V YN+L  G   + + +   +L  +M R  V  D
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
            + +   ID LCK G I+EA  +   +     + DI  YN L++G C    +  A ELF 
Sbjct: 265 DYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFN 324

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +  L  DV+ YN++I   C    +D+A  LF ++
Sbjct: 325 RMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 169/342 (49%), Gaps = 17/342 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  + + +   G +PN+ TYN +++G C   +  VA ++F  M     E      P+ 
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE------PDI 475

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  +I+G CK   VD+A  LF +M+ +N+ P++ +YNSLI G C        + L  E
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDE 535

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G  P+V+++N++++  CK    D+A  L   +++ G+ P+ +  + ++D  C   +
Sbjct: 536 MCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEK 594

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  AE+    +   GC  NV +Y+ILIN  CK+     A+ L S+M      PD + +  
Sbjct: 595 LKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEI 654

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVA----ADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +   L + ++ ++A KL +EM   G+     +   ++  F      +G+  ++V  F   
Sbjct: 655 IIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQSHNVFFPA--SSGF--QSVTEF--Y 708

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           R+         +NC  D + +S ++   + +    P G ++ 
Sbjct: 709 RVQASHAGSHRFNCTTDPISRSNQIHHRFTVQPVGPSGPMVT 750



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/267 (27%), Positives = 126/267 (47%)

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
           H  C   + ++A   F  M+     P    F+ ++  + + G    A  L   +   G+ 
Sbjct: 28  HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+   +  L++ +        A  L  ++   G + N+ +++ +ING+C N  I  AL  
Sbjct: 88  PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
              +L++G   D   Y TL  GL +  Q++ A  L  EM++  V  +   Y   IDGLCK
Sbjct: 148 CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCK 207

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +G++ +A+ L   +      LD   YN LIDG C  GR +   +L   + R  +  D  T
Sbjct: 208 DGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYT 267

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           +NI+I ALC +G++ +A+ +   M  +
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKR 294


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  238 bits (606), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 203/365 (55%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP++ T+ +L++G C       A +L   M     E      PN V 
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVV 178

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDGLCK G ++ A EL  +M+ + +  +VVTYN+L+ G CY+  W++A  +  +MM
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+VV+F  +++   K G +DEA  L + MIQ  V PN   YN++++G C+ GR+ 
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++ F  M S GC  NV +Y+ LI+G+CK + ++  + L+  M  +G   D+  YNTL 
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  ++ ++  A  +F  M    V  D   +   + GLC NG I  A+  F  +R  +  
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           + I AYN +I GLCK+ +++ AWELF  LP   +  D  TY IMI  LC +G   +A +L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478

Query: 363 FLDME 367
              M+
Sbjct: 479 IRRMK 483



 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 199/354 (56%), Gaps = 6/354 (1%)

Query: 9    KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
            K+   G  P++ T  +L+NG C+      A++L + M      FG V  PN V Y T+I+
Sbjct: 664  KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG----FGFV--PNVVIYNTVIN 717

Query: 69   GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            GLCK   ++ A E+F  M+ + I  + VTYN+LI G   +  W +A  L  +M+ + + P
Sbjct: 718  GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 777

Query: 129  NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
            NV+ F  +++   K G + EA  L + MI+  V PN F YN+L++GFC+ G +  A+ +F
Sbjct: 778  NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 837

Query: 189  VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
              M S GC  +V +Y+ LI G+CK+K +E  + L+ EM  +G+  D   YNTL  G  + 
Sbjct: 838  DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 897

Query: 249  HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             ++  A K+F+ M   GV+ D   Y   +D LC NG I +A+ +   L+  + ++DI  Y
Sbjct: 898  GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 957

Query: 309  NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            N +I GLC++ +LK AW LFRSL R  +  D + Y  MI  LC  G   +A  L
Sbjct: 958  NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 1011



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/331 (36%), Positives = 181/331 (54%), Gaps = 8/331 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A +L + +   G EPNV  YNTLI+GLC+ G   +AL L  EM   G G        + 
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG-------ADV 211

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ GLC  G    A  +   M   +INP+VVT+ +LI  F    + +EA+ L+ E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   V PN V++N I+N LC +G++ +A +  +LM   G  PN   YNTL+ GFC    
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+   +LF  M   G   ++F+Y+ LI+GYC+  ++  AL ++  M+S+ + PD++ +  
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL    ++E A   FD+M+         AY   I GLCK   + +A ELF  L +  
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            + D R Y  +I GLCK+G  + A EL R +
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRM 482



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 191/364 (52%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ K+   G   +++++  LI+  CR     +AL L  +M     + G   +P+ VT  +
Sbjct: 626 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGS 679

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++G C+     +A  L   M      PNVV YN++I+G C   D N A  +F  M  +G
Sbjct: 680 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 739

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ + V++N +++ L  +G+  +A+RLL  M++  + PN   +  L+D F   G +  A 
Sbjct: 740 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L+  M       NVF+Y+ LING+C +  +  A  ++  M+SKG  PDVV YNTL  G 
Sbjct: 800 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +VE   KLF EM   G+  D + Y T I G C+ G +  A ++F  +       DI
Sbjct: 860 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 919

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN L+D LC +G+++ A  +   L +  +  D++TYNI+I  LC   K+ +A  LF  
Sbjct: 920 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 979

Query: 366 MEAK 369
           +  K
Sbjct: 980 LTRK 983



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/330 (33%), Positives = 174/330 (52%), Gaps = 6/330 (1%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA +L   +  FG  PNV  YNT+INGLC+      AL +F  M           + + V
Sbjct: 692  EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG------IRADAV 745

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY T+I GL   G    A  L   M    I+PNV+ + +LI  F    +  EA+ L+ EM
Sbjct: 746  TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 805

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + + V PNV ++N ++N  C +G + +A  + +LM+  G  P+   YNTL+ GFC + RV
Sbjct: 806  IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 865

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                +LF  M   G   + F+Y+ LI+GYC+  ++  A  +++ M+  G+ PD+V YN L
Sbjct: 866  EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 925

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               L    ++E+A  + +++Q+  +  D   Y   I GLC+   + EA  LFR+L     
Sbjct: 926  LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 985

Query: 302  ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            + D  AY  +I GLC+ G  + A +L R +
Sbjct: 986  KPDAIAYITMISGLCRKGLQREADKLCRRM 1015



 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 165/306 (53%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++T +I   C+   +  A  +  KM      P++VT+ SL+HGFC  N   +A  L I M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PNVV +N +++ LCKNG+++ A  LL  M + G+  +   YNTL+ G C +GR 
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M       +V +++ LI+ + K   ++ A  LY EM+   + P+ V YN++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++  A K FD M   G   +   Y T I G CK   + E ++LF+ +    +
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN LI G C+ G+L++A ++F  +    +  D++T+ I++H LC +G+++ A  
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407

Query: 362 LFLDME 367
            F DM 
Sbjct: 408 KFDDMR 413



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 164/295 (55%), Gaps = 6/295 (2%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  +F  +   G   +  TYNTLI+GL  +G    A  L  +M     +      PN + 
Sbjct: 728  ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID------PNVIF 781

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +T +ID   KEG + +A+ L+ +M   ++ PNV TYNSLI+GFC      +AK +F  M+
Sbjct: 782  FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             +G  P+VV++N ++   CK+ ++++  +L   M   G+  +AF YNTL+ G+C  G++N
Sbjct: 842  SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A+++F  M   G   ++ +Y+IL++  C N +IE AL +  ++    +  D++ YN + 
Sbjct: 902  VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 961

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             GL    +++ A+ LF  + R GV  D  AY T I GLC+ G   EA +L R ++
Sbjct: 962  QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 1016



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 157/306 (51%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V +T ++  + K    D    L+ KM++  I+ ++ ++  LIH FC  +  + A  L
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 661

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P++V+   ++N  C+  +  EA  L++ M   G  PN  +YNT+++G C 
Sbjct: 662 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 721

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              +N A E+F  ME  G + +  +Y+ LI+G   +     A  L  +M+ + I P+V+ 
Sbjct: 722 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 781

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  L     +   +  A  L+ EM R  V  + + Y + I+G C +G + +A  +F  + 
Sbjct: 782 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 841

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN LI G CKS R++   +LF  +    L+ D  TYN +IH  C  GK++
Sbjct: 842 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 901

Query: 358 KARDLF 363
            A+ +F
Sbjct: 902 VAQKVF 907



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 10/294 (3%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +AA L   +     +PNV  +  LI+   + G+ + A NL++EM   +    VV  PN  
Sbjct: 762  DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS----VV--PNVF 815

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY ++I+G C  G +  AK +F  M  +   P+VVTYN+LI GFC +    +   LF EM
Sbjct: 816  TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 875

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              QG+  +  ++N +++  C+ GK++ A ++   M+  GV P+   YN L+D  C  G++
Sbjct: 876  TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 935

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             +A  +   ++      ++ +Y+I+I G C+  +++ A  L+  +  KG+KPD + Y T+
Sbjct: 936  EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 995

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
              GL        A KL   M+  G       Y    D   ++ Y   + EL + 
Sbjct: 996  ISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLSAELIKA 1045



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 6/239 (2%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  L+ ++      PNVFTYN+LING C  G    A  +F+ M +        C P+ 
Sbjct: 796  LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDV 849

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            VTY T+I G CK   V+   +LF +M  + +  +  TYN+LIHG+C A   N A+ +F  
Sbjct: 850  VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 909

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+D GV P++V++N++++ LC NGK+++A  ++E + +  +  +   YN ++ G C T +
Sbjct: 910  MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 969

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A  LF S+   G K +  +Y  +I+G C+      A  L   M   G  P   IY+
Sbjct: 970  LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 1028



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 179/414 (43%), Gaps = 55/414 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF +L V G +P+  TY  +I GLC+ G    A  L   M     E G++C+ N  
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMK----EEGIICQMNAE 494

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV--------VTYNSLIHGFCYAN---- 109
                 D L +    +K   L L+   E    N         + ++S + GF   +    
Sbjct: 495 D-----DHLEEHSSSNKEISLSLREIWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLL 549

Query: 110 ----------------------------------DWNEAKCLFIEMMDQGVQPNVVSFNV 135
                                              +++A  LF EM+     P++V F  
Sbjct: 550 ERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTR 609

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  + K  K D    L   M  +G+  + + +  L+  FC   R++ A  L   M  +G
Sbjct: 610 VLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLG 669

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + ++ +   L+NG+C+    + A+SL   M   G  P+VVIYNT+  GL +   +  A 
Sbjct: 670 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 729

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++F  M++ G+ AD   Y T I GL  +G   +A  L R +   K + ++  +  LID  
Sbjct: 730 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTF 789

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K G L  A  L++ + R  ++ +V TYN +I+  C  G +  A+ +F  M +K
Sbjct: 790 VKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 843



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/266 (27%), Positives = 134/266 (50%)

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           GF ++  + +A  LF EM+     P++V F  ++       + +      + M   G+  
Sbjct: 45  GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           + + +  L+  FC   R++ A  +   M  +G + ++ ++  L++G+C    I  A SL 
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M+  G +P+VV+YNTL  GL +  ++  A +L +EM++ G+ AD   Y T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G   +A  + R +       D+  +  LID   K G L  A EL++ + +  +  + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
           N +I+ LC  G++  A+  F  M +K
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASK 310



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 76/164 (46%)

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L  G+  +   E A +L+ EM+     P +V +  L      + + E       +M+ +G
Sbjct: 42  LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           ++ D +++   I   C+   +  A+ +   +  L YE  I  +  L+ G C   R+  A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L   + +     +VV YN +I  LC +G+++ A +L  +ME K
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  237 bits (605), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 135/354 (38%), Positives = 198/354 (55%), Gaps = 9/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E NV ++N ++NGLC+ G    A ++ E+M      +GV   PN +TY T+IDG CK G 
Sbjct: 152 ELNVISFNIVVNGLCKVGKLNRAGDVIEDMK----VWGV--SPNVITYNTLIDGYCKMGR 205

Query: 76  VDK---AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           + K   A  +  +M  + I PN VTYN LI GFC   + + A  +F EM  QG++PNVV+
Sbjct: 206 IGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVT 265

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N+++N LC +GK+DEA  L + M+   + PN   +N L++GFC    VN A  LF  ME
Sbjct: 266 YNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME 325

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   N  +Y+ LI+ YCK+  +E A +LY+ M+ +GI P+V  YN L  GL     V+
Sbjct: 326 KQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L +EM    ++AD   Y   ID LCK G   +AV+L   +           YN L+
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           DG C+ G L+ A  +   + R    A+VVT+N++I   C  G+++ A  L  +M
Sbjct: 446 DGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEM 499



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/356 (36%), Positives = 190/356 (53%), Gaps = 11/356 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLC---RTGHTIVALNLFEEM-ANGNGEFGVVCKP 58
           A  +   ++V+G  PNV TYNTLI+G C   R G    A  + +EM A G      +C P
Sbjct: 174 AGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG------IC-P 226

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N VTY  +IDG CK+  V  A  +F +M+ + + PNVVTYN LI+G C     +EA  L 
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+   ++PNVV+ NV++N  CKN  ++EA  L   M + GV PNA  Y TL+D +C  
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD 346

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GR+  A  L+  M   G    V +Y+ LI G C+  +++ A SL +EM+SK +  DVV Y
Sbjct: 347 GRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L   L +  +  +A KL DEM   G+      Y T +DG C+ G +  A+ +   +  
Sbjct: 407 NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMER 466

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
              + ++  +N LI G C  GRL+ A  L   +    L+ +  TY I+   +   G
Sbjct: 467 KGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 194/366 (53%), Gaps = 9/366 (2%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F +   +G + ++ + N L++GL +         ++ EM     E       N +++  +
Sbjct: 108 FKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIEL------NVISFNIV 161

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE---AKCLFIEMMD 123
           ++GLCK G +++A ++   MK   ++PNV+TYN+LI G+C      +   A  +  EM+ 
Sbjct: 162 VNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVA 221

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G+ PN V++N++++  CK+  +  A R+   M + G+RPN   YN L++G C  G+V+ 
Sbjct: 222 KGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDE 281

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L   M S   + NV ++++LING+CKNK +  A++L+++M  +G+ P+ + Y TL  
Sbjct: 282 AVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLID 341

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
              +  ++E AF L++ M   G+  +   Y   I GLC+ G +  A  L   +   K   
Sbjct: 342 AYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSA 401

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D+  YN LID LCK G  + A +L   +    L    VTYN ++   C +G +  A  + 
Sbjct: 402 DVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVR 461

Query: 364 LDMEAK 369
             ME K
Sbjct: 462 TRMERK 467



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/288 (36%), Positives = 151/288 (52%), Gaps = 6/288 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+  ++   G  PN  TYN LI+G C+  +   A+ +F EM           +PN V
Sbjct: 211 KADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQG------LRPNVV 264

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLC +G VD+A  L  +M   ++ PNVVT+N LI+GFC     NEA  LF +M
Sbjct: 265 TYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM 324

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QGV PN +++  +++  CK+G+M++A  L  +MI  G+ P    YN L+ G C  G V
Sbjct: 325 EKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDV 384

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M S     +V +Y+ILI+  CK  E   A+ L  EM  KG+ P  V YNTL
Sbjct: 385 KAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
             G      +  A  +   M+R G  A+   +   I G C  G + +A
Sbjct: 445 MDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 168/324 (51%), Gaps = 38/324 (11%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           E F +  D     ++++ N L+ G    ++  + + ++ EM+ + ++ NV+SFN+++N L
Sbjct: 106 EAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGL 165

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR----------------- 183
           CK GK++ A  ++E M   GV PN   YNTL+DG+C  GR+ +                 
Sbjct: 166 CKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGIC 225

Query: 184 ---------------------AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
                                A  +F  M+  G + NV +Y+ILING C + +++ A++L
Sbjct: 226 PNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVAL 285

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             +M+S  ++P+VV +N L  G  +   V  A  LF++M++ GV  +   Y T ID  CK
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +G + +A  L+  +       ++  YNCLI GLC+ G +K A  L   +    L ADVVT
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVT 405

Query: 343 YNIMIHALCADGKMDKARDLFLDM 366
           YNI+I +LC  G+  KA  L  +M
Sbjct: 406 YNILIDSLCKKGESRKAVKLLDEM 429



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 138/237 (58%), Gaps = 6/237 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++     EPNV T+N LING C+      A+NLF +M     + GV   PN +
Sbjct: 281 EAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDME----KQGV--DPNAM 334

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+ID  CK+G ++ A  L+  M D  I P V TYN LI G C   D   A+ L  EM
Sbjct: 335 TYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEM 394

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + +  +VV++N++++ LCK G+  +A +LL+ M + G+ P+   YNTLMDG+C  G +
Sbjct: 395 VSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNL 454

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
             A  +   ME  G + NV ++++LI G+C    +E A  L +EML +G+ P+   Y
Sbjct: 455 RAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTY 511



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 109/203 (53%), Gaps = 11/203 (5%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N+ + + L+  F    ++ R  E F      G K ++ S + L++G  K  E      +Y
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVY 143

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            EM+ + I+ +V+ +N +  GL ++ ++ RA  + ++M+  GV+ +   Y T IDG CK 
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203

Query: 284 GYIVEAVELFRTLRILKYELDIRA-------YNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           G I    ++++   ILK E+  +        YN LIDG CK   +  A  +F  + R  L
Sbjct: 204 GRI---GKMYKADAILK-EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGL 259

Query: 337 IADVVTYNIMIHALCADGKMDKA 359
             +VVTYNI+I+ LC+DGK+D+A
Sbjct: 260 RPNVVTYNILINGLCSDGKVDEA 282


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  237 bits (604), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 206/367 (56%), Gaps = 9/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A++  +   G  P+ +T+N L+N   +         LFEEM N N      C PN +
Sbjct: 107 KALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQN------CSPNVI 160

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +ID +CK G V+KA ++FL MK     PN+ TY S+I G   +   ++A  LF EM
Sbjct: 161 TYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEM 220

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+    V +N +++ L ++G+ D A++L   M+  G++P+   + +L+ G  + GR 
Sbjct: 221 TSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRA 280

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +F     +GC  +V  Y++LI+  CK+K ++ A  ++ E+   G+ PDV  +N L
Sbjct: 281 SEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNAL 340

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++  AF L  +M+R G   D   Y T IDGL K+G + EA +L   ++ L Y
Sbjct: 341 MDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGY 400

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP-RGVLIADVVTYNIMIHALCADGKMDKAR 360
           E D+  YN LID  CK GR++ A  LF  +  +G   A+ VTYN +++ LC  G++D+A 
Sbjct: 401 EPDVVTYNTLIDESCKGGRIEDALRLFEEISAKG--FANTVTYNTILNGLCMAGRVDEAY 458

Query: 361 DLFLDME 367
            LF  M+
Sbjct: 459 KLFNGMK 465



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 191/355 (53%), Gaps = 6/355 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C      YN+LI+   + G+T  AL ++  M    G+ G+  +P+T T+  +++   K  
Sbjct: 85  CALTASAYNSLIDAFVKAGYTQKALAVYRVM----GQSGL--RPDTYTFNVLMNAFKKAK 138

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD   +LF +M+++N +PNV+TY+ LI   C      +A  +F++M  +G +PN+ ++ 
Sbjct: 139 RVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYT 198

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ L K+G +D+A  L E M   G+     VYN+L+ G   +GR + A +LF  M S 
Sbjct: 199 SMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSK 258

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G + +  +++ L+ G         A  ++ E    G   DV +YN L   L +  +++ A
Sbjct: 259 GLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEA 318

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           +++F E++  G+  D + +   +DGLCK+G I +A  L   ++      D+  YN LIDG
Sbjct: 319 WEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDG 378

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L KSGR++ A +L   +       DVVTYN +I   C  G+++ A  LF ++ AK
Sbjct: 379 LRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAK 433



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 158/299 (52%)

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G    G ++K+ E   +M+          YNSLI  F  A    +A  ++  M   G++P
Sbjct: 63  GYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRP 122

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +  +FNV+MN   K  ++D   +L E M      PN   Y+ L+D  C  G V +A ++F
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
           + M+S GC+ N+F+Y+ +I+G  K+  ++ A  L+ EM S+G+    V+YN+L  GL   
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            + + A KLF EM   G+  D   + + + GL   G   EA  +F+  R +   LD+  Y
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           N LID LCKS RL  AWE+F  L    L+ DV T+N ++  LC  G++  A  L  DM+
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMK 361



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/322 (33%), Positives = 171/322 (53%), Gaps = 46/322 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F+ ++  GC PN+FTY ++I+GL ++GH   A  LFEEM +     G+V     V
Sbjct: 177 KALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSE----GLVA--TRV 230

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y ++I GL + G  D A +LF +M  + + P+ VT+ SL++G   A   +EA+ +F E 
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEA 290

Query: 122 MD-----------------------------------QGVQPNVVSFNVIMNELCKNGKM 146
            D                                    G+ P+V +FN +M+ LCK+G++
Sbjct: 291 RDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRI 350

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +A  LL  M + G  P+  VYNTL+DG   +GRV  A +L + M+S+G + +V +Y+ L
Sbjct: 351 HDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL 410

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+  CK   IE AL L+ E+ +KG   + V YNT+  GL    +V+ A+KLF+ M++  V
Sbjct: 411 IDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETV 469

Query: 267 AA----DTWAYRTFIDGLCKNG 284
                 D   Y T ++G  + G
Sbjct: 470 DGVIDPDFVTYTTLLNGARQAG 491



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 106/209 (50%), Gaps = 2/209 (0%)

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           ++P  F+   L  G+   G + ++ E    ME   C     +Y+ LI+ + K    + AL
Sbjct: 52  LQPRIFI--ELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKAL 109

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           ++Y  M   G++PD   +N L     +  +V+  +KLF+EMQ    + +   Y   ID +
Sbjct: 110 AVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAV 169

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G + +A+++F  ++      +I  Y  +IDGL KSG +  A+ LF  +    L+A  
Sbjct: 170 CKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATR 229

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           V YN +IH L   G+ D A  LF +M +K
Sbjct: 230 VVYNSLIHGLGRSGRADAAAKLFREMLSK 258


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  236 bits (603), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 202/365 (55%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +   K+   G EP++ T+ +L+NG CR      AL +F+ M     E G   +PN V 
Sbjct: 135 ALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMV----EMGY--EPNVVI 188

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIIDGLCK   VD A +L  +M+ + I P+ VTYNSLI G C +  W++A  +   M 
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMT 248

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+V +FN +++   K G++ EA  L E MI+  + P+   Y+ L+ G C+  R++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AE++F  M S GC  +V +YSILINGYCK+K++E  + L+ EM  +G+  + V Y  L 
Sbjct: 309 EAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLI 368

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     ++  A ++F  M   GV  +   Y   + GLC NG I +A+ +   ++    +
Sbjct: 369 QGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMD 428

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            DI  YN +I G+CK+G +  AW+L+ SL    L  D+ TY  M+  L   G   +A  L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADAL 488

Query: 363 FLDME 367
           F  M+
Sbjct: 489 FRKMK 493



 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 198/364 (54%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ ++++ G   N+ T N L+N  CR     +AL+   +M     E      P+ VT+ +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHE------PDIVTFGS 156

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++G C+   +  A  +F +M +    PNVV YN++I G C +   + A  L   M   G
Sbjct: 157 LLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDG 216

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++P+ V++N +++ LC +G+ D+A+R++  M +  + P+ F +N L+D     GR++ AE
Sbjct: 217 IRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAE 276

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           EL+  M       ++ +YS+LI G C    ++ A  ++  M+SKG  PDVV Y+ L  G 
Sbjct: 277 ELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGY 336

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +VE   KLF EM + GV  +T  Y   I G C+ G +  A E+F+ +       +I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNI 396

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN L+ GLC +G+++ A  +   + +  + AD+VTYNI+I  +C  G++  A DL+  
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCS 456

Query: 366 MEAK 369
           +  K
Sbjct: 457 LNLK 460



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 181/330 (54%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   G EPNV  YNT+I+GLC++     AL+L   M       G+  +P+ V
Sbjct: 169 DALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVD----GI--RPDAV 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLC  G  D A  +   M    I P+V T+N+LI         +EA+ L+ EM
Sbjct: 223 TYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P++V++++++  LC   ++DEA ++   M+  G  P+   Y+ L++G+C + +V
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKV 342

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M   G   N  +Y++LI GYC+  ++  A  ++  M+  G+ P+++ YN L
Sbjct: 343 EHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVL 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E+A  +  +MQ+ G+ AD   Y   I G+CK G + +A +L+ +L +   
Sbjct: 403 LHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGL 462

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
             DI  Y  ++ GL K G    A  LFR +
Sbjct: 463 TPDIWTYTAMMLGLYKKGLRGEADALFRKM 492



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 137/250 (54%), Gaps = 6/250 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VFT+N LI+   + G    A  L+EEM   + +      P+ VTY+ +I GLC    +
Sbjct: 254 PDVFTFNALIDACVKEGRISEAEELYEEMIRRSLD------PDIVTYSLLIYGLCMYSRL 307

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A+++F  M  +   P+VVTY+ LI+G+C +        LF EM  +GV  N V++ V+
Sbjct: 308 DEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVL 367

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C+ GK++ A  + + M+  GV PN   YN L+ G C  G++ +A  +   M+  G 
Sbjct: 368 IQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGM 427

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +Y+I+I G CK  E+  A  LY  +  KG+ PD+  Y  + +GL++      A  
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADA 487

Query: 257 LFDEMQRHGV 266
           LF +M+  G+
Sbjct: 488 LFRKMKEDGI 497



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 169/345 (48%), Gaps = 35/345 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   ++ ++  + K    D    L+ +M+   I  N+ T N L++ FC  +  + A   
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P++V+F  ++N  C+  ++ +A  + + M+++G  PN  +YNT++DG C 
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYC-------------------------- 211
           + +V+ A +L   ME  G + +  +Y+ LI+G C                          
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 212 ---------KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
                    K   I  A  LY EM+ + + PD+V Y+ L  GL    +++ A ++F  M 
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G   D   Y   I+G CK+  +   ++LF  +       +   Y  LI G C++G+L 
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLN 378

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +A E+F+ +    +  +++TYN+++H LC +GK++KA  +  DM+
Sbjct: 379 VAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQ 423



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 150/294 (51%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D + +LF  M      P++  ++ L+        ++    L+ +M   G+  N+ + N+
Sbjct: 62  LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C+  ++  A   L  M+++G  P+   + +L++GFC   R+  A  +F  M  MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV  Y+ +I+G CK+K+++ AL L + M   GI+PD V YN+L  GL    + + A 
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDAT 241

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++   M +  +  D + +   ID   K G I EA EL+  +     + DI  Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGL 301

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C   RL  A ++F  +       DVVTY+I+I+  C   K++    LF +M  +
Sbjct: 302 CMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 125/233 (53%), Gaps = 6/233 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++     +P++ TY+ LI GLC       A  +F  M +        C P+ V
Sbjct: 274 EAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKG------CFPDVV 327

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+G CK   V+   +LF +M    +  N VTY  LI G+C A   N A+ +F  M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV PN++++NV+++ LC NGK+++A  +L  M + G+  +   YN ++ G C  G V
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
             A +L+ S+   G   ++++Y+ ++ G  K      A +L+ +M   GI P+
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/232 (28%), Positives = 118/232 (50%), Gaps = 4/232 (1%)

Query: 139 ELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           E+ +NG    K+D++  L   M+Q    P+   ++ L+       + +    L+  M+ +
Sbjct: 51  EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G  HN+ + +IL+N +C+  ++  ALS   +M+  G +PD+V + +L  G     ++  A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +FD M   G   +   Y T IDGLCK+  +  A++L   + +     D   YN LI G
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LC SGR   A  +   + +  +  DV T+N +I A   +G++ +A +L+ +M
Sbjct: 231 LCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEM 282



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 77/208 (37%), Gaps = 55/208 (26%)

Query: 207 INGYCKNKEIEGALSLYSEMLSKGI----------------------------------- 231
           I G C ++      S Y EML  GI                                   
Sbjct: 33  ICGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92

Query: 232 ---KPDVVIY-----------------NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
              K DVVIY                 N L        Q+  A     +M + G   D  
Sbjct: 93  KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIV 152

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            + + ++G C+   I +A+ +F  +  + YE ++  YN +IDGLCKS ++  A +L   +
Sbjct: 153 TFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  D VTYN +I  LC  G+ D A
Sbjct: 213 EVDGIRPDAVTYNSLISGLCNSGRWDDA 240


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 199/354 (56%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +N +     +      A+++F +M            P+ V Y  +ID LCK 
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG------LSPDVVNYGALIDALCKL 426

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F +M +E + PN+  +NSL++G C  + W +AK  + EM++QG++P+VV F
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I+  LC  G++ +A RL++LM ++G RP    Y TL+ G CL GR++ A +    M S
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K + ++Y+ L++GYC+   I+ A  ++ EML  GI P VV Y+T+  GLF   +   
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M   G   + W Y   ++GL KN  + EA +LF++L    ++L+I  +N +I 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L KSGR + A  LF ++    L+ DV TY ++   L  +G +++  DLF  ME
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/362 (34%), Positives = 193/362 (53%), Gaps = 3/362 (0%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+V +YNTL+ G C       AL L   MA+  G     C PN V+Y  
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR---SCPPNVVSYAI 208

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G   EG VDKA  LFL+M D  I PNVVTY ++I G C A   + A+ +F +M+D+G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+P+  ++N +++     GK  E  R+LE M   G++P+ + Y +L++  C  GR   A 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF SM   G K NV  Y ILI+GY     +     L + M+  G+ PD  I+N +F   
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A  +F++M++ G++ D   Y   ID LCK G + +AV  F  +       +I
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             +N L+ GLC   + + A E +  +    +  DVV +N ++  LC  G++ KA+ L   
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 366 ME 367
           ME
Sbjct: 509 ME 510



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 194/422 (45%), Gaps = 76/422 (18%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PNV +Y  +ING    G    A NLF EM +         +PN VTYTT+IDGLCK  
Sbjct: 199 CPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRG------IQPNVVTYTTVIDGLCKAQ 252

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE--------------------- 113
            VD+A+ +F +M D+ + P+  TYN LIHG+     W E                     
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312

Query: 114 --------------AKCLFIEMMDQGVQPNVVS--------------------------- 132
                         A+ LF  M+ +G++PNV                             
Sbjct: 313 SLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN 372

Query: 133 --------FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
                   FN+I     K   +DEA  +   M Q G+ P+   Y  L+D  C  GRV+ A
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDA 432

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F  M + G   N+F ++ L+ G C   + E A   Y EML++GI+PDVV +NT+   
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    QV +A +L D M+R G      +Y T I G C  G I EA +    +  +  + D
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              YN L+ G C++GR+  A+ +FR + R  +   VVTY+ ++H L    +  +A++L+L
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 365 DM 366
           +M
Sbjct: 613 NM 614



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 177/379 (46%), Gaps = 14/379 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCR-------TGHTIVALNLFEEMANGNGEFGV 54
           +A  LF  L       +V  +N L+  + R       T  + + ++LF  M     E  +
Sbjct: 32  DALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR---ECTI 88

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
              P+  TY+ +I   C+ G ++     F  +       N +  N L+ G C A    EA
Sbjct: 89  KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148

Query: 115 KCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR---PNAFVYNT 170
             + ++ M + G  P+VVS+N ++   C   + +EA  LL +M     R   PN   Y  
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++GF   G+V++A  LF+ M   G + NV +Y+ +I+G CK + ++ A  ++ +M+ KG
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           +KPD   YN L  G   I + +   ++ +EM  HG+  D + Y + ++ LC NG   EA 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            LF ++     + ++  Y  LI G    G L    +L   +    L  D   +NI+  A 
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 351 CADGKMDKARDLFLDMEAK 369
                +D+A  +F  M+ +
Sbjct: 389 AKKAMIDEAMHIFNKMKQQ 407



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 6/299 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   G  P V +Y TLI G C  G    A    + M        V  KP+ 
Sbjct: 500 MKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVM------LSVGLKPDE 553

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++ G C+ G +D A  +F +M    I P VVTY++++HG      ++EAK L++ 
Sbjct: 554 WTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLN 613

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G Q N+  +N+I+N L KN  +DEA +L + +     +     +N ++     +GR
Sbjct: 614 MITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGR 673

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  LF ++ S G   +VF+Y ++     +   +E    L+S M   G  P+  + N 
Sbjct: 674 NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L   L     + RA     ++     + +       I  L ++ Y   A  L    R+L
Sbjct: 734 LVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 136/362 (37%), Positives = 203/362 (56%), Gaps = 17/362 (4%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  P+V TYNTLI+ LC+ G    A  L  +M++        C PN VTY+ +I+GLCK 
Sbjct: 737  GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS---RVSRCCVPNVVTYSVLINGLCKV 793

Query: 74   GFVDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG---VQP 128
            G +D+A+EL  +M  K  ++ PN++TYNS + G C  +   EA C  +  +  G   V P
Sbjct: 794  GRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEA-CELMRSLRDGSLRVSP 852

Query: 129  NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
            + V+F+ +++ LCK G+ DEA  + + MI  G  PN   YN LM+G C T ++ RA  + 
Sbjct: 853  DTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMI 912

Query: 189  VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             SM   G   +V +YS+L++ +CK   ++ AL L   M S+G  P+VV +N++  GL + 
Sbjct: 913  ESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKS 972

Query: 249  HQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             Q   AF++FD+M  +HG+A D   Y T IDGL + G+  +A  L   +     + D  A
Sbjct: 973  DQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYA 1028

Query: 308  YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            +NC I+GL K G +  A      L    L+ D VT+NI+I   C  G  ++A  LF +M 
Sbjct: 1029 FNCCINGLSKLGDVSRALHRMLELE---LVPDKVTFNILIAGACKAGNFEQASALFEEMV 1085

Query: 368  AK 369
            AK
Sbjct: 1086 AK 1087



 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/370 (36%), Positives = 209/370 (56%), Gaps = 17/370 (4%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF +L   G  P+V TYNTLI+ LC+ G    A  L  +M++ +      C PN VTY+ 
Sbjct: 238 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRS------CVPNVVTYSV 291

Query: 66  IIDGLCKEGFVDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           +I+GLCK G +D+A+EL  +M  K  ++ PN++TYNS + G C  +   EA C  +  + 
Sbjct: 292 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA-CELMRSLR 350

Query: 124 QG---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            G   V P+ V+F+ +++ LCK G++DEA  + + MI  G  PN   YN L++G C   +
Sbjct: 351 DGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADK 410

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + RA  +  SM   G   +V +YS+L++ +CK   ++ AL L   M S+G  P+VV +N+
Sbjct: 411 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 470

Query: 241 LFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +  GL +  +   AF++FD+M  +HG+  D   Y T IDGL + G   +A  L   +   
Sbjct: 471 IIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMP-- 528

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D  A+NC I+GL K G +  A +++  +    L+ D VT+NI+I   C  G  ++A
Sbjct: 529 --DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQA 586

Query: 360 RDLFLDMEAK 369
             LF +M AK
Sbjct: 587 SALFEEMVAK 596



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 200/365 (54%), Gaps = 11/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +    C PNV TY+ LINGLC+ G    A  L +EM   + +      PN +
Sbjct: 269 EARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV----LPNII 324

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TY + +DGLCK+    +A EL   ++D +  ++P+ VT+++LI G C     +EA  +F 
Sbjct: 325 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFD 384

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G  PNV+++N ++N LCK  KM+ A  ++E M+  GV P+   Y+ L+D FC   
Sbjct: 385 DMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 444

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIY 238
           RV+ A EL   M S GC  NV +++ +I+G CK+     A  ++ +M L  G+ PD + Y
Sbjct: 445 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITY 504

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  GLF   +  +A  L D M       DT+A+   I+GL K G +  A++++  +  
Sbjct: 505 CTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVSRALQVYNRMLE 560

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L+   D   +N LI G CK+G  + A  LF  +    L  DV+T+  +I  LC  G+++ 
Sbjct: 561 LELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEA 620

Query: 359 ARDLF 363
           ARD+ 
Sbjct: 621 ARDIL 625



 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/354 (36%), Positives = 195/354 (55%), Gaps = 18/354 (5%)

Query: 15   CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
            C PNV TY+ LINGLC+ G    A  L +EM   + +      PN +TY + +DGLCK+ 
Sbjct: 776  CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDV----LPNIITYNSFLDGLCKQS 831

Query: 75   FVDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
             + +A EL   ++D +  ++P+ VT+++LI G C     +EA  +F +M+  G  PNVV+
Sbjct: 832  MMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVT 891

Query: 133  FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            +NV+MN LCK  KM+ A  ++E M+  GV P+   Y+ L+D FC    V+ A EL   M 
Sbjct: 892  YNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMA 951

Query: 193  SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQV 251
            S GC  NV +++ +I+G CK+ +   A  ++ +M L  G+ PD + Y TL  GLF     
Sbjct: 952  SRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWA 1011

Query: 252  ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYN 309
             +A  L D M       DT+A+   I+GL K G +  A+      R+L+ EL  D   +N
Sbjct: 1012 GQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRALH-----RMLELELVPDKVTFN 1062

Query: 310  CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             LI G CK+G  + A  LF  +    L  DV+T+  +I  LC  G+++   D+ 
Sbjct: 1063 ILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 208/398 (52%), Gaps = 41/398 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC PNV T+N++I+GLC++  +  A  +F++MA  +G       P+ +
Sbjct: 448 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLV-----PDKI 502

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN-------IN---------------------- 92
           TY T+IDGL + G   +A+ L   M D +       IN                      
Sbjct: 503 TYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELE 562

Query: 93  --PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             P+ VT+N LI G C A ++ +A  LF EM+ + +QP+V++F  +++ LCK G+++ A 
Sbjct: 563 LVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAAR 622

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            +L+LM  +GV PN   YN L+ G C +GR+  A +    M S GC  +  +Y  L+   
Sbjct: 623 DILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYAL 682

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+    + AL L SE+ S G  PD V YN L  GL++  Q E+A  + +EM   G   D 
Sbjct: 683 CRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDV 742

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTL--RILKYEL-DIRAYNCLIDGLCKSGRLKIAWEL 327
             Y T ID LCK G + EA  L   +  R+ +  + ++  Y+ LI+GLCK GR+  A EL
Sbjct: 743 VTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEAREL 802

Query: 328 FRSLPRGV--LIADVVTYNIMIHALCADGKMDKARDLF 363
            + + R    ++ +++TYN  +  LC    M +A +L 
Sbjct: 803 IQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELM 840



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 204/404 (50%), Gaps = 44/404 (10%)

Query: 2   EAAALFMKLRVFGCE--PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           EA  L  ++    C+  PN+ TYN+ ++GLC+   T  A  L   + +G+    +   P+
Sbjct: 304 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS----LRVSPD 359

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TVT++T+IDGLCK G +D+A  +F  M      PNV+TYN+L++G C A+    A  +  
Sbjct: 360 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 419

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+D+GV P+V++++V+++  CK  ++DEA  LL  M   G  PN   +N+++DG C   
Sbjct: 420 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLC--- 476

Query: 180 RVNRAEELFVSMESMGCKH-----------------------------------NVFSYS 204
           + +R+ E F   + M  KH                                   + ++++
Sbjct: 477 KSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFN 536

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
             ING  K  ++  AL +Y+ ML   + PD V +N L  G  +    E+A  LF+EM   
Sbjct: 537 CCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 596

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            +  D   +   IDGLCK G +  A ++   +  L    ++  YN L+ GLCKSGR++ A
Sbjct: 597 NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEA 656

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +    +     + D +TY  +++ALC   + D A  L  ++++
Sbjct: 657 CQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 700



 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/376 (32%), Positives = 205/376 (54%), Gaps = 15/376 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ALF ++     +P+V T+  LI+GLC+ G    A ++ + M N     GV   PN V
Sbjct: 585 QASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN----LGV--PPNVV 638

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLCK G +++A +   +M      P+ +TY SL++  C A+  ++A  L  E+
Sbjct: 639 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+ V++N++++ L K+G+ ++A  +LE M+  G  P+   YNTL+D  C  G +
Sbjct: 699 KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758

Query: 182 NRAEELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVV 236
             A  L   M S     C  NV +YS+LING CK   I+ A  L  EM+ K   + P+++
Sbjct: 759 EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII 818

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFIDGLCKNGYIVEAVELF 293
            YN+   GL +   +  A +L   + R G   V+ DT  + T IDGLCK G   EA  +F
Sbjct: 819 TYNSFLDGLCKQSMMAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVF 877

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +    Y  ++  YN L++GLCK+ +++ A  +  S+    +  DV+TY++++ A C  
Sbjct: 878 DDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKA 937

Query: 354 GKMDKARDLFLDMEAK 369
             +D+A +L   M ++
Sbjct: 938 SHVDEALELLHGMASR 953



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/351 (35%), Positives = 190/351 (54%), Gaps = 12/351 (3%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           V  YN ++  LCR G T  AL +F  EMA      GV   P  VTY TII+GLCK   + 
Sbjct: 180 VADYNIVLQSLCRAGETARALEIFRGEMARD----GVA--PTIVTYNTIINGLCKSNELG 233

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
              ELF ++ +   +P+VVTYN+LI   C A D  EA+ L  +M  +   PNVV+++V++
Sbjct: 234 AGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLI 293

Query: 138 NELCKNGKMDEASRLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME--S 193
           N LCK G++DEA  L++ M +    V PN   YN+ +DG C       A EL  S+   S
Sbjct: 294 NGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGS 353

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +    +  ++S LI+G CK  +I+ A S++ +M++ G  P+V+ YN L  GL +  ++ER
Sbjct: 354 LRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMER 413

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + + M   GV  D   Y   +D  CK   + EA+EL   +       ++  +N +ID
Sbjct: 414 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIID 473

Query: 314 GLCKSGRLKIAWELFRSLP-RGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           GLCKS R   A+++F  +  +  L+ D +TY  +I  L   G+  +A  L 
Sbjct: 474 GLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 186/362 (51%), Gaps = 14/362 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +  +F++N  +N L ++G    A++LF             C+PN  TY+T++    K 
Sbjct: 106 GFKHTIFSFNKYLNLLVKSGSPAKAIDLFRS------RLPPRCRPNHFTYSTLLRATYKA 159

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI-EMMDQGVQPNVVS 132
           G  D  + L    +  + + +V  YN ++   C A +   A  +F  EM   GV P +V+
Sbjct: 160 GG-DVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVT 218

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N I+N LCK+ ++     L E +++ G  P+   YNTL+D  C  G +  A  L   M 
Sbjct: 219 YNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 278

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIYNTLFIGLFEIHQ 250
           S  C  NV +YS+LING CK   I+ A  L  EM  K   + P+++ YN+   GL +   
Sbjct: 279 SRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 338

Query: 251 VERAFKLFDEMQRHG---VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
              A +L   + R G   V+ DT  + T IDGLCK G I EA  +F  +    Y  ++  
Sbjct: 339 TAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVIT 397

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN L++GLCK+ +++ A  +  S+    +  DV+TY++++ A C   ++D+A +L   M 
Sbjct: 398 YNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMA 457

Query: 368 AK 369
           ++
Sbjct: 458 SR 459



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 12/180 (6%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  L   +   GC PNV T+N++I+GLC++  +  A  +F++M   +G       P+ +
Sbjct: 942  EALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHG-----LAPDKI 996

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY T+IDGL + G+  +A+ L   M D    P+   +N  I+G     D + A      M
Sbjct: 997  TYCTLIDGLFRTGWAGQAEVLLDAMPD----PDTYAFNCCINGLSKLGDVSRA---LHRM 1049

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++  + P+ V+FN+++   CK G  ++AS L E M+   ++P+   +  L+DG C  G+V
Sbjct: 1050 LELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/357 (36%), Positives = 197/357 (55%), Gaps = 7/357 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E +V+TYN+LI+GLC+ G    A+ +   M + +      C+PNTVTY T+I  LCKE
Sbjct: 332 GFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRD------CEPNTVTYNTLIGTLCKE 385

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V+ A EL   +  + + P+V T+NSLI G C  ++   A  LF EM ++G  P+  ++
Sbjct: 386 NHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTY 445

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++++  LC   ++ EA  LL+ M   G   N  VYNTL+DG C   RV  AE++F  ME 
Sbjct: 446 SILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEM 505

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   +  +Y+ LING CK+K +E A  L  +M+ +G+KPD   Y T+     +   ++R
Sbjct: 506 LGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKR 565

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M  +G   D   Y T I GLCK G +  A +L R++++    L  +AYN +I 
Sbjct: 566 AADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQ 625

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
            LCK  R K A  LFR +       DV+TY I+   LC   G + +A D  ++M  K
Sbjct: 626 ALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEK 682



 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/391 (33%), Positives = 196/391 (50%), Gaps = 43/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GCE    + N L+NGLC+ G    AL    E      E G    P+ VT+  +++GLC+ 
Sbjct: 264 GCELTSVSVNVLVNGLCKEGRIEEALRFIYE------EEGFC--PDQVTFNALVNGLCRT 315

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +  E+   M ++    +V TYNSLI G C   + +EA  +   M+ +  +PN V++
Sbjct: 316 GHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTY 375

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LCK   ++ A+ L  ++   GV P+   +N+L+ G CLT     A ELF  M+ 
Sbjct: 376 NTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKE 435

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  + F+YSILI   C  + ++ AL L  EM   G   +VV+YNTL  GL + ++V  
Sbjct: 436 KGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGD 495

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL-------------FRTLRILK 300
           A  +FD+M+  GV+  +  Y T I+GLCK+  + EA +L             F    +LK
Sbjct: 496 AEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLK 555

Query: 301 Y----------------------ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           Y                      E DI  Y  LI GLCK+GR+ +A +L RS+    ++ 
Sbjct: 556 YFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVL 615

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               YN +I ALC   +  +A  LF +M  K
Sbjct: 616 TPQAYNPVIQALCKRKRTKEAMRLFREMMEK 646



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 184/362 (50%), Gaps = 8/362 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  K+      P+V T+N LI  LC+      A+ + E+M N    +G+  +P+  T+T
Sbjct: 185 TLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPN----YGL--RPDEKTFT 238

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++ G  +E  V+ A  +   M +       V+ N L++G C      EA     E  ++
Sbjct: 239 TLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EE 296

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+ V+FN ++N LC+ G + +   +++ M++ G   + + YN+L+ G C  G ++ A
Sbjct: 297 GFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEA 356

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            E+   M S  C+ N  +Y+ LI   CK   +E A  L   + SKG+ PDV  +N+L  G
Sbjct: 357 VEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQG 416

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L      E A +LF+EM+  G   D + Y   I+ LC    + EA+ L + + +     +
Sbjct: 417 LCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARN 476

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  YN LIDGLCK+ R+  A ++F  +    +    VTYN +I+ LC   ++++A  L  
Sbjct: 477 VVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMD 536

Query: 365 DM 366
            M
Sbjct: 537 QM 538



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 147/280 (52%), Gaps = 7/280 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +++  GC+P+ FTY+ LI  LC       AL L +EM          C  N V 
Sbjct: 426 AMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSG------CARNVVV 479

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDGLCK   V  A+++F +M+   ++ + VTYN+LI+G C +    EA  L  +M+
Sbjct: 480 YNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMI 539

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P+  ++  ++   C+ G +  A+ +++ M   G  P+   Y TL+ G C  GRV+
Sbjct: 540 MEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVD 599

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L  S++  G      +Y+ +I   CK K  + A+ L+ EM+ KG  PDV+ Y  +F
Sbjct: 600 VASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVF 659

Query: 243 IGLFE-IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            GL      ++ A     EM   G+  +  ++    +GLC
Sbjct: 660 RGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLC 699



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 155/311 (49%), Gaps = 2/311 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           KP+T  Y   +  L K   +   + L  KM  + + P+V T+N LI   C A+    A  
Sbjct: 161 KPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAIL 220

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +M + G++P+  +F  +M    +   ++ A R+ ELM++ G    +   N L++G C
Sbjct: 221 MLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLC 280

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  A   F+  E   C   V +++ L+NG C+   I+  L +   ML KG + DV 
Sbjct: 281 KEGRIEEALR-FIYEEEGFCPDQV-TFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVY 338

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN+L  GL ++ +++ A ++   M       +T  Y T I  LCK  ++  A EL R L
Sbjct: 339 TYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVL 398

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+  +N LI GLC +   +IA ELF  +       D  TY+I+I +LC++ ++
Sbjct: 399 TSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRL 458

Query: 357 DKARDLFLDME 367
            +A  L  +ME
Sbjct: 459 KEALMLLKEME 469



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 165/359 (45%), Gaps = 12/359 (3%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           +   P+VF  + L+  L R G     L L  +M +           +  T+   ++    
Sbjct: 88  YSAHPSVF--HELLRQLARAGSFDSMLTLLRQMHSSK------IPVDESTFLIFLETYAT 139

Query: 73  EGFVD-KAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
              +  +   LFL M +D  + P+   YN  +     AN     + L  +M+   V P+V
Sbjct: 140 SHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDV 199

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            +FN+++  LCK  ++  A  +LE M   G+RP+   + TLM GF     V  A  +   
Sbjct: 200 STFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKEL 259

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M   GC+    S ++L+NG CK   IE AL    E   +G  PD V +N L  GL     
Sbjct: 260 MVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYE--EEGFCPDQVTFNALVNGLCRTGH 317

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           +++  ++ D M   G   D + Y + I GLCK G I EAVE+   +     E +   YN 
Sbjct: 318 IKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNT 377

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI  LCK   ++ A EL R L    ++ DV T+N +I  LC     + A +LF +M+ K
Sbjct: 378 LIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEK 436



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 144/296 (48%), Gaps = 15/296 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ + GC  NV  YNTLI+GLC+      A ++F++M       GV    ++V
Sbjct: 460 EALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEM----LGV--SRSSV 513

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GLCK   V++A +L  +M  E + P+  TY +++  FC   D   A  +   M
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++V++  ++  LCK G++D AS+LL  +   G+      YN ++   C   R 
Sbjct: 574 TLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRT 633

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             A  LF  M   G   +V +Y I+  G C     I+ A+    EML KGI P+   +  
Sbjct: 634 KEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGF 693

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFI------DGLCKNGYIVE 288
           L  GL  +   +   +L + +   G    ++T   R F+      D L   G I++
Sbjct: 694 LAEGLCSLSMEDTLIQLINMVMEKGRFSQSETSIIRGFLKIQKFNDALANLGAILD 749


>gi|356497996|ref|XP_003517841.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 600

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 130/358 (36%), Positives = 202/358 (56%), Gaps = 6/358 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L+  G E + +T   + NGLC+ GH+  AL+  ++M   N      C  +   Y+ ++DG
Sbjct: 179 LKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKN------CNLDVTAYSGVVDG 232

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK+G V +A  LF +M  + I P++ TYN LIHG C  + W EA  L   MM +G+ P+
Sbjct: 233 LCKDGMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPD 292

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V +FNVI     K G +  A  +   M+ +G+  +   Y +++   C+  ++  A E+F 
Sbjct: 293 VQTFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFD 352

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M S GC  N+ +Y+ LI+G+C+ K +  A+    EM++ G+ P+VV ++TL  G+ +  
Sbjct: 353 LMISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAG 412

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +   A +LF  M +HG   +       +DGL K  +  EA+ LFR L  + ++L+I  YN
Sbjct: 413 KPVAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYN 472

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            ++DG+C SG+L  A ELF  L    +  DVVTYNIMI  LC +G +D A DL + ME
Sbjct: 473 IILDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKME 530



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 176/364 (48%), Gaps = 7/364 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G +P++FTYN LI+GLC       A  L   M       G++  P+  
Sbjct: 241 EALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRK----GIM--PDVQ 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  I     K G + +AK +F  M    I  +VVTY S+I   C  N   +A  +F  M
Sbjct: 295 TFNVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PN+V++  +++  C+   M++A   L  M+  G+ PN   ++TL+ G C  G+ 
Sbjct: 355 ISKGCLPNIVTYTSLIHGWCETKNMNKAMYFLGEMVNNGLDPNVVTWSTLIGGVCKAGKP 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ELF+ M   G   N+ + +I+++G  K      A+SL+ E+       +++IYN +
Sbjct: 415 VAAKELFLVMHKHGQLPNLQTCAIILDGLFKCNFHSEAMSLFRELEKMNWDLNIIIYNII 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    ++  A +LF  +   GV  D   Y   I GLCK G + +A +L   +     
Sbjct: 475 LDGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMIKGLCKEGLLDDAEDLLMKMEENGC 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN  + GL +  ++  + +    +      AD  T   +I+   A+ K ++A +
Sbjct: 535 PPNECTYNVFVQGLLRRYQISKSTKYLMFMKDKGFQADATTTKFLINYFSAN-KENRALE 593

Query: 362 LFLD 365
           +FL 
Sbjct: 594 VFLQ 597



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 148/326 (45%), Gaps = 15/326 (4%)

Query: 34  HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
           H +V +  F  + + N  F +V K     YTT I              L   M    + P
Sbjct: 72  HKMVTMKPFPCVKDFNLLFSIVAKMKH--YTTAI-------------SLIKHMSYIGVKP 116

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
            V T N +I+  C  +       +   M   GV+P++V+FN I+N LC  G + +A R +
Sbjct: 117 TVHTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFV 176

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + +  +G   +++    + +G C  G  + A      ME   C  +V +YS +++G CK+
Sbjct: 177 DHLKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKD 236

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +  AL+L+S+M  KGI+PD+  YN L  GL    + + A  L   M R G+  D   +
Sbjct: 237 GMVFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF 296

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
                   K G I  A  +F  +  +  E D+  Y  +I   C   ++K A E+F  +  
Sbjct: 297 NVIAGRFFKTGMISRAKSIFSFMVHMGIEHDVVTYTSIIGAHCMLNQMKDAMEVFDLMIS 356

Query: 334 GVLIADVVTYNIMIHALCADGKMDKA 359
              + ++VTY  +IH  C    M+KA
Sbjct: 357 KGCLPNIVTYTSLIHGWCETKNMNKA 382



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 1/229 (0%)

Query: 142 KNGK-MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           +N K +D A      M+ +   P    +N L            A  L   M  +G K  V
Sbjct: 59  RNAKSVDVALDFYHKMVTMKPFPCVKDFNLLFSIVAKMKHYTTAISLIKHMSYIGVKPTV 118

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            + +I+IN  C+        S+   M   G++P +V +NT+  GL     V +A +  D 
Sbjct: 119 HTLNIVINCLCRLSHAVFGFSVLGLMFKIGVEPSIVTFNTIVNGLCVEGNVAQAIRFVDH 178

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           ++  G  +D++      +GLCK G+   A+   + +      LD+ AY+ ++DGLCK G 
Sbjct: 179 LKDMGYESDSYTCGAITNGLCKVGHSSAALSYLKKMEEKNCNLDVTAYSGVVDGLCKDGM 238

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  A  LF  +    +  D+ TYN +IH LC   +  +A  L  +M  K
Sbjct: 239 VFEALNLFSQMTGKGIQPDLFTYNCLIHGLCNFDRWKEAAPLLANMMRK 287


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/357 (36%), Positives = 194/357 (54%), Gaps = 7/357 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P++FTYN+LI GLC+ G    A+ +  +M   +        PNTVTY T+I  LCKE
Sbjct: 346 GFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRD------FSPNTVTYNTLISTLCKE 399

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++A EL   +  + I P+V T+NSLI G C  N+   A  LF EM  +G  P+  ++
Sbjct: 400 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTY 459

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC  G+++EA  LL+ M   G   N   YNTL+DGFC   R+  AEE+F  ME 
Sbjct: 460 NMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMEL 519

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV +Y+ LI+G CKN+ +E A  L  +ML +G+KPD   YN+L         +++
Sbjct: 520 QGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKK 579

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M  +G   D+  Y T I GL K G +  A  L RT+++    L  + YN +I 
Sbjct: 580 AADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIK 639

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA-DGKMDKARDLFLDMEAK 369
            L +  R   A  LFR +       D VTY ++   LC+  G + +A D  ++M  K
Sbjct: 640 ALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDK 696



 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/356 (37%), Positives = 195/356 (54%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ FT+N+L+NGLCR GH   AL + + M     +      P+  TY ++I GLCK 
Sbjct: 311 GFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFD------PDIFTYNSLIFGLCKL 364

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A E+  +M   + +PN VTYN+LI   C  N   EA  L   +  +G+ P+V +F
Sbjct: 365 GEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 424

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LC       A  L E M   G  P+ F YN L+D  C  GR+  A  L   MES
Sbjct: 425 NSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMES 484

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  NV +Y+ LI+G+CKNK IE A  ++ EM  +GI  +VV YNTL  GL +  +VE 
Sbjct: 485 SGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEE 544

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L D+M   G+  D + Y + +   C+ G I +A ++ +T+     E D   Y  LI 
Sbjct: 545 AAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLIL 604

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL K+GR+++A  L R++    ++    TYN +I AL  + +  +A  LF +M  K
Sbjct: 605 GLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEK 660



 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 196/356 (55%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  +  T N L++G C+ G     L+  +EM+N         +P+  T+ ++++GLC+ 
Sbjct: 276 GCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEG------FRPDRFTFNSLVNGLCRI 329

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A E+   M  E  +P++ TYNSLI G C   +  EA  +  +M+ +   PN V++
Sbjct: 330 GHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTY 389

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK  +++EA+ L  ++   G+ P+   +N+L+ G CLT     A ELF  M++
Sbjct: 390 NTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKT 449

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  + F+Y++LI+  C    +E ALSL  EM S G   +VV YNTL  G  +  ++E 
Sbjct: 450 KGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEE 509

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++FDEM+  G++ +   Y T IDGLCKN  + EA +L   + +   + D   YN L+ 
Sbjct: 510 AEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLT 569

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             C++G +K A ++ +++       D VTY  +I  L   G+++ A  L   ++ K
Sbjct: 570 YFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLK 625



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/353 (33%), Positives = 187/353 (52%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V T+N LI  LCR      A+ + EEM    G +G+   P+  T+TT++ G  +E
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEM----GSYGL--SPDEKTFTTLMQGFIEE 259

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++ A  +  +M       + VT N L+HG+C      E      EM ++G +P+  +F
Sbjct: 260 GNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTF 319

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LC+ G +  A  +L++M+Q G  P+ F YN+L+ G C  G V  A E+   M  
Sbjct: 320 NSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMIL 379

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                N  +Y+ LI+  CK  ++E A  L   + SKGI PDV  +N+L  GL   +    
Sbjct: 380 RDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRL 439

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LF+EM+  G   D + Y   ID LC  G + EA+ L + +       ++  YN LID
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLID 499

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G CK+ R++ A E+F  +    +  +VVTYN +I  LC + ++++A  L   M
Sbjct: 500 GFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQM 552



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 169/316 (53%), Gaps = 7/316 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   L   G  P+V T+N+LI GLC T +  +A+ LFEEM          C P+  
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKG------CHPDEF 457

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC  G +++A  L  +M+    + NVVTYN+LI GFC      EA+ +F EM
Sbjct: 458 TYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEM 517

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  NVV++N +++ LCKN +++EA++L++ M+  G++P+ F YN+L+  FC  G +
Sbjct: 518 ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDI 577

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M S GC+ +  +Y  LI G  K   +E A  L   +  KG+      YN +
Sbjct: 578 KKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPV 637

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF   +   A +LF EM   G   D   Y+    GLC   G I EAV+    +    
Sbjct: 638 IKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKG 697

Query: 301 YELDIRAYNCLIDGLC 316
           +  D  ++  L +GLC
Sbjct: 698 FLPDFSSFLMLAEGLC 713



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 182/355 (51%), Gaps = 6/355 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FG + + FTYN L+N L   G+ +  + +        G      KP+  T+  +I  LC+
Sbjct: 170 FGLKLDAFTYNFLLNVLV-DGNKLKLVEIVNSRMVSRG-----IKPDVTTFNILIKALCR 223

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +  A  +  +M    ++P+  T+ +L+ GF    + N A  +  +M+  G   + V+
Sbjct: 224 AHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVT 283

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            NV+++  CK G+++E    ++ M   G RP+ F +N+L++G C  G V  A E+   M 
Sbjct: 284 VNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVML 343

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++F+Y+ LI G CK  E+E A+ + ++M+ +   P+ V YNTL   L + +QVE
Sbjct: 344 QEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVE 403

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L   +   G+  D   + + I GLC       A+ELF  ++      D   YN LI
Sbjct: 404 EATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLI 463

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           D LC  GRL+ A  L + +       +VVTYN +I   C + ++++A ++F +ME
Sbjct: 464 DSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEME 518



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 179/366 (48%), Gaps = 11/366 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRT---GHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           +  +++  GCE    T+  LI    +       +  +++ EE      EFG+  K +  T
Sbjct: 127 VLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEE------EFGL--KLDAFT 178

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +++ L     +   + +  +M    I P+V T+N LI   C A+    A  +  EM 
Sbjct: 179 YNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMG 238

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  +F  +M    + G M+ A R+ E M+  G   +    N L+ G+C  GR+ 
Sbjct: 239 SYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIE 298

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
                   M + G + + F+++ L+NG C+   ++ AL +   ML +G  PD+  YN+L 
Sbjct: 299 EVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI 358

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL ++ +VE A ++ ++M     + +T  Y T I  LCK   + EA EL R L      
Sbjct: 359 FGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGIL 418

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  +N LI GLC +   ++A ELF  +       D  TYN++I +LC+ G++++A  L
Sbjct: 419 PDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSL 478

Query: 363 FLDMEA 368
             +ME+
Sbjct: 479 LKEMES 484



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 177/354 (50%), Gaps = 7/354 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   Y  ++  L + G       + +EM +        C+    T+  +I+   K    
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTG------CEIRRGTFLILIESYAKFELF 156

Query: 77  DKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           D+A  +   M++E  +  +  TYN L++     N     + +   M+ +G++P+V +FN+
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC+  ++  A  ++E M   G+ P+   + TLM GF   G +N A  +   M + G
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAG 276

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  +  + ++L++GYCK   IE  LS   EM ++G +PD   +N+L  GL  I  V+ A 
Sbjct: 277 CPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHAL 336

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++ D M + G   D + Y + I GLCK G + EAVE+   + +  +  +   YN LI  L
Sbjct: 337 EILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTL 396

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK  +++ A EL R L    ++ DV T+N +I  LC       A +LF +M+ K
Sbjct: 397 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 150/333 (45%), Gaps = 50/333 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +++  GC P+ FTYN LI+ LC  G    AL+L +EM +        C  N VT
Sbjct: 440 AMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG------CSRNVVT 493

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG CK   +++A+E+F +M+ + I+ NVVTYN+LI G C      EA  L  +M+
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV- 181
            +G++P+  ++N ++   C+ G + +A+ +++ M   G  P++  Y TL+ G    GRV 
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVE 613

Query: 182 ----------------------------------NRAEELFVSMESMGCKHNVFSYSILI 207
                                             + A  LF  M   G   +  +Y ++ 
Sbjct: 614 LASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673

Query: 208 NGYCKNK-EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            G C     I  A+    EM  KG  PD   +  L  GL  +   +   KL + + +   
Sbjct: 674 RGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQAN 733

Query: 267 AADT--------WAYRTFIDGLCKNGYIVEAVE 291
            +D+           R F D L   G I+ + E
Sbjct: 734 FSDSEVSMIMGFLKIRKFQDALATLGRILSSRE 766


>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 452

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 215/377 (57%), Gaps = 27/377 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N  +Y TLI+GLC+ G T  A+ +   +       G++ +PN V Y+TII  LCK+
Sbjct: 79  GFQLNQVSYGTLIDGLCKAGETRAAMQVLRNID------GLLVQPNVVMYSTIIYSLCKD 132

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V  A +L+ +M  + I+P+V+TYN+L++G        EA  LF +M+ + ++P++ +F
Sbjct: 133 KLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIYTF 192

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LCK G+M +A  +L +MI+  V P+   YN+LMDG+ L  + N+A  +F +M  
Sbjct: 193 NILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTMAR 252

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V SYS++ING CK K ++ A++L  EM SK + P+ V Y++L  GL +  ++  
Sbjct: 253 RGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGRIFD 312

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A+ L +EM   G  AD   Y + +D LCKN  + +A+ L   ++    + DI  Y  L+D
Sbjct: 313 AWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTILVD 372

Query: 314 GLCKSGRLKIAWELFR----------SLPRGVL-----------IADVVTYNIMIHALCA 352
           GLCK+GRLK A E+++          SL    L             + VT+ I+I AL  
Sbjct: 373 GLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRALFE 432

Query: 353 DGKMDKARDLFLDMEAK 369
           +   DKA +L  +M A+
Sbjct: 433 NDMNDKAVELLREMIAR 449



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 155/322 (48%), Gaps = 62/322 (19%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L+ ++ +    P+V TYNTL+ G    G    A+ LF +M   N       KP+ 
Sbjct: 136 IDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKN------IKPDI 189

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  ++DGLCKEG + KA+ +   M  ++++P+V+TYNSL+ G+      N+A  +F  
Sbjct: 190 YTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNT 249

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +GV P+V S++V++N LCK   +DEA  LL+ M    + PN   Y++L+DG   +GR
Sbjct: 250 MARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLHKSGR 309

Query: 181 -----------------------------------VNRAEELFVSMESMGCKHNVFSYSI 205
                                              V++A  L   ++  G + ++++Y+I
Sbjct: 310 IFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIYTYTI 369

Query: 206 LINGYCKNKEI---------------------EGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           L++G CKN  +                     + ALSL S+M   G  P+ V +  L   
Sbjct: 370 LVDGLCKNGRLKDAQEVYQILLIKGYHLDSLFDKALSLLSKMEDNGCTPNPVTFEILIRA 429

Query: 245 LFEIHQVERAFKLFDEMQRHGV 266
           LFE    ++A +L  EM   G+
Sbjct: 430 LFENDMNDKAVELLREMIARGL 451



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 146/286 (51%), Gaps = 6/286 (2%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN------ELCKN 143
           N  P +  +  +       N ++    L  +M  +G+Q ++V+ N+++N      ++C N
Sbjct: 3   NPTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVNCFCHLGQVCLN 62

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
            K+ E     + +I  G + N   Y TL+DG C  G    A ++  +++ +  + NV  Y
Sbjct: 63  DKVKETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMY 122

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +I   CK+K +  A  LYS+ML K I PDV+ YNTL  G   + +++ A  LF++M  
Sbjct: 123 STIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLL 182

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
             +  D + +   +DGLCK G + +A  +   +     + D+  YN L+DG     +   
Sbjct: 183 KNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENK 242

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A  +F ++ R  +  DV +Y++MI+ LC    +D+A +L  +M +K
Sbjct: 243 ATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSK 288


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/334 (41%), Positives = 195/334 (58%), Gaps = 7/334 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y TLINGLC+ G T  A+ L  +M  G    GV  +PN + Y  ++DGLCKEG V +A  
Sbjct: 164 YGTLINGLCKMGKTRDAIELLRKMEKG----GV--RPNLIMYNMVVDGLCKEGLVTEACG 217

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM-MDQGVQPNVVSFNVIMNEL 140
           L  +M  + I  +V TYNSLIHGFC A  +  A  L  EM M + V+P+V +FN++++ L
Sbjct: 218 LCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDAL 277

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G + EA  +  LMI+ G+ P+    N LM+G+CL G ++ A+E+F  M   G   NV
Sbjct: 278 CKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNV 337

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            SYS LINGYCK K ++ AL L +EM  + + PD V YN L  GL +  +V   + L + 
Sbjct: 338 ISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEA 397

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G A D   Y   +D   K   + +A+ LF+ +       +IR YN LIDGLCK GR
Sbjct: 398 MRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGR 457

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           +K A E+F+ L       ++ TYNIMI+ L  +G
Sbjct: 458 MKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 189/360 (52%), Gaps = 9/360 (2%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R FG +P  FT  TL+ GLC  G T  ALNL++   +    F  VC      Y T+I+GL
Sbjct: 120 RGFGVDP--FTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVC------YGTLINGL 171

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           CK G    A EL  KM+   + PN++ YN ++ G C      EA  L  EM+ +G+  +V
Sbjct: 172 CKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDV 231

Query: 131 VSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            ++N +++  C  G+   A RLL E++++  VRP+ + +N L+D  C  G V  A  +F 
Sbjct: 232 FTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFG 291

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   G + +V S + L+NG+C    +  A  ++  M+ +G  P+V+ Y+TL  G  ++ 
Sbjct: 292 LMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVK 351

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            V+ A +L  EM +  +  DT  Y   +DGL K+G ++   +L   +R      D+  YN
Sbjct: 352 MVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYN 411

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L+D   K   L  A  LF+ +    +  ++ TYNI+I  LC  G+M  A+++F  +  K
Sbjct: 412 VLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVK 471



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 180/398 (45%), Gaps = 41/398 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++      P++ + N L++ + +T H    ++L   + +         KP+ V
Sbjct: 38  DAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTP-----KPSLV 92

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T +  I+ L   G +  A  +  K+       +  T  +L+ G C      EA  L+   
Sbjct: 93  TLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHA 152

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   + V +  ++N LCK GK  +A  LL  M + GVRPN  +YN ++DG C  G V
Sbjct: 153 VSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLV 212

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
             A  L   M   G   +VF+Y+ LI+G+C   + +GA+ L +EM+ K  ++PDV  +N 
Sbjct: 213 TEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNI 272

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT---------W-------------------- 271
           L   L ++  V  A  +F  M + G+  D          W                    
Sbjct: 273 LVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERG 332

Query: 272 ------AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
                 +Y T I+G CK   + EA+ L   +       D   YNCL+DGL KSGR+   W
Sbjct: 333 KLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEW 392

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +L  ++       D++TYN+++        +DKA  LF
Sbjct: 393 DLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALF 430



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/250 (32%), Positives = 135/250 (54%), Gaps = 14/250 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G EP+V + N L+NG C  G    A  +F+ M    G+      PN +
Sbjct: 285 EARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVE-RGKL-----PNVI 338

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN----DWNEAKCL 117
           +Y+T+I+G CK   VD+A  L  +M   N+ P+ VTYN L+ G   +     +W+    L
Sbjct: 339 SYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWD----L 394

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   G  P+++++NV++++  K   +D+A  L + ++  G+ PN   YN L+DG C 
Sbjct: 395 VEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCK 454

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR+  A+E+F  +   GC+ N+ +Y+I+ING  +   ++ A +L  EM+  G  P+ V 
Sbjct: 455 GGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVT 514

Query: 238 YNTLFIGLFE 247
           ++ L   L E
Sbjct: 515 FDPLVRALLE 524



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 1/231 (0%)

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC-KH 198
           L K    D+A      M+ +   P+    N L+     T        L   ++S G  K 
Sbjct: 30  LPKTPTFDDAVSTFHRMLHLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKP 89

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++ + SI IN      ++  A S+ ++++ +G   D     TL  GL    +   A  L+
Sbjct: 90  SLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLY 149

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           D     G + D   Y T I+GLCK G   +A+EL R +       ++  YN ++DGLCK 
Sbjct: 150 DHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKE 209

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G +  A  L   +    +  DV TYN +IH  C  G+   A  L  +M  K
Sbjct: 210 GLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMK 260


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/354 (34%), Positives = 200/354 (56%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +N +     +      A+++F +M            P+ V +  +ID LCK 
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG------LSPDVVNFGALIDALCKL 426

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A   F +M +E + PN+  +NSL++G C  + W +AK  + EM++QG++P+VV F
Sbjct: 427 GRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFF 486

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I+  LC  G++ +A RL++LM ++G RP+   Y TL+ G CL GR++ A +    M S
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K + ++Y+ L++GYC+   I+ A  ++ EML  GI P VV Y+T+  GLF   +   
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  M   G   + W Y   ++GL KN  + EA +LF++L    ++L+I  +N +I 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L KSGR + A  LF ++    L+ DV TY ++   L  +G +++  DLF  ME
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAME 720



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/362 (34%), Positives = 193/362 (53%), Gaps = 3/362 (0%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+V +YNTL+ G C       AL L   MA+  G     C PN V+Y T
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGR---SCPPNVVSYAT 208

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G   EG VDKA  LFL+M D  I PNVVTY ++I G C A   + A+ +F +M+D+G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+P+  ++N +++     GK  E  R+LE M   G++P+ + Y +L++  C  GR   A 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F SM   G K NV  Y ILI+GY     +     L + M+  G+ PD  I+N +F   
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A  +F++M++ G++ D   +   ID LCK G + +AV  F  +       +I
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNI 448

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             +N L+ GLC   + + A E +  +    +  DVV +N ++  LC  G++ KA+ L   
Sbjct: 449 FVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDL 508

Query: 366 ME 367
           ME
Sbjct: 509 ME 510



 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 199/422 (47%), Gaps = 76/422 (18%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PNV +Y T+ING    G    A NLF EM +         +PN VTYTT+IDGLCK  
Sbjct: 199 CPPNVVSYATVINGFFTEGQVDKAYNLFLEMMDRG------IQPNVVTYTTVIDGLCKAQ 252

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN---------------------- 112
            VD+A+ +F +M D+ + P+  TYN LIHG+     W                       
Sbjct: 253 VVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYG 312

Query: 113 -------------EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
                        EA+  F  M+ +G++PNV  + ++++     G + E   LL LM++ 
Sbjct: 313 SLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVEN 372

Query: 160 GVRPNAFVYN-----------------------------------TLMDGFCLTGRVNRA 184
           G+ P+  ++N                                    L+D  C  GRV+ A
Sbjct: 373 GLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDA 432

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F  M + G   N+F ++ L+ G C   + E A   Y EML++GI+PDVV +NT+   
Sbjct: 433 VLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCN 492

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    QV +A +L D M+R G   D  +Y T I G C  G I EA +    +  +  + D
Sbjct: 493 LCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPD 552

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              YN L+ G C++GR+  A+ +FR + R  +   VVTY+ ++H L    +  +A++L+L
Sbjct: 553 EWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYL 612

Query: 365 DM 366
           +M
Sbjct: 613 NM 614



 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 187/396 (47%), Gaps = 41/396 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K++  G  P+V  +  LI+ LC+ G    A+  F +M N     GV   PN  
Sbjct: 396 EAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE----GVA--PNIF 449

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + +++ GLC     +KAKE + +M ++ I P+VV +N+++   C      +A+ L   M
Sbjct: 450 VFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLM 509

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+V+S+  ++   C  G++DEA++ L++M+ +G++P+ + YNTL+ G+C  GR+
Sbjct: 510 ERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRI 569

Query: 182 N-----------------------------------RAEELFVSMESMGCKHNVFSYSIL 206
           +                                    A+EL+++M + G + N++ Y+I+
Sbjct: 570 DDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNII 629

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG  KN  ++ A  L+  + SK  + ++  +N +   LF+  + E A  LF  +  +G+
Sbjct: 630 LNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGL 689

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D + Y    + L + GY+ E  +LF  +       + R  N L+  L   G +  A  
Sbjct: 690 VPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGA 749

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
               L       +  T  ++I  L  D     A  L
Sbjct: 750 YLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/379 (27%), Positives = 177/379 (46%), Gaps = 14/379 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCR-------TGHTIVALNLFEEMANGNGEFGV 54
           +A  LF  L       ++  +N L+  + R       T  + + ++LF  M     E  +
Sbjct: 32  DALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIR---ECTI 88

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
              P+  TY+ +I   C+ G ++     F  +       N +  N L+ G C A    EA
Sbjct: 89  KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148

Query: 115 KCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR---PNAFVYNT 170
             + I+ M + G  P+VVS+N ++   C   + +EA  LL +M     R   PN   Y T
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++GF   G+V++A  LF+ M   G + NV +Y+ +I+G CK + ++ A  ++ +M+ KG
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           +KPD   YN L  G   I + +   ++ +EM  HG+  D + Y + ++ LC NG   EA 
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
             F ++     + ++  Y  LI G    G L    +L   +    L  D   +NI+  A 
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 351 CADGKMDKARDLFLDMEAK 369
                +D+A  +F  M+ +
Sbjct: 389 AKKAMIDEAMHIFNKMKQQ 407



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 6/299 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   G  P+V +Y TLI G C  G    A    + M        V  KP+ 
Sbjct: 500 MKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVM------LSVGLKPDE 553

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++ G C+ G +D A  +F +M    I P VVTY++++HG      ++EAK L++ 
Sbjct: 554 WTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLN 613

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G Q N+  +N+I+N L KN  +DEA +L + +     +     +N ++     +GR
Sbjct: 614 MITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGR 673

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  LF ++ S G   +VF+Y ++     +   +E    L+S M   G  P+  + N 
Sbjct: 674 NEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNA 733

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L   L     + RA     ++     + +       I  L ++ Y   A  L    R+L
Sbjct: 734 LVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPEKYRVL 792


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 205/365 (56%), Gaps = 9/365 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+  FG EP+V T ++LING C+      A++L  +M        + CK + V 
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE------MRCKLDVVI 176

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIIDG CK G V+ A  LF +M+ + +  + VTYNSL+ G C +   ++A  L  +M+
Sbjct: 177 YNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMV 236

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + PNV++F  ++N   + GK  EA +  E MI+  + P+ F YN+++ G C+ G+V+
Sbjct: 237 MRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVD 296

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+++   M + GC  +V +Y+ LING+CK K ++    L  EM  +G+  D V +NT+ 
Sbjct: 297 EAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTII 356

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+  + + A ++F  M   G   +   Y   + GLC N  + +A+ LF +++  + E
Sbjct: 357 QGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEME 413

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LDI  YN +I G+C  G ++ AW+LF SL    L  DVVTY  MI   C     DKA  L
Sbjct: 414 LDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFL 473

Query: 363 FLDME 367
           +  M+
Sbjct: 474 YRKMQ 478



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 200/365 (54%), Gaps = 9/365 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF  + + G   +++TYN +IN LCR    ++AL++  +M     +FG   +P+ VT +
Sbjct: 90  SLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVS 143

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++I+G C+   V  A +L  KM++     +VV YN++I GFC     N A  LF  M   
Sbjct: 144 SLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERD 203

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+ + V++N ++  LC +G+  +A+RL+  M+   + PN   +  L++ F   G+   A
Sbjct: 204 GVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEA 263

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           ++ +  M       +VF+Y+ +I+G C + +++ A  +   M++KG  PDVV YNTL  G
Sbjct: 264 KKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLING 323

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  +V+   KL  EM + G+  DT  + T I G  + G    A E+F  +       +
Sbjct: 324 FCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPN 380

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           IR Y+ L+ GLC + R++ A  LF S+ +  +  D+ TYNI+IH +C  G ++ A DLF 
Sbjct: 381 IRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFC 440

Query: 365 DMEAK 369
            +  K
Sbjct: 441 SLSFK 445



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 160/312 (51%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V ++ ++  + K    D    LF  M+   I  ++ TYN +I+  C  + +  A  +
Sbjct: 67  PSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSV 126

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P+VV+ + ++N  C+  ++  A  L+  M ++  + +  +YNT++DGFC 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCK 186

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           TG VN A  LF  ME  G + +  +Y+ L+ G C +     A  L  +M+ + I P+V+ 
Sbjct: 187 TGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT 246

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  L        +   A K ++EM R  +  D + Y + I GLC +G + EA ++   + 
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN LI+G CK+ R+    +L R + +  L+ D VT+N +I      G+ D
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366

Query: 358 KARDLFLDMEAK 369
            A+++F  M ++
Sbjct: 367 AAQEIFSRMGSR 378



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 148/299 (49%), Gaps = 44/299 (14%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G   +  TYN+L+ GLC +G    A  L  +M   +        PN +T
Sbjct: 193 ALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRD------IVPNVIT 246

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T +I+   +EG   +AK+ + +M    I+P+V TYNS+IHG C     +EAK +   M+
Sbjct: 247 FTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMV 306

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+VV++N ++N  CK  ++DE ++L+  M Q G+  +   +NT++ G+   GR +
Sbjct: 307 TKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPD 366

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-------------- 228
            A+E+F     MG + N+ +YSIL+ G C N  +E AL L+  M                
Sbjct: 367 AAQEIF---SRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVI 423

Query: 229 ---------------------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                KG++PDVV Y T+  G       ++A  L+ +MQ  G+
Sbjct: 424 HGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGL 482



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 147/294 (50%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A +LF  M      P++V ++ L+     + +++    LF  M   G+  ++ ++N+
Sbjct: 50  LDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNI 109

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC+  +   A  ++  M++ G  P+    ++L++GFC   RV  A +L   ME M 
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           CK +V  Y+ +I+G+CK   +  AL L+  M   G++ D V YN+L  GL    +   A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M    +  +   +   I+   + G  +EA + +  +     + D+  YN +I GL
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C  G++  A ++   +       DVVTYN +I+  C   ++D+   L  +M  +
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR 343



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 128/233 (54%), Gaps = 9/233 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   + ++     +P+VFTYN++I+GLC  G    A  + + M          C P+ 
Sbjct: 261 LEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKG------CFPDV 314

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+G CK   VD+  +L  +M    +  + VT+N++I G+  A   + A+ +F  
Sbjct: 315 VTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSR 374

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G +PN+ ++++++  LC N ++++A  L E M +  +  +   YN ++ G C+ G 
Sbjct: 375 M---GSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGN 431

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           V  A +LF S+   G + +V +Y+ +I+G+C+ +  + A  LY +M   G+ P
Sbjct: 432 VEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 204/368 (55%), Gaps = 11/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVA---LNLFEEMANGNGEFGVVCKP 58
           EA  +   +R  GC PN  TYNTL+   CR G    A   ++L  E  N         KP
Sbjct: 28  EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--------KP 79

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N VT+ ++++GLCK G ++ A+++F +M  E + P+VV+YN+L+ G+C     +E+  +F
Sbjct: 80  NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 139

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  +G+ P+VV+F  +++  CK G +++A  L+  M + G+R N   +  L+DGFC  
Sbjct: 140 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 199

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++ A      M   G + +V  Y+ LINGYCK   ++ A  L  EM +K +KPDVV Y
Sbjct: 200 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 259

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +T+  G  ++  ++ AF+L  +M + GV  D   Y + I GLC+   + +A ELF  +  
Sbjct: 260 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 319

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L  + D   Y  LIDG CK G ++ A  L   + R  ++ DVVTY+++I+ L    +  +
Sbjct: 320 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 379

Query: 359 ARDLFLDM 366
           A  L   +
Sbjct: 380 AHRLLFKL 387



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 188/354 (53%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV+TYN L+  LC  G    A+ +  +M       G  C PN VTY T++   C+ 
Sbjct: 5   GVAPNVYTYNILVRALCARGRLEEAVGVVGDMR------GAGCAPNAVTYNTLVAAFCRA 58

Query: 74  GFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G +D A+ +   M++E N  PN+VT+NS+++G C A     A+ +F EM+ +G+ P+VVS
Sbjct: 59  GELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++  CK G + E+  +   M Q G+ P+   + +L+   C  G + +A  L   M 
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + N  +++ LI+G+CK   ++ AL    EM   GI+P VV YN L  G  ++ +++
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 238

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L  EM+   V  D   Y T I G CK G +  A +L + +       D   Y+ LI
Sbjct: 239 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 298

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GLC+  RL  A ELF ++ +  +  D  TY  +I   C +G ++KA  L  +M
Sbjct: 299 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 207/380 (54%), Gaps = 21/380 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+ A+F ++   G  P+V T+ +LI+  C+ G+   A+ L  +M     E G+  + N V
Sbjct: 134 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR----ERGL--RMNEV 187

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDG CK+GF+D A     +M+   I P+VV YN+LI+G+C     + A+ L  EM
Sbjct: 188 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 247

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V+P+VV+++ I++  CK G +D A +L + M++ GV P+A  Y++L+ G C   R+
Sbjct: 248 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 307

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ELF +M  +G + + F+Y+ LI+G+CK   +E ALSL+ EM+ KG+ PDVV Y+ L
Sbjct: 308 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 367

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR---------------TFIDGLCKNGYI 286
             GL +  + + A +L  ++       D   Y                  + G C  G +
Sbjct: 368 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 427

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA ++++++    ++LD   Y+ LI G C+ G ++ A    + + R     +  +   +
Sbjct: 428 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 487

Query: 347 IHALCADGKMDKARDLFLDM 366
           +  L  +G + +A +   D+
Sbjct: 488 VRGLFEEGMVVEADNAIQDL 507



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 152/285 (53%), Gaps = 1/285 (0%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M    + PNV TYN L+   C      EA  +  +M   G  PN V++N ++   C+ G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 146 MDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           +D A R++ LM + G  +PN   +N++++G C  GR+  A ++F  M   G   +V SY+
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            L++GYCK   +  +L+++SEM  +G+ PDVV + +L     +   +E+A  L  +M+  
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+  +   +   IDG CK G++ +A+     +R    +  +  YN LI+G CK GR+ +A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            EL R +    +  DVVTY+ +I   C  G +D A  L   M  K
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKK 285



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 178/386 (46%), Gaps = 56/386 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++R  G   N  T+  LI+G C+ G    AL   EEM     + G+  +P+ V
Sbjct: 169 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR----KCGI--QPSVV 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I+G CK G +D A+EL  +M+ + + P+VVTY+++I G+C   + + A  L  +M
Sbjct: 223 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 282

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV P+ ++++ ++  LC+  ++++A  L E M+Q+GV+P+ F Y TL+DG C  G V
Sbjct: 283 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 342

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGY------------------------------- 210
            +A  L   M   G   +V +YS+LING                                
Sbjct: 343 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 402

Query: 211 ---CKNKEIEGALSL----------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              C   E +  ++L                Y  ML +  K D  +Y+ L  G      V
Sbjct: 403 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 462

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            +A     +M R G + ++ +  + + GL + G +VEA    + L       D  A   L
Sbjct: 463 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 522

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLI 337
           ID   K G +    ++   + R  L+
Sbjct: 523 IDLNRKEGNVDALIDVLCGMARDGLL 548


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/361 (36%), Positives = 200/361 (55%), Gaps = 19/361 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F  +R  G  PN++TYNT+++G C+  H   AL L++EM  G+G       PN V
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEML-GDGLL-----PNVV 299

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +IDGLCK   +  A++  + M    + PN+  YN LI G+C A + +EA  L  E+
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+V ++++++  LC   +M+EA  LL+ M + G  PNA  YNTL+DG+C  G +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E+   M   G + N+ ++S LI+GYCK  ++E A+ LY+EM+ KG+ PDVV Y  L
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTAL 479

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF------RT 295
             G F+    + AF+L  EMQ  G+  + +     IDGLCK+G I +A++LF       T
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDT 539

Query: 296 LRILKYELDIR-------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
                 ELD          Y  LI GLC  GR+  A + F  +    L  DV T  ++I 
Sbjct: 540 TGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQ 599

Query: 349 A 349
            
Sbjct: 600 G 600



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/351 (37%), Positives = 189/351 (53%), Gaps = 6/351 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV TY TLI+G CR G  + A  LF+EM            P  V YT +I GLC E
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK------IFPTVVIYTILIRGLCGE 241

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A+ +F  M++  + PN+ TYN+++ G+C      +A  L+ EM+  G+ PNVV+F
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++++ LCK  +M  A + L  M   GV PN FVYN L+DG+C  G ++ A  L   +E 
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +VF+YSILI G C    +E A  L  EM  KG  P+ V YNTL  G  +   +E+
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++  +M   G+  +   + T IDG CK G +  A+ L+  + I     D+ AY  LID
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           G  K G  K A+ L + +    L  +V T + +I  LC DG++  A  LFL
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 192/366 (52%), Gaps = 9/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  ++ K+ V    P +   N +++GL + G       ++ +M            PN V
Sbjct: 144 EALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGAS------PNVV 194

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG C++G   KA  LF +M ++ I P VV Y  LI G C  +  +EA+ +F  M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN+ ++N +M+  CK   + +A  L + M+  G+ PN   +  L+DG C T  +
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +  + M S G   N+F Y+ LI+GYCK   +  ALSL+SE+    I PDV  Y+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + ++E A  L  EM++ G   +   Y T IDG CK G + +A+E+   +     
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E +I  ++ LIDG CK+G+++ A  L+  +    L+ DVV Y  +I     DG   +A  
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 362 LFLDME 367
           L  +M+
Sbjct: 495 LHKEMQ 500



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 163/312 (52%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P       ++DGL K+G  D   +++  M     +PNVVTY +LI G C   D+ +A  L
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM+++ + P VV + +++  LC   ++ EA  +   M   G+ PN + YNT+MDG+C 
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              V +A EL+  M   G   NV ++ ILI+G CK  E+  A     +M S G+ P++ +
Sbjct: 276 IAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G  +   +  A  L  E+++H +  D + Y   I GLC    + EA  L + ++
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              +  +   YN LIDG CK G ++ A E+   +    +  +++T++ +I   C  GKM+
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 358 KARDLFLDMEAK 369
            A  L+ +M  K
Sbjct: 456 AAMGLYTEMVIK 467



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 163/333 (48%), Gaps = 42/333 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE---------------- 44
           + A    + +  FG  PN+F YN LI+G C+ G+   AL+L  E                
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 45  ---------MANGNGEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                    M   +G    + K    PN VTY T+IDG CKEG ++KA E+  +M ++ I
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            PN++T+++LI G+C A     A  L+ EM+ +G+ P+VV++  +++   K+G   EA R
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS-------------MESMGCKH 198
           L + M + G+ PN F  + L+DG C  GR++ A +LF++             ++   C  
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N   Y+ LI G C +  I  A   +S+M   G++PDV     +  G F    +     L 
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQ 614

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            ++ + G+  ++  YR    G  ++GY+  A+ 
Sbjct: 615 ADILKMGIIPNSSVYRVLAKGYEESGYLKSALR 647



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 5/312 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN   +  +I    + G V++A  ++ KM   ++ P +   N ++ G      ++    +
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + +M+ +G  PNVV++  +++  C+ G   +A RL + MI+  + P   +Y  L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R++ AE +F +M + G   N+++Y+ +++GYCK   ++ AL LY EML  G+ P+VV 
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  L  GL +  ++  A K   +M   GV  + + Y   IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D+  Y+ LI GLC   R++ A  L + + +   + + VTYN +I   C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 358 KARDLFLDMEAK 369
           KA ++   M  K
Sbjct: 421 KAIEVCSQMTEK 432



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 146/281 (51%), Gaps = 23/281 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +++  G  PN  TYNTLI+G C+ G+   A+ +  +M     E G+  +PN +
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT----EKGI--EPNII 439

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++T+IDG CK G ++ A  L+ +M  + + P+VV Y +LI G     +  EA  L  EM
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV---------------RPNAF 166
            + G+ PNV + + +++ LCK+G++ +A +L   + + G                 PN  
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHV 557

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +Y  L+ G C  GR+ +A + F  M   G + +VF+  ++I G+ +   +   + L +++
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADI 617

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           L  GI P+  +Y  L  G  E   ++ A +  +++   G+ 
Sbjct: 618 LKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIGIG 658


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 201/393 (51%), Gaps = 28/393 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  LF   R   C P+  TY+TLING C+      A  L +EM                
Sbjct: 150 EAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTII 209

Query: 47  -----NGNGEFGVV--------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                NG  +  +V        C P+ +TYT ++D LCK   +  A  +   M +    P
Sbjct: 210 KGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAP 269

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           NVVTYN+LI+GFC   + +EA  LF +M++    P+V ++N++++  CK  +  + ++LL
Sbjct: 270 NVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLL 329

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M++ G  PN   YNTLMD    +G+   A  L   M    CK + F+++++I+ +CK 
Sbjct: 330 QEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKV 389

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +++ A  L+  M  +G  PD+  YN +  G    ++++ A +L + M   G   D   Y
Sbjct: 390 GQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 449

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            + + GLCK   + EA E++  LR   Y LD+   + LIDGLCKS RL  A +L R + R
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                DVV Y I+IH  C   ++DK+   F +M
Sbjct: 510 NGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542



 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 131/368 (35%), Positives = 200/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           + A L  ++  +GCEPN  TYNTL++ L ++G  I A NL + M   +      CKP+  
Sbjct: 324 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD------CKPSHF 377

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID  CK G +D A ELF  M D    P++ TYN +I G C AN  ++A+ L   M
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P+VV++N I++ LCK  ++DEA  + E++   G   +    +TL+DG C + R+
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + AE+L   ME  G   +V +Y+ILI+G+CK  +++ +L+ +SEML KG  P V+ Y+ +
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V     L   M   GV  D   Y + IDGLCK+    EA EL++ ++    
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGC 617

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  YN L+D LCK  RL  A  L   +     + D VTYN +        + DKA  
Sbjct: 618 APTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFR 677

Query: 362 LFLDMEAK 369
           LF  M+++
Sbjct: 678 LFQAMKSR 685



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 191/342 (55%), Gaps = 6/342 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  L++ LC++     A  + E+M          C PN VTY T+I+G CK G
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAG------CAPNVVTYNTLINGFCKLG 285

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A  LF +M + + +P+V TYN LI G+C      +   L  EM+  G +PN +++N
Sbjct: 286 NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 345

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +M+ L K+GK  +A  L ++M++   +P+ F +N ++D FC  G+++ A ELF  M   
Sbjct: 346 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 405

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++++Y+I+I+G C+   I+ A  L   M   G  PDVV YN++  GL +  QV+ A
Sbjct: 406 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 465

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           +++++ ++  G   D     T IDGLCK+  + +A +L R +       D+ AY  LI G
Sbjct: 466 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 525

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            CK+ +L  +   F  +     +  V+TY+I+I  LC   ++
Sbjct: 526 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 567



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 173/292 (59%), Gaps = 6/292 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GC P+V TYN++++GLC+      A  ++E + NG G F      + V
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNG-GYFL-----DVV 482

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T +T+IDGLCK   +D A++L  +M+     P+VV Y  LIHGFC A+  +++   F EM
Sbjct: 483 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P V+++++++++LCK+ ++ +   LL+ M++ GV P+A VY +++DG C +   
Sbjct: 543 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSY 602

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL+  M+  GC   V +Y++L++  CK   ++ A+ L   M S G  PD V YN++
Sbjct: 603 DEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSV 662

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           F G ++  + ++AF+LF  M+  G +   + Y   +  L     + +A+E++
Sbjct: 663 FDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIW 714



 Score =  174 bits (440), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 168/341 (49%), Gaps = 34/341 (9%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           K +  T   ++    ++    +A +LF   +    +P+ +TY++LI+GFC A D+ +A  
Sbjct: 129 KHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYR 188

Query: 117 LFIEMMDQGV----------------------------------QPNVVSFNVIMNELCK 142
           L  EM  +G+                                   P+V+++ ++++ LCK
Sbjct: 189 LLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRNCAPSVITYTILVDALCK 248

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
           + ++ +AS +LE MI+ G  PN   YNTL++GFC  G ++ A  LF  M    C  +VF+
Sbjct: 249 SARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFT 308

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ILI+GYCK +  +    L  EM+  G +P+ + YNTL   L +  +   AF L   M 
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 368

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           R       + +   ID  CK G +  A ELF+ +       DI  YN +I G C++ R+ 
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 428

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            A +L   +       DVVTYN ++  LC   ++D+A +++
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVY 469



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 125/240 (52%), Gaps = 6/240 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  P+V  Y  LI+G C+      +L  F EM +        C P  +
Sbjct: 499 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKG------CVPTVI 552

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +ID LCK   V     L   M +  + P+ + Y S+I G C ++ ++EA  L+  M
Sbjct: 553 TYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLM 612

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P VV++NV++++LCK  ++DEA  LLE+M   G  P+   YN++ DGF  +   
Sbjct: 613 KQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEH 672

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  LF +M+S GC    F YS+L+      ++++ A+ ++ E L  G   D  I  TL
Sbjct: 673 DKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 1/209 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G + + F  N L+  F    +   A +LF +     C  +  +YS LING+CK ++ +
Sbjct: 125 QPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQ 184

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  EM  +GI P   +YNT+  GL +  +V+ A   + +MQR+  A     Y   +
Sbjct: 185 QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILV 243

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           D LCK+  I +A  +   +       ++  YN LI+G CK G +  A  LF  +      
Sbjct: 244 DALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCS 303

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
            DV TYNI+I   C   +      L  +M
Sbjct: 304 PDVFTYNILIDGYCKQERPQDGAKLLQEM 332


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 204/368 (55%), Gaps = 11/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVA---LNLFEEMANGNGEFGVVCKP 58
           EA  +   +R  GC PN  TYNTL+   CR G    A   ++L  E  N         KP
Sbjct: 170 EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--------KP 221

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N VT+ ++++GLCK G ++ A+++F +M  E + P+VV+YN+L+ G+C     +E+  +F
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 281

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  +G+ P+VV+F  +++  CK G +++A  L+  M + G+R N   +  L+DGFC  
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++ A      M   G + +V  Y+ LINGYCK   ++ A  L  EM +K +KPDVV Y
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +T+  G  ++  ++ AF+L  +M + GV  D   Y + I GLC+   + +A ELF  +  
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L  + D   Y  LIDG CK G ++ A  L   + R  ++ DVVTY+++I+ L    +  +
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 359 ARDLFLDM 366
           A  L   +
Sbjct: 522 AHRLLFKL 529



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 188/354 (53%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV+TYN L+  LC  G    A+ +  +M       G  C PN VTY T++   C+ 
Sbjct: 147 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMR------GAGCAPNAVTYNTLVAAFCRA 200

Query: 74  GFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G +D A+ +   M++E N  PN+VT+NS+++G C A     A+ +F EM+ +G+ P+VVS
Sbjct: 201 GELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 260

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++  CK G + E+  +   M Q G+ P+   + +L+   C  G + +A  L   M 
Sbjct: 261 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 320

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + N  +++ LI+G+CK   ++ AL    EM   GI+P VV YN L  G  ++ +++
Sbjct: 321 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L  EM+   V  D   Y T I G CK G +  A +L + +       D   Y+ LI
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GLC+  RL  A ELF ++ +  +  D  TY  +I   C +G ++KA  L  +M
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 207/380 (54%), Gaps = 21/380 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+ A+F ++   G  P+V T+ +LI+  C+ G+   A+ L  +M     E G+  + N V
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR----ERGL--RMNEV 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDG CK+GF+D A     +M+   I P+VV YN+LI+G+C     + A+ L  EM
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V+P+VV+++ I++  CK G +D A +L + M++ GV P+A  Y++L+ G C   R+
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ELF +M  +G + + F+Y+ LI+G+CK   +E ALSL+ EM+ KG+ PDVV Y+ L
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR---------------TFIDGLCKNGYI 286
             GL +  + + A +L  ++       D   Y                  + G C  G +
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA ++++++    ++LD   Y+ LI G C+ G ++ A    + + R     +  +   +
Sbjct: 570 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 629

Query: 347 IHALCADGKMDKARDLFLDM 366
           +  L  +G + +A +   D+
Sbjct: 630 VRGLFEEGMVVEADNAIQDL 649



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 162/313 (51%), Gaps = 2/313 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   Y  ++  L  +  +  A+     M    + PNV TYN L+   C      EA  +
Sbjct: 116 PSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFC 176
             +M   G  PN V++N ++   C+ G++D A R++ LM + G  +PN   +N++++G C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  A ++F  M   G   +V SY+ L++GYCK   +  +L+++SEM  +G+ PDVV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + +L     +   +E+A  L  +M+  G+  +   +   IDG CK G++ +A+     +
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R    +  +  YN LI+G CK GR+ +A EL R +    +  DVVTY+ +I   C  G +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 357 DKARDLFLDMEAK 369
           D A  L   M  K
Sbjct: 415 DSAFQLNQKMLKK 427



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 169/362 (46%), Gaps = 56/362 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++R  G   N  T+  LI+G C+ G    AL   EEM     + G+  +P+ V
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR----KCGI--QPSVV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I+G CK G +D A+EL  +M+ + + P+VVTY+++I G+C   + + A  L  +M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV P+ ++++ ++  LC+  ++++A  L E M+Q+GV+P+ F Y TL+DG C  G V
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGY------------------------------- 210
            +A  L   M   G   +V +YS+LING                                
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544

Query: 211 ---CKNKEIEGALSL----------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              C   E +  ++L                Y  ML +  K D  +Y+ L  G      V
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 604

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            +A     +M R G + ++ +  + + GL + G +VEA    + L       D  A   L
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 664

Query: 312 ID 313
           ID
Sbjct: 665 ID 666


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/374 (34%), Positives = 201/374 (53%), Gaps = 16/374 (4%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA----NGNGEFGV-----------VC 56
           V G  PN FTY  L+ GLC+ G +      FE+M       +  + +           VC
Sbjct: 410 VEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVC 469

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P  VTY T++ GL K G V  A  L   M +  ++P+V+T+NS++ G C      +A  
Sbjct: 470 RPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHN 529

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F   +++G +PNVV+++ +++ L K  KMDEA +LL  M+++G R N   Y+T++DG  
Sbjct: 530 VFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLL 589

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  A  +   M   GC  +  +Y+ LI+G+ K + +  A+ L  EML  G  P VV
Sbjct: 590 KVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVV 649

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y TL  GL    + + A ++ D M   G A +   Y + +DGLCK G + EA+  F  +
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709

Query: 297 -RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
            R       + AY+ LIDGLCK+GR+  A+E    + R   I DVVT++I+I+ LC  G+
Sbjct: 710 ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 769

Query: 356 MDKARDLFLDMEAK 369
           +D   +LF  M  +
Sbjct: 770 IDTGLELFCGMAER 783



 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 194/396 (48%), Gaps = 40/396 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++R  GC P+  TYNTLI+G  +      A+ L  EM     E G    P+ V
Sbjct: 596 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML----EAGF--HPSVV 649

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+  GLC+ G  D+A E+   M      PN +TY+S++ G C A    EA   F +M
Sbjct: 650 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 709

Query: 122 M-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             D+ V P+V++++ +++ LCK G++DEA   LE MI+ G  P+   ++ L++G C  GR
Sbjct: 710 ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 769

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI--- 237
           ++   ELF  M   GCK ++++Y+ +IN YC   E   A +L  EM + GI  + V    
Sbjct: 770 IDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGI 829

Query: 238 ------------------------------YNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                                         YNTL   L    + E+A +L   M   G +
Sbjct: 830 VIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGS 889

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   Y T +DGL K G    A +L + +R   +  D+R Y  +I GL K+ +L +A + 
Sbjct: 890 PDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDY 949

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           F  + R  L  D + Y+ +I A C   K+D A  L 
Sbjct: 950 FEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL 985



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/370 (34%), Positives = 192/370 (51%), Gaps = 11/370 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  +F +    GC PNV TY+TLI+GL +      AL L  +M     E G  C+ NT
Sbjct: 525 LDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV----ELG--CRANT 578

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T++DGL K G ++ A  +  +M+D    P+ VTYN+LI GF       EA  L  E
Sbjct: 579 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G  P+VV++  + + LC++G+ DEA  +L+ M   G  PNA  Y++++DG C  GR
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698

Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           V  A   F  M  + +   H V +YS LI+G CK   I+ A      M+  G  PDVV +
Sbjct: 699 VTEALGYFEKMARDEVVAPH-VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTF 757

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           + L  GL +  +++   +LF  M   G  AD +AY   I+  C  G    A  L   ++ 
Sbjct: 758 SILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKT 817

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                +   +  +I  LC + R+  A   F S+P      D ++YN +I +L A  + ++
Sbjct: 818 HGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDC--RDEISYNTLITSLVASRRSEQ 875

Query: 359 ARDLFLDMEA 368
           A +L   M A
Sbjct: 876 ALELLRAMVA 885



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 194/402 (48%), Gaps = 43/402 (10%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  L  ++   G  P+V TY TL +GLCR+G    A+ + + MA         C PN +
Sbjct: 631  EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG------CAPNAI 684

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY++I+DGLCK G V +A   F KM +DE + P+V+ Y++LI G C A   +EA      
Sbjct: 685  TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLER 744

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+  G  P+VV+F++++N LC  G++D    L   M + G + + + YN +++ +CL G 
Sbjct: 745  MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGE 804

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI------------------------ 216
             + A  L   M++ G   N  ++ I+I   C N  I                        
Sbjct: 805  FSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLI 864

Query: 217  ---------EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                     E AL L   M++ G  PD   Y T+  GLF+    E A KL  EM+  G +
Sbjct: 865  TSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHS 924

Query: 268  ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
             D   Y   I GL K   +  A + F  +     + D   Y+ LID  CK+ ++  AW+L
Sbjct: 925  PDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL 984

Query: 328  FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             RS     +   +  Y+ M+ +LC +   DKA ++  +M++K
Sbjct: 985  LRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSK 1023



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 194/387 (50%), Gaps = 27/387 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  ++  GC  +V TYN L+ GLC+      A    E M    G     C PN V
Sbjct: 328 EAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEG-----CSPNVV 382

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           T++T+I GLC  G V++A E++ +M   E I+PN  TY  L+ G C A D    +  F +
Sbjct: 383 TFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQ 442

Query: 121 MMD---------------------QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           M++                     Q  +P +V++N ++  L K+G + +A  LLE MI+ 
Sbjct: 443 MLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIES 502

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G+ P+   +N+++DG C   R+  A  +F      GC+ NV +YS LI+G  K  +++ A
Sbjct: 503 GLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEA 562

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L L ++M+  G + + V Y+T+  GL ++ ++E A  +  +M+  G   D   Y T IDG
Sbjct: 563 LQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDG 622

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
             K   + EAV L R +    +   +  Y  L  GLC+SGR   A E+   +       +
Sbjct: 623 FFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPN 682

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
            +TY+ ++  LC  G++ +A   F  M
Sbjct: 683 AITYSSIVDGLCKAGRVTEALGYFEKM 709



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 186/358 (51%), Gaps = 12/358 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F K   FG  P V TY+T+I+GLCR         L EEMA G G     C PN V
Sbjct: 19  DAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA-GRG-----CAPNAV 72

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++ L  +G   +A  L  +M      P ++T+  +I G C   +   A  +  EM
Sbjct: 73  TYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEM 132

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P+V    V+++ LC+ G++DEA    + ++ IG  P+A  YNT++DG    GR+
Sbjct: 133 VDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRL 192

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   +        VF+++I ++G  K   + GA   +  M   G+ P+ V Y+ L
Sbjct: 193 EAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDAL 252

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A  L  +       A  +A+ + + GLC+   + EA++L + +  +  
Sbjct: 253 IDGLCKAGKLDIALGLLRDKNSQ---AGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCVP- 308

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  +N L++GLC++ R+  A+ELF  +      ADV+TYNI++  LC   ++ +A
Sbjct: 309 --NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEA 364



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 120/384 (31%), Positives = 190/384 (49%), Gaps = 31/384 (8%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L+   C PNV  +N+L+NGLC+      A  LF+ M          C  + +TY  ++ G
Sbjct: 301 LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESG------CSADVITYNILLKG 354

Query: 70  LCKEGFVDKA-KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-QGVQ 127
           LCK   + +A + + L  + E  +PNVVT+++LI G C A   N+A  ++  M+  +G+ 
Sbjct: 355 LCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGIS 414

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLE----------------------LMIQIGVRPNA 165
           PN  ++  ++  LCK G      +  E                      LM+Q+  RP  
Sbjct: 415 PNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQV-CRPTL 473

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             YNTL+ G   +G V  A  L   M   G   +V +++ +++G CK + I  A +++  
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
            L +G +P+VV Y+TL  GL ++ +++ A +L  +M   G  A+T  Y T +DGL K G 
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 593

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + +AV + R +R      D   YN LIDG  K  RL+ A  L R +        VVTY  
Sbjct: 594 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTT 653

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           + H LC  G+ D+A ++   M A+
Sbjct: 654 LCHGLCRSGRFDEAVEILDYMAAR 677



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 184/346 (53%), Gaps = 18/346 (5%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           TYN LINGLC+ G    A   F +      +FG   +P  VTY+T+IDGLC++  VDK  
Sbjct: 3   TYNVLINGLCKAGRVCDAFTAFRKAI----QFGF--RPTVVTYSTVIDGLCRDNEVDKGC 56

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L  +M      PN VTYN+L++         EA  L   M   G  P +++F +I+  L
Sbjct: 57  KLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGL 116

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G+++ A R+++ M+  G  P+  ++  L+   C  GRV+ A   F  +  +G   + 
Sbjct: 117 CKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDA 176

Query: 201 FSYSILINGYCKNKEIEGA---LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +Y+ +++G  K   +E A   L L +E  S    P V  +     GL +   +  A++ 
Sbjct: 177 VTYNTMVDGLYKAGRLEAAGMVLQLLAESFS---SPTVFTFTIAVDGLSKAGNLTGAYEF 233

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           FD M + GV+ +T  Y   IDGLCK G +  A+ L   LR    +  + A++ L+ GLC+
Sbjct: 234 FDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL---LRDKNSQAGMFAFSSLLHGLCQ 290

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           + RL+ A +L +++P    + +VV +N +++ LC   ++D+A +LF
Sbjct: 291 AHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELF 333



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 146/275 (53%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           +VTYN LI+G C A    +A   F + +  G +P VV+++ +++ LC++ ++D+  +LLE
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  PNA  YNTL++     GR   A  L   M + GC   + ++ ++I G CK  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           EIE A  +  EM+ +G  PDV I+  L   L E+ +V+ A+  F ++   G   D   Y 
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T +DGL K G +  A  + + L        +  +   +DGL K+G L  A+E F S+P+ 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  + VTY+ +I  LC  GK+D A  L  D  ++
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQ 275



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 176/398 (44%), Gaps = 76/398 (19%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  +   +   GC PN  TY+++++GLC+ G    AL  FE+MA        V  P+ +
Sbjct: 666  EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE-----VVAPHVI 720

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT------------------------ 97
             Y+ +IDGLCK G +D+A E   +M      P+VVT                        
Sbjct: 721  AYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGM 780

Query: 98   -----------YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                       YN++I+ +C   +++ A  L  EM   G+  N V+  +++  LC N ++
Sbjct: 781  AERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRI 840

Query: 147  DEA--------------------------SR-------LLELMIQIGVRPNAFVYNTLMD 173
            DEA                          SR       LL  M+  G  P+A  Y T+MD
Sbjct: 841  DEAVSYFHSIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMD 900

Query: 174  GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            G    G    A +L   M S G   ++ +Y+I+I+G  K K++  A   + EML K +KP
Sbjct: 901  GLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKP 960

Query: 234  DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            D ++Y++L     +  +V+ A+KL   ++  G+      Y T +D LCKN    +A+E+ 
Sbjct: 961  DAIVYSSLIDAFCKADKVDDAWKL---LRSSGIEPTITMYSTMVDSLCKNRGTDKALEVI 1017

Query: 294  RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            R ++    E  I  +  L       GR+  A +L   L
Sbjct: 1018 REMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDL 1055



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 187/437 (42%), Gaps = 93/437 (21%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN  TYNTL+N L   G    A +L E MA  NG     C P  +T+  II GLCKE
Sbjct: 66  GCAPNAVTYNTLVNALLGQGRAKEAFSLLERMA-ANG-----CPPELITFGLIIKGLCKE 119

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++ A  +  +M D    P+V  +  L+H  C     +EA   F +++  G  P+ V++
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179

Query: 134 NVIMNELCKNGKMDEASRLLEL-----------------------------------MIQ 158
           N +++ L K G+++ A  +L+L                                   M Q
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVN-----------------------------RAEELFV 189
            GV PN   Y+ L+DG C  G+++                             R EE   
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQ 299

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +++M C  NV  ++ L+NG C+ + ++ A  L+  M   G   DV+ YN L  GL ++ 
Sbjct: 300 LLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLR 359

Query: 250 QVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKYELDIRA 307
           ++  A++  + M+R  G + +   + T I GLC  G + +A E++ R + +     +   
Sbjct: 360 RIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFT 419

Query: 308 YNCLIDGLCKSGR-----------LKIAWELFRSLP----------RGVLIADVVTYNIM 346
           Y  L++GLCK+G            L+  W    S P            V    +VTYN +
Sbjct: 420 YAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTL 479

Query: 347 IHALCADGKMDKARDLF 363
           +  L   G +  A  L 
Sbjct: 480 VTGLSKSGMVRDALGLL 496


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 131/353 (37%), Positives = 195/353 (55%), Gaps = 10/353 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           ++ T+N  I+GLCR      A  +F+ M   +G +     PN +TY  ++ GLC  G + 
Sbjct: 49  DISTFNIYISGLCRASRIGDAQTVFDGMRK-HGFW-----PNRITYNALLSGLCNGGRMS 102

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A+ L+ +M     +P+VVTYN+L+HGFC     +EA  +F   + +G  P+VV++N ++
Sbjct: 103 DAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALI 162

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N  CK  K+DEA R+L+ M+   + P+   YN+L++G C  GRV+ A  L V     G  
Sbjct: 163 NGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV---DKGFS 219

Query: 198 HNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
            NV +YS LI+G C+  + +E A  L  +M+  G KPD+V YN L  GL     V  A K
Sbjct: 220 PNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALK 279

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF  + R G   +   Y   IDGL K   + EA ELF  L     E D   Y   IDGLC
Sbjct: 280 LFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 339

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K+GR++ A  + + +     + DVV++N +I+ LC + ++D+A  L   MEAK
Sbjct: 340 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 392



 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/366 (34%), Positives = 201/366 (54%), Gaps = 10/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +R  G  PN  TYN L++GLC  G    A  L+E M            P+ V
Sbjct: 68  DAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAG------YSPDVV 121

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G CK G +D+A ++F         P+VVTYN+LI+GFC A+  +EA+ +   M
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT-GR 180
           + + + P+VV++N ++N LCKNG++DEA  L+   +  G  PN   Y+TL+ G C    R
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRR 238

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   M   GCK ++ SY+ LI+G  + + +  AL L+  +L +G +P+V  YN 
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +V  AF+LF  + +HG+  D   Y  FIDGLCK G + +A+ + + +    
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+ ++N +I+GLCK  R+  A  L   +       + +++N +I   C  GK  KA 
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418

Query: 361 DLFLDM 366
             F +M
Sbjct: 419 TTFKEM 424



 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 129/372 (34%), Positives = 199/372 (53%), Gaps = 13/372 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++      P+V TYN+L+NGLC+ G    A  L  +             PN +
Sbjct: 173 EAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKG---------FSPNVI 223

Query: 62  TYTTIIDGLCKE-GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY+T+I GLC+E   ++ A++L  KM      P++V+YN+LIHG       +EA  LF  
Sbjct: 224 TYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGS 283

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ QG +P V ++N++++ L K  +++EA  L   +++ G+ P+A  Y   +DG C  GR
Sbjct: 284 VLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 343

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  +   M+  GC  +V S++ +ING CK K ++ A  L S M +KG  P+ + +NT
Sbjct: 344 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 403

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK---NGYIVEAVELFRTLR 297
           L  G     + ++A   F EM + GV      Y   +DGLCK    G I EA+ LF  + 
Sbjct: 404 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 463

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  Y+ LIDGL K+G+L  A  L  ++     I +V TYN +I  LC   K+D
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523

Query: 358 KARDLFLDMEAK 369
           +A +LF+ M  K
Sbjct: 524 EALELFVAMVEK 535



 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/355 (36%), Positives = 192/355 (54%), Gaps = 12/355 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLC 71
           G  PNV TY+TLI+GLCR    +  A  L E+M  NG       CKP+ V+Y  +I GL 
Sbjct: 217 GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG-------CKPDIVSYNALIHGLA 269

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +E  V +A +LF  +  +   P V TYN LI G    +  NEA  LF  ++  G++P+ +
Sbjct: 270 REQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAI 329

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++ V ++ LCK G++++A  +L+ M + G  P+   +N +++G C   RV+ AE L   M
Sbjct: 330 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 389

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ- 250
           E+ GC  N  S++ LI G C+  + + A++ + EML +G+KP VV YN L  GL +  Q 
Sbjct: 390 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 449

Query: 251 --VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             ++ A  LFD M   G   D   Y   IDGL K G + +A  L   +       ++  Y
Sbjct: 450 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 509

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           N LI GLC   ++  A ELF ++     + D +TY  +I ALC    +DKA  LF
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALF 564



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/407 (33%), Positives = 215/407 (52%), Gaps = 48/407 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL+ ++   G  P+V TYNTL++G C+ G    AL +F    +G  + G V  P+ V
Sbjct: 103 DAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIF----DGAVKRGFV--PDVV 156

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+G CK   +D+A+ +  +M  E++ P+VVTYNSL++G C     +EA+ L +  
Sbjct: 157 TYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIV-- 214

Query: 122 MDQGVQPNVVSFNVIMNELCKN-GKMDEASRLLELMIQIGVRP-----NAFV-------- 167
            D+G  PNV++++ +++ LC+   +++ A +LLE M+  G +P     NA +        
Sbjct: 215 -DKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQG 273

Query: 168 ----------------------YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                                 YN L+DG     RVN A ELF  +   G + +  +Y++
Sbjct: 274 VSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 333

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            I+G CK   +E AL +  +M  KG  PDVV +N +  GL +  +V+ A  L   M+  G
Sbjct: 334 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 393

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS---GRLK 322
            + +  ++ T I G C+ G   +A+  F+ +     +  +  YN L+DGLCK+   GR+K
Sbjct: 394 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 453

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  LF ++     + DVVTY+ +I  L   GK+D AR L   MEAK
Sbjct: 454 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 107/296 (36%), Positives = 169/296 (57%), Gaps = 9/296 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  L   G EP+  TY   I+GLC+ G    AL + ++M          C P+ V
Sbjct: 311 EAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG------CVPDVV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++  +I+GLCKE  VD+A+ L   M+ +  +PN +++N+LI G C A  W +A   F EM
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424

Query: 122 MDQGVQPNVVSFNVIMNELCK---NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           + +GV+P VV++N++++ LCK    G++ EA  L + MI+ G  P+   Y+ L+DG    
Sbjct: 425 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 484

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+++ A  L  +ME+ GC  NV++Y+ LI+G C   +++ AL L+  M+ KG  PD + Y
Sbjct: 485 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITY 544

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
            T+   L +   V++A  LFD     GV   +  Y + IDGLC    + EA++L +
Sbjct: 545 GTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/366 (34%), Positives = 190/366 (51%), Gaps = 11/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  K+ + GC+P++ +YN LI+GL R      AL LF  +     E      P   
Sbjct: 241 SARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYE------PEVP 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +IDGL KE  V++A ELF  +    + P+ +TY   I G C A    +A  +  +M
Sbjct: 295 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P+VVS N ++N LCK  ++DEA  LL  M   G  PNA  +NTL+ G C  G+ 
Sbjct: 355 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKE---IEGALSLYSEMLSKGIKPDVVIY 238
            +A   F  M   G K  V +Y+IL++G CK ++   I+ A++L+  M+ KG  PDVV Y
Sbjct: 415 KKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTY 474

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           + L  GL +  +++ A +L   M+  G   + + Y + I GLC    + EA+ELF  +  
Sbjct: 475 SALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVE 534

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALCADGKMD 357
                D   Y  +I  LCK   +  A  LF  SL  GV+    + ++ +I  LCA  ++D
Sbjct: 535 KGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFS-LIDGLCAVARVD 593

Query: 358 KARDLF 363
           +A  L 
Sbjct: 594 EALKLL 599



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/331 (35%), Positives = 167/331 (50%), Gaps = 9/331 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +   G EP V TYN LI+GL +      A  LF  +     E      P+ +
Sbjct: 276 EALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLE------PDAI 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT  IDGLCK G V+ A  +   M ++   P+VV++N++I+G C     +EA+ L   M
Sbjct: 330 TYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT--- 178
             +G  PN +SFN ++   C+ GK  +A    + M++ GV+P    YN L+DG C     
Sbjct: 390 EAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE 449

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GR+  A  LF +M   G   +V +YS LI+G  K  +++ A  L   M +KG  P+V  Y
Sbjct: 450 GRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTY 509

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L  GL  + +V+ A +LF  M   G   DT  Y T I  LCK   + +A+ LF     
Sbjct: 510 NSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE 569

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
                    Y  LIDGLC   R+  A +L +
Sbjct: 570 AGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/345 (30%), Positives = 175/345 (50%), Gaps = 34/345 (9%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  T   ++  L K G ++KA     ++  + +  ++ T+N  I G C A+   +A+ +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRASRIGDAQTV 72

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M   G  PN +++N +++ LC  G+M +A  L E MI+ G  P+   YNTL+ GFC 
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+++ A ++F      G   +V +Y+ LING+CK  +++ A  +   M+S+ + PDVV 
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 238 YNTLFIGL---------------------------------FEIHQVERAFKLFDEMQRH 264
           YN+L  GL                                  E+ ++E A +L ++M  +
Sbjct: 193 YNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D  +Y   I GL +   + EA++LF ++    YE ++  YN LIDGL K  R+  A
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +ELF  L +  L  D +TY + I  LC  G+++ A  +  DM+ K
Sbjct: 313 FELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEK 357


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/396 (34%), Positives = 207/396 (52%), Gaps = 30/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EAA +F  +   G +P++ +Y+ L++G    G  +   NLF  M                
Sbjct: 395 EAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILI 454

Query: 47  NGNGEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           N + + G++                PN VTY T+I  LC+ G +  A E   +M    + 
Sbjct: 455 NAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLK 514

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV-QPNVVSFNVIMNELCKNGKMDEASR 151
           PN V Y+SLI GFC   D  +AK L  EMMDQG+ +PN+  F+ I++ LC  G++  A  
Sbjct: 515 PNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQD 574

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +  L+I IG RP+ F +N+L+DG+CL G++++A  +  +M S G + +V +YS LINGY 
Sbjct: 575 VFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYF 634

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+  I+  L L+ EML K +KP  V Y+ +  GLF   +   A K+F EM   G A    
Sbjct: 635 KSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSIS 694

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   + GLC+N    EA+ LF  L  +  + +I   N +I  L K  R + A +LF S+
Sbjct: 695 TYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASV 754

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
               L+ +  TY +MI  L  +G +++A  +F  ME
Sbjct: 755 SASGLVPNASTYGVMIINLLKEGSVEEADIMFSSME 790



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 193/359 (53%), Gaps = 6/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+ F+YNT+I  LC    +  AL++   M  G+G     C P+ V+YT 
Sbjct: 223 LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDG-----CSPDVVSYTM 277

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL  EG + KA  LF +M  + + PNVVTYNS++H  C A   ++A+ +  +M D  
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +QP+ V++  +++     G+  EA+++ + M + G+ P+   +N+LMD  C   R   A 
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F S+ + G K ++ SYSIL++GY          +L+  M   GI  D   +N L    
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A  +F EM+  GV+ +   Y T I  LC+ G + +A+E    +  +  + + 
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y+ LI G C  G L  A EL    + +G+   ++  ++ +IH+LC +G++  A+D+F
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVF 576



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 202/404 (50%), Gaps = 45/404 (11%)

Query: 5   ALFMKLRVF---GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           AL M LR+    GC P+V +Y  +I+GL   G    A NLF EM     + GVV  PN V
Sbjct: 255 ALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMV----QKGVV--PNVV 308

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +I+  LCK   +DKA+ +  +M D +I P+ VTY ++IHG+     W EA  +F EM
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM 368

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P++V+FN +M+ LCK+ +  EA+ +   +   G +P+   Y+ L+ G+   GR 
Sbjct: 369 TREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRF 428

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                LF SM   G   +   ++ILIN + K   ++ AL +++EM  +G+ P+VV Y T+
Sbjct: 429 VDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATV 488

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL----- 296
              L  + ++  A +   +M   G+  +T  Y + I G C +G +++A EL   +     
Sbjct: 489 IAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI 548

Query: 297 -------------------RILKYE------------LDIRAYNCLIDGLCKSGRLKIAW 325
                              R++  +             DI  +N LIDG C  G++  A+
Sbjct: 549 PRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAF 608

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  ++       DVVTY+ +I+     G++D    LF +M  K
Sbjct: 609 GVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCK 652



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 182/390 (46%), Gaps = 42/390 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++R  G  PNV TY T+I  LCR G    A+    +M        +  KPNTV
Sbjct: 465 EALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQM------ISIGLKPNTV 518

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENI------------------------------ 91
            Y ++I G C  G + KAKEL  +M D+ I                              
Sbjct: 519 VYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNL 578

Query: 92  ------NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                  P++ T+NSLI G+C     ++A  +   M+  G +P+VV+++ ++N   K+G+
Sbjct: 579 VIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGR 638

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+   L   M+   V+P    Y+ ++DG    GR + A+++F  M   G   ++ +Y+I
Sbjct: 639 IDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTI 698

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++ G C+N   + A++L+ ++ +  +K ++ I NT+   L+++ + E A  LF  +   G
Sbjct: 699 ILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASG 758

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +   Y   I  L K G + EA  +F ++         R  N +I  L + G +  A 
Sbjct: 759 LVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQKGEIVKAG 818

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGK 355
                +   ++  +  T +++I    + G+
Sbjct: 819 YYMSKVDGTIISLEASTTSLLISLFASKGR 848



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 155/322 (48%), Gaps = 3/322 (0%)

Query: 51  EFGVVCKPNTV-TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
           E G    P TV TY  ++D  C+    D     F ++    +  + +  N+ +   CYA 
Sbjct: 155 EAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAK 214

Query: 110 DWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEA-SRLLELMIQIGVRPNAFV 167
             +EA  + +  M + G  P+  S+N ++  LC   +  EA   LL +    G  P+   
Sbjct: 215 RTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVS 274

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y  ++ G  + G +++A  LF  M   G   NV +Y+ +++  CK + ++ A  +  +M 
Sbjct: 275 YTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMF 334

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
              I+PD V Y  +  G   + + + A K+F EM R G+  D   + + +D LCK+    
Sbjct: 335 DNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSK 394

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           EA E+F ++    ++ DI +Y+ L+ G    GR      LF S+    ++AD   +NI+I
Sbjct: 395 EAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILI 454

Query: 348 HALCADGKMDKARDLFLDMEAK 369
           +A    G MD+A  +F +M  +
Sbjct: 455 NAHAKRGMMDEALLIFTEMRGQ 476



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/351 (24%), Positives = 158/351 (45%), Gaps = 8/351 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
            V TY  L++  CR     +    F  +           + + +   T +  LC     D
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAG------LRTDGIVTNTFLKCLCYAKRTD 217

Query: 78  KAKELFL-KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-QGVQPNVVSFNV 135
           +A  + L +M +    P+  +YN++I   C  +   EA  + + M    G  P+VVS+ +
Sbjct: 218 EALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTM 277

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L   G++ +A  L   M+Q GV PN   YN+++   C    +++AE +   M    
Sbjct: 278 VIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNS 337

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +  +Y+ +I+GY      + A  ++ EM  +G+ PD+V +N+L   L +  + + A 
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++F  +   G   D  +Y   + G    G  V+   LF ++       D   +N LI+  
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            K G +  A  +F  +    +  +VVTY  +I ALC  G++  A +    M
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQM 508



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 124/254 (48%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A  +F  +   G  P++FT+N+LI+G C  G    A  + + M +   E      P+ 
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTE------PDV 623

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I+G  K G +D    LF +M  + + P  VTY+ ++ G   A   + AK +F E
Sbjct: 624 VTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHE 683

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G   ++ ++ +I+  LC+N   DEA  L   +  + ++    + NT++       R
Sbjct: 684 MIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKR 743

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF S+ + G   N  +Y ++I    K   +E A  ++S M   G  P   + N 
Sbjct: 744 REEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLND 803

Query: 241 LFIGLFEIHQVERA 254
           +   L +  ++ +A
Sbjct: 804 IIRMLLQKGEIVKA 817


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 196/358 (54%), Gaps = 8/358 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V+TYN++I+GLC+ G    A+   ++M   +      C PNTVTY T+I  LCKE
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRD------CSPNTVTYNTLISTLCKE 378

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++A EL   +  + I P+V T+NSLI G C   +   A  LF EM  +G +P+  ++
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC  GK+DEA  +L+ M   G   +   YNTL+DGFC   ++  AEE+F  ME 
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEV 498

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +Y+ LI+G CK++ +E A  L  +M+ +G KPD   YN+L         +++
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKK 558

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M  +G   D   Y T I GLCK G +  A +L R++++    L   AYN +I 
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQ 618

Query: 314 GLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
           GL +  +   A  LFR  L +     D V+Y I+   LC   G + +A D  +++  K
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK 676



 Score =  231 bits (590), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 201/357 (56%), Gaps = 5/357 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FGC  +  + N +++G C+ G    ALN  +EM+N +G F     P+  T+ T+++GLCK
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCK 307

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G V  A E+   M  E  +P+V TYNS+I G C   +  EA     +M+ +   PN V+
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++ LCK  +++EA+ L  ++   G+ P+   +N+L+ G CLT     A ELF  M 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S GC+ + F+Y++LI+  C   +++ AL++  +M   G    V+ YNTL  G  + +++ 
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIR 487

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++FDEM+ HGV+ ++  Y T IDGLCK+  + +A +L   + +   + D   YN L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLL 547

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              C+ G +K A ++ +++       D+VTY  +I  LC  G+++ A  L   ++ K
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 191/359 (53%), Gaps = 7/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+ V+G +P+V T+N LI  LCR      A+ + E+M +    +G+V  P+  T+TTI+ 
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS----YGLV--PDEKTFTTIMQ 232

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQ 127
           G  +EG +D A  +  +M +   + + V+ N ++HGFC      +A     EM +Q G  
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +FN ++N LCK G +  A  ++++M+Q G  P+ + YN+++ G C  G V  A E 
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEF 352

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M +  C  N  +Y+ LI+  CK  ++E A  L   + SKGI PDV  +N+L  GL  
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
                 A +LF+EM+  G   D + Y   ID LC  G + EA+ + + + +      +  
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           YN LIDG CK+ +++ A E+F  +    +  + VTYN +I  LC   +++ A  L   M
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQM 531



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/294 (37%), Positives = 167/294 (56%), Gaps = 8/294 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   L   G  P+V T+N+LI GLC T +  VA+ LFEEM +        C+P+  
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEF 436

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC +G +D+A  +  +M+      +V+TYN+LI GFC AN   EA+ +F EM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEM 496

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  N V++N +++ LCK+ ++++AS+L++ MI  G +P+ F YN+L+  FC  G +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDI 556

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M S GC+ ++ +Y  LI+G CK   +E A  L   +  KGI      YN +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPV 616

Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCK-NGYIVEAVELF 293
             GLF   +   A  LF EM +++  A D  +YR    GLC   G I EAV+  
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFL 670



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 173/359 (48%), Gaps = 10/359 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F  EP +  Y  ++  L R+G       + E+M N   E G      T  +  +I+   +
Sbjct: 79  FSPEPAL--YEEILLRLGRSGSFDDMRKILEDMKNSGCEMG------TSPFLILIESYAQ 130

Query: 73  EGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
               D+   +   M D+  + P+   YN +++     N+    +    +M   G++P+V 
Sbjct: 131 FELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVS 190

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FNV++  LC+  ++  A  +LE M   G+ P+   + T+M G+   G ++ A  +   M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQM 250

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQ 250
              GC  +  S +++++G+CK   +E AL+   EM ++ G  PD   +NTL  GL +   
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A ++ D M + G   D + Y + I GLCK G + EAVE    +       +   YN 
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNT 370

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI  LCK  +++ A EL R L    ++ DV T+N +I  LC       A +LF +M +K
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/340 (27%), Positives = 157/340 (46%), Gaps = 51/340 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++R  GCEP+ FTYN LI+ LC  G    ALN+ ++M          C  + +T
Sbjct: 419 AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG------CARSVIT 472

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG CK   + +A+E+F +M+   ++ N VTYN+LI G C +    +A  L  +M+
Sbjct: 473 YNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMI 532

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P+  ++N ++   C+ G + +A+ +++ M   G  P+   Y TL+ G C  GRV 
Sbjct: 533 MEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVE 592

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-------------- 228
            A +L  S++  G      +Y+ +I G  + ++   A++L+ EML               
Sbjct: 593 VASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652

Query: 229 -----------------------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE-MQRH 264
                                  KG  P+      L  GL  +   E   KL +  MQ+ 
Sbjct: 653 FRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQKA 712

Query: 265 GVAADTWAY-------RTFIDGLCKNGYIVEAVELFRTLR 297
             + +  +        R F D L   G ++++ +  RT R
Sbjct: 713 RFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQPRRTYR 752



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 8/159 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   GCEP++ TY TLI+GLC+ G   VA  L   +       G+   P+  
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK----GIALTPH-- 611

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCY-ANDWNEAKCLFI 119
            Y  +I GL ++    +A  LF +M ++N   P+ V+Y  +  G C       EA    +
Sbjct: 612 AYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLV 671

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           E++++G  P   S  ++   L      +   +L+ +++Q
Sbjct: 672 ELLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVNMVMQ 710


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 204/367 (55%), Gaps = 8/367 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     K+   G  P+ FTY +LI G CR      A  +F  M N        C+ N 
Sbjct: 231 VEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKG------CRRNE 284

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN-EAKCLFI 119
           V+YTTII GLC+ G +D+   LF KM++++  P V TY  +IH   + ND N E   LF 
Sbjct: 285 VSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHAL-FGNDRNLEGMDLFN 343

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM ++  +PNV ++ V+++ +CK  K+DE+ R+L  M++ G+ P+   YN L+ G+C  G
Sbjct: 344 EMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG 403

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+  A E+   MES  C+ N  +Y+ LI G+ K K +  A++L S+ML   + P +V YN
Sbjct: 404 RIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYN 463

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L     +    + A+KL D ++ +G+  D W Y  FID LCK+  + EA +LF +L+  
Sbjct: 464 SLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +   Y  LIDG CK+G++  A  L   +     + +  TYN +I+ +C +GK+ + 
Sbjct: 524 GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG 583

Query: 360 RDLFLDM 366
             +  +M
Sbjct: 584 LSMVENM 590



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 182/349 (52%), Gaps = 6/349 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E   LF ++R   CEPNV TY  +++ +C+      +  +  EM     E G+V  P+ 
Sbjct: 336 LEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMM----EKGLV--PSV 389

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I G C+EG ++ A E+   M+  N  PN  TYN LI GF      ++A  L  +
Sbjct: 390 VTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSK 449

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++  + P++V++N +++  CK G  D A +LL+L+ + G+ P+ + Y+  +D  C + R
Sbjct: 450 MLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKR 509

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +LF S++  G K N   Y+ LI+G+CK  +I+ A+SL   M S+   P+   YN+
Sbjct: 510 MEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNS 569

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G+ +  +V+    + + M + GV      Y   I+ + + G    A  +F  +    
Sbjct: 570 LIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFG 629

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           ++ D+  Y   I   C SG +K A  +   +    ++ D +TY ++I A
Sbjct: 630 HKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISA 678



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 171/352 (48%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V +YN L+  L R         ++ EM N       +  PN  T  T+++   K G + 
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLND------MIVPNIYTLNTMVNAYSKMGNIV 231

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A     K+    ++P+  TY SLI G+C  ND N A  +F  M ++G + N VS+  I+
Sbjct: 232 EANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTII 291

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + LC+ G++DE   L + M +    P    Y  ++       R     +LF  M    C+
Sbjct: 292 HGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCE 351

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +Y+++++  CK ++++ +  + +EM+ KG+ P VV YN L  G  E  ++E A ++
Sbjct: 352 PNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEI 411

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
              M+ +    +   Y   I G  K  ++ +A+ L   +   K    +  YN LI   CK
Sbjct: 412 LGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCK 471

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +G    A++L   L    L+ D  TY++ I  LC   +M++A DLF  ++ K
Sbjct: 472 AGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 140/318 (44%), Gaps = 41/318 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYN LI G C  G    AL +   M + N      C+PN  TY  +I G  K 
Sbjct: 384 GLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN------CRPNERTYNELICGFSKR 437

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA--------------------NDWN- 112
             V KA  L  KM +  + P++VTYNSLIH  C A                    + W  
Sbjct: 438 KHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTY 497

Query: 113 --------------EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                         EA  LF  + ++G++ N V +  +++  CK GK+DEA  LLE M  
Sbjct: 498 SVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHS 557

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               PN+  YN+L+ G C  G+V     +  +M  MG K  V +Y+ILI    +  + + 
Sbjct: 558 EDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDH 617

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  ++++M+S G KPDV  Y            V+ A  +   M   GV  D+  Y   I 
Sbjct: 618 ANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLIS 677

Query: 279 GLCKNGYIVEAVELFRTL 296
              + G   +A  + + +
Sbjct: 678 AYERLGLAYDAFNVLKRM 695



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 119/239 (49%), Gaps = 6/239 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   L+  G  P+ +TY+  I+ LC++     A +LF    N   E G+  K N V 
Sbjct: 478 AYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLF----NSLKEKGI--KANEVM 531

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +IDG CK G +D+A  L  +M  E+  PN  TYNSLI+G C      E   +   M 
Sbjct: 532 YTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS 591

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV+P V ++ +++ E+ + G  D A+R+   M+  G +P+ + Y   +  +C +G V 
Sbjct: 592 KMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVK 651

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            AE +   M   G   +  +Y++LI+ Y +      A ++   ML  G  P   I+N L
Sbjct: 652 EAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 94/171 (54%), Gaps = 6/171 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  ++    C PN  TYN+LI G+C+ G     L++ E M+    + GV  KP   
Sbjct: 547 EAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMS----KMGV--KPTVA 600

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I+ + +EG  D A  +F +M      P+V TY + IH +C + +  EA+ +   M
Sbjct: 601 TYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARM 660

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           ++ GV P+ +++ ++++   + G   +A  +L+ M+  G  P+  ++N L+
Sbjct: 661 IEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 86/173 (49%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +V SY+ L+    +   I+    +Y+EML+  I P++   NT+     ++  +  A  
Sbjct: 176 KLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANL 235

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
              ++ + G++ D++ Y + I G C+N  +  A ++F  +       +  +Y  +I GLC
Sbjct: 236 YVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLC 295

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++GR+     LF+ +        V TY ++IHAL  + +  +  DLF +M  +
Sbjct: 296 EAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRER 348


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 196/358 (54%), Gaps = 8/358 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V+TYN++I+GLC+ G    A+ + ++M   +      C PNTVTY T+I  LCKE
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------CSPNTVTYNTLISTLCKE 378

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++A EL   +  + I P+V T+NSLI G C   +   A  LF EM  +G +P+  ++
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC  GK+DEA  +L+ M   G   +   YNTL+DGFC   +   AEE+F  ME 
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +Y+ LI+G CK++ +E A  L  +M+ +G KPD   YN+L         +++
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M  +G   D   Y T I GLCK G +  A +L R++++    L   AYN +I 
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618

Query: 314 GLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
           GL +  +   A  LFR  L +     D V+Y I+   LC   G + +A D  +++  K
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK 676



 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 201/357 (56%), Gaps = 5/357 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FGC  +  + N +++G C+ G    ALN  +EM+N +G F     P+  T+ T+++GLCK
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCK 307

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G V  A E+   M  E  +P+V TYNS+I G C   +  EA  +  +M+ +   PN V+
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++ LCK  +++EA+ L  ++   G+ P+   +N+L+ G CLT     A ELF  M 
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S GC+ + F+Y++LI+  C   +++ AL++  +M   G    V+ YNTL  G  + ++  
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++FDEM+ HGV+ ++  Y T IDGLCK+  + +A +L   + +   + D   YN L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              C+ G +K A ++ +++       D+VTY  +I  LC  G+++ A  L   ++ K
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 191/359 (53%), Gaps = 7/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+ V+G +P+V T+N LI  LCR      A+ + E+M +    +G+V  P+  T+TT++ 
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS----YGLV--PDEKTFTTVMQ 232

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQ 127
           G  +EG +D A  +  +M +   + + V+ N ++HGFC      +A     EM +Q G  
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +FN ++N LCK G +  A  ++++M+Q G  P+ + YN+++ G C  G V  A E+
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M +  C  N  +Y+ LI+  CK  ++E A  L   + SKGI PDV  +N+L  GL  
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
                 A +LF+EM+  G   D + Y   ID LC  G + EA+ + + + +      +  
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           YN LIDG CK+ + + A E+F  +    +  + VTYN +I  LC   +++ A  L   M
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/294 (36%), Positives = 166/294 (56%), Gaps = 8/294 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   L   G  P+V T+N+LI GLC T +  VA+ LFEEM +        C+P+  
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEF 436

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC +G +D+A  +  +M+      +V+TYN+LI GFC AN   EA+ +F EM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  N V++N +++ LCK+ ++++A++L++ MI  G +P+ + YN+L+  FC  G +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M S GC+ ++ +Y  LI+G CK   +E A  L   +  KGI      YN +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616

Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCK-NGYIVEAVELF 293
             GLF   +   A  LF EM +++    D  +YR    GLC   G I EAV+  
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 174/359 (48%), Gaps = 10/359 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F  EP +  Y  ++  L R+G       + E+M +   E G      T T+  +I+   +
Sbjct: 79  FSPEPAL--YEEILLRLGRSGSFDDMKKILEDMKSSRCEMG------TSTFLILIESYAQ 130

Query: 73  EGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
               D+   +   M DE  + P+   YN +++     N     +    +M   G++P+V 
Sbjct: 131 FELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVS 190

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FNV++  LC+  ++  A  +LE M   G+ P+   + T+M G+   G ++ A  +   M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQ 250
              GC  +  S +++++G+CK   +E AL+   EM ++ G  PD   +NTL  GL +   
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A ++ D M + G   D + Y + I GLCK G + EAVE+   +       +   YN 
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI  LCK  +++ A EL R L    ++ DV T+N +I  LC       A +LF +M +K
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 147/306 (48%), Gaps = 16/306 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++ + GC  +V TYNTLI+G C+   T  A  +F+EM     E   V + N+V
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-----EVHGVSR-NSV 506

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDGLCK   V+ A +L  +M  E   P+  TYNSL+  FC   D  +A  +   M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++V++  +++ LCK G+++ AS+LL  +   G+      YN ++ G     + 
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626

Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPDVVIYN 239
             A  LF  M E      +  SY I+  G C     I  A+    E+L KG  P+     
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686

Query: 240 TLFIGLFEIHQVERAFKLFDE-MQRHGVAADTWAY-------RTFIDGLCKNGYIVEAVE 291
            L  GL  +   E   KL +  MQ+   + +  +        R F D L   G ++++ +
Sbjct: 687 MLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQ 746

Query: 292 LFRTLR 297
             RT R
Sbjct: 747 PRRTYR 752


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  234 bits (597), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 204/368 (55%), Gaps = 11/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVA---LNLFEEMANGNGEFGVVCKP 58
           EA  +   +R  GC PN  TYNTL+   CR G    A   ++L  E  N         KP
Sbjct: 170 EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNA--------KP 221

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N VT+ ++++GLCK G ++ A+++F +M  E + P+VV+YN+L+ G+C     +E+  +F
Sbjct: 222 NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVF 281

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  +G+ P+VV+F  +++  CK G +++A  L+  M + G+R N   +  L+DGFC  
Sbjct: 282 SEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKK 341

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++ A      M   G + +V  Y+ LINGYCK   ++ A  L  EM +K +KPDVV Y
Sbjct: 342 GFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTY 401

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +T+  G  ++  ++ AF+L  +M + GV  D   Y + I GLC+   + +A ELF  +  
Sbjct: 402 STIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQ 461

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L  + D   Y  LIDG CK G ++ A  L   + R  ++ DVVTY+++I+ L    +  +
Sbjct: 462 LGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKE 521

Query: 359 ARDLFLDM 366
           A  L   +
Sbjct: 522 AHRLLFKL 529



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 188/354 (53%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV+TYN L+  LC  G    A+ +  +M       G  C PN VTY T++   C+ 
Sbjct: 147 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMR------GAGCAPNAVTYNTLVAAFCRA 200

Query: 74  GFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G +D A+ +   M++E N  PN+VT+NS+++G C A     A+ +F EM+ +G+ P+VVS
Sbjct: 201 GELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 260

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++  CK G + E+  +   M Q G+ P+   + +L+   C  G + +A  L   M 
Sbjct: 261 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 320

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + N  +++ LI+G+CK   ++ AL    EM   GI+P VV YN L  G  ++ +++
Sbjct: 321 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMD 380

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L  EM+   V  D   Y T I G CK G +  A +L + +       D   Y+ LI
Sbjct: 381 LARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLI 440

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GLC+  RL  A ELF ++ +  +  D  TY  +I   C +G ++KA  L  +M
Sbjct: 441 RGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 207/380 (54%), Gaps = 21/380 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+ A+F ++   G  P+V T+ +LI+  C+ G+   A+ L  +M     E G+  + N V
Sbjct: 276 ESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR----ERGL--RMNEV 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDG CK+GF+D A     +M+   I P+VV YN+LI+G+C     + A+ L  EM
Sbjct: 330 TFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V+P+VV+++ I++  CK G +D A +L + M++ GV P+A  Y++L+ G C   R+
Sbjct: 390 EAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRL 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ELF +M  +G + + F+Y+ LI+G+CK   +E ALSL+ EM+ KG+ PDVV Y+ L
Sbjct: 450 NDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR---------------TFIDGLCKNGYI 286
             GL +  + + A +L  ++       D   Y                  + G C  G +
Sbjct: 510 INGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLM 569

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA ++++++    ++LD   Y+ LI G C+ G ++ A    + + R     +  +   +
Sbjct: 570 KEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISL 629

Query: 347 IHALCADGKMDKARDLFLDM 366
           +  L  +G + +A +   D+
Sbjct: 630 VRGLFEEGMVVEADNAIQDL 649



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 162/313 (51%), Gaps = 2/313 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   Y  ++  L  +  +  A+     M    + PNV TYN L+   C      EA  +
Sbjct: 116 PSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGV 174

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFC 176
             +M   G  PN V++N ++   C+ G++D A R++ LM + G  +PN   +N++++G C
Sbjct: 175 VGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLC 234

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  A ++F  M   G   +V SY+ L++GYCK   +  +L+++SEM  +G+ PDVV
Sbjct: 235 KAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVV 294

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + +L     +   +E+A  L  +M+  G+  +   +   IDG CK G++ +A+     +
Sbjct: 295 TFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEM 354

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R    +  +  YN LI+G CK GR+ +A EL R +    +  DVVTY+ +I   C  G +
Sbjct: 355 RKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNL 414

Query: 357 DKARDLFLDMEAK 369
           D A  L   M  K
Sbjct: 415 DSAFQLNQKMLKK 427



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 169/362 (46%), Gaps = 56/362 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++R  G   N  T+  LI+G C+ G    AL   EEM     + G+  +P+ V
Sbjct: 311 QAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMR----KCGI--QPSVV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I+G CK G +D A+EL  +M+ + + P+VVTY+++I G+C   + + A  L  +M
Sbjct: 365 CYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV P+ ++++ ++  LC+  ++++A  L E M+Q+GV+P+ F Y TL+DG C  G V
Sbjct: 425 LKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNV 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGY------------------------------- 210
            +A  L   M   G   +V +YS+LING                                
Sbjct: 485 EKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDAL 544

Query: 211 ---CKNKEIEGALSL----------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              C   E +  ++L                Y  ML +  K D  +Y+ L  G      V
Sbjct: 545 MLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNV 604

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            +A     +M R G + ++ +  + + GL + G +VEA    + L       D  A   L
Sbjct: 605 RKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKAL 664

Query: 312 ID 313
           ID
Sbjct: 665 ID 666


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/362 (35%), Positives = 207/362 (57%), Gaps = 19/362 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++   +R  G  PNV+TYNTL++G C+  +   AL L+++M    GE G+V  P+ V
Sbjct: 235 EAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDML---GE-GLV--PDVV 288

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +IDGLCK G +  A+ LF+ M   ++ PN+  YNSLI  +C   D +EA  LF+E+
Sbjct: 289 TFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLEL 348

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+V ++++++  LC   + +EA  + E M + G+  N+  YN+L+DG C  G++
Sbjct: 349 ERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKM 408

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A E+   M   G + NV ++S LI+GYCK + ++ A+ +YSEM+ K + PDVV Y  +
Sbjct: 409 DKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAM 468

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT---LRI 298
             G  +   ++ A KL+ +M  +G+  + +     +DGLCK+G I +A+ELF      + 
Sbjct: 469 IDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQT 528

Query: 299 LKYELDIR----------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
            +  +D            AY  LI GLC+ G+   A +LF  + R  L  D V Y +M+ 
Sbjct: 529 PRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLR 588

Query: 349 AL 350
            L
Sbjct: 589 GL 590



 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/352 (33%), Positives = 199/352 (56%), Gaps = 6/352 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V T+ TLI+G CR G  + A  +F+EM       G+V  P  + YT +I GLC +
Sbjct: 177 GLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK----GIV--PTVIVYTILIRGLCSD 230

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A+ +   M++  + PNV TYN+L+ G+C   +  +A  L+ +M+ +G+ P+VV+F
Sbjct: 231 NKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTF 290

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++++ LCK G+M  A  L   MI+  V PN  VYN+L+D +C  G V+ A  LF+ +E 
Sbjct: 291 GILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER 350

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +VF+YSILI G C     E A +++ +M  +GI  + V YN+L  G  +  ++++
Sbjct: 351 FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDK 410

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++  +M  +GV  +   + T IDG CK   +  A+ ++  + I     D+  Y  +ID
Sbjct: 411 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 470

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           G CK G +K A +L+  +    +  +  T + ++  LC DGK+  A +LF +
Sbjct: 471 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTE 522



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 196/365 (53%), Gaps = 9/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +++ K+   G    +   N L+  L +TG   +   ++EEM + NG       P+ +
Sbjct: 133 EALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWRIYEEMIS-NG-----LSPSVI 183

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+IDG C++G + +A+E+F +M+ + I P V+ Y  LI G C  N   EA+ +   M
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM 243

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV PNV ++N +M+  CK     +A RL + M+  G+ P+   +  L+DG C  G +
Sbjct: 244 REVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LFV+M       N+  Y+ LI+ YCK  ++  A++L+ E+    + PDV  Y+ L
Sbjct: 304 KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSIL 363

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + + E A  +F++M + G+ A++  Y + IDG CK G + +A+E+   +     
Sbjct: 364 IRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E ++  ++ LIDG CK   L+ A  ++  +    L  DVVTY  MI   C  G M +A  
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 362 LFLDM 366
           L+ DM
Sbjct: 484 LYSDM 488



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 177/353 (50%), Gaps = 11/353 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV  Y  LI  LC+      AL+++ ++    G    +   N + Y      L K G  
Sbjct: 115 PNV--YGELIIVLCKMELVEEALSMYHKV----GAALTIQACNVLLYV-----LVKTGRF 163

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           +    ++ +M    ++P+V+T+ +LI G C   D   A+ +F EM  +G+ P V+ + ++
Sbjct: 164 ELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTIL 223

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC + K++EA  +   M ++GV PN + YNTLMDG+C      +A  L+  M   G 
Sbjct: 224 IRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGL 283

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V ++ ILI+G CK  E++ A +L+  M+   + P++ +YN+L     ++  V  A  
Sbjct: 284 VPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMA 343

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF E++R  V+ D + Y   I GLC      EA  +F  +       +   YN LIDG C
Sbjct: 344 LFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCC 403

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G++  A E+   +    +  +V+T++ +I   C    +  A  ++ +M  K
Sbjct: 404 KEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIK 456



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 155/301 (51%), Gaps = 20/301 (6%)

Query: 1   MEAAA-LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+AA  LF+ +  F   PN+  YN+LI+  C+ G    A+ LF E+      F V   P+
Sbjct: 303 MKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE----RFEV--SPD 356

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY+ +I GLC     ++A  +F KM  E I  N VTYNSLI G C     ++A  +  
Sbjct: 357 VFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICS 416

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M + GV+PNV++F+ +++  CK   +  A  +   M+   + P+   Y  ++DG C  G
Sbjct: 417 QMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYG 476

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML----------SK 229
            +  A +L+  M   G   N ++ S L++G CK+ +I  AL L++E +          + 
Sbjct: 477 SMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAG 536

Query: 230 GIKPDV---VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           G KP +   V Y  L  GL +  Q  +A KLF +M+R+G+  D   Y   + GL +  YI
Sbjct: 537 GSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI 596

Query: 287 V 287
           +
Sbjct: 597 L 597



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 146/324 (45%), Gaps = 32/324 (9%)

Query: 49  NGEFGVVCKPNTVTYTTIIDGL--CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 106
           NG    V   +++T  ++I  +  C+  +  KA E F    ++NI      Y+++IH   
Sbjct: 16  NGTMLQVVSLSSLTPDSLITTVLNCRSPW--KALEFFNAAPEKNIQ----LYSAIIHVLV 69

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL----LELMIQIGVR 162
            +   + A+ L                N ++  L K+ K   A +L    L  +      
Sbjct: 70  GSKLLSHARYLL---------------NDLVQNLVKSHKPYHACQLAFSELSRLKSSKFT 114

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN  VY  L+   C   ++   EE       +G    + + ++L+    K    E    +
Sbjct: 115 PN--VYGELIIVLC---KMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRI 169

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           Y EM+S G+ P V+ + TL  G      + RA ++FDEM+  G+      Y   I GLC 
Sbjct: 170 YEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCS 229

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +  I EA  + R +R +    ++  YN L+DG CK    K A  L++ +    L+ DVVT
Sbjct: 230 DNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVT 289

Query: 343 YNIMIHALCADGKMDKARDLFLDM 366
           + I+I  LC  G+M  AR+LF++M
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNM 313



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 11/136 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-----MANGNGEFGVVC 56
           EA  L+  +   G  PN +T + L++GLC+ G    AL LF E         N + G   
Sbjct: 480 EALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAG-GS 538

Query: 57  KP---NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
           KP   N V YT +I GLC++G   KA +LF  M+   + P+ V Y  ++ G         
Sbjct: 539 KPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI-- 596

Query: 114 AKCLFIEMMDQGVQPN 129
              L  +M+  GV PN
Sbjct: 597 LMMLHADMLKFGVIPN 612



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 10/164 (6%)

Query: 213 NKEIEGALSLYSEML-----SKGIKPDVVIYNTLFIGLFEIHQVERAFKL-FDEMQRHGV 266
           N   E  + LYS ++     SK +     + N L   L + H+   A +L F E+ R   
Sbjct: 51  NAAPEKNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKPYHACQLAFSELSRLKS 110

Query: 267 AADTW-AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  T   Y   I  LCK   + EA+ ++  +      L I+A N L+  L K+GR ++ W
Sbjct: 111 SKFTPNVYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLW 167

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ++  +    L   V+T+  +I   C  G + +A+++F +M  K
Sbjct: 168 RIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVK 211


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/369 (36%), Positives = 208/369 (56%), Gaps = 7/369 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNT 60
           EA  LF  +   G EP+V TY+T+I+GLC+TG    AL  LF +M     E G  C  NT
Sbjct: 96  EAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMI----ERG--CSANT 149

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +I+GLCK+  +++A +L  +M  +   P+ +TYN+++ G C     +EAK  F  
Sbjct: 150 VAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDS 209

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+VV++N +++ L K GK DEA +L + +I  G  P+   YN+++ G      
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AEE+F  M + GC  N  +YSI+++G+C+ K+++ A  +  EM   G  PDVV YN 
Sbjct: 270 MDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNI 329

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL + + V++A +LF  M  +G A D  +Y   ++GLCK   + +A  LF  +   K
Sbjct: 330 LLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERK 389

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+  +N L+DGLCK+G+L  A +L   +       D V YN +++ L   G+  +A 
Sbjct: 390 LVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQAD 449

Query: 361 DLFLDMEAK 369
            L   M+ K
Sbjct: 450 RLTQAMKEK 458



 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 209/397 (52%), Gaps = 42/397 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF ++   G  P+   YN LI+G  + G    A  L+EEM +      V  +P+  TY +
Sbjct: 30  LFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVS------VGLEPSIYTYNS 83

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA-KCLFIEMMDQ 124
           +++  CKE  + +A ELF  M ++   P+VVTY+++I G C      EA + LF +M+++
Sbjct: 84  LLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIER 143

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G   N V++N ++N LCK+  ++ A +LLE M   G  P+   YNT++ G C  G+V+ A
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           ++ F SM S G   +V +Y+ L++   K  + + A+ L+ ++++KG  PD V YN++ +G
Sbjct: 204 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 263

Query: 245 LF-----------------------------------EIHQVERAFKLFDEMQRHGVAAD 269
           L                                       +V+ A K+ +EM + G   D
Sbjct: 264 LARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPD 323

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   +DGLCK   + +A ELF T+       DI +Y+ +++GLCK+ ++  A  LF 
Sbjct: 324 VVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFD 383

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +    L+ DVVT+NI++  LC  GK+D+A+DL   M
Sbjct: 384 RMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 174/347 (50%), Gaps = 36/347 (10%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C PN  T+  ++   CK+G +    +LF +M D  I+P+ + YN LI G+      +EA 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L+ EM+  G++P++ ++N ++N  CK  KM EA  L + M + G  P+   Y+T++ G 
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 176 CLTGRVNRA-EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           C TG+V  A E LF  M   GC  N  +Y+ LING CK++ IE A  L  EM SKG  PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
            + YNT+  GL  + +V  A + FD M   G + D  AY   +D L K G   EA++LF+
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL------PRGVL------------ 336
            +    Y  D   YN ++ GL +   +  A E+F+ +      P G              
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 337 -----------------IADVVTYNIMIHALCADGKMDKARDLFLDM 366
                            + DVVTYNI++  LC    +DKA +LF  M
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 350



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 142/244 (58%), Gaps = 1/244 (0%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            PN  +F V++   CK GK+ +  +L E M+  G+ P+   YN L+DG+   GRV+ A  
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           L+  M S+G + ++++Y+ L+N +CK  +++ A+ L+  M  KG +PDVV Y+T+  GL 
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 247 EIHQVERAFK-LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           +  +V  A + LF +M   G +A+T AY   I+GLCK+  I  A +L   +    Y  D 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN ++ GLC+ G++  A + F S+P      DVV YN ++ AL  +GK D+A  LF D
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244

Query: 366 MEAK 369
           + AK
Sbjct: 245 VIAK 248



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 157/336 (46%), Gaps = 76/336 (22%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF K+   GC  N   YN LINGLC+  +   A  L EEMA+     G V  P+ +TY T
Sbjct: 136 LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK----GYV--PDNITYNT 189

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVV----------------------------- 96
           I+ GLC+ G V +AK+ F  M     +P+VV                             
Sbjct: 190 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKG 249

Query: 97  ------TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                 TYNS++ G    ++ +EA+ +F +M+  G  PN  +++++++  C+  K+D+A 
Sbjct: 250 YMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAH 309

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           ++LE M +IG  P+   YN L+DG C T  V++A ELF +M   GC  ++ SYS+++NG 
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369

Query: 211 CKNKEIEGALSLYSEMLSK-----------------------------------GIKPDV 235
           CK  ++  A  L+  M+ +                                   G  PD 
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDY 429

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           V YNTL  GL +  +  +A +L   M+  G  +D +
Sbjct: 430 VAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 465



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 6/194 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+   GC PN  TY+ +++G CR      A  + EEM+    + G V  P+ V
Sbjct: 272 EAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMS----KIGAV--PDVV 325

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++DGLCK   VDKA ELF  M D    P++V+Y+ +++G C  N  ++A+ LF  M
Sbjct: 326 TYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRM 385

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+VV+FN++M+ LCK GK+DEA  LL+ M   G  P+   YNTLM+G    GR 
Sbjct: 386 IERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRH 445

Query: 182 NRAEELFVSMESMG 195
            +A+ L  +M+  G
Sbjct: 446 IQADRLTQAMKEKG 459


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 133/361 (36%), Positives = 199/361 (55%), Gaps = 19/361 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F  +R  G  PN++TYNT+++G C+  H   AL L+ EM  G+G       PN V
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEML-GDGLL-----PNVV 299

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +IDGLCK   +  A++  + M    + PN+  YN LI G+C A + +EA  L  E+
Sbjct: 300 TFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEI 359

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+V ++++++  LC   +M+EA  LL+ M + G  PNA  YNTL+DG+C  G +
Sbjct: 360 EKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNM 419

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E+   M   G + N+ ++S LI+GYCK  ++E A+ LY+EM+ KG+ PDVV Y  L
Sbjct: 420 EKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTAL 479

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF------RT 295
             G F+    + AF+L  EMQ  G+  + +     IDGLCK+G I +A++LF       T
Sbjct: 480 IDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDT 539

Query: 296 LRILKYELDIR-------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
                 ELD          Y  LI GLC  GR+  A + F  +    L  DV T  ++I 
Sbjct: 540 TGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQ 599

Query: 349 A 349
            
Sbjct: 600 G 600



 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 131/351 (37%), Positives = 189/351 (53%), Gaps = 6/351 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV TY TLI+G CR G  + A  LF+EM            P  V YT +I GLC E
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK------IFPTVVIYTILIRGLCGE 241

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A+ +F  M++  + PN+ TYN+++ G+C      +A  L+ EM+  G+ PNVV+F
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTF 301

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++++ LCK  +M  A + L  M   GV PN FVYN L+DG+C  G ++ A  L   +E 
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +VF+YSILI G C    +E A  L  EM  KG  P+ V YNTL  G  +   +E+
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++  +M   G+  +   + T IDG CK G +  A+ L+  + I     D+ AY  LID
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           G  K G  K A+ L + +    L  +V T + +I  LC DG++  A  LFL
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 193/367 (52%), Gaps = 11/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  ++ K+ V    P +   N +++GL + G       ++ +M A G         PN 
Sbjct: 144 EALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARG-------ASPNV 193

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+IDG C++G   KA  LF +M ++ I P VV Y  LI G C  +  +EA+ +F  
Sbjct: 194 VTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRT 253

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G+ PN+ ++N +M+  CK   + +A  L   M+  G+ PN   +  L+DG C T  
Sbjct: 254 MRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDE 313

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +  + M S G   N+F Y+ LI+GYCK   +  ALSL+SE+    I PDV  Y+ 
Sbjct: 314 MVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSI 373

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL  + ++E A  L  EM++ G   +   Y T IDG CK G + +A+E+   +    
Sbjct: 374 LIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E +I  ++ LIDG CK+G+++ A  L+  +    L+ DVV Y  +I     DG   +A 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 361 DLFLDME 367
            L  +M+
Sbjct: 494 RLHKEMQ 500



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 100/312 (32%), Positives = 163/312 (52%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P       ++DGL K+G  D   +++  M     +PNVVTY +LI G C   D+ +A  L
Sbjct: 156 PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRL 215

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM+++ + P VV + +++  LC   ++ EA  +   M   G+ PN + YNT+MDG+C 
Sbjct: 216 FDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCK 275

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              V +A EL+  M   G   NV ++ ILI+G CK  E+  A     +M S G+ P++ +
Sbjct: 276 IAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFV 335

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G  +   +  A  L  E+++H +  D + Y   I GLC    + EA  L + ++
Sbjct: 336 YNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMK 395

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              +  +   YN LIDG CK G ++ A E+   +    +  +++T++ +I   C  GKM+
Sbjct: 396 KKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKME 455

Query: 358 KARDLFLDMEAK 369
            A  L+ +M  K
Sbjct: 456 AAMGLYTEMVIK 467



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/334 (29%), Positives = 163/334 (48%), Gaps = 42/334 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE---------------- 44
           + A    + +  FG  PN+F YN LI+G C+ G+   AL+L  E                
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 45  ---------MANGNGEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                    M   +G    + K    PN VTY T+IDG CKEG ++KA E+  +M ++ I
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            PN++T+++LI G+C A     A  L+ EM+ +G+ P+VV++  +++   K+G   EA R
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS-------------MESMGCKH 198
           L + M + G+ PN F  + L+DG C  GR++ A +LF++             ++   C  
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N   Y+ LI G C +  I  A   +S+M   G++PDV     +  G F    +     L 
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQ 614

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            ++ + G+  ++  YR    G  ++GY+  A+  
Sbjct: 615 ADILKMGIIPNSSVYRVLAKGYEESGYLKSALSF 648



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 5/312 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN   +  +I    + G V++A  ++ KM   ++ P +   N ++ G      ++    +
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + +M+ +G  PNVV++  +++  C+ G   +A RL + MI+  + P   +Y  L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R++ AE +F +M + G   N+++Y+ +++GYCK   ++ AL LY EML  G+ P+VV 
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVT 300

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  L  GL +  ++  A K   +M   GV  + + Y   IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D+  Y+ LI GLC   R++ A  L + + +   + + VTYN +I   C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 358 KARDLFLDMEAK 369
           KA ++   M  K
Sbjct: 421 KAIEVCSQMTEK 432



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 179/390 (45%), Gaps = 43/390 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +++  G  PN  TYNTLI+G C+ G+   A+ +  +M     E G+  +PN +
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMT----EKGI--EPNII 439

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++T+IDG CK G ++ A  L+ +M  + + P+VV Y +LI G     +  EA  L  EM
Sbjct: 440 TFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEM 499

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV---------------RPNAF 166
            + G+ PNV + + +++ LCK+G++ +A +L   + + G                 PN  
Sbjct: 500 QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSLCSPNHV 557

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +Y  L+ G C  GR+ +A + F  M   G + +VF+  ++I G+ +   +   + L +++
Sbjct: 558 MYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADI 617

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE--MQRHGVAADTWAYRTFIDGL---- 280
           L  GI P+  +Y  L  G  E   ++ A     E       V ++ W   T         
Sbjct: 618 LKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQLCV 677

Query: 281 ------CKNGYIVE-AVELFRTLRILKYELDIRAYNCLID-----GLCKSGRLKIAWELF 328
                 C + Y+    +  F  L      L   + + ++      G     R   A +LF
Sbjct: 678 VTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPNKALQLF 737

Query: 329 RSLPRGVLIADVVTYNIMIHALCAD-GKMD 357
           R +       D+VT  + + A CAD G +D
Sbjct: 738 RQMQMDDXQPDIVTVTVALSA-CADLGALD 766



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/420 (23%), Positives = 162/420 (38%), Gaps = 76/420 (18%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPN+ T++TLI+G C+ G    A+ L+ EM       G++  P+ V YT +IDG  K+
Sbjct: 433 GIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIK----GLL--PDVVAYTALIDGHFKD 486

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI-------------E 120
           G   +A  L  +M++  ++PNV T + LI G C     ++A  LF+             E
Sbjct: 487 GNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNE 546

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +      PN V +  ++  LC +G++ +AS+    M   G+RP+ F    ++ G      
Sbjct: 547 LDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMH 606

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------------------ 222
           +     L   +  MG   N   Y +L  GY ++  ++ ALS                   
Sbjct: 607 LRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGS 666

Query: 223 -----------------------------------YSEMLSKGIKPDVVIYNTLFIGLFE 247
                                              Y   + K   P  ++    FIG   
Sbjct: 667 YTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKG 726

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             +  +A +LF +MQ      D       +      G +     +   +R    + D+  
Sbjct: 727 DQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCL 786

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            N LI+   K G +  A  LF     G    DV T+  MI      G+ ++A  LF +M+
Sbjct: 787 NNSLINMYSKCGEIGTARRLF----DGTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMK 842



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 30/190 (15%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G + ++   N+LIN   + G    A  LF+             K +  T+T++I G
Sbjct: 775 IRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQ----------KKDVTTWTSMIVG 824

Query: 70  LCKEGFVDKAKELFLKMKDEN----------------INPNVVTYNSLIHGFCYANDWNE 113
               G  ++A +LF +MK+ N                + PN VT+  ++    +A    E
Sbjct: 825 HALHGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEE 884

Query: 114 AKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
            K  F  M  D  ++P +  F  +++ LC+ G + EA    E ++++ VRPNA V+ TL+
Sbjct: 885 GKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLL 941

Query: 173 DGFCLTGRVN 182
               L G  N
Sbjct: 942 GACSLQGDSN 951



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 26/223 (11%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           N+A  LF +M     QP++V+  V ++     G +D    +   +   G+  +  + N+L
Sbjct: 731 NKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ +   G +  A  LF   +    K +V +++ +I G+  + + E AL L++EM     
Sbjct: 791 INMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMK---- 842

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
                          E ++  R  K   E +   V  +   +   +      G + E  +
Sbjct: 843 ---------------ETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQ 887

Query: 292 LFRTLRILKYELDIR--AYNCLIDGLCKSGRLKIAWELFRSLP 332
            FR+++   Y L  R   + C++D LC++G L  A+E    +P
Sbjct: 888 HFRSMK-EDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP 929


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 210/373 (56%), Gaps = 10/373 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F+ +   GC P+ F Y  LI GLC++G    A  L++E AN          P+ V
Sbjct: 130 EARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKE-ANARKHHATAV-PDVV 187

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENIN----PNVVTYNSLIHGFCYANDWNEAKCL 117
           TYT++IDGLCK G + +A+++F    DE +     P+ VTY S+I G C      E    
Sbjct: 188 TYTSLIDGLCKAGRILEARQVF---DDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM ++G +P+ V++  +++   K   + +A R+   M+Q G   +   YN ++DG C 
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCK 304

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GRV  A   F++ME  GC   V +YS L++G+C    +  A+ L+  ML +G +P++V 
Sbjct: 305 AGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVS 364

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEAVELFRTL 296
           YN +  GL    ++ +A+  F+++ +  +  D + +  F+ GLC+    + + VELF ++
Sbjct: 365 YNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESM 424

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++ +Y+ L+DG+C++G L++A E+FR +    +  DVV +N +I  LC  G++
Sbjct: 425 VSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRV 484

Query: 357 DKARDLFLDMEAK 369
           D+A ++F ++E +
Sbjct: 485 DEALEVFRELERR 497



 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/352 (34%), Positives = 193/352 (54%), Gaps = 7/352 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TY +LI+GLC+ G  + A  +F++ A   G       P+ VTYT+IIDGLCK G V
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFI-----PDAVTYTSIIDGLCKLGRV 238

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++  E F +M++    P+ VTY +LI GF  A    +A  ++ +M+  G   + V++N+I
Sbjct: 239 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 298

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK G++ EA      M + G       Y+ LMDGFC  G V+ A ELF  M   GC
Sbjct: 299 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 358

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE-IHQVERAF 255
           + N+ SY+I+I G C+  ++  A   + ++L + + PDV  +N    GL + +  V    
Sbjct: 359 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGV 418

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +LF+ M   G + +  +Y   +DG+C+ G +  A+E+FR +       D+  +N LI  L
Sbjct: 419 ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWL 478

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           C +GR+  A E+FR L R     D  +Y  ++  L    +M++AR L   M+
Sbjct: 479 CIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMK 529



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 188/359 (52%), Gaps = 15/359 (4%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P++  +  +INGLCR      A ++ E            C+P+ VTY   IDGLCK  
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAG------CEPDYVTYNVFIDGLCKAE 56

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD A +L  KM ++   P  VTY +L+ G   A   +EA  +  +M+++G  P + ++ 
Sbjct: 57  RVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYT 116

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           V+++ L K G+++EA R+   M+  G RP+AFVY  L+ G C +G+   A  L+   E+ 
Sbjct: 117 VVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALY--KEAN 174

Query: 195 GCKH------NVFSYSILINGYCKNKEIEGALSLY-SEMLSKGIKPDVVIYNTLFIGLFE 247
             KH      +V +Y+ LI+G CK   I  A  ++  E + +G  PD V Y ++  GL +
Sbjct: 175 ARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCK 234

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           + +VE   + F EM+  G   D   Y   IDG  K   I +A  ++R +      +    
Sbjct: 235 LGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVT 294

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           YN ++DGLCK+GR+  A+  F ++     +A VVTY+ ++   C++G +  A +LF  M
Sbjct: 295 YNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRM 353



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 123/400 (30%), Positives = 191/400 (47%), Gaps = 48/400 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++  +    GCEP+  TYN  I+GLC+      A  L ++M          C P TV
Sbjct: 25  EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK------CLPTTV 78

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGL K G +D+A  +  +M ++  +P + TY  +I G   A    EA+ +F++M
Sbjct: 79  TYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 138

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDE--------------------------------- 148
           +  G +P+   +  ++  LCK+GK +E                                 
Sbjct: 139 LGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCK 198

Query: 149 ASRLLEL-------MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           A R+LE         ++ G  P+A  Y +++DG C  GRV    E F  M + G + +  
Sbjct: 199 AGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 258

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+G+ K K I  A  +Y +ML  G     V YN +  GL +  +V  A+  F  M
Sbjct: 259 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAM 318

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           +  G  A    Y   +DG C  G +  AVELFR +     E ++ +YN +I GLC++G+L
Sbjct: 319 EERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKL 378

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             A+  F  L +  L  DV T+N  +H LC   ++D   D
Sbjct: 379 AKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQ--RLDTVSD 416



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 5/319 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C P+ V +T +I+GLC+E  +D+A  +  +       P+ VTYN  I G C A   ++A 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M ++   P  V++  +++ L K G++DEA  +LE M++ G  P    Y  ++DG 
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----GI 231
              GRV  A  +FV M   GC+ + F Y+ LI G CK+ + E A +LY E  ++      
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLF-DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            PDVV Y +L  GL +  ++  A ++F DE    G   D   Y + IDGLCK G + E  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           E F  +R   YE D   Y  LIDG  K+  +  A  ++R + +   +   VTYNI++  L
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 351 CADGKMDKARDLFLDMEAK 369
           C  G++ +A   FL ME +
Sbjct: 303 CKAGRVAEAYATFLAMEER 321



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 12/206 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   GCEPN+ +YN +I GLCR G    A   FE++         +C P+  T
Sbjct: 346 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR-----LC-PDVYT 399

Query: 63  YTTIIDGLCKE-GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +   + GLC+    V    ELF  M  +  +PN+ +Y+ L+ G C A     A  +F EM
Sbjct: 400 FNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREM 459

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR--PNAFVYNTLMDGFCLTG 179
           + +GV P+VV FN ++  LC  G++DEA   LE+  ++  R  P+A+ Y +L+DG     
Sbjct: 460 VSRGVAPDVVVFNTLIRWLCIAGRVDEA---LEVFRELERRSAPDAWSYWSLLDGLSRCE 516

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSI 205
           R+  A  L   M+  GC    +  ++
Sbjct: 517 RMEEARLLSFHMKLQGCAPRHYDLTV 542



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 88/176 (50%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           M C  ++ +++++ING C+ K ++ A S+    +  G +PD V YN    GL +  +V+ 
Sbjct: 1   MPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDD 60

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF+L  +M        T  Y   +DGL K G + EA+ +   +        ++ Y  +ID
Sbjct: 61  AFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVID 120

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL K+GR++ A  +F  +       D   Y  +I  LC  GK ++A  L+ +  A+
Sbjct: 121 GLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANAR 176


>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
 gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
 gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 523

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 131/359 (36%), Positives = 201/359 (55%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G  P++ T  +L+NG C+      A++L + M      FG V  PN V Y T+I+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG----FGFV--PNVVIYNTVIN 192

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLCK   ++ A E+F  M+ + I  + VTYN+LI G   +  W +A  L  +M+ + + P
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NV+ F  +++   K G + EA  L + MI+  V PN F YN+L++GFC+ G +  A+ +F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M S GC  +V +Y+ LI G+CK+K +E  + L+ EM  +G+  D   YNTL  G  + 
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A K+F+ M   GV+ D   Y   +D LC NG I +A+ +   L+  + ++DI  Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           N +I GLC++ +LK AW LFRSL R  +  D + Y  MI  LC  G   +A  L   M+
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 191/364 (52%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ K+   G   +++++  LI+  CR     +AL L  +M     + G   +P+ VT  +
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGS 154

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++G C+     +A  L   M      PNVV YN++I+G C   D N A  +F  M  +G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ + V++N +++ L  +G+  +A+RLL  M++  + PN   +  L+D F   G +  A 
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L+  M       NVF+Y+ LING+C +  +  A  ++  M+SKG  PDVV YNTL  G 
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +VE   KLF EM   G+  D + Y T I G C+ G +  A ++F  +       DI
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN L+D LC +G+++ A  +   L +  +  D++TYNI+I  LC   K+ +A  LF  
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454

Query: 366 MEAK 369
           +  K
Sbjct: 455 LTRK 458



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/330 (34%), Positives = 176/330 (53%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L   +  FG  PNV  YNT+INGLC+      AL +F  M       G+  + + V
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK----GI--RADAV 220

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GL   G    A  L   M    I+PNV+ + +LI  F    +  EA+ L+ EM
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PNV ++N ++N  C +G + +A  + +LM+  G  P+   YNTL+ GFC + RV
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M   G   + F+Y+ LI+GYC+  ++  A  +++ M+  G+ PD+V YN L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    ++E+A  + +++Q+  +  D   Y   I GLC+   + EA  LFR+L     
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           + D  AY  +I GLC+ G  + A +L R +
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRM 490



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 164/295 (55%), Gaps = 6/295 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G   +  TYNTLI+GL  +G    A  L  +M     +      PN + 
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID------PNVIF 256

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T +ID   KEG + +A+ L+ +M   ++ PNV TYNSLI+GFC      +AK +F  M+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+VV++N ++   CK+ ++++  +L   M   G+  +AF YNTL+ G+C  G++N
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+++F  M   G   ++ +Y+IL++  C N +IE AL +  ++    +  D++ YN + 
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            GL    +++ A+ LF  + R GV  D  AY T I GLC+ G   EA +L R ++
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/306 (29%), Positives = 157/306 (51%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V +T ++  + K    D    L+ KM++  I+ ++ ++  LIH FC  +  + A  L
Sbjct: 77  PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +MM  G +P++V+   ++N  C+  +  EA  L++ M   G  PN  +YNT+++G C 
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              +N A E+F  ME  G + +  +Y+ LI+G   +     A  L  +M+ + I P+V+ 
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  L     +   +  A  L+ EM R  V  + + Y + I+G C +G + +A  +F  + 
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN LI G CKS R++   +LF  +    L+ D  TYN +IH  C  GK++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376

Query: 358 KARDLF 363
            A+ +F
Sbjct: 377 VAQKVF 382



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 10/294 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA L   +     +PNV  +  LI+   + G+ + A NL++EM   +    VV  PN  
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS----VV--PNVF 290

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+G C  G +  AK +F  M  +   P+VVTYN+LI GFC +    +   LF EM
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  +  ++N +++  C+ GK++ A ++   M+  GV P+   YN L+D  C  G++
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +   ++      ++ +Y+I+I G C+  +++ A  L+  +  KG+KPD + Y T+
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 470

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             GL        A KL   M+  G       Y    D   ++ Y   + EL + 
Sbjct: 471 ISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLSAELIKA 520



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 6/239 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++      PNVFTYN+LING C  G    A  +F+ M +        C P+ 
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDV 324

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I G CK   V+   +LF +M  + +  +  TYN+LIHG+C A   N A+ +F  
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D GV P++V++N++++ LC NGK+++A  ++E + +  +  +   YN ++ G C T +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +  A  LF S+   G K +  +Y  +I+G C+      A  L   M   G  P   IY+
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 131/259 (50%)

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
           +++A  LF EM+     P++V F  ++  + K  K D    L   M  +G+  + + +  
Sbjct: 60  FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+  FC   R++ A  L   M  +G + ++ +   L+NG+C+    + A+SL   M   G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             P+VVIYNT+  GL +   +  A ++F  M++ G+ AD   Y T I GL  +G   +A 
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            L R +   K + ++  +  LID   K G L  A  L++ + R  ++ +V TYN +I+  
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299

Query: 351 CADGKMDKARDLFLDMEAK 369
           C  G +  A+ +F  M +K
Sbjct: 300 CIHGCLGDAKYMFDLMVSK 318


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  234 bits (596), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 203/355 (57%), Gaps = 8/355 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+V TY+T+I+GLC+TG    AL + EEM     E GV   P+  TYT I+D LC+ 
Sbjct: 5   GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMT----EKGV--NPDVATYTIIVDRLCRA 58

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD+A ELF KM +   + N V YN+LI+G C   +   A  L  EM  +G +P+ +++
Sbjct: 59  GKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++ LC+ GK+ EA +  + M   G  P+   YN L+D     G+V  A  LF +M+ 
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178

Query: 194 MGCK--HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              K   ++ +Y+ LI+G+C+ ++ + A+ L+ ++++KG  PD V YN++ +GL     +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           + A ++F +M   G A +   Y   + G C+ G +   +EL+  +   ++  D+   N +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ID LCK+ ++  A ++   + +   + DVVTYNI++  LC    +DKA +LF  M
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTM 353



 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 198/399 (49%), Gaps = 43/399 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   GC  N   YN LINGLC+  +   A  L EEMA+   E      P+ +
Sbjct: 63  EADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYE------PDNI 116

Query: 62  TYTTIIDGLCKEGFVDKAKELF-------------------------------------L 84
           TY TI+ GLC+ G V +AK+ F                                     +
Sbjct: 117 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTM 176

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
            M D  + P+++TYN+LI GFC     +EA  LF +++ +G  P+ V++N I+  L +  
Sbjct: 177 DMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKS 236

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            MDEA  + + M+  G  PN   Y+ ++ G C  G + R  EL+  M       +V   +
Sbjct: 237 NMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCN 296

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +I+  CK K+++ A  +  EM   G  PDVV YN L  GL + + V++A +LF  M  +
Sbjct: 297 AVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDN 356

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G A D  +Y   ++GLCK   + +A  LF  +   K   D+  +N L+DGLCK+G+L  A
Sbjct: 357 GCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEA 416

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +L   +    ++ D VT   ++H LC D + D+A  LF
Sbjct: 417 KDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLF 455



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 95/248 (38%), Positives = 142/248 (57%), Gaps = 2/248 (0%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +P+VV+++ I++ LCK GK+ EA  ++E M + GV P+   Y  ++D  C  G+
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A+ELF  M   GC  N  +Y+ LING CK++ IE A  L  EM SKG +PD + YNT
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL- 299
           +  GL  + +V  A + FD M   G + D  AY   +D L K G + EA  LF+T+ +  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 300 -KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            K   D+  YN LIDG C+  +   A +LF+ +     + D VTYN ++  L     MD+
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 359 ARDLFLDM 366
           A ++F  M
Sbjct: 241 AEEMFKKM 248



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 189/370 (51%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +   G  P+  TYN+++ GL R  +   A  +F++M +        C PN  
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSG------CAPNGA 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ ++ G C+ G + +  EL+ +M ++  +P+V+  N++I   C A   ++A  +  EM
Sbjct: 259 TYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEM 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VV++N++++ LCK   +D+A  L   M+  G  P+   Y+ +++G C T +V
Sbjct: 319 SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKV 378

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M       +V +++IL++G CK  +++ A  L   M    + PD V   TL
Sbjct: 379 HDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL--RIL 299
             GL    + + A +LF  M   G  AD   +   + GLC+ G + +A+  F+++     
Sbjct: 439 MHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDG 498

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++  D+  Y  L++ L ++GR+  A + F+ +       D V YN +++ L   G+  +A
Sbjct: 499 EFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQA 558

Query: 360 RDLFLDMEAK 369
             L   M+ K
Sbjct: 559 DRLTQAMKEK 568



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 151/286 (52%), Gaps = 2/286 (0%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M ++   P+VVTY+++I G C      EA  +  EM ++GV P+V ++ +I++ LC+ GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +DEA  L   MI+ G   N   YN L++G C    + RA +L   M S G + +  +Y+ 
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD--EMQR 263
           +++G C+  ++  A   +  M S+G  PDVV YN L   L++  +V  A+ LF   +M  
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
             VA D   Y T IDG C+     EA++LF+ +    Y  D   YN ++ GL +   +  
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A E+F+ +       +  TY+I++   C  G M +  +L+ +M  K
Sbjct: 241 AEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEK 286



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 158/336 (47%), Gaps = 66/336 (19%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEF 52
           EA  +F K+   GC PN  TY+ +++G CR G+    L L+EEM            N   
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299

Query: 53  GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            ++CK                    P+ VTY  ++DGLCK   VDKA ELF  M D    
Sbjct: 300 DMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 359

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++V+Y+ +++G C  N  ++A+ LF  M+++ + P+VV+FN++M+ LCK GK+DEA  L
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 419

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L++M +  V P+     TLM G C   R + A  LF  M   G   +V  ++I++ G C+
Sbjct: 420 LDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCR 479

Query: 213 NKE-------------------------------------IEGALSLYSEMLSKGIKPDV 235
             +                                     ++ A+  + +M   G  PD 
Sbjct: 480 EGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDY 539

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           V YNTL  GL +  +  +A +L   M+  G  +D +
Sbjct: 540 VAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDCF 575


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  233 bits (595), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 195/346 (56%), Gaps = 7/346 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+ FTY +LI G C+      A  +F+EM          C+ N V YT +I GLC E
Sbjct: 248 GLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKG------CRRNEVAYTHLIHGLCVE 301

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A +LF+KMKD++  P V TY  LI   C +   +EA  L  EM ++G++PN+ ++
Sbjct: 302 RRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTY 361

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            V+++ LC   K+++A  LL  M++ G+ PN   YN L++G+C  G +  A ++   MES
Sbjct: 362 TVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMES 421

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              + N  +Y+ LI GYCK + +  A+ + ++ML + + PDVV YN+L  G       + 
Sbjct: 422 RNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDS 480

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A++L   M   G+  D W Y + ID LCK+  + EA +LF +L       ++  Y  LID
Sbjct: 481 AYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALID 540

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           G CK+G++  A  +   +     + + +T+N +IH LC DGK+ +A
Sbjct: 541 GYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEA 586



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 187/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   ++M++      PN++TYN ++NG C+ G+   A N +  M    G       P+  
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEA-NQYVSMIVEAG-----LDPDFF 254

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I G C+   +D A ++F +M  +    N V Y  LIHG C     +EA  LF++M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKM 314

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P V ++ V++  LC + +  EA  L++ M + G++PN   Y  L+D  C   ++
Sbjct: 315 KDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKL 374

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A EL   M   G   NV +Y+ LINGYCK   IE AL +   M S+ ++P+   YN L
Sbjct: 375 EKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNEL 434

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V +A  + ++M    V  D   Y + IDG C++G    A  L   +     
Sbjct: 435 IKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGL 493

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y  +ID LCKS R++ A +LF SL +  +I +VV Y  +I   C  GK+++A  
Sbjct: 494 VPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHL 553

Query: 362 LFLDMEAK 369
           +   M +K
Sbjct: 554 MLEKMLSK 561



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 185/366 (50%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF+K++   C P V TY  LI  LC +     ALNL +EM     E G+  KPN  
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME----EKGI--KPNIH 359

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +ID LC +  ++KA+EL  +M ++ + PNV+TYN+LI+G+C      +A  +   M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++PN  ++N ++   CK   + +A  +L  M++  V P+   YN+L+DG C +G  
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   + ++Y+ +I+  CK+K +E A  L+  +  K + P+VV+Y  L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +V  A  + ++M       ++  +   I GLC +G + EA  L   +  +  
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +     LI  L K G    A+  F+ +       D  TY   I   C +G++  A D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658

Query: 362 LFLDME 367
           +   M+
Sbjct: 659 MVAKMK 664



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 182/364 (50%), Gaps = 7/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++ + GC  N   Y  LI+GLC       A++LF +M + +      C P   T
Sbjct: 272 AFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDD------CYPTVRT 325

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I  LC      +A  L  +M+++ I PN+ TY  LI   C      +A+ L  +M+
Sbjct: 326 YTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQML 385

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ PNV+++N ++N  CK G +++A  ++ELM    +RPN   YN L+ G+C    V+
Sbjct: 386 EKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYC-KRNVH 444

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  +   M       +V +Y+ LI+G C++   + A  L S M  +G+ PD   Y ++ 
Sbjct: 445 KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMI 504

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  +VE A  LFD +++  V  +   Y   IDG CK G + EA  +   +      
Sbjct: 505 DSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCL 564

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   +N LI GLC  G+LK A  L   + +  L   V T  I+IH L  DG  D A   
Sbjct: 565 PNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRR 624

Query: 363 FLDM 366
           F  M
Sbjct: 625 FQQM 628



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 171/330 (51%), Gaps = 7/330 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV TYN LING C+ G    AL++ E M + N       +PNT 
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRN------LRPNTR 429

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G CK   V KA  +  KM +  + P+VVTYNSLI G C + +++ A  L   M
Sbjct: 430 TYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P+  ++  +++ LCK+ +++EA  L + + Q  V PN  +Y  L+DG+C  G+V
Sbjct: 489 NDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKV 548

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  +   M S  C  N  +++ LI+G C + +++ A  L  +M+   ++P V     L
Sbjct: 549 NEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTIL 608

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +    + A++ F +M   G   D   Y TFI   C+ G + +A ++   ++    
Sbjct: 609 IHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGV 668

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
             D+  Y+ LI G    GR   A+ + + +
Sbjct: 669 SPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 175/346 (50%), Gaps = 3/346 (0%)

Query: 19  VFTYNTLINGLCRT-GHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           VF    L+   C +   T+  L+L  +M N +  F +  K     Y T+++ L + G VD
Sbjct: 142 VFKIRLLMIKSCDSVADTLFVLDLCRKM-NKDESFELKYKLIIGCYNTLLNSLARFGLVD 200

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           + K+++++M ++ + PN+ TYN +++G+C   +  EA      +++ G+ P+  ++  ++
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLI 260

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
              C+   +D A ++ + M   G R N   Y  L+ G C+  R++ A +LFV M+   C 
Sbjct: 261 MGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCY 320

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             V +Y++LI   C ++    AL+L  EM  KGIKP++  Y  L   L    ++E+A +L
Sbjct: 321 PTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKAREL 380

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             +M   G+  +   Y   I+G CK G I +A+++   +       + R YN LI G CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCK 440

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
               K    L + L R VL  DVVTYN +I   C  G  D A  L 
Sbjct: 441 RNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDSAYRLL 485



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 188/370 (50%), Gaps = 27/370 (7%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYN+LI+G CR+G+   A  L   M     + G+V  P+  TYT++ID LCK   V
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLM----NDRGLV--PDPWTYTSMIDSLCKSKRV 513

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A +LF  ++ +++ PNVV Y +LI G+C A   NEA  +  +M+ +   PN ++FN +
Sbjct: 514 EEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNAL 573

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC +GK+ EA+ L E M++I ++P       L+      G  + A   F  M S G 
Sbjct: 574 IHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGT 633

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +  +Y+  I  YC+   ++ A  + ++M   G+ PD+  Y++L  G  ++ +   AF 
Sbjct: 634 KPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFV 693

Query: 257 LFDEMQRHGVAADTWAYRTFI---------------DGLCKNGYIVE---AVELFRTLRI 298
           +   M   G       + + I                G+C    ++E    VEL   +  
Sbjct: 694 VLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVE 753

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKM 356
                + ++Y  L+ G+C+ G L++A ++F  + +  G+  +++V +N ++   C   K 
Sbjct: 754 HGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELV-FNALLSCCCKLEKH 812

Query: 357 DKARDLFLDM 366
           ++A  +  DM
Sbjct: 813 NEAAKVVDDM 822



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 175/385 (45%), Gaps = 25/385 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  L      PNV  Y  LI+G C+ G    A  + E+M + N      C PN++
Sbjct: 515 EACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKN------CLPNSL 568

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I GLC +G + +A  L  KM   ++ P V T   LIH      D++ A   F +M
Sbjct: 569 TFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQM 628

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +P+  ++   +   C+ G++ +A  ++  M + GV P+ F Y++L+ G+   GR 
Sbjct: 629 LSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRT 688

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNK------------------EIEGALSLY 223
           N A  +   M   GC+ +  ++  LI    + K                  E +  + L 
Sbjct: 689 NSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELL 748

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCK 282
            +M+  G+ P+   Y  L +G+ EI  +  A K+FD MQ + G++     +   +   CK
Sbjct: 749 EKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCK 808

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
                EA ++   +  + +   + +   LI  L K G  +    +F++L +     D + 
Sbjct: 809 LEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELA 868

Query: 343 YNIMIHALCADGKMDKARDLFLDME 367
           + I+I  +   G ++   +LF  ME
Sbjct: 869 WKIIIDGVGKQGLVEAFYELFNVME 893



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 158/361 (43%), Gaps = 48/361 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA  +  K+    C PN  T+N LI+GLC  G    A  L E+M                
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILI 609

Query: 48  ----GNGEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                +G+F               KP+  TYTT I   C+EG +  A+++  KMK+  ++
Sbjct: 610 HRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVS 669

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC--KNGKM---- 146
           P++ TY+SLI G+      N A  +   M D G +P+  +F  ++  L   K GK+    
Sbjct: 670 PDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGE 729

Query: 147 ------------DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
                       D    LLE M++ GV PNA  Y  LM G C  G +  AE++F  M+  
Sbjct: 730 PGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQK 789

Query: 195 -GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +   ++ L++  CK ++   A  +  +M+  G  P +     L   L++  + ER
Sbjct: 790 EGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKER 849

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              +F  + + G   D  A++  IDG+ K G +    ELF  +         + Y+ LI+
Sbjct: 850 GTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909

Query: 314 G 314
           G
Sbjct: 910 G 910



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 121/237 (51%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++N L + G +DE  ++   M++  V PN + YN +++G+C  G V  A +    + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIV 245

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   + F+Y+ LI GYC+ K+++ A  ++ EM  KG + + V Y  L  GL    +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRID 305

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  LF +M+          Y   I  LC +    EA+ L + +     + +I  Y  LI
Sbjct: 306 EAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLI 365

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D LC   +L+ A EL   +    L+ +V+TYN +I+  C  G ++ A D+   ME++
Sbjct: 366 DSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESR 422


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 196/368 (53%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  P+   YNT+I GLC  G    AL  + +M          C P+ +
Sbjct: 51  QAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-------CAPSVI 103

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D LCK   +  A  +   M +    PNVVTYN+LI+GFC   + +EA  LF +M
Sbjct: 104 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 163

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++    P+V ++N++++  CK  +  + ++LL+ M++ G  PN   YNTLMD    +G+ 
Sbjct: 164 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 223

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M    CK + F+++++I+ +CK  +++ A  L+  M  +G  PD+  YN +
Sbjct: 224 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM 283

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G    ++++ A +L + M   G   D   Y + + GLCK   + EA E++  LR   Y
Sbjct: 284 ISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 343

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD+   + LIDGLCKS RL  A +L R + R     DVV Y I+IH  C   ++DK+  
Sbjct: 344 FLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLA 403

Query: 362 LFLDMEAK 369
            F +M  K
Sbjct: 404 FFSEMLDK 411



 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 191/342 (55%), Gaps = 6/342 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  L++ LC++     A  + E+M          C PN VTY T+I+G CK G
Sbjct: 98  CAPSVITYTILVDALCKSARISDASLILEDMIEAG------CAPNVVTYNTLINGFCKLG 151

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A  LF +M + + +P+V TYN LI G+C      +   L  EM+  G +PN +++N
Sbjct: 152 NMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYN 211

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +M+ L K+GK  +A  L ++M++   +P+ F +N ++D FC  G+++ A ELF  M   
Sbjct: 212 TLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDR 271

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++++Y+I+I+G C+   I+ A  L   M   G  PDVV YN++  GL +  QV+ A
Sbjct: 272 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           +++++ ++  G   D     T IDGLCK+  + +A +L R +       D+ AY  LI G
Sbjct: 332 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHG 391

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            CK+ +L  +   F  +     +  V+TY+I+I  LC   ++
Sbjct: 392 FCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARV 433



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/265 (36%), Positives = 151/265 (56%), Gaps = 6/265 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           + A L  ++  +GCEPN  TYNTL++ L ++G  I A NL + M   +      CKP+  
Sbjct: 190 DGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD------CKPSHF 243

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID  CK G +D A ELF  M D    P++ TYN +I G C AN  ++A+ L   M
Sbjct: 244 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 303

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P+VV++N I++ LCK  ++DEA  + E++   G   +    +TL+DG C + R+
Sbjct: 304 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 363

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + AE+L   ME  G   +V +Y+ILI+G+CK  +++ +L+ +SEML KG  P V+ Y+ +
Sbjct: 364 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 423

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
              L +  +V     L   M   GV
Sbjct: 424 IDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 154/295 (52%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++    C P+VFTYN LI+G C+         L +EM     ++G  C+PN +
Sbjct: 155 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMV----KYG--CEPNFI 208

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D L K G    A  L   M   +  P+  T+N +I  FC     + A  LF  M
Sbjct: 209 TYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLM 268

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P++ ++N++++  C+  ++D+A +LLE M + G  P+   YN+++ G C   +V
Sbjct: 269 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQV 328

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E++  + + G   +V + S LI+G CK++ ++ A  L  EM   G  PDVV Y  L
Sbjct: 329 DEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 388

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             G  +  Q++++   F EM   G       Y   ID LCK+  + +   L +T+
Sbjct: 389 IHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTM 443



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 140/302 (46%), Gaps = 34/302 (11%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           N L+  F       EA  LF   +     P+ ++++ ++N  CK     +A RLL+ M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME-------------------------- 192
            G+ P+  VYNT++ G C  GRV+ A   +  M+                          
Sbjct: 62  RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRHCAPSVITYTILVDALCKSARISDA 121

Query: 193 --------SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
                     GC  NV +Y+ LING+CK   ++ A+ L+++ML     PDV  YN L  G
Sbjct: 122 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  + +   KL  EM ++G   +   Y T +D L K+G  ++A  L + +     +  
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              +N +ID  CK G+L +A+ELF+ +     + D+ TYNIMI   C   ++D AR L  
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 365 DM 366
            M
Sbjct: 302 RM 303


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 197/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F  +   GC PNVF+Y+ LI GLCR      A  L  EM +G  +      PN V
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ------PNVV 123

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++ GLCK G + +A +LF +M      P+ V YN LI GF    D  EA  LF EM
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P V ++N +++   + G+      L + M++ G  PN F +N L+DGFC  G +
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF+ M S+GC  +V SY+ LI G C   +   A  L  EM+  G+ PD+V YN L
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A KLF E+ + G+  D ++Y T ID LC+ G +  A  +F+ +     
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D      L+ GLC+  RL  + ELF+++ +   +  +  YN++++ LC   + D   +
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423

Query: 362 LFLDMEAK 369
           +F ++  +
Sbjct: 424 IFHELTER 431



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/353 (35%), Positives = 187/353 (52%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN +TY  L+  LC+      A ++F  MA         C PN  +Y+ +I GLC+ 
Sbjct: 47  GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG------CSPNVFSYSILIAGLCRG 100

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A EL  +M D    PNVVTY SL+ G C      EA  LF  M+ +G  P+ V +
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           NV+++   K G M EA RL E M++ G  P  F YN+L+ GF   G   R + LF  M  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  N+F+++ L++G+CK  ++  A  L+ EM S G  PDVV YNTL  G+    +   
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHE 280

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L  EM R GV  D  +Y   IDG  K+G +  A++LF  +     E D  +Y+ +ID
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LC++G++  A+ +F+ +       D      ++  LC   ++ ++ +LF  M
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 123/351 (35%), Positives = 181/351 (51%), Gaps = 6/351 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
              +YN L+  L ++G        + +M          C PNT TY  ++  LC+    +
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDM------LAAGCVPNTYTYGYLLRSLCQAQRFE 69

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+ +F  M  +  +PNV +Y+ LI G C     +EA  L  EM+D G QPNVV++  ++
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + LCK GK+ EA  L   M+  G  P+  VYN L+DGF   G +  A  LF  M   GC 
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             VF+Y+ L++G+ +  E     SL+ +ML +G  P++  +N L  G  ++  +  A +L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F EM+  G   D  +Y T I G+C  G   EA  L R +       DI +YN LIDG  K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           SG L  A +LF  +P+  L  D  +Y+ +I  LC  GK+  A  +F DM A
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 147/279 (52%), Gaps = 6/279 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   GC P VFTYN+L++G  R G      +LF++M          C PN  
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG------CVPNIF 228

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++DG CK G + +A  LFL+M+     P+VV+YN+LI G C     +EA+ L  EM
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREM 288

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P++VS+N++++   K+G +D A +L   + + G+ P+AF Y+T++D  C  G+V
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M + G   +      L+ G C+ + +  +  L+  M+     P +  YN L
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
              L +  + +   ++F E+   G + D    +  ++ L
Sbjct: 409 MYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 35/310 (11%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           N   ++YN L+     +   +     + +M+  G  PN  ++  ++  LC+  + +EA  
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +   M   G  PN F Y+ L+ G C   +V+ A EL   M   G + NV +Y  L++G C
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE----------- 260
           K  +++ A+ L+S M+ +G  PD V+YN L  G  +   +  A++LF+E           
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 261 ------------------------MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
                                   M R G   + + +   +DG CK G +VEA  LF  +
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R L    D+ +YN LI G+C  G+   A  L R + R  +  D+V+YNI+I      G +
Sbjct: 254 RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313

Query: 357 DKARDLFLDM 366
           D A  LF ++
Sbjct: 314 DHAIKLFYEI 323



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 99/209 (47%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q+        YN L++    +GR +     +  M + GC  N ++Y  L+   C+ +  E
Sbjct: 10  QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFE 69

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A S++  M ++G  P+V  Y+ L  GL    +V+ A +L +EM   G   +   Y + +
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            GLCK G + EAV+LF  +       D   YN LIDG  K G +  A+ LF  +     I
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
             V TYN ++      G+  + + LF DM
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 98/200 (49%), Gaps = 6/200 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF+++R  GC P+V +YNTLI G+C  G    A  L  EM       GV   P+ 
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRS----GV--GPDI 297

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y  +IDG  K G +D A +LF ++    + P+  +Y+++I   C A     A  +F +
Sbjct: 298 VSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKD 357

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  P+      ++  LC+  ++ E+  L + M++    P    YN LM   C   R
Sbjct: 358 MIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKR 417

Query: 181 VNRAEELFVSMESMGCKHNV 200
            +   E+F  +   G   +V
Sbjct: 418 SDDVCEIFHELTERGFSPDV 437



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 81/172 (47%)

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
           H   SY+ L+    K+   +     Y++ML+ G  P+   Y  L   L +  + E A  +
Sbjct: 15  HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M   G + + ++Y   I GLC+   + EA EL   +    ++ ++  Y  L+ GLCK
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G+LK A +LF  +       D V YN++I      G M +A  LF +M  K
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/351 (37%), Positives = 189/351 (53%), Gaps = 6/351 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV TY TLI+G CR G  + A  LF+EM            P  V YT +I GLC E
Sbjct: 188 GASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK------IFPTVVIYTILIRGLCGE 241

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A+ +F  M++  + PN+ TYN+++ G+C      +A  L+ EM+  G+ PNVV+F
Sbjct: 242 SRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTF 301

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++++ LCK  +M  A + L  M   GV PN FVYN L+DG+C  G ++ A  L   +E 
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +VF+YSILI G C    +E A  L  EM  KG  P+ V YNTL  G  +   +E+
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++  +M   G+  +   + T IDG CK G +  A+ L+  + I     D+ AY  LID
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           G  K G  K A+ L + +    L  +V T + +I  LC DG++  A  LFL
Sbjct: 482 GHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFL 532



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 192/366 (52%), Gaps = 9/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  ++ K+ V    P +   N +++GL + G       ++ +M            PN V
Sbjct: 144 EALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGAS------PNVV 194

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG C++G   KA  LF +M ++ I P VV Y  LI G C  +  +EA+ +F  M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN+ ++N +M+  CK   + +A  L + M+  G+ PN   +  L+DG C T  +
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +  + M S G   N+F Y+ LI+GYCK   +  ALSL+SE+    I PDV  Y+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + ++E A  L  EM++ G   +   Y T IDG CK G + +A+E+   +     
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E +I  ++ LIDG CK+G+++ A  L+  +    L+ DVV Y  +I     DG   +A  
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 362 LFLDME 367
           L  +M+
Sbjct: 495 LHKEMQ 500



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 162/304 (53%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++DGL K+G  D   +++  M     +PNVVTY +LI G C   D+ +A  LF EM+++ 
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P VV + +++  LC   ++ EA  +   M   G+ PN + YNT+MDG+C    V +A 
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           EL+  M   G   NV ++ ILI+G CK  E+  A     +M S G+ P++ +YN L  G 
Sbjct: 284 ELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGY 343

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   +  A  L  E+++H +  D + Y   I GLC    + EA  L + ++   +  + 
Sbjct: 344 CKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNA 403

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN LIDG CK G ++ A E+   +    +  +++T++ +I   C  GKM+ A  L+ +
Sbjct: 404 VTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTE 463

Query: 366 MEAK 369
           M  K
Sbjct: 464 MVIK 467



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 5/312 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN   +  +I    + G V++A  ++ KM   ++ P +   N ++ G      ++    +
Sbjct: 126 PNV--FGVLIIAFSEMGLVEEALWVYYKM---DVLPAMQACNMVLDGLVKKGRFDTMWKV 180

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + +M+ +G  PNVV++  +++  C+ G   +A RL + MI+  + P   +Y  L+ G C 
Sbjct: 181 YGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCG 240

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R++ AE +F +M + G   N+++Y+ +++GYCK   ++ AL LY EML  G+ P+VV 
Sbjct: 241 ESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  L  GL +  ++  A K   +M   GV  + + Y   IDG CK G + EA+ L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D+  Y+ LI GLC   R++ A  L + + +   + + VTYN +I   C +G M+
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 358 KARDLFLDMEAK 369
           KA ++   M  K
Sbjct: 421 KAIEVCSQMTEK 432



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 120/223 (53%), Gaps = 6/223 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A    + +  FG  PN+F YN LI+G C+ G+   AL+L  E+            P+ 
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHE------ILPDV 368

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY+ +I GLC    +++A  L  +MK +   PN VTYN+LI G+C   +  +A  +  +
Sbjct: 369 FTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQ 428

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++PN+++F+ +++  CK GKM+ A  L   M+  G+ P+   Y  L+DG    G 
Sbjct: 429 MTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGN 488

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
              A  L   M+  G   NVF+ S LI+G CK+  I  A+ L+
Sbjct: 489 TKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 91/443 (20%), Positives = 167/443 (37%), Gaps = 99/443 (22%)

Query: 1   MEAA-ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           MEAA  L+ ++ + G  P+V  Y  LI+G  + G+T  A  L +EM     E G+   PN
Sbjct: 454 MEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQ----EAGL--HPN 507

Query: 60  TVTYTTIIDGLCKEGFV-DKAKELFLKMKDENINPNVVTYNSLIHGFC------------ 106
             T + +IDGLCK+G + D  K    K   +         +  ++  C            
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISE 567

Query: 107 -------------------------------------YANDWNEAKCL-FIEMMDQGVQP 128
                                                Y    N +K L F  ++ +    
Sbjct: 568 PCICVIRVTKLFATNNQPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRKNPS 627

Query: 129 NVVSFNVI--MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           ++ SF+++  +        + E  ++  L+I  G  P  F+  +L+  +  TG V  A  
Sbjct: 628 SIDSFSLMFALKACTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHN 687

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +F  + S     N+ S++ +I+ Y  N+    AL L+ +M    ++PD+V          
Sbjct: 688 MFDEIPS----KNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACA 743

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK------------------------ 282
           ++  ++    +   ++  G+  D     + I+   K                        
Sbjct: 744 DLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVL 803

Query: 283 -----NGYIVEAVELFRTLRILKYELDIR--AYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
                 G + E  + FR+++   Y L  R   + C++D LC++G L  A+E    +P   
Sbjct: 804 MACSHAGLVEEGKQHFRSMK-EDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP--- 859

Query: 336 LIADVVTYNIMIHALCADGKMDK 358
           +  + V +  ++ A    G  DK
Sbjct: 860 VRPNAVVWRTLLGACSLQGMWDK 882


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 193/354 (54%), Gaps = 12/354 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P V TY  +++GLC+ G T  A+ L +EM +        C PN  TY  I++GLC+E 
Sbjct: 76  CLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKG------CSPNIYTYNVIVEGLCEER 129

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+AK++  +M      P+VVTYNS I G C  +  +EA+     M    V P+VVS+ 
Sbjct: 130 KLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYT 186

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N LCK+G +D ASR+L+ M   G  P+   Y++L+DGFC  G V RA  L  SM  +
Sbjct: 187 TVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 246

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC+ N+ +Y+ L+    +   I  A  +  EM  +G  PDVV YN    GL +  +V++A
Sbjct: 247 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKA 306

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL-DIRAYNCLID 313
             +FD M   G   +  +Y   ++ LCK   + +A+ L    R  KY++ DI  Y  L+D
Sbjct: 307 KAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAR-EKYQIVDILLYTVLLD 365

Query: 314 GLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK GR   A  LF + L   +   DV  YN+M+ + C   ++DKA  +   M
Sbjct: 366 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQM 419



 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 202/367 (55%), Gaps = 13/367 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  GC PN++TYN ++ GLC       A  + EEMA   G F     P+ V
Sbjct: 98  DAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAV-RGYF-----PDVV 151

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY + I GLCK   VD+A++   +M    + P+VV+Y ++I+G C + D + A  +  +M
Sbjct: 152 TYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDQM 208

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P+VV+++ +++  CK G+++ A  LL+ M+++G RPN   YN+L+      G +
Sbjct: 209 TNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 268

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +AE++ V ME  G   +V SY+  I+G CK + ++ A +++  M+ +G  P+   Y+ L
Sbjct: 269 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 328

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +++ A  L ++ +      D   Y   +DGLCK G   EA  LF  +   K 
Sbjct: 329 VEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 388

Query: 302 -ELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKA 359
            E D+  YN ++D  CK  ++  A ++ +  L R     +VVT+NI++H LC D ++  A
Sbjct: 389 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNC--CNVVTWNILVHGLCVDDRLSDA 446

Query: 360 RDLFLDM 366
             + L M
Sbjct: 447 ETMLLTM 453



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 188/378 (49%), Gaps = 32/378 (8%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMA------------------NGNGEFGVV- 55
           C+P+ FT+  L+ GLCR+     A  L   M                   +   +FG   
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 56  ----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
                     C P  VTYT I+DGLCK G    A +L  +M+D+  +PN+ TYN ++ G 
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C     +EAK +  EM  +G  P+VV++N  +  LCK  ++DEA + L  M    V P+ 
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDV 182

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y T+++G C +G ++ A  +   M + GC  +V +YS LI+G+CK  E+E A+ L   
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML  G +P++V YN+L   L  +  + +A  +  EM+R G   D  +Y   IDGLCK   
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + +A  +F  +       +  +Y+ L++ LCK   L  A  L         I D++ Y +
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 346 MIHALCADGKMDKARDLF 363
           ++  LC  G+ D+A  LF
Sbjct: 363 LLDGLCKGGRFDEACALF 380



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 184/397 (46%), Gaps = 49/397 (12%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+ +  ++   GC P+V TY++LI+G C+ G    A+ L + M        + C+PN V 
Sbjct: 201 ASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM------LKLGCRPNMVA 254

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y +++  L + G + KA+++ ++M+     P+VV+YN+ I G C A    +AK +F  M+
Sbjct: 255 YNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV 314

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G  PN  S+++++ ELCK  ++D+A  L+E   +     +  +Y  L+DG C  GR +
Sbjct: 315 ERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFD 374

Query: 183 RAEELFVS----------------MESMGCKH-------------------NVFSYSILI 207
            A  LF                  M    CK                    NV +++IL+
Sbjct: 375 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILV 434

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G C +  +  A ++   M+ +G  PD V Y TL   + +  +   A +LF+E  + G  
Sbjct: 435 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 494

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   Y   I GL       EA  LF        +LD+  +N +I G  ++G   +  +L
Sbjct: 495 PDVVTYSALITGLVHENMAEEAYLLFT-------KLDVALWNAMILGYAENGSGDLGLKL 547

Query: 328 FRSLPRGVLIADVVTYNIMIHA-LCADGKMDKARDLF 363
           F  L    +  +  T+   I   L     + KAR LF
Sbjct: 548 FVELIESDVEPNARTFGKEISGKLVKAESLGKARGLF 584



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 145/284 (51%), Gaps = 3/284 (1%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M D++  P+  T+  L+ G C +N   +A+ L   M + G  P+   +N +++   K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             +A + L  M++    P    Y  ++DG C  GR   A +L   M   GC  N+++Y++
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++ G C+ ++++ A  +  EM  +G  PDVV YN+   GL +  +V+ A K    + R  
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMP 177

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V  D  +Y T I+GLCK+G +  A  +   +       D+  Y+ LIDG CK G ++ A 
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  S+ +     ++V YN ++ AL   G + KA D+ ++ME +
Sbjct: 238 GLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERR 281



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 143/281 (50%), Gaps = 14/281 (4%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           ++  Y  L++GLC+ G    A  LF ++ +       +C+P+   Y  ++D  CK   +D
Sbjct: 356 DILLYTVLLDGLCKGGRFDEACALFSKVLDEK-----ICEPDVFFYNVMLDSHCKRRQID 410

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA ++  +M + N   NVVT+N L+HG C  +  ++A+ + + M+D+G  P+ V++  ++
Sbjct: 411 KALQIHKQMLERNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 469

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + +CK GK   A  L E  ++ G  P+   Y+ L+ G       N AEE ++    +  K
Sbjct: 470 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLV---HENMAEEAYL----LFTK 522

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG-LFEIHQVERAFK 256
            +V  ++ +I GY +N   +  L L+ E++   ++P+   +     G L +   + +A  
Sbjct: 523 LDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARG 582

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           LFD   + G   D +   T ID   K G + EA  +F +++
Sbjct: 583 LFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 14/178 (7%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY TL++ +C+ G +  AL LFEE   G       C P+ VTY+ +I GL  E   
Sbjct: 460 PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG------CVPDVVTYSALITGLVHENMA 513

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV- 135
           ++A  LF K+       +V  +N++I G+      +    LF+E+++  V+PN  +F   
Sbjct: 514 EEAYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNARTFGKE 566

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           I  +L K   + +A  L +  ++ G  P+ FV NTL+D F   G +  A  +F SM+ 
Sbjct: 567 ISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCGDLEEARRIFYSMKQ 624


>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 211/387 (54%), Gaps = 27/387 (6%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +  A LF  KL   G   +  +Y TLI+GLC+ G T  AL+L + +       G + + N
Sbjct: 141 IHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD------GKLVQLN 194

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y T+I G+CK+  V+ A +L+ +M  + I+PNVVTY++LI GF       +A  LF 
Sbjct: 195 AVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFN 254

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +++ + ++P+  +FN++++  CK+ KM E   +  +M++ G+ P+   YN+LMDG+CL  
Sbjct: 255 KIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVK 314

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            VN A+ +F +M   G   ++ SY+ILING+CK K+++ A++L++EM  K I P+VV YN
Sbjct: 315 EVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYN 374

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL--- 296
           +L  GL +  ++  A +L D+M   GV  +   Y + ID L K   + +A+ L       
Sbjct: 375 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ 434

Query: 297 -----------------RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
                            ++  Y++ +  YN +I G CK G    A  L   +     I +
Sbjct: 435 GIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPN 494

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
            VTY I I +L  + + DKA  LF +M
Sbjct: 495 AVTYEITIRSLLDNNENDKAEKLFREM 521



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 162/320 (50%), Gaps = 4/320 (1%)

Query: 54  VVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
           ++ K N ++Y++          VD A  LF ++  +N  P    +N ++     +  ++ 
Sbjct: 45  LLTKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHT 104

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYN 169
              L  +M  +G++PN+ + N+++   C+ G    ++ +A    + ++ +G   +   Y 
Sbjct: 105 VLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYG 164

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           TL+ G C  G    A +L   ++    + N   Y+ +I G CK+K +  A  LYSEM+SK
Sbjct: 165 TLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSK 224

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           GI P+VV Y+ L  G F + +++ A  LF+++    +  D + +   +DG CK+  + E 
Sbjct: 225 GISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 284

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
             +F  +       D+  YN L+DG C    +  A  +F ++ +G +  D+ +YNI+I+ 
Sbjct: 285 KTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILING 344

Query: 350 LCADGKMDKARDLFLDMEAK 369
            C   K+DKA +LF +M  K
Sbjct: 345 FCKIKKVDKAMNLFNEMHCK 364



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 143/272 (52%), Gaps = 21/272 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   +F  +   G  P+V TYN+L++G C       A ++F  MA G    GV   P+  
Sbjct: 283 EGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQG----GV--NPDIR 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I+G CK   VDKA  LF +M  +NI PNVVTYNSLI G   +   + A  L  +M
Sbjct: 337 SYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 396

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+GV PN++++N I++ L K  ++D+A  L+      G++P+ + Y  L+DG C     
Sbjct: 397 HDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLC----- 451

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            + E         G    V +Y+++I+G+CK    + ALSL S+M      P+ V Y   
Sbjct: 452 -KVE---------GYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTYEIT 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
              L + ++ ++A KLF EM   G+   + +Y
Sbjct: 502 IRSLLDNNENDKAEKLFREMITRGLLNRSASY 533


>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
          Length = 861

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 201/364 (55%), Gaps = 20/364 (5%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDK 78
             T+  L+ GLC    T  A+++         E G  C PN  +Y  +++GLC E    +
Sbjct: 122 AITFTPLLKGLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNNLLNGLCDENRSQE 176

Query: 79  AKELFLKMKDE---NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           A EL   M D+      P+VV+Y ++I+GF    D ++A   + EM+D+G+ P+VV+++ 
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSS 236

Query: 136 IMNELCKNGKMD------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           I+  LCK   MD            E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ 
Sbjct: 237 IIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 296

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A +L   M S+G K N  +YS LINGYCK   +E AL L+ EM S G+ PD++ YN +  
Sbjct: 297 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 356

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GLF+  +   A +L+  +   G   +   Y   + GLCKN    +A+++F+ L ++  +L
Sbjct: 357 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL 416

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           + R +N +ID L K GR   A +LF +     L+ +  TY +M   +   G +++   LF
Sbjct: 417 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 476

Query: 364 LDME 367
           L ME
Sbjct: 477 LSME 480



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 16/292 (5%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + + P++ TY  LI   C A   +        ++ +G +   ++F  ++  LC + +  +
Sbjct: 81  DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 149 ASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM---ESMGCKHNVFSYS 204
           A  + L  M ++G  PN F YN L++G C   R   A EL   M      G   +V SY+
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF--------- 255
            +ING+ K  + + A S Y EML +GI PDVV Y+++   L +   +++ +         
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVI 260

Query: 256 ---KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
              KLFD M R GV  D   Y T IDG C  G + EA++L   +  +  + +   Y+ LI
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 320

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +G CK  R++ A  LF+ +    +  D++TYNI++  L    +   A++L++
Sbjct: 321 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 372



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TY+TLI+G C  G    A+ L   M +      V  KPNT
Sbjct: 260 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS------VGLKPNT 313

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   D+A ++ + +  + ++  A  +N ++D     GR
Sbjct: 374 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 433

Query: 181 VNRAEELFVSMESMGCKHNVFSYSIL 206
            + A++LFV+  S G   N ++Y ++
Sbjct: 434 NDEAKDLFVAFSSNGLVPNYWTYRLM 459



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 131/269 (48%), Gaps = 18/269 (6%)

Query: 14  GCEPNVFTYNTLINGLCR------------TGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           G  P+V TY+++I  LC+             G  I +  LF+ M       GV  KP+ +
Sbjct: 226 GILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMV----RIGV--KPDII 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+IDG C  G +D+A +L   M    + PN VTY++LI+G+C  +   +A  LF EM
Sbjct: 280 TYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+++++N+I+  L +  +   A  L   + + G +     YN ++ G C     
Sbjct: 340 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F ++  M  K    +++I+I+   K    + A  L+    S G+ P+   Y  +
Sbjct: 400 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
              +     +E   +LF  M+ +G   D+
Sbjct: 460 AENIIGQGLLEELDQLFLSMEDNGCTVDS 488



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/219 (23%), Positives = 95/219 (43%), Gaps = 22/219 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P++ TYN ++ GL +T  T  A  L+  +     +  +       
Sbjct: 331 DALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELS------ 384

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I+ GLCK    D A ++F  +   ++     T+N +I         +EAK LF+  
Sbjct: 385 TYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAF 444

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN  ++ ++   +   G ++E  +L      + +  N    ++ M  F +   +
Sbjct: 445 SSNGLVPNYWTYRLMAENIIGQGLLEELDQLF-----LSMEDNGCTVDSGMLNFIVRELL 499

Query: 182 NRAEELFVSMESMGCKHNVFSYSILING---YCKNKEIE 217
            RA +  V +        +FSYS +  G    C N E++
Sbjct: 500 QRALKFCVGI--------LFSYSPIRGGIFSVCVNSEVQ 530


>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 952

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/364 (34%), Positives = 201/364 (55%), Gaps = 20/364 (5%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDK 78
             T+  L+ GLC    T  A+++         E G  C PN  +Y  +++GLC E    +
Sbjct: 122 AITFTPLLKGLCADKRTSDAMDIVLRRMT---ELG--CIPNVFSYNNLLNGLCDENRSQE 176

Query: 79  AKELFLKMKDE---NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           A EL   M D+      P+VV+Y ++I+GF    D ++A   + EM+D+G+ P+VV+++ 
Sbjct: 177 ALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSS 236

Query: 136 IMNELCKNGKMD------------EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           I+  LCK   MD            E+ +L +LM++IGV+P+   Y+TL+DG+CL G+++ 
Sbjct: 237 IIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDE 296

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A +L   M S+G K N  +YS LINGYCK   +E AL L+ EM S G+ PD++ YN +  
Sbjct: 297 AMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQ 356

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GLF+  +   A +L+  +   G   +   Y   + GLCKN    +A+++F+ L ++  +L
Sbjct: 357 GLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKL 416

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           + R +N +ID L K GR   A +LF +     L+ +  TY +M   +   G +++   LF
Sbjct: 417 EARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 476

Query: 364 LDME 367
           L ME
Sbjct: 477 LSME 480



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 50/338 (14%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++   GC PNVF+YN L+NGLC    +  AL L   MA+  G       P+ V+YTT
Sbjct: 145 VLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGG---SPPDVVSYTT 201

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS------------------------- 100
           +I+G  KEG  DKA   + +M D  I P+VVTY+S                         
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIE 261

Query: 101 ----------------------LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
                                 LI G+C A   +EA  L   M+  G++PN V+++ ++N
Sbjct: 262 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 321

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
             CK  +M++A  L + M   GV P+   YN ++ G   T R   A+EL+V +   G + 
Sbjct: 322 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 381

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
            + +Y+I+++G CKNK  + AL ++  +    +K +   +N +   L ++ + + A  LF
Sbjct: 382 ELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 441

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
                +G+  + W YR   + +   G + E  +LF ++
Sbjct: 442 VAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSM 479



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/292 (29%), Positives = 146/292 (50%), Gaps = 16/292 (5%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + + P++ TY  LI   C A   +        ++ +G +   ++F  ++  LC + +  +
Sbjct: 81  DEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 140

Query: 149 ASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM---ESMGCKHNVFSYS 204
           A  + L  M ++G  PN F YN L++G C   R   A EL   M      G   +V SY+
Sbjct: 141 AMDIVLRRMTELGCIPNVFSYNNLLNGLCDENRSQEALELLHMMADDRGGGSPPDVVSYT 200

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF--------- 255
            +ING+ K  + + A S Y EML +GI PDVV Y+++   L +   +++ +         
Sbjct: 201 TVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVI 260

Query: 256 ---KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
              KLFD M R GV  D   Y T IDG C  G + EA++L   +  +  + +   Y+ LI
Sbjct: 261 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLI 320

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +G CK  R++ A  LF+ +    +  D++TYNI++  L    +   A++L++
Sbjct: 321 NGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYV 372



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 117/206 (56%), Gaps = 6/206 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  +   G +P++ TY+TLI+G C  G    A+ L   M +      V  KPNT
Sbjct: 260 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS------VGLKPNT 313

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I+G CK   ++ A  LF +M+   ++P+++TYN ++ G         AK L++ 
Sbjct: 314 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 373

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G Q  + ++N+I++ LCKN   D+A ++ + +  + ++  A  +N ++D     GR
Sbjct: 374 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 433

Query: 181 VNRAEELFVSMESMGCKHNVFSYSIL 206
            + A++LFV+  S G   N ++Y ++
Sbjct: 434 NDEAKDLFVAFSSNGLVPNYWTYRLM 459



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 135/283 (47%), Gaps = 18/283 (6%)

Query: 14  GCEPNVFTYNTLINGLCR------------TGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           G  P+V TY+++I  LC+             G  I +  LF+ M       GV  KP+ +
Sbjct: 226 GILPDVVTYSSIIAALCKGQAMDKPWSHCKEGRVIESEKLFDLMV----RIGV--KPDII 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+IDG C  G +D+A +L   M    + PN VTY++LI+G+C  +   +A  LF EM
Sbjct: 280 TYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+++++N+I+  L +  +   A  L   + + G +     YN ++ G C     
Sbjct: 340 ESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLT 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F ++  M  K    +++I+I+   K    + A  L+    S G+ P+   Y  +
Sbjct: 400 DDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
              +     +E   +LF  M+ +G   D+      +  L + G
Sbjct: 460 AENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRG 502



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 97/195 (49%), Gaps = 6/195 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G +PN  TY+TLING C+      AL LF+EM +          P+ +
Sbjct: 296 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG------VSPDII 349

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I+ GL +      AKEL++++ +      + TYN ++HG C     ++A  +F  +
Sbjct: 350 TYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNL 409

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++    +FN++++ L K G+ DEA  L       G+ PN + Y  + +     G +
Sbjct: 410 CLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLL 469

Query: 182 NRAEELFVSMESMGC 196
              ++LF+SME  GC
Sbjct: 470 EELDQLFLSMEDNGC 484


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/367 (35%), Positives = 208/367 (56%), Gaps = 7/367 (1%)

Query: 1   MEAA-ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +EAA +LF +++  G  P++ TYN+LI+G  + G    A+++FEEM +        C+P+
Sbjct: 267 LEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAG------CEPD 320

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TY ++I+  CK   + +A E    MK   + PNVVTY++LI  FC A    EA   F+
Sbjct: 321 VITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFV 380

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G+QPN  ++  +++  CK G ++EA +L   M Q GV  N   Y  L+DG C  G
Sbjct: 381 DMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDG 440

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+  AEELF ++   G   N   Y+ L +GY K K +E A+ +  EM  K +KPD+++Y 
Sbjct: 441 RMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYG 500

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T   GL   +++E +  +  EM   G+ A+++ Y T ID   K G   EAV L + ++ L
Sbjct: 501 TKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDL 560

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++ +  Y  LIDGLCK G ++ A   F  + R  L  +++ Y  +I  LC +  +++A
Sbjct: 561 GIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEA 620

Query: 360 RDLFLDM 366
           ++LF +M
Sbjct: 621 KNLFNEM 627



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 181/360 (50%), Gaps = 6/360 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++F +++  GCEP+V TYN+LIN  C+      A     E  +G  + G+  +PN VT
Sbjct: 305 AVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAF----EYLHGMKQRGL--QPNVVT 358

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T+ID  CK G + +A + F+ M    + PN  TY SLI   C   D NEA  L  EM 
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQ 418

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV  N+V++  +++ LC++G+M EA  L   +++ G   N  +Y +L  G+     + 
Sbjct: 419 QAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMME 478

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A ++   M     K ++  Y   I G C+  EIE ++++  EM+  G+  +  IY TL 
Sbjct: 479 KAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLI 538

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
              F++ +   A  L  EMQ  G+      Y   IDGLCK G + +AV  F  +     +
Sbjct: 539 DAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQ 598

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +I  Y  LIDGLCK+  L+ A  LF  +    +  D + Y  +I      G   +A  L
Sbjct: 599 PNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSL 658



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 190/369 (51%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   F+ +   G +PN FTY +LI+  C+ G    A  L  EM             N 
Sbjct: 373 LEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNL------NI 426

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT ++DGLC++G + +A+ELF  +       N   Y SL HG+  A    +A  +  E
Sbjct: 427 VTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEE 486

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + ++P+++ +   +  LC+  +++++  ++  M+  G+  N+++Y TL+D +   G+
Sbjct: 487 MNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGK 546

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  L   M+ +G K  V +Y +LI+G CK   ++ A+  +  M   G++P+++IY  
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +   +E A  LF+EM   G++ D   Y + IDG  K+G   EA+ L   +  + 
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            ELD+ AY  LI G  + G++++A  L   + R  +I D V    ++      G +++A 
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726

Query: 361 DLFLDMEAK 369
            L  DM  +
Sbjct: 727 ALHDDMARR 735



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 165/315 (52%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VC+P    + T+ + L   G +++A++ F KM    + P V + N L+H    ++    A
Sbjct: 176 VCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLA 235

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
              F +M+  G+ P+V ++N+++  L + G ++ A  L E M   G+RP+   YN+L+DG
Sbjct: 236 LSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDG 295

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +   G +  A  +F  M+  GC+ +V +Y+ LIN +CK + I  A      M  +G++P+
Sbjct: 296 YGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPN 355

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+TL     +   +  A K F +M R G+  + + Y + ID  CK G + EA +L  
Sbjct: 356 VVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLES 415

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++     L+I  Y  L+DGLC+ GR++ A ELF +L +     +   Y  + H      
Sbjct: 416 EMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAK 475

Query: 355 KMDKARDLFLDMEAK 369
            M+KA D+  +M  K
Sbjct: 476 MMEKAMDILEEMNKK 490



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 128/255 (50%), Gaps = 6/255 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P++  Y T I GLCR      ++ +  EM +           N+  YTT+ID   K G 
Sbjct: 493 KPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCG------LTANSYIYTTLIDAYFKVGK 546

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             +A  L  +M+D  I   VVTY  LI G C      +A   F  M   G+QPN++ +  
Sbjct: 547 TTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTA 606

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCKN  ++EA  L   M+  G+ P+  VY +L+DG    G    A  L   M  +G
Sbjct: 607 LIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIG 666

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + ++ +Y+ LI G+ +  +++ A SL  EML KGI PD V+   L    +E+  +  A 
Sbjct: 667 MELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEAL 726

Query: 256 KLFDEMQRHGVAADT 270
            L D+M R G+ + T
Sbjct: 727 ALHDDMARRGLISGT 741


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 197/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F  +   GC PNVF+Y+ LI GLCR      A  L  EM +G  +      PN V
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQ------PNVV 123

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++ GLCK G + +A +LF +M      P+ V YN LI GF    D  EA  LF EM
Sbjct: 124 TYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEM 183

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P V ++N +++   + G+      L + M++ G  PN F +N L+DGFC  G +
Sbjct: 184 LEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDM 243

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF+ M S+GC  +V SY+ L+ G C   +   A  L  EM+  G+ PD+V YN L
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A KLF E+ + G+  D ++Y T ID LC+ G +  A  +F+ +     
Sbjct: 304 IDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS 363

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D      L+ GLC+  RL  + ELF+++ +   +  +  YN++++ LC   + D   +
Sbjct: 364 APDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423

Query: 362 LFLDMEAK 369
           +F ++  +
Sbjct: 424 IFHELTER 431



 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/353 (35%), Positives = 187/353 (52%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN +TY  L+  LC+      A ++F  MA         C PN  +Y+ +I GLC+ 
Sbjct: 47  GCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG------CSPNVFSYSILIAGLCRG 100

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A EL  +M D    PNVVTY SL+ G C      EA  LF  M+ +G  P+ V +
Sbjct: 101 QKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVY 160

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           NV+++   K G M EA RL E M++ G  P  F YN+L+ GF   G   R + LF  M  
Sbjct: 161 NVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLR 220

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  N+F+++ L++G+CK  ++  A  L+ EM S G  PDVV YNTL  G+    +   
Sbjct: 221 QGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHE 280

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L  EM R GV  D  +Y   IDG  K+G +  A++LF  +     E D  +Y+ +ID
Sbjct: 281 AQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIID 340

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LC++G++  A+ +F+ +       D      ++  LC   ++ ++ +LF  M
Sbjct: 341 CLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAM 393



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/351 (35%), Positives = 182/351 (51%), Gaps = 6/351 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
              +YN L+  L ++G        + +M       G  C PNT TY  ++  LC+    +
Sbjct: 16  GTLSYNYLLEVLAKSGRCDHVYGTYNDM------LGAGCVPNTYTYGYLLRSLCQAQRFE 69

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+ +F  M  +  +PNV +Y+ LI G C     +EA  L  EM+D G QPNVV++  ++
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + LCK GK+ EA  L   M+  G  P+  VYN L+DGF   G +  A  LF  M   GC 
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             VF+Y+ L++G+ +  E     SL+ +ML +G  P++  +N L  G  ++  +  A +L
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRL 249

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F EM+  G   D  +Y T + G+C  G   EA  L R +       DI +YN LIDG  K
Sbjct: 250 FLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSK 309

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           SG L  A +LF  +P+  L  D  +Y+ +I  LC  GK+  A  +F DM A
Sbjct: 310 SGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIA 360



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 147/279 (52%), Gaps = 6/279 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   GC P VFTYN+L++G  R G      +LF++M          C PN  
Sbjct: 175 EAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQG------CVPNIF 228

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++DG CK G + +A  LFL+M+     P+VV+YN+L+ G C     +EA+ L  EM
Sbjct: 229 TFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREM 288

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P++VS+N++++   K+G +D A +L   + + G+ P+AF Y+T++D  C  G+V
Sbjct: 289 IRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKV 348

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M + G   +      L+ G C+ + +  +  L+  M+     P +  YN L
Sbjct: 349 GAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
              L +  + +   ++F E+   G + D    +  ++ L
Sbjct: 409 MYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 143/310 (46%), Gaps = 35/310 (11%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           N   ++YN L+     +   +     + +M+  G  PN  ++  ++  LC+  + +EA  
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +   M   G  PN F Y+ L+ G C   +V+ A EL   M   G + NV +Y  L++G C
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE----------- 260
           K  +++ A+ L+S M+ +G  PD V+YN L  G  +   +  A++LF+E           
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVF 193

Query: 261 ------------------------MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
                                   M R G   + + +   +DG CK G +VEA  LF  +
Sbjct: 194 TYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEM 253

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R L    D+ +YN L+ G+C  G+   A  L R + R  +  D+V+YNI+I      G +
Sbjct: 254 RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGAL 313

Query: 357 DKARDLFLDM 366
           D A  LF ++
Sbjct: 314 DHAIKLFYEI 323



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 98/209 (46%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q+        YN L++    +GR +     +  M   GC  N ++Y  L+   C+ +  E
Sbjct: 10  QVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFE 69

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A S++  M ++G  P+V  Y+ L  GL    +V+ A +L +EM   G   +   Y + +
Sbjct: 70  EARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLL 129

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            GLCK G + EAV+LF  +       D   YN LIDG  K G +  A+ LF  +     I
Sbjct: 130 SGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI 189

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
             V TYN ++      G+  + + LF DM
Sbjct: 190 PTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 8/220 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           +EA  LF+++R  GC P+V +YNTL+ G+C  G    A  L  EM  +G G       P+
Sbjct: 244 VEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVG-------PD 296

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V+Y  +IDG  K G +D A +LF ++    + P+  +Y+++I   C A     A  +F 
Sbjct: 297 IVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFK 356

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G  P+      ++  LC+  ++ E+  L + M++    P    YN LM   C   
Sbjct: 357 DMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAK 416

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           R +   E+F  +   G   +V    +++    ++ + E A
Sbjct: 417 RSDDVCEIFHELTERGFSPDVEISKVILETLRRSDDKEAA 456



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 80/172 (46%)

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
           H   SY+ L+    K+   +     Y++ML  G  P+   Y  L   L +  + E A  +
Sbjct: 15  HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M   G + + ++Y   I GLC+   + EA EL   +    ++ ++  Y  L+ GLCK
Sbjct: 75  FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G+LK A +LF  +       D V YN++I      G M +A  LF +M  K
Sbjct: 135 MGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 198/355 (55%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N LIN   R G    A+ +FE+M N     G++  P+TVT+ T+I  LC+ 
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRI 308

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS- 132
           G +D A   F  M D  + P+   Y  LI G C   +  +AK L  EMM++ + P  V  
Sbjct: 309 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 368

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F+ I+N LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A  L  +M 
Sbjct: 369 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 428

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+Y+ +  GLF+  +  
Sbjct: 429 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 488

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A K+F EM   G       Y   + GLC+N    EA  L   L  +  + DI  +N +I
Sbjct: 489 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 548

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+ +E
Sbjct: 549 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 603



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 198/389 (50%), Gaps = 48/389 (12%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P + TYN LI+   R     + L +   +  NG G       P+  +Y+ +I G  K+G 
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG-------PDDFSYS-LIYGFVKDGE 63

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VDKA  LFL+M ++ + P ++  NS+I   C   + ++A+ +  +M+D G+ P++ ++++
Sbjct: 64  VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 123

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT----------------- 178
           I++ LCK+  MD+A R+LE M++ G RPN+  YN+L+ G+ ++                 
Sbjct: 124 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 183

Query: 179 ------------------GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE--IEG 218
                             GR N A+ +F SM   G K ++ SYS +++GY    +  +  
Sbjct: 184 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 243

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             ++++ ML+KGI P+  ++N L         +++A  +F++MQ  G+  DT  + T I 
Sbjct: 244 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 303

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLI 337
            LC+ G + +A+  F  +  +        Y CLI G C  G L  A EL    + + +  
Sbjct: 304 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 363

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
             V  ++ +I+ LC +G++ + +D+ +DM
Sbjct: 364 PGVKYFSSIINNLCKEGRVAEGKDI-MDM 391



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/372 (28%), Positives = 194/372 (52%), Gaps = 13/372 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+++   G  P +   N++I  LC+      A ++ ++M +     G+   P+  
Sbjct: 66  KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLF 119

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ IIDGLCK   +DKA+ +  +M +    PN +TYNSLIHG+  +  WNE+  +F +M
Sbjct: 120 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 179

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P V + N  ++ L K+G+ +EA  + + M+  G +P+   Y+T++ G+      
Sbjct: 180 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 239

Query: 182 NRAE--ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
             A+   +F  M + G   N   ++ILIN Y +   ++ A+ ++ +M +KG+ PD V + 
Sbjct: 240 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 299

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T+   L  I +++ A   F+ M   GV      Y   I G C +G +V+A EL     ++
Sbjct: 300 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELIS--EMM 357

Query: 300 KYELD---IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
             ++    ++ ++ +I+ LCK GR+    ++   + +     +VVT+N ++   C  G M
Sbjct: 358 NKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNM 417

Query: 357 DKARDLFLDMEA 368
           ++A  L   M +
Sbjct: 418 EEAFALLDAMAS 429



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 5/343 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCK
Sbjct: 324 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCK 378

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V + K++   M      PNVVT+NSL+ G+C   +  EA  L   M   G++PN   
Sbjct: 379 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 438

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  CKNG++D+A  +   M+  GV+P + +Y+ ++ G     R   A+++F  M 
Sbjct: 439 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 498

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y +++ G C+N   + A  L  ++ +  +K D++ +N +   +F++ + +
Sbjct: 499 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 558

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +LFD +  +G+  +   Y   I  L K     EA  LF ++    +  D R  N ++
Sbjct: 559 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 618

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
             L     +  A      +    L  +  T +++      +GK
Sbjct: 619 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 661


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 198/355 (55%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N LIN   R G    A+ +FE+M N     G++  P+TVT+ T+I  LC+ 
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRI 470

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS- 132
           G +D A   F  M D  + P+   Y  LI G C   +  +AK L  EMM++ + P  V  
Sbjct: 471 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 530

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F+ I+N LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A  L  +M 
Sbjct: 531 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 590

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+Y+ +  GLF+  +  
Sbjct: 591 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 650

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A K+F EM   G       Y   + GLC+N    EA  L   L  +  + DI  +N +I
Sbjct: 651 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 710

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+ +E
Sbjct: 711 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 765



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 205/407 (50%), Gaps = 52/407 (12%)

Query: 3   AAALFMKLRVFGCE----PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCK 57
           A  LF ++  + C     P + TYN LI+   R     + L +   +  NG G       
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 208

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  +Y+ +I G  K+G VDKA  LFL+M ++ + P ++  NS+I   C   + ++A+ +
Sbjct: 209 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+D G+ P++ ++++I++ LCK+  MD+A R+LE M++ G RPN+  YN+L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 178 T-----------------------------------GRVNRAEELFVSMESMGCKHNVFS 202
           +                                   GR N A+ +F SM   G K ++ S
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 203 YSILINGYCKNKE--IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           YS +++GY    +  +    ++++ ML+KGI P+  ++N L         +++A  +F++
Sbjct: 388 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 447

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           MQ  G+  DT  + T I  LC+ G + +A+  F  +  +        Y CLI G C  G 
Sbjct: 448 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 507

Query: 321 LKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L  A EL    + + +    V  ++ +I+ LC +G++ + +D+ +DM
Sbjct: 508 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI-MDM 553



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 191/370 (51%), Gaps = 9/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+++   G  P +   N++I  LC+      A ++ ++M +     G+   P+  
Sbjct: 228 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLF 281

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ IIDGLCK   +DKA+ +  +M +    PN +TYNSLIHG+  +  WNE+  +F +M
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P V + N  ++ L K+G+ +EA  + + M+  G +P+   Y+T++ G+      
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 401

Query: 182 NRAE--ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
             A+   +F  M + G   N   ++ILIN Y +   ++ A+ ++ +M +KG+ PD V + 
Sbjct: 402 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 461

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T+   L  I +++ A   F+ M   GV      Y   I G C +G +V+A EL   +   
Sbjct: 462 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 521

Query: 300 KYELD-IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                 ++ ++ +I+ LCK GR+    ++   + +     +VVT+N ++   C  G M++
Sbjct: 522 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 581

Query: 359 ARDLFLDMEA 368
           A  L   M +
Sbjct: 582 AFALLDAMAS 591



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 5/343 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCK
Sbjct: 486 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCK 540

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V + K++   M      PNVVT+NSL+ G+C   +  EA  L   M   G++PN   
Sbjct: 541 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 600

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  CKNG++D+A  +   M+  GV+P + +Y+ ++ G     R   A+++F  M 
Sbjct: 601 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 660

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y +++ G C+N   + A  L  ++ +  +K D++ +N +   +F++ + +
Sbjct: 661 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 720

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +LFD +  +G+  +   Y   I  L K     EA  LF ++    +  D R  N ++
Sbjct: 721 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 780

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
             L     +  A      +    L  +  T +++      +GK
Sbjct: 781 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 823


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 210/368 (57%), Gaps = 13/368 (3%)

Query: 1   MEAAALFMKLRVFGCEP--NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           M  A LF  +R+  CEP  ++FTY +L+ G CR           +++    G F V+ + 
Sbjct: 205 MAVARLFF-VRILRCEPGPDLFTYTSLVLGYCRN----------DDVERACGVFCVMPRR 253

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N V+YT +I GLC+ G + +A E + +M+++   P V TY  L+   C +    EA  LF
Sbjct: 254 NAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLF 313

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM ++G +PNV ++ V+++ LCK G+MDEA ++L  M++ GV P+   +N L+  +C  
Sbjct: 314 GEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKR 373

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A  +   MES     NV +Y+ LI G+C+ K ++ A++L ++M+   + PDVV Y
Sbjct: 374 GMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTY 433

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  GL E+  V+ A +LF  M R G + D W +  F+  LC+ G + EA ++  +L+ 
Sbjct: 434 NTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKE 493

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +  AY  LIDG CK+G+++ A  LF+ +     + + +T+N+MI  L  +GK+  
Sbjct: 494 KHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQD 553

Query: 359 ARDLFLDM 366
           A  L  DM
Sbjct: 554 AMLLVEDM 561



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 190/359 (52%), Gaps = 6/359 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA +LF ++R  GCEPNV+TY  LI+ LC+ G    AL +  EM     E GV   P+ 
Sbjct: 307 LEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMV----EKGVA--PSV 360

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V +  +I   CK G ++ A  +   M+ + + PNV TYN LI GFC     + A  L  +
Sbjct: 361 VPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNK 420

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++  + P+VV++N +++ LC+ G +D ASRL  LMI+ G  P+ + +N  M   C  GR
Sbjct: 421 MVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGR 480

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A ++  S++    K N  +Y+ LI+GYCK  +IE A SL+  ML++   P+ + +N 
Sbjct: 481 VGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNV 540

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +V+ A  L ++M +  V      Y   ++ + K      A E+   L    
Sbjct: 541 MIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSG 600

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           Y+ ++  Y   I   C  GRL+ A E+   +    ++ D   YN++I+A    G +D A
Sbjct: 601 YQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSA 659



 Score =  147 bits (372), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 176/366 (48%), Gaps = 15/366 (4%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM----ANGNGEFGVVCKPNTV 61
           L ++ R      NV   N++I            LNL   M    A  + +  +  K +  
Sbjct: 95  LLVRHRTLRAAENV--RNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLT 152

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENIN---PNVVTYNSLIHGFCYANDWNEAKCLF 118
           +Y  ++  L +   VD+   L+ +M  +N N   PN++T N++++ +C   +   A+  F
Sbjct: 153 SYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVARLFF 212

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           + ++     P++ ++  ++   C+N  ++ A  +  +M     R NA  Y  L+ G C  
Sbjct: 213 VRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM----PRRNAVSYTNLIHGLCEA 268

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVI 237
           G+++ A E +  M   GC   V +Y++L+   C++ +E+E ALSL+ EM  +G +P+V  
Sbjct: 269 GKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELE-ALSLFGEMRERGCEPNVYT 327

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L   L +  +++ A K+ +EM   GVA     +   I   CK G + +AV +   + 
Sbjct: 328 YTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLME 387

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K   ++R YN LI G C+   +  A  L   +    L  DVVTYN +IH LC  G +D
Sbjct: 388 SKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVD 447

Query: 358 KARDLF 363
            A  LF
Sbjct: 448 SASRLF 453



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 177/395 (44%), Gaps = 35/395 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   L+    + N   Y  LI+G C+ G    A +LF+ M          C PN++
Sbjct: 483 EAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRM------LAEECLPNSI 536

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +IDGL KEG V  A  L   M   ++ P + TYN L+       D++ A  +   +
Sbjct: 537 TFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRL 596

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QPNVV++   +   C  G+++EA  ++  +   GV  ++F+YN L++ +   G +
Sbjct: 597 ISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLL 656

Query: 182 NRAEELFVSMESMGCKHNVFSYSILI-----------------------NGYCKNKEIEG 218
           + A  +   M   GC+ +  +YSIL+                       N    N +I  
Sbjct: 657 DSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWS 716

Query: 219 ALS------LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +       L+ +M   G  P++  Y+ L  GL ++ ++  AF L+  M+  G++     
Sbjct: 717 KIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEII 776

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + + +   CK G   EAV L  ++    +   + +Y  LI GL +    + A  +F SL 
Sbjct: 777 HNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLL 836

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           R     D V + ++I  L   G +D+  +L   ME
Sbjct: 837 RCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLME 871



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 165/378 (43%), Gaps = 35/378 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AA+LF ++    C PN  T+N +I+GL + G    A+ L E+MA    +F V  KP   
Sbjct: 518 HAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMA----KFDV--KPTLH 571

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++ + KE   D+A E+  ++      PNVVTY + I  +C      EA+ + I++
Sbjct: 572 TYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKI 631

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV  +   +N+++N     G +D A  +L  M   G  P+   Y+ LM    +    
Sbjct: 632 KNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHK 691

Query: 182 NRAEE-----------------------------LFVSMESMGCKHNVFSYSILINGYCK 212
                                             LF  M   GC  N+ +YS LING CK
Sbjct: 692 KEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCK 751

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A SLY  M   GI P  +I+N+L     ++     A  L D M      A   +
Sbjct: 752 VGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLES 811

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y+  I GL +     +A  +F +L    Y  D  A+  LIDGL K+G +    EL   + 
Sbjct: 812 YKLLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLME 871

Query: 333 RGVLIADVVTYNIMIHAL 350
           +        TY++++  L
Sbjct: 872 KNGCRLHPETYSMLMQEL 889



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 7/244 (2%)

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ S+N ++  L +   +DE   L + M+      V PN    NT+++ +C  G +  A 
Sbjct: 150 SLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNMAVAR 209

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             FV +       ++F+Y+ L+ GYC+N ++E A  ++  M  +    + V Y  L  GL
Sbjct: 210 LFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRR----NAVSYTNLIHGL 265

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            E  ++  A + +  M+  G       Y   +  LC++G  +EA+ LF  +R    E ++
Sbjct: 266 CEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNV 325

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  LID LCK GR+  A ++   +    +   VV +N +I + C  G M+ A  +   
Sbjct: 326 YTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGL 385

Query: 366 MEAK 369
           ME+K
Sbjct: 386 MESK 389


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/363 (36%), Positives = 200/363 (55%), Gaps = 7/363 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF  +   G   N    N LI+   + G    A+ +F EM  G G      +PN VTY+T
Sbjct: 394 LFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEM-QGQG-----VRPNVVTYST 447

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I   C+ G +  A E F +M    I PN   Y+SLIHGFC   D  +AK    EMM +G
Sbjct: 448 LISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKG 507

Query: 126 V-QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + +PN+V F+ I++ LC  G++ +A  +  L+I IG RP    +N+L+DG+CL G++ +A
Sbjct: 508 LHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKA 567

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +  +M S+G + +V + + L++GYCK+ +I+  L L+ EML K +KP  V YN +  G
Sbjct: 568 FGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDG 627

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    +   A K+F EM   G A D   Y+  + GLC+N    EA+ LF  L  +  + D
Sbjct: 628 LLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFD 687

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I   N +I+ L K  R + A +LF ++    L+ +V TY +MI  L  +G +++A  +F 
Sbjct: 688 ITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFS 747

Query: 365 DME 367
            ME
Sbjct: 748 SME 750



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 188/359 (52%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++    C P+  +YNT+I  LC    +  AL++ + MA   G     C P+ V++ T
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGR----CSPDVVSFNT 237

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G  K+G V KA  LF +M  + + P+V TYNS++   C A   ++A+ +  +M+D+G
Sbjct: 238 VIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKG 297

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+P+ V++N I++    +G   E++++   M   G+ P+   +++ M   C  GR   AE
Sbjct: 298 VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAE 357

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F  M + G   ++ SYSIL++GY          +L+  M  KGI  +    N L    
Sbjct: 358 EIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH 417

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A  +F EMQ  GV  +   Y T I   C+ G + +A+E F  +  +  E + 
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNT 477

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y+ LI G C  G L  A E     + +G+   ++V ++ +IH+LC +G++  A+D+F
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVF 536



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 197/432 (45%), Gaps = 65/432 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------- 51
           +A  LF ++   G  P+V TYN++++ LC+      A  +  +M +   E          
Sbjct: 250 KACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAII 309

Query: 52  FGVVCK-------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G  C                    P+TVT+++ +  LCK G    A+E+F  M  +   
Sbjct: 310 HGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHM 369

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++V+Y+ L+HG+     + +   LF  M D+G+  N    N++++   K G MDEA  +
Sbjct: 370 PDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLV 429

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M   GVRPN   Y+TL+  FC  GR+  A E F  M S+G + N   Y  LI+G+C 
Sbjct: 430 FTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCM 489

Query: 213 NKEIEGALSLYSEMLSKGI------------------------------------KPDVV 236
           + ++  A    SEM+SKG+                                    +P +V
Sbjct: 490 HGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIV 549

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N+L  G   + ++E+AF + D M   G+  D     T + G CK+G I + + LFR +
Sbjct: 550 TFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKSGKIDDGLILFREM 609

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
              K +     YN ++DGL ++GR   A ++F  +       D+ TY I++  LC +   
Sbjct: 610 LHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLT 669

Query: 357 DKARDLFLDMEA 368
           D+A  LF  + A
Sbjct: 670 DEAITLFHKLGA 681



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 178/370 (48%), Gaps = 9/370 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTV 61
             A   +L   G +       T +  LC    T  A++ L   M+       + C P+ +
Sbjct: 143 GPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSE------LSCVPDAI 196

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +Y T+I  LC +    +A ++  +M  E    +P+VV++N++IHGF    + ++A  LF 
Sbjct: 197 SYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFN 256

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +GV P+V ++N I++ LCK   MD+A  +L  M+  GV P+   YN ++ G+  +G
Sbjct: 257 EMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSG 316

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
               + ++F  M S G   +  ++S  ++  CK+   + A  ++  M +KG  PD+V Y+
Sbjct: 317 HWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYS 376

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G     +      LF  M   G+ ++       I    K G + EA+ +F  ++  
Sbjct: 377 ILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++  Y+ LI   C+ GRL  A E F  +    +  +   Y+ +IH  C  G + KA
Sbjct: 437 GVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKA 496

Query: 360 RDLFLDMEAK 369
           ++   +M +K
Sbjct: 497 KEFISEMMSK 506



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 166/344 (48%), Gaps = 7/344 (2%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTV-TYTTIIDGLCKEGFVDKAKELFLKMKD 88
           C  G  +V L LF  +     E G    P TV TY  ++D  C+    D       ++  
Sbjct: 96  CSNGPALV-LALFNRICRE--EAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLR 152

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEA-KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
             +    +   + +   C+A   +EA   L   M +    P+ +S+N ++  LC + +  
Sbjct: 153 AGLKTGTIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQ 212

Query: 148 EASRLLELMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           EA  +++ M + G R  P+   +NT++ GF   G V++A  LF  M   G   +V +Y+ 
Sbjct: 213 EALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNS 272

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++  CK + ++ A  +  +M+ KG++PD V YN +  G       + + K+F +M   G
Sbjct: 273 IVDALCKARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKG 332

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  DT  + +F+  LCK+G   +A E+F+ +    +  DI +Y+ L+ G    GR     
Sbjct: 333 LIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMN 392

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LF S+    ++++    NI+I A    G MD+A  +F +M+ +
Sbjct: 393 NLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQ 436



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 145/318 (45%), Gaps = 30/318 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           +A   F ++   G EPN   Y++LI+G C  G  + A     EM                
Sbjct: 460 DAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSI 519

Query: 47  -----------NGNGEFGVVC----KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                      +    F +V     +P  VT+ ++IDG C  G ++KA  +   M    I
Sbjct: 520 IHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGI 579

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+VVT N+L+ G+C +   ++   LF EM+ + V+P  V++N++++ L + G+   A +
Sbjct: 580 EPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKK 639

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +   MI  G   +   Y  L+ G C     + A  LF  + +M CK ++   + +IN   
Sbjct: 640 MFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALY 699

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K +  E A  L++ + + G+ P+V  Y  +   L +   VE A  +F  M++ G A  + 
Sbjct: 700 KVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSR 759

Query: 272 AYRTFIDGLCKNGYIVEA 289
                I  L + G IV+A
Sbjct: 760 LLNDIIRMLLQKGDIVKA 777



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +F  +   G  P + T+N+LI+G C  G    A  + + M +      V  +P+ 
Sbjct: 530 MDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS------VGIEPDV 583

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT  T++ G CK G +D    LF +M  + + P  VTYN ++ G   A   + AK +F E
Sbjct: 584 VTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHE 643

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G   ++ ++ +++  LC+N   DEA  L   +  +  + +  + NT+++      R
Sbjct: 644 MIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRR 703

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF ++ + G   NV +Y ++I    K   +E A +++S M   G  P   + N 
Sbjct: 704 REEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLND 763

Query: 241 LFIGLFEIHQVERA 254
           +   L +   + +A
Sbjct: 764 IIRMLLQKGDIVKA 777



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 6/178 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   G   ++ TY  L+ GLCR   T  A+ LF ++        + CK +   
Sbjct: 637 AKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG------AMDCKFDITI 690

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T+I+ L K    ++A +LF  +    + PNV TY  +I          EA  +F  M 
Sbjct: 691 LNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSME 750

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             G  P+    N I+  L + G + +A   +  +    +   A   + LM  F   G+
Sbjct: 751 KSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGK 808


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 126/329 (38%), Positives = 193/329 (58%), Gaps = 6/329 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+++T++ LI      G    A+ +F EM     + GV  KP+ VTYTT+I  LC+ 
Sbjct: 393 GIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR----DHGV--KPDVVTYTTVIAALCRI 446

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F +M D+ + P+   Y+ LI GFC      +AK L +E+M+ G++ ++V F
Sbjct: 447 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFF 506

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I+N LCK G++ +A  + +L + +G  P+A VY+ LMDG+CL G++ +A  +F +M S
Sbjct: 507 SSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 566

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV  Y  L+NGYCK   I+  LSL+ EML KGIKP  ++YN +  GLF   +   
Sbjct: 567 AGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVP 626

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   F EM   G+A +   Y   + G  KN    EA+ LF+ LR +  ++DI   N +I 
Sbjct: 627 AKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 686

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           G+ ++ R++ A +LF S+ R  L+  VVT
Sbjct: 687 GMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/386 (32%), Positives = 196/386 (50%), Gaps = 39/386 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P+VF+Y+ L+  LC  G +  A +L   MA G    G VC P+ V YTT+ID   K
Sbjct: 180 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG----GAVCSPDVVAYTTVIDCFFK 235

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN----------------------- 109
           EG V+KA +LF +M    I P++VTY+S++H  C A                        
Sbjct: 236 EGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWT 295

Query: 110 ------------DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
                        W EA  +F EM    + P+VV+ N++M  LCK GK+ EA  + + M 
Sbjct: 296 YNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMA 355

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  P+ F Y  +++G+   G +    +LF  M   G   +++++S+LI  Y     ++
Sbjct: 356 MKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLD 415

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ +++EM   G+KPDVV Y T+   L  I +++ A + F++M   GVA D +AY   I
Sbjct: 416 KAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLI 475

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            G C +G +++A EL   +      LDI  ++ +I+ LCK GR+  A  +F         
Sbjct: 476 QGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQH 535

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
            D V Y++++   C  GKM+KA  +F
Sbjct: 536 PDAVVYSMLMDGYCLVGKMEKALRVF 561



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 192/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++R     P+V T N L+  LC+ G    A ++F+ MA   G+      P+  
Sbjct: 311 EAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVF 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +++G   +G +    +LF  M  + I P++ T++ LI  +      ++A  +F EM
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV+P+VV++  ++  LC+ GKMD+A      MI  GV P+ + Y+ L+ GFC  G +
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL + + + G + ++  +S +IN  CK   I  A +++   ++ G  PD V+Y+ L
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSML 544

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E+A ++FD M   G+  +   Y T ++G CK G I E + LFR +     
Sbjct: 545 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 604

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     YN +IDGL  +GR   A   F  +    +  +  TYNI++     +   D+A  
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIF 664

Query: 362 LFLDMEA 368
           LF ++ A
Sbjct: 665 LFKELRA 671



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A   ++   G  P+ +TYN LI G   TG    A+ +F+EM   +        P+ V
Sbjct: 276 KAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHS------ILPDVV 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   ++  LCK G + +A+++F  M  +  NP+V +Y  +++G+       +   LF  M
Sbjct: 330 TLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P++ +F+V++      G +D+A  +   M   GV+P+   Y T++   C  G++
Sbjct: 390 LGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKM 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E F  M   G   + ++Y  LI G+C +  +  A  L  E+++ G++ D+V ++++
Sbjct: 450 DDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSI 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L ++ ++  A  +FD     G   D   Y   +DG C  G + +A+ +F  +     
Sbjct: 510 INNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 569

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E ++  Y  L++G CK GR+     LFR + +  +    + YNI+I  L   G+   A+ 
Sbjct: 570 EPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKV 629

Query: 362 LFLDM 366
            F +M
Sbjct: 630 KFHEM 634



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 169/341 (49%), Gaps = 5/341 (1%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           C +G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++   
Sbjct: 87  CGSGPAL-AVALFNRAAS-RAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRT 144

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDE 148
            +  +++  N L+ GFC A   +EA  + +    + G  P+V S+++++  LC  GK  +
Sbjct: 145 GLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQ 204

Query: 149 ASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    P+   Y T++D F   G VN+A +LF  M   G   ++ +YS +
Sbjct: 205 ADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSV 264

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK + +  A +   +M++KG+ PD   YN L  G     Q + A ++F EM+RH +
Sbjct: 265 VHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 324

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D       +  LCK G I EA ++F T+ +     D+ +Y  +++G    G L    +
Sbjct: 325 LPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTD 384

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LF  +    +  D+ T++++I A    G +DKA  +F +M 
Sbjct: 385 LFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMR 425



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 128/266 (48%), Gaps = 41/266 (15%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L +++   G   ++  ++++IN LC+ G  + A N+F+   N      V   P+ 
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVN------VGQHPDA 538

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ ++DG C  G ++KA  +F  M    I PNVV Y +L++G+C     +E   LF E
Sbjct: 539 VVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFRE 598

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G++P+ + +N+I++ L   G+   A      M + G+  N   YN           
Sbjct: 599 MLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYN----------- 647

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
                                   I++ G+ KN+  + A+ L+ E+ +  +K D++  NT
Sbjct: 648 ------------------------IVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNT 683

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV 266
           +  G+F+  +VE A  LF  + R G+
Sbjct: 684 MIAGMFQTRRVEEAKDLFASISRSGL 709



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 121/247 (48%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R +  + N L+ GFC   R + A 
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSYSIL+   C   +   A  L   M   G    PDVV Y T+ 
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
              F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +      
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   YN LI G   +G+ K A  +F+ + R  ++ DVVT N+++ +LC  GK+ +ARD+
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 351 FDTMAMK 357


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 133/355 (37%), Positives = 194/355 (54%), Gaps = 9/355 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N+ T+N  INGLCR G    A +  E+M      +G+   PN VTY T++DG CK G   
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMK----AWGI--SPNVVTYNTLVDGYCKRGSAG 252

Query: 78  K--AKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           K    E F+K M    I PN VT+N+LI GFC   +   AK  F EM  QG++PN+V++N
Sbjct: 253 KMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYN 312

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N LC NGK++EA  L + M+ +G++PN   YN L++GFC    +  A ++F  +   
Sbjct: 313 SLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQ 372

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
               NV +++ +I+ YCK   +E   SL S ML +GI P+V  YN L  GL     ++ A
Sbjct: 373 ELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAA 432

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L +EM+  G+  D   Y   IDGLCKN     A +L   +  L  + +   YN L+DG
Sbjct: 433 KELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDG 492

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            C  G+LK A  +   + +     +VVTYN++I   C   K++ A  L  +M  K
Sbjct: 493 YCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEK 547



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/341 (34%), Positives = 189/341 (55%), Gaps = 11/341 (3%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHT---IVALNLFEEM-ANGNGEFGVVCKPNTVTYTT 65
           ++ +G  PNV TYNTL++G C+ G       A    +EM AN       +C PN VT+ T
Sbjct: 226 MKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANK------IC-PNEVTFNT 278

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK+  V  AK+ F +M+ + + PN+VTYNSLI+G C      EA  L+ +M+  G
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++PN+V++N ++N  CK   M EA+++ + + +  + PN   +NT++D +C  G +    
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L  SM   G   NV +Y+ LI G C+ ++++ A  L +EM +KG+K DVV YN L  GL
Sbjct: 399 SLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGL 458

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +   A KL +EM   G+  +   Y T +DG C  G +  A+ +   +   + + ++
Sbjct: 459 CKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNV 518

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             YN LI G CK  +L+ A  L   +    L  +  TY+I+
Sbjct: 519 VTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 102/304 (33%), Positives = 165/304 (54%), Gaps = 3/304 (0%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++  L KE  +   + ++ +M    I+ N+ T+N  I+G C A   N+A+    +M   G
Sbjct: 171 LLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWG 230

Query: 126 VQPNVVSFNVIMNELCKN---GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + PNVV++N +++  CK    GKM +A   ++ M+   + PN   +NTL+DGFC    V 
Sbjct: 231 ISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVA 290

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++ F  M+  G K N+ +Y+ LING C N ++E A+ L+ +M+  G+KP++V YN L 
Sbjct: 291 AAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALI 350

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +   ++ A K+FD++ +  +  +   + T ID  CK G + E   L  ++      
Sbjct: 351 NGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGIL 410

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  YNCLI GLC+   L+ A EL   +    L  DVVTYNI+I  LC + K   A  L
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470

Query: 363 FLDM 366
             +M
Sbjct: 471 LNEM 474



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 145/246 (58%), Gaps = 6/246 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ K+   G +PN+ TYN LING C+      A  +F++++           PN +
Sbjct: 326 EAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQE------LVPNVI 379

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+ID  CKEG +++   L   M DE I PNV TYN LI G C   D   AK L  EM
Sbjct: 380 TFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEM 439

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ +VV++N++++ LCKN K   A +LL  M  +G++PN   YNTLMDG+C+ G++
Sbjct: 440 ENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKL 499

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   ME    + NV +Y++LI GYCK  ++E A  L +EML KG+ P+   Y+ +
Sbjct: 500 KAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559

Query: 242 FIGLFE 247
            + + E
Sbjct: 560 RLEMLE 565



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 6/142 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G + +V TYN LI+GLC+   +  A  L  EM      F +  KPN VT
Sbjct: 432 AKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEM------FNLGLKPNHVT 485

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++DG C EG +  A  +  +M+ E   PNVVTYN LI G+C  N    A  L  EM+
Sbjct: 486 YNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEML 545

Query: 123 DQGVQPNVVSFNVIMNELCKNG 144
           ++G+ PN  +++++  E+ + G
Sbjct: 546 EKGLNPNRTTYDIVRLEMLEKG 567



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 116/238 (48%), Gaps = 12/238 (5%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRP--NAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++   KN K   +S    L++  G RP   A + + L+  +     ++ A E F   +  
Sbjct: 101 LDSFVKNEKHTVSSVFHSLLLD-GGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDY 159

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G K ++ S + L++   K  +I     +Y EM+ + I  ++  +N    GL    ++ +A
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR------AY 308
               ++M+  G++ +   Y T +DG CK G    A ++++    +K  L  +       +
Sbjct: 220 EDAIEDMKAWGISPNVVTYNTLVDGYCKRG---SAGKMYKAEAFMKEMLANKICPNEVTF 276

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N LIDG CK   +  A + F  + +  L  ++VTYN +I+ LC +GK+++A DL+  M
Sbjct: 277 NTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKM 334



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 3/168 (1%)

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +L+  Y KN E+  A   ++     G K  +   N L   L + +++     ++ EM + 
Sbjct: 135 MLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKR 194

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK---SGRL 321
            +  +   +  FI+GLC+ G + +A +    ++      ++  YN L+DG CK   +G++
Sbjct: 195 RIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKM 254

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             A    + +    +  + VT+N +I   C D  +  A+  F +M+ +
Sbjct: 255 YKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQ 302


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 205/367 (55%), Gaps = 7/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   G +P+  T+ TL++GL +      A+ L E M          C+P+ V
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLV 216

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLCK G  D A  L  KM+   I  +VV YN++I G C     ++A  LF +M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+V ++N +++ LC  G+  +ASRLL  M++  + P+   +N L+D F   G++
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336

Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             AE+L+  M +S  C  +V +Y+ LI G+CK K +E  + ++ EM  +G+  + V Y T
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G F+    + A  +F +M   GV  D   Y   +DGLC NG +  A+ +F  ++   
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +LDI  Y  +I+ LCK+G+++  W+LF SL    +  +VVTY  M+   C  G  ++A 
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516

Query: 361 DLFLDME 367
            LF++M+
Sbjct: 517 ALFVEMK 523



 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 201/368 (54%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++ V GC+P++ TY  +INGLC+ G   +ALNL  +M  G  E       + V
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------ADVV 251

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TIIDGLCK   +D A +LF KM+ + I P+V TYN LI   C    W++A  L  +M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
           +++ + P++V FN +++   K GK+ EA +L + M++     P+   YNTL+ GFC   R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    E+F  M   G   N  +Y+ LI+G+ + ++ + A  ++ +M+S G+ PD++ YN 
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL     VE A  +F+ MQ+  +  D   Y T I+ LCK G + +  +LF +L +  
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + ++  Y  ++ G C+ G  + A  LF  +     + +  TYN +I A   DG    + 
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551

Query: 361 DLFLDMEA 368
           +L  +M +
Sbjct: 552 ELIKEMRS 559



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 190/368 (51%), Gaps = 7/368 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A+  K+   G  P++ T N+L+NG C       A+ L ++M     E G   +P+TVT
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV----EMGY--QPDTVT 182

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT++ GL +     +A  L  +M  +   P++VTY ++I+G C   + + A  L  +M 
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              ++ +VV +N I++ LCK   MD+A  L   M   G++P+ F YN L+   C  GR +
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYNTL 241
            A  L   M       ++  ++ LI+ + K  ++  A  LY EM+ SK   PDVV YNTL
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +VE   ++F EM + G+  +T  Y T I G  +      A  +F+ +     
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN L+DGLC +G ++ A  +F  + +  +  D+VTY  MI ALC  GK++   D
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482

Query: 362 LFLDMEAK 369
           LF  +  K
Sbjct: 483 LFCSLSLK 490



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 161/325 (49%), Gaps = 8/325 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G +P+VFTYN LI+ LC  G    A  L  +M   N        P+ V
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN------INPDLV 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +  +ID   KEG + +A++L+ +M K ++  P+VV YN+LI GFC      E   +F E
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+  N V++  +++   +    D A  + + M+  GV P+   YN L+DG C  G 
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  +F  M+    K ++ +Y+ +I   CK  ++E    L+  +  KG+KP+VV Y T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G       E A  LF EM+  G   ++  Y T I    ++G    + EL + +R   
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D   +  L+  +   GRL  ++
Sbjct: 562 FAGDASTFG-LVTNMLHDGRLDKSF 585



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/325 (28%), Positives = 167/325 (51%), Gaps = 5/325 (1%)

Query: 50  GEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           G FG + K    P+ V ++ ++  + K    D    L  +M++  I+ N+ TY+  I+ F
Sbjct: 61  GLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYF 120

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C  +  + A  +  +MM  G  P++V+ N ++N  C   ++ EA  L++ M+++G +P+ 
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             + TL+ G     + + A  L   M   GC+ ++ +Y  +ING CK  E + AL+L ++
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M    I+ DVVIYNT+  GL +   ++ AF LF++M+  G+  D + Y   I  LC  G 
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYN 344
             +A  L   +       D+  +N LID   K G+L  A +L+  + +      DVV YN
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +I   C   ++++  ++F +M  +
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQR 385



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 152/291 (52%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  LF  M      P++V ++ L+      N ++    L  +M + G+  N+ ++++
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
            +N  C+  ++  A  +L  M+++G  P+    N+L++GFC   R++ A  L   M  MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +  +++ L++G  ++ +   A++L   M+ KG +PD+V Y  +  GL +  + + A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L ++M++  + AD   Y T IDGLCK  ++ +A +LF  +     + D+  YN LI  L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C  GR   A  L   +    +  D+V +N +I A   +GK+ +A  L+ +M
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 130/258 (50%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           ++A  LF +M+     P++V F+ +++ + K  K D    L E M  +G+  N + Y+  
Sbjct: 57  DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ FC   +++ A  +   M  +G   ++ + + L+NG+C    I  A++L  +M+  G 
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +PD V + TL  GLF+ ++   A  L + M   G   D   Y   I+GLCK G    A+ 
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +   K E D+  YN +IDGLCK   +  A++LF  +    +  DV TYN +I  LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296

Query: 352 ADGKMDKARDLFLDMEAK 369
             G+   A  L  DM  K
Sbjct: 297 NYGRWSDASRLLSDMLEK 314



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 115/225 (51%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+D+A  L   M++    P+   ++ L+       + +    L   M+++G  HN+++YS
Sbjct: 55  KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           I IN +C+  ++  AL++  +M+  G  P +V  N+L  G    +++  A  L D+M   
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   DT  + T + GL ++    EAV L   + +   + D+  Y  +I+GLCK G   +A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L   + +G + ADVV YN +I  LC    MD A DLF  ME K
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 198/355 (55%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N LIN   R G    A+ +FE+M N     G++  P+TVT+ T+I  LC+ 
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRI 450

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS- 132
           G +D A   F  M D  + P+   Y  LI G C   +  +AK L  EMM++ + P  V  
Sbjct: 451 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 510

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F+ I+N LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A  L  +M 
Sbjct: 511 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 570

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+Y+ +  GLF+  +  
Sbjct: 571 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 630

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A K+F EM   G       Y   + GLC+N    EA  L   L  +  + DI  +N +I
Sbjct: 631 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 690

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+ +E
Sbjct: 691 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 745



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 205/407 (50%), Gaps = 52/407 (12%)

Query: 3   AAALFMKLRVFGCE----PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCK 57
           A  LF ++  + C     P + TYN LI+   R     + L +   +  NG G       
Sbjct: 136 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 188

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  +Y+ +I G  K+G VDKA  LFL+M ++ + P ++  NS+I   C   + ++A+ +
Sbjct: 189 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 247

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+D G+ P++ ++++I++ LCK+  MD+A R+LE M++ G RPN+  YN+L+ G+ +
Sbjct: 248 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 307

Query: 178 T-----------------------------------GRVNRAEELFVSMESMGCKHNVFS 202
           +                                   GR N A+ +F SM   G K ++ S
Sbjct: 308 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 367

Query: 203 YSILINGYCKNKE--IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           YS +++GY    +  +    ++++ ML+KGI P+  ++N L         +++A  +F++
Sbjct: 368 YSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFED 427

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           MQ  G+  DT  + T I  LC+ G + +A+  F  +  +        Y CLI G C  G 
Sbjct: 428 MQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGE 487

Query: 321 LKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L  A EL    + + +    V  ++ +I+ LC +G++ + +D+ +DM
Sbjct: 488 LVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI-MDM 533



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 191/370 (51%), Gaps = 9/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+++   G  P +   N++I  LC+      A ++ ++M +     G+   P+  
Sbjct: 208 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLF 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ IIDGLCK   +DKA+ +  +M +    PN +TYNSLIHG+  +  WNE+  +F +M
Sbjct: 262 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P V + N  ++ L K+G+ +EA  + + M+  G +P+   Y+T++ G+      
Sbjct: 322 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 381

Query: 182 NRAE--ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
             A+   +F  M + G   N   ++ILIN Y +   ++ A+ ++ +M +KG+ PD V + 
Sbjct: 382 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 441

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T+   L  I +++ A   F+ M   GV      Y   I G C +G +V+A EL   +   
Sbjct: 442 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 501

Query: 300 KYELD-IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                 ++ ++ +I+ LCK GR+    ++   + +     +VVT+N ++   C  G M++
Sbjct: 502 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 561

Query: 359 ARDLFLDMEA 368
           A  L   M +
Sbjct: 562 AFALLDAMAS 571



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 5/300 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCK
Sbjct: 466 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCK 520

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V + K++   M      PNVVT+NSL+ G+C   +  EA  L   M   G++PN   
Sbjct: 521 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 580

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  CKNG++D+A  +   M+  GV+P + +Y+ ++ G     R   A+++F  M 
Sbjct: 581 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 640

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y +++ G C+N   + A  L  ++ +  +K D++ +N +   +F++ + +
Sbjct: 641 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 700

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +LFD +  +G+  +   Y   I  L K     EA  LF ++    +  D R  N ++
Sbjct: 701 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 760


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 198/355 (55%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N LIN   R G    A+ +FE+M N     G++  P+TVT+ T+I  LC+ 
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRI 394

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS- 132
           G +D A   F  M D  + P+   Y  LI G C   +  +AK L  EMM++ + P  V  
Sbjct: 395 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 454

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F+ I+N LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A  L  +M 
Sbjct: 455 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 514

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+Y+ +  GLF+  +  
Sbjct: 515 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 574

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A K+F EM   G       Y   + GLC+N    EA  L   L  +  + DI  +N +I
Sbjct: 575 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 634

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+ +E
Sbjct: 635 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 689



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 198/389 (50%), Gaps = 48/389 (12%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P + TYN LI+   R     + L +   +  NG G       P+  +Y+ +I G  K+G 
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG-------PDDFSYS-LIYGFVKDGE 149

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VDKA  LFL+M ++ + P ++  NS+I   C   + ++A+ +  +M+D G+ P++ ++++
Sbjct: 150 VDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSL 209

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT----------------- 178
           I++ LCK+  MD+A R+LE M++ G RPN+  YN+L+ G+ ++                 
Sbjct: 210 IIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCG 269

Query: 179 ------------------GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE--IEG 218
                             GR N A+ +F SM   G K ++ SYS +++GY    +  +  
Sbjct: 270 VIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLAD 329

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             ++++ ML+KGI P+  ++N L         +++A  +F++MQ  G+  DT  + T I 
Sbjct: 330 VHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVIS 389

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLI 337
            LC+ G + +A+  F  +  +        Y CLI G C  G L  A EL    + + +  
Sbjct: 390 SLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPP 449

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
             V  ++ +I+ LC +G++ + +D+ +DM
Sbjct: 450 PGVKYFSSIINNLCKEGRVAEGKDI-MDM 477



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 189/370 (51%), Gaps = 9/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+++   G  P +   N++I  LC+      A ++ ++M +          P+  
Sbjct: 152 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG------IAPDLF 205

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ IIDGLCK   +DKA+ +  +M +    PN +TYNSLIHG+  +  WNE+  +F +M
Sbjct: 206 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 265

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P V + N  ++ L K+G+ +EA  + + M+  G +P+   Y+T++ G+      
Sbjct: 266 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 325

Query: 182 NRAE--ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
             A+   +F  M + G   N   ++ILIN Y +   ++ A+ ++ +M +KG+ PD V + 
Sbjct: 326 CLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFA 385

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T+   L  I +++ A   F+ M   GV      Y   I G C +G +V+A EL   +   
Sbjct: 386 TVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNK 445

Query: 300 KYELD-IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                 ++ ++ +I+ LCK GR+    ++   + +     +VVT+N ++   C  G M++
Sbjct: 446 DIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEE 505

Query: 359 ARDLFLDMEA 368
           A  L   M +
Sbjct: 506 AFALLDAMAS 515



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 150/300 (50%), Gaps = 5/300 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCK
Sbjct: 410 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCK 464

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V + K++   M      PNVVT+NSL+ G+C   +  EA  L   M   G++PN   
Sbjct: 465 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 524

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  CKNG++D+A  +   M+  GV+P + +Y+ ++ G     R   A+++F  M 
Sbjct: 525 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 584

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y +++ G C+N   + A  L  ++ +  +K D++ +N +   +F++ + +
Sbjct: 585 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 644

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +LFD +  +G+  +   Y   I  L K     EA  LF ++    +  D R  N ++
Sbjct: 645 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 704


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  230 bits (586), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 128/361 (35%), Positives = 197/361 (54%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L ++LR FG  PNV  Y TLI+G C+ G    A +LF EM    G+FG+V   N  TYT 
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEM----GKFGLVA--NEWTYTV 238

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL K G   +  E++ KM+++ + PN+ TYN +++  C      +A  LF EM ++G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERG 298

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V  N+V++N ++  LC+  K +EA+++++ M   G+ PN   YNTL+DGFC  G++ +A 
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   ++S G   ++ +Y+IL++G+CK  +  GA  +  EM  +GIKP  + Y  L    
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTF 418

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             +  +E+A +L   M+  G+  D   Y   I G C  G + EA  LF+ +   K E + 
Sbjct: 419 ARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNK 478

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN ++ G CK G    A  LFR +    L  +V +Y  MI  LC + K  +A  L   
Sbjct: 479 VIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538

Query: 366 M 366
           M
Sbjct: 539 M 539



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/323 (31%), Positives = 169/323 (52%), Gaps = 41/323 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGL-------------------------------- 29
           +A  LF ++  FG   N +TY  LI+GL                                
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 30  ---CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
              C+ G T  A  LF+EM     E GV C  N VTY T+I GLC+E   ++A ++  +M
Sbjct: 276 NQHCKDGRTKDAFKLFDEMR----ERGVSC--NIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           K + INPN++TYN+LI GFC      +A  L  ++  +G+ P++V++N++++  CK G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
             A ++++ M + G++P+   Y  L+D F     + +A +L   ME +G   +V +YS+L
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+C   ++  A  L+  M++K ++P+ VIYNT+ +G  +     RA +LF EM+   +
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 267 AADTWAYRTFIDGLCKNGYIVEA 289
             +  +YR  I+ LCK     EA
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEA 532



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 143/265 (53%), Gaps = 6/265 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++R  G   N+ TYNTLI GLCR      A  + ++M +          PN +
Sbjct: 286 DAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDG------INPNLI 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG C  G + KA  L   +K   ++P++VTYN L+ GFC   D + A  +  EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+ +++ ++++   +   M++A +L   M ++G+ P+   Y+ L+ GFC+ G++
Sbjct: 400 EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQM 459

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  LF  M +   + N   Y+ ++ GYCK      AL L+ EM  K + P+V  Y  +
Sbjct: 460 NEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
              L +  + + A  L ++M   G+
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDTGI 544



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 155/307 (50%), Gaps = 1/307 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+   +   +D +   F +M D+   P    +N+L+     ++ +N+    F E  
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V  +V SF +++   C+ G+++++  LL  + + G  PN  +Y TL+DG C  G + 
Sbjct: 157 IK-VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIE 215

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A++LF  M   G   N ++Y++LI+G  KN   +    +Y +M   G+ P++  YN + 
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +  + + AFKLFDEM+  GV+ +   Y T I GLC+     EA ++   ++     
Sbjct: 276 NQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGIN 335

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  YN LIDG C  G+L  A  L R L    L   +VTYNI++   C  G    A  +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 363 FLDMEAK 369
             +ME +
Sbjct: 396 VKEMEER 402



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 174/383 (45%), Gaps = 42/383 (10%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y  +IN   ++     +++ F EM +     G  C  N +T+      +    F    + 
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFV-----VGSSSFNQWWR- 150

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
            F       ++ +V ++  +I G C A +  ++  L +E+ + G  PNVV +  +++  C
Sbjct: 151 -FFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G++++A  L   M + G+  N + Y  L+ G    G   +  E++  M+  G   N++
Sbjct: 210 KRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLY 269

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ ++N +CK+   + A  L+ EM  +G+  ++V YNTL  GL    +   A K+ D+M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           +  G+  +   Y T IDG C  G + +A+ L R L+       +  YN L+ G CK G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 322 KIAWELFRSL-PRGV----------------------------------LIADVVTYNIM 346
             A ++ + +  RG+                                  L  DV TY+++
Sbjct: 390 SGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 347 IHALCADGKMDKARDLFLDMEAK 369
           IH  C  G+M++A  LF  M AK
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAK 472



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 128/238 (53%), Gaps = 6/238 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  +++  G  PN+ TYNTLI+G C  G    AL+L  ++ +          P+ V
Sbjct: 321 EANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG------LSPSLV 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G CK+G    A ++  +M++  I P+ +TY  LI  F   ++  +A  L   M
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+V +++V+++  C  G+M+EASRL +LM+   + PN  +YNT++ G+C  G  
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSS 494

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            RA  LF  ME      NV SY  +I   CK ++ + A  L  +M+  GI P   I N
Sbjct: 495 YRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILN 552



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 137/281 (48%), Gaps = 21/281 (7%)

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI-------- 159
            N ++ A+ L ++++   +Q    + + +++ + ++   +  SRL E+MI          
Sbjct: 52  GNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLD 111

Query: 160 ------------GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
                       G  P +  +N L+     +   N+    F +   +    +V+S+ I+I
Sbjct: 112 SSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFF-NESKIKVDLDVYSFGIVI 170

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G C+  EIE +  L  E+   G  P+VVIY TL  G  +  ++E+A  LF EM + G+ 
Sbjct: 171 KGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLV 230

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
           A+ W Y   I GL KNG   +  E++  ++      ++  YNC+++  CK GR K A++L
Sbjct: 231 ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKL 290

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           F  +    +  ++VTYN +I  LC + K ++A  +   M++
Sbjct: 291 FDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS 331


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/358 (34%), Positives = 194/358 (54%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+   G +P+ FTY +LI G C+      A  +F EM          C+ N V
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG------CRRNEV 289

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +I GLC    +D+A +LF+KMKD+   P V TY  LI   C +   +EA  L  EM
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PN+ ++ V+++ LC   K ++A  LL  M++ G+ PN   YN L++G+C  G +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   MES     N  +Y+ LI GYCK+  +  A+ + ++ML + + PDVV YN+L
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSL 468

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G       + A++L   M   G+  D W Y + ID LCK+  + EA +LF +L     
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y  LIDG CK+G++  A  +   +     + + +T+N +IH LCADGK+ +A
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 180/353 (50%), Gaps = 7/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN++TYN ++NG C+ G+   A     ++     E G+   P+  TYT++I G C+   +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIV----EAGL--DPDFFTYTSLIMGYCQRKDL 269

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A ++F +M  +    N V Y  LIHG C A   +EA  LF++M D    P V ++ V+
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC + +  EA  L++ M + G++PN   Y  L+D  C   +  +A EL   M   G 
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV +Y+ LINGYCK   IE A+ +   M S+ + P+   YN L  G  +   V +A  
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMG 448

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + ++M    V  D   Y + IDG C++G    A  L   +       D   Y  +ID LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           KS R++ A +LF SL +  +  +VV Y  +I   C  GK+D+A  +   M +K
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 185/365 (50%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF+K++   C P V TY  LI  LC +     ALNL +EM     E G+  KPN  
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME----ETGI--KPNIH 359

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +ID LC +   +KA+EL  +M ++ + PNV+TYN+LI+G+C      +A  +   M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PN  ++N ++   CK+  + +A  +L  M++  V P+   YN+L+DG C +G  
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   + ++Y+ +I+  CK+K +E A  L+  +  KG+ P+VV+Y  L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +V+ A  + ++M       ++  +   I GLC +G + EA  L   +  +  
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +     LI  L K G    A+  F+ +       D  TY   I   C +G++  A D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658

Query: 362 LFLDM 366
           +   M
Sbjct: 659 MMAKM 663



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/330 (31%), Positives = 172/330 (52%), Gaps = 7/330 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV TYN LING C+ G    A+++ E M +          PNT 
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTR 429

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G CK   V KA  +  KM +  + P+VVTYNSLI G C + +++ A  L   M
Sbjct: 430 TYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P+  ++  +++ LCK+ +++EA  L + + Q GV PN  +Y  L+DG+C  G+V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M S  C  N  +++ LI+G C + +++ A  L  +M+  G++P V     L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +    + A+  F +M   G   D   Y TFI   C+ G +++A ++   +R    
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
             D+  Y+ LI G    G+   A+++ + +
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 175/346 (50%), Gaps = 3/346 (0%)

Query: 19  VFTYNTLINGLCRT-GHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           VF    L+   C + G  +  L+L  +M N +  F +  K     Y T+++ L + G VD
Sbjct: 142 VFKIRLLMIKSCDSVGDALYVLDLCRKM-NKDERFELKYKLIIGCYNTLLNSLARFGLVD 200

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           + K+++++M ++ + PN+ TYN +++G+C   +  EA     ++++ G+ P+  ++  ++
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
              C+   +D A ++   M   G R N   Y  L+ G C+  R++ A +LFV M+   C 
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             V +Y++LI   C ++    AL+L  EM   GIKP++  Y  L   L    + E+A +L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             +M   G+  +   Y   I+G CK G I +AV++   +   K   + R YN LI G CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           S   K    L + L R VL  DVVTYN +I   C  G  D A  L 
Sbjct: 441 SNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDSAYRLL 485



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 188/370 (50%), Gaps = 27/370 (7%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYN+LI+G CR+G+   A  L   M     + G+V  P+  TYT++ID LCK   V
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLM----NDRGLV--PDQWTYTSMIDSLCKSKRV 513

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A +LF  ++ + +NPNVV Y +LI G+C A   +EA  +  +M+ +   PN ++FN +
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC +GK+ EA+ L E M++IG++P       L+      G  + A   F  M S G 
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +  +Y+  I  YC+   +  A  + ++M   G+ PD+  Y++L  G  ++ Q   AF 
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693

Query: 257 LFDEMQRHGVAADTWAYRTFIDG---------------LCKNGYIVE---AVELFRTLRI 298
           +   M+  G       + + I                 LC    ++E    VEL   +  
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKM 356
                + ++Y  LI G+C+ G L++A ++F  + R  G+  +++V +N ++   C   K 
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV-FNALLSCCCKLKKH 812

Query: 357 DKARDLFLDM 366
           ++A  +  DM
Sbjct: 813 NEAAKVVDDM 822



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 183/408 (44%), Gaps = 60/408 (14%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ +TY ++I+ LC++     A +LF+ +     + GV   PN V YT +IDG CK 
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE----QKGV--NPNVVMYTALIDGYCKA 545

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD+A  +  KM  +N  PN +T+N+LIHG C      EA  L  +M+  G+QP V + 
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++++ L K+G  D A    + M+  G +P+A  Y T +  +C  GR+  AE++   M  
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665

Query: 194 MGCKHNVFSYSILING----------------------------------------YCKN 213
            G   ++F+YS LI G                                        Y K 
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725

Query: 214 K-------------EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           K             E +  + L  +M+   + P+   Y  L +G+ E+  +  A K+FD 
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785

Query: 261 MQRH-GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           MQR+ G++     +   +   CK     EA ++   +  + +   + +   LI GL K G
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             +    +F++L +     D + + I+I  +   G ++   +LF  ME
Sbjct: 846 EKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 155/332 (46%), Gaps = 25/332 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G +P V T   LI+ L + G    A + F++M +         KP+  
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG------TKPDAH 638

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT I   C+EG +  A+++  KM++  ++P++ TY+SLI G+      N A  +   M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698

Query: 122 MDQGVQPNVVSFNVIMN---------------ELCKNGKM---DEASRLLELMIQIGVRP 163
            D G +P+  +F  ++                ELC    M   D    LLE M++  V P
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           NA  Y  L+ G C  G +  AE++F  M+ + G   +   ++ L++  CK K+   A  +
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             +M+  G  P +     L  GL++  + ER   +F  + + G   D  A++  IDG+ K
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            G +    ELF  +     +   + Y+ LI+G
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 121/237 (51%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++N L + G +DE  ++   M++  V PN + YN +++G+C  G V  A +    + 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   + F+Y+ LI GYC+ K+++ A  +++EM  KG + + V Y  L  GL    +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  LF +M+          Y   I  LC +    EA+ L + +     + +I  Y  LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D LC   + + A EL   +    L+ +V+TYN +I+  C  G ++ A D+   ME++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 25/263 (9%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  +  K+R  G  P++FTY++LI G    G T  A ++ + M +        C+P+ 
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG------CEPSQ 707

Query: 61  VTYTTIIDGLCKEGF------------------VDKAKELFLKMKDENINPNVVTYNSLI 102
            T+ ++I  L +  +                   D   EL  KM + ++ PN  +Y  LI
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767

Query: 103 HGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
            G C   +   A+ +F  M  ++G+ P+ + FN +++  CK  K +EA+++++ MI +G 
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P       L+ G    G   R   +F ++   G   +  ++ I+I+G  K   +E    
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887

Query: 222 LYSEMLSKGIKPDVVIYNTLFIG 244
           L++ M   G K     Y+ L  G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/355 (35%), Positives = 198/355 (55%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N LIN   R G    A+ +FE+M N     G++  P+TVT+ T+I  LC+ 
Sbjct: 418 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRI 471

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS- 132
           G +D A   F  M D  + P+   Y  LI G C   +  +AK L  EMM++ + P  V  
Sbjct: 472 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 531

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F+ I+N LCK G++ E   ++++M+Q G RPN   +N+LM+G+CL G +  A  L  +M 
Sbjct: 532 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 591

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+Y+ +  GLF+  +  
Sbjct: 592 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTT 651

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A K+F EM   G       Y   + GLC+N    EA  L   L  +  + DI  +N +I
Sbjct: 652 AAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 711

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             + K GR + A ELF ++    L+ ++ TY++MI  L  +   ++A +LF+ +E
Sbjct: 712 SAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 766



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 201/408 (49%), Gaps = 53/408 (12%)

Query: 3   AAALFMKLRVFGCE----PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCK 57
           A  LF ++  + C     P + TYN LI+   R     + L +   +  NG G       
Sbjct: 156 AIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLG------- 208

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  +Y+ +I G  K+G VDKA  LFL+M ++ + P ++  NS+I   C   + ++A+ +
Sbjct: 209 PDDFSYS-LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESI 267

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+D G+ P++ ++++I++ LCK+  MD+A R+LE M++ G RPN+  YN+L+ G+ +
Sbjct: 268 VQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSI 327

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           +G  N +  +F  M S G    V + +  I+   K+     A  ++  M+ KG KPD++ 
Sbjct: 328 SGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIIS 387

Query: 238 YNT---------------LFIGLFEI-----------------------HQVERAFKLFD 259
           Y+T               ++  +F +                         +++A  +F+
Sbjct: 388 YSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFE 447

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +MQ  G+  DT  + T I  LC+ G + +A+  F  +  +        Y CLI G C  G
Sbjct: 448 DMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHG 507

Query: 320 RLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            L  A EL    + + +    V  ++ +I+ LC +G++ + +D+ +DM
Sbjct: 508 ELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDI-MDM 554



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 188/371 (50%), Gaps = 10/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+++   G  P +   N++I  LC+      A ++ ++M +     G+   P+  
Sbjct: 228 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDS----GIA--PDLF 281

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ IIDGLCK   +DKA+ +  +M +    PN +TYNSLIHG+  +  WNE+  +F +M
Sbjct: 282 TYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM 341

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC---LT 178
              GV P V + N  ++ L K+G+ +EA  + + M+  G +P+   Y+T     C   +T
Sbjct: 342 SSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVT 401

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
                   +F  M + G   N   ++ILIN Y +   ++ A+ ++ +M +KG+ PD V +
Sbjct: 402 VVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTF 461

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            T+   L  I +++ A   F+ M   GV      Y   I G C +G +V+A EL   +  
Sbjct: 462 ATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMN 521

Query: 299 LKYELD-IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  ++ ++ +I+ LCK GR+    ++   + +     +VVT+N ++   C  G M+
Sbjct: 522 KDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNME 581

Query: 358 KARDLFLDMEA 368
           +A  L   M +
Sbjct: 582 EAFALLDAMAS 592



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 184/404 (45%), Gaps = 45/404 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++  K+   G  P++FTY+ +I+GLC++     A  + E+M           +PN++
Sbjct: 263 KAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAG------TRPNSI 316

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I G    G  +++  +F +M    + P V   NS IH        NEAKC+F  M
Sbjct: 317 TYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSM 376

Query: 122 MDQGVQPNVVS--------------------------------------FNVIMNELCKN 143
           + +G +P+++S                                      FN+++N   + 
Sbjct: 377 VLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARC 436

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           G MD+A  + E M   G+ P+   + T++   C  GR++ A   F  M  +G   +   Y
Sbjct: 437 GMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVY 496

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY-NTLFIGLFEIHQVERAFKLFDEMQ 262
             LI G C + E+  A  L SEM++K I P  V Y +++   L +  +V     + D M 
Sbjct: 497 GCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMV 556

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           + G   +   + + ++G C  G + EA  L   +  +  E +   Y  L+DG CK+GR+ 
Sbjct: 557 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 616

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A  +FR +    +    V Y+I++H L    +   A+ +F +M
Sbjct: 617 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEM 660



 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 163/343 (47%), Gaps = 5/343 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +++II+ LCK
Sbjct: 487 IGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLCK 541

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V + K++   M      PNVVT+NSL+ G+C   +  EA  L   M   G++PN   
Sbjct: 542 EGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYI 601

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  CKNG++D+A  +   M+  GV+P + +Y+ ++ G     R   A+++F  M 
Sbjct: 602 YGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMI 661

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y +++ G C+N   + A  L  ++ +  +K D++ +N +   +F++ + +
Sbjct: 662 ESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQ 721

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +LFD +  +G+  +   Y   I  L K     EA  LF ++    +  D R  N ++
Sbjct: 722 EAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIV 781

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
             L     +  A      +    L  +  T +++      +GK
Sbjct: 782 RMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGK 824


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/362 (35%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   GC PN  ++NT+I GLC+      A  +F EM   +        P++ 
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD------IPPDSW 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +IDGL K G +++A +LF +M D  I P+ VTYN +IHG C A   +EA  LF  M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+  +FN++++  CK GKMDEA RLL+ M   G  P+   Y+TL+ G C   RV
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M    CK  V + + LI+G CK   I+ A  +   M+S G  PDVV YNTL
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     Q ERA +L  +M   G+A +   Y   + GLCK   + EA  +F  ++    
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y  LI G C +G++    +LF  +    +  D V Y  +   LC  G+  +A +
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 486

Query: 362 LF 363
           + 
Sbjct: 487 IL 488



 Score =  227 bits (579), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 115/309 (37%), Positives = 179/309 (57%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P++ +Y  +IDGL K G ++ A++LF K+    + P+ V Y SLIHG C AN +++A+ L
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M  +G  P+ V++NVI++  CK G ++EA  L++ MI+ G  P+   YNT+MDG C 
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           +GRV  A  LF  ME +GC  N  S++ +I G C+  +I+ A  ++ EM ++ I PD   
Sbjct: 128 SGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWS 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  GL +  ++  A+KLF  M   G+      Y   I G+C    + EA+ELF+++R
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                     +N LID  CK G++  A+ L + +     + DVVTY+ +I  LC+  ++D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 358 KARDLFLDM 366
            AR L  DM
Sbjct: 308 DARHLLEDM 316



 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 202/367 (55%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   GC P+  TYN +I+  C+ G    A +L ++M     E G V  P+ V
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI----EDGHV--PDVV 116

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++DGLCK G V++A  LF +M+     PN  ++N++I G C  +  ++A  +F EM
Sbjct: 117 TYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+  S+ ++++ L K GK++EA +L   M+  G+ P+A  YN ++ G CL   +
Sbjct: 177 EARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTL 236

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF SM S GC+ + F+++ILI+ +CK  +++ A  L   M   G  PDVV Y+TL
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  I +V+ A  L ++M +           T I GLCK G I EA E+   +     
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN L+ G C++G+ + A EL   +    L  +VVTY  ++  LC   ++ +A  
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416

Query: 362 LFLDMEA 368
           +F  M++
Sbjct: 417 VFAQMKS 423



 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 192/368 (52%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF KL   G  P+   Y +LI+GLC       A  LF +M N  G     C P+ V
Sbjct: 28  DARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRG-----CPPSPV 81

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  IID  CK G +++A +L  KM ++   P+VVTYN+++ G C +    EA  LF EM
Sbjct: 82  TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM 141

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN  S N I+  LC+  K+D+A ++   M    + P+++ Y  L+DG    G++
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKL 201

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A +LF  M   G   +  +Y+++I+G C    ++ AL L+  M SKG +P    +N L
Sbjct: 202 NEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +  +++ AF+L   M   G   D   Y T I GLC    + +A  L   +   + 
Sbjct: 262 IDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +   N LI GLCK+GR+K A E+  ++       DVVTYN ++H  C  G+ ++AR+
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381

Query: 362 LFLDMEAK 369
           L  DM A+
Sbjct: 382 LLSDMVAR 389



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G  P+V TYNT+++GLC++G    AL LF EM        + C PN  
Sbjct: 98  EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMER------LGCTPNRR 151

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ TII GLC++  +D+A ++F +M+  +I P+  +Y  LI G   A   NEA  LF  M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRM 211

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ V++NV+++ +C    +DEA  L + M   G RP+ F +N L+D  C  G++
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKM 271

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   +V +YS LI+G C    ++ A  L  +M+ +  KP VV  NTL
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A ++ D M   G + D   Y T + G C+ G    A EL   +     
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y  L+ GLCK+ RL  A  +F  +       ++ TY  +I   C+ G++D    
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451

Query: 362 LFLDM 366
           LF +M
Sbjct: 452 LFGEM 456



 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 189/361 (52%), Gaps = 8/361 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P+  TYN +I+G+C       AL LF+ M +        C+P+  
Sbjct: 203 EAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG------CRPSRF 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID  CK G +D+A  L  +M D+   P+VVTY++LI G C     ++A+ L  +M
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  +P VV+ N +++ LCK G++ EA  +L+ M+  G  P+   YNTL+ G C  G+ 
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA EL   M + G   NV +Y+ L++G CK   +  A  ++++M S G  P++  Y  L
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-ILK 300
            +G     QV+   KLF EM   G++ D   Y T    LCK+G    A+E+ R  R  L+
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496

Query: 301 YEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            E      Y   +DGL  +G++++A    R + RG  +        ++  LC  G+  +A
Sbjct: 497 SEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556

Query: 360 R 360
           R
Sbjct: 557 R 557



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 162/338 (47%), Gaps = 45/338 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +R  GC P+ FT+N LI+  C+ G    A  L + M + +G       P+ V
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD-DGHV-----PDVV 291

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+I GLC    VD A+ L   M      P VVT N+LIHG C A    EA+ +   M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++N +++  C+ G+ + A  LL  M+  G+ PN   Y  L+ G C   R+
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M+S GC  N+F+Y+ LI G+C   +++G L L+ EM+  GI PD V+Y TL
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWA---YRTFIDG------------------- 279
              L +  +  RA ++  E  R  + ++ W    YR  +DG                   
Sbjct: 472 AAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVR 530

Query: 280 ----------------LCKNGYIVEAVELFRTLRILKY 301
                           LCK+G   EA  +   +  L Y
Sbjct: 531 GGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAY 568



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 141/249 (56%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ V P+  S+ ++++ L K GK+++A  L + ++  GV P+   Y +L+ G C+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A ELF  M   GC  +  +Y+++I+  CK   +E A  L  +M+  G  PDVV YNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +VE A  LF+EM+R G   +  ++ T I GLC+   I +A ++F  +    
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D  +Y  LIDGL K+G+L  A++LFR +    +    VTYN++IH +C    +D+A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 361 DLFLDMEAK 369
           +LF  M +K
Sbjct: 241 ELFKSMRSK 249



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 151/281 (53%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M + N++P+  +Y  LI G   A   N+A+ LF +++  GV P+ V++  +++ LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            D+A  L   M + G  P+   YN ++D  C  G +  A +L   M   G   +V +Y+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++G CK+  +E AL L++EM   G  P+   +NT+ +GL +  ++++A ++F EM+   
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D+W+Y   IDGL K G + EA +LFR +           YN +I G+C +  L  A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ELF+S+          T+NI+I A C  GKMD+A  L   M
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRM 281


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/363 (36%), Positives = 198/363 (54%), Gaps = 8/363 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L  K+   G  PN  T+ TL+ GLC  G     L+  +++           + N V+Y 
Sbjct: 66  SLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVV------AQAFQTNQVSYG 119

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+++GLCK G    A +L   ++D +  PNVV Y+++I G C     NEA  L+ EM  +
Sbjct: 120 TLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAR 179

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + PNV+++N ++   C  G++  A  LL  MI   + P+ + ++ L+D  C  G+   A
Sbjct: 180 EIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEGK--NA 237

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +++F +M  MG   NV+SY+I+ING CK K ++ A++L  EML K + PD V YN+L  G
Sbjct: 238 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 297

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  ++  A  L +EM   G  AD   Y + +D LCKN  + +A  LF  ++    +  
Sbjct: 298 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  LIDGLCK GRLK A ELF+ L       DV TY +MI  LC +G  D+A  +  
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417

Query: 365 DME 367
            ME
Sbjct: 418 KME 420



 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 195/354 (55%), Gaps = 8/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           + N  +Y TL+NGLC+TG T  A+ L   + + +       +PN V Y+ IIDGLCK+  
Sbjct: 112 QTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRS------TRPNVVMYSAIIDGLCKDKL 165

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V++A +L+ +M    I PNV+TYN+LI  FC A     A  L  EM+ + + P+V +F++
Sbjct: 166 VNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSI 225

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCK GK   A ++   M+Q+GV PN + YN +++G C   RV+ A  L   M    
Sbjct: 226 LIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 283

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +  +Y+ LI+G CK+  I  AL+L +EM  +G   DVV Y +L   L +   +++A 
Sbjct: 284 MVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKAT 343

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF +M+  G+    + Y   IDGLCK G +  A ELF+ L +    +D+  Y  +I GL
Sbjct: 344 ALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGL 403

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK G    A  +   +     I + VT+ I+I +L    + DKA  L  +M AK
Sbjct: 404 CKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 457



 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 179/351 (50%), Gaps = 8/351 (2%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDK 78
           +  +N ++  L +  + +  ++L ++M     E       N VT + +I+  C  G +  
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIE------QNLVTLSILINCFCHLGQMAF 63

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           +  L  K+      PN +T+ +L+ G C   +  +      +++ Q  Q N VS+  ++N
Sbjct: 64  SFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLN 123

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LCK G+   A +LL ++     RPN  +Y+ ++DG C    VN A +L+  M++     
Sbjct: 124 GLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFP 183

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           NV +Y+ LI  +C   ++ GA SL  EM+ K I PDV  ++ L   L +  + + A ++F
Sbjct: 184 NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCK--EGKNAKQIF 241

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
             M + GV  + ++Y   I+GLCK   + EA+ L R +       D   YN LIDGLCKS
Sbjct: 242 HAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKS 301

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GR+  A  L   +      ADVVTY  ++ ALC +  +DKA  LF+ M+ +
Sbjct: 302 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKER 352



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 152/276 (55%), Gaps = 12/276 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A +L  ++ +    P+V+T++ LI+ LC+ G    A  +F  M     + GV   PN 
Sbjct: 202 MGAFSLLHEMILKNINPDVYTFSILIDALCKEGKN--AKQIFHAMV----QMGV--NPNV 253

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  +I+GLCK   VD+A  L  +M  +N+ P+ VTYNSLI G C +     A  L  E
Sbjct: 254 YSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE 313

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G   +VV++  +++ LCKN  +D+A+ L   M + G++P  + Y  L+DG C  GR
Sbjct: 314 MHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGR 373

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A+ELF  +   GC  +V++Y+++I+G CK    + AL++ S+M   G  P+ V +  
Sbjct: 374 LKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEI 433

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +   LFE  + ++A KL  EM    +A     +R F
Sbjct: 434 IIRSLFEKDENDKAEKLLHEM----IAKGLLGFRNF 465


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/368 (34%), Positives = 197/368 (53%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA    +++   G +PNV+TY  LI+G C++G   VA   F+EM       G    PN V
Sbjct: 534 EAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM------LGCGIAPNDV 587

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T +IDG CKEG   +A  +F  M   +++P+V TY++LIHG         A  L  E 
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P+V ++N I++  CK G + +A +L E M Q G+ PN   YN L++G C  G +
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA ELF  +   G  HN  +Y+ +I+GYCK+  +  A  L+ EM  KG+ PD  +Y+ L
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    E+A  LF E  + G A+ T +    +DG CK+G ++EA +L   +     
Sbjct: 768 IDGCRKEGNTEKALSLFLESVQKGFAS-TSSLNALMDGFCKSGKVIEANQLLEDMVDKHV 826

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   Y  LID  CK+G LK A + F  + +  L+ + +TY  ++      G+  +   
Sbjct: 827 KPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFA 886

Query: 362 LFLDMEAK 369
           LF +M AK
Sbjct: 887 LFDEMIAK 894



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 188/362 (51%), Gaps = 8/362 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +  ++   G +P    Y  LI+G  R G +  A  + EEM A G        K N 
Sbjct: 324 EAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARG-------VKLNL 376

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  ++ G+CK G ++KA  L  +M    I P+  TYN++I G+    + +  K L  E
Sbjct: 377 FTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSE 436

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    + P   +  +I+N LC++G +++ASR+ E+M+ +GV+PNA +Y TL+ G    GR
Sbjct: 437 MKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGR 496

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  +   M+  G + +V  Y+ +I G CK++++E A     EM+ +G+KP+V  Y  
Sbjct: 497 FQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGA 556

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +++ A + F EM   G+A +       IDG CK G   EA  +FR +    
Sbjct: 557 LIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRS 616

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+R Y+ LI GL ++G+L+ A EL        L+ DV TYN +I   C  G + KA 
Sbjct: 617 VHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAF 676

Query: 361 DL 362
            L
Sbjct: 677 QL 678



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 191/369 (51%), Gaps = 9/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ +F  +   G +PN   Y TLI G  + G    A+ + + M       GV  +P+ +
Sbjct: 464 DASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKK----GV--QPDVL 517

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y ++I GLCK   +++AK+  ++M +  + PNV TY +LIHG+C + +   A   F EM
Sbjct: 518 CYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN V    +++  CK G   EA+ +   M+   V P+   Y+ L+ G    G++
Sbjct: 578 LGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKL 637

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL       G   +VF+Y+ +I+G+CK   I  A  L+  M  KGI P+++ YN L
Sbjct: 638 QGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNAL 697

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++ERA +LFD +   G+A +   Y T IDG CK+G + +A  LF  + +   
Sbjct: 698 INGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGV 757

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             D   Y+ LIDG  K G  + A  LF  S+ +G   A   + N ++   C  GK+ +A 
Sbjct: 758 PPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG--FASTSSLNALMDGFCKSGKVIEAN 815

Query: 361 DLFLDMEAK 369
            L  DM  K
Sbjct: 816 QLLEDMVDK 824



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 168/349 (48%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V+TY  LIN   R G+      L  EM          C P+ VTY  +I GLC+ G VD
Sbjct: 235 DVYTYTHLINAHFRAGNAKEGKRLLFEMEEKG------CSPSLVTYNVVIGGLCRAGEVD 288

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A EL   M  + +  +V TY+ LI GF       EAK +  EM  +G++P  V++  ++
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALI 348

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +   + G   EA R+ E M+  GV+ N F YN L+ G C  G + +A+ L   M  +G K
Sbjct: 349 DGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIK 408

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  +Y+ +I GY K +       L SEM    + P       +  GL     +E A ++
Sbjct: 409 PDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRV 468

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F+ M   GV  +   Y T I G  + G   EAV + + +     + D+  YN +I GLCK
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           S +++ A +    +    L  +V TY  +IH  C  G+M  A   F +M
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEM 577



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 172/353 (48%), Gaps = 7/353 (1%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  PN+ TYN LINGLC+ G    A  LF+      G  G     N VTY TIIDG CK 
Sbjct: 686  GISPNIITYNALINGLCKAGEIERARELFD------GIPGKGLAHNAVTYATIIDGYCKS 739

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            G + KA  LF +M  + + P+   Y++LI G     +  +A  LF+E + +G   +  S 
Sbjct: 740  GNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGF-ASTSSL 798

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            N +M+  CK+GK+ EA++LLE M+   V+P+   Y  L+D  C TG +  AE+ FV M+ 
Sbjct: 799  NALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQK 858

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                 N  +Y+ L++GY          +L+ EM++K I+PD V ++ +     +     +
Sbjct: 859  RNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVK 918

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              KL D+M + G           ID LC+  ++ E +++   +      L +   + L+ 
Sbjct: 919  TLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVR 978

Query: 314  GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               K+G++  A  + +S+ R   + D    N +I+        + A D    M
Sbjct: 979  CFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 168/378 (44%), Gaps = 74/378 (19%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMK--------------------------------- 87
           V +  +IDG  K+G  D+A   FL  K                                 
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 88  --DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
             + N+  +V TY  LI+    A +  E K L  EM ++G  P++V++NV++  LC+ G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +DEA  L +LM + G+  + F Y+ L+DGF    R   A+ +   M S G K    +Y+ 
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+G+ +  +   A  +  EML++G+K ++  YN L  G+ +   +E+A  L +EM   G
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC--LIDGLCKSGRLKI 323
           +  DT  Y   I+G  K        +L   ++  K  L   AY C  +I+GLC+ G ++ 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK--KSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 324 AWELFRSL------PRGVLIA-----------------------------DVVTYNIMIH 348
           A  +F  +      P  V+                               DV+ YN +I 
Sbjct: 465 ASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVII 524

Query: 349 ALCADGKMDKARDLFLDM 366
            LC   KM++A+D  ++M
Sbjct: 525 GLCKSRKMEEAKDYLVEM 542



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 122/272 (44%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           V +  LI G+     ++EA   F+     G    ++  N ++++L K  K++   R    
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++  V  + + Y  L++     G     + L   ME  GC  ++ +Y+++I G C+  E
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A  L   M  KG+  DV  Y+ L  G  +  +   A  + +EM   G+     AY  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDG  + G   EA  +   +     +L++  YN L+ G+CK G ++ A  L   +    
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  D  TYN MI     +    + +DL  +M+
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMK 438



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 79/167 (47%)

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           + +LI+GY K    + A+S +      G    ++  N L   L + +++E  ++ ++ M 
Sbjct: 169 FELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGML 228

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
              V  D + Y   I+   + G   E   L   +        +  YN +I GLC++G + 
Sbjct: 229 EANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVD 288

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A+EL + + +  L+ADV TY+I+I       +  +A+ +  +M +K
Sbjct: 289 EAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSK 335



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 64/138 (46%), Gaps = 8/138 (5%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV-VCKPNT 60
            E  ALF ++     EP+  T++ +I+   + G  +  L L ++M    G     VC    
Sbjct: 883  EMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCH--- 939

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
                 +ID LC++  V +  ++  K++++ +N ++ T ++L+  F  A   + A  +   
Sbjct: 940  ----VLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKS 995

Query: 121  MMDQGVQPNVVSFNVIMN 138
            M+     P+    N ++N
Sbjct: 996  MVRFKWVPDSTELNDLIN 1013


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/372 (34%), Positives = 209/372 (56%), Gaps = 13/372 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A      L  F   P+V+ +N LI+GL + G+   A+ LFE M +         KP  
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR------VKPEI 132

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           VTY T+I GLCK G ++KA+EL  +M  K     P++VTYN+LI+ F  A+   EA C F
Sbjct: 133 VTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA-CAF 191

Query: 119 IEMMD-QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            E M   G+ P+V++ N++++ +CK+G ++EA  +L+ M   G  P+   YN+++   C+
Sbjct: 192 REKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCV 251

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+V  A E+   +++M C  ++ +++ L++G+CK   +  AL +  EM  + I PDV+ 
Sbjct: 252 AGKVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVIT 308

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  GL  + QV+ AF L +E+ R G   D  AY + +DGLCK+G I EA +L + + 
Sbjct: 309 YTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMS 368

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +      +  Y+ L+ G C++G +  A E+   +    ++  + TYNI++  L  DG + 
Sbjct: 369 VRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSIS 428

Query: 358 KARDLFLDMEAK 369
           KA  L  D+ A+
Sbjct: 429 KAVSLISDLVAR 440



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 209/369 (56%), Gaps = 11/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +++ G  P+V TYN++I+ LC  G  + A  + + M+         C P+ V
Sbjct: 222 EALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---------CSPDLV 272

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T++DG CK G + +A E+  +M  ENI P+V+TY  L++G C       A  L  E+
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P+V+++  +++ LCK+G+++EA +L++ M   G R    +Y++L+ G+C  G V
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A E+   M S+     +F+Y+I++ G  K+  I  A+SL S+++++G  PDVV YNTL
Sbjct: 393 HKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTL 452

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + ++V  A  L DEM   G   +     + + GLC+ G + +A  L   +   ++
Sbjct: 453 IDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRH 512

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIMIHALCADGKMDKAR 360
             ++  Y  LIDGLCKS R+  A  +  ++ RG  +A D   Y  +I ++   G++ +A 
Sbjct: 513 APNVVVYTSLIDGLCKSDRMDDACMVLDAM-RGQGVALDDFAYRKLIVSMSHGGRVAEAM 571

Query: 361 DLFLDMEAK 369
            ++ +M A+
Sbjct: 572 AMYDEMVAR 580



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 192/368 (52%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +     +P + TYNT+I+GLC++G+   A  L EEM    G+      P+ V
Sbjct: 115 QAVKLFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGK----SAPDIV 170

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+   +   + +A     KMK   INP+V+T N L+ G C   D  EA  +   M
Sbjct: 171 TYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGM 230

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+V+++N I++ LC  GK+ EA+ +L+ M      P+   +NTL+DGFC  G +
Sbjct: 231 KLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGML 287

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA E+   M       +V +Y+IL+NG C+  +++ A  L  E++ +G  PDV+ Y +L
Sbjct: 288 PRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSL 347

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A KL  EM   G       Y + + G C+ G + +A E+   +  +  
Sbjct: 348 VDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINM 407

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  YN ++ GL K G +  A  L   L     + DVVTYN +I  LC   ++ +A D
Sbjct: 408 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 467

Query: 362 LFLDMEAK 369
           L  +M ++
Sbjct: 468 LADEMASR 475



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 190/358 (53%), Gaps = 11/358 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +V +YN L++ L ++GH      +++++ +        C PN VT+  +I G CK 
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSG------CSPNLVTFKILIRGNCKA 75

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A E    + + ++ P+V  +N LIHG     + ++A  LF  M    V+P +V++
Sbjct: 76  GQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTY 135

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           N +++ LCK+G +++A  LLE MI+ G +  P+   YNTL++ F    R+  A      M
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKM 195

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           ++ G   +V + +IL++G CK+ ++E AL +   M   G  PDV+ YN++   L    +V
Sbjct: 196 KAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKV 255

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             A ++   M     + D   + T +DG CK G +  A+E+   +       D+  Y  L
Sbjct: 256 VEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTIL 312

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++GLC+ G++++A+ L   + R   I DV+ Y  ++  LC  G++++A  L  +M  +
Sbjct: 313 VNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVR 370



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 143/302 (47%), Gaps = 41/302 (13%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TY  L+NGLCR G   VA  L EE+       G +  P+ + YT+++DGLCK G +
Sbjct: 304 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ----GYI--PDVIAYTSLVDGLCKSGEI 357

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A +L  +M        VV Y+SL+ G+C A + ++A+ +  EM+   + P + ++N++
Sbjct: 358 EEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIV 417

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L K+G + +A  L+  ++  G  P+   YNTL+DG C   RV  A +L   M S GC
Sbjct: 418 LGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGC 477

Query: 197 ---------------------------------KH--NVFSYSILINGYCKNKEIEGALS 221
                                            +H  NV  Y+ LI+G CK+  ++ A  
Sbjct: 478 FPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACM 537

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +   M  +G+  D   Y  L + +    +V  A  ++DEM   G   D    +T  +   
Sbjct: 538 VLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAM 597

Query: 282 KN 283
            N
Sbjct: 598 SN 599



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 2/212 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G + +   YN L+D    +G   R  +++  +   GC  N+ ++ ILI G CK  +  
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL     +    + PDV I+N L  GLF+    ++A KLF+ M+   V  +   Y T I
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139

Query: 278 DGLCKNGYIVEAVELFRTL--RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            GLCK+G + +A EL   +  +  K   DI  YN LI+   ++ R++ A      +    
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAG 199

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  DV+T NI++  +C DG +++A ++   M+
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMK 231



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 87/170 (51%), Gaps = 2/170 (1%)

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           E  G KH+V SY+ L++   K+        +Y ++L  G  P++V +  L  G  +  Q 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            RA +    +    VA D + +   I GL K+G   +AV+LF  +   + + +I  YN +
Sbjct: 79  MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138

Query: 312 IDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKMDKA 359
           I GLCKSG L+ A EL   + R  G    D+VTYN +I+A     ++ +A
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREA 188



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 1/117 (0%)

Query: 254 AFKLFD-EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           A + FD   ++ G   D  +Y   +D L K+G+     ++++ L       ++  +  LI
Sbjct: 10  AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G CK+G+   A E  R+L    +  DV  +N++IH L  DG  D+A  LF +ME+ 
Sbjct: 70  RGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/362 (35%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   GC PN  ++NT+I GLC+      A  +F EM   +        P++ 
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD------IPPDSW 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +IDGL K G +++A +LF +M D  I P+ VTYN +IHG C A   +EA  LF  M
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+  +FN++++  CK GK+DEA RLL+ M   G  P+   Y+TL+ G C   RV
Sbjct: 247 RSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARV 306

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M    CK  V + + LI+G CK   I+ A  +   M+S G  PDVV YNTL
Sbjct: 307 DDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTL 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     Q ERA +L  +M   G+A +   Y   + GLCK   + EA  +F  ++    
Sbjct: 367 VHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGC 426

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y  LI G C +G++    +LF  +    +  D V Y  +   LC  G+  +A +
Sbjct: 427 APNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALE 486

Query: 362 LF 363
           + 
Sbjct: 487 IL 488



 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/367 (34%), Positives = 202/367 (55%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   GC P+  TYN +I+  C+ G    A +L ++M     E G V  P+ V
Sbjct: 63  DARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI----EDGHV--PDVV 116

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++DGLCK   V++A  LF +M+     PN  ++N++I G C  +  ++A  +F EM
Sbjct: 117 TYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEM 176

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+  S+ ++++ L K GK++EA +L + M+  G+ P+A  YN ++ G CL   +
Sbjct: 177 EAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTL 236

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF SM S GC+ + F+++ILI+ +CK  +++ A  L   M   G  PDVV Y+TL
Sbjct: 237 DEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  I +V+ A  L ++M +           T I GLCK G I EA E+   +     
Sbjct: 297 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN L+ G C++G+ + A EL   +    L  +VVTY  ++  LC   ++ +A  
Sbjct: 357 SPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACG 416

Query: 362 LFLDMEA 368
           +F  M++
Sbjct: 417 VFAQMKS 423



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/309 (37%), Positives = 177/309 (57%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P++ +Y  +IDGL K G ++ A+ LF K+    + P+ V Y SLIHG C AN +++A+ L
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M  +G  P+ V++NV+++  CK G ++EA  L++ MI+ G  P+   YNT+MDG C 
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCK 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           + RV  A  LF  ME +GC  N  S++ +I G C+  +I+ A  ++ EM +K I PD   
Sbjct: 128 SSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWS 187

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  GL +  ++  A+KLF  M   G+      Y   I G+C    + EA+ELF+++R
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMR 247

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                     +N LID  CK G+L  A+ L + +     + DVVTY+ +I  LC+  ++D
Sbjct: 248 SKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 307

Query: 358 KARDLFLDM 366
            AR L  DM
Sbjct: 308 DARHLLEDM 316



 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 193/368 (52%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF KL   G  P+   Y +LI+GLC       A  LF +M N  G     C P+ V
Sbjct: 28  DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRG-----CPPSPV 81

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID  CK G +++A +L  KM ++   P+VVTYN+++ G C ++   EA  LF EM
Sbjct: 82  TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 141

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN  S N I+  LC+  K+D+A ++   M    + P+++ Y  L+DG    G++
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKL 201

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A +LF  M   G   +  +Y+++I+G C    ++ AL L+  M SKG +P    +N L
Sbjct: 202 NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +  +++ AF+L   M   G   D   Y T I GLC    + +A  L   +   + 
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +   N LI GLCK+GR+K A E+  ++       DVVTYN ++H  C  G+ ++AR+
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381

Query: 362 LFLDMEAK 369
           L  DM A+
Sbjct: 382 LLSDMVAR 389



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G  P+V TYNT+++GLC++     AL LF EM        + C PN  
Sbjct: 98  EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER------LGCTPNRR 151

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ TII GLC++  +D+A ++F +M+ ++I P+  +Y  LI G   A   NEA  LF  M
Sbjct: 152 SHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRM 211

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ V++NV+++ +C    +DEA  L + M   G RP+ F +N L+D  C  G++
Sbjct: 212 LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKL 271

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   +V +YS LI+G C    ++ A  L  +M+ +  KP VV  NTL
Sbjct: 272 DEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTL 331

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A ++ D M   G + D   Y T + G C+ G    A EL   +     
Sbjct: 332 IHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGL 391

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y  L+ GLCK+ RL  A  +F  +       ++ TY  +I   C+ G++D    
Sbjct: 392 APNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLK 451

Query: 362 LFLDM 366
           LF +M
Sbjct: 452 LFGEM 456



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 190/361 (52%), Gaps = 8/361 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P+  TYN +I+G+C       AL LF+ M +        C+P+  
Sbjct: 203 EAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKG------CRPSRF 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID  CK G +D+A  L  +M D+   P+VVTY++LI G C     ++A+ L  +M
Sbjct: 257 TFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  +P VV+ N +++ LCK G++ EA  +L+ M+  G  P+   YNTL+ G C  G+ 
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA EL   M + G   NV +Y+ L++G CK   +  A  ++++M S G  P++  Y  L
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-ILK 300
            +G     QV+   KLF EM   G++ D   Y T    LCK+G    A+E+ R  R  L+
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496

Query: 301 YEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            E      Y   +DGL ++G++++A    R + RG  +        ++  LC  G+  +A
Sbjct: 497 SEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEA 556

Query: 360 R 360
           R
Sbjct: 557 R 557



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 162/338 (47%), Gaps = 45/338 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +R  GC P+ FT+N LI+  C+ G    A  L + M + +G       P+ V
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD-DGHV-----PDVV 291

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+I GLC    VD A+ L   M      P VVT N+LIHG C A    EA+ +   M
Sbjct: 292 TYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAM 351

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++N +++  C+ G+ + A  LL  M+  G+ PN   Y  L+ G C   R+
Sbjct: 352 VSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRL 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M+S GC  N+F+Y+ LI G+C   +++G L L+ EM+  GI PD V+Y TL
Sbjct: 412 PEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWA---YRTFIDG------------------- 279
              L +  +  RA ++  E  R  + ++ W    YR  +DG                   
Sbjct: 472 AAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVR 530

Query: 280 ----------------LCKNGYIVEAVELFRTLRILKY 301
                           LCK+G   EA  +   +  L Y
Sbjct: 531 GGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAY 568



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 141/249 (56%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ V P+  S+ ++++ L K GK+++A  L + ++  GV P+   Y +L+ G C+   
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A ELF  M   GC  +  +Y+++I+  CK   +E A  L  +M+  G  PDVV YNT
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +VE A  LF+EM+R G   +  ++ T I GLC+   I +A ++F  +    
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D  +Y  LIDGL K+G+L  A++LF+ +    +    VTYN++IH +C    +D+A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 361 DLFLDMEAK 369
           +LF  M +K
Sbjct: 241 ELFKSMRSK 249


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 196/355 (55%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N LIN   R G    A+ +FE+M N     G++  P+TVT+ T+I  LC+ 
Sbjct: 327 GIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK----GMI--PDTVTFATVISSLCRI 380

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS- 132
           G +D A   F  M D  + P+   Y  LI G C   +  +AK L  EMM++ + P  V  
Sbjct: 381 GRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 440

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F+ I+N L K G++ E   +++LM+Q G RPN   +N+LM+G+CL G +  A  L  +M 
Sbjct: 441 FSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 500

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G + N + Y  L++GYCKN  I+ AL+++ +ML KG+KP  V+YN +  GLF+  +  
Sbjct: 501 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTT 560

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A K+F EM   G       Y   + GLC+N    EA  L   L  +  + DI  +N +I
Sbjct: 561 AAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVI 620

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             + K GR + A ELF ++    L+  V TYN+MI  L  +   ++A +LF+ +E
Sbjct: 621 SAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVE 675



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 181/366 (49%), Gaps = 20/366 (5%)

Query: 3   AAALFMKLRVFGCE------PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVV 55
           A  LF ++  + C       P ++TYN LI+   R     +AL +F  +   G G     
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLG----- 154

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
             P+  +Y T+IDG  KEG VDKA ELF KM +++++P+VVTYNSLI G C   +  +++
Sbjct: 155 --PDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSE 212

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +  +M+D G++PN  ++N ++      G   E+ R+ + M   G+ P     N+ +   
Sbjct: 213 RVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHAL 272

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   R+  A+++F SM   G K N+ SYS L++GY          SL + M+SKGI P+ 
Sbjct: 273 CRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNH 332

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             +N L         +++A  +F++MQ  G+  DT  + T I  LC+ G + +A+  F  
Sbjct: 333 RFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNH 392

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL------PRGVLIADVVTYNIMIHA 349
           +  +        Y CLI G C  G L  A EL   +      P GV     +  N+    
Sbjct: 393 MVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEG 452

Query: 350 LCADGK 355
             A+GK
Sbjct: 453 RVAEGK 458



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 184/401 (45%), Gaps = 42/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+      P+V TYN+LI+GLC+T   + +  + E+M +         +PN  
Sbjct: 175 KAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG------IRPNNK 228

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I G    G   ++  +F +M    + P VV  NS IH  C  N   EAK +F  M
Sbjct: 229 TYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSM 288

Query: 122 MDQGVQPNVVS-----------------------------------FNVIMNELCKNGKM 146
           + +G +PN++S                                   FN+++N   + G M
Sbjct: 289 VLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMM 348

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A  + E M   G+ P+   + T++   C  GR++ A   F  M  +G   +   Y  L
Sbjct: 349 DKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCL 408

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIY-NTLFIGLFEIHQVERAFKLFDEMQRHG 265
           I G C + E+  A  L SEM++K I P  V Y +++   LF+  +V     + D M + G
Sbjct: 409 IQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTG 468

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +   + + ++G C  G + EA  L   +  +  E +   Y  L+DG CK+GR+  A 
Sbjct: 469 QRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDAL 528

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +FR +    +    V YNI++H L    +   A+ +F +M
Sbjct: 529 TVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEM 569



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 159/342 (46%), Gaps = 5/342 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   Y  LI G C  G  + A  L  EM N +     +  P    +++II+ L KE
Sbjct: 397 GVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKD-----IPPPGVKYFSSIINNLFKE 451

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V + K++   M      PNVVT+NSL+ G+C   +  EA  L   M   G++PN   +
Sbjct: 452 GRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIY 511

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++  CKNG++D+A  +   M+  GV+P + +YN ++ G     R   A+++F  M  
Sbjct: 512 GTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIE 571

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ +Y +++ G C+N   + A  L  ++ +  +K D++ +N +   + ++ + + 
Sbjct: 572 SGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQE 631

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LF  +  +G+      Y   I  L K     EA  LF ++       D R  N ++ 
Sbjct: 632 AKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVR 691

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
            L K   +  A      +    L  +  T +++      +GK
Sbjct: 692 MLLKKAEVAKASNYLSIIDENNLTLEASTISLLASLFSREGK 733



 Score =  110 bits (276), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 125/242 (51%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P + ++N++++   +  + + A  +   +++ G+ P+   YNTL+DGF   G V++A EL
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M       +V +Y+ LI+G CK KE+  +  +  +M+  GI+P+   YN+L  G   
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYST 239

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
               + + ++F EM   G+        +FI  LC++  I EA ++F ++ +   + +I +
Sbjct: 240 AGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y+ L+ G    G       L   +    ++ +   +NI+I+A    G MDKA  +F DM+
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 368 AK 369
            K
Sbjct: 360 NK 361



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 101/192 (52%), Gaps = 6/192 (3%)

Query: 184 AEELFVSMESMGCKH------NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           A ELF  M+   C H       +++Y+ILI+ Y +    E AL+++  +L  G+ PDV  
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNTL  G  +  +V++A++LF +M    V+ D   Y + IDGLCK   +V++  +   + 
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 + + YN LI G   +G  K +  +F+ +    LI  VV  N  IHALC   ++ 
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279

Query: 358 KARDLFLDMEAK 369
           +A+D+F  M  K
Sbjct: 280 EAKDIFDSMVLK 291


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/357 (34%), Positives = 199/357 (55%), Gaps = 7/357 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V+TYN+LI+G+C+ G    A+ + ++M          C PNTVTY T+I  LCKE
Sbjct: 293 GFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRE------CSPNTVTYNTLISALCKE 346

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             ++ A +L   +  + + P+V T+N+LI G C + + + A  +F EM ++G +P+  ++
Sbjct: 347 NEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTY 406

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++ LC   ++ EA  LL+ M   G   NA VYNTL+DG C + R+  AEE+F  ME 
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 466

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   +  +Y+ LI+G CKNK +E A  L  +M+ +G+KPD   YN+L      +  +E+
Sbjct: 467 LGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEK 526

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M  +G   D + Y T I GLC+ G +  A +L R++++    L   AYN +I 
Sbjct: 527 AGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQ 586

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
            L    R K    LFR +       D +T+ I+   LC   G + +A D  ++M  K
Sbjct: 587 ALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEK 643



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 206/368 (55%), Gaps = 8/368 (2%)

Query: 4   AALFMKLRV--FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AL MK ++  +GC     +   L+NG C+ G    AL    E++    E G    P+ V
Sbjct: 211 GALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVS----EEGF--SPDQV 264

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++++G C+ G V+ A ++   M ++  +P+V TYNSLI G C   ++ +A  +  +M
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM 324

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN V++N +++ LCK  +++ A+ L  +++  G+ P+   +NTL+ G CL+   
Sbjct: 325 ILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQ 384

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+F  M++ GCK + F+YSILI+  C  + ++ AL L  EM S G   + V+YNTL
Sbjct: 385 DIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A ++FD+M+  GV+  +  Y T IDGLCKN  + EA +L   + +   
Sbjct: 445 IDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGL 504

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   YN L+   C+ G ++ A ++ +++       D+ TY  +I  LC  G++D A  
Sbjct: 505 KPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASK 564

Query: 362 LFLDMEAK 369
           L   ++ K
Sbjct: 565 LLRSVQMK 572



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 178/389 (45%), Gaps = 41/389 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G +P+   YN  +N L       +   L  +M N     G+V   +  T+  +I  LCK
Sbjct: 117 LGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNE----GIVL--DVSTFNVLIKALCK 170

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +  A  +  +M +  + P+ +T+ +L+ GF    D N A  +  +M+  G     VS
Sbjct: 171 AHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVS 230

Query: 133 FNVIMNELCKNGKMDEASR-----------------------------------LLELMI 157
             V++N  CK G+++EA R                                   +++ MI
Sbjct: 231 VKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMI 290

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G  P+ + YN+L+ G C  G   +A E+   M    C  N  +Y+ LI+  CK  EIE
Sbjct: 291 EKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIE 350

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L   ++SKG+ PDV  +NTL  GL      + A ++F+EM+  G   D + Y   I
Sbjct: 351 AATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILI 410

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           D LC    + EA+ L + +       +   YN LIDGLCKS R++ A E+F  +    + 
Sbjct: 411 DSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVS 470

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
              VTYN +I  LC + ++++A  L   M
Sbjct: 471 RSSVTYNTLIDGLCKNKRVEEASQLMDQM 499



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 152/312 (48%), Gaps = 2/312 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN  T+ T+I       F +    L +   +    P+   YN  ++     N     + L
Sbjct: 88  PNATTFATLIQSFT--NFHEIENLLKILENELGFKPDTNFYNIALNALVEDNKLKLVEML 145

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+++G+  +V +FNV++  LCK  ++  A  +LE M   G++P+   + TLM GF  
Sbjct: 146 HSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIE 205

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G +N A ++   M   GC     S  +L+NG+CK   +E AL    E+  +G  PD V 
Sbjct: 206 EGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVT 265

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N+L  G   I  V  A  + D M   G   D + Y + I G+CK G   +A+E+ + + 
Sbjct: 266 FNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMI 325

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           + +   +   YN LI  LCK   ++ A +L R L    L+ DV T+N +I  LC     D
Sbjct: 326 LRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQD 385

Query: 358 KARDLFLDMEAK 369
            A ++F +M+ K
Sbjct: 386 IAMEMFEEMKNK 397



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 146/280 (52%), Gaps = 7/280 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F +++  GC+P+ FTY+ LI+ LC       AL L +EM +        C  N V 
Sbjct: 387 AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSG------CARNAVV 440

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDGLCK   ++ A+E+F +M+   ++ + VTYN+LI G C      EA  L  +M+
Sbjct: 441 YNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMI 500

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P+  ++N ++   C+ G +++A  +++ M   G  P+ F Y TL+ G C  GRV+
Sbjct: 501 MEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVD 560

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L  S++  G      +Y+ +I      K  +  + L+ EM+ K   PD + +  +F
Sbjct: 561 VASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVF 620

Query: 243 IGLFE-IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            GL      ++ A     EM   G+  +  ++    +GLC
Sbjct: 621 RGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLC 660



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 122/245 (49%), Gaps = 7/245 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC  N   YNTLI+GLC++     A  +F++M     E   V + ++V
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQM-----ELLGVSR-SSV 474

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDGLCK   V++A +L  +M  E + P+  TYNSL+  FC   D  +A  +   M
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++ ++  ++  LC+ G++D AS+LL  +   G+      YN ++    +  R 
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRT 594

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPDVVIYNT 240
                LF  M       +  ++ I+  G C     I+ A+    EML KGI P+   +  
Sbjct: 595 KEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGF 654

Query: 241 LFIGL 245
           L  GL
Sbjct: 655 LAEGL 659



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 7/146 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GCEP++FTY TLI GLCR G   VA  L   +       G+V  P+   Y  +I  L   
Sbjct: 538 GCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMK----GIVLTPHA--YNPVIQALFMR 591

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIEMMDQGVQPNVVS 132
               +   LF +M +++  P+ +T+  +  G C       EA    +EM+++G+ P   S
Sbjct: 592 KRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPS 651

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQ 158
           F  +   LC     D    L+ ++++
Sbjct: 652 FGFLAEGLCSLSMEDTLIELINMVME 677


>gi|357460285|ref|XP_003600424.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489472|gb|AES70675.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 393

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/360 (36%), Positives = 198/360 (55%), Gaps = 18/360 (5%)

Query: 26  INGLCRTGHTIVALNLFEE-MANG---NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           + GLC  G    AL   +  +A G   N    ++ KP+ V Y TIID LCK+  V    +
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 82  LFLKMKDENINPNVVTYNSLIH--------------GFCYANDWNEAKCLFIEMMDQGVQ 127
           L+ +M D+ I P+VVTYN+LI+              GF       EA  L  +M  + V 
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PN+ +F  +++ LCK+G++ +A  +L +MI+  V PN   YN+LMDG+ L   VN+A++L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F ++   G   NV SY ++ING CKNK ++ A +L+ EM SK + PD V YN+L  GL +
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCK 240

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             ++   +    EM   G  A+   Y + +DGLCKN  + +A+ L   ++      +I  
Sbjct: 241 SRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYT 300

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y  L+DGLCK+GRL+ A E+++ L       D   Y +MI+ LC +G +D+A  L   ME
Sbjct: 301 YTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKME 360



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 172/323 (53%), Gaps = 20/323 (6%)

Query: 17  PNVFTYNTLIN--------------GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           P+V TYNTLI               G    G    A+ L  +M +          PN  T
Sbjct: 72  PDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSK------TVTPNIRT 125

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT++DGLCK+G V KA+ +   M  + + PN+VTYNSL+ G+    + N+AK LF  + 
Sbjct: 126 FTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQLFNTIS 185

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PNV S+ V++N LCKN  +DEA+ L + M    + P+   YN+L+DG C + R+ 
Sbjct: 186 LRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMVPDTVAYNSLIDGLCKSRRIY 245

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              +    M   G   N+ +Y+ L++G CKN +++ A++L +++ ++GI+P++  Y  L 
Sbjct: 246 DVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITLLTKIKNQGIRPNIYTYTILV 305

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  ++  A +++ ++   G   D   Y   I+GLCK G++ EA+ L   +   K  
Sbjct: 306 DGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCKEGFLDEALSLLSKMEDNKCT 365

Query: 303 LDIRAYNCLIDGLCKSGRLKIAW 325
            D   Y   I  L +S R +I +
Sbjct: 366 PDGVTYEITIRALFESDRNEILY 388



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 136/275 (49%), Gaps = 29/275 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA  L  ++      PN+ T+ TL++GLC+ G    A N+   M     E  +V      
Sbjct: 106 EAVGLLNQMTSKTVTPNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLM 165

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    PN  +Y  +I+GLCK   VD+A  LF +M  +N+ 
Sbjct: 166 DGYFLVKEVNKAKQLFNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSKNMV 225

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ V YNSLI G C +    +      EM D+G   N++++N +++ LCKN ++D+A  L
Sbjct: 226 PDTVAYNSLIDGLCKSRRIYDVWDFIGEMHDRGQPANIITYNSLLDGLCKNHQVDKAITL 285

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G+RPN + Y  L+DG C  GR+  A+E++  + + G + +   Y+++ING CK
Sbjct: 286 LTKIKNQGIRPNIYTYTILVDGLCKNGRLRDAQEVYQDLLNKGYQLDARIYTVMINGLCK 345

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              ++ ALSL S+M      PD V Y      LFE
Sbjct: 346 EGFLDEALSLLSKMEDNKCTPDGVTYEITIRALFE 380



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 110/222 (49%), Gaps = 24/222 (10%)

Query: 172 MDGFCLTGRVNRA---EELFVS-------MESMGCKHNVFSYSILINGYCKNKEIEGALS 221
           M G CL G V +A    +  ++       +E +  K +V  Y+ +I+  CK+K +     
Sbjct: 1   MKGLCLNGEVRKALYFHDHVIAKGFHLNHIERLLVKPDVVMYNTIIDILCKDKLVSDGCD 60

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFE--------------IHQVERAFKLFDEMQRHGVA 267
           LYSEM+ K I PDVV YNTL   L                + Q++ A  L ++M    V 
Sbjct: 61  LYSEMIDKKIYPDVVTYNTLIYSLLNFVYIKIRKEYGFSILGQMKEAVGLLNQMTSKTVT 120

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +   + T +DGLCK+G + +A  +   +   + E +I  YN L+DG      +  A +L
Sbjct: 121 PNIRTFTTLVDGLCKDGEVKKARNVLAIMIKQRVEPNIVTYNSLMDGYFLVKEVNKAKQL 180

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F ++    +  +V +Y +MI+ LC +  +D+A +LF +M +K
Sbjct: 181 FNTISLRGMTPNVRSYKVMINGLCKNKMVDEAANLFKEMHSK 222


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/364 (35%), Positives = 201/364 (55%), Gaps = 11/364 (3%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +E A +F+ K+   G  P+V+TY  +I+ LC       A    EEMAN N        PN
Sbjct: 27  LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN------LTPN 80

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTYT +IDGLCK G VD+A  L  KM+ + + P  VTYNSLI G C A   +EA  L  
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLE 139

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+  G  P++ ++  ++   CK+ K D+A R+ E ++  G RP+   Y+ L+DG C  G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199

Query: 180 RVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           R+  A +LF  M +S  C  N  +Y+ LI+G+C+  +++ A++L   M   G  PDVV Y
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  G  ++ +++ A+ L ++M R G+  D   + + +DGLC+   + +AV +   +R 
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                 +  YN ++DG C++ +L+ A +    L       +VV++NIMI  LC   +  +
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSE 377

Query: 359 ARDL 362
           A +L
Sbjct: 378 AMEL 381



 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 199/368 (54%), Gaps = 16/368 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  L  ++   GC P++FTY TLI G C++  +  AL +FE++ A G        +P+ 
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF-------RPDV 185

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           VTY+ +IDGLCKEG + +A +LF +M K  +  PN VTYNSLI GFC     +EA  L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M + G  P+VV++  +MN  CK  ++D+A  LL  M + G+ P+   + +LMDG C   
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R++ A  +   M    C   V++Y+ +++GYC+  ++E A     E +     P+VV +N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFN 363

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GL ++++   A +L +E +R     D   Y T IDGLC+   + EA  ++R +   
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 300 KYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              L +   Y+ L+ GLC +G L  A    R       + ++ TYN++I A     + + 
Sbjct: 424 PGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDED 479

Query: 359 ARDLFLDM 366
           AR+L  DM
Sbjct: 480 ARELLDDM 487



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 178/315 (56%), Gaps = 2/315 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C  + VTYT++I GLCK   +++A     KM  +  +P+V TY ++IH  C  N  +EA+
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
               EM ++ + PNVV++ V+++ LCK G++DEA  LL  M +  V P A  YN+L+ G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   R + A +L   M   GC  ++F+Y+ LI G+CK+K+ + AL ++ +++++G +PDV
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V Y+ L  GL +  +++ A  LF  M + G    +T  Y + I G C+ G + EA+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       D+  Y  L++G CK  RL  A++L   + R  L  DVVT+  ++  LC + 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 355 KMDKARDLFLDMEAK 369
           ++  A  +  +M  K
Sbjct: 306 RLSDAVHILGEMRRK 320



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 177/353 (50%), Gaps = 8/353 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            C  +  TY +LI GLC+      AL    +M +          P+  TYT +I  LC E
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------PDVYTYTAVIHALCVE 59

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A++   +M + N+ PNVVTY  LI G C     +EA  L  +M  + V P  V++
Sbjct: 60  NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTY 118

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK  +  EA  LLE M+  G  P+ F Y TL+ GFC + + + A  +F  + +
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVE 252
            G + +V +YS LI+G CK   ++ A+ L+  M+  G   P+ V YN+L  G   + +++
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L + M   G + D   Y T ++G CK   + +A +L   +       D+  +  L+
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           DGLC+  RL  A  +   + R      V TYN ++   C   ++++AR   L+
Sbjct: 299 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE 351



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 147/295 (49%), Gaps = 37/295 (12%)

Query: 2   EAAALFMKLRVFG-CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----- 55
           EA  LF ++   G C PN  TYN+LI+G CR G    A+NL E MA       VV     
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 56  ----CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
               CK                    P+ VT+T+++DGLC+E  +  A  +  +M+ ++ 
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +P V TYN+++ G+C AN   EA+   +E MD    PNVVSFN+++  LCK  +  EA  
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGY 210
           L+E   +    P+  +Y T++DG C   +V+ A  ++  M E  GC  N  +YS L+ G 
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGL 440

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           C      G L      + KG  P++  YN L     + ++ E A +L D+M + G
Sbjct: 441 CN----AGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 91/161 (56%), Gaps = 12/161 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E A  FM L    C PNV ++N +I GLC+   +  A+ L EE           C P+ 
Sbjct: 342 LEEARKFM-LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR------CNPDV 394

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           V YTT+IDGLC+E  VD+A  ++ KM +E    PN +TY++L+ G C A   + A+    
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRAR---- 450

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
             +++G  PN+ ++N++++   K  + ++A  LL+ M+Q G
Sbjct: 451 GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 128/364 (35%), Positives = 201/364 (55%), Gaps = 11/364 (3%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +E A +F+ K+   G  P+V+TY  +I+ LC       A    EEMAN N        PN
Sbjct: 27  LEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRN------LTPN 80

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTYT +IDGLCK G VD+A  L  KM+ + + P  VTYNSLI G C A   +EA  L  
Sbjct: 81  VVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLE 139

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+  G  P++ ++  ++   CK+ K D+A R+ E ++  G RP+   Y+ L+DG C  G
Sbjct: 140 EMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEG 199

Query: 180 RVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           R+  A +LF  M +S  C  N  +Y+ LI+G+C+  +++ A++L   M   G  PDVV Y
Sbjct: 200 RLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTY 259

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  G  ++ +++ A+ L ++M R G+  D   + + +DGLC+   + +AV +   +R 
Sbjct: 260 TTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRR 319

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                 +  YN ++DG C++ +L+ A +    L       +VV++NIMI  LC   +  +
Sbjct: 320 KSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSE 377

Query: 359 ARDL 362
           A +L
Sbjct: 378 AMEL 381



 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/368 (34%), Positives = 199/368 (54%), Gaps = 16/368 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  L  ++   GC P++FTY TLI G C++  +  AL +FE++ A G        +P+ 
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF-------RPDV 185

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           VTY+ +IDGLCKEG + +A +LF +M K  +  PN VTYNSLI GFC     +EA  L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M + G  P+VV++  +MN  CK  ++D+A  LL  M + G+ P+   + +LMDG C   
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R++ A  +   M    C   V++Y+ +++GYC+  ++E A     E +     P+VV +N
Sbjct: 306 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFN 363

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GL ++++   A +L +E +R     D   Y T IDGLC+   + EA  ++R +   
Sbjct: 364 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423

Query: 300 KYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              L +   Y+ LI GLC +G L  A    R       + ++ TYN++I A     + + 
Sbjct: 424 PGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAFRKANRDED 479

Query: 359 ARDLFLDM 366
           AR+L  DM
Sbjct: 480 ARELLDDM 487



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 108/315 (34%), Positives = 178/315 (56%), Gaps = 2/315 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C  + VTYT++I GLCK   +++A     KM  +  +P+V TY ++IH  C  N  +EA+
Sbjct: 7   CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
               EM ++ + PNVV++ V+++ LCK G++DEA  LL  M +  V P A  YN+L+ G 
Sbjct: 67  KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGL 125

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   R + A +L   M   GC  ++F+Y+ LI G+CK+K+ + AL ++ +++++G +PDV
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V Y+ L  GL +  +++ A  LF  M + G    +T  Y + I G C+ G + EA+ L  
Sbjct: 186 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 245

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       D+  Y  L++G CK  RL  A++L   + R  L  DVVT+  ++  LC + 
Sbjct: 246 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCREN 305

Query: 355 KMDKARDLFLDMEAK 369
           ++  A  +  +M  K
Sbjct: 306 RLSDAVHILGEMRRK 320



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 177/353 (50%), Gaps = 8/353 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            C  +  TY +LI GLC+      AL    +M +          P+  TYT +I  LC E
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFH------PDVYTYTAVIHALCVE 59

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A++   +M + N+ PNVVTY  LI G C     +EA  L  +M  + V P  V++
Sbjct: 60  NRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTY 118

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK  +  EA  LLE M+  G  P+ F Y TL+ GFC + + + A  +F  + +
Sbjct: 119 NSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVA 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVE 252
            G + +V +YS LI+G CK   ++ A+ L+  M+  G   P+ V YN+L  G   + +++
Sbjct: 179 RGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMD 238

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L + M   G + D   Y T ++G CK   + +A +L   +       D+  +  L+
Sbjct: 239 EAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLM 298

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           DGLC+  RL  A  +   + R      V TYN ++   C   ++++AR   L+
Sbjct: 299 DGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE 351



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/295 (33%), Positives = 147/295 (49%), Gaps = 37/295 (12%)

Query: 2   EAAALFMKLRVFG-CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----- 55
           EA  LF ++   G C PN  TYN+LI+G CR G    A+NL E MA       VV     
Sbjct: 203 EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTL 262

Query: 56  ----CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
               CK                    P+ VT+T+++DGLC+E  +  A  +  +M+ ++ 
Sbjct: 263 MNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSC 322

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +P V TYN+++ G+C AN   EA+   +E MD    PNVVSFN+++  LCK  +  EA  
Sbjct: 323 SPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMIRGLCKVNRSSEAME 380

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGY 210
           L+E   +    P+  +Y T++DG C   +V+ A  ++  M E  GC  N  +YS LI G 
Sbjct: 381 LVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGL 440

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           C      G L      + KG  P++  YN L     + ++ E A +L D+M + G
Sbjct: 441 CN----AGMLDRARGYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 91/161 (56%), Gaps = 12/161 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E A  FM L    C PNV ++N +I GLC+   +  A+ L EE           C P+ 
Sbjct: 342 LEEARKFM-LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR------CNPDV 394

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           V YTT+IDGLC+E  VD+A  ++ KM +E    PN +TY++LI G C A   + A+    
Sbjct: 395 VMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRAR---- 450

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
             +++G  PN+ ++N++++   K  + ++A  LL+ M+Q G
Sbjct: 451 GYIEKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMVQRG 491


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 193/362 (53%), Gaps = 6/362 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++++ G EP+ FT++ LI G C       AL L++E+   +       KP+ VT
Sbjct: 132 ACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSS-----WKPDVVT 186

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +IDG CK G ++KA ++   M+     PNVVTY+SL+HG C A D ++A  LF  M 
Sbjct: 187 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 246

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PNVV++  +++ LC   K+D A  L++ M      P+   YN L+DG+C  GR+ 
Sbjct: 247 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIE 306

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTL 241
            A++LF  M +  C  +  +Y+ L+ G+C    +E A  L   M  + GI PDVV Y+ +
Sbjct: 307 EAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +   A +   EM    VA +   Y + IDGLCK G +  A+E+ + +   + 
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E  +  +N +I  LC+ G +  AW+L  ++    L   +VTY  ++      G+M+ A +
Sbjct: 427 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 486

Query: 362 LF 363
           LF
Sbjct: 487 LF 488



 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/371 (35%), Positives = 202/371 (54%), Gaps = 9/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A F K+R F   PN  TYN ++NGLC+   T  A  + +EM +G         P+ V
Sbjct: 25  QALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKS-----VAPDLV 78

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY+T+I+G CK+G +D+A E+  +M   + I P+VVTY S++ G C     + A  +  E
Sbjct: 79  TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M  +GV+P+  +F+ ++   C   K+DEA +L  E++     +P+   Y  L+DGFC +G
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            + +A ++   ME   C  NV +YS L++G CK  +++ AL L+  M SKG  P+VV Y 
Sbjct: 199 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 258

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL   H+V+ A  L DEM       DT +Y   +DG C+ G I EA +LF+ +   
Sbjct: 259 TLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATK 318

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI-ADVVTYNIMIHALCADGKMDK 358
               D   Y CL+ G C + RL+ A  L  ++     I  DVVTY+I++       +  +
Sbjct: 319 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVE 378

Query: 359 ARDLFLDMEAK 369
           A +   +M A+
Sbjct: 379 AAEFIQEMIAR 389



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 179/317 (56%), Gaps = 4/317 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P  VT+T IIDG CK   + +A   F KM+ E + PN  TYN +++G C A   ++A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 116 CLFIEMMD-QGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMD 173
            +  EM D + V P++V+++ ++N  CK G+MD A  +L E++ + G+ P+   Y +++D
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIK 232
           G C  G+++RA E+   M+  G + + F++S LI G+C  ++++ AL LY E+L S   K
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PDVV Y  L  G  +   +E+A K+   M+      +   Y + + GLCK G + +A++L
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           FR +       ++  Y  LI GLC + ++  A  L   +       D V+YN ++   C 
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 353 DGKMDKARDLFLDMEAK 369
            G++++A+ LF +M  K
Sbjct: 302 LGRIEEAKQLFKEMATK 318



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/342 (31%), Positives = 184/342 (53%), Gaps = 18/342 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   GC PNV TY TLI+GLC       A  L +EM          C P+TV
Sbjct: 237 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT------ATCCPPDTV 290

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++DG C+ G +++AK+LF +M  ++  P+ +TY  L+ GFC A+   EA+ L   M
Sbjct: 291 SYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 350

Query: 122 -MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               G+ P+VV++++++    +  +  EA+  ++ MI   V PNA  Y++L+DG C  GR
Sbjct: 351 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 410

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A E+  +M +   + +V +++ +I   C+  +++ A  L   M + G++P +V Y T
Sbjct: 411 VDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTT 470

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVA-------ADTWAYRTFIDGLCKNGYIVEAVELF 293
           L  G     ++E A++LF+ M++               A+   I GLCK   I +A+ + 
Sbjct: 471 LLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVV 530

Query: 294 RTLRILKYELDIRAYNCL--IDGLCKSGRLKIAWELFRSLPR 333
             LR    E +    +CL  +DGL ++GR + A +L  S+ +
Sbjct: 531 EELR--SRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISK 570



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 147/310 (47%), Gaps = 50/310 (16%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++AA L M ++    C P+  +YN L++G CR G    A  LF+EMA  +      C P+
Sbjct: 270 VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS------CLPD 323

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKD------------------------------- 88
            +TYT ++ G C    +++A+ L   MK                                
Sbjct: 324 RITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFI 383

Query: 89  -----ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN 143
                 N+ PN VTY+SLI G C A   + A  +   M+++ V+P+V +FN ++  LC+ 
Sbjct: 384 QEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRL 443

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF-- 201
           G MDEA +LL  M   G+ P    Y TL++GF  TGR+  A ELF  M     K +    
Sbjct: 444 GDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAAN 503

Query: 202 -----SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
                ++S LI G CK +EI+ A+++  E+ S+  +P       +  GL    + E A K
Sbjct: 504 LVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGK 563

Query: 257 LFDEMQRHGV 266
           L + + + G+
Sbjct: 564 LINSISKVGL 573



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 112/248 (45%), Gaps = 72/248 (29%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------------------------- 228
           M C+  V +++I+I+G+CK  +++ AL+ + +M                           
Sbjct: 1   MECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKA 60

Query: 229 ----------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFI 277
                     K + PD+V Y+T+  G  +  +++RA ++  EM  R G+A D   Y + +
Sbjct: 61  YEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVV 120

Query: 278 DGLCKNGYIVEAVELFRTLRI--------------------------LK----------Y 301
           DGLC++G +  A E+ R +++                          LK          +
Sbjct: 121 DGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSW 180

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y  LIDG CKSG L+ A ++   +     + +VVTY+ ++H LC  G +D+A D
Sbjct: 181 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 240

Query: 362 LFLDMEAK 369
           LF  M +K
Sbjct: 241 LFRRMTSK 248


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/352 (37%), Positives = 193/352 (54%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV T++ +INGLC+ G    A ++ E+M      +G    P+ +TY TIIDG CK G + 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMK----AWGF--SPSVITYNTIIDGYCKAGKMF 281

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA  L  +M  + I+PN +T+N LI GFC   +   AK +F EM  QG+QPNVV++N ++
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LC NGK+DEA  L + M  +G++PN   YN L++GFC    +  A E+   +   G  
Sbjct: 342 NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLA 401

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +++ LI+ Y K   ++ A  L S ML  G+ P+V  YN L +G      V+ A KL
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+ +G+ AD   Y   +D LCK G   +AV L   +  +        YN LIDG  +
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFR 521

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G    A  +   + +    A++VTYN++I   C  GK+++A  L  +M  K
Sbjct: 522 EGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK 573



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 183/353 (51%), Gaps = 6/353 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +   ++ +G  P+V TYNT+I+G C+ G    A  L +EM            PN +
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV------AKRIHPNEI 300

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +IDG C++  V  AK++F +M+ + + PNVVTYNSLI+G C     +EA  L  +M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV++N ++N  CK   + EA  +L+ + + G+ PN   +NTL+D +   GR+
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   NV +Y+ LI G+C+   ++ A  L  EM   G+K D+V YN L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +  +A +L DEM   G+      Y   IDG  + G    A+ +   +     
Sbjct: 481 VDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGR 540

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             +I  YN LI G C  G+L+ A  L   +    LI +  TY+I+   +   G
Sbjct: 541 RANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 593



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 154/286 (53%), Gaps = 6/286 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F +++  G +PNV TYN+LINGLC  G    AL L ++M+      G+  KPN VT
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS------GMGLKPNVVT 371

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+G CK+  + +A+E+   +    + PNV+T+N+LI  +  A   ++A  L   M+
Sbjct: 372 YNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMML 431

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D GV PNV ++N ++   C+ G + EA +L + M   G++ +   YN L+D  C  G   
Sbjct: 432 DTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETR 491

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  L   M  +G   +  +Y+ LI+GY +      AL++ + M  KG + ++V YN L 
Sbjct: 492 KAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLI 551

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G     ++E A +L +EM   G+  +   Y    D + + G+I +
Sbjct: 552 KGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 597



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 171/343 (49%), Gaps = 35/343 (10%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N++    ++    K G +D A E F +  D     + ++ N ++            + ++
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ + +  NVV+F+V++N LCK GK  +A  ++E M   G  P+   YNT++DG+C  
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++ +A+ L   M +     N  +++ILI+G+C+++ +  A  ++ EM  +G++P+VV Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL------ 292
           N+L  GL    +++ A  L D+M   G+  +   Y   I+G CK   + EA E+      
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 293 ---------FRT----------------LRILKYEL----DIRAYNCLIDGLCKSGRLKI 323
                    F T                LR +  +     ++  YNCLI G C+ G +K 
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKE 457

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A +L + +    L AD+VTYNI++ ALC  G+  KA  L  +M
Sbjct: 458 ARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEM 500



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 40/192 (20%), Positives = 82/192 (42%), Gaps = 1/192 (0%)

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS-EMLSKGIKPDVVI 237
           G ++  E+    +  +    N      L++ + KN     +   +S  +L      + +I
Sbjct: 102 GAIHNVEQFCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSII 161

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            + L     +  +++ A + FD    +G      +    +  L K G I     +++ + 
Sbjct: 162 VDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMI 221

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +  +++  ++ +I+GLCK G+ + A ++   +        V+TYN +I   C  GKM 
Sbjct: 222 RRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMF 281

Query: 358 KARDLFLDMEAK 369
           KA  L  +M AK
Sbjct: 282 KADALLKEMVAK 293


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 124/369 (33%), Positives = 197/369 (53%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC PNV TY+ LINGLC+ G    A  L +EM   + +      PN +
Sbjct: 134 EARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDV----LPNII 189

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TY + +DGLCK+    +A EL   ++D +  ++P+ VT+++LI G C     +EA     
Sbjct: 190 TYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA--CND 247

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+  G  PNVV++N ++N LCK  KM+ A  ++E M+  GV P+   Y+ L+D FC   
Sbjct: 248 DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 307

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           RV+ A EL   M S GC  NV +++ +I+G CK+     A  +  ++ ++ + PD V +N
Sbjct: 308 RVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFN 367

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G  +    E+A  LF+EM    +  D   +   IDGLCK G +  A ++   +  L
Sbjct: 368 ILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNL 427

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++  YN L+ GLCKSGR++   E    +     + + +TY  +++ALC   + D A
Sbjct: 428 GVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDA 487

Query: 360 RDLFLDMEA 368
             L   +++
Sbjct: 488 LQLVSKLKS 496



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 201/366 (54%), Gaps = 14/366 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF +L   G  P+V TYNTLI+ LC+ G    A  L   M++        C PN VTY+ 
Sbjct: 103 LFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRG------CVPNVVTYSV 156

Query: 66  IIDGLCKEGFVDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           +I+GLCK G +D+A+EL  +M  K  ++ PN++TYNS + G C  +   EA C  +  + 
Sbjct: 157 LINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEA-CELMRSLR 215

Query: 124 QG---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            G   V P+ V+F+ +++ LCK G+ DEA    + MI  G  PN   YN L++G C   +
Sbjct: 216 DGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADK 273

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + RA  +  SM   G   +V +YS+L++ +CK   ++ AL L   M S+G  P+VV +N+
Sbjct: 274 MERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNS 333

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +   AF++  ++    +  D   +   I G CK G   +A  LF  +    
Sbjct: 334 IIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 393

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D+  +  LIDGLCK+G+++ A ++   +    +  +VVTYN+++H LC  G++++  
Sbjct: 394 MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPC 453

Query: 361 DLFLDM 366
           +   +M
Sbjct: 454 EFLEEM 459



 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 131/357 (36%), Positives = 193/357 (54%), Gaps = 13/357 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           +V  YN ++  LCR G T  AL +F  EMA      GV   P  VTY TII+GLCK   +
Sbjct: 44  SVADYNIVLQSLCRAGETARALEIFRGEMARD----GVA--PTIVTYNTIINGLCKSNEL 97

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
               ELF ++     +P+VVTYN+LI   C A D  EA+ L   M  +G  PNVV+++V+
Sbjct: 98  GAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVL 157

Query: 137 MNELCKNGKMDEASRLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME-- 192
           +N LCK G++DEA  L++ M +    V PN   YN+ +DG C       A EL  S+   
Sbjct: 158 INGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDG 217

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+    +  ++S LI+G CK  + + A +   +M++ G  P+VV YN L  GL +  ++E
Sbjct: 218 SLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKME 275

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           RA  + + M   GV  D   Y   +D  CK   + EA+EL   +       ++  +N +I
Sbjct: 276 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSII 335

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DGLCKS R   A+++   +   +L+ D VT+NI+I   C  G  ++A  LF +M AK
Sbjct: 336 DGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAK 392



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 170/326 (52%), Gaps = 6/326 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV TYN L+NGLC+      A  + E M +     GV   P+ +TY+ ++D  CK   V
Sbjct: 256 PNVVTYNALVNGLCKADKMERAHAMIESMVDK----GVT--PDVITYSVLVDAFCKASRV 309

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A EL   M      PNVVT+NS+I G C ++   EA  + +++ ++ + P+ V+FN++
Sbjct: 310 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNIL 369

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   CK G  ++AS L E M+   ++P+   +  L+DG C  G+V  A ++   M ++G 
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV +Y++L++G CK+  IE       EM+S G  P+ + Y +L   L    + + A +
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ 489

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +++  G   DT  Y   +DGL K+G   +A+ +   +    ++ D   +     GL 
Sbjct: 490 LVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLH 549

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVT 342
           +SG L    EL R +    ++ D  T
Sbjct: 550 RSGNLAGTMELLRVVLAKGMLPDATT 575



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 159/294 (54%), Gaps = 6/294 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A+   +   G  P+V TY+ L++  C+      AL L   MA+        C PN VT
Sbjct: 277 AHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG------CTPNVVT 330

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + +IIDGLCK     +A ++ L++ +  + P+ VT+N LI G C A ++ +A  LF EM+
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + +QP+V++F  +++ LCK G+++ A  +L+LM  +GV PN   YN L+ G C +GR+ 
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIE 450

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              E    M S GC     +Y  L+   C+    + AL L S++ S G  PD V YN L 
Sbjct: 451 EPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILV 510

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            GL++  + E+A  + +EM   G   D++ +     GL ++G +   +EL R +
Sbjct: 511 DGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVV 564



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 148/281 (52%), Gaps = 14/281 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLC---RTGHTI-VALNLFEEMANGNGEFGVVCK 57
           EA  L   +   GC PNV T+N++I+GLC   R+G    +AL ++  M            
Sbjct: 311 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRML----------V 360

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ VT+  +I G CK G  ++A  LF +M  +N+ P+V+T+ +LI G C A     A+ +
Sbjct: 361 PDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDI 420

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M + GV PNVV++NV+++ LCK+G+++E    LE M+  G  P +  Y +L+   C 
Sbjct: 421 LDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCR 480

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R + A +L   ++S G   +  +Y+IL++G  K+ + E A+++  EM+ KG +PD   
Sbjct: 481 ASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFT 540

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           +   F GL     +    +L   +   G+  D     + +D
Sbjct: 541 FAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 131/388 (33%), Positives = 204/388 (52%), Gaps = 43/388 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ +YNT+INGLC+      A++L  EM       G  C+PN+ TY  ++DGLCKEG V
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEME------GSSCEPNSFTYCILMDGLCKEGRV 61

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A  L  +MK + +  +VV Y++LI GFC     +  K LF EM+++G+ PNVV ++ +
Sbjct: 62  EEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCL 121

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  CK G   EA+ +L  M + G++P+ + Y  ++ G C  GR  +A +LF  M   G 
Sbjct: 122 INGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE 181

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +  +Y++LING CK   I  A  ++  ML KG + +VV YNTL +GL    +++ A K
Sbjct: 182 EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMK 241

Query: 257 LFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEAVELFRTL------------------ 296
           LF  +   G  V  D   + T I GLCK G + +AVE++ T+                  
Sbjct: 242 LFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGE 301

Query: 297 ---------------RILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
                          R+ K  L      Y+ +IDG CK   L  A  LF  +    L   
Sbjct: 302 YIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPT 361

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDME 367
           +  YN ++ +LC +  +++AR LF +M+
Sbjct: 362 LFDYNTLMASLCKESSLEQARRLFQEMK 389



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 198/368 (53%), Gaps = 8/368 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
             ALF ++   G  PNV  Y+ LING C+ G    A  +   M     E G+  +P+  T
Sbjct: 99  GKALFDEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMT----ERGI--QPDVYT 152

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I GLCK+G   KA +LF  M ++   P+ VTYN LI+G C      +A  +F  M+
Sbjct: 153 YTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETML 212

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDGFCLTGR 180
           ++G +  VVS+N ++  LC NGK+DEA +L   +++ G  V P+   +NT++ G C  GR
Sbjct: 213 EKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGR 272

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A E++ +M   G   N+F+  ILI  Y K+  I+ A+ L+  +   G+ P    Y+ 
Sbjct: 273 LDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSV 332

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G  ++H +  A  LF  M+  G++   + Y T +  LCK   + +A  LF+ ++   
Sbjct: 333 MIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESN 392

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E D  ++N +IDG  K+G +  A EL   + +  L  D  TY+  I+ L   G+M++A+
Sbjct: 393 CEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAK 452

Query: 361 DLFLDMEA 368
             F  M A
Sbjct: 453 GAFDSMIA 460



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 197/367 (53%), Gaps = 8/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A+   +   G +P+V+TY  +I GLC+ G    AL+LF+ M     E      P+TV
Sbjct: 133 EATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEE------PSTV 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLCKEG +  A ++F  M ++     VV+YN+LI G C     +EA  LF  +
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 122 MDQG--VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++ G  V+P+V++FN ++  LCK G++D+A  + + MI+ G   N F  + L+  +  +G
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +++A EL+  +  +G   +  +YS++I+G+CK   +  A  L+S M   G+ P +  YN
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL   L +   +E+A +LF EM+      DT ++   IDG  K G I  A EL   ++ +
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQM 426

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   Y+  I+ L K G+++ A   F S+    +  D   Y+ +I     + ++++ 
Sbjct: 427 GLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEV 486

Query: 360 RDLFLDM 366
            +L   M
Sbjct: 487 INLLRQM 493



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 162/283 (57%), Gaps = 2/283 (0%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           MK  NI P++V+YN++I+G C      +A  L +EM     +PN  ++ ++M+ LCK G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           ++EA RLL  M + G+  +  VY+TL+ GFC  G ++R + LF  M   G   NV  YS 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING+CK      A ++   M  +GI+PDV  Y  +  GL +  +  +A  LFD M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
               T  Y   I+GLCK G I +A ++F T+      L++ +YN LI GLC +G+L  A 
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 326 ELFRSLPR--GVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +LF SL      +  DV+T+N +I  LC +G++DKA +++  M
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 183/352 (51%), Gaps = 8/352 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   G EP+  TYN LINGLC+ G    A  +FE M        VV      
Sbjct: 168 KALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVV------ 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +Y T+I GLC  G +D+A +LF  + ++   + P+V+T+N++I G C     ++A  ++ 
Sbjct: 222 SYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYD 281

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+++G   N+ + ++++ E  K+G +D+A  L + + ++G+ P++  Y+ ++DGFC   
Sbjct: 282 TMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMH 341

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +N A+ LF  M+  G    +F Y+ L+   CK   +E A  L+ EM     +PD + +N
Sbjct: 342 MLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFN 401

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  G  +   +  A +L ++MQ+ G+  D + Y +FI+ L K G + EA   F ++   
Sbjct: 402 IMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIAS 461

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
               D   Y+ LI G   +  ++    L R +    +I D+   N ++  LC
Sbjct: 462 GITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 159/327 (48%), Gaps = 4/327 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   G    V +YNTLI GLC  G    A+ LF  +     E G   +P+ +
Sbjct: 203 DAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL----EDGNYVEPDVI 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I GLCKEG +DKA E++  M +     N+ T + LI  +  +   ++A  L+  +
Sbjct: 259 TFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRV 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+  +++V+++  CK   ++ A  L   M   G+ P  F YNTLM   C    +
Sbjct: 319 HKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSL 378

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  M+   C+ +  S++I+I+G  K  +I  A  L ++M   G+ PD   Y++ 
Sbjct: 379 EQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSF 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L ++ Q+E A   FD M   G+  D   Y + I G   N  I E + L R +  +  
Sbjct: 439 INRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGV 498

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELF 328
            LD+   N ++  LC S       EL 
Sbjct: 499 ILDLEITNSILTFLCNSAEHLHVMELL 525



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 117/214 (54%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M +I + P+   YNT+++G C   R+ +A +L V ME   C+ N F+Y IL++G CK   
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +E A+ L  EM  KG++ DVV+Y+TL  G      ++R   LFDEM   G++ +   Y  
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+G CK G   EA  +  T+     + D+  Y C+I GLCK GR + A +LF  +    
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                VTYN++I+ LC +G +  A  +F  M  K
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEK 214


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 138/399 (34%), Positives = 206/399 (51%), Gaps = 44/399 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF       C PN FTY  LI G    G   +A+ L EEM +   E       N V
Sbjct: 40  EALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFE------GNAV 93

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +TT++ GLC  G V +A E F  M  ++  P+V+TY +L+H  C A  ++EA+ +  EM
Sbjct: 94  VHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREM 152

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV-------------------- 161
           + QG  P+ V+F+ +++ LCK G  ++A R+LE +IQ G+                    
Sbjct: 153 VAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNS 212

Query: 162 ----------------RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                            P   ++N +++GFC    ++ A +L   M   GC  NVF+++I
Sbjct: 213 VELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTI 272

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI G CK   +  A  L  +M+  G  P+VV Y+T+  GL +  QV+ A++LF  M+R  
Sbjct: 273 LITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN 332

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +   +   IDGLCK   I EA +L+  +R      DI  YN LIDGLCKS ++  A+
Sbjct: 333 CPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAF 392

Query: 326 ELFRSLPR-GVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +LF+++P  GV  A+ VTY+ + H   A G+M  A  +F
Sbjct: 393 QLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIF 431



 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 187/357 (52%), Gaps = 10/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNVFT+  LI GLC+      A  L E+M  G       C PN VTY+T+I+GLCK+
Sbjct: 262 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGG------CSPNVVTYSTVINGLCKQ 315

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A ELF  M+  N  PNVVT+N LI G C A    EA+ L+  M + G  P+++++
Sbjct: 316 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 375

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRP-NAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           N +++ LCK+ ++DEA +L + + + GV   NA  Y+TL  G+   GR+  A  +F  + 
Sbjct: 376 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 435

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y+ LI  YCK       + L  EM SKG  P V   + +  GLFE +  E
Sbjct: 436 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 495

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL---RILKYELDIRAYN 309
           RA +LFD M   G   D   Y   ++G+ +     +A+ +   +   R  K+     A +
Sbjct: 496 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVD 555

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            L++ LC+ G+   A +L   +      A V +YN ++  L    + D+A  +F  M
Sbjct: 556 ALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAM 612



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 189/393 (48%), Gaps = 45/393 (11%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           C P+V TY  L++ LC+ G    A  +  EM A G       C P+TVT++T+IDGLCK 
Sbjct: 122 CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQG-------CAPDTVTFSTLIDGLCKF 174

Query: 74  GF------------------------------------VDKAKELFLKMKDENINPNVVT 97
           G                                     V+ A ++   +  +   P V+ 
Sbjct: 175 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 234

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N +I+GFC A D + A  L   M+++G  PNV +F +++  LCK  ++ EA +LLE M+
Sbjct: 235 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  PN   Y+T+++G C  G+V+ A ELF  ME   C  NV +++ILI+G CK K IE
Sbjct: 295 MGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 354

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTF 276
            A  LY  M   G  PD++ YN+L  GL +  QV+ AF+LF  +   GV AA+   Y T 
Sbjct: 355 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 414

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
             G    G + +A  +F  L    +  D+  Y  LI   CK+ R     EL   +     
Sbjct: 415 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 474

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              V T + ++  L      ++A  LF  M A+
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 507



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 192/404 (47%), Gaps = 45/404 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+ + GC PNV TY+T+INGLC+ G    A  LF+ M   N      C PN V
Sbjct: 285 EAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRN------CPPNVV 338

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +IDGLCK   +++A++L+ +M++    P+++TYNSLI G C +   +EA  LF  +
Sbjct: 339 THNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTI 398

Query: 122 MDQGVQP-NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + GV   N V+++ + +     G+M +A R+  +++  G  P+   Y +L+  +C T R
Sbjct: 399 PESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSR 458

Query: 181 -----------------------------------VNRAEELFVSMESMGCKHNVFSYSI 205
                                                RA +LF SM + GC  +   Y++
Sbjct: 459 AVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNL 518

Query: 206 LINGYCKNKEIEGALSLYSEMLSK---GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++ G  +  + + AL++  +++ K      P     + L   L ++ + + A +L  +M 
Sbjct: 519 VVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMS 578

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G AA   +Y   + GL +     EA ++F  +       +I   N +I  LC + ++ 
Sbjct: 579 ERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVD 638

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A+EL + + +     D+ T N +I   C  G+ D AR L  +M
Sbjct: 639 DAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEM 682



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 163/375 (43%), Gaps = 70/375 (18%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  +    +D LC+     +A  LF         PN  TY  LI GF  A D + A  L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 119 IEMMDQGVQ----------------------------------PNVVSFNVIMNELCKNG 144
            EM   G +                                  P+V+++  +++ LCK G
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAG 140

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG------------------------- 179
           K DEA  +L  M+  G  P+   ++TL+DG C  G                         
Sbjct: 141 KFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFE 200

Query: 180 -----------RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
                       V  A ++   + + G    V  ++++ING+CK K+++ A  L   M+ 
Sbjct: 201 TIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIE 260

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           KG  P+V  +  L  GL + ++V  A +L ++M   G + +   Y T I+GLCK G + +
Sbjct: 261 KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDD 320

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A ELF+ +       ++  +N LIDGLCK+ R++ A +L+  +       D++TYN +I 
Sbjct: 321 AYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLID 380

Query: 349 ALCADGKMDKARDLF 363
            LC   ++D+A  LF
Sbjct: 381 GLCKSFQVDEAFQLF 395



 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 151/325 (46%), Gaps = 39/325 (12%)

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           LF       +  NV + N  +   C  N   EA  LF   M +   PN  ++ +++    
Sbjct: 9   LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
             G +D A +LLE M   G   NA V+ TLM G C  GRV  A E F +M +  C  +V 
Sbjct: 69  SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++  CK  + + A  +  EM+++G  PD V ++TL  GL +    E+AF++ +++
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187

Query: 262 QRHGVAADTWAYRTFIDGLCK-------------------------------NGYIVEAV 290
            + G+     A+ T I  LC                                NG+  +A 
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGF-CKAK 246

Query: 291 ELFRTLRILKYELD------IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
           +L    ++L+  ++      +  +  LI GLCK+ R+  A +L   +  G    +VVTY+
Sbjct: 247 DLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYS 306

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +I+ LC  G++D A +LF  ME +
Sbjct: 307 TVINGLCKQGQVDDAYELFQLMERR 331



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 9/231 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P V T + ++ GL    HT  A+ LF+ MA         C  + + Y  +++G+ + 
Sbjct: 473 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG------CTDDALIYNLVVEGMARA 526

Query: 74  GFVDKAK---ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
              DKA    E  +  +D   NP+    ++L+   C     ++AK L  +M ++G    V
Sbjct: 527 SKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAV 586

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            S+N +++ L +  + DEA+++ E M+  G  P     N ++   C   +V+ A EL   
Sbjct: 587 SSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQR 646

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           M  +GC  ++ + + LI GYCK+   + A  L  EM   G++P+   ++ L
Sbjct: 647 MSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 5/205 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG-NGEFGVVCKPNTV 61
           A  LF  +   GC  +   YN ++ G+ R      AL + E++ +  + +F     P++ 
Sbjct: 497 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKF----NPSSS 552

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
               +++ LC+ G  D AK+L  KM +      V +YN L+ G      W+EA  +F  M
Sbjct: 553 AVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAM 612

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P + + NV+++ LC   K+D+A  L++ M ++G  P+    NTL+ G+C +GR 
Sbjct: 613 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 672

Query: 182 NRAEELFVSMESMGCKHNVFSYSIL 206
           + A +L   M   G + N  ++ +L
Sbjct: 673 DLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/333 (23%), Positives = 137/333 (41%), Gaps = 68/333 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           EA  L+ ++R  GC P++ TYN+LI+GLC++     A  LF+ +                
Sbjct: 355 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 414

Query: 50  -------GEFGVVCK-----------PNTVTYTTIIDGLCK----------------EGF 75
                  G     C+           P+  TYT++I   CK                +GF
Sbjct: 415 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 474

Query: 76  -------------------VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
                               ++A +LF  M       + + YN ++ G   A+  ++A  
Sbjct: 475 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALA 534

Query: 117 LF---IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           +    I+  D+   P+  + + ++  LC+ GK D+A +LL  M + G       YN L+ 
Sbjct: 535 VLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLS 594

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G     R + A ++F +M S G    + + +++I+  C   +++ A  L   M   G  P
Sbjct: 595 GLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCP 654

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           D+   NTL  G  +  + + A KL +EM   G+
Sbjct: 655 DIETCNTLIGGYCKSGRADLARKLLEEMTEAGL 687


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/394 (32%), Positives = 199/394 (50%), Gaps = 42/394 (10%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           LR  GC+PNV TY  LI    R      A+ L EEM     E G  C PN VTY  ++D 
Sbjct: 48  LRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMR----ERG--CPPNLVTYNVLVDA 101

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK   V  A+++  KM +    PNV+T+NSL+ GFC   + ++A+ L   M+ +G++PN
Sbjct: 102 LCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPN 161

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+++ +++ LCK+ K  EA  +LE M   GV P+AF Y+ L+ G C   ++  AE++  
Sbjct: 162 VVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLR 221

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   GC  +V  YS +I+ +CK+ ++  A     EM  +   PDVV YNT+  GL ++ 
Sbjct: 222 RMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLG 281

Query: 250 QVERAFKLFDEMQ------------------------------------RHGVAADTWAY 273
           ++  A  + D+MQ                                    + G   D   Y
Sbjct: 282 KIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTY 341

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            T IDGLCK G + EA  L + ++      ++  Y  LI GLCK+ ++  A  +   +  
Sbjct: 342 TTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRN 401

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                ++VTYN M++ LC  G++ +A+ L   M+
Sbjct: 402 AGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMK 435



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 199/397 (50%), Gaps = 32/397 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  L  ++R  GC PN+ TYN L++ LC+      A ++ ++M  G     V+      
Sbjct: 75  EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 134

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                    PN VTY+ +IDGLCK     +AKE+  +MK   + 
Sbjct: 135 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVT 194

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  TY++LIHG C A+   EA+ +   M   G  P+VV ++ I++  CK+GK+ EA + 
Sbjct: 195 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 254

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYC 211
           L+ M +    P+   YNT++DG C  G++  A+ +   M+  G    +V +YS +ING C
Sbjct: 255 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLC 314

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+  +  A  L   M   G  PDVV Y T+  GL +  ++E A  L   M+R G A +  
Sbjct: 315 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 374

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y T I GLCK   + EA  +   +R      ++  YN +++GLC SGR+K A +L + +
Sbjct: 375 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434

Query: 332 P--RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              R     D  TY  +++AL +   + +A  L   M
Sbjct: 435 KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 193/366 (52%), Gaps = 10/366 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  +++  G  P+ FT+  +I  +   G    A++    M          C PN VT
Sbjct: 9   ALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMG---------CDPNVVT 59

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I    +   +++A +L  +M++    PN+VTYN L+   C  +    A+ +  +M+
Sbjct: 60  YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G  PNV++FN +++  CK G +D+A +LL +M+  G+RPN   Y+ L+DG C + +  
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+E+   M++ G   + F+YS LI+G CK  +IE A  +   M   G  PDVV+Y+++ 
Sbjct: 180 EAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSII 239

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +  ++  A K   EM++   + D   Y T IDGLCK G I EA  +   ++     
Sbjct: 240 HAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDV 299

Query: 303 L-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           L D+  Y+ +I+GLCKS  L  A +L   + +     DVVTY  +I  LC  G++++A  
Sbjct: 300 LPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEY 359

Query: 362 LFLDME 367
           L   M+
Sbjct: 360 LLQGMK 365



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 169/299 (56%), Gaps = 9/299 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  +++  G  P+ FTY+ LI+GLC+      A  +   MA G+G     C P+ 
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA-GSG-----CTPDV 232

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y++II   CK G + +A++   +M+ +  +P+VVTYN++I G C      EA+ +  +
Sbjct: 233 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQ 292

Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M + G V P+VV+++ ++N LCK+  + EA +LL+ M + G  P+   Y T++DG C  G
Sbjct: 293 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 352

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+  AE L   M+  GC  NV +Y+ LI+G CK ++++ A  +  EM + G  P++V YN
Sbjct: 353 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 412

Query: 240 TLFIGLFEIHQVERAFKLFDEMQ--RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           T+  GL    +++ A +L   M+  R   + D   YRT ++ L  +  + EA +L   +
Sbjct: 413 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 112/226 (49%), Gaps = 3/226 (1%)

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C  G +  A  LLE M   G  P+AF +  ++      G ++ A +    + SMGC  NV
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNV 57

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ LI  + + K++E A+ L  EM  +G  P++V YN L   L ++  V  A  +  +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G A +   + + +DG CK G + +A +L   +       ++  Y+ LIDGLCKS +
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              A E+   +    +  D  TY+ +IH LC   K+++A  +   M
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 95/193 (49%), Gaps = 3/193 (1%)

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G ++ A EL   M+S G   + F+++ +I       +++GA+     + S G  P+V
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNV 57

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V Y  L        ++E A KL +EM+  G   +   Y   +D LCK   +  A ++ + 
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +    +  ++  +N L+DG CK G +  A +L   +    +  +VVTY+ +I  LC   K
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 356 MDKARDLFLDMEA 368
             +A+++  +M+A
Sbjct: 178 FLEAKEVLEEMKA 190


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 188/349 (53%), Gaps = 6/349 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  LI   C+      A+ L +EM N         KP+ VTY  +I+G+CKEG
Sbjct: 190 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS------KPDVVTYNVLINGICKEG 243

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A +    M      PNV+T+N ++   C    W +A+ L  +M+ +G  P+VV+FN
Sbjct: 244 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 303

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++N LC+ G +  A  +LE M   G  PN+  YN L+ GFC   +++RA E    M S 
Sbjct: 304 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 363

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ L+   CK+ +++ A+ + +++ SKG  P ++ YNT+  GL ++ + ERA
Sbjct: 364 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 423

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            KL DEM+R G+  D   Y + + GL + G + EA++ F  L  L    +   YN ++ G
Sbjct: 424 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 483

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCKS +   A +    +          TY I+I  +  +G   +A DL 
Sbjct: 484 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 532



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 190/353 (53%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNT++  LC +G    A+ + +       +    C P+ +TYT +I+  CKE  V
Sbjct: 157 PDVVTYNTILRTLCDSGKLKQAMEVLDR------QLQKECYPDVITYTILIEATCKESGV 210

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A +L  +M+++   P+VVTYN LI+G C     +EA      M   G QPNV++ N+I
Sbjct: 211 GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 270

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++   M   GC
Sbjct: 271 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 330

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N  SY+ L++G+CK K+++ A+     M+S+G  PD+V YNTL   L +  +V+ A +
Sbjct: 331 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 390

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + +++   G +     Y T IDGL K G    A++L   +R    + DI  Y+ L+ GL 
Sbjct: 391 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 450

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + G++  A + F  L    +  + +TYN ++  LC   + D+A D    M +K
Sbjct: 451 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 503



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 44/387 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++    +LI G CR G T  A  + E +     + G V  P+ +TY  +I G CK G +
Sbjct: 90  PDIIPCTSLIRGFCRIGKTKKATWVMEILE----QSGAV--PDVITYNVLISGYCKSGEI 143

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN------------------------ 112
           D A ++  +M   N+ P+VVTYN+++   C +                            
Sbjct: 144 DNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTIL 200

Query: 113 -EAKC----------LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
            EA C          L  EM ++G +P+VV++NV++N +CK G++DEA + L  M   G 
Sbjct: 201 IEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 260

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
           +PN   +N ++   C TGR   AE+L   M   GC  +V +++ILIN  C+   +  A+ 
Sbjct: 261 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 320

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +  +M   G  P+ + YN L  G  +  +++RA +  D M   G   D   Y T +  LC
Sbjct: 321 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 380

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K+G +  AVE+   L        +  YN +IDGL K G+ + A +L   + R  L  D++
Sbjct: 381 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 440

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEA 368
           TY+ ++  L  +GK+D+A   F D+E 
Sbjct: 441 TYSSLVSGLSREGKVDEAIKFFHDLEG 467



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 146/277 (52%), Gaps = 6/277 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   GC P+V T+N LIN LCR G    A+++ E+M          C PN+
Sbjct: 281 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG------CTPNS 334

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G CKE  +D+A E    M      P++VTYN+L+   C     + A  +  +
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK + A +LL+ M + G++P+   Y++L+ G    G+
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A + F  +E +G + N  +Y+ ++ G CK+++ + A+   + M+SK  KP    Y  
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L  G+      + A  L +E+   G+   + A +  +
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 551



 Score =  134 bits (337), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 126/233 (54%), Gaps = 3/233 (1%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L +NG++++  + LE M+  G  P+     +L+ GFC  G+  +A  +   +E  G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y++LI+GYCK+ EI+ AL +   M    + PDVV YNT+   L +  ++++A +
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + D   +     D   Y   I+  CK   + +A++L   +R    + D+  YN LI+G+C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K GRL  A +   ++P      +V+T+NI++ ++C+ G+   A  L  DM  K
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 293


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 193/366 (52%), Gaps = 10/366 (2%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
            A+F ++   G  P+ +TY+ +I  LC+      A  + ++ A   G      KP    Y
Sbjct: 145 PAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDK-AKVRG-----FKPEVSVY 198

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           T +    CK G +  A E+F  +     +P+ + YN++IHG C  ND + A     EM +
Sbjct: 199 TILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNE 254

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           + V P+V ++N++++ LCK  K D+AS +L  M+  GV P+   +N++MDG C  G+  R
Sbjct: 255 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L   M    C+ +  +Y+ LI+G CK + ++ A  L  E +S G  PDVV Y+ L  
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GL +  +++ AF+L  EM   G   +   Y T IDGLCK     +A EL  +L    +  
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D+  Y  ++DGLCK GRL  A ++   + +      V+TY  ++  LC  G++D+A  +F
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494

Query: 364 LDMEAK 369
            +M +K
Sbjct: 495 KEMVSK 500



 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 198/361 (54%), Gaps = 14/361 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC PN+ TYNTLI+GLC+   T  A  L E + +     G V  P+ V
Sbjct: 384 EAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSS----GFV--PDVV 437

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT I+DGLCKEG +DKA ++   M      P+V+TY +L+ G C     +EA  +F EM
Sbjct: 438 TYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEM 497

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR--PNAFVYNTLMDGFCLTG 179
           + +    + +++  ++N  CK+ +  EA ++++     G+R  P   VYN LMDG+C  G
Sbjct: 498 VSKDCTADALAYVSLVNGYCKSSRTKEAQKVVD-----GIRGTPYIDVYNALMDGYCKEG 552

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R++    +F  M   GC  N+ +Y+I+++G CK+ +++ A      M S G  PDVV YN
Sbjct: 553 RLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYN 612

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GLF+  + + A ++ D+M + G+  D   Y T +   CK     +AV + + +   
Sbjct: 613 IIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKA 672

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR-GVLIADVVTYNIMIHALCADGKMDK 358
             + D   YN LI GL ++ RL  A+EL   + R G +++   TYN +I  LC +G + +
Sbjct: 673 GVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQ 732

Query: 359 A 359
           A
Sbjct: 733 A 733



 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 188/359 (52%), Gaps = 10/359 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  K +V G +P V  Y  L    C+TG    AL +F  + +          P+ +
Sbjct: 178 KAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----------PDAI 227

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  II G C++   D A E   +M +  + P+V TYN LI G C A+  ++A  +  EM
Sbjct: 228 AYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEM 287

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV P+ V+FN IM+ LCK GK + A  LL +M +   RP+   YNTL+ G C    V
Sbjct: 288 VDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNV 347

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA++L     S G   +V +YSIL +G CK   I+ A  L  EM  KG  P++V YNTL
Sbjct: 348 DRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTL 407

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  + E+A++L + +   G   D   Y   +DGLCK G + +A+++   +     
Sbjct: 408 IDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGC 467

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +  Y  L++GLC++GR+  A  +F+ +      AD + Y  +++  C   +  +A+
Sbjct: 468 TPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQ 526



 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 184/353 (52%), Gaps = 9/353 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   YN +I+G CR      AL   +EM     E  V   P+  TY  +IDGLCK    
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEM----NERKVA--PDVFTYNILIDGLCKASKT 277

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKA E+  +M D  + P+ VT+NS++ G C A  +  A  L   M ++  +P+  ++N +
Sbjct: 278 DKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTL 337

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK   +D A  L++  +  G  P+   Y+ L DG C  GR++ A EL   M   GC
Sbjct: 338 ISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGC 397

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N+ +Y+ LI+G CK  + E A  L   ++S G  PDVV Y  +  GL +  ++++A K
Sbjct: 398 TPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALK 457

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + + M + G       Y   ++GLC+ G + EA  +F+ +       D  AY  L++G C
Sbjct: 458 MVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYC 517

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           KS R K A ++   + RG    DV  YN ++   C +G++D+  ++F DM  +
Sbjct: 518 KSSRTKEAQKVVDGI-RGTPYIDV--YNALMDGYCKEGRLDEIPNVFEDMACR 567



 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 187/356 (52%), Gaps = 13/356 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V TY  L+ GLCRTG    A ++F+EM + +      C  + + Y ++++G CK 
Sbjct: 466 GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKD------CTADALAYVSLVNGYCKS 519

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               +A+++   ++     P +  YN+L+ G+C     +E   +F +M  +G  PN+ ++
Sbjct: 520 SRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTY 576

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++M+ LCK+GK+DEA   LE M   G  P+   YN ++DG     +   A ++   M  
Sbjct: 577 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 636

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ L+  +CK +  + A+ +   M+  G+ PD V YNTL  GL + +++  
Sbjct: 637 AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGD 696

Query: 254 AFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           A++L  EM R+G V +    Y T ID LCK G + +A+ L   +     E +   YN  I
Sbjct: 697 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 756

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           D LCK GRL  A  L   +     + D V+Y  +I  LC   ++D+A  L  +M A
Sbjct: 757 DRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVA 809



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 182/389 (46%), Gaps = 46/389 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  YN L++G C+ G      N+FE+MA         C PN  TY  ++DGLCK G V
Sbjct: 536 PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG------CVPNIKTYNIVMDGLCKHGKV 589

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A      M      P+VV+YN +I G   A+   EA+ +  +M+  G+ P+ V++N +
Sbjct: 590 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           M + CK  + D+A  +L+ MI+ GV P+   YNTL+ G   T R+  A EL   M   GC
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709

Query: 197 ------------------------------------KHNVFSYSILINGYCKNKEIEGAL 220
                                               + N  +Y+I I+  CK   ++ A 
Sbjct: 710 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 769

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDG 279
           SL SEM       D V Y T+ IGL +  Q++RA KL  EM    G+   +  +   ID 
Sbjct: 770 SLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDA 826

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
             K   + EA+ L   +        +  YN +I  LCK  ++  AWELF  +    ++A 
Sbjct: 827 FTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVAS 886

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEA 368
            V+Y ++I+ LC  G+  +A  +  +M +
Sbjct: 887 SVSYTVLIYGLCGQGRGKEALQVLEEMAS 915



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 155/334 (46%), Gaps = 31/334 (9%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           K +T T    +  L + G  D+   +F +M D    P+  TY+ +I   C  N  ++A  
Sbjct: 122 KHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFT 181

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKM------------------------------ 146
           +  +   +G +P V  + ++    CK G++                              
Sbjct: 182 MLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKND 241

Query: 147 -DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            D A   L+ M +  V P+ F YN L+DG C   + ++A E+   M   G   +  +++ 
Sbjct: 242 CDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNS 301

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++G CK  + E A SL + M  +  +P    YNTL  GL +   V+RA  L DE    G
Sbjct: 302 IMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSG 361

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   Y    DGLCK G I EA EL + +       ++  YN LIDGLCK+ + + A+
Sbjct: 362 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAY 421

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           EL  SL     + DVVTY I++  LC +G++DKA
Sbjct: 422 ELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKA 455



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 165/372 (44%), Gaps = 75/372 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   +F  +   GC PN+ TYN +++GLC+ G    A    E M +        C P+ V
Sbjct: 556 EIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAG------CVPDVV 609

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  IIDGL K     +A+++  +M    I P+ VTYN+L+  FC    +++A  +   M
Sbjct: 610 SYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNM 669

Query: 122 MDQGVQPNVVSFNV------------------------------------IMNELCKNGK 145
           +  GV P+ V++N                                     I++ LCK G 
Sbjct: 670 IKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGC 729

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG---------- 195
           + +A  L++ M   GV  N   YN  +D  C  GR++ A  L   M+++           
Sbjct: 730 LKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVII 789

Query: 196 --CKHNVF---------------------SYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             CK                         ++++LI+ + K K ++ AL+L   M+ +G  
Sbjct: 790 GLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCS 849

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P V+ YN +   L ++ +V++A++LFDEM   G+ A + +Y   I GLC  G   EA+++
Sbjct: 850 PSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQV 909

Query: 293 FRTLRILKYELD 304
              +     E+D
Sbjct: 910 LEEMASSDCEID 921



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 125/292 (42%), Gaps = 31/292 (10%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
            D   A   F+   D+G + +  + N  +  L +NG  D    + E M+  G  P+++ Y
Sbjct: 104 KDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTY 163

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN-------------------- 208
           + ++   C   ++++A  +    +  G K  V  Y+IL                      
Sbjct: 164 HLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS 223

Query: 209 -----------GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
                      G+C+  + +GAL    EM  + + PDV  YN L  GL +  + ++A ++
Sbjct: 224 PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEM 283

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM   GV  DT  + + +DGLCK G    A  L   +           YN LI GLCK
Sbjct: 284 LHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCK 343

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +  A +L         + DVVTY+I+   LC  G++D+A +L  +M  K
Sbjct: 344 QQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK 395


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/404 (33%), Positives = 210/404 (51%), Gaps = 42/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL+ ++   G  P+V TYNTL++G C+ G    AL +F+    G  + G V  P+ V
Sbjct: 28  DAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFD----GAVKRGFV--PDVV 81

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE- 120
           TY  +I+G CK   +D+A+ +  +M  EN+ P+VVTYNSL++G C     +EA+ L ++ 
Sbjct: 82  TYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDK 141

Query: 121 --------------------------------MMDQGVQPNVVSFNVIMNELCKNGKMDE 148
                                           ++ QG +P V ++N++++ L K  +++E
Sbjct: 142 GFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNE 201

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A  L   +++ G+ P+A  Y   +DG C  GRV  A  +   M+  GC  +V S++ +IN
Sbjct: 202 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVIN 261

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G CK K ++ A  L S M +KG  P+ + +NTL  G     + ++A   F EM + GV  
Sbjct: 262 GLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKP 321

Query: 269 DTWAYRTFIDGLCK---NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
               Y   +DGLCK    G I EA+ LF  +       D+  Y+ LIDGL K+G+L  A 
Sbjct: 322 TVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDAR 381

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  ++     I +V TYN +I  LC   K+D+A +LF+ M  K
Sbjct: 382 RLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEK 425



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 194/358 (54%), Gaps = 13/358 (3%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G  PN  TYN L++GLC  G    A  L+E M            P+ VTY T++ G
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAG------YSPDVVTYNTLLHG 54

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            CK G +D+A ++F         P+VVTYN+LI+GFC A+  +EA+ +   M+ + + P+
Sbjct: 55  FCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPD 114

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR-VNRAEELF 188
           VV++N ++N LCKNG++DEA  L+   +  G  PN   Y+TL+ G C   R V+ A +LF
Sbjct: 115 VVTYNSLVNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEALKLF 171

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            S+   G +  V +Y+ILI+G  K   +  A  L+S ++  G++PD + Y     GL + 
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +VE A  +  +M   G   D  ++   I+GLCK   + EA  L   +       +  ++
Sbjct: 232 GRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISF 291

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC---ADGKMDKARDLF 363
           N LI G C++G+ K A   F+ + +  +   VVTYNI++  LC    +G++ +A  LF
Sbjct: 292 NTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 349



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 176/310 (56%), Gaps = 4/310 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN +TY  ++ GLC  G +  A+ L+ +M     +P+VVTYN+L+HGFC   + +EA  +
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F   + +G  P+VV++N ++N  CK  K+DEA R+L+ M+   + P+   YN+L++G C 
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVV 236
            GRV+ A  L V     G   NV +YS LI+G C+  + +  AL L+  +L +G +P+V 
Sbjct: 128 NGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVP 184

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN L  GL +  +V  AF+LF  + +HG+  D   Y  FIDGLCK G + +A+ + + +
Sbjct: 185 TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDM 244

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+ ++N +I+GLCK  R+  A  L   +       + +++N +I   C  GK 
Sbjct: 245 DEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKW 304

Query: 357 DKARDLFLDM 366
            KA   F +M
Sbjct: 305 KKAMTTFKEM 314



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 185/352 (52%), Gaps = 13/352 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++      P+V TYN+L+NGLC+ G    A  L  +             PN +
Sbjct: 98  EAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKG---------FSPNVI 148

Query: 62  TYTTIIDGLCKE-GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY+T+I GLC+E   V +A +LF  +  +   P V TYN LI G    +  NEA  LF  
Sbjct: 149 TYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG 208

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++  G++P+ +++ V ++ LCK G++++A  +L+ M + G  P+   +N +++G C   R
Sbjct: 209 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKR 268

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ AE L   ME+ GC  N  S++ LI G C+  + + A++ + EML +G+KP VV YN 
Sbjct: 269 VDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNI 328

Query: 241 LFIGLFEIHQ---VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           L  GL +  Q   ++ A  LFD M   G   D   Y   IDGL K G + +A  L   + 
Sbjct: 329 LVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
                 ++  YN LI GLC   ++  A ELF ++     + D +TY  +I A
Sbjct: 389 AKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 159/285 (55%), Gaps = 4/285 (1%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M+     PN +TYN+L+ G C     ++A+ L+  M+  G  P+VV++N +++  CK G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +DEA ++ +  ++ G  P+   YN L++GFC   +++ A+ +   M S     +V +Y+ 
Sbjct: 61  LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL-FEIHQVERAFKLFDEMQRH 264
           L+NG CKN  ++ A  L   ++ KG  P+V+ Y+TL  GL  E+  V  A KLF  + + 
Sbjct: 121 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   +   Y   IDGL K   + EA ELF  L     E D   Y   IDGLCK+GR++ A
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 237

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + + +     + DVV++N +I+ LC + ++D+A  L   MEAK
Sbjct: 238 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAK 282


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/349 (33%), Positives = 188/349 (53%), Gaps = 6/349 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  LI   C+      A+ L +EM N         KP+ VTY  +I+G+CKEG
Sbjct: 247 CYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGS------KPDVVTYNVLINGICKEG 300

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A +    M      PNV+T+N ++   C    W +A+ L  +M+ +G  P+VV+FN
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++N LC+ G +  A  +LE M   G  PN+  YN L+ GFC   +++RA E    M S 
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ L+   CK+ +++ A+ + +++ SKG  P ++ YNT+  GL ++ + ERA
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            KL DEM+R G+  D   Y + + GL + G + EA++ F  L  L    +   YN ++ G
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLG 540

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCKS +   A +    +          TY I+I  +  +G   +A DL 
Sbjct: 541 LCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 589



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 190/353 (53%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNT++  LC +G    A+ + +       +    C P+ +TYT +I+  CKE  V
Sbjct: 214 PDVVTYNTILRTLCDSGKLKQAMEVLDR------QLQKECYPDVITYTILIEATCKESGV 267

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A +L  +M+++   P+VVTYN LI+G C     +EA      M   G QPNV++ N+I
Sbjct: 268 GQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 327

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++   M   GC
Sbjct: 328 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 387

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N  SY+ L++G+CK K+++ A+     M+S+G  PD+V YNTL   L +  +V+ A +
Sbjct: 388 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 447

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + +++   G +     Y T IDGL K G    A++L   +R    + DI  Y+ L+ GL 
Sbjct: 448 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 507

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + G++  A + F  L    +  + +TYN ++  LC   + D+A D    M +K
Sbjct: 508 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 560



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/387 (30%), Positives = 190/387 (49%), Gaps = 44/387 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++    +LI G CR G T  A  + E +     + G V  P+ +TY  +I G CK G +
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILE----QSGAV--PDVITYNVLISGYCKSGEI 200

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN------------------------ 112
           D A ++  +M   N+ P+VVTYN+++   C +                            
Sbjct: 201 DNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTIL 257

Query: 113 -EAKC----------LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
            EA C          L  EM ++G +P+VV++NV++N +CK G++DEA + L  M   G 
Sbjct: 258 IEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 317

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
           +PN   +N ++   C TGR   AE+L   M   GC  +V +++ILIN  C+   +  A+ 
Sbjct: 318 QPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAID 377

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +  +M   G  P+ + YN L  G  +  +++RA +  D M   G   D   Y T +  LC
Sbjct: 378 ILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALC 437

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K+G +  AVE+   L        +  YN +IDGL K G+ + A +L   + R  L  D++
Sbjct: 438 KDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDII 497

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEA 368
           TY+ ++  L  +GK+D+A   F D+E 
Sbjct: 498 TYSSLVSGLSREGKVDEAIKFFHDLEG 524



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 146/277 (52%), Gaps = 6/277 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   GC P+V T+N LIN LCR G    A+++ E+M          C PN+
Sbjct: 338 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG------CTPNS 391

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G CKE  +D+A E    M      P++VTYN+L+   C     + A  +  +
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK + A +LL+ M + G++P+   Y++L+ G    G+
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A + F  +E +G + N  +Y+ ++ G CK+++ + A+   + M+SK  KP    Y  
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L  G+      + A  L +E+   G+   + A +  +
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 608



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 126/233 (54%), Gaps = 3/233 (1%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L +NG++++  + LE M+  G  P+     +L+ GFC  G+  +A  +   +E  G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y++LI+GYCK+ EI+ AL +   M    + PDVV YNT+   L +  ++++A +
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + D   +     D   Y   I+  CK   + +A++L   +R    + D+  YN LI+G+C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K GRL  A +   ++P      +V+T+NI++ ++C+ G+   A  L  DM  K
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 350


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 196/361 (54%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L ++LR FG  PNV  Y TLI+G C+ G    A +LF EM    G+FG+V   N  TYT 
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKFGLVA--NEWTYTV 238

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL K G   +  E++ KM++  + PN+ TYN +++  C      +A  +F EM ++G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V  N+V++N ++  LC+  K +EA+++++ M    + PN   YNTL+DGFC  G++ +A 
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKAL 358

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   ++S G   ++ +Y++L++G+C+  +  GA  +  EM  +GIKP  V Y  L    
Sbjct: 359 SLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                +E A +L   M+  G+  D   Y   I G C  G + EA  LF+++     E + 
Sbjct: 419 ARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNE 478

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I G CK G    A  LFR +    L  +V +Y+ +I  LC + K+ +A DL   
Sbjct: 479 VIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEK 538

Query: 366 M 366
           M
Sbjct: 539 M 539



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 186/352 (52%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V+++  +I G C  G    + +L  E+     EFG    PN V YTT+IDG CK+G ++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELR----EFGF--SPNVVIYTTLIDGCCKKGEIE 215

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KAK+LF +M    +  N  TY  LIHG        +   ++ +M + GV PN+ ++N +M
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N+LCK+G+  +A ++ + M + GV  N   YNTL+ G C   + N A ++   M+S    
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ LI+G+C   ++  ALSL  ++ S+G+ P +V YN L  G         A K+
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+  G+      Y   ID   ++  +  A++L  ++  L    D+  Y+ LI G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G++  A  LF+S+   +L  + V YN MI   C +G   +A  LF DME K
Sbjct: 456 KGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK 507



 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 159/313 (50%), Gaps = 1/313 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           K  +  Y  II+   +   +D +   F +M D+   P    +N+L+     ++ +N+  C
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            F E   + V  +V SF +++   C+ G+++++  LL  + + G  PN  +Y TL+DG C
Sbjct: 151 FFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G + +A++LF  M   G   N ++Y++LI+G  KN   +    +Y +M   G+ P++ 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLY 269

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +   L +  + + AFK+FDEM+  GV+ +   Y T I GLC+     EA ++   +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      ++  YN LIDG C  G+L  A  L R L    L   +VTYN+++   C  G  
Sbjct: 330 KSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDT 389

Query: 357 DKARDLFLDMEAK 369
             A  +  +ME +
Sbjct: 390 SGAAKMVKEMEER 402



 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 149/270 (55%), Gaps = 7/270 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G   N+ TYNTLI GLCR      A  + ++M +       V  PN +
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKS------YVINPNLI 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG C  G + KA  L   +K   ++P++VTYN L+ GFC   D + A  +  EM
Sbjct: 340 TYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+ V++ ++++   ++  M+ A +L   M ++G+ P+   Y+ L+ GFC+ G++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  LF SM     + N   Y+ +I GYCK      AL L+ +M  K + P+V  Y+ L
Sbjct: 460 NEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYL 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV-AADT 270
              L +  +++ A  L ++M   G+  +DT
Sbjct: 520 IRVLCKERKLKEAEDLVEKMIDSGIDPSDT 549



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 147/304 (48%), Gaps = 1/304 (0%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G  +  F   +  L    + E        Y  +I+ +  +   + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P    FN ++  +  +   ++         +I V  + + +  ++ G C  G + ++ 
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ESKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L V +   G   NV  Y+ LI+G CK  EIE A  L+ EM   G+  +   Y  L  GL
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           F+    ++ F+++++MQ HGV  + + Y   ++ LCK+G   +A ++F  +R      +I
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNI 303

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN LI GLC+  +   A ++   +   V+  +++TYN +I   C+ GK+ KA  L  D
Sbjct: 304 VTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRD 363

Query: 366 MEAK 369
           ++++
Sbjct: 364 LKSR 367


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/361 (35%), Positives = 195/361 (54%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L ++LR FG  PNV  Y TLI+G C+ G    A +LF EM    G+FG+V   N  TYT 
Sbjct: 185 LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKFGLVA--NEWTYTV 238

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL K G   +  E++ KM++  + PN+ TYN +++  C      +A  +F EM ++G
Sbjct: 239 LIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERG 298

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V  N+V++N ++  LC+  K +EA+ +++ M   G+ PN   YNTL+DGFC   ++ +A 
Sbjct: 299 VSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKAL 358

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   ++S G   ++ +Y+IL++G+CK  +  GA  +  EM  +GIKP  V Y  L    
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTF 418

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                +E+A +L   M+  G+  D   Y   I G C  G + EA  LF+++   K+E + 
Sbjct: 419 ARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNE 478

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN ++ G CK G    A  LFR +    L  +V +Y  MI  LC + K  +A  L   
Sbjct: 479 VIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEK 538

Query: 366 M 366
           M
Sbjct: 539 M 539



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 188/352 (53%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V+++  +I G C  G    + +L  E+     EFG    PN V YTT+IDG CK+G ++
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELR----EFGF--SPNVVIYTTLIDGCCKKGEIE 215

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KAK+LF +M    +  N  TY  LIHG        +   ++ +M + GV PN+ ++N +M
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N+LCK+G+  +A ++ + M + GV  N   YNTL+ G C   + N A E+   M+S G  
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ LI+G+C  +++  ALSL  ++ S+G+ P +V YN L  G  +      A K+
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+  G+      Y   ID   ++  + +A++L  ++  L    D+  Y+ LI G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            GR+  A  LF+S+       + V YN M+   C +G   +A  LF +ME K
Sbjct: 456 KGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEK 507



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 168/323 (52%), Gaps = 41/323 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLING--------------------------------- 28
           +A  LF ++  FG   N +TY  LI+G                                 
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 29  --LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
             LC+ G T  A  +F+EM     E GV C  N VTY T+I GLC+E   ++A E+  +M
Sbjct: 276 NQLCKDGRTKDAFKVFDEMR----ERGVSC--NIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           K + INPN++TYN+LI GFC      +A  L  ++  +G+ P++V++N++++  CK G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
             A ++++ M + G++P+   Y  L+D F  +  + +A +L  SME +G   +V +YS+L
Sbjct: 390 SGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVL 449

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+C    +  A  L+  M+ K  +P+ VIYNT+ +G  +     RA +LF EM+   +
Sbjct: 450 IHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 267 AADTWAYRTFIDGLCKNGYIVEA 289
             +  +YR  I+ LCK     EA
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEA 532



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 158/313 (50%), Gaps = 1/313 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           K  +  Y  II+   +   +D +   F +M D+   P    +N+L+     ++ +N+  C
Sbjct: 91  KTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWC 150

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            F E   + V  +V SF +++   C+ G+++++  LL  + + G  PN  +Y TL+DG C
Sbjct: 151 FFNESKIK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCC 209

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G + +A++LF  M   G   N ++Y++LI+G  KN   +    +Y +M   G+ P++ 
Sbjct: 210 KKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLH 269

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +   L +  + + AFK+FDEM+  GV+ +   Y T I GLC+     EA E+   +
Sbjct: 270 TYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQM 329

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      ++  YN LIDG C   +L  A  L R L    L   +VTYNI++   C  G  
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389

Query: 357 DKARDLFLDMEAK 369
             A  +  +ME +
Sbjct: 390 SGAGKVVKEMEER 402



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 143/268 (53%), Gaps = 6/268 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G   N+ TYNTLI GLCR      A  + ++M +          PN +
Sbjct: 286 DAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDG------INPNLI 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG C    + KA  L   +K   ++P++VTYN L+ GFC   D + A  +  EM
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+ V++ ++++   ++  M++A +L   M ++G+ P+   Y+ L+ GFC+ GR+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRM 459

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  LF SM     + N   Y+ ++ GYCK      AL L+ EM  K + P+V  Y  +
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
              L +  + + A  L ++M   G+   
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDSGIGPS 547



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 127/238 (53%), Gaps = 6/238 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  +++  G  PN+ TYNTLI+G C       AL+L  ++ +          P+ V
Sbjct: 321 EANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRG------LSPSLV 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G CK+G    A ++  +M++  I P+ VTY  LI  F  +++  +A  L   M
Sbjct: 375 TYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+V +++V+++  C  G+M+EASRL + M++    PN  +YNT++ G+C  G  
Sbjct: 435 EELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSS 494

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            RA  LF  ME      NV SY  +I   CK ++ + A  L  +M+  GI P   I N
Sbjct: 495 YRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILN 552



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 143/304 (47%), Gaps = 1/304 (0%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G  +  F   +  L    + E        Y  +I+ +  +   + +   F EM+D+G
Sbjct: 65  VISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKG 124

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P    FN ++  +  +   ++         +I V  + + +  ++ G C  G + ++ 
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWCFFN-ESKIKVVLDVYSFGIVIKGCCEAGEIEKSF 183

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L V +   G   NV  Y+ LI+G CK  EIE A  L+ EM   G+  +   Y  L  GL
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           F+    ++ F+++++MQ HGV  +   Y   ++ LCK+G   +A ++F  +R      +I
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNI 303

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN LI GLC+  +   A E+   +    +  +++TYN +I   C   K+ KA  L  D
Sbjct: 304 VTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRD 363

Query: 366 MEAK 369
           ++++
Sbjct: 364 LKSR 367


>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 426

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/372 (34%), Positives = 211/372 (56%), Gaps = 15/372 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANG----NGEFGVV-- 55
           A ++  K+   G +P+  T  TL+ GLC       AL+  ++ +A G    N  +G +  
Sbjct: 29  AFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAKGFRLDNVSYGTLIN 88

Query: 56  --CK------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
             CK      P+   Y+ II+ LCK+  V  A +L+ +M  + I P+VVTYN+LI+GFC 
Sbjct: 89  GLCKSGETKAPDQFMYSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCI 148

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
                +A  LF EM  + + PNV SFN++++ LCK G +     +L +MI+  V+P+   
Sbjct: 149 VGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVT 208

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            ++L+DG+ L  + N+A  +F +M   G   ++ SY+I+ING  K K ++ A+ L+ EM 
Sbjct: 209 CSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQ 268

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            K + PD + Y+TL  GL ++ ++   + L DEM+  G +A+   Y + ++ LCK+G+  
Sbjct: 269 FKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFD 328

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            A+ +F  ++   +E ++  YN L+DGLCK+GRLK A E+F  L       DV  Y +MI
Sbjct: 329 TAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMI 388

Query: 348 HALCADGKMDKA 359
           + LC +   D+A
Sbjct: 389 NGLCREALFDEA 400



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 174/340 (51%), Gaps = 21/340 (6%)

Query: 37  VALNLFEEMANGNGEFGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           + +N F  +   N  F V+ K       P+TVT TT++ GLC    V KA      +  +
Sbjct: 15  ILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKALHFHDDVIAK 74

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
               + V+Y +LI+G C + +                 P+   +++I+N LCK+  + +A
Sbjct: 75  GFRLDNVSYGTLINGLCKSGETKA--------------PDQFMYSMIINRLCKDKLVVDA 120

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             L   M+   + P+   YNTL+ GFC+ G++  A  LF  M       NV S++ILI+G
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK  +++G  S+ + M+ + +KPDVV  ++L  G F + +  +A  +F+ M ++GV  D
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTID 240

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
             +Y   I+GL K   + EAV LF+ ++      D   Y+ LIDGL K GR+   W+L  
Sbjct: 241 LRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLID 300

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +      A+V+TY+ +++ LC  G  D A  +F  ++ K
Sbjct: 301 EMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDK 340



 Score =  165 bits (418), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 164/307 (53%), Gaps = 8/307 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L+ ++ V    P+V TYNTLI G C  G    A+ LF EM   N        PN 
Sbjct: 118 VDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN------IVPNV 171

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            ++  +IDGLCKEG V   K +   M  +++ P+VVT +SLI G+      N+A+ +F  
Sbjct: 172 CSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNA 231

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV  ++ S+N+++N L K   +DEA  L + M    + P+   Y+TL+DG    GR
Sbjct: 232 MAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGR 291

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++   +L   M + G   NV +YS L+N  CK+   + A+ +++++  KG +P++V YN 
Sbjct: 292 ISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNI 351

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +++ A ++F ++   G   D   Y   I+GLC+     EA     T   + 
Sbjct: 352 LVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAYGC--TPNAVT 409

Query: 301 YELDIRA 307
           YE+ IRA
Sbjct: 410 YEIIIRA 416



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 141/284 (49%), Gaps = 14/284 (4%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M+   I  +++  + LI+ F +    N A  +  +++  G QP+ V+   ++  LC N +
Sbjct: 1   MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           + +A    + +I  G R +   Y TL++G C +G     ++              F YS+
Sbjct: 61  VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQ--------------FMYSM 106

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +IN  CK+K +  A  LY EM+ K I PDVV YNTL  G   + Q+E A +LF+EM+   
Sbjct: 107 IINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKN 166

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +  ++   IDGLCK G +     +   +     + D+   + LIDG     +   A 
Sbjct: 167 IVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKAR 226

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +F ++ +  +  D+ +YNIMI+ L     +D+A  LF +M+ K
Sbjct: 227 YIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFK 270



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/214 (30%), Positives = 121/214 (56%), Gaps = 15/214 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   G   ++ +YN +INGL +      A+ LF+EM     +F  +  P+T+
Sbjct: 224 KARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEM-----QFKSMT-PDTI 277

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+IDGL K G +    +L  +M+    + NV+TY+SL++  C +  ++ A  +F ++
Sbjct: 278 TYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKI 337

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G +PN+V++N++++ LCKNG++ +A  +   ++  G R +  +Y  +++G C     
Sbjct: 338 KDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLC----- 392

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
              E LF   E+ GC  N  +Y I+I    KN +
Sbjct: 393 --REALF--DEAYGCTPNAVTYEIIIRALFKNDK 422


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 189/358 (52%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++    C P+   YN LI GLC+ G    A N+ + M   +      C P+ +
Sbjct: 110 EAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERS------CVPDVI 163

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I G C+   +D+A++L  KMK+  + P+ V YN+L++G C  N   E   L  EM
Sbjct: 164 TYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEM 223

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P+  S+N ++  LC++GK +EA ++LE MI+    P+   YN+LMDGFC   ++
Sbjct: 224 VEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKM 283

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + AE L   M    C   V +Y+ LI G+ +   +  A  +  +M   GI PD+V YN L
Sbjct: 284 DEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCL 343

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A +L + M     A D   Y   ++GLCK G + +A  L   +     
Sbjct: 344 LDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGC 403

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + ++  +N +IDG CK+G++    ++   +       DVVTY+ +I   C   +M  A
Sbjct: 404 QPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA 461



 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 189/349 (54%), Gaps = 6/349 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P  FTY  LI+GLC+      A  L +EM   +      C P+   Y  +I GLCK G
Sbjct: 88  CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKD------CHPDAAVYNCLIAGLCKMG 141

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D A+ +   M + +  P+V+TY SLI G C  N  +EA+ L  +M + G+ P+ V++N
Sbjct: 142 KIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYN 201

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N LCK  +++E S+LLE M++ G  P+ F YNT++   C +G+   A ++   M   
Sbjct: 202 ALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEK 261

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
            C  +V +Y+ L++G+CK  +++ A  L  +M+ +   P V+ Y TL  G     ++  A
Sbjct: 262 KCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADA 321

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           +++ ++M + G++ D   Y   +DGLCK G + EA EL   +       D+  Y+ L++G
Sbjct: 322 YRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNG 381

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCK G++  A  L   +       ++VT+N MI   C  GK+D+   + 
Sbjct: 382 LCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVL 430



 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 194/365 (53%), Gaps = 12/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+    C P+V TYN+L++G C+      A  L E+M       G  C P  +
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDM------VGRRCAPTVI 303

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I G  +   +  A  +   M    I+P++VTYN L+ G C A    EA  L   M
Sbjct: 304 TYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVM 363

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++   P+VV++++++N LCK GK+D+A  LLE+M++ G +PN   +NT++DGFC  G+V
Sbjct: 364 VEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKV 423

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +   ++   M+ + C  +V +YS LI+GYCK   ++ A ++       GI PD   Y+++
Sbjct: 424 DEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSM 477

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +VE A ++ D M + G    +  Y   I GLC      EA+++ + +     
Sbjct: 478 LEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGC 537

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E ++  Y+ LI+GLCK+ R++ A  +   +     + DV TY  +I   C   KMD A  
Sbjct: 538 EPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQ 597

Query: 362 LFLDM 366
            F  M
Sbjct: 598 CFKTM 602



 Score =  209 bits (532), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 188/378 (49%), Gaps = 35/378 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +    C P V TY TLI G  R      A  + E+M      F     P+ V
Sbjct: 285 EAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDM------FKAGISPDLV 338

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++DGLCK G +++A EL   M +++  P+VVTY+ L++G C     ++A+ L   M
Sbjct: 339 TYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMM 398

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC----- 176
           +++G QPN+V+FN +++  CK GK+DE  ++LELM ++   P+   Y+TL+DG+C     
Sbjct: 399 LERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRM 458

Query: 177 ------------------------LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
                                    TG+V  A+E+   M   GC      Y+++I G C 
Sbjct: 459 QDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCD 518

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +  + AL +   M  +G +P++  Y+ L  GL +  +VE A  + D M   G   D   
Sbjct: 519 VERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVAT 578

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + IDG CK   +  A + F+T+R    E D  AYN LI G C+SG ++ A E+ + + 
Sbjct: 579 YTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLML 638

Query: 333 RGVLIADVVTYNIMIHAL 350
                 D  TY  ++ +L
Sbjct: 639 EKGCNPDAATYFSLMRSL 656



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 184/350 (52%), Gaps = 9/350 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V T+NT++   C+ G    AL+ F           + C P   TY  +I GLC+   +
Sbjct: 57  PDVITHNTILKAYCQIGDLDRALSHFRG--------KMWCSPTAFTYCILIHGLCQCQRI 108

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A +L  +M  ++ +P+   YN LI G C     + A+ +   M+++   P+V+++  +
Sbjct: 109 DEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSL 168

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C+   +DEA +L+E M + G+ P+   YN L++G C   ++    +L   M   G 
Sbjct: 169 IVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGR 228

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + + FSY+ ++   C++ + E A  +  +M+ K   PDVV YN+L  G  ++ +++ A +
Sbjct: 229 EPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAER 288

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L ++M     A     Y T I G  +   + +A  +   +       D+  YNCL+DGLC
Sbjct: 289 LLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLC 348

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K+G+L+ A EL   +       DVVTY+I+++ LC  GK+D AR L L+M
Sbjct: 349 KAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDAR-LLLEM 397



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/289 (25%), Positives = 123/289 (42%), Gaps = 37/289 (12%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           E    F E      +P+  ++  ++    + G       +   M+     P+   +NT++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             +C  G ++RA   F     M C    F+Y ILI+G C+ + I+ A  L  EM+ K   
Sbjct: 67  KAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCH 124

Query: 233 PDVVIYNTLFIGLFEIHQV-----------------------------------ERAFKL 257
           PD  +YN L  GL ++ ++                                   + A KL
Sbjct: 125 PDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL 184

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            ++M+  G+  DT AY   ++GLCK   + E  +L   +     E D  +YN ++  LC+
Sbjct: 185 MEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCE 244

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           SG+ + A ++   +       DVVTYN ++   C   KMD+A  L  DM
Sbjct: 245 SGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDM 293



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 73/189 (38%), Gaps = 34/189 (17%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K + +EG  S + E  S   KP    Y  L  G       +   ++ +EM     + D  
Sbjct: 2   KVRPLEG-YSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVI 60

Query: 272 AYRTFIDGLCKNGYIVEAVELFR----------TLRIL------------KYEL------ 303
            + T +   C+ G +  A+  FR          T  IL             Y+L      
Sbjct: 61  THNTILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQ 120

Query: 304 -----DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D   YNCLI GLCK G++  A  + + +     + DV+TY  +I   C    +D+
Sbjct: 121 KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDE 180

Query: 359 ARDLFLDME 367
           AR L   M+
Sbjct: 181 ARKLMEKMK 189



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 7/74 (9%)

Query: 1   MEAA-ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+AA   F  +R  GCEP+   YN LI+G C++G+   A+ + + M          C P+
Sbjct: 592 MDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKG------CNPD 645

Query: 60  TVTYTTIIDGLCKE 73
             TY +++  L  E
Sbjct: 646 AATYFSLMRSLTTE 659


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 198/377 (52%), Gaps = 15/377 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++M++R  G + +V+TY   I   C+T     AL L   M     E G  C  N V
Sbjct: 129 QAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMP----ELG--CDSNAV 182

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ GL   G  D A+ELF +M    + P+VV +N L+H  C      E++ L  ++
Sbjct: 183 AYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKV 242

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------EASRLLELMIQIGVRPNAFVYNTLM 172
           + +GV PN+ +FN+ +  LC+ G +D         EA   L  M+  G  P+   YN+++
Sbjct: 243 LKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSII 302

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           DG+C  G V  A  +       G K + F+Y  LING+CK+ + + A++++ + L KG++
Sbjct: 303 DGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLR 362

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P +V+YNTL  GL +   +  A +L +EM  +G   + W Y   I+GLCK G + +A  L
Sbjct: 363 PSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHL 422

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
                      DI  YN LIDG CK  +L  A E+   +    +  DV+TYN +++ LC 
Sbjct: 423 VDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCK 482

Query: 353 DGKMDKARDLFLDMEAK 369
            GK ++  ++F  ME K
Sbjct: 483 AGKSEEVMEIFKAMEEK 499



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/376 (31%), Positives = 195/376 (51%), Gaps = 16/376 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG---------HTIVALNLFEEMANGNGEF 52
           E+  L  K+   G  PN+FT+N  + GLCR G           + A     +M NG  E 
Sbjct: 234 ESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFE- 292

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
                P+ +TY +IIDG CK+G V  A  +      +   P+  TY SLI+GFC   D +
Sbjct: 293 -----PDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPD 347

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
            A  +F + + +G++P++V +N ++  L + G +  A +L+  M + G  PN + YN ++
Sbjct: 348 RAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVI 407

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +G C  G V+ A  L     + GC  ++F+Y+ LI+GYCK  +++ A  + + M S+G+ 
Sbjct: 408 NGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMT 467

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PDV+ YNTL  GL +  + E   ++F  M+  G   +   Y   +D LCK   + EAV+L
Sbjct: 468 PDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDL 527

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV-TYNIMIHALC 351
              ++    + D+ ++  L  G CK G +  A++LFR + +   +     TYNI++ A  
Sbjct: 528 LGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFS 587

Query: 352 ADGKMDKARDLFLDME 367
               M+ A  LF  M+
Sbjct: 588 EQLNMNMAMKLFSVMK 603



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 194/361 (53%), Gaps = 8/361 (2%)

Query: 1   MEAAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A   +K  VF G +P+ FTY +LING C+ G    A+ +F++        G   +P+
Sbjct: 311 VQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD------GLGKGLRPS 364

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y T+I GL ++G +  A +L  +M +    PN+ TYN +I+G C     ++A  L  
Sbjct: 365 IVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVD 424

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           + + +G  P++ ++N +++  CK  K+D A+ ++  M   G+ P+   YNTL++G C  G
Sbjct: 425 DAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAG 484

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +     E+F +ME  GC  N+ +Y+I+++  CK K++  A+ L  EM SKG+KPDVV + 
Sbjct: 485 KSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFG 544

Query: 240 TLFIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           TLF G  +I  ++ A++LF  M++ + V   T  Y   +    +   +  A++LF  ++ 
Sbjct: 545 TLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKN 604

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D   Y  +IDG CK G +   ++          I  + T+  +++ LC   K+ +
Sbjct: 605 SGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHE 664

Query: 359 A 359
           A
Sbjct: 665 A 665



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 162/293 (55%), Gaps = 11/293 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPN 59
           + A  L  ++   GC PN++TYN +INGLC+ G    A +L ++ +A G       C P+
Sbjct: 382 LPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKG-------CPPD 434

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY T+IDG CK+  +D A E+  +M  + + P+V+TYN+L++G C A    E   +F 
Sbjct: 435 IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFK 494

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M ++G  PN++++N+I++ LCK  K++EA  LL  M   G++P+   + TL  GFC  G
Sbjct: 495 AMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIG 554

Query: 180 RVNRAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            ++ A +LF  ME      H   +Y+I+++ + +   +  A+ L+S M + G  PD   Y
Sbjct: 555 DIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTY 614

Query: 239 NTLFIGLFEIHQVERAFK-LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             +  G  ++  + + +K L + M++  + + T   R  ++ LC    + EAV
Sbjct: 615 RVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRV-LNCLCVKDKVHEAV 666



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 155/339 (45%), Gaps = 17/339 (5%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV- 96
           AL +F    + +G      K    TY  I+  L   G  ++ ++L  +M+ EN+N  ++ 
Sbjct: 23  ALEMFNSAKSEDG-----FKHTASTYKCIVQKLGHHGEFEEMEKLLSEMR-ENVNNALLE 76

Query: 97  -TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
             Y   +  +       EA   F  M      P+V S N IMN L + G  ++A ++   
Sbjct: 77  GAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMR 136

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   GV+ + + Y   +  FC T R   A  L  +M  +GC  N  +Y  ++ G   + E
Sbjct: 137 MRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            + A  L+ EML++ + PDVV +N L   L +   V  + +L  ++ + GV  + + +  
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 276 FIDGLCKNG---------YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           F+ GLC+ G          +VEA E  R +    +E D   YN +IDG CK G ++ A  
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           + +         D  TY  +I+  C DG  D+A  +F D
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD 355



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 126/265 (47%), Gaps = 44/265 (16%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++FTYNTLI+G C+     + L+   EM N     G+   P+ +TY T+++GLCK 
Sbjct: 430 GCPPDIFTYNTLIDGYCKQ----LKLDSATEMVNRMWSQGMT--PDVITYNTLLNGLCKA 483

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  ++  E+F  M+++   PN++TYN ++   C A   NEA  L  EM  +G++P+VVSF
Sbjct: 484 GKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSF 543

Query: 134 NVIMNELCKNGKMDEA------------------------------------SRLLELMI 157
             +    CK G +D A                                     +L  +M 
Sbjct: 544 GTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMK 603

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  P+ + Y  ++DGFC  G + +  +  +         ++ ++  ++N  C   ++ 
Sbjct: 604 NSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVH 663

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ +   ML KGI P+ V  NT+F
Sbjct: 664 EAVGIIHLMLQKGIVPETV--NTIF 686



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 42/198 (21%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   +F  +   GC PN+ TYN +++ LC+      A++L  EM +         KP+ V
Sbjct: 488 EVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKG------LKPDVV 541

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM----------------------------------- 86
           ++ T+  G CK G +D A +LF +M                                   
Sbjct: 542 SFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSV 601

Query: 87  -KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
            K+   +P+  TY  +I GFC   +  +     +E M++   P++ +F  ++N LC   K
Sbjct: 602 MKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDK 661

Query: 146 MDEASRLLELMIQIGVRP 163
           + EA  ++ LM+Q G+ P
Sbjct: 662 VHEAVGIIHLMLQKGIVP 679



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 16/196 (8%)

Query: 183 RAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +A E+F S +S  G KH   +Y  ++     + E E    L SEM          + N L
Sbjct: 22  KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN-------VNNAL 74

Query: 242 FIGLF--------EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
             G +           +V+ A   F+ M  +       ++   ++ L + GY  +A +++
Sbjct: 75  LEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVY 134

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +R    + D+  Y   I   CK+ R   A  L R++P     ++ V Y  ++  L   
Sbjct: 135 MRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDS 194

Query: 354 GKMDKARDLFLDMEAK 369
           G+ D AR+LF +M A+
Sbjct: 195 GEHDHARELFDEMLAR 210


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  225 bits (574), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/357 (35%), Positives = 197/357 (55%), Gaps = 9/357 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PN+ T+N  INGLC+ G    A ++ E++      +G    PN VTY T+IDG CK+G 
Sbjct: 197 QPNLTTFNIFINGLCKAGKLNKAEDVIEDIK----AWGF--SPNIVTYNTLIDGHCKKGS 250

Query: 76  VDK---AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
             K   A  +  +M    I PN +T+N+LI GFC   +   AK  F EM  QG++PN+V+
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++N L  NGK+DEA  L + M+ +G++PN   +N L++GFC    +  A +LF  + 
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 N  +++ +I+ +CK   +E   +L++ ML +GI P+V  YN L  GL     V 
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVR 430

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A KL +EM+ + + AD   Y   I G CK+G   +A +L   +  +  + +   YN L+
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DG C  G LK A ++   + +    A+VVTYN++I   C  GK++ A  L  +M  K
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEK 547



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 189/349 (54%), Gaps = 11/349 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHT---IVALNLFEEM-ANGNGEFGVVCK 57
           +A  +   ++ +G  PN+ TYNTLI+G C+ G       A  + +EM AN       +C 
Sbjct: 218 KAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANK------IC- 270

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN +T+ T+IDG CK+  V  AK  F +M+ + + PN+VTYNSLI+G       +EA  L
Sbjct: 271 PNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIAL 330

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + +M+  G++PN+V+FN ++N  CK   + EA +L + + +  + PNA  +NT++D FC 
Sbjct: 331 WDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCK 390

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G +     L  SM   G   NV +Y+ LI G C+N+ +  A  L +EM +  +K DVV 
Sbjct: 391 AGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVT 450

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G  +  +  +A KL  EM   GV  +   Y T +DG C  G +  A+++   + 
Sbjct: 451 YNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQME 510

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
                 ++  YN LI G CK+G+L+ A  L   +    L  +  TY+++
Sbjct: 511 KEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/246 (39%), Positives = 148/246 (60%), Gaps = 6/246 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL+ K+   G +PN+ T+N LING C+      A  LF+++A    E  +V  PN +
Sbjct: 326 EAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA----EQDLV--PNAI 379

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+ID  CK G +++   L   M DE I PNV TYN LI G C   +   AK L  EM
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  ++ +VV++N+++   CK+G+  +A +LL  M+ +GV+PN   YNTLMDG+C+ G +
Sbjct: 440 ENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNL 499

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   ME  G + NV +Y++LI G+CK  ++E A  L +EML KG+ P+   Y+ +
Sbjct: 500 KAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559

Query: 242 FIGLFE 247
            + + E
Sbjct: 560 RLEMLE 565



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 163/288 (56%), Gaps = 6/288 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A   F +++  G +PN+ TYN+LINGL   G    A+ L+++M       G+  KPN 
Sbjct: 290 LAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV------GLGLKPNI 343

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT+  +I+G CK+  + +A++LF  + ++++ PN +T+N++I  FC A    E   L   
Sbjct: 344 VTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNS 403

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G+ PNV ++N ++  LC+N  +  A +LL  M    ++ +   YN L+ G+C  G 
Sbjct: 404 MLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGE 463

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            ++AE+L   M ++G K N  +Y+ L++GYC    ++ AL + ++M  +G + +VV YN 
Sbjct: 464 PSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNV 523

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           L  G  +  ++E A +L +EM   G+  +   Y      + + G+I +
Sbjct: 524 LIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 163/329 (49%), Gaps = 38/329 (11%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A E+F +++D     ++ + N L+      N+  E + ++ EM+ + +QPN+ +FN+
Sbjct: 146 IHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNI 205

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR------------ 183
            +N LCK GK+++A  ++E +   G  PN   YNTL+DG C  G   +            
Sbjct: 206 FINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEML 265

Query: 184 --------------------------AEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                                     A+  F  M+  G K N+ +Y+ LING   N +++
Sbjct: 266 ANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLD 325

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A++L+ +M+  G+KP++V +N L  G  +   ++ A KLFD++    +  +   + T I
Sbjct: 326 EAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMI 385

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           D  CK G + E   L  ++       ++  YNCLI GLC++  ++ A +L   +    L 
Sbjct: 386 DAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELK 445

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ADVVTYNI+I   C DG+  KA  L  +M
Sbjct: 446 ADVVTYNILIGGWCKDGEPSKAEKLLGEM 474



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 121/238 (50%), Gaps = 12/238 (5%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRP--NAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++L KN K   +S    L++  G RP  NA + + L+  +     ++ A E+F  ++  
Sbjct: 101 LDKLVKNEKHTVSSVFHSLLLG-GDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDY 159

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G K ++ S + L++   K  E      +Y EM+ + I+P++  +N    GL +  ++ +A
Sbjct: 160 GFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKA 219

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR------AY 308
             + ++++  G + +   Y T IDG CK G    A +++R   ILK  L  +       +
Sbjct: 220 EDVIEDIKAWGFSPNIVTYNTLIDGHCKKG---SAGKMYRADAILKEMLANKICPNEITF 276

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N LIDG CK   +  A   F  + R  L  ++VTYN +I+ L  +GK+D+A  L+  M
Sbjct: 277 NTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKM 334



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 82/174 (47%), Gaps = 3/174 (1%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N     +L+  Y  N EI  A  ++  +   G K  +   N L   L + ++      ++
Sbjct: 129 NALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVY 188

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK- 317
            EM +  +  +   +  FI+GLCK G + +A ++   ++   +  +I  YN LIDG CK 
Sbjct: 189 KEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKK 248

Query: 318 --SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +G++  A  + + +    +  + +T+N +I   C D  +  A++ F +M+ +
Sbjct: 249 GSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQ 302


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 129/356 (36%), Positives = 194/356 (54%), Gaps = 9/356 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN+ T+NT+INGLC+ G    A ++ ++M      +G    PN VTY T+IDG CK G V
Sbjct: 228 PNLITFNTVINGLCKVGKLNKAGDVVDDMK----VWGFW--PNVVTYNTLIDGYCKMGRV 281

Query: 77  DK---AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            K   A  +  +M +  ++PN VT+N LI GFC   + + A  +F EM  QG++P VV++
Sbjct: 282 GKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTY 341

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LC  GK++EA  LL+ M+   ++PN   YN L++G+C    +  A ELF ++  
Sbjct: 342 NSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGK 401

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV +++ L++GYCK  ++E A  L   ML KG  P+   YN L +G     ++E 
Sbjct: 402 QGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEE 461

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              L +EMQ  GV ADT  Y   I   C+     +A  L   +     +     YN L++
Sbjct: 462 VKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLN 521

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G C  G L+ A  L + + +    A+VVTYN++I   C  GK++ A  L  +M  K
Sbjct: 522 GYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEK 577



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/356 (32%), Positives = 187/356 (52%), Gaps = 9/356 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLC---RTGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A  +   ++V+G  PNV TYNTLI+G C   R G    A  + +EM            P
Sbjct: 248 KAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENK------VSP 301

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N+VT+  +IDG CK+  +  A ++F +M+ + + P VVTYNSL++G C     NEAK L 
Sbjct: 302 NSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLL 361

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+   ++PNV+++N ++N  CK   ++EA  L + + + G+ PN   +NTL+ G+C  
Sbjct: 362 DEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKF 421

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++  A  L   M   G   N  +Y+ LI G+C+  ++E   +L +EM  +G+K D V Y
Sbjct: 422 GKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTY 481

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L     E  + ++A +L DEM   G+      Y   ++G C  G +  A+ L + +  
Sbjct: 482 NILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEK 541

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
                ++  YN LI G C+ G+L+ A  L   +    LI +  TY I+   +   G
Sbjct: 542 EGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKG 597



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 183/354 (51%), Gaps = 13/354 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV-CKPNTVTYTTIIDGLCKEGFV 76
           N    + L+        T++ L  F+   +   +  V+ C P       ++  L KE   
Sbjct: 159 NSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNP-------LLSALVKENEF 211

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
              + ++ +M    I+PN++T+N++I+G C     N+A  +  +M   G  PNVV++N +
Sbjct: 212 GGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTL 271

Query: 137 MNELCKN---GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++  CK    GKM +A  +L+ M++  V PN+  +N L+DGFC    ++ A ++F  M+S
Sbjct: 272 IDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQS 331

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K  V +Y+ L+NG C   ++  A  L  EMLS  +KP+V+ YN L  G  +   +E 
Sbjct: 332 QGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEE 391

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LFD + + G+  +   + T + G CK G + EA  L + +    +  +   YNCLI 
Sbjct: 392 ARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIV 451

Query: 314 GLCKSGRLKIAWELFRSLP-RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C+ G+++    L   +  RGV  AD VTYNI+I A C   +  KA  L  +M
Sbjct: 452 GFCREGKMEEVKNLLNEMQCRGVK-ADTVTYNILISAWCEKKEPKKAARLIDEM 504



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 153/286 (53%), Gaps = 6/286 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F +++  G +P V TYN+L+NGLC  G    A  L +EM + N       KPN +T
Sbjct: 322 ALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN------LKPNVIT 375

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+G CK+  +++A+ELF  +  + + PNV+T+N+L+HG+C      EA  L   M+
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G  PN  ++N ++   C+ GKM+E   LL  M   GV+ +   YN L+  +C      
Sbjct: 436 EKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPK 495

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  L   M   G K +  +Y+IL+NGYC    +  AL+L  +M  +G   +VV YN L 
Sbjct: 496 KAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLI 555

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G     ++E A  L +EM   G+  +   Y    + + + G++ +
Sbjct: 556 QGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFLPD 601



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 170/313 (54%), Gaps = 8/313 (2%)

Query: 65  TIIDGLCKEGFVDKAK-----ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +II  +    +V+ +K     E F +  D     +V++ N L+      N++   + ++ 
Sbjct: 160 SIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYK 219

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ + + PN+++FN ++N LCK GK+++A  +++ M   G  PN   YNTL+DG+C  G
Sbjct: 220 EMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMG 279

Query: 180 RVNR---AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           RV +   A+ +   M       N  ++++LI+G+CK++ +  AL ++ EM S+G+KP VV
Sbjct: 280 RVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVV 339

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN+L  GL    ++  A  L DEM    +  +   Y   I+G CK   + EA ELF  +
Sbjct: 340 TYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++  +N L+ G CK G+++ A+ L + +     + +  TYN +I   C +GKM
Sbjct: 400 GKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKM 459

Query: 357 DKARDLFLDMEAK 369
           ++ ++L  +M+ +
Sbjct: 460 EEVKNLLNEMQCR 472



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 117/234 (50%), Gaps = 22/234 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +   G  PNV T+NTL++G C+ G    A  L + M     E G +  PN  
Sbjct: 391 EARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML----EKGFL--PNAS 444

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G C+EG +++ K L  +M+   +  + VTYN LI  +C   +  +A  L  EM
Sbjct: 445 TYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEM 504

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G++P+ +++N+++N  C  G +  A  L + M + G   N   YN L+ G+C  G++
Sbjct: 505 LDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKL 564

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
             A  L   M   G   N  +Y I+       KE         EM+ KG  PD+
Sbjct: 565 EDANGLLNEMLEKGLIPNRTTYEII-------KE---------EMMEKGFLPDI 602


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 196/357 (54%), Gaps = 12/357 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVT 62
           L  ++   GC PN+ T++TLI  LCR G       LFE   E+     E G  C P+   
Sbjct: 239 LMEEMVAAGCPPNIVTFSTLIGHLCRNG-------LFERVHEVHAQMAEHG--CAPDVRM 289

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIIDG+CKE  ++ A+ +  +M    ++PNVV YN+L+ G C A+ W EA+ L  EM 
Sbjct: 290 YATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMF 349

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+    + V+FN++++ LC+NG +D    +LE M++ G  P+   Y T+++GFC  G ++
Sbjct: 350 DKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLID 409

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L  SM + GC+ N  SY+I++ G C  +    A  L S+M+ +G  P+ V +NTL 
Sbjct: 410 EAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLI 469

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +   VE+A +L  +M  +G + D  +Y T IDGL K G   EA+EL   +      
Sbjct: 470 NFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMS 529

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +   Y+ +   L   GR+    ++F ++    + +D V YN +I +LC  G+ D+A
Sbjct: 530 PNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRA 586



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 184/361 (50%), Gaps = 12/361 (3%)

Query: 10  LRVFGCEPNVFTYNTLINGLC---RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           L  FGCEP+V +YN ++ GLC   R GH     +L EEM          C PN VT++T+
Sbjct: 208 LPSFGCEPDVVSYNAVLRGLCMARRWGHV---QDLMEEMVAAG------CPPNIVTFSTL 258

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I  LC+ G  ++  E+  +M +    P+V  Y ++I G C       A+ +   M   G+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            PNVV +N ++  LC   + +EA  LL  M       +   +N L+D  C  G V+R  E
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +   M   GC  +V +Y+ +ING+CK   I+ A+ L   M + G +P+ V Y  +  GL 
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +     D+ 
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 498

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +Y+ +IDGL K+G    A EL   + +  +  + + Y+ +  AL  +G+++K   +F ++
Sbjct: 499 SYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENI 558

Query: 367 E 367
           +
Sbjct: 559 Q 559



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 105/329 (31%), Positives = 163/329 (49%), Gaps = 6/329 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++  +G  PNV  YNTL+ GLC       A  L  EM      F   C  + VT
Sbjct: 306 ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM------FDKDCPLDDVT 359

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++D LC+ G VD+  E+  +M +    P+V+TY ++I+GFC     +EA  L   M 
Sbjct: 360 FNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA 419

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PN VS+ +++  LC   +  +A  L+  MIQ G  PN   +NTL++  C  G V 
Sbjct: 420 ACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVE 479

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A EL   M   GC  ++ SYS +I+G  K    + AL L + M+ KG+ P+ +IY+++ 
Sbjct: 480 QAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIA 539

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L    ++ +  ++F+ +Q   V +D   Y   I  LCK G    A+E    +      
Sbjct: 540 SALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCV 599

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            +   Y  LI GL   G +K A E+   L
Sbjct: 600 PNESTYTILIRGLASEGFVKEAQEILTEL 628



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 160/348 (45%), Gaps = 10/348 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           YN ++ G CR G    A  L            V   PN  TY  ++  LC  G +  A  
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAS---------VPVAPNAYTYFPLVRALCARGRIADALA 132

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +   M      P    Y+  +   C A+ +  A  +  ++  +G   +V + N+++  +C
Sbjct: 133 VLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVC 192

Query: 142 KNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
             G +DEA RLL +L+   G  P+   YN ++ G C+  R    ++L   M + GC  N+
Sbjct: 193 DQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNI 252

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            ++S LI   C+N   E    ++++M   G  PDV +Y T+  G+ +  ++E A  + + 
Sbjct: 253 VTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNR 312

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M  +G++ +   Y T + GLC      EA  L   +      LD   +N L+D LC++G 
Sbjct: 313 MPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGL 372

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +    E+   +     + DV+TY  +I+  C +G +D+A  L   M A
Sbjct: 373 VDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAA 420



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 137/253 (54%), Gaps = 8/253 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK- 72
           GC P+V TY T+ING C+ G    A+ L   MA         C+PNTV+YT ++ GLC  
Sbjct: 387 GCMPDVITYTTVINGFCKEGLIDEAVMLLRSMA------ACGCRPNTVSYTIVLKGLCSA 440

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           E +VD A+EL  +M  +   PN VT+N+LI+  C      +A  L  +M+  G  P+++S
Sbjct: 441 ERWVD-AEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 499

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ +++ L K G  DEA  LL +M++ G+ PN  +Y+++       GR+N+  ++F +++
Sbjct: 500 YSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQ 559

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               + +   Y+ +I+  CK  E + A+   + M+S G  P+   Y  L  GL     V+
Sbjct: 560 DTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 619

Query: 253 RAFKLFDEMQRHG 265
            A ++  E+   G
Sbjct: 620 EAQEILTELCSKG 632



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC PN  T+NTLIN LC+ G    A+ L ++M  NG       C P+
Sbjct: 444 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 496

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  D+A EL   M  + ++PN + Y+S+          N+   +F 
Sbjct: 497 LISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFE 556

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  V+ + V +N +++ LCK G+ D A   L  M+  G  PN   Y  L+ G    G
Sbjct: 557 NIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEG 616

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 617 FVKEAQEILTELCSKGALRKHLMKHFGIV 645


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 198/360 (55%), Gaps = 6/360 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F ++   GC PNV TYNT+I+G C+   T  A      M    G  G+  +PN +T+  I
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSM----GLKGL--EPNLITFNMI 59

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I+GLC++G + +  E+ ++M  +   P+ VTYN+L++G+C   ++++A  L  EM+  G+
Sbjct: 60  INGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGL 119

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            PNVV++  ++N +CK G ++ A    + M   G+ PN   Y T+++GF   G ++ A  
Sbjct: 120 SPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYR 179

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +   M   G   ++ +Y+ LING+C    +E A+ L  +M+ KG+ PDVV Y+T+  G  
Sbjct: 180 VLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFA 239

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              +++RAF++  EM    V  D   Y + I GLC+   + EA ++F+ +  +K   D  
Sbjct: 240 RNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEF 299

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y  LI+  CK G L  A  L   + +   + D VTYN++I+ L    +  +AR L L +
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/380 (34%), Positives = 191/380 (50%), Gaps = 21/380 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA      + + G EPN+ T+N +INGLCR G       +  EM+      G V  P+ V
Sbjct: 36  EAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRK----GYV--PDEV 89

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++G CKEG   +A  L  +M    ++PNVVTY SLI+  C A + N A   F +M
Sbjct: 90  TYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQM 149

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN  ++  I+N   + G +DEA R+L  M + G  P+   YN L++G C+ GR+
Sbjct: 150 HVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRM 209

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M   G   +V SYS +I+G+ +N+E++ A  +  EM+ K + PD V Y++L
Sbjct: 210 EEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSL 269

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL E  ++  A  +F EM    +  D + Y T I+  CK G + +A+ L   +    +
Sbjct: 270 IQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGF 329

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH------------- 348
             D   YN LI+GL K  R K A  L   L     I   VTYN +I              
Sbjct: 330 LPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVAL 389

Query: 349 --ALCADGKMDKARDLFLDM 366
               C  G MD+A  +F  M
Sbjct: 390 VKGFCMKGLMDEADQVFESM 409



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 167/333 (50%), Gaps = 6/333 (1%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           + L  F+EM   NG     C PN VTY T+IDG CK    D+A      M  + + PN++
Sbjct: 1   MGLRFFKEMER-NG-----CLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLI 54

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           T+N +I+G C      E   + +EM  +G  P+ V++N ++N  CK G   +A  L   M
Sbjct: 55  TFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEM 114

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           ++ G+ PN   Y +L++  C  G +NRA E F  M   G   N  +Y+ +ING+ +   +
Sbjct: 115 VRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLL 174

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A  + +EM   G  P +V YN L  G   + ++E A  L  +M   GV  D  +Y T 
Sbjct: 175 DEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I G  +N  +  A ++   +       D   Y+ LI GLC+  RL  A ++F+ +    L
Sbjct: 235 ISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKL 294

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             D  TY  +I+A C +G ++KA  L  +M  K
Sbjct: 295 PPDEFTYTTLINAYCKEGDLNKALHLHDEMIQK 327



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 176/388 (45%), Gaps = 61/388 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV TY +LIN +C+ G+   A+  F++M         +C PN  
Sbjct: 106 QALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQM-----HVRGLC-PNER 159

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTTII+G  ++G +D+A  +  +M      P++VTYN+LI+G C      EA  L  +M
Sbjct: 160 TYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDM 219

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD---------------------------------- 147
           + +GV P+VVS++ I++   +N ++D                                  
Sbjct: 220 VGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRL 279

Query: 148 -EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA  + + M+ I + P+ F Y TL++ +C  G +N+A  L   M   G   +  +Y++L
Sbjct: 280 TEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVL 339

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING  K    + A  L  ++      P  V YNTL      I      FK          
Sbjct: 340 INGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIE-----FK---------- 384

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                +    + G C  G + EA ++F ++    ++ +   YN +I G C+ G +  A++
Sbjct: 385 -----SAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYK 439

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADG 354
           L++ +     +   VT   ++ AL  +G
Sbjct: 440 LYKEMVHVDFVPHTVTVLALVKALFTEG 467


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/355 (35%), Positives = 196/355 (55%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +NTLIN   R G    +L +FE+M       GV   P+ +T++T+I   C+ 
Sbjct: 394 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ----GV--NPDIITFSTVISAFCRL 447

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F  M D  + P+   Y+ LI G C   D  +AK L  +M+ +G+ P  + F
Sbjct: 448 GRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKF 507

Query: 134 -NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
              I+N LCK G++ E   +++L+I  G RPN   +N+L+DG+CL G +  A  L  SME
Sbjct: 508 FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 567

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G + ++++Y+ L++GYCK+  I+ AL+L+ +ML K +    V YN +  GLF+  +  
Sbjct: 568 SVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 627

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F EM   G+A     Y T + GLC+N    EA  L   L  +  + DI  +N +I
Sbjct: 628 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVI 687

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             + K GR + A ELF ++    L+  ++TY +MI  L  +   + A +LF  ME
Sbjct: 688 RAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 742



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 192/365 (52%), Gaps = 12/365 (3%)

Query: 3   AAALFMKLRVFGCE---PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKP 58
           A  LF ++    C    P ++TYN LIN   R     + L +F  +   G G       P
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG-------P 222

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  +Y  +IDG  KEG VDKA +LF KM+++ I PNVVTY+SLI+G C   + ++A+ + 
Sbjct: 223 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 282

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  GV+PN +++N +++    +G   E+ R+ + M    + P+    N+ M   C  
Sbjct: 283 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 342

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GR+  A ++F SM   G K +V SY  L++GY     I G  +L++ M+ +G+ PD  ++
Sbjct: 343 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 402

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL      +  ++++  +F++M + GV  D   + T I   C+ G + +A+E F  +  
Sbjct: 403 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 462

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMD 357
                D   Y+CLI G C    L  A EL    L +G+    +  +  +I+ LC +G++ 
Sbjct: 463 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 522

Query: 358 KARDL 362
           + +D+
Sbjct: 523 EGKDV 527



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 192/401 (47%), Gaps = 42/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G  PNV TY++LINGLC+T     A  +  +M       G   +PN +
Sbjct: 242 KAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV------GAGVRPNNM 295

Query: 62  TYTTIIDG-----------------------------------LCKEGFVDKAKELFLKM 86
           TY  +I G                                   LCK G + +A+++F  M
Sbjct: 296 TYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 355

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
             +   P+V++Y +L+HG+  A        LF  M+ +GV P+   FN ++N   + G M
Sbjct: 356 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 415

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D++  + E M + GV P+   ++T++  FC  GR++ A E F  M   G   +   YS L
Sbjct: 416 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 475

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI-GLFEIHQVERAFKLFDEMQRHG 265
           I G C  +++  A  L S+MLSKGI P  + + T  I  L +  +V     + D +   G
Sbjct: 476 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 535

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +   + + +DG C  G + EAV L  ++  +  E DI  YN L+DG CK GR+  A 
Sbjct: 536 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 595

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LFR +    +    V+YNI++H L    +   A+++F +M
Sbjct: 596 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 636



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 164/342 (47%), Gaps = 5/342 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   Y+ LI G C     + A  L  +M +       +  P    +T+II+ LCKE
Sbjct: 464 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCKE 518

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V + K++   +      PN++T+NSL+ G+C   +  EA  L   M   GV+P++ ++
Sbjct: 519 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 578

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK+G++D+A  L   M+   V   +  YN ++ G     R   A+E+F  M  
Sbjct: 579 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 638

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ +Y+ ++ G C+N   + A  L  ++ S  +K D++ +N +   +F++ + + 
Sbjct: 639 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 698

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LF  +  +G+      YR  I  L K     +A  LF ++       D R  N +I 
Sbjct: 699 AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIR 758

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
            L   G +  A      + +  ++ +  T +++I+    +GK
Sbjct: 759 MLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 800



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 10/288 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+ T+N+L++G C  G+   A+ L + M +      V  +P+  TY T++DG CK 
Sbjct: 535 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES------VGVEPDIYTYNTLVDGYCKH 588

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A  LF  M  + +    V+YN ++HG   A     AK +F EM++ G+  ++ ++
Sbjct: 589 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 648

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++  LC+N   DEA+ LLE +  + V+ +   +N ++      GR   A+ELF ++ +
Sbjct: 649 ATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIST 708

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    + +Y ++I    K +  E A +L+S M      PD  I N +   L    +V +
Sbjct: 709 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAK 768

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG----YIVEAVELFRTLR 297
           A     ++ + G+  +       I     NG    YI    E +R LR
Sbjct: 769 AGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 816



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G EP+++TYNTL++G C+ G    AL LF +M +            +V
Sbjct: 558 EAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTL------TSV 611

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  I+ GL +      AKE+F +M +  +  ++ TY +++ G C  N  +EA  L  ++
Sbjct: 612 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 671

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+ ++++FN+++  + K G+  EA  L   +   G+ P    Y  ++         
Sbjct: 672 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 731

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ LF SME   C  +    + +I       E+  A +  S++  KGI P+     +L
Sbjct: 732 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATT-TSL 790

Query: 242 FIGLFEIHQVERAF-KLFDEMQR 263
            I LF ++   R + KL  E  R
Sbjct: 791 LIYLFSVNGKYREYIKLLPEKYR 813


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 209/377 (55%), Gaps = 22/377 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++    C+PNV T+ TL+NGLCR G  + A+ L + M     E G+  +PN +
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMV----EDGL--QPNQI 117

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKD-ENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY TI+DG+CK G    A  L  KM++  +I P+VV Y+++I G        +A+ LFIE
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G+ P++V+++ ++N  C +GK  EA RLL+ M+   + P+   ++ L++     G 
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----------- 229
           +N A++L   M S G   NV + + L++G C + +++ AL ++  M              
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G++PDV  YN L  GL    +   A +L++EM   G+  DT  Y + I+GLCK   + EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            ++F ++    +  +I  +N LI G CK+G +    ELF  + R  ++A+ +TY  +I  
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 350 LCADGKMDKARDLFLDM 366
               G ++ + D+F +M
Sbjct: 418 FRKVGNINGSLDIFQEM 434



 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/378 (33%), Positives = 213/378 (56%), Gaps = 16/378 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +PN  TY T+++G+C+ G T+ ALNL  +M     E   + KP+ 
Sbjct: 98  VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME----ELSHI-KPDV 152

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IIDGL K+G    A+ LF++M+D+ I P++VTY+ +I+GFC +  W+EA+ L  E
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P+VV+F+ ++N L K G ++ A  LL+ MI  GV PN    NTL+DG C +G+
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 181 VNRAEELFVSME-SM----------GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           +  A E+F +M+ SM          G + +V +Y+ILI+G     +   A  LY EM  +
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           GI PD V Y+++  GL +  +++ A ++FD M     + +   + T I G CK G + + 
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           +ELF  +       +   Y  LI G  K G +  + ++F+ +    +  D +T   M+  
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTG 452

Query: 350 LCADGKMDKARDLFLDME 367
           L +  ++ KA  +  +++
Sbjct: 453 LWSKEELKKALAMLEELQ 470



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 191/364 (52%), Gaps = 22/364 (6%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +++++N LI   C       AL+ F ++     + G    P  VT+ T++ GLC E  V 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLT----KLGF--HPTLVTFNTLLHGLCVEDRVS 67

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A +LF +M      PNVVT+ +L++G C      EA  L   M++ G+QPN +++  I+
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 138 NELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           + +CK G    A  LL  M ++  ++P+  +Y+ ++DG    GR   A+ LF+ M+  G 
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +YS +ING+C + +   A  L  EML + I PDVV ++ L   L +   +  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-----------ILKYELDI 305
           L  EM   GV  +     T +DGLC +G + +A+E+F+ ++               E D+
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           + YN LI GL   G+   A EL+  +P   ++ D VTY+ MI+ LC   ++D+A  +F  
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 366 MEAK 369
           M +K
Sbjct: 364 MGSK 367


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/377 (33%), Positives = 209/377 (55%), Gaps = 22/377 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++    C+PNV T+ TL+NGLCR G  + A+ L + M     E G+  +PN +
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMV----EDGL--QPNQI 117

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKD-ENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY TI+DG+CK G    A  L  KM++  +I P+VV Y+++I G        +A+ LFIE
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G+ P++V+++ ++N  C +GK  EA RLL+ M+   + P+   ++ L++     G 
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK----------- 229
           +N A++L   M S G   NV + + L++G C + +++ AL ++  M              
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G++PDV  YN L  GL    +   A +L++EM   G+  DT  Y + I+GLCK   + EA
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            ++F ++    +  +I  +N LI G CK+G +    ELF  + R  ++A+ +TY  +I  
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 350 LCADGKMDKARDLFLDM 366
               G ++ + D+F +M
Sbjct: 418 FRKVGNINGSLDIFQEM 434



 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/378 (33%), Positives = 213/378 (56%), Gaps = 16/378 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL  ++   G +PN  TY T+++G+C+ G T+ ALNL  +M     E   + KP+ 
Sbjct: 98  VEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKME----ELSHI-KPDV 152

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ IIDGL K+G    A+ LF++M+D+ I P++VTY+ +I+GFC +  W+EA+ L  E
Sbjct: 153 VIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQE 212

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P+VV+F+ ++N L K G ++ A  LL+ MI  GV PN    NTL+DG C +G+
Sbjct: 213 MLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272

Query: 181 VNRAEELFVSME-SM----------GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           +  A E+F +M+ SM          G + +V +Y+ILI+G     +   A  LY EM  +
Sbjct: 273 LKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR 332

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           GI PD V Y+++  GL +  +++ A ++FD M     + +   + T I G CK G + + 
Sbjct: 333 GIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDG 392

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           +ELF  +       +   Y  LI G  K G +  + ++F+ +    +  D +T   M+  
Sbjct: 393 LELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTG 452

Query: 350 LCADGKMDKARDLFLDME 367
           L +  ++ +A  +  +++
Sbjct: 453 LWSKEELKRALAMLEELQ 470



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 191/364 (52%), Gaps = 22/364 (6%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +++++N LI   C       AL+ F ++     + G    P  VT+ T++ GLC E  V 
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLT----KLGF--HPTLVTFNTLLHGLCVEDRVS 67

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A +LF +M      PNVVT+ +L++G C      EA  L   M++ G+QPN +++  I+
Sbjct: 68  EALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIV 123

Query: 138 NELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           + +CK G    A  LL  M ++  ++P+  +Y+ ++DG    GR   A+ LF+ M+  G 
Sbjct: 124 DGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGI 183

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +YS +ING+C + +   A  L  EML + I PDVV ++ L   L +   +  A  
Sbjct: 184 FPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQD 243

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-----------ILKYELDI 305
           L  EM   GV  +     T +DGLC +G + +A+E+F+ ++               E D+
Sbjct: 244 LLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDV 303

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           + YN LI GL   G+   A EL+  +P   ++ D VTY+ MI+ LC   ++D+A  +F  
Sbjct: 304 QTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDS 363

Query: 366 MEAK 369
           M +K
Sbjct: 364 MGSK 367


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/355 (35%), Positives = 196/355 (55%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +NTLIN   R G    +L +FE+M       GV   P+ +T++T+I   C+ 
Sbjct: 323 GVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ----GV--NPDIITFSTVISAFCRL 376

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F  M D  + P+   Y+ LI G C   D  +AK L  +M+ +G+ P  + F
Sbjct: 377 GRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKF 436

Query: 134 -NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
              I+N LCK G++ E   +++L+I  G RPN   +N+L+DG+CL G +  A  L  SME
Sbjct: 437 FTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSME 496

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S+G + ++++Y+ L++GYCK+  I+ AL+L+ +ML K +    V YN +  GLF+  +  
Sbjct: 497 SVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTI 556

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F EM   G+A     Y T + GLC+N    EA  L   L  +  + DI  +N +I
Sbjct: 557 VAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVI 616

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             + K GR + A ELF ++    L+  ++TY +MI  L  +   + A +LF  ME
Sbjct: 617 RAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 671



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 192/365 (52%), Gaps = 12/365 (3%)

Query: 3   AAALFMKLRVFGCE---PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKP 58
           A  LF ++    C    P ++TYN LIN   R     + L +F  +   G G       P
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG-------P 151

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  +Y  +IDG  KEG VDKA +LF KM+++ I PNVVTY+SLI+G C   + ++A+ + 
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 211

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  GV+PN +++N +++    +G   E+ R+ + M    + P+    N+ M   C  
Sbjct: 212 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 271

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GR+  A ++F SM   G K +V SY  L++GY     I G  +L++ M+ +G+ PD  ++
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL      +  ++++  +F++M + GV  D   + T I   C+ G + +A+E F  +  
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMD 357
                D   Y+CLI G C    L  A EL    L +G+    +  +  +I+ LC +G++ 
Sbjct: 392 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 451

Query: 358 KARDL 362
           + +D+
Sbjct: 452 EGKDV 456



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 192/401 (47%), Gaps = 42/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G  PNV TY++LINGLC+T     A  +  +M       G   +PN +
Sbjct: 171 KAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMV------GAGVRPNNM 224

Query: 62  TYTTIIDG-----------------------------------LCKEGFVDKAKELFLKM 86
           TY  +I G                                   LCK G + +A+++F  M
Sbjct: 225 TYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSM 284

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
             +   P+V++Y +L+HG+  A        LF  M+ +GV P+   FN ++N   + G M
Sbjct: 285 VLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMM 344

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D++  + E M + GV P+   ++T++  FC  GR++ A E F  M   G   +   YS L
Sbjct: 345 DKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCL 404

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI-GLFEIHQVERAFKLFDEMQRHG 265
           I G C  +++  A  L S+MLSKGI P  + + T  I  L +  +V     + D +   G
Sbjct: 405 IQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTG 464

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +   + + +DG C  G + EAV L  ++  +  E DI  YN L+DG CK GR+  A 
Sbjct: 465 QRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDAL 524

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LFR +    +    V+YNI++H L    +   A+++F +M
Sbjct: 525 TLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEM 565



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 164/342 (47%), Gaps = 5/342 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   Y+ LI G C     + A  L  +M +       +  P    +T+II+ LCKE
Sbjct: 393 GVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCKE 447

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V + K++   +      PN++T+NSL+ G+C   +  EA  L   M   GV+P++ ++
Sbjct: 448 GRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTY 507

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK+G++D+A  L   M+   V   +  YN ++ G     R   A+E+F  M  
Sbjct: 508 NTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIE 567

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ +Y+ ++ G C+N   + A  L  ++ S  +K D++ +N +   +F++ + + 
Sbjct: 568 SGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQE 627

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LF  +  +G+      YR  I  L K     +A  LF ++       D R  N +I 
Sbjct: 628 AKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIR 687

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
            L   G +  A      + +  ++ +  T +++I+    +GK
Sbjct: 688 MLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLFSVNGK 729



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 10/288 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+ T+N+L++G C  G+   A+ L + M +      V  +P+  TY T++DG CK 
Sbjct: 464 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES------VGVEPDIYTYNTLVDGYCKH 517

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A  LF  M  + +    V+YN ++HG   A     AK +F EM++ G+  ++ ++
Sbjct: 518 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTY 577

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++  LC+N   DEA+ LLE +  + V+ +   +N ++      GR   A+ELF ++ +
Sbjct: 578 ATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAIST 637

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    + +Y ++I    K +  E A +L+S M      PD  I N +   L    +V +
Sbjct: 638 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAK 697

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG----YIVEAVELFRTLR 297
           A     ++ + G+  +       I     NG    YI    E +R LR
Sbjct: 698 AGNYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 745



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 124/263 (47%), Gaps = 8/263 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G EP+++TYNTL++G C+ G    AL LF +M +            +V
Sbjct: 487 EAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTL------TSV 540

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  I+ GL +      AKE+F +M +  +  ++ TY +++ G C  N  +EA  L  ++
Sbjct: 541 SYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKL 600

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V+ ++++FN+++  + K G+  EA  L   +   G+ P    Y  ++         
Sbjct: 601 FSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESF 660

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ LF SME   C  +    + +I       E+  A +  S++  KGI P+     +L
Sbjct: 661 EDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATT-TSL 719

Query: 242 FIGLFEIHQVERAF-KLFDEMQR 263
            I LF ++   R + KL  E  R
Sbjct: 720 LIYLFSVNGKYREYIKLLPEKYR 742


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/359 (35%), Positives = 186/359 (51%), Gaps = 7/359 (1%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M+ R  GC PN  T+N +I GL R G    A  + E M        +  K ++ TY  +I
Sbjct: 263 METRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-------LSKKASSFTYNPLI 315

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GL  +GFV KA +L L+M++E I P VVTYN++IHG   +     A+  F+EM   G+Q
Sbjct: 316 TGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQ 375

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+V+++N ++N  CK G + EA  L   +   G+ P    YN L+DG+C  G +  A  L
Sbjct: 376 PDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRL 435

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M   GC  +V +Y+IL+ G      +  A   + EMLSKG++PD   YNT       
Sbjct: 436 KEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELT 495

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           +  + +AF+L + M   G+++DT  Y   IDGLCK G + +A +L   +     + D   
Sbjct: 496 LGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCIT 555

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y CLI   C+ G L+ A + F+ +    L    VTY + IHA C  G +  A   F  M
Sbjct: 556 YTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKM 614



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L +++   G  P V TYN +I+GL ++G    A   F EM        +  +P+ +
Sbjct: 326 KADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR------AMGLQPDVI 379

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++++G CK G + +A  LF  ++   + P V+TYN LI G+C   D  EA+ L  EM
Sbjct: 380 TYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEM 439

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG  P+V ++ ++M        +  A    + M+  G++P+ F YNT +      G +
Sbjct: 440 VEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAI 499

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  L   M   G   +  +Y+ILI+G CK   +  A  L  +M+  G++PD + Y  L
Sbjct: 500 AKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCL 559

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E   +  A K F +M   G+A     Y  FI   C+ G +  A   FR +     
Sbjct: 560 IHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGV 619

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E +   YN LI  LC++GR ++A+  F  +    L+ +  TY ++I   C +G  + A  
Sbjct: 620 EPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMR 679

Query: 362 LFLDME 367
            + +M 
Sbjct: 680 FYFEMH 685



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 176/360 (48%), Gaps = 8/360 (2%)

Query: 1   MEAAAL-FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +EAA + F+++R  G +P+V TYN+L+NG C+ G    AL LF ++ +          P 
Sbjct: 359 VEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAG------LAPT 412

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TY  +IDG C+ G +++A+ L  +M ++   P+V TY  L+ G   A     A+  F 
Sbjct: 413 VLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFD 472

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +G+QP+  ++N  +      G + +A RL E+M+  G+  +   YN L+DG C TG
Sbjct: 473 EMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTG 532

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +N A++L + M   G + +  +Y+ LI+ +C+   +  A   + +M+S G+ P  V Y 
Sbjct: 533 NLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYT 592

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                      +  A+  F +M   GV  +   Y   I  LC+ G    A   F  +   
Sbjct: 593 VFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLER 652

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +   Y  LIDG CK G  + A   +  + +  +  D +T+  +      +G M+ A
Sbjct: 653 GLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF-DEGHMNHA 711



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/289 (30%), Positives = 143/289 (49%), Gaps = 3/289 (1%)

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           F +M    + P+V   N ++     A  W++   +  EM+  G++P++V++N +++   K
Sbjct: 190 FHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLK 249

Query: 143 NGKMDEASRLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            G+ D+ + LL+ M     G  PN   +N ++ G    G +  A E+   M  +  K + 
Sbjct: 250 EGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMR-LSKKASS 308

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           F+Y+ LI G      ++ A  L  EM ++GI P VV YN +  GL +  QVE A   F E
Sbjct: 309 FTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVE 368

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G+  D   Y + ++G CK G + EA+ LF  LR       +  YN LIDG C+ G 
Sbjct: 369 MRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGD 428

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+ A  L   +     + DV TY I++        +  AR+ F +M +K
Sbjct: 429 LEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSK 477



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 144/325 (44%), Gaps = 42/325 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  LR  G  P V TYN LI+G CR G    A  L EEM          C P+  
Sbjct: 396 EALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQG------CLPDVC 449

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPN--------------------------- 94
           TYT ++ G      +  A+E F +M  + + P+                           
Sbjct: 450 TYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVM 509

Query: 95  --------VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                    VTYN LI G C   + N+AK L ++M+  G+QP+ +++  +++  C+ G +
Sbjct: 510 MLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLL 569

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA +  + MI  G+ P+A  Y   +  +C  G +  A   F  M   G + N  +Y++L
Sbjct: 570 REARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 629

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+  C+    + A   + EML +G+ P+   Y  L  G  +    E A + + EM ++G+
Sbjct: 630 IHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGI 689

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVE 291
             D   ++    G    G++  A+E
Sbjct: 690 HPDYLTHKALFKGF-DEGHMNHAIE 713



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 38/186 (20%)

Query: 220 LSLYSEMLSKGIKPDV-----------------------------------VIYNTLFIG 244
           LS + EM S G+ PDV                                   V YNTL   
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 245 LFEIHQVERAFKLFDEMQRHGVA--ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             +  + ++   L  EM+  G     +   +   I GL + G + EA E+   +R+ K  
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKA 306

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                YN LI GL   G +K A +L   +    ++  VVTYN MIH L   G+++ A+  
Sbjct: 307 SSF-TYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVK 365

Query: 363 FLDMEA 368
           F++M A
Sbjct: 366 FVEMRA 371


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 199/365 (54%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++   +R  GC+PN  TYNTL+   CR G    A  L + M  G        KPN V
Sbjct: 175 EALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG------LKPNLV 228

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++++G+CK G ++ A+++F +M  E + P+ V+YN+L+ G+C     +EA  +F EM
Sbjct: 229 TFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEM 288

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VV+F  +++ +CK G ++ A  L+  M + G++ N   +  L+DGFC  G +
Sbjct: 289 TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFL 348

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M     + +V  Y+ LINGYC    ++ A  L  EM +KG+KPDVV Y+T+
Sbjct: 349 DDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTI 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +      AF+L  +M  +GV  D   Y + I  LC+   + +A  LF+ +  L  
Sbjct: 409 LSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGL 468

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   Y  LIDG CK G ++ A  L   + +  ++ DVVTY+++I+ L    +  +A+ 
Sbjct: 469 QPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQR 528

Query: 362 LFLDM 366
           L   +
Sbjct: 529 LLFKL 533



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 164/309 (53%), Gaps = 1/309 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ + Y  ++  L  +  +  A+  F  M  + + PNV TYN L+   C      EA  +
Sbjct: 121 PSVLAYNAVLLAL-SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M   G  PN V++N ++   C+ G++D A RL+++M + G++PN   +N++++G C 
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR+  A ++F  M   G   +  SY+ L+ GYCK      ALS+++EM  KGI PDVV 
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           + +L   + +   +ERA  L  EM+  G+  +   +   IDG CK G++ +A+   R +R
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             + +  +  YN LI+G C  GR+  A EL R +    +  DVVTY+ ++ A C +G   
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTH 419

Query: 358 KARDLFLDM 366
            A  L   M
Sbjct: 420 SAFQLNQQM 428



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 150/277 (54%), Gaps = 1/277 (0%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+V+ YN+++     A+    A+  F  M+  GV PNV ++N+++  LC  G   EA  +
Sbjct: 121 PSVLAYNAVLLALSDAS-LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSV 179

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M   G  PNA  YNTL+  FC  G V+RAE L   M   G K N+ +++ ++NG CK
Sbjct: 180 LRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICK 239

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  ++ EM+ +G+ PD V YNTL  G  ++     A  +F EM R G+  D   
Sbjct: 240 AGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT 299

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + + I  +CK G +  AV L R +R    +++   +  LIDG CK G L  A    R + 
Sbjct: 300 FTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMR 359

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  +   VV YN +I+  C  G+MD+AR+L  +MEAK
Sbjct: 360 QCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAK 396



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 181/353 (51%), Gaps = 7/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V  YN ++  L        A   F+ M +     GV   PN  TY  ++  LC  
Sbjct: 118 GYAPSVLAYNAVLLAL-SDASLPSARRFFDSMLSD----GVA--PNVYTYNILVRALCGR 170

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  +   M+    +PN VTYN+L+  FC A + + A+ L   M + G++PN+V+F
Sbjct: 171 GHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTF 230

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N +CK G+M++A ++ + M++ G+ P+   YNTL+ G+C  G  + A  +F  M  
Sbjct: 231 NSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTR 290

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V +++ LI+  CK   +E A+ L  EM  +G++ + + +  L  G  +   ++ 
Sbjct: 291 KGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDD 350

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A     EM++  +      Y   I+G C  G + EA EL R +     + D+  Y+ ++ 
Sbjct: 351 ALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILS 410

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             CK+G    A++L + +    ++ D +TY+ +I  LC + ++  A  LF +M
Sbjct: 411 AYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNM 463



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 172/365 (47%), Gaps = 61/365 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F ++   G  P+V T+ +LI+ +C+ G+   A+ L  EM     E G+  + N +
Sbjct: 280 EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMR----ERGL--QMNEI 333

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDG CK+GF+D A     +M+   I P+VV YN+LI+G+C     +EA+ L  EM
Sbjct: 334 TFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREM 393

Query: 122 MDQGVQPNVVSFNVIMNELCKNG-----------------------------------KM 146
             +GV+P+VV+++ I++  CKNG                                   ++
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +A  L + MI +G++P+   Y +L+DG C  G V RA  L   M   G   +V +YS+L
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVL 513

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING  K+   + A                     L   L+    V    K +D + R   
Sbjct: 514 INGLSKSARTKEA-------------------QRLLFKLYHEEPVPANIK-YDALMRCCR 553

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
            A+  +    + G C  G + EA ++++++    + LD   Y+ LI G C+ G +  A  
Sbjct: 554 NAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALS 613

Query: 327 LFRSL 331
             + +
Sbjct: 614 FHKQM 618



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 150/300 (50%), Gaps = 21/300 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +P+V TY+T+++  C+ G T  A  L ++M     E GV+  P+ +
Sbjct: 385 EARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML----ENGVL--PDAI 438

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I  LC+E  +  A  LF  M    + P+ VTY SLI G C   +   A  L  EM
Sbjct: 439 TYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEM 498

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM--------- 172
           +  GV P+VV+++V++N L K+ +  EA RLL  +      P    Y+ LM         
Sbjct: 499 VKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELK 558

Query: 173 ------DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GFC+ G +N A++++ S+       +   YS+LI+G+C+   +  ALS + +M
Sbjct: 559 SVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQM 618

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L  G  P+     +L  GLFE   V  A ++  ++      AD  A +  ID   K G +
Sbjct: 619 LQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNV 678


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 203/368 (55%), Gaps = 11/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  +    C P++ T+N L++ L ++G    A  +FE M   +      C PN V
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ-----CLPNVV 137

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+GLCK+G +D+A EL   M +    PNV+TY+ L+ G C A   ++   L  EM
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G QP+V+ +N ++N LCK+ ++DEA  L++LMI+ G  P    YN+LM+ FC + +V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  L   M   GC  +V +Y+ +I G C++  ++ A +L  +M++    PDV+ Y+T+
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 242 FIGLFEIHQVERAFKL------FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             GL +  +V+  +KL       + M++ G   +   Y   I+GLC+     +A+ L R 
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +   +   D+ +++ +I  LCKS  L  A+++F  +       + V Y  +I  L   G+
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 356 MDKARDLF 363
           +DKA  +F
Sbjct: 438 VDKAVRVF 445



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 191/362 (52%), Gaps = 13/362 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNV TY+ L+ GLC+ G T     L +EM     +      P+ + Y T+++GLCK 
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIMYNTLLNGLCKS 219

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A EL   M      P VVTYNSL+  FC +   + A  L   M ++G  P+V+++
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR------AEEL 187
           N ++  LC++ ++D+A  LL+ M+     P+   Y+T++DG C   RV+       A E+
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M+  GC  N  +Y+++I G C+ ++ + AL+L   M+   + PD+  ++ +   L +
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
            H ++ A+K+F  M       +  AY   IDGL K G + +AV +F  L +  +   +  
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVAT 458

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN ++DGLC  GR++ A  +   +       D  +Y  +I  LC    +++A +LF  +E
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVE 518

Query: 368 AK 369
           AK
Sbjct: 519 AK 520



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 176/336 (52%), Gaps = 10/336 (2%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N  +N L R G    A+ LF E           C PN  TY ++I GLCK G +D+A EL
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---------CVPNEFTYGSLIHGLCKAGKLDQAYEL 52

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
             +M+D  I P V  +N +I G C A  + +A   F  +      P++++FN++++ L K
Sbjct: 53  LDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVK 112

Query: 143 NGKMDEASRLLELM-IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           +G+++EA ++ E M       PN   Y T+++G C  G+++RA EL   M   GC  NV 
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +YS+L+ G CK    +   +L  EM  +G +PDV++YNTL  GL +  +++ A +L   M
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            R G       Y + ++  C++  +  A  L + +       D+  YN +I GLC+  RL
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             A  L + +     + DV+TY+ +I  LC D ++D
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 171/331 (51%), Gaps = 17/331 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC P V TYN+L+   CR+     A  L + M+    E G  C P+ +
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS----ERG--CPPDVI 277

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN-------EA 114
            Y T+I GLC++  +D A+ L  +M      P+V+TY+++I G C   DW        EA
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC--KDWRVDADWKLEA 335

Query: 115 KCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
            C  +EMM Q G  PN  ++ V++  LC+  K  +A  LL  MI   V P+   ++ ++ 
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C +  ++ A ++F  M    CK N  +Y+ LI+G  K  E++ A+ ++ E++ +  +P
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRP 454

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            V  YN++  GL  + ++E A ++ + M       D  +Y   I GLC+   + EA ELF
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           + +    + +++  YN L++ LCK  RL  A
Sbjct: 515 QAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 123/233 (52%), Gaps = 8/233 (3%)

Query: 1   MEAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +EAA   +++ +  GC PN  TY  +I GLCR   +  AL L   M +      VV  P+
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE----VV--PD 386

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             +++ +I  LCK   +D A ++F  M +    PN V Y +LI G     + ++A  +F 
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF- 445

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+M +  +P V ++N +++ LC  G+++EA R++E MI     P+   Y  L+ G C   
Sbjct: 446 ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            V  A ELF ++E+ G    V  Y++L+N  CK K +  A  + ++++  G K
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 4/193 (2%)

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+  +A +LF       C  N F+Y  LI+G CK  +++ A  L  EM  +GI P V +
Sbjct: 11  AGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAV 67

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N +  GL +  +   A   F  +       D   +   +D L K+G + EA ++F ++ 
Sbjct: 68  HNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127

Query: 298 ILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                L ++  Y  +I+GLCK G+L  A EL   +       +V+TY++++  LC  G+ 
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187

Query: 357 DKARDLFLDMEAK 369
           DK   L  +M  +
Sbjct: 188 DKGFTLLQEMTRR 200


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 203/368 (55%), Gaps = 11/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  +    C P++ T+N L++ L ++G    A  +FE M   +      C PN V
Sbjct: 83  DALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQ-----CLPNVV 137

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+GLCK+G +D+A EL   M +    PNV+TY+ L+ G C A   ++   L  EM
Sbjct: 138 TYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEM 197

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G QP+V+ +N ++N LCK+ ++DEA  L++LMI+ G  P    YN+LM+ FC + +V
Sbjct: 198 TRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV 257

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  L   M   GC  +V +Y+ +I G C++  ++ A +L  +M++    PDV+ Y+T+
Sbjct: 258 DRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTI 317

Query: 242 FIGLFEIHQVERAFKL------FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             GL +  +V+  +KL       + M++ G   +   Y   I+GLC+     +A+ L R 
Sbjct: 318 IDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRR 377

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +   +   D+ +++ +I  LCKS  L  A+++F  +       + V Y  +I  L   G+
Sbjct: 378 MIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGE 437

Query: 356 MDKARDLF 363
           +DKA  +F
Sbjct: 438 VDKAVRVF 445



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 191/362 (52%), Gaps = 13/362 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNV TY+ L+ GLC+ G T     L +EM     +      P+ + Y T+++GLCK 
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQ------PDVIMYNTLLNGLCKS 219

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A EL   M      P VVTYNSL+  FC +   + A  L   M ++G  P+V+++
Sbjct: 220 RRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINY 279

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR------AEEL 187
           N ++  LC++ ++D+A  LL+ M+     P+   Y+T++DG C   RV+       A E+
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEI 339

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M+  GC  N  +Y+++I G C+ ++ + AL+L   M+   + PD+  ++ +   L +
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
            H ++ A+K+F  M       +  AY   IDGL K G + +AV +F  L +  +   +  
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFE-LMVESFRPGVAT 458

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN ++DGLC  GR++ A  +   +       D  +Y  +I  LC    +++A +LF  +E
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVE 518

Query: 368 AK 369
           AK
Sbjct: 519 AK 520



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 176/336 (52%), Gaps = 10/336 (2%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N  +N L R G    A+ LF E           C PN  TY ++I GLCK G +D+A EL
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---------CVPNEFTYGSLIHGLCKAGKLDQAYEL 52

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
             +M+D  I P V  +N +I G C A  + +A   F  +      P++++FN++++ L K
Sbjct: 53  LDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVK 112

Query: 143 NGKMDEASRLLELM-IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           +G+++EA ++ E M       PN   Y T+++G C  G+++RA EL   M   GC  NV 
Sbjct: 113 SGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVI 172

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +YS+L+ G CK    +   +L  EM  +G +PDV++YNTL  GL +  +++ A +L   M
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            R G       Y + ++  C++  +  A  L + +       D+  YN +I GLC+  RL
Sbjct: 233 IRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARL 292

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             A  L + +     + DV+TY+ +I  LC D ++D
Sbjct: 293 DDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 171/331 (51%), Gaps = 17/331 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC P V TYN+L+   CR+     A  L + M+    E G  C P+ +
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS----ERG--CPPDVI 277

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN-------EA 114
            Y T+I GLC++  +D A+ L  +M      P+V+TY+++I G C   DW        EA
Sbjct: 278 NYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC--KDWRVDADWKLEA 335

Query: 115 KCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
            C  +EMM Q G  PN  ++ V++  LC+  K  +A  LL  MI   V P+   ++ ++ 
Sbjct: 336 ACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIG 395

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C +  ++ A ++F  M    CK N  +Y+ LI+G  K  E++ A+ ++ E++ +  +P
Sbjct: 396 SLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRP 454

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            V  YN++  GL  + ++E A ++ + M       D  +Y   I GLC+   + EA ELF
Sbjct: 455 GVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELF 514

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           + +    + +++  YN L++ LCK  RL  A
Sbjct: 515 QAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 123/233 (52%), Gaps = 8/233 (3%)

Query: 1   MEAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +EAA   +++ +  GC PN  TY  +I GLCR   +  AL L   M +      VV  P+
Sbjct: 333 LEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE----VV--PD 386

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             +++ +I  LCK   +D A ++F  M +    PN V Y +LI G     + ++A  +F 
Sbjct: 387 LSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVF- 445

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+M +  +P V ++N +++ LC  G+++EA R++E MI     P+   Y  L+ G C   
Sbjct: 446 ELMVESFRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVS 505

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            V  A ELF ++E+ G    V  Y++L+N  CK K +  A  + ++++  G K
Sbjct: 506 CVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYK 558



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 56/193 (29%), Positives = 94/193 (48%), Gaps = 4/193 (2%)

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+  +A +LF       C  N F+Y  LI+G CK  +++ A  L  EM  +GI P V +
Sbjct: 11  AGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAV 67

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N +  GL +  +   A   F  +       D   +   +D L K+G + EA ++F ++ 
Sbjct: 68  HNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMH 127

Query: 298 ILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                L ++  Y  +I+GLCK G+L  A EL   +       +V+TY++++  LC  G+ 
Sbjct: 128 TSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRT 187

Query: 357 DKARDLFLDMEAK 369
           DK   L  +M  +
Sbjct: 188 DKGFTLLQEMTRR 200


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  224 bits (571), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 123/349 (35%), Positives = 198/349 (56%), Gaps = 5/349 (1%)

Query: 25  LINGLCRTGHTIVALNLFEEMANGNGEFGVV----CKPNTVTYTTIIDGLCKEGFVDKAK 80
           ++NG C+ G+ +V  NL  ++ +    F ++    C+ N V+YT +I GLC+ G VD+  
Sbjct: 1   MVNGYCKLGN-LVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGI 59

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            +F KM++++  P V TY  ++H    +    EA  LF EM ++G +PN+ ++ V++N +
Sbjct: 60  NIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK  K++E  R+L+ M++ G+ P+   YN L+DG+C  G V  A+E+   M S  C  N 
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ LI G+C+ K +  A++L S+ML   + P VV YN+L  G  +I  ++ A++L + 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M  +GV  D W Y  FID LCK G I EA  LF +L+    + +   Y  LIDG CK+G+
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  A  L   +     + +  TYN +I  LC + K+ +A  L   M  K
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348



 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 192/367 (52%), Gaps = 8/367 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  LF ++R  GCEPN+ TY  +IN +C+         + +EM     E G+V  P+ 
Sbjct: 91  MEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV----EKGLV--PSV 144

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +IDG CKEG V+ A+E+   M   + NPN  TYN LI GFC   + + A  L  +
Sbjct: 145 PTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSK 204

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++  + P+VV++N +++  CK G +D A RLL LM + GV P+ + Y+  +D  C  GR
Sbjct: 205 MLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGR 264

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  LF S++  G K N   Y+ LI+GYCK  +++ A SL   ML++   P+   YN 
Sbjct: 265 IEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNA 324

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +V+ A  L + M + G+      Y   I  + K G    A  +   +    
Sbjct: 325 LIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSG 384

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKA 359
           Y+ D+  Y   I   C  G +K A ++   +  RGV+  D +TY ++I A    G ++ A
Sbjct: 385 YQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVM-PDALTYTLVIDAYGGLGLLNPA 443

Query: 360 RDLFLDM 366
            D+   M
Sbjct: 444 FDVLKRM 450



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 180/364 (49%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++F  +   GC  N  +Y  LI+GLC  G     +N+F++M   +      C P   T
Sbjct: 23  AFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDD------CYPTVRT 76

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT I+  L + G   +A  LF +M++    PN+ TY  +I+  C      E + +  EM+
Sbjct: 77  YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P+V ++N +++  CK G ++ A  +L+LM      PN   YN L+ GFC    V+
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           RA  L   M       +V +Y+ LI+G CK   ++ A  L + M   G+ PD   Y+   
Sbjct: 197 RAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFI 256

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  ++E A  LF+ ++  G+ A+   Y   IDG CK G + +A  L   +      
Sbjct: 257 DTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCL 316

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LIDGLCK  +++ A  L  S+ +  L   V TY I+I A+  +G  D A  +
Sbjct: 317 PNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRI 376

Query: 363 FLDM 366
              M
Sbjct: 377 LDQM 380



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 176/382 (46%), Gaps = 37/382 (9%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A AL  K+      P+V TYN+LI+G C+ G+   A  L   M     E GVV  P+  T
Sbjct: 198 AMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM----NENGVV--PDQWT 251

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+  ID LCK+G +++A  LF  +K++ I  N V Y +LI G+C A   ++A  L   M+
Sbjct: 252 YSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRML 311

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PN  ++N +++ LCK  K+ EA  L+E MIQ G++     Y  L+      G  +
Sbjct: 312 TEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFD 371

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   M S G + +V+ Y+  I+ +C    I+ A  + S M  +G+ PD + Y  + 
Sbjct: 372 YAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVI 431

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-----------------NGY 285
                +  +  AF +   M   G       Y   I  L K                 N +
Sbjct: 432 DAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVF 491

Query: 286 IVE------------AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-P 332
             +            A+ELF  +       +I  Y  LI GLCK GRL +A +LF  +  
Sbjct: 492 FADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNE 551

Query: 333 RGVLIADVVTYNIMIHALCADG 354
           RGV  ++ + YN +++  C  G
Sbjct: 552 RGVSPSEAI-YNSLLNCCCELG 572



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 170/414 (41%), Gaps = 72/414 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  L+  G + N   Y  LI+G C+ G    A +L + M   +      C PN+ 
Sbjct: 267 EANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED------CLPNSS 320

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +IDGLCKE  V +A  L   M  + +   V TY  LI       D++ A  +  +M
Sbjct: 321 TYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQM 380

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QP+V  +   ++  C  G + EA  ++ +M + GV P+A  Y  ++D +   G +
Sbjct: 381 VSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLL 440

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNK--------------------------- 214
           N A ++   M   GC  +  +YS LI    K +                           
Sbjct: 441 NPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWK 500

Query: 215 --EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             + E AL L+ +ML  G  P++  Y  L IGL ++ ++  A KLFD M   GV+     
Sbjct: 501 MMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAI 560

Query: 273 YRTFIDGLCKNGYIVEAVEL-----------------------------------FRTLR 297
           Y + ++  C+ G   +AV L                                   F  L 
Sbjct: 561 YNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLL 620

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHAL 350
              Y  D  A+  LIDGL K+G      EL   +  RG  I    TY ++I  L
Sbjct: 621 QCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHP-QTYRMLIEGL 673


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 131/358 (36%), Positives = 192/358 (53%), Gaps = 6/358 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   G  PNV  Y TLI+G C+ G       LF +M    GE  VV   N  TYT +I+
Sbjct: 189 QMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKM----GELDVVA--NQYTYTVLIN 242

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G  K G      EL+ KMK   I PNV TYNS+I   C     N A  LF EM ++GV  
Sbjct: 243 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 302

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV++N ++  LC+  ++ EA RL+  M + G+ PN   YNTL+DG+C  G +++A  LF
Sbjct: 303 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 362

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M+S G   ++ +Y+ILI G+ + K   G   +  EM ++G+ P  V Y  L   L   
Sbjct: 363 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 422

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             +E+AF+++  M++ G+ AD + Y   I GLC  G + EA +LF++L  +  + +   Y
Sbjct: 423 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 482

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N +I G CK G    A  L + +    ++ +V +YN  I  LC D K  +A  L  DM
Sbjct: 483 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDM 540



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 164/304 (53%), Gaps = 6/304 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ K+++ G  PNV+TYN++I   C  G    A  LF+EM     E GV C  N VTY T
Sbjct: 256 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR----ERGVAC--NVVTYNT 309

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GLC+E  V +A+ L  +MK + ++PN+++YN+LI G+C   + ++A  LF +M   G
Sbjct: 310 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 369

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P++ ++N+++    +       + ++  M   G+ P+   Y  LMD    +  + +A 
Sbjct: 370 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 429

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +++ SME  G   +++ Y +LI+G C   +++ A  L+  +    +KP+ VIYNT+  G 
Sbjct: 430 QIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGY 489

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +     RA +L  EM  +G+  +  +Y + I  LCK+    EA  L + +  L  +  I
Sbjct: 490 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSI 549

Query: 306 RAYN 309
             +N
Sbjct: 550 SIWN 553



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 6/344 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF K+       N +TY  LING  + G     + L+E+M       G+V  PN  TY +
Sbjct: 221 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK----LTGIV--PNVYTYNS 274

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I   C +G ++ A ELF +M++  +  NVVTYN+LI G C      EA+ L   M   G
Sbjct: 275 MICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG 334

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PN++S+N +++  C  G +D+AS L   M   G  P+   YN L+ GF          
Sbjct: 335 LSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVT 394

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++   ME+ G   +  +Y+IL++   ++  IE A  +YS M   G+  D+ IY  L  GL
Sbjct: 395 DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 454

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             +  ++ A KLF  +    +  +   Y T I G CK G    A+ L + +       ++
Sbjct: 455 CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNV 514

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +YN  I  LCK  +   A  L + +    L   +  +N++  A
Sbjct: 515 ASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 558



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/311 (29%), Positives = 156/311 (50%), Gaps = 1/311 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           + + +  II+   +    ++A   F +M    + P   T+N+L+     +N + +A  +F
Sbjct: 94  HVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 153

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            E     V+ +V SF +++   C+ G +D+   +L  M ++G+ PN  VY TL+DG C  
Sbjct: 154 NET-KGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 212

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G + R ++LF  M  +    N ++Y++LING+ K    +  + LY +M   GI P+V  Y
Sbjct: 213 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 272

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++        ++  AF+LFDEM+  GVA +   Y T I GLC+   ++EA  L   ++ 
Sbjct: 273 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 332

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                ++ +YN LIDG C  G L  A  LF  +        + TYNI+I           
Sbjct: 333 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 392

Query: 359 ARDLFLDMEAK 369
             D+  +MEA+
Sbjct: 393 VTDMVREMEAR 403



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 6/238 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++R  G   NV TYNTLI GLC+    + A  L   M            PN ++
Sbjct: 288 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLIS 341

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C  G +DKA  LF +MK    +P++ TYN LI GF  A +      +  EM 
Sbjct: 342 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 401

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ V++ ++M+ L ++  +++A ++   M + G+  + ++Y  L+ G C+ G + 
Sbjct: 402 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 461

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            A +LF S++ M  K N   Y+ +I GYCK      AL L  EM   G+ P+V  YN+
Sbjct: 462 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 519


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 125/369 (33%), Positives = 205/369 (55%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A +LF +++  G  P++ TYNTLI+G  + G    ++ LFEEM        + C+P+ 
Sbjct: 149 LTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKF------MGCEPDV 202

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY  +I+  CK   + +A E F +MKD+++ PNV++Y++LI   C       A   F++
Sbjct: 203 ITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVD 262

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ PN  +++ +++  CK G + EA  L + M+Q  V  N   Y TL+DG C  G 
Sbjct: 263 MTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGM 322

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N AEELF +M   G   N+ +Y+ LI+G+ K + ++ A+ L++EM  K IKPD++++ T
Sbjct: 323 MNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGT 382

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL    ++E    +  EM+  G+ A+   Y T +D   K G   EA+ L   +R L 
Sbjct: 383 IVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLG 442

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E+ +  +  LIDGLCK G ++ A   F  +P   L  +V  Y  +I  LC +  +  A+
Sbjct: 443 TEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAK 502

Query: 361 DLFLDMEAK 369
            LF +M+ K
Sbjct: 503 KLFDEMQDK 511



 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  LF +++  GCEP+V TYN LIN  C+    + A   F EM + +       KPN +
Sbjct: 185 ESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKD------LKPNVI 238

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+T+ID LCKEG +  A + F+ M    + PN  TY+SLI   C A +  EA  L  EM
Sbjct: 239 SYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEM 298

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V  N+V++  +++ LC+ G M+EA  L   M + GV PN   Y  L+ G      +
Sbjct: 299 LQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSM 358

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A ELF  M     K ++  +  ++ G C   ++E    + +EM   GI  + VIY TL
Sbjct: 359 DKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTL 418

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               F+      A  L +EM+  G       +   IDGLCK G + EA+  F  +     
Sbjct: 419 MDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDL 478

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  Y  LIDGLCK+  +  A +LF  +    +I D + Y  MI      G   +A +
Sbjct: 479 QPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALN 538

Query: 362 L 362
           +
Sbjct: 539 M 539



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 187/360 (51%), Gaps = 6/360 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F+ +   G  PN FTY++LI+  C+ G+   A  L +EM   + +       N VT
Sbjct: 256 AIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDL------NIVT 309

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++DGLC+EG +++A+ELF  M    + PN+  Y +LIHG       ++A  LF EM 
Sbjct: 310 YTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMR 369

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ ++P+++ +  I+  LC   K++E   ++  M + G+  N  +Y TLMD +   G   
Sbjct: 370 EKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRT 429

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M  +G +  V ++  LI+G CK   ++ A+  +  M    ++P+V +Y  L 
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALI 489

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL + + +  A KLFDEMQ   +  D  AY   IDG  K+G   EA+ +   +  +  E
Sbjct: 490 DGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIE 549

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LD+ AY  L+ GL + G+++ A +    +    +I D      ++      G +D+A +L
Sbjct: 550 LDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIEL 609



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 170/315 (53%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VC P    +  +   L + G ++ A + FL+M    + P   + N+ +H    A + + +
Sbjct: 57  VCVPGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLS 116

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           +  F +M+  G+ P V ++N+++  +CK G M  A  L E M ++G+ P+   YNTL+DG
Sbjct: 117 RDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDG 176

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +   G ++ +  LF  M+ MGC+ +V +Y+ LIN +CK K +  A   + EM  K +KP+
Sbjct: 177 YGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V+ Y+TL   L +   ++ A K F +M R G+  + + Y + ID  CK G + EA  L  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +     +L+I  Y  L+DGLC+ G +  A ELFR++ +  +  ++  Y  +IH      
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 355 KMDKARDLFLDMEAK 369
            MDKA +LF +M  K
Sbjct: 357 SMDKAMELFNEMREK 371



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 136/300 (45%), Gaps = 41/300 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +   G  PN+  Y  LI+G  +      A+ LF EM   +       KP+ +
Sbjct: 325 EAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKD------IKPDIL 378

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + TI+ GLC E  +++ K +  +MK+  I  N V Y +L+  +  A +  EA  L  EM
Sbjct: 379 LWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEM 438

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G +  VV+F  +++ LCK G + EA      M    ++PN  VY  L+DG C    +
Sbjct: 439 RDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCI 498

Query: 182 NRAEELFVSMES-----------------------------------MGCKHNVFSYSIL 206
             A++LF  M+                                    MG + ++++Y+ L
Sbjct: 499 GDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSL 558

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + G  +  +++ A    +EM+ KGI PD  +   L    +E+  ++ A +L +E+   G+
Sbjct: 559 VWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 103/197 (52%), Gaps = 6/197 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++R  G E  V T+  LI+GLC+ G    A+  F  M + +       +PN  
Sbjct: 430 EAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHD------LQPNVA 483

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +IDGLCK   +  AK+LF +M+D+N+ P+ + Y ++I G     ++ EA  +  +M
Sbjct: 484 VYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKM 543

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G++ ++ ++  ++  L + G++ +A + L  MI  G+ P+  +   L+      G +
Sbjct: 544 MEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNI 603

Query: 182 NRAEELFVSMESMGCKH 198
           + A EL   +   G  H
Sbjct: 604 DEAIELQNELVEKGLIH 620


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  224 bits (570), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 130/393 (33%), Positives = 203/393 (51%), Gaps = 27/393 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM---------------- 45
           EA  LF    +  CEP+V +YN +I+G C  G    AL L EEM                
Sbjct: 95  EAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPII 154

Query: 46  ---ANGNGEFGVV-------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
              AN     G +       C PN VTYT +I    +   +++A +L  +M++    PN+
Sbjct: 155 TAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNL 214

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           VTYN L+   C  +    A+ +  +M++ G  PNV++FN +++  CK G +D+A +LL +
Sbjct: 215 VTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGI 274

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G+RPN   Y+ L+DG C + +   A+E+   M++ G   + F+YS LI+G CK  +
Sbjct: 275 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADK 334

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           IE A  +   M   G  PDVV+Y+++     +  ++  A K   EM++   + D   Y T
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 394

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
            IDGLCK G I EA  +   ++     L D+  Y+ +I+GLCKS  L  A +L   + + 
Sbjct: 395 VIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 454

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
               DVVTY  +I  LC  G++++A  L   M+
Sbjct: 455 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMK 487



 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/399 (32%), Positives = 201/399 (50%), Gaps = 32/399 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  L  ++R  GC PN+ TYN L++ LC+      A ++ ++M  G     V+      
Sbjct: 197 EAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLV 256

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                    PN VTY+ +IDGLCK     +AKE+  +MK   + 
Sbjct: 257 DGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVT 316

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  TY++LIHG C A+   EA+ +   M   G  P+VV ++ I++  CK+GK+ EA + 
Sbjct: 317 PDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKT 376

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYC 211
           L+ M +    P+   YNT++DG C  G++  A+ +   M+  G    +V +YS +ING C
Sbjct: 377 LQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLC 436

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+  +  A  L   M   G  PDVV Y T+  GL +  ++E A  L   M+R G A +  
Sbjct: 437 KSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVV 496

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y T I GLCK   + EA  +   +R      ++  YN +++GLC SGR+K A +L + +
Sbjct: 497 TYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556

Query: 332 P--RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              R     D  TY  +++AL +   + +A  L   M++
Sbjct: 557 KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 100/300 (33%), Positives = 170/300 (56%), Gaps = 9/300 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  +++  G  P+ FTY+ LI+GLC+      A  +   MA G+G     C P+ 
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMA-GSG-----CTPDV 354

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y++II   CK G + +A++   +M+ +  +P+VVTYN++I G C      EA+ +  +
Sbjct: 355 VVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQ 414

Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M + G V P+VV+++ ++N LCK+  + EA +LL+ M + G  P+   Y T++DG C  G
Sbjct: 415 MQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCG 474

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+  AE L   M+  GC  NV +Y+ LI+G CK ++++ A  +  EM + G  P++V YN
Sbjct: 475 RLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYN 534

Query: 240 TLFIGLFEIHQVERAFKLFDEMQ--RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           T+  GL    +++ A +L   M+  R   + D   YRT ++ L  +  + EA +L   ++
Sbjct: 535 TMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMK 594



 Score =  150 bits (379), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 128/230 (55%), Gaps = 7/230 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     ++R     P+V TYNT+I+GLC+ G    A  + E+M     E G V  P+ 
Sbjct: 371 LEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQ----ESGDVL-PDV 425

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I+GLCK   + +A++L  +M     NP+VVTY ++I G C      EA+ L   
Sbjct: 426 VTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQG 485

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PNVV++  +++ LCK  K+DEA R++E M   G  PN   YNT+++G C++GR
Sbjct: 486 MKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGR 545

Query: 181 VNRAEELFVSMES--MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           +  A++L   M+     C  +  +Y  ++N    +  ++ A  L  +M S
Sbjct: 546 IKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 134/270 (49%), Gaps = 3/270 (1%)

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           ++NSL+          EA  LF   +    +P+V S+N++++  C  G +  A  LLE M
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G  P+AF +  ++      G ++ A +    + SMGC  NV +Y+ LI  + + K++
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAAFARAKKL 195

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A+ L  EM  +G  P++V YN L   L ++  V  A  +  +M   G A +   + + 
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +DG CK G + +A +L   +       ++  Y+ LIDGLCKS +   A E+   +    +
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
             D  TY+ +IH LC   K+++A  +   M
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRM 345



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 116/245 (47%), Gaps = 3/245 (1%)

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G      S+N ++  L +  K  EA  L    +     P+   YN ++ GFC  G ++ A
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            EL   M+S G   + F+++ +I       +++GA+     + S G  P+VV Y  L   
Sbjct: 132 LELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMD---HLRSMGCDPNVVTYTALIAA 188

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
                ++E A KL +EM+  G   +   Y   +D LCK   +  A ++ + +    +  +
Sbjct: 189 FARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPN 248

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  +N L+DG CK G +  A +L   +    +  +VVTY+ +I  LC   K  +A+++  
Sbjct: 249 VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLE 308

Query: 365 DMEAK 369
           +M+ +
Sbjct: 309 EMKTR 313


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 197/366 (53%), Gaps = 11/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A +L   +   GC+PNV TY  L+  +CR      A+ + +EM A G       C PN 
Sbjct: 161 DALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKG-------CTPNI 213

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  II+G+C+EG VD A+EL  ++      P+ V+Y +L+ G C +  W++ + LF E
Sbjct: 214 VTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAE 273

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM++   PN V+F++++   C+ G ++ A ++LE M + G   N  + N +++  C  GR
Sbjct: 274 MMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGR 333

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A +L   M S GC  +  SY+ ++ G C+ +  + A  L +EM+     P+ V +NT
Sbjct: 334 VDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNT 393

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               L +   +E+A  L ++M  HG       Y   ++G C  G+I  A+ELFR+   + 
Sbjct: 394 FICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRS---MP 450

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +   Y  L+ GLC + RL  A EL   + RG    +VVT+N+++   C  G +++A 
Sbjct: 451 CKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAI 510

Query: 361 DLFLDM 366
           +L   M
Sbjct: 511 ELVEQM 516



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 184/361 (50%), Gaps = 9/361 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF ++    C PN  T++ LI   CR G    A+ + E+M     E G  C  NT     
Sbjct: 270 LFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMT----EHG--CATNTTLCNI 323

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+ +CK+G VD A +L   M     NP+ ++Y +++ G C A  W++AK L  EM+   
Sbjct: 324 VINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNN 383

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             PN V+FN  +  LC+ G +++A  L+E M + G       YN L++GFC+ G ++ A 
Sbjct: 384 CPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSAL 443

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ELF    SM CK N  +Y+ L+ G C  + ++GA  L +EML     P+VV +N L    
Sbjct: 444 ELF---RSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFF 500

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   +E A +L ++M  HG   +   Y T +DG+ K+    +A+EL   L       D+
Sbjct: 501 CQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDV 560

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             ++ +I  L K  R++ A +LF  +    +    V YN ++  LC   ++D A D F  
Sbjct: 561 ITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAY 620

Query: 366 M 366
           M
Sbjct: 621 M 621



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 190/397 (47%), Gaps = 44/397 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+  ++R  GC PN+ TYN +ING+CR G    A  L   + +    +G   +P+TV
Sbjct: 196 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPS----YGF--QPDTV 249

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YTT++ GLC     D  +ELF +M ++N  PN VT++ LI  FC       A  +  +M
Sbjct: 250 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQM 309

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G   N    N+++N +CK G++D+A +LL  M   G  P+   Y T++ G C   R 
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERW 369

Query: 182 NRAEELFVSM--------------------------------ESM---GCKHNVFSYSIL 206
           + A+EL   M                                E M   GC   V +Y+ L
Sbjct: 370 DDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNAL 429

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG+C    I+ AL L+  M     KP+ + Y TL  GL    +++ A +L  EM R   
Sbjct: 430 VNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDC 486

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +   +   +   C+ G++ EA+EL   +       ++  YN L+DG+ K    + A E
Sbjct: 487 PPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALE 546

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L   L    +  DV+T++ +I  L  + ++++A  LF
Sbjct: 547 LLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLF 583



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 176/360 (48%), Gaps = 12/360 (3%)

Query: 3   AAALFMKLRVFGCE---PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           A A+ +  R   C+   P+V+    LI  LCR G T  A  +    A G+G        +
Sbjct: 57  AGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLR-AAEGSGS-----PVD 110

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
              Y T++ G C+ G +D A+ L   M    + P+  TY  LI   C      +A  L  
Sbjct: 111 VFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLD 167

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+ +G QPNVV++ V++  +C+N   ++A  +L+ M   G  PN   YN +++G C  G
Sbjct: 168 DMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREG 227

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           RV+ A EL   + S G + +  SY+ L+ G C +K  +    L++EM+ K   P+ V ++
Sbjct: 228 RVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFD 287

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L         VERA ++ ++M  HG A +T      I+ +CK G + +A +L   +   
Sbjct: 288 MLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSY 347

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D  +Y  ++ GLC++ R   A EL   + R     + VT+N  I  LC  G +++A
Sbjct: 348 GCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQA 407



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/295 (33%), Positives = 149/295 (50%), Gaps = 9/295 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++    C PN  T+NT I  LC+ G    A+ L E+M+      GVV      
Sbjct: 371 DAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVV------ 424

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++G C +G +D A ELF  M      PN +TY +L+ G C A   + A  L  EM
Sbjct: 425 TYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAELVAEM 481

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PNVV+FNV+++  C+ G ++EA  L+E M++ G  PN   YNTL+DG       
Sbjct: 482 LRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSS 541

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   + S G   +V ++S +I    K   IE A+ L+  +   G++P  V+YN +
Sbjct: 542 EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKI 601

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +GL +  +++ A   F  M  +G   +   Y   I+GL   G + EA +L   L
Sbjct: 602 LLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVL 656



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 136/265 (51%), Gaps = 9/265 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GC   V TYN L+NG C  GH   AL LF  M          CKPNT+
Sbjct: 406 QAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---------CKPNTI 456

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ GLC    +D A EL  +M   +  PNVVT+N L+  FC      EA  L  +M
Sbjct: 457 TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM 516

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN++++N +++ + K+   ++A  LL  ++  GV P+   +++++       R+
Sbjct: 517 MEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRI 576

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  ++ +G +     Y+ ++ G CK  EI+ A+  ++ M+S G  P+   Y  L
Sbjct: 577 EEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIIL 636

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
             GL     ++ A  L   +   GV
Sbjct: 637 IEGLAHEGLLKEAQDLLSVLCSRGV 661



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 3/210 (1%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G  P+ ++   L+   C  GR + A  +  + E  G   +VF+Y+ L+ GYC+   ++ A
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             L   M    + PD   Y  L   L +  +V  A  L D+M R G   +   Y   ++ 
Sbjct: 131 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           +C+N    +A+ +   +R      +I  YN +I+G+C+ GR+  A EL   LP      D
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            V+Y  ++  LCA  + D   +LF +M  K
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEK 277


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 123/345 (35%), Positives = 196/345 (56%), Gaps = 6/345 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G +P+  T+ TLINGLC  G    A+ LF EMA      G    PNTVT
Sbjct: 140 AVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMA------GRDAMPNTVT 193

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T ++D LCK+G V +A+ +F  M ++ + PN+ TYN+L++G+C   + N+A  +F  M+
Sbjct: 194 FTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV 253

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+V S+++++N  CK+ ++DEA  LL  M +  + PN   YNTLM G C    + 
Sbjct: 254 GKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLL 313

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ELF  M S G   N+ +YSIL++G CK+  +E AL L + M  + ++PD+V+YN L 
Sbjct: 314 EAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILI 373

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+F   ++E A +LF ++  +G+      Y   I GL K G   EA +LFR +    + 
Sbjct: 374 QGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFL 433

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            D  +YN +I G  ++     A +L   +      AD  T+ +++
Sbjct: 434 PDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 125/316 (39%), Positives = 180/316 (56%), Gaps = 2/316 (0%)

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
           FGV    N  T   +I+ LC+   +  A  +  KM    I P+ VT+ +LI+G C     
Sbjct: 115 FGVA--HNDYTLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRI 172

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            EA  LF EM  +   PN V+F ++++ LCK G + EA  + E M + GV PN + YN L
Sbjct: 173 KEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNAL 232

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           M+G+CL   +N A ++F  M   GC  +V SYSILINGYCK++ I+ A +L ++M  K +
Sbjct: 233 MNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKEL 292

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+ V YNTL  GL     +  A +LF +M   G+  +   Y   +DGLCK+G++ EA++
Sbjct: 293 IPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALK 352

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L  +++  K E DI  YN LI G+  +G+L++A ELF  L    +   V TYNIMI  L 
Sbjct: 353 LLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLL 412

Query: 352 ADGKMDKARDLFLDME 367
            +G  D+A  LF  ME
Sbjct: 413 KEGLSDEAYKLFRKME 428



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 188/358 (52%), Gaps = 6/358 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++ +FG   N +T N LIN LCR  H   A+++  +M      F +  +P++VT+TT+I+
Sbjct: 111 QMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVLSKM------FKLGIQPDSVTFTTLIN 164

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC EG + +A ELF +M   +  PN VT+  L+   C     +EA+C+F  M ++GV+P
Sbjct: 165 GLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEP 224

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N+ ++N +MN  C   +M++AS++ E+M+  G  P+   Y+ L++G+C + R++ A+ L 
Sbjct: 225 NIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALL 284

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M       N  +Y+ L+ G C    +  A  L+ +M S G+ P++  Y+ L  GL + 
Sbjct: 285 TQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKH 344

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             +E A KL   MQ   +  D   Y   I G+   G +  A ELF  L        +R Y
Sbjct: 345 GHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTY 404

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N +I GL K G    A++LFR +     + D  +YN++I     +     A  L  +M
Sbjct: 405 NIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEM 462



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 156/277 (56%), Gaps = 6/277 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G EPN++TYN L+NG C       A  +FE M  G G     C P+  
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV-GKG-----CAPSVH 262

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ +I+G CK   +D+AK L  +M ++ + PN VTYN+L+ G C+A+   EA+ LF +M
Sbjct: 263 SYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKM 322

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN+ +++++++ LCK+G ++EA +LL  M +  + P+  +YN L+ G  + G++
Sbjct: 323 CSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKL 382

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ELF  + + G + +V +Y+I+I G  K    + A  L+ +M   G  PD   YN +
Sbjct: 383 EVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVI 442

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             G  +      A +L DEM     +AD+  ++  +D
Sbjct: 443 IQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 150/323 (46%), Gaps = 35/323 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F +M   N  P+ V     +        ++    L  +M   GV  N  + N+
Sbjct: 67  IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC+   +  A  +L  M ++G++P++  + TL++G C  GR+  A ELF  M    
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG----------- 244
              N  +++IL++  CK   +  A  ++  M  KG++P++  YN L  G           
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246

Query: 245 -LFEI-----------------------HQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +FEI                        +++ A  L  +M    +  +T  Y T + GL
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           C    ++EA ELF+ +       ++R Y+ L+DGLCK G L+ A +L  S+    L  D+
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDI 366

Query: 341 VTYNIMIHALCADGKMDKARDLF 363
           V YNI+I  +   GK++ A++LF
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELF 389



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 6/173 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF K+   G  PN+ TY+ L++GLC+ GH   AL L   M     E      P+ 
Sbjct: 313 LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE------PDI 366

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +I G+   G ++ AKELF K+    I P+V TYN +I G       +EA  LF +
Sbjct: 367 VLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRK 426

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           M D G  P+  S+NVI+    +N     A +L++ M+      ++  +  L+D
Sbjct: 427 MEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLD 479


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 195/360 (54%), Gaps = 6/360 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F ++   GC PNV TYNTLI+  C+ G    A  L + M++         +PN ++Y  I
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG------MQPNLISYNVI 290

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I+GLC+EG + +A E+  +M  +   P+ VTYN+L++G+C   ++++A  +  EM+  GV
Sbjct: 291 INGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 350

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            P+VV++  ++N +CK   ++ A    + M   G+RPN   Y TL+DGF   G +N A  
Sbjct: 351 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYR 410

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +   M   G   +V +Y+  I+G+C  + +E AL +  EM+ KG+ PDVV Y+T+  G  
Sbjct: 411 ILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC 470

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              +++RAF++  EM   GV+ D   Y + I GLC+   + EA +L + +  +    D  
Sbjct: 471 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 530

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y  LI+  C  G L  A  L   +     + D VTY+++I+ L    +  +A+ L   +
Sbjct: 531 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 590



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 191/367 (52%), Gaps = 21/367 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TY  LIN +C+  +   A+  F++M           +PN  TYTT+IDG  ++
Sbjct: 349 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG------LRPNERTYTTLIDGFSRQ 402

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A  +  +M +   +P+VVTYN+ IHG C      EA  +  EM+++G+ P+VVS+
Sbjct: 403 GLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSY 462

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I++  C+ G++D A ++ + M++ GV P+A  Y++L+ G C   R+  A +L   M  
Sbjct: 463 STIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLD 522

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           MG   + F+Y+ LIN YC   ++  AL L+ EM+ KG  PD V Y+ L  GL +  +   
Sbjct: 523 MGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTRE 582

Query: 254 A----FKL-FDEMQRHGVAADTW----------AYRTFIDGLCKNGYIVEAVELFRTLRI 298
           A    FKL ++E     V  DT           +    I G C  G + EA  +F ++  
Sbjct: 583 AKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 642

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             ++     YN +I G C+ G L  A+ L++ +     +   VT   +I AL  +G  ++
Sbjct: 643 RNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 702

Query: 359 ARDLFLD 365
             ++  D
Sbjct: 703 MSEVIGD 709



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 189/380 (49%), Gaps = 21/380 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G +PN+ +YN +INGLCR G    A  + EEM    G  G    P+ V
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM----GYKGFT--PDEV 320

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++G CKEG   +A  +  +M    ++P+VVTY +LI+  C A + N A   F +M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN  ++  +++   + G ++EA R+L  M + G  P+   YN  + G C+  R+
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 440

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M   G   +V SYS +I+G+C+  E++ A  +  EM+ KG+ PD V Y++L
Sbjct: 441 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 500

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL E+ ++  A  L  EM   G+  D + Y T I+  C  G + +A+ L   +    +
Sbjct: 501 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 560

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH------------- 348
             D   Y+ LI+GL K  R + A  L   L     +   VTY+ +I              
Sbjct: 561 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL 620

Query: 349 --ALCADGKMDKARDLFLDM 366
               C  G M +A  +F  M
Sbjct: 621 IKGFCMKGLMHEADRVFESM 640



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 165/314 (52%), Gaps = 2/314 (0%)

Query: 58  PNTVTYTTIIDGLCKE-GFVD-KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           P  ++Y +++D + +  G V   A+E++ +M    ++PNV TYN LI GFC   +  +  
Sbjct: 175 PGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGL 234

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
             F EM   G  PNVV++N +++  CK G++DEA  LL+ M   G++PN   YN +++G 
Sbjct: 235 GCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGL 294

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G +  A E+   M   G   +  +Y+ L+NGYCK      AL +++EM+  G+ P V
Sbjct: 295 CREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSV 354

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V Y  L   + +   + RA + FD+M+  G+  +   Y T IDG  + G + EA  +   
Sbjct: 355 VTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNE 414

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +    +   +  YN  I G C   R++ A  + + +    L  DVV+Y+ +I   C  G+
Sbjct: 415 MTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGE 474

Query: 356 MDKARDLFLDMEAK 369
           +D+A  +  +M  K
Sbjct: 475 LDRAFQMKQEMVEK 488



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 146/296 (49%), Gaps = 2/296 (0%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE--AKCLFIEMMDQGVQPNVVSF 133
           +D+A       K     P V++YNS++     +    +  A+ ++ EM+   V PNV ++
Sbjct: 158 IDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTY 217

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++   C  G++ +       M + G  PN   YNTL+D +C  GR++ A  L  SM S
Sbjct: 218 NILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSS 277

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + N+ SY+++ING C+   ++ A  +  EM  KG  PD V YNTL  G  +     +
Sbjct: 278 KGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQ 337

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +  EM R+GV+     Y   I+ +CK   +  A+E F  +RI     + R Y  LID
Sbjct: 338 ALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLID 397

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G  + G L  A+ +   +        VVTYN  IH  C   +M++A  +  +M  K
Sbjct: 398 GFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 453



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 117/239 (48%), Gaps = 2/239 (0%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT-GRVN-RAEELFVS 190
           F++++        +D+A   + L    G  P    YN+++D    + G V   AEE++  
Sbjct: 145 FDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYRE 204

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M       NV++Y+ILI G+C   E++  L  + EM   G  P+VV YNTL     ++ +
Sbjct: 205 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 264

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ AF L   M   G+  +  +Y   I+GLC+ G + EA E+   +    +  D   YN 
Sbjct: 265 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 324

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L++G CK G    A  +   + R  +   VVTY  +I+++C    +++A + F  M  +
Sbjct: 325 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 383



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +     +P    YN +I+G CR G+   A NL++EM +     G V  P+TV
Sbjct: 632 EADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHS----GFV--PHTV 685

Query: 62  TYTTIIDGLCKEGFVDKAKEL 82
           T  T+I  L KEG  ++  E+
Sbjct: 686 TVITLIKALFKEGMNEEMSEV 706


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/399 (33%), Positives = 210/399 (52%), Gaps = 36/399 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----------- 50
           EAA  F  +   G +P++ TY+ L++G    G+ +  LNLF  M  GNG           
Sbjct: 350 EAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM-EGNGIVADHSVYNIL 408

Query: 51  ---------------------EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
                                E GV+  P+  TY T+I    + G +  A + F +M   
Sbjct: 409 IDAYGKRGMMDEAMLIFTQMQERGVM--PDAWTYGTVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV-QPNVVSFNVIMNELCKNGKMDE 148
            + P+ + YNSLI GFC   +  +AK L  EMM +G+ +PN V FN I+N LCK G++ E
Sbjct: 467 GLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVE 526

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A  + +L+I IG RP+   +N+L+DG+ L G++ +A  +  +M S+G + +V +YS L++
Sbjct: 527 AQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLD 586

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           GYC+N  I+  L L+ EMLSKG+KP  + Y  +  GLF   +   A K+  EM   G   
Sbjct: 587 GYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           D       + GLC+N    EA+ LF+ L  +  + +I   N +ID + K  + + A ELF
Sbjct: 647 DISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELF 706

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            S+    L+ +  TY +MI  L  +G +++A ++F  ME
Sbjct: 707 DSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLME 745



 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 189/359 (52%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G EP+  +Y+T++  LC    +  AL+L   M   +G     C PN V+Y T
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGG----CSPNVVSYNT 232

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G  +EG V KA  LF +M  + + P+VVTY+S I   C A   ++A+ +  +M+  G
Sbjct: 233 VIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNG 292

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +P+ V++N +++     G+  E + +   M + G+ P+ F  N+ M   C  G+   A 
Sbjct: 293 FEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAA 352

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E F SM + G K ++ +YS+L++GY     +   L+L++ M   GI  D  +YN L    
Sbjct: 353 EFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAY 412

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A  +F +MQ  GV  D W Y T I    + G + +A++ F  +  +  + D 
Sbjct: 413 GKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDT 472

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             YN LI G C  G L  A EL    + RG+   + V +N +I++LC +G++ +A+D+F
Sbjct: 473 IVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIF 531



 Score =  157 bits (398), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 186/401 (46%), Gaps = 42/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P+V TY++ I+ LC+      A  +  +M +   E      P+ V
Sbjct: 245 KACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFE------PDKV 298

Query: 62  TYTTIIDG-----------------------------------LCKEGFVDKAKELFLKM 86
           TY  +I G                                   LCK G   +A E F  M
Sbjct: 299 TYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSM 358

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
             +   P++VTY+ L+HG+       +   LF  M   G+  +   +N++++   K G M
Sbjct: 359 AAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMM 418

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA  +   M + GV P+A+ Y T++  F   GR+  A + F  M +MG K +   Y+ L
Sbjct: 419 DEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSL 478

Query: 207 INGYCKNKEIEGALSLYSEMLSKGI-KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           I G+C +  +  A  L SEM+S+GI +P+ V +N++   L +  +V  A  +FD +   G
Sbjct: 479 IQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIG 538

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   + + IDG    G + +A  +   +  +  E D+  Y+ L+DG C++GR+    
Sbjct: 539 ERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGL 598

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LFR +    +    +TY I++H L  DG+   A+ +  +M
Sbjct: 599 ILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEM 639



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 141/279 (50%), Gaps = 3/279 (1%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA-SR 151
           P V TYN L+   C A+       LF   +  G++ +V+  N+++  LC   + D+A + 
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM--ESMGCKHNVFSYSILING 209
           LL  M ++GV P+   Y+T++   C   R  RA +L  +M  +S GC  NV SY+ +I+G
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           + +  E+  A +L+ EM+ +G+ PDVV Y++    L +   +++A  +  +M  +G   D
Sbjct: 237 FFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   I G    G   E   +FR +       DI   N  +  LCK G+ K A E F 
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           S+       D+VTY++++H   A+G +    +LF  ME 
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEG 395



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F  +   G  P+V T+N+LI+G    G    A  + + M        V  +P+ 
Sbjct: 525 VEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAM------ISVGIEPDV 578

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ ++DG C+ G +D    LF +M  + + P  +TY  ++HG         AK +  E
Sbjct: 579 VTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G   ++ +  +I+  LC+N   DEA  L + +  + V+ N  + NT++D      +
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A ELF S+ + G   N  +Y ++I    K   +E A +++S M   G  P   + N 
Sbjct: 699 REEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNN 758

Query: 241 LFIGLFEIHQVERA 254
           +   L E  ++ +A
Sbjct: 759 IIRVLLEKGEISKA 772



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/255 (28%), Positives = 121/255 (47%), Gaps = 15/255 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+V TY+ L++G CR G     L LF EM +     GV  KP T+TY  I+ GL  +
Sbjct: 573 GIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSK----GV--KPTTITYGIILHGLFND 626

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    AK++  +M +     ++ T   ++ G C  N  +EA  LF ++    V+ N+   
Sbjct: 627 GRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAII 686

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ + K  K +EA+ L + +   G+ PNA  Y  ++      G V  A+ +F  ME 
Sbjct: 687 NTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEK 746

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF------- 246
            GC  +    + +I    +  EI  A +  S++  K I  +     +L + LF       
Sbjct: 747 SGCAPSSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTA-SLMLSLFSRKGKYR 805

Query: 247 -EIHQVERAFKLFDE 260
            +I  +   ++ FDE
Sbjct: 806 EQIKSLPAMYQFFDE 820



 Score = 45.1 bits (105), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 55/130 (42%), Gaps = 18/130 (13%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGL--------CKNGYIVEAVELFRTLRILKY 301
             E    LFDE+ R        A   F+  L        C++G  + AV LF   RI + 
Sbjct: 52  STEDTHHLFDELLRQTTPVPERALNGFLTALARAPSSATCRDGPSL-AVALFN--RICRE 108

Query: 302 ELDIR-------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           E   R        YN L+D  C++ R  + + LF    +  L  DV+  NI++  LC   
Sbjct: 109 EARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAK 168

Query: 355 KMDKARDLFL 364
           + D A ++ L
Sbjct: 169 RSDDAVNVLL 178


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/358 (36%), Positives = 192/358 (53%), Gaps = 6/358 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   G  PNV  Y TLI+G C+ G       LF +M    GE  VV   N  TYT +I+
Sbjct: 176 QMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKM----GELDVVA--NQYTYTVLIN 229

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G  K G      EL+ KMK   I PNV TYNS+I   C     N A  LF EM ++GV  
Sbjct: 230 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 289

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV++N ++  LC+  ++ EA RL+  M + G+ PN   YNTL+DG+C  G +++A  LF
Sbjct: 290 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 349

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M+S G   ++ +Y+ILI G+ + K   G   +  EM ++G+ P  V Y  L   L   
Sbjct: 350 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 409

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             +E+AF+++  M++ G+ AD + Y   I GLC  G + EA +LF++L  +  + +   Y
Sbjct: 410 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 469

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N +I G CK G    A  L + +    ++ +V +YN  I  LC D K  +A  L  DM
Sbjct: 470 NTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDM 527



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/304 (31%), Positives = 164/304 (53%), Gaps = 6/304 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ K+++ G  PNV+TYN++I   C  G    A  LF+EM     E GV C  N VTY T
Sbjct: 243 LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMR----ERGVAC--NVVTYNT 296

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GLC+E  V +A+ L  +MK + ++PN+++YN+LI G+C   + ++A  LF +M   G
Sbjct: 297 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 356

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P++ ++N+++    +       + ++  M   G+ P+   Y  LMD    +  + +A 
Sbjct: 357 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 416

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +++ SME  G   +++ Y +LI+G C   +++ A  L+  +    +KP+ VIYNT+  G 
Sbjct: 417 QIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGY 476

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +     RA +L  EM  +G+  +  +Y + I  LCK+    EA  L + +  L  +  I
Sbjct: 477 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSI 536

Query: 306 RAYN 309
             +N
Sbjct: 537 SIWN 540



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 165/344 (47%), Gaps = 6/344 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF K+       N +TY  LING  + G     + L+E+M       G+V  PN  TY +
Sbjct: 208 LFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMK----LTGIV--PNVYTYNS 261

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I   C +G ++ A ELF +M++  +  NVVTYN+LI G C      EA+ L   M   G
Sbjct: 262 MICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG 321

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PN++S+N +++  C  G +D+AS L   M   G  P+   YN L+ GF          
Sbjct: 322 LSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVT 381

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++   ME+ G   +  +Y+IL++   ++  IE A  +YS M   G+  D+ IY  L  GL
Sbjct: 382 DMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGL 441

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             +  ++ A KLF  +    +  +   Y T I G CK G    A+ L + +       ++
Sbjct: 442 CVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNV 501

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +YN  I  LCK  +   A  L + +    L   +  +N++  A
Sbjct: 502 ASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKA 545



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 155/311 (49%), Gaps = 1/311 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           + + +  II+   +    ++A     +M    + P   T+N+L+     +N + +A  +F
Sbjct: 81  HVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVF 140

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            E     V+ +V SF +++   C+ G +D+   +L  M ++G+ PN  VY TL+DG C  
Sbjct: 141 NETKGN-VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKN 199

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G + R ++LF  M  +    N ++Y++LING+ K    +  + LY +M   GI P+V  Y
Sbjct: 200 GDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTY 259

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++        ++  AF+LFDEM+  GVA +   Y T I GLC+   ++EA  L   ++ 
Sbjct: 260 NSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKR 319

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                ++ +YN LIDG C  G L  A  LF  +        + TYNI+I           
Sbjct: 320 DGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAG 379

Query: 359 ARDLFLDMEAK 369
             D+  +MEA+
Sbjct: 380 VTDMVREMEAR 390



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 127/238 (53%), Gaps = 6/238 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++R  G   NV TYNTLI GLC+    + A  L   M            PN ++
Sbjct: 275 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDG------LSPNLIS 328

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C  G +DKA  LF +MK    +P++ TYN LI GF  A +      +  EM 
Sbjct: 329 YNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREME 388

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ V++ ++M+ L ++  +++A ++   M + G+  + ++Y  L+ G C+ G + 
Sbjct: 389 ARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMK 448

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            A +LF S++ M  K N   Y+ +I GYCK      AL L  EM   G+ P+V  YN+
Sbjct: 449 EASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNS 506


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 190/355 (53%), Gaps = 12/355 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           C PN+ T+NTLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           KEG ++ A E+  +M    + PNVV YN+++ G C A  W EA+ L  EM  +    + V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FN++++  C+NG +D    LLE M+  G  P+   Y T+++GFC  G ++ A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            S GCK N  SY+I++ G C       A  L S+M+ +G  P+ V +NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E+A +L  +M  +G + D  +Y T IDGL K G   EA+EL   +       +   Y+ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L + GR+    ++F ++    + +D V YN +I +LC   + D+A D F  M
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 183/362 (50%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  KL  FGCE ++ +YN ++ GLC          L +EM        V C PN V
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIV 252

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I  LC+ G  ++  E+  +M +    P++  Y ++I G C       A  +   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV +N ++  LC   +  EA  LL  M Q     +   +N L+D FC  G V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +R  EL   M S GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP+ V Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +   
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y+ +IDGL K+G+ + A EL   +    +  + + Y+ +  AL  +G+++K   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 362 LF 363
           +F
Sbjct: 553 MF 554



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 178/354 (50%), Gaps = 8/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P    Y+ ++   CR+G    ++ + E M A G       C  +T     +++ +C+
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-------CTLDTGNCNLVLNAICE 193

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +G VD+A  L  K+       ++V+YN+++ G C A  W + + L  EM+     PN+V+
Sbjct: 194 QGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN ++  LC+NG  +    +L  M + G  P+  +Y T++DG C  G +  A E+   M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G K NV  Y+ ++ G C  +  + A  L SEM  K    D V +N L     +   V+
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           R  +L ++M  HG   D   Y T I+G CK G I EAV L +++     + +  +Y  ++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GLC +GR   A EL   + +     + VT+N +I+ LC  G +++A +L   M
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++    C  +  T+N L++  C+ G     + L E+M +        C P+ +
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG------CMPDVI 392

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+G CKEG +D+A  L   M      PN V+Y  ++ G C A  W +A+ L  +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  PN V+FN ++N LCK G +++A  LL+ M+  G  P+   Y+T++DG    G+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M + G   N   YS +     +   +   + ++  +    I+ D V+YN +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  + +RA   F  M  +G   +   Y   I GL   G   EA EL   L
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 6/260 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+V TY T+ING C+ G    A+ L + M++        CKPNTV+YT 
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG------CKPNTVSYTI 431

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GLC  G    A+EL  +M  +   PN VT+N+LI+  C      +A  L  +M+  G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+++S++ +++ L K GK +EA  LL +M+  G+ PN  +Y+++       GRVN+  
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F +++    + +   Y+ +I+  CK  E + A+  ++ M+S G  P+   Y  L  GL
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 246 FEIHQVERAFKLFDEMQRHG 265
                 + A +L  E+   G
Sbjct: 612 ASEGLAKEAQELLSELCSRG 631



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 3/275 (1%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           VV YN+++ G+C A    +            V PN  +F  ++  LC  G++ +A  +L+
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  P   +Y+ +++  C +G    +  +  +M + GC  +  + ++++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++ A+ L  ++   G + D+V YN +  GL    +     +L DEM R   A +   + 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I  LC+NG      E+   +       DIR Y  +IDG+CK G L++A E+   +P  
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  +VV YN ++  LC+  +  +A +L  +M  K
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC PN  T+NTLIN LC+ G    A+ L ++M  NG       C P+
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 495

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  ++A EL   M ++ I+PN + Y+S+          N+   +F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK  + D A      M+  G  PN   Y  L+ G    G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
               A+EL   + S G   KH +  + I+
Sbjct: 616 LAKEAQELLSELCSRGALRKHLMRHFGIV 644


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 190/355 (53%), Gaps = 12/355 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           C PN+ T+NTLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           KEG ++ A E+  +M    + PNVV YN+++ G C A  W EA+ L  EM  +    + V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FN++++  C+NG +D    LLE M+  G  P+   Y T+++GFC  G ++ A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            S GCK N  SY+I++ G C       A  L S+M+ +G  P+ V +NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E+A +L  +M  +G + D  +Y T IDGL K G   EA+EL   +       +   Y+ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L + GR+    ++F ++    + +D V YN +I +LC   + D+A D F  M
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 183/362 (50%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  KL  FGCE ++ +YN ++ GLC          L +EM        V C PN V
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIV 252

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I  LC+ G  ++  E+  +M +    P++  Y ++I G C       A  +   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV +N ++  LC   +  EA  LL  M Q     +   +N L+D FC  G V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +R  EL   M S GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP+ V Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +   
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y+ +IDGL K+G+ + A EL   +    +  + + Y+ +  AL  +G+++K   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 362 LF 363
           +F
Sbjct: 553 MF 554



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 178/354 (50%), Gaps = 8/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P    Y+ ++   CR+G    ++ + E M A G       C  +T     +++ +C+
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-------CTLDTGNCNLVLNAICE 193

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +G VD+A  L  K+       ++V+YN+++ G C A  W + + L  EM+     PN+V+
Sbjct: 194 QGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN ++  LC+NG  +    +L  M + G  P+  +Y T++DG C  G +  A E+   M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G K NV  Y+ ++ G C  +  + A  L SEM  K    D V +N L     +   V+
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           R  +L ++M  HG   D   Y T I+G CK G I EAV L +++     + +  +Y  ++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GLC +GR   A EL   + +     + VT+N +I+ LC  G +++A +L   M
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++    C  +  T+N L++  C+ G     + L E+M +        C P+ +
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG------CMPDVI 392

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+G CKEG +D+A  L   M      PN V+Y  ++ G C A  W +A+ L  +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  PN V+FN ++N LCK G +++A  LL+ M+  G  P+   Y+T++DG    G+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M + G   N   YS +     +   +   + ++  +    I+ D V+YN +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  + +RA   F  M  +G   +   Y   I GL   G   EA EL   L
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 6/260 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+V TY T+ING C+ G    A+ L + M++        CKPNTV+YT 
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG------CKPNTVSYTI 431

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GLC  G    A+EL  +M  +   PN VT+N+LI+  C      +A  L  +M+  G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+++S++ +++ L K GK +EA  LL +M+  G+ PN  +Y+++       GRVN+  
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F +++    + +   Y+ +I+  CK  E + A+  ++ M+S G  P+   Y  L  GL
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 246 FEIHQVERAFKLFDEMQRHG 265
                 + A +L  E+   G
Sbjct: 612 ASEGLAKEAQELLSELCSRG 631



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 3/275 (1%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           VV YN+++ G+C A    +            V PN  +F  ++  LC  G++ +A  +L+
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  P   +Y+ +++  C +G    +  +  +M + GC  +  + ++++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++ A+ L  ++   G + D+V YN +  GL    +     +L DEM R   A +   + 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I  LC+NG      E+   +       DIR Y  +IDG+CK G L++A E+   +P  
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  +VV YN ++  LC+  +  +A +L  +M  K
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC PN  T+NTLIN LC+ G    A+ L ++M  NG       C P+
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 495

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  ++A EL   M ++ I+PN + Y+S+          N+   +F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK  + D A      M+  G  PN   Y  L+ G    G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
               A+EL   + S G   KH +  + I+
Sbjct: 616 LAKEAQELLSELCSRGALRKHLMRHFGIV 644


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/386 (34%), Positives = 204/386 (52%), Gaps = 44/386 (11%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PN FTY  LI G    G   +A+ L EEM + NG  G     N V +TT++ GLC  G
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS-NGFEG-----NAVVHTTLMKGLCDAG 58

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            V +A E F  M  ++  P+V+TY +L+H  C A  ++EA+ +  EM+ +G  P+ V+F+
Sbjct: 59  RVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFS 117

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGV--------------------------------- 161
            +++ LCK G  ++A R+LE +IQ G+                                 
Sbjct: 118 TLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIA 177

Query: 162 ---RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               P   ++N +++GFC    ++ A +L   M   GC  NVF+++ILI G CK   +  
Sbjct: 178 KGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGE 237

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L  +M++ G  P+VV Y+T+  GL +  QV+ A++LF  M+R     +   +   ID
Sbjct: 238 AQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILID 297

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR-GVLI 337
           GLCK   I EA +L+  +R      DI  YN LIDGLCKS ++  A++LF+++P  GV  
Sbjct: 298 GLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSA 357

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
           A+ VTY+ + H   A G+M  A  +F
Sbjct: 358 ANAVTYSTLFHGYAALGRMADACRIF 383



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 187/357 (52%), Gaps = 10/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNVFT+  LI GLC+      A  L E+M  G       C PN VTY+T+I+GLCK+
Sbjct: 214 GCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGG------CSPNVVTYSTVINGLCKQ 267

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A ELF  M+  N  PNVVT+N LI G C A    EA+ L+  M + G  P+++++
Sbjct: 268 GQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 327

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRP-NAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           N +++ LCK+ ++DEA +L + + + GV   NA  Y+TL  G+   GR+  A  +F  + 
Sbjct: 328 NSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLV 387

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y+ LI  YCK       + L  EM SKG  P V   + +  GLFE +  E
Sbjct: 388 DKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTE 447

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL---RILKYELDIRAYN 309
           RA +LFD M   G   D   Y   ++G+ +     +A+ +   +   R  K+     A +
Sbjct: 448 RAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVD 507

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            L++ LC+ GR   A +L   +      A V +YN ++  L    + D+A  +F  M
Sbjct: 508 ALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAM 564



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 189/393 (48%), Gaps = 45/393 (11%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           C P+V TY  L++ LC+ G    A  +  EM A G       C P+TVT++T+IDGLCK 
Sbjct: 74  CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARG-------CAPDTVTFSTLIDGLCKF 126

Query: 74  GF------------------------------------VDKAKELFLKMKDENINPNVVT 97
           G                                     V+ A ++   +  +   P V+ 
Sbjct: 127 GSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N +I+GFC A D + A  L   M+++G  PNV +F +++  LCK  ++ EA +LLE M+
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 246

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  PN   Y+T+++G C  G+V+ A ELF  ME   C  NV +++ILI+G CK K IE
Sbjct: 247 TGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIE 306

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTF 276
            A  LY  M   G  PD++ YN+L  GL +  QV+ AF+LF  +   GV AA+   Y T 
Sbjct: 307 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTL 366

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
             G    G + +A  +F  L    +  D+  Y  LI   CK+ R     EL   +     
Sbjct: 367 FHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGF 426

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              V T + ++  L      ++A  LF  M A+
Sbjct: 427 PPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 459



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 140/321 (43%), Gaps = 43/321 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++R  GC P++ TYN+LI+GLC++     A  LF+ +         V   N V
Sbjct: 307 EARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESG-----VSAANAV 361

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+  G    G +  A  +F  + D+  +P++ TY SLI  +C  +   E   L  EM
Sbjct: 362 TYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEM 421

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG------- 174
             +G  P V + + ++  L +    + A +L + M   G   +A +YN +++G       
Sbjct: 422 ASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKH 481

Query: 175 -------------------------------FCLTGRVNRAEELFVSMESMGCKHNVFSY 203
                                           C  GR + A++L   M   G    V SY
Sbjct: 482 NKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSY 541

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + L++G  + +  + A  ++  M+S G  P++   N +   L    +V+ A++L   M +
Sbjct: 542 NGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSK 601

Query: 264 HGVAADTWAYRTFIDGLCKNG 284
            G   D     T I G CK+G
Sbjct: 602 LGCCPDIETCNTLIGGYCKSG 622



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 104/205 (50%), Gaps = 5/205 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG-NGEFGVVCKPNTV 61
           A  LF  +   GC  +   YN ++ G+ R      AL + E++ +  + +F     P++ 
Sbjct: 449 AIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKF----NPSSS 504

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
               +++ LC+ G  D AK+L  KM +      V +YN L+ G      W+EA  +F  M
Sbjct: 505 AVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAM 564

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P + + NV+++ LC   K+D+A  L++ M ++G  P+    NTL+ G+C +GR 
Sbjct: 565 VSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRA 624

Query: 182 NRAEELFVSMESMGCKHNVFSYSIL 206
           + A +L   M   G + N  ++ +L
Sbjct: 625 DLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 112/231 (48%), Gaps = 9/231 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P V T + ++ GL    HT  A+ LF+ MA         C  + + Y  +++G+ + 
Sbjct: 425 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARG------CTDDALIYNLVVEGMARA 478

Query: 74  GFVDKAK---ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
              +KA    E  +  +D   NP+    ++L+   C     ++AK L  +M ++G    V
Sbjct: 479 SKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAV 538

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            S+N +++ L +  + DEA+++ E M+  G  P     N ++   C   +V+ A EL   
Sbjct: 539 SSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQR 598

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           M  +GC  ++ + + LI GYCK+   + A  L  EM   G++P+   ++ L
Sbjct: 599 MSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + Y   I G    G +  A++L   ++   +E +   +  L+ GLC +GR+  A E FR+
Sbjct: 10  FTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRA 69

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +     DV+TY  ++HALC  GK D+A+ +  +M A+
Sbjct: 70  MAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMIAR 107


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 190/355 (53%), Gaps = 12/355 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           C PN+ T+NTLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           KEG ++ A E+  +M    + PNVV YN+++ G C A  W EA+ L  EM  +    + V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FN++++  C+NG +D    LLE M+  G  P+   Y T+++GFC  G ++ A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            S GCK N  SY+I++ G C       A  L S+M+ +G  P+ V +NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E+A +L  +M  +G + D  +Y T IDGL K G   EA+EL   +       +   Y+ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L + GR+    ++F ++    + +D V YN +I +LC   + D+A D F  M
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 183/362 (50%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  KL  FGCE ++ +YN ++ GLC          L +EM        V C PN V
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIV 252

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I  LC+ G  ++  E+  +M +    P++  Y ++I G C       A  +   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV +N ++  LC   +  EA  LL  M Q     +   +N L+D FC  G V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +R  EL   M S GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP+ V Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +   
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y+ +IDGL K+G+ + A EL   +    +  + + Y+ +  AL  +G+++K   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 362 LF 363
           +F
Sbjct: 553 MF 554



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 178/354 (50%), Gaps = 8/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P    Y+ ++   CR+G    ++ + E M A G       C  +T     +++ +C+
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-------CTLDTGNCNLVLNAICE 193

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +G VD+A  L  K+       ++V+YN+++ G C A  W + + L  EM+     PN+V+
Sbjct: 194 QGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN ++  LC+NG  +    +L  M + G  P+  +Y T++DG C  G +  A E+   M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G K NV  Y+ ++ G C  +  + A  L SEM  K    D V +N L     +   V+
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           R  +L ++M  HG   D   Y T I+G CK G I EAV L +++     + +  +Y  ++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GLC +GR   A EL   + +     + VT+N +I+ LC  G +++A +L   M
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++    C  +  T+N L++  C+ G     + L E+M +        C P+ +
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG------CMPDVI 392

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+G CKEG +D+A  L   M      PN V+Y  ++ G C A  W +A+ L  +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  PN V+FN ++N LCK G +++A  LL+ M+  G  P+   Y+T++DG    G+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M + G   N   YS +     +   +   + ++  +    I+ D V+YN +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  + +RA   F  M  +G   +   Y   I GL   G   EA EL   L
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 6/260 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+V TY T+ING C+ G    A+ L + M++        CKPNTV+YT 
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG------CKPNTVSYTI 431

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GLC  G    A+EL  +M  +   PN VT+N+LI+  C      +A  L  +M+  G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+++S++ +++ L K GK +EA  LL +M+  G+ PN  +Y+++       GRVN+  
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F +++    + +   Y+ +I+  CK  E + A+  ++ M+S G  P+   Y  L  GL
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 246 FEIHQVERAFKLFDEMQRHG 265
                 + A +L  E+   G
Sbjct: 612 ASEGLAKEAQELLSELCSRG 631



 Score =  122 bits (306), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 3/275 (1%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           VV YN+++ G+C A    +            V PN  +F  ++  LC  G++ +A  +L+
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  P   +Y+ +++  C +G    +  +  +M + GC  +  + ++++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++ A+ L  ++   G + D+V YN +  GL    +     +L DEM R   A +   + 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I  LC+NG      E+   +       DIR Y  +IDG+CK G L++A E+   +P  
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  +VV YN ++  LC+  +  +A +L  +M  K
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC PN  T+NTLIN LC+ G    A+ L ++M  NG       C P+
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 495

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  ++A EL   M ++ I+PN + Y+S+          N+   +F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK  + D A      M+  G  PN   Y  L+ G    G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 180 RVNRAEELFVSMESMG 195
               A+EL   + S G
Sbjct: 616 LAKEAQELLSELCSRG 631


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/355 (36%), Positives = 190/355 (53%), Gaps = 12/355 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           C PN+ T+NTLI  LCR G       LFE   E+     E G  C P+   Y TIIDG+C
Sbjct: 247 CAPNIVTFNTLIGYLCRNG-------LFERVHEVLAQMSEHG--CTPDIRMYATIIDGIC 297

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           KEG ++ A E+  +M    + PNVV YN+++ G C A  W EA+ L  EM  +    + V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FN++++  C+NG +D    LLE M+  G  P+   Y T+++GFC  G ++ A  L  SM
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            S GCK N  SY+I++ G C       A  L S+M+ +G  P+ V +NTL   L +   V
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E+A +L  +M  +G + D  +Y T IDGL K G   EA+EL   +       +   Y+ +
Sbjct: 478 EQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSI 537

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L + GR+    ++F ++    + +D V YN +I +LC   + D+A D F  M
Sbjct: 538 ACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYM 592



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/362 (31%), Positives = 183/362 (50%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  KL  FGCE ++ +YN ++ GLC          L +EM        V C PN V
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVR------VDCAPNIV 252

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I  LC+ G  ++  E+  +M +    P++  Y ++I G C       A  +   M
Sbjct: 253 TFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV +N ++  LC   +  EA  LL  M Q     +   +N L+D FC  G V
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLV 372

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +R  EL   M S GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP+ V Y  +
Sbjct: 373 DRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIV 432

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +   A +L  +M + G   +   + T I+ LCK G + +A+EL + + +   
Sbjct: 433 LKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGC 492

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y+ +IDGL K+G+ + A EL   +    +  + + Y+ +  AL  +G+++K   
Sbjct: 493 SPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQ 552

Query: 362 LF 363
           +F
Sbjct: 553 MF 554



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 178/354 (50%), Gaps = 8/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P    Y+ ++   CR+G    ++ + E M A G       C  +T     +++ +C+
Sbjct: 141 GCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG-------CTLDTGNCNLVLNAICE 193

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +G VD+A  L  K+       ++V+YN+++ G C A  W + + L  EM+     PN+V+
Sbjct: 194 QGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVT 253

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN ++  LC+NG  +    +L  M + G  P+  +Y T++DG C  G +  A E+   M 
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMP 313

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G K NV  Y+ ++ G C  +  + A  L SEM  K    D V +N L     +   V+
Sbjct: 314 SYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVD 373

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           R  +L ++M  HG   D   Y T I+G CK G I EAV L +++     + +  +Y  ++
Sbjct: 374 RVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVL 433

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GLC +GR   A EL   + +     + VT+N +I+ LC  G +++A +L   M
Sbjct: 434 KGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQM 487



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 143/295 (48%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++    C  +  T+N L++  C+ G     + L E+M +        C P+ +
Sbjct: 339 EAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHG------CMPDVI 392

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+G CKEG +D+A  L   M      PN V+Y  ++ G C A  W +A+ L  +M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  PN V+FN ++N LCK G +++A  LL+ M+  G  P+   Y+T++DG    G+ 
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M + G   N   YS +     +   +   + ++  +    I+ D V+YN +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  + +RA   F  M  +G   +   Y   I GL   G   EA EL   L
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSEL 627



 Score =  150 bits (380), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 139/260 (53%), Gaps = 6/260 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+V TY T+ING C+ G    A+ L + M++        CKPNTV+YT 
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCG------CKPNTVSYTI 431

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GLC  G    A+EL  +M  +   PN VT+N+LI+  C      +A  L  +M+  G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+++S++ +++ L K GK +EA  LL +M+  G+ PN  +Y+++       GRVN+  
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F +++    + +   Y+ +I+  CK  E + A+  ++ M+S G  P+   Y  L  GL
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611

Query: 246 FEIHQVERAFKLFDEMQRHG 265
                 + A +L  E+   G
Sbjct: 612 ASEGLAKEAQELLSELCSRG 631



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 133/275 (48%), Gaps = 3/275 (1%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           VV YN+++ G+C A    +            V PN  +F  ++  LC  G++ +A  +L+
Sbjct: 79  VVAYNAMVAGYCRAG---QLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  P   +Y+ +++  C +G    +  +  +M + GC  +  + ++++N  C+  
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++ A+ L  ++   G + D+V YN +  GL    +     +L DEM R   A +   + 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I  LC+NG      E+   +       DIR Y  +IDG+CK G L++A E+   +P  
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  +VV YN ++  LC+  +  +A +L  +M  K
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQK 350



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC PN  T+NTLIN LC+ G    A+ L ++M  NG       C P+
Sbjct: 443 VDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 495

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  ++A EL   M ++ I+PN + Y+S+          N+   +F 
Sbjct: 496 LISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFD 555

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK  + D A      M+  G  PN   Y  L+ G    G
Sbjct: 556 NIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEG 615

Query: 180 RVNRAEELFVSMESMG 195
               A+EL   + S G
Sbjct: 616 LAKEAQELLSELCSRG 631


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/388 (34%), Positives = 200/388 (51%), Gaps = 34/388 (8%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN----------- 49
           +EA ALF++++  GC P+V TYN+LI+G  + G       L  EM               
Sbjct: 217 VEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNAL 276

Query: 50  ----GEFGVVCKP--------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                +FG + K               N VT++T +D  CKEG V +A +LF +M+   +
Sbjct: 277 INCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGM 336

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            PN  TY SL+ G C A   ++A  L  EM+ QG+ PNVV++ V+++ LCK GK+ EA  
Sbjct: 337 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADN 396

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +L LM + GV+ N  +Y TL+ G  +     RA +L   M++ G + +V  Y  LI G C
Sbjct: 397 VLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLC 456

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K+++++ A SL  +M   G++P+ VIY T+   LF+  +   A  L  ++   G   +  
Sbjct: 457 KDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVV 516

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   IDGLCK G I EA+  F  +R L  + +++AY  LIDG CK G L  A  L   +
Sbjct: 517 TYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEM 576

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  D V Y  +I     DG M +A
Sbjct: 577 IDKGMSLDKVVYTSLI-----DGYMKQA 599



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++RV G  PN FTY +L++G C+ G    A+ L +EM +     G+V  PN V
Sbjct: 323 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ----GLV--PNVV 376

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGLCKEG V +A  +   M+   +  N + Y +LIHG    N+   A  L  +M
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ +V  +  ++  LCK+ K+DEA  LL  M   G+RPN  +Y T+MD     G+ 
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   +   G + NV +Y  LI+G CK   I  A+S +++M   G+ P+V  Y  L
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +I  + +A  L +EM   G++ D   Y + IDG  K   + +A  L   +     
Sbjct: 557 IDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGL 616

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LD+  Y C I G C    ++ A  +   +    +  D   YN +I      G M++A  
Sbjct: 617 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASS 676

Query: 362 LFLDMEA 368
           L  +ME+
Sbjct: 677 LQNEMES 683



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 178/358 (49%), Gaps = 10/358 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     ++R     PN  T N ++  L R     +   LF+          ++  PN  
Sbjct: 152 DAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFD----------LLPVPNVF 201

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID LCKEG + +A+ LF++MK    +P+VVTYNSLI G+    D  E + L  EM
Sbjct: 202 TFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEM 261

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   +VV++N ++N   K G+M++A      M + GV  N   ++T +D FC  G V
Sbjct: 262 RKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLV 321

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M   G   N F+Y+ L++G CK   ++ A+ L  EM+ +G+ P+VV Y  +
Sbjct: 322 QEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 381

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V  A  +   M+R GV A+   Y T I G   N     A++L   ++    
Sbjct: 382 VDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGM 441

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ELD+  Y  LI GLCK  ++  A  L   +    L  + V Y  ++ AL   GK  +A
Sbjct: 442 ELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEA 499



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 4/305 (1%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++  L   G +D A     +++   + PN  T N ++         N    L   + D 
Sbjct: 139 TLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLA----RNRQGGLVRRLFDL 194

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
              PNV +FN++++ LCK G++ EA  L   M  +G  P+   YN+L+DG+   G +   
Sbjct: 195 LPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEV 254

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           E+L   M   GC  +V +Y+ LIN + K   +E A S + EM  +G+  +VV ++T    
Sbjct: 255 EQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDA 314

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   V+ A KLF +M+  G+  + + Y + +DG CK G + +A+ L   +       +
Sbjct: 315 FCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPN 374

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  ++DGLCK G++  A  +   + RG + A+ + Y  +IH    +   ++A DL  
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434

Query: 365 DMEAK 369
            M+ K
Sbjct: 435 QMKNK 439



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 135/275 (49%), Gaps = 41/275 (14%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+VV  + +++ L  +G +D+A R L  + Q+ V PN    N ++    L    NR   L
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHIL----LRLARNRQGGL 187

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG--- 244
              +  +    NVF+++I+I+  CK  E+  A +L+  M + G  PDVV YN+L  G   
Sbjct: 188 VRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 247

Query: 245 ---LFEIHQV-----------------------------ERAFKLFDEMQRHGVAADTWA 272
              L E+ Q+                             E+A+  F EM+R GV A+   
Sbjct: 248 CGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVT 307

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + TF+D  CK G + EA++LF  +R+     +   Y  L+DG CK+GRL  A  L   + 
Sbjct: 308 FSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 367

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              L+ +VVTY +M+  LC +GK+ +A ++   ME
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLME 402



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 6/193 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  K+   G +PNV TY  LI+GLC+ G    A++ F +M     E G+   PN  
Sbjct: 498 EAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMR----ELGL--DPNVQ 551

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +IDG CK G ++KA  L  +M D+ ++ + V Y SLI G+    +  +A  L  +M
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+Q ++  +   ++  C    M EA  +L  MI  G+ P+  VYN L+  +   G +
Sbjct: 612 IESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671

Query: 182 NRAEELFVSMESM 194
             A  L   MES+
Sbjct: 672 EEASSLQNEMESV 684


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 118/360 (32%), Positives = 195/360 (54%), Gaps = 6/360 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F ++   GC PNV TYNTLI+  C+ G    A  L + M++         +PN ++Y  I
Sbjct: 33  FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG------MQPNLISYNVI 86

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I+GLC+EG + +A E+  +M  +   P+ VTYN+L++G+C   ++++A  +  EM+  GV
Sbjct: 87  INGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 146

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            P+VV++  ++N +CK   ++ A    + M   G+RPN   Y TL+DGF   G +N A  
Sbjct: 147 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYR 206

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +   M   G   +V +Y+  I+G+C  + +E AL +  EM+ KG+ PDVV Y+T+  G  
Sbjct: 207 ILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFC 266

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              +++RAF++  EM   GV+ D   Y + I GLC+   + EA +L + +  +    D  
Sbjct: 267 RKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEF 326

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y  LI+  C  G L  A  L   +     + D VTY+++I+ L    +  +A+ L   +
Sbjct: 327 TYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKL 386



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 189/380 (49%), Gaps = 21/380 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G +PN+ +YN +INGLCR G    A  + EEM    G  G    P+ V
Sbjct: 63  EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEM----GYKGFT--PDEV 116

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++G CKEG   +A  +  +M    ++P+VVTY +LI+  C A + N A   F +M
Sbjct: 117 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 176

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN  ++  +++   + G ++EA R+L  M + G  P+   YN  + G C+  R+
Sbjct: 177 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERM 236

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M   G   +V SYS +I+G+C+  E++ A  +  EM+ KG+ PD V Y++L
Sbjct: 237 EEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSL 296

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL E+ ++  A  L  EM   G+  D + Y T I+  C  G + +A+ L   +    +
Sbjct: 297 IQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGF 356

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH------------- 348
             D   Y+ LI+GL K  R + A  L   L     +   VTY+ +I              
Sbjct: 357 LPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVAL 416

Query: 349 --ALCADGKMDKARDLFLDM 366
               C  G M +A  +F  M
Sbjct: 417 IKGFCMKGLMHEADRVFESM 436



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 191/367 (52%), Gaps = 21/367 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TY  LIN +C+  +   A+  F++M           +PN  TYTT+IDG  ++
Sbjct: 145 GVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG------LRPNERTYTTLIDGFSRQ 198

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A  +  +M +   +P+VVTYN+ IHG C      EA  +  EM+++G+ P+VVS+
Sbjct: 199 GLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSY 258

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I++  C+ G++D A ++ + M++ GV P+A  Y++L+ G C   R+  A +L   M  
Sbjct: 259 STIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLD 318

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           MG   + F+Y+ LIN YC   ++  AL L+ EM+ KG  PD V Y+ L  GL +  +   
Sbjct: 319 MGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTRE 378

Query: 254 A----FKL-FDEMQRHGVAADTW----------AYRTFIDGLCKNGYIVEAVELFRTLRI 298
           A    FKL ++E     V  DT           +    I G C  G + EA  +F ++  
Sbjct: 379 AKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 438

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             ++     YN +I G C+ G L  A+ L++ +     +   VT   +I AL  +G  ++
Sbjct: 439 RNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEE 498

Query: 359 ARDLFLD 365
             ++  D
Sbjct: 499 MSEVIGD 505



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/310 (32%), Positives = 162/310 (52%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            PN  TY  +I G C  G + K    F +M+     PNVVTYN+LI  +C     +EA  
Sbjct: 7   SPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFG 66

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   M  +G+QPN++S+NVI+N LC+ G M EA  +LE M   G  P+   YNTL++G+C
Sbjct: 67  LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G  ++A  +   M   G   +V +Y+ LIN  CK + +  A+  + +M  +G++P+  
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y TL  G      +  A+++ +EM   G +     Y  FI G C    + EA+ + + +
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEM 246

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+ +Y+ +I G C+ G L  A+++ + +    +  D VTY+ +I  LC   ++
Sbjct: 247 VEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRL 306

Query: 357 DKARDLFLDM 366
            +A DL  +M
Sbjct: 307 TEACDLSQEM 316



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 146/279 (52%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           ++PNV TYN LI GFC   +  +    F EM   G  PNVV++N +++  CK G++DEA 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            LL+ M   G++PN   YN +++G C  G +  A E+   M   G   +  +Y+ L+NGY
Sbjct: 66  GLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGY 125

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK      AL +++EM+  G+ P VV Y  L   + +   + RA + FD+M+  G+  + 
Sbjct: 126 CKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNE 185

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y T IDG  + G + EA  +   +    +   +  YN  I G C   R++ A  + + 
Sbjct: 186 RTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    L  DVV+Y+ +I   C  G++D+A  +  +M  K
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEK 284



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 125/249 (50%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   V PNV ++N+++   C  G++ +       M + G  PN   YNTL+D +C  GR
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  L  SM S G + N+ SY+++ING C+   ++ A  +  EM  KG  PD V YNT
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +     +A  +  EM R+GV+     Y   I+ +CK   +  A+E F  +RI  
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              + R Y  LIDG  + G L  A+ +   +        VVTYN  IH  C   +M++A 
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 361 DLFLDMEAK 369
            +  +M  K
Sbjct: 241 GVVQEMVEK 249



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 6/81 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +     +P    YN +I+G CR G+   A NL++EM +     G V  P+TV
Sbjct: 428 EADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHS----GFV--PHTV 481

Query: 62  TYTTIIDGLCKEGFVDKAKEL 82
           T  T+I  L KEG  ++  E+
Sbjct: 482 TVITLIKALFKEGMNEEMSEV 502


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/363 (35%), Positives = 192/363 (52%), Gaps = 21/363 (5%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P V TY  +++GLC+   T  A+ L +EM +        C PN  TY  I++GLC+E 
Sbjct: 108 CLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKG------CSPNIYTYNVIVEGLCEER 161

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+AK++  +M      P+VVTYNS I G C  +  +EA+     M    V P+VVS+ 
Sbjct: 162 KLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYT 218

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N LCK+G +D ASR+L+ M   G  P+   Y++L+DGFC  G V RA  L  SM  +
Sbjct: 219 TVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 278

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC+ N+ +Y+ L+    +   I  A  +  EM  +G  PDVV YN    GL +  +V++A
Sbjct: 279 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKA 338

Query: 255 FKLFDEMQRHGVAADTWAYRTFI----------DGLCKNGYIVEAVELFRTLRILKY-EL 303
             +FD M   G   +  +Y   I          DGLCK G   EA  LF  +   K  E 
Sbjct: 339 KAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEP 398

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D+  YN ++D  CK  ++  A ++ + +       +VVT+NI++H LC D ++  A  + 
Sbjct: 399 DVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN-CCNVVTWNILVHGLCVDDRLSDAETML 457

Query: 364 LDM 366
           L M
Sbjct: 458 LTM 460



 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/379 (34%), Positives = 194/379 (51%), Gaps = 20/379 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  GC P+   YN LI+G  +      A     EM   +      C P  V
Sbjct: 60  KARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH------CLPTVV 113

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT I+DGLCK      A +L  +M+D+  +PN+ TYN ++ G C     +EAK +  EM
Sbjct: 114 TYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEM 173

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+VV++N  +  LCK  ++DEA + L  M    V P+   Y T+++G C +G +
Sbjct: 174 AVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDL 230

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M + GC  +V +YS LI+G+CK  E+E A+ L   ML  G +P++V YN+L
Sbjct: 231 DSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSL 290

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR------- 294
              L  +  + +A  +  EM+R G   D  +Y   IDGLCK   + +A  +F        
Sbjct: 291 LGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGC 350

Query: 295 TLRILKYEL---DIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHAL 350
           T     Y +   DI  Y  L+DGLCK GR   A  LF + L   +   DV  YN+M+ + 
Sbjct: 351 TPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSH 410

Query: 351 CADGKMDKARDLFLDMEAK 369
           C   ++DKA  +   M  K
Sbjct: 411 CKRRQIDKALQIHKQMLEK 429



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/400 (31%), Positives = 197/400 (49%), Gaps = 40/400 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA---------NGNGEF 52
           +A  L  ++R  GC PN++TYN ++ GLC       A  + EEMA           N   
Sbjct: 130 DAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFI 189

Query: 53  GVVCK-----------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
             +CK                 P+ V+YTT+I+GLCK G +D A  +   M +    P+V
Sbjct: 190 KGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDV 249

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           VTY+SLI GFC   +   A  L   M+  G +PN+V++N ++  L + G + +A  +L  
Sbjct: 250 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI-------- 207
           M + G  P+   YN  +DG C   RV +A+ +F  M   GC  N  SYS+LI        
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369

Query: 208 --NGYCKNKEIEGALSLYSEMLSKGI-KPDVVIYNTLFIGLFEIHQVERAFKLFDEM-QR 263
             +G CK    + A +L+S++L + I +PDV  YN +     +  Q+++A ++  +M ++
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEK 429

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
           +     TW     + GLC +  + +A  +  T+    +  D   Y  L+D +CK G+   
Sbjct: 430 NCCNVVTW--NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 487

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           A ELF    +G  + DVVTY+ +I  L  +   ++A  LF
Sbjct: 488 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF 527



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 199/393 (50%), Gaps = 48/393 (12%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G E NVFTYN L+  L R      A  +F+EM + +      C+P+  T+  ++ GLC+
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKS------CQPDAFTFAILLRGLCR 54

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              ++KA++L  +MK+    P+   YN+LI G+  A D+ +A     EM+     P VV+
Sbjct: 55  SNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVT 114

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  I++ LCK  +  +A +LL+ M   G  PN + YN +++G C   +++ A+++   M 
Sbjct: 115 YTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMA 174

Query: 193 SMG---------------CK-----------------HNVFSYSILINGYCKNKEIEGAL 220
             G               CK                  +V SY+ +ING CK+ +++ A 
Sbjct: 175 VRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSAS 234

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +   M ++G  PDVV Y++L  G  +  +VERA  L D M + G   +  AY + +  L
Sbjct: 235 RMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGAL 294

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRG----- 334
            + G+I +A ++   +    +  D+ +YN  IDGLCK+ R+K A  +F R + RG     
Sbjct: 295 HRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNA 354

Query: 335 ----VLIADVVTYNIMIHALCADGKMDKARDLF 363
               +LI D++ Y +++  LC  G+ D+A  LF
Sbjct: 355 SSYSMLIVDILLYTVLLDGLCKGGRFDEACALF 387



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 158/311 (50%), Gaps = 3/311 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  TY  ++  L +E   DKA  +F +M D++  P+  T+  L+ G C +N   +A+ L 
Sbjct: 6   NVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLL 65

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M + G  P+   +N +++   K     +A + L  M++    P    Y  ++DG C  
Sbjct: 66  GRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKA 125

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            R   A +L   M   GC  N+++Y++++ G C+ ++++ A  +  EM  +G  PDVV Y
Sbjct: 126 ERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+   GL +  +V+ A K    + R  V  D  +Y T I+GLCK+G +  A  +   +  
Sbjct: 186 NSFIKGLCKCDRVDEARKF---LARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+  Y+ LIDG CK G ++ A  L  S+ +     ++V YN ++ AL   G + K
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGK 302

Query: 359 ARDLFLDMEAK 369
           A D+ ++ME +
Sbjct: 303 AEDMLVEMERR 313



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 152/294 (51%), Gaps = 18/294 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V TY++LI+G C+ G    A+ L + M        + C+PN V Y +++  L + 
Sbjct: 244 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSM------LKLGCRPNMVAYNSLLGALHRL 297

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + KA+++ ++M+     P+VV+YN+ I G C A    +AK +F  M+++G  PN  S+
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 134 N----------VIMNELCKNGKMDEASRLLELMIQIGV-RPNAFVYNTLMDGFCLTGRVN 182
           +          V+++ LCK G+ DEA  L   ++   +  P+ F YN ++D  C   +++
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 417

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A ++   M    C  NV +++IL++G C +  +  A ++   M+ +G  PD V Y TL 
Sbjct: 418 KALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLV 476

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             + +  +   A +LF+E  + G   D   Y   I GL       EA  LF  L
Sbjct: 477 DAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL 530



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 18/244 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  + +++   G  P+V +YN  I+GLC+      A  +F+ M     E G  C PN  
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMV----ERG--CTPNAS 355

Query: 62  TY----------TTIIDGLCKEGFVDKAKELFLKMKDENI-NPNVVTYNSLIHGFCYAND 110
           +Y          T ++DGLCK G  D+A  LF K+ DE I  P+V  YN ++   C    
Sbjct: 356 SYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQ 415

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            ++A  +  +M+++    NVV++N++++ LC + ++ +A  +L  M+  G  P+   Y T
Sbjct: 416 IDKALQIHKQMLEKNCC-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGT 474

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+D  C  G+   A ELF      GC  +V +YS LI G       E A  L+++++ + 
Sbjct: 475 LVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERR 534

Query: 231 IKPD 234
             PD
Sbjct: 535 WVPD 538



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 99/208 (47%)

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
           +G   N F YN L+       R ++A  +F  M    C+ + F+++IL+ G C++ ++E 
Sbjct: 1   MGYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEK 60

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L   M   G  PD  IYN L  G  +     +AFK   EM ++        Y   +D
Sbjct: 61  ARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVD 120

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GLCK     +AV+L   +R      +I  YN +++GLC+  +L  A ++   +       
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           DVVTYN  I  LC   ++D+AR     M
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARM 208



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 33/170 (19%)

Query: 2   EAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG---------- 50
           EA ALF K L    CEP+VF YN +++  C+      AL + ++M   N           
Sbjct: 382 EACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILV 441

Query: 51  --------------------EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                               + G +  P+ VTY T++D +CK G    A ELF +     
Sbjct: 442 HGLCVDDRLSDAETMLLTMVDEGFI--PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGG 499

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
             P+VVTY++LI G  + N   EA  LF +++++   P+  +  ++  +L
Sbjct: 500 CVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKL 549


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 199/367 (54%), Gaps = 7/367 (1%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +E    FM K+   G  PNV TYNTLI+  C+      A+ L   MA G    GV    N
Sbjct: 223 LEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG----GVAA--N 276

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y ++I+GLC +G + +  EL  +M+ + + P+ VTYN+L++GFC   + ++   L  
Sbjct: 277 LISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLS 336

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +G+ PNVV++  ++N +CK G +  A  + + M   G+RPN   Y TL+DGFC  G
Sbjct: 337 EMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKG 396

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +N A ++   M   G   +V +Y+ L++GYC    ++ A+ +   M+ +G+ PDVV Y+
Sbjct: 397 LMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYS 456

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T+  G     ++ +AF++ +EM   GV  DT  Y + I GLC    +VEA +LFR +   
Sbjct: 457 TVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRR 516

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   Y  LI+  C  G L  A  L   + +   + D VTY+++I+ L    +   A
Sbjct: 517 GLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVA 576

Query: 360 RDLFLDM 366
           + L L +
Sbjct: 577 KRLLLKL 583



 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 129/380 (33%), Positives = 196/380 (51%), Gaps = 21/380 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   + V G   N+ +YN++INGLC  G       L EEM  G G       P+ V
Sbjct: 260 EAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM-RGKG-----LVPDEV 313

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++G CKEG + +   L  +M  + ++PNVVTY +LI+  C A + + A  +F +M
Sbjct: 314 TYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQM 373

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN  ++  +++  C+ G M+EA ++L  MI  G  P+   YN L+ G+C  GRV
Sbjct: 374 RVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRV 433

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M   G   +V SYS +I G+C+ +E+  A  +  EM+ KG+ PD V Y++L
Sbjct: 434 QEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSL 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++  AF LF EM R G+  D   Y + I+  C +G + +A+ L   +    +
Sbjct: 494 IQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGF 553

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH------------- 348
             D   Y+ LI+GL K  R K+A  L   L     + D VTYN +I              
Sbjct: 554 LPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGL 613

Query: 349 --ALCADGKMDKARDLFLDM 366
               C  G M++A  +F  M
Sbjct: 614 VKGFCMKGLMNEADRVFKTM 633



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 191/381 (50%), Gaps = 21/381 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L  ++R  G  P+  TYNTL+NG C+ G+    L L  EM  G G       PN V
Sbjct: 295 EVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMV-GKG-----LSPNVV 348

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+ +CK G + +A E+F +M+   + PN  TY +LI GFC     NEA  +  EM
Sbjct: 349 TYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEM 408

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++N +++  C  G++ EA  +L  M++ G+ P+   Y+T++ GFC    +
Sbjct: 409 IVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCREREL 468

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++   M   G   +  +YS LI G C  +++  A  L+ EM+ +G+ PD V Y +L
Sbjct: 469 GKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSL 528

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                   ++ +A +L DEM + G   D   Y   I+GL K      A  L   L   + 
Sbjct: 529 INAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEES 588

Query: 302 ELDIRAYNCLID---------------GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             D   YN LI+               G C  G +  A  +F+++ +     +   YN+M
Sbjct: 589 VPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLM 648

Query: 347 IHALCADGKMDKARDLFLDME 367
           IH     G + KA +L++++E
Sbjct: 649 IHGHSRGGNVHKAYNLYMELE 669



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 192/368 (52%), Gaps = 21/368 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV TY TLIN +C+ G+   A+ +F++M           +PN  TYTT+IDG C++
Sbjct: 342 GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRG------LRPNERTYTTLIDGFCQK 395

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A ++  +M     +P+VVTYN+L+HG+C+     EA  +   M+++G+ P+VVS+
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++   C+  ++ +A ++ E M++ GV P+   Y++L+ G CL  ++  A +LF  M  
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMR 515

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ LIN YC + E+  AL L+ EM+ +G  PD V Y+ L  GL +  + + 
Sbjct: 516 RGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKV 575

Query: 254 AFKLFDEMQRHGVAADTWAYRTFID---------------GLCKNGYIVEAVELFRTLRI 298
           A +L  ++       D   Y T I+               G C  G + EA  +F+T+  
Sbjct: 576 AKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQ 635

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             ++ +   YN +I G  + G +  A+ L+  L         V    ++ AL  +G  D+
Sbjct: 636 RNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDE 695

Query: 359 ARDLFLDM 366
              L  ++
Sbjct: 696 LSRLLQNI 703



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 179/358 (50%), Gaps = 11/358 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIV-----ALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           G  P V +YN +++ L R   +       A  +F +M   NG       PN  TY  II 
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVR-NG-----VSPNVYTYNVIIR 215

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G+  +G ++K      KM+ E I+PNVVTYN+LI   C      EA  L   M   GV  
Sbjct: 216 GVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAA 275

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N++S+N ++N LC  G+M E   L+E M   G+ P+   YNTL++GFC  G +++   L 
Sbjct: 276 NLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLL 335

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G   NV +Y+ LIN  CK   +  A+ ++ +M  +G++P+   Y TL  G  + 
Sbjct: 336 SEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQK 395

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             +  A+K+  EM   G +     Y   + G C  G + EAV + R +       D+ +Y
Sbjct: 396 GLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSY 455

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + +I G C+   L  A+++   +    ++ D VTY+ +I  LC   K+ +A DLF +M
Sbjct: 456 STVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREM 513



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 179/353 (50%), Gaps = 11/353 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV----- 76
           ++ ++  L R G    AL L   +AN +G       P  ++Y  ++D L +         
Sbjct: 135 FDLVVKSLSRLGFVPKALTLLH-LANRHG-----FAPTVLSYNAVLDALLRRSSSNHRDY 188

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A+ +F  M    ++PNV TYN +I G     D  +      +M  +G+ PNVV++N +
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK  K+ EA  LL  M   GV  N   YN++++G C  GR++   EL   M   G 
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +Y+ L+NG+CK   +   L L SEM+ KG+ P+VV Y TL   + +   + RA +
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +FD+M+  G+  +   Y T IDG C+ G + EA ++   + +  +   +  YN L+ G C
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             GR++ A  + R +    L  DVV+Y+ +I   C + ++ KA  +  +M  K
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEK 481



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 170/354 (48%), Gaps = 17/354 (4%)

Query: 29  LCRTGHTIVALNLFEEMANGNGE---------FGVVCKP--NTVTYTTIIDGLCKEGFVD 77
           L RT H++ A +L   + +  G          F +   P  ++  +  ++  L + GFV 
Sbjct: 91  LYRTAHSLAA-DLAATLPDPTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVP 149

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYAN-----DWNEAKCLFIEMMDQGVQPNVVS 132
           KA  L          P V++YN+++      +     D+++A+ +F +M+  GV PNV +
Sbjct: 150 KALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYT 209

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +NVI+  +   G +++    +  M + G+ PN   YNTL+D  C   +V  A  L  +M 
Sbjct: 210 YNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA 269

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   N+ SY+ +ING C    +     L  EM  KG+ PD V YNTL  G  +   + 
Sbjct: 270 VGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLH 329

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +   L  EM   G++ +   Y T I+ +CK G +  AVE+F  +R+     + R Y  LI
Sbjct: 330 QGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLI 389

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           DG C+ G +  A+++   +        VVTYN ++H  C  G++ +A  +   M
Sbjct: 390 DGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGM 443



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 170/354 (48%), Gaps = 23/354 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++ V G  P+V TYN L++G C  G    A+ +   M     E G+   P+ V
Sbjct: 400 EAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMV----ERGL--PPDVV 453

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+T+I G C+E  + KA ++  +M ++ + P+ VTY+SLI G C      EA  LF EM
Sbjct: 454 SYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREM 513

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ P+ V++  ++N  C +G++ +A RL + M+Q G  P+   Y+ L++G     R 
Sbjct: 514 MRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKART 573

Query: 182 NRAEELFVSM---ESM-----------GCKHNVF-SYSILINGYCKNKEIEGALSLYSEM 226
             A+ L + +   ES+            C +N F S   L+ G+C    +  A  ++  M
Sbjct: 574 KVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTM 633

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L +  KP+  IYN +  G      V +A+ L+ E++    A  T A    +  L + G  
Sbjct: 634 LQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMN 693

Query: 287 VEAVELFRT-LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            E   L +  LR  +   D +    L++   K G +     +   + +  L+ D
Sbjct: 694 DELSRLLQNILRSCRLN-DAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 127/274 (46%), Gaps = 36/274 (13%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++   G  P+  TY +LIN  C  G    AL L +EM     + G +  P+ 
Sbjct: 504 VEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMV----QRGFL--PDN 557

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +I+GL K+     AK L LK+  E   P+ VTYN+LI   C  N++       +E
Sbjct: 558 VTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNNEFKS-----VE 611

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G               C  G M+EA R+ + M+Q   +PNA +YN ++ G    G 
Sbjct: 612 GLVKG--------------FCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGN 657

Query: 181 VNRAEELFVSMESMGCKHNVFS-YSILINGYCKNKEIEGALSLYSEMLSKGIKP----DV 235
           V++A  L++ +E     H+ F+ +++ +    K    EG     S +L   ++     D 
Sbjct: 658 VHKAYNLYMELE-----HSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDA 712

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            +   L    F+   ++    +  EM + G+  D
Sbjct: 713 KVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 186/353 (52%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V TY  L+   C+      A+ L +EM +        C P+ VTY  +++G+C+E
Sbjct: 196 GCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKG------CAPDIVTYNVVLNGICQE 249

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V+ A E    +      PN V+YN ++ G   A  W +A+ L  EM  +G  PNVV+F
Sbjct: 250 GRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC+ G ++ A  +LE M Q G  PN+  YN L+  FC   ++++A E    M S
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVS 369

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  ++ SY+ L+   C+N E++ A+ L  ++  KG  P ++ YNT+  GL +  + + 
Sbjct: 370 RGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKE 429

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L DEM   G+  D   Y T   GLC+   I EAV  F  ++ +        YN ++ 
Sbjct: 430 ALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILL 489

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK      A +LF  +     + +  TY I++  L  +G + +AR+LF  +
Sbjct: 490 GLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLVKEARELFAQL 542



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 175/351 (49%), Gaps = 9/351 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  YN ++ G C  G    A  L  +M           +P+  TY T+I GLC  G  
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---------VEPDAYTYNTLIRGLCGRGRT 182

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  +   M      P+VVTY  L+   C  + + +A  L  EM D+G  P++V++NV+
Sbjct: 183 SNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVV 242

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N +C+ G++++A   L+ +   G  PN   YN ++ G     R   AE+L   M   GC
Sbjct: 243 LNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC 302

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV ++++LI+  C+   +E A+ +  +M   G  P+ + YN L     +  ++ +A +
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             + M   G   D  +Y T +  LC+NG +  A+EL   L+       + +YN +IDGL 
Sbjct: 363 FVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLT 422

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           K+G+ K A EL   +    L  D++TY+ +   LC + ++++A   F  ++
Sbjct: 423 KAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQ 473



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 175/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GC P++ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV
Sbjct: 219 QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPS----YG--CEPNTV 272

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++ GL      + A++L  +M  +   PNVVT+N LI   C       A  +  +M
Sbjct: 273 SYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQM 332

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N +++  CK  K+ +A   +ELM+  G  P+   YNTL+   C  G V
Sbjct: 333 PQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEV 392

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L  EM SKG++PD++ Y+T+
Sbjct: 393 DVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTI 452

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E A + F ++Q  G+      Y   + GLCK      A++LF  +     
Sbjct: 453 ASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGC 512

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             +   Y  L++GL   G +K A ELF  L  RGV+
Sbjct: 513 MPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVV 548



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 158/341 (46%), Gaps = 12/341 (3%)

Query: 29  LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 88
           L R G    AL L + +A  N        P       +I  LC  G    A+ +      
Sbjct: 77  LVRRGELDDALRLVDSLAGLNPPSPAAVGP----CAALIKKLCASGRTADARRVLAAS-- 130

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
               P+V+ YN+++ G+C A   + A+ L  +M    V+P+  ++N ++  LC  G+   
Sbjct: 131 ---GPDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRTSN 184

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A  +LE M + G  P+   Y  L++  C      +A +L   M   GC  ++ +Y++++N
Sbjct: 185 ALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLN 244

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G C+   +E A+     + S G +P+ V YN +  GLF   + E A KL +EM   G   
Sbjct: 245 GICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPP 304

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           +   +   I  LC+ G +  A+E+   +       +  +YN L+   CK  ++  A E  
Sbjct: 305 NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +       D+V+YN ++ ALC +G++D A +L   ++ K
Sbjct: 365 ELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDK 405


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/346 (36%), Positives = 190/346 (54%), Gaps = 6/346 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N FTY  LI+GLC+ G    A +LF EM       G+  KP+  TY  +I+G  K   ++
Sbjct: 371 NTFTYYALIHGLCKIGDLEKAEDLFSEMT----MMGI--KPDIQTYNCLIEGYYKVQNME 424

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA EL +++K EN+  N     ++++G C+  D   A  LF EM+  G++PN+V +  I+
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV 484

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             L K G+ +EA ++L +M   G+ P+ F YNT++ GFC  G++   +   V M + G K
Sbjct: 485 KGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLK 544

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV++Y   I+GYC+  E++ A   + EML  GI P+ VI   L  G  +     +AF  
Sbjct: 545 PNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAK 604

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M   GV  D   +   I GL KNG + EA+ +F  L       D+  Y  LI  LCK
Sbjct: 605 FRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCK 664

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            G LK A+EL   + +  +  ++VTYN +I+ LC  G++ KAR+LF
Sbjct: 665 EGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELF 710



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 190/364 (52%), Gaps = 7/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++  +G +PN+  Y T++ GL + G    A+ +   M +          P+   
Sbjct: 461 ANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG------LSPDVFC 514

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I G CK G +++ K   ++M  + + PNV TY + IHG+C A +   A+  FIEM+
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEML 574

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D G+ PN V    +++  CK+G   +A      M+  GV P+   ++ L+ G    G++ 
Sbjct: 575 DSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQ 634

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +F  +   G   +VF+Y+ LI+  CK  +++ A  L+ +M  KGI P++V YN L 
Sbjct: 635 EAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALI 694

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL ++ ++ +A +LFD +   G+A ++  Y T I G CK+  + EA +LF  ++++   
Sbjct: 695 NGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVP 754

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y  LIDG CK+G  + A  LF  +     IA    +N +I      GK+ +A  L
Sbjct: 755 PDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-IASTPAFNALIDGFFKLGKLIEAYQL 813

Query: 363 FLDM 366
             DM
Sbjct: 814 VEDM 817



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E  ++  ++   G +P+   Y  LING  +      A  + EEM      F    K NT 
Sbjct: 320 EGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEM------FARKIKLNTF 373

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCK G ++KA++LF +M    I P++ TYN LI G+    +  +A  L IE+
Sbjct: 374 TYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEI 433

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + +  N      I+N LC  G +  A+ L + MI  G++PN  +Y T++ G    GR 
Sbjct: 434 KKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRF 493

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M+  G   +VF Y+ +I G+CK  ++E   S   EM++KG+KP+V  Y   
Sbjct: 494 EEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAF 553

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +++ A + F EM   G+A +       IDG CK+G   +A   FR +     
Sbjct: 554 IHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGV 613

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D++ ++ LI GL K+G+L+ A  +F  L    L+ DV TY  +I  LC +G +  A +
Sbjct: 614 LPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFE 673

Query: 362 LFLDM 366
           L  DM
Sbjct: 674 LHDDM 678



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 173/350 (49%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V+TY  LIN  CR G      ++  +M          C PN VTY+ +I GLC+ G V
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKG------CIPNLVTYSVVIAGLCRAGDV 283

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A EL   M ++ + P+   Y +LI GFC      E K +  EM   G++P+ V++  +
Sbjct: 284 DEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTAL 343

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N   K   +  A ++ E M    ++ N F Y  L+ G C  G + +AE+LF  M  MG 
Sbjct: 344 INGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K ++ +Y+ LI GY K + +E A  L  E+  + +  +  +   +  GL     + RA +
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF EM   G+  +   Y T + GL K G   EA+++   ++      D+  YN +I G C
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFC 523

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K+G+++        +    L  +V TY   IH  C  G+M  A   F++M
Sbjct: 524 KAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEM 573



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 170/312 (54%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  TYT +I+  C+ G V++ K +   M+++   PN+VTY+ +I G C A D +EA  L
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALEL 289

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M ++G+ P+   +  +++  C+  +  E   +L+ M  +G++P+   Y  L++GF  
Sbjct: 290 KRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVK 349

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              +  A ++   M +   K N F+Y  LI+G CK  ++E A  L+SEM   GIKPD+  
Sbjct: 350 QSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQT 409

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G +++  +E+A++L  E+++  + A+ +     ++GLC  G +  A ELF+ + 
Sbjct: 410 YNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMI 469

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +I  Y  ++ GL K GR + A ++   +    L  DV  YN +I   C  GKM+
Sbjct: 470 SWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKME 529

Query: 358 KARDLFLDMEAK 369
           + +   ++M AK
Sbjct: 530 EGKSYLVEMIAK 541



 Score =  145 bits (365), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 155/308 (50%), Gaps = 9/308 (2%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND----WNEAKCLF 118
           +  +ID   K+GF+++A  +FL  K       +   NSL       N     W   K + 
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
                  + P+V ++  ++N  C+ GK++E   +L  M + G  PN   Y+ ++ G C  
Sbjct: 226 -----GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRA 280

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G V+ A EL  SM + G   + + Y+ LI+G+C+ K      S+  EM + G+KPD V Y
Sbjct: 281 GDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAY 340

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L  G  +   +  AF++ +EM    +  +T+ Y   I GLCK G + +A +LF  + +
Sbjct: 341 TALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTM 400

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +  + DI+ YNCLI+G  K   ++ A+EL   + +  L A+      +++ LC  G + +
Sbjct: 401 MGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTR 460

Query: 359 ARDLFLDM 366
           A +LF +M
Sbjct: 461 ANELFQEM 468



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 180/399 (45%), Gaps = 58/399 (14%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  PN+ TYN LINGLC+ G    A  LF+    G  E G+    N+VTY+TII G CK 
Sbjct: 682  GINPNIVTYNALINGLCKLGEIAKARELFD----GIPEKGLA--RNSVTYSTIIAGYCKS 735

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              + +A +LF  MK   + P+   Y +LI G C A +  +A  LF+ M+++G+  +  +F
Sbjct: 736  ANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI-ASTPAF 794

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            N +++   K GK+ EA +L+E M+   + PN   Y  L++  C  G +  AE+LF+ M+ 
Sbjct: 795  NALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQK 854

Query: 194  MGCKHNVFSYSILINGY---CKNKEI----------------------------EG---- 218
                 NV +Y+ L++GY    +  E+                            EG    
Sbjct: 855  RNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIK 914

Query: 219  ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
            AL L  +MLS+G+     +Y  L   L + + +    K+ DE+++ G         T + 
Sbjct: 915  ALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVC 974

Query: 279  GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR--------LKIAWELFRS 330
               + G   EA+ +  ++        +R++  L++   ++G         L I  E  +S
Sbjct: 975  CFHRAGRTDEALRVLESM--------VRSFLNLLEFSVRNGNRGKSNGEMLSIILEGRKS 1026

Query: 331  LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L   +   DV  +  +  +    GK   A    L   AK
Sbjct: 1027 LSGDIQTLDVDLFKELSSSTSNQGKNASAMAPKLGSSAK 1065



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 129/262 (49%), Gaps = 7/262 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +++ G  P+ F Y  LI+G C+ G+T  AL+LF  M     E G+   P   
Sbjct: 740 EAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMV----EEGIASTP--- 792

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +IDG  K G + +A +L   M D +I PN VTY  LI   C   +  EA+ LF+EM
Sbjct: 793 AFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEM 852

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V PNV+++  +++   + G+  E   L + M+  G++P+   ++ ++D     G  
Sbjct: 853 QKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNW 912

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +L   M S G       Y+ILI+  CK+  +   L +  E+  +G K  +    TL
Sbjct: 913 IKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTL 972

Query: 242 FIGLFEIHQVERAFKLFDEMQR 263
                   + + A ++ + M R
Sbjct: 973 VCCFHRAGRTDEALRVLESMVR 994



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 62/119 (52%), Gaps = 1/119 (0%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++   K + E+     ++    +   ID   K G++ EAV +F   +  ++ + +   N 
Sbjct: 144 LDSIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNS 203

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   L K  R+++ W++++ +  G ++ DV TY  +I+A C  GK+++ + +  DME K
Sbjct: 204 LSKDLLKGNRVELFWKVYKGM-LGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEK 261


>gi|358347568|ref|XP_003637828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503763|gb|AES84966.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 529

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 188/354 (53%), Gaps = 27/354 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N  +Y TLINGLC+ G T  AL     +       G + +P+ V Y TIIDGLCK+
Sbjct: 112 GFKLNQVSYGTLINGLCKVGQTRAALEFLRRID------GKLVQPDVVMYNTIIDGLCKD 165

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V+ A  L+ +M  + I P+VVTYN+LI G C      +A  L  +M+ + + P V +F
Sbjct: 166 KLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTF 225

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  CK GKM EA  +  +M++  V+PN   YN+LMDG  L   V +A+ +F +M  
Sbjct: 226 SILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTMIK 285

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           M                     ++ A++L+ EM  K I PD+VIYN+L  GL +  +   
Sbjct: 286 M---------------------VDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPY 324

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K   EM   G   D + Y + +D LCKN ++ +A+EL   L+    +  +  YN LI+
Sbjct: 325 ALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILIN 384

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GLCKSGRLK A ++F  L       DV TYN MI   C  G  D+   +   M+
Sbjct: 385 GLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMK 438



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 189/380 (49%), Gaps = 22/380 (5%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTY 63
           +L  ++   G   N+ T + LIN   + G   ++ ++F   +  G G        + +T+
Sbjct: 33  SLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVFANILKKGYGS-------DAITF 85

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           TT+I GLC +G + KA     K+  +    N V+Y +LI+G C       A      +  
Sbjct: 86  TTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKVGQTRAALEFLRRIDG 145

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           + VQP+VV +N I++ LCK+  +++A  L   M+   + P+   YNTL+ G C+  ++  
Sbjct: 146 KLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKRICPSVVTYNTLICGLCIMAQLKD 205

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L   M        V+++SILI+ +CK  +++ A ++++ M+ + +KP++V YN+L  
Sbjct: 206 AIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKEDVKPNIVTYNSLMD 265

Query: 244 G------------LFE--IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G            +F   I  V+ A  LF+EM    +  D   Y + IDGLCK+G    A
Sbjct: 266 GHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCKSGRTPYA 325

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           ++    +       DI  YN L+D LCK+  +  A EL   L    +   V TYNI+I+ 
Sbjct: 326 LKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCTYNILING 385

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC  G++  A  +F D+  K
Sbjct: 386 LCKSGRLKDAEKVFEDLLVK 405



 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 143/278 (51%), Gaps = 21/278 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K+ +    P V+T++ LI+  C+ G    A N+F  M   +       KPN V
Sbjct: 205 DAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAKNVFAVMMKED------VKPNIV 258

Query: 62  TYTTIIDGLCKEGFVDKAKELF---LKMKDENIN-----------PNVVTYNSLIHGFCY 107
           TY +++DG      V KAK +F   +KM DE +N           P++V YNSLI G C 
Sbjct: 259 TYNSLMDGHHLVNVVKKAKSIFNTMIKMVDEAMNLFEEMHFKQIYPDMVIYNSLIDGLCK 318

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           +     A     EM  +G  P++ ++N +++ LCKN  +D+A  LL  +   G++P+   
Sbjct: 319 SGRTPYALKFIGEMHYRGQPPDIFTYNSLLDALCKNYHVDKAIELLTKLKDQGIQPSVCT 378

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YN L++G C +GR+  AE++F  +   G   +V++Y+ +I G+CK    +  L++ S+M 
Sbjct: 379 YNILINGLCKSGRLKDAEKVFEDLLVKGYNTDVYTYNAMIKGFCKKGLFDETLAMVSKMK 438

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
             G  PD      +   LF+  + ++A K F EM   G
Sbjct: 439 DSGCSPDAKNCEIIIRSLFDKGENDKAGK-FREMIVRG 475



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 136/281 (48%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           +  +N  P++  +  ++     AN ++    L  +M   G+  N+V+ ++++N   + G+
Sbjct: 3   LHHKNPTPSIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQ 62

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
              +  +   +++ G   +A  + TL+ G CL G +++A      + + G K N  SY  
Sbjct: 63  NALSFSVFANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGT 122

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING CK  +   AL     +  K ++PDVV+YNT+  GL +   V  AF L+ EM    
Sbjct: 123 LINGLCKVGQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAKR 182

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +      Y T I GLC    + +A+ L   + +      +  ++ LID  CK G++K A 
Sbjct: 183 ICPSVVTYNTLICGLCIMAQLKDAIGLLHKMILEDINPTVYTFSILIDAFCKEGKMKEAK 242

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +F  + +  +  ++VTYN ++        + KA+ +F  M
Sbjct: 243 NVFAVMMKEDVKPNIVTYNSLMDGHHLVNVVKKAKSIFNTM 283



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 86/171 (50%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++F +  ++    K       +SL+ +M   G+  ++V  + L     ++ Q   +F +F
Sbjct: 11  SIFEFGKILGSLVKANHYSIVVSLHRQMEFNGLASNLVTLSILINCYSQLGQNALSFSVF 70

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
             + + G  +D   + T I GLC  G I +A+     +    ++L+  +Y  LI+GLCK 
Sbjct: 71  ANILKKGYGSDAITFTTLIKGLCLKGEIHKALHFHDKVVAQGFKLNQVSYGTLINGLCKV 130

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G+ + A E  R +   ++  DVV YN +I  LC D  ++ A +L+ +M AK
Sbjct: 131 GQTRAALEFLRRIDGKLVQPDVVMYNTIIDGLCKDKLVNDAFNLYFEMVAK 181


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 120/332 (36%), Positives = 194/332 (58%), Gaps = 7/332 (2%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +  A LF  KL   G   +  +Y TLI+GLC+ G T  AL+L + +       G + + N
Sbjct: 23  IHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD------GKLVQLN 76

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y T+I G+CK+  V+ A +L+ +M  + I+PNVVTY++LI GF       +A  LF 
Sbjct: 77  AVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFN 136

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +++ + ++P+  +FN++++  CK+ KM E   +  +M++ G+ P+   YN+L+DG+ L  
Sbjct: 137 KIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGYRLVK 196

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            VN A+ +F +M   G   ++ SY+ILING+CK K+++ A++L++EM  K I P+VV YN
Sbjct: 197 EVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYN 256

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  GL +  ++  A +L D+M   GV  +   Y + ID L K   + +A+ L    +  
Sbjct: 257 SLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQ 316

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
             +  +  Y  LIDGLCK GRLK A  +F  L
Sbjct: 317 GIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 185/353 (52%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  T NTLI GLC  G    A    +++        +    + V+Y T+I GLCK 
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLV------ALGFHLDQVSYGTLIHGLCKV 55

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A +L  ++  + +  N V YN++I+G C     N+A  L+ EM+ +G+ PNVV++
Sbjct: 56  GETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 115

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + +++     GK+ +A  L   +I   ++P+ + +N L+DGFC   ++   + +F  M  
Sbjct: 116 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 175

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V +Y+ L++GY   KE+  A S+++ M   G+ PD+  YN L  G  +I +V++
Sbjct: 176 QGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK 235

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF+EM    +  +   Y + IDGL K+G I  A++L   +       +I  YN +ID
Sbjct: 236 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 295

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            L K+ ++  A  L        +   + TY I+I  LC  G++  AR++F D+
Sbjct: 296 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 74/245 (30%), Positives = 128/245 (52%)

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  PN ++ N ++  LC  G++ +A    + ++ +G   +   Y TL+ G C  G    A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +L   ++    + N   Y+ +I G CK+K +  A  LYSEM+SKGI P+VV Y+ L  G
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            F + +++ A  LF+++    +  D + +   +DG CK+  + E   +F  +       D
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  YN L+DG      +  A  +F ++ +G +  D+ +YNI+I+  C   K+DKA +LF 
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 365 DMEAK 369
           +M  K
Sbjct: 242 EMHCK 246


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 190/357 (53%), Gaps = 15/357 (4%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           YN +I GLC+      A+ +FE+M   N        P++ +Y  +IDGL K G ++ A+ 
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERN------VSPDSWSYGILIDGLAKAGKLNDARN 344

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           LF K+    + P+ V Y SLIHG C AN +++A+ LF +M  +G  P+ V++NV+++  C
Sbjct: 345 LFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASC 404

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G ++EA  L++ MI+ G  P+   YNT+MDG C + RV  A  LF  ME +GC  N  
Sbjct: 405 KRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRR 464

Query: 202 SYSILINGYCKNKEIEGA---------LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S++ +I G C+  +I+ A           L   M   G  PDVV Y+TL  GL  I +V+
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L ++M +           T I GLCK G I EA E+   +       D+  YN L+
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G C++G+ + A EL   +    L  +VVTY  ++  LC   ++ +A  +F  M++ 
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 641



 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 195/370 (52%), Gaps = 17/370 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G  P+V TYNT+++GLC++     AL LF EM        + C PN  
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMER------LGCTPNRR 464

Query: 62  TYTTIIDGLCKE---------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           ++ TII GLC++         G +D+A  L  +M D+   P+VVTY++LI G C     +
Sbjct: 465 SHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVD 524

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A+ L  +M+ +  +P VV+ N +++ LCK G++ EA  +L+ M+  G  P+   YNTL+
Sbjct: 525 DARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLV 584

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C  G+  RA EL   M + G   NV +Y+ L++G CK   +  A  ++++M S G  
Sbjct: 585 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 644

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P++  Y  L +G     QV+   KLF EM   G++ D   Y T    LCK+G    A+E+
Sbjct: 645 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 704

Query: 293 FRTLR-ILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            R  R  L+ E      Y   +DGL ++G++++A    R + RG  +        ++  L
Sbjct: 705 LREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 764

Query: 351 CADGKMDKAR 360
           C  G+  +AR
Sbjct: 765 CKSGQGGEAR 774



 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/371 (34%), Positives = 185/371 (49%), Gaps = 15/371 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF KL   G  P+   Y +LI+GLC       A  LF +M N  G     C P+ V
Sbjct: 341 DARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM-NRRG-----CPPSPV 394

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID  CK G +++A +L  KM ++   P+VVTYN+++ G C ++   EA  LF EM
Sbjct: 395 TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454

Query: 122 MDQGVQPNVVSFNVIM---------NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
              G  PN  S N I+         ++ C+ GK+DEA RLL+ M   G  P+   Y+TL+
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 514

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C   RV+ A  L   M    CK  V + + LI+G CK   I+ A  +   M+S G  
Sbjct: 515 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 574

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PDVV YNTL  G     Q ERA +L  +M   G+A +   Y   + GLCK   + EA  +
Sbjct: 575 PDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGV 634

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F  ++      ++  Y  LI G C +G++    +LF  +    +  D V Y  +   LC 
Sbjct: 635 FAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCK 694

Query: 353 DGKMDKARDLF 363
            G+  +A ++ 
Sbjct: 695 SGRSARALEIL 705



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/347 (31%), Positives = 163/347 (46%), Gaps = 54/347 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRT---------GHTIVALNLFEEMANGNGEF 52
           EA  LF ++   GC PN  ++NT+I GLC+          G    A  L + M + +G  
Sbjct: 446 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTD-DGHV 504

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
                P+ VTY+T+I GLC    VD A+ L   M      P VVT N+LIHG C A    
Sbjct: 505 -----PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIK 559

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           EA+ +   M+  G  P+VV++N +++  C+ G+ + A  LL  M+  G+ PN   Y  L+
Sbjct: 560 EAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALV 619

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C   R+  A  +F  M+S GC  N+F+Y+ LI G+C   +++G L L+ EM+  GI 
Sbjct: 620 SGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGIS 679

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA---YRTFIDG---------- 279
           PD V+Y TL   L +  +  RA ++  E  R  + ++ W    YR  +DG          
Sbjct: 680 PDHVVYGTLAAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMA 738

Query: 280 -------------------------LCKNGYIVEAVELFRTLRILKY 301
                                    LCK+G   EA  +   +  L Y
Sbjct: 739 LGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMDLAY 785



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 166/388 (42%), Gaps = 49/388 (12%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P    + ++I G C  G T  A+ +F  M   +        P    Y  +ID L K    
Sbjct: 8   PAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECH-------SPYPDVYNVLIDSLSKRQET 60

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           +  K++   M D    P+  T+ +++ G C A   +EA+ +  EM  + + P   + + +
Sbjct: 61  EAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFL 120

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME---- 192
            +ELC  G M+ A +LLE+M       N+  YN ++   C   RV+ A EL  +M     
Sbjct: 121 AHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKRI 176

Query: 193 --SMGCKHNVF--------------------------SYSILINGYCKNKEIEGALSLYS 224
             + G   +V                           + ++L+ G+C   +++ A  L  
Sbjct: 177 PLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLR 236

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ------RHGVAADTWAYRTFID 278
            M  +   PD V Y T+  GL +  +VE A +LF + +                Y   I 
Sbjct: 237 AMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVIL 296

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GLC+N  I EAV++F  +       D  +Y  LIDGL K+G+L  A  LF+ L    +  
Sbjct: 297 GLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTP 356

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
             V Y  +IH LC     D AR+LF DM
Sbjct: 357 STVAYTSLIHGLCMANSFDDARELFADM 384



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 8/282 (2%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M  + I P  + + S+I G+C      EA  +F  +M++   P    +NV+++ L K  +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIF-SLMEECHSPYPDVYNVLIDSLSKRQE 59

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            +   +++++M+  G  P++F + T++ G C  G+++ AE +   M S        + S 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L +  C    +E A  L   M       +   YN + + L +  +V+ A +L   M    
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVA----NSSAYNIVVVALCKAARVDDALELARTMSEKR 175

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +     +  + + GL  +G I EA++++R  R    E  +   N L++G C  G++  A 
Sbjct: 176 IPLAAGSLDSVLVGLMDSGRIDEALQVYRENR---REPCLVTLNVLLEGFCSRGQVDKAR 232

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           EL R++P      D V+Y  ++  LC  G++++A  LF D E
Sbjct: 233 ELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRE 274



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 40/214 (18%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M Q G+ P   ++ +++ G+C  GR   A ++F  ME     H+ +              
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEEC---HSPY-------------- 43

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
                            PDV  YN L   L +  + E   K+   M   G   D++ + T
Sbjct: 44  -----------------PDV--YNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTT 84

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            + GLCK G + EA  +   +R           + L   LC  G ++ A++L   +P   
Sbjct: 85  ILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP--- 141

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +A+   YNI++ ALC   ++D A +L   M  K
Sbjct: 142 -VANSSAYNIVVVALCKAARVDDALELARTMSEK 174


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 197/393 (50%), Gaps = 29/393 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NG--------NGEFG 53
           A  +F ++   G  PNV+TYN LI G C  G+  + L  F EM  NG        N    
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246

Query: 54  VVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
             CK                    PN ++Y  +I+GLC+EG + +  E+  +M      P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + VT+N+LI+G+C   ++++A  L  EM+  G+ PNVV++  ++N +CK G ++ A   L
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G+ PN   Y TL+DGF   G + +A ++   M   G    + +Y+ LING+C  
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +E A  L  EM+ +G  PDVV Y+T+  G     ++E+AF+L  EM   G++ D   Y
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            + I GLCK   + E  +LF+ +  L    D   Y  LI+  C  G L  A  L   + +
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                D+VTYN++I+      +  +A+ L L +
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 193/369 (52%), Gaps = 29/369 (7%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  T+NTLING C  G+   AL L  EM   NG       PN VTYTT+I+ +CK G +
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVK-NG-----LSPNVVTYTTLINSMCKAGNL 359

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A E   +M+D  ++PN  TY +LI GF       +A  +  EM++ G  P ++++N +
Sbjct: 360 NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  C  G+M++AS LL+ MI+ G  P+   Y+T++ GFC    + +A +L V M + G 
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +YS LI G CK + +     L+ EMLS G+ PD V Y +L         +++A +
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR---AYNCLID 313
           L DEM + G + D   Y   I+G  K     EA  L   L++L YE  +     YN LID
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLL-YEESVPNEITYNTLID 596

Query: 314 ---------------GLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMD 357
                          G C  G +  A  +  S L +G  + + V YN++IH     G ++
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV-YNVIIHGHSKVGNIE 655

Query: 358 KARDLFLDM 366
           KA +L+ +M
Sbjct: 656 KAYNLYKEM 664



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 189/369 (51%), Gaps = 21/369 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV TY TLIN +C+ G+   A+   ++M +          PN  
Sbjct: 326 QALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG------LHPNGR 379

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+IDG  ++GF+ +A ++  +M +    P ++TYN+LI+G C      +A  L  EM
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM 439

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+VVS++ I++  C+N ++++A +L   M+  G+ P+   Y++L+ G C   R+
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M S+G   +  +Y+ LIN YC   +++ AL L+ EM+ KG  PD+V YN L
Sbjct: 500 GEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVL 559

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID---------------GLCKNGYI 286
             G  +  + + A +L  ++       +   Y T ID               G C  G +
Sbjct: 560 INGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLM 619

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA  +  ++    Y+L+   YN +I G  K G ++ A+ L++ +         VT   +
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679

Query: 347 IHALCADGK 355
             +L  +GK
Sbjct: 680 AKSLYHEGK 688



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 169/313 (53%), Gaps = 1/313 (0%)

Query: 58  PNTVTYTTIIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           P  ++Y  I+D + + +  V  A+ +F +M +  ++PNV TYN LI GFC A +      
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLX 224

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            F EM   G  PNVV++N I++  CK  K+ EA +LL LM   G+ PN   YN +++G C
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G++    E+   M       +  +++ LINGYC       AL L++EM+  G+ P+VV
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y TL   + +   + RA +  D+M+  G+  +   Y T IDG  + G++ +A ++ + +
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               +   I  YN LI+G C  GR++ A  L + +     I DVV+Y+ +I   C + ++
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 357 DKARDLFLDMEAK 369
           +KA  L ++M AK
Sbjct: 465 EKAFQLKVEMVAK 477



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 145/296 (48%), Gaps = 23/296 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P + TYN LING C  G    A  L +EM     E G +  P+ V+Y+TII G C+ 
Sbjct: 408 GFTPTIITYNALINGHCILGRMEDASGLLQEMI----ERGFI--PDVVSYSTIISGFCRN 461

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             ++KA +L ++M  + I+P+V TY+SLI G C      E   LF EM+  G+ P+ V++
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N  C  G +D+A RL + MIQ G  P+   YN L++GF    R   A+ L + +  
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYS----------------EMLSKGIKPDVVI 237
                N  +Y+ LI+  C N E + AL+L                   ML KG K +  +
Sbjct: 582 EESVPNEITYNTLIDN-CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV 640

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           YN +  G  ++  +E+A+ L+ EM   G A  +         L   G  VE  +L 
Sbjct: 641 YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 31/165 (18%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNL-----FEEMANGNGEFGVVCKPNTVTYTTIID 68
           G  P++ TYN LING  +   T  A  L     +EE             PN +TY T+ID
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-----------PNEITYNTLID 596

Query: 69  ---------------GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
                          G C +G +++A  +   M  +    N   YN +IHG     +  +
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           A  L+ EM+  G  P+ V+   +   L   GK  E ++LL+  ++
Sbjct: 657 AYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK 701


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  222 bits (565), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/373 (32%), Positives = 201/373 (53%), Gaps = 13/373 (3%)

Query: 2   EAAALFMKLRVFGC------EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 55
           +  +L   +R+ GC       P+V TYNT+I GLCR    + A     +M NG  E    
Sbjct: 342 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFE---- 397

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
             PN  TY +IIDG CK+G V  A  +      +   P+  TY SL++GFC   D ++A 
Sbjct: 398 --PNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAM 455

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +F + + +G++P+++ +N ++  LC+ G +  A +L+  M + G +P+ + YN +++G 
Sbjct: 456 AVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGL 515

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G ++ A  L     + GC  ++F+Y+ L++GYC+  +++ A+ L + M S+G+ PDV
Sbjct: 516 CKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDV 575

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + YNTL  GL +  + E   ++F  M   G A +   Y T I+ LC +  + EAV+L   
Sbjct: 576 ITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGE 635

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV-TYNIMIHALCADG 354
           ++      D+ ++  LI G CK G L  A+ LFR + +   ++    TYNI+I A     
Sbjct: 636 MKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQL 695

Query: 355 KMDKARDLFLDME 367
            M  A  LF +M+
Sbjct: 696 NMKMALRLFSEMK 708



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 203/433 (46%), Gaps = 66/433 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLIN---------------------------------- 27
           EA   F ++ +F C+P+V++YN ++N                                  
Sbjct: 173 EAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRI 232

Query: 28  -GLCRTGHTIVALNLFEEMA---------------NGNGEFG---------------VVC 56
              CRTG    AL L   M                 G  EFG                +C
Sbjct: 233 KSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLC 292

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            P+  T+  ++  LCK+GFV +++ LF K+    + PN+ T+N  I G C     + A  
Sbjct: 293 -PDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   +  +G++P+VV++N ++  LC+  ++ EA   L  M+  G  PN F YN+++DG+C
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G V  A  +       G K + F+Y  L+NG+C++ + + A++++ + L KG++P ++
Sbjct: 412 KKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSII 471

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +YNTL  GL +   +  A +L +EM   G   D W Y   I+GLCK G + +A  L    
Sbjct: 472 VYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDA 531

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  DI  YN L+DG C+  +L  A EL   +    +  DV+TYN +++ LC   K 
Sbjct: 532 ITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKS 591

Query: 357 DKARDLFLDMEAK 369
           ++  ++F  M  K
Sbjct: 592 EEVMEIFKAMTEK 604



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 196/353 (55%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V T+N L++ LC+ G  + +  LF+++         VC PN  T+   I GLCKEG +
Sbjct: 293 PDVTTFNKLVHALCKKGFVLESERLFDKVLKRG-----VC-PNLFTFNIFIQGLCKEGSL 346

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L   +  E + P+VVTYN++I G C  +   EA+    +M++ G +PN  ++N I
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK G + +A+R+L+  +  G +P+ F Y +L++GFC  G  ++A  +F      G 
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + ++  Y+ LI G C+   I  AL L +EM  KG KPD+  YN +  GL ++  +  A  
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +    G   D + Y T +DG C+   +  A+EL   +       D+  YN L++GLC
Sbjct: 527 LIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLC 586

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K+ + +   E+F+++       +++TYN +I +LC   K+++A DL  +M++K
Sbjct: 587 KTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSK 639



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF K+   G  PN+FT+N  I GLC+ G    A+ L   ++          +P+ 
Sbjct: 312 LESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREG------LRPDV 365

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I GLC++  V +A+E   KM +    PN  TYNS+I G+C      +A  +  +
Sbjct: 366 VTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKD 425

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G +P+  ++  ++N  C++G  D+A  + +  +  G+RP+  VYNTL+ G C  G 
Sbjct: 426 AVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGL 485

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   M   GCK ++++Y+++ING CK   +  A  L  + ++KG  PD+  YNT
Sbjct: 486 ILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNT 545

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G     +++ A +L + M   G+  D   Y T ++GLCK     E +E+F+ +    
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +I  YN +I+ LC S ++  A +L   +    L  DVV++  +I   C  G +D A 
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665

Query: 361 DLFLDMEAK 369
            LF  ME +
Sbjct: 666 GLFRGMEKQ 674



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 194/359 (54%), Gaps = 10/359 (2%)

Query: 4   AALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   +K  VF G +P+ FTY +L+NG C+ G    A+ +F++        G   +P+ + 
Sbjct: 419 ANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD------GLGKGLRPSIIV 472

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I GLC++G +  A +L  +M ++   P++ TYN +I+G C     ++A  L  + +
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P++ ++N +++  C+  K+D A  L+  M   G+ P+   YNTL++G C T +  
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              E+F +M   GC  N+ +Y+ +I   C +K++  A+ L  EM SKG+ PDVV + TL 
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 652

Query: 243 IGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            G  ++  ++ A+ LF  M++ + V+  T  Y   I    +   +  A+ LF  ++    
Sbjct: 653 TGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGC 712

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWE-LFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + D   Y  LIDG CK+G +   ++ L  ++ +G  I  + T+  +++ LC + K+ +A
Sbjct: 713 DPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKG-FIPSLTTFGRVLNCLCVEHKVQEA 770



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 172/360 (47%), Gaps = 29/360 (8%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  L  ++   GC+P+++TYN +INGLC+ G    A +L  +           C P+ 
Sbjct: 487 LPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKG------CIPDI 540

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++DG C++  +D A EL  +M  + + P+V+TYN+L++G C      E   +F  
Sbjct: 541 FTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKA 600

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G  PN++++N I+  LC + K++EA  LL  M   G+ P+   + TL+ GFC  G 
Sbjct: 601 MTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGD 660

Query: 181 VNRAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ A  LF  ME      H   +Y+I+I+ + +   ++ AL L+SEM   G  PD   Y 
Sbjct: 661 LDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYR 720

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G  +   V + +K   E    G       +   ++ LC    + EAV +   L + 
Sbjct: 721 VLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIH-LMVQ 779

Query: 300 K----------YELDIR------AYNCLIDGLCKSGRLKIA---WELFRSLPRGVLIADV 340
           K          +E D +      AY  L DG+     LK     W   R  PR    ADV
Sbjct: 780 KDIVPDTVNTIFEADKKGHITYHAYEFLYDGVRDKKILKKKHPNWNSLRREPRSS--ADV 837



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 167/355 (47%), Gaps = 14/355 (3%)

Query: 23  NTLINGL--------CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           NTL+ G+         R G    A++ FE M   N      C P+  +Y  I++ L + G
Sbjct: 151 NTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFN------CDPSVYSYNAIMNILVEFG 204

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           + ++A +++++MKD+ +  +V TY   I  FC       A  L   M   G   N V++ 
Sbjct: 205 YFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYC 264

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++    + G  D A  L + M++  + P+   +N L+   C  G V  +E LF  +   
Sbjct: 265 TVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKR 324

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   N+F+++I I G CK   ++ A+ L   +  +G++PDVV YNT+  GL    +V  A
Sbjct: 325 GVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEA 384

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +   +M   G   + + Y + IDG CK G +V+A  + +      ++ D   Y  L++G
Sbjct: 385 EECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            C+ G    A  +F+      L   ++ YN +I  LC  G +  A  L  +M  K
Sbjct: 445 FCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEK 499



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 9/289 (3%)

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM---MDQGVQPNVVSFNVIMNE 139
            +K   +     + TY S++    +   +NE + L  EM   +D  +   V  +   M  
Sbjct: 107 LIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGV--YVEAMRF 164

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
             + GK+ EA    E M      P+ + YN +M+     G  N+A ++++ M+    + +
Sbjct: 165 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 224

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V++Y+I I  +C+      AL L   M   G   + V Y T+  G +E    +RA +LFD
Sbjct: 225 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 284

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCK 317
           EM    +  D   +   +  LCK G+++E+  LF   ++LK  +  ++  +N  I GLCK
Sbjct: 285 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFD--KVLKRGVCPNLFTFNIFIQGLCK 342

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G L  A  L   + R  L  DVVTYN +I  LC   ++ +A +    M
Sbjct: 343 EGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKM 391


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/367 (34%), Positives = 191/367 (52%), Gaps = 9/367 (2%)

Query: 2   EAAALF--MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +AA L   M+ R  GC P+  TYN +INGL R G    A  L + M           K +
Sbjct: 249 QAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-------KAS 301

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T+  +I G    G V+KA  L L+M++E I P VVTYN++IHG   + +   A+  F+
Sbjct: 302 AFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFV 361

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G+ P+++++N ++N  CK G + EA  L   + + G+ P+   YN L+DG+C  G
Sbjct: 362 EMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLG 421

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A      M   GC+ +V +Y+IL+NG  K + +      + EMLSKG++PD   YN
Sbjct: 422 DLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYN 481

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T       +     AF+L + M   G+++DT  Y  F+DGLCK+G + +A  L+  +   
Sbjct: 482 TRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSD 541

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D   Y CLI   C+ GRL+ A ++F  +    L    VTY + IHA C  G +  A
Sbjct: 542 GLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSA 601

Query: 360 RDLFLDM 366
              F  M
Sbjct: 602 YGWFQKM 608



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 189/366 (51%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL +++   G  P V TYNT+I+G+ R+G+   A   F EM       G++  P+ +
Sbjct: 320 KAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR----AMGLL--PDLI 373

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+G CK G + +A  LF  +K   + P+V+TYN L+ G+C   D  EA+    EM
Sbjct: 374 TYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEM 433

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG QP+V ++ ++MN   K   +       + M+  G++P+ F YNT +    + G  
Sbjct: 434 VEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGST 493

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M S G   +  +Y+I ++G CK+  ++ A  L+ +M+S G++PD + Y  L
Sbjct: 494 SEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCL 553

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E  ++  A  +FD M   G+      Y  FI   C+ G +  A   F+ +     
Sbjct: 554 IHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGV 613

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN LI  LC+ GR  +A++ F  +    L  +  TY ++I   C +G  ++A  
Sbjct: 614 RPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIR 673

Query: 362 LFLDME 367
           L+ +M 
Sbjct: 674 LYSEMH 679



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 168/351 (47%), Gaps = 42/351 (11%)

Query: 1   MEAAAL-FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +EAA + F+++R  G  P++ TYN+LING C+ G+   AL LF ++            P+
Sbjct: 353 VEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG------LAPS 406

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TY  ++DG C+ G +++A+    +M ++   P+V TY  L++G     +    +  F 
Sbjct: 407 VLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFD 466

Query: 120 EMMDQGVQPN-----------------------------------VVSFNVIMNELCKNG 144
           EM+ +G+QP+                                    V++N+ ++ LCK+G
Sbjct: 467 EMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSG 526

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            + +A  L   M+  G++P+   Y  L+   C  GR+  A ++F  M   G   +  +Y+
Sbjct: 527 NLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYT 586

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           + I+ YC+   +  A   + +ML +G++P+ V YN L   L  + +   A++ F EM   
Sbjct: 587 VFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLER 646

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           G++ + + Y   IDG CK G   EA+ L+  +       D   +N L  G 
Sbjct: 647 GLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 127/246 (51%), Gaps = 7/246 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+ F YNT I+     G T  A  L E M +           +TVTY   +DGLCK 
Sbjct: 472 GLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRG------ISSDTVTYNIFLDGLCKS 525

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A  L++KM  + + P+ +TY  LIH  C      EA+ +F  M+  G+ P+ V++
Sbjct: 526 GNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTY 585

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            V ++  C+ G +  A    + M++ GVRPN   YN L+   C  GR N A + F  M  
Sbjct: 586 TVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLE 645

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N ++Y++LI+G CK    E A+ LYSEM   GI PD   +N LF G F+  Q + 
Sbjct: 646 RGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKG-FDEGQSKH 704

Query: 254 AFKLFD 259
           A +  +
Sbjct: 705 AIQYME 710



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 148/289 (51%), Gaps = 3/289 (1%)

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           F +M    + P +   N ++        W++ + ++ EM+  G++P++V++N +++   +
Sbjct: 184 FREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFR 243

Query: 143 NGKMDEASRLLELM--IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            G++D+A++LL  M     G  P+   YN +++G    G + +A +L   M  M  K + 
Sbjct: 244 EGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR-MSKKASA 302

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           F+++ LI GY     +E A +L  EM ++GI P VV YNT+  G+F    VE A   F E
Sbjct: 303 FTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVE 362

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G+  D   Y + I+G CK G + EA+ LF  L+       +  YN L+DG C+ G 
Sbjct: 363 MRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGD 422

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+ A    + +       DV TY I+++       +   R+ F +M +K
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSK 471



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 168/343 (48%), Gaps = 9/343 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           +NT       +  + + L  F EMA+     GV   P       ++  L  E   D  + 
Sbjct: 164 FNTRARNPAPSTCSTLCLAAFREMAH----HGV--PPFIKECNLVLRALRDEARWDDMRS 217

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ--GVQPNVVSFNVIMNE 139
           ++ +M    I P++VTYN+L+  F      ++A  L  EM  +  G  P+ V++NV++N 
Sbjct: 218 VYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVING 277

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L + G++++A++L++ M ++  + +AF +N L+ G+   G V +A  L + ME+ G    
Sbjct: 278 LARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPT 336

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V +Y+ +I+G  ++  +E A   + EM + G+ PD++ YN+L  G  +   ++ A  LF 
Sbjct: 337 VVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFG 396

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +++R G+A     Y   +DG C+ G + EA    + +     + D+  Y  L++G  K  
Sbjct: 397 DLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVR 456

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            L +  E F  +    L  D   YN  I A    G   +A  L
Sbjct: 457 NLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQL 499


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/364 (34%), Positives = 194/364 (53%), Gaps = 12/364 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVT 62
           L +++   GC PNV T+NTLI  LCR G       LFE   E  +   E G  C P+   
Sbjct: 235 LMVEMVRVGCPPNVATFNTLIAYLCRNG-------LFEQVHEALSQMPEHG--CTPDLRM 285

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIIDG+CK+G  + A ++  +M    + PNVV YN+++ G C A  W EA+ L  EM 
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +    + V+FN++++  C+NG +D    LLE M++ G  P+   Y T+++GFC  G V+
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L  +M + GCK N  SY+I++ G C+ +    A  L S M+ +G  P+ V +NTL 
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             + +   VE+A +L  +M  +G + D  +Y T IDGL K G   EA+EL   +      
Sbjct: 466 NFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGIT 525

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   Y+ +   L + GR     ++F S+    + +D   YN +I +LC   + D+A D 
Sbjct: 526 PNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDF 585

Query: 363 FLDM 366
           F  M
Sbjct: 586 FAYM 589



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 180/379 (47%), Gaps = 29/379 (7%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMA-------------------NGNGEFGVV-- 55
           PN +TY  ++  LC  G    AL + +EM                     G G    V  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 56  --------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
                   C  ++     ++  +C++G VD+  EL  K+      P++V+YN+++ G C 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           A  W++ + L +EM+  G  PNV +FN ++  LC+NG  ++    L  M + G  P+  +
Sbjct: 226 AKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRM 285

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y T++DG C  G    A ++   M S G K NV  Y+ ++ G C  +  E A  L +EM 
Sbjct: 286 YATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMF 345

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +    D V +N L     +   V+R  +L ++M  HG   D   Y T I+G CK G + 
Sbjct: 346 QEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVD 405

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           EAV L + +     + +  +Y  ++ GLC++ R   A EL   + +   + + VT+N +I
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLI 465

Query: 348 HALCADGKMDKARDLFLDM 366
           + +C  G +++A +L   M
Sbjct: 466 NFMCKKGLVEQAIELLKQM 484



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 144/295 (48%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++    C  +  T+N L++  C+ G     + L E+M     E G  C P+ +
Sbjct: 336 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML----EHG--CIPDVI 389

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+G CKEG VD+A  L   M      PN ++Y  ++ G C A  W +A+ L   M
Sbjct: 390 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  PN V+FN ++N +CK G +++A  LL+ M+  G  P+   Y+T++DG    G+ 
Sbjct: 450 IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 509

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M + G   N   YS + +   +    +  + ++  +    ++ D  +YN +
Sbjct: 510 EEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAV 569

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  + +RA   F  M  +G   +   Y   I GL   G + EA +L   L
Sbjct: 570 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 153/359 (42%), Gaps = 9/359 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L   G    V  YN +I G CR G    A  L            V   PN  TY  I+  
Sbjct: 67  LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAA---------VPVPPNAYTYFPIVRS 117

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC  G +  A  +  +M            + ++   C    +  A      +  +G   +
Sbjct: 118 LCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLD 177

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
             + N++++ +C+ G +DE   LL  +   G  P+   YN ++ G C+  R +  EEL V
Sbjct: 178 SGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMV 237

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M  +GC  NV +++ LI   C+N   E      S+M   G  PD+ +Y T+  G+ +  
Sbjct: 238 EMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDG 297

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
             E A  +   M  +G+  +   Y T + GLC      EA +L   +      LD   +N
Sbjct: 298 HHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFN 357

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            L+D  C++G +    EL   +     I DV+TY  +I+  C +G +D+A  L  +M A
Sbjct: 358 ILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA 416



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 151/344 (43%), Gaps = 12/344 (3%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           + LI  LC  G T  A    +   +  G          V Y  +I G C+ G V  A+ L
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAG---------VVAYNAMIAGYCRAGQVAAARRL 98

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
              +    + PN  TY  ++   C      +A  +  EM  +G        +VI+   C+
Sbjct: 99  AAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACR 155

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
            G    A R L+++   G   ++   N ++   C  G V+   EL   + S GC+ ++ S
Sbjct: 156 GGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ ++ G C  K  +    L  EM+  G  P+V  +NTL   L      E+  +   +M 
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMP 275

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
            HG   D   Y T IDG+CK+G+   A ++   +     + ++  YN ++ GLC + R +
Sbjct: 276 EHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWE 335

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A +L   + +     D VT+NI++   C +G +D+  +L   M
Sbjct: 336 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 379



 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 6/228 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC+PN  +Y  ++ GLCR    + A  L   M          C PN V
Sbjct: 406 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG------CLPNPV 459

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I+ +CK+G V++A EL  +M     +P++++Y+++I G   A    EA  L   M
Sbjct: 460 TFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 519

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ PN + ++ + + L + G+ D+  ++ + +    VR +A +YN ++   C     
Sbjct: 520 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWET 579

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           +RA + F  M S GC  N  +Y+ILI G      +  A  L SE+ S+
Sbjct: 580 DRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 627



 Score =  101 bits (252), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L   +   GC PN  T+NTLIN +C+ G    A+ L ++M  NG       C P+
Sbjct: 440 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNG-------CSPD 492

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  ++A EL   M ++ I PN + Y+S+          ++   +F 
Sbjct: 493 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 552

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  V+ +   +N +++ LCK  + D A      M+  G  PN   Y  L+ G    G
Sbjct: 553 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 612

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
            V  A++L   + S     KH V  + I+
Sbjct: 613 LVREAQDLLSELCSRRAVRKHLVRHFGIV 641


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/362 (34%), Positives = 196/362 (54%), Gaps = 7/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  K+   GC P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ V
Sbjct: 183 DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 236

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++IDGL KE    +A +LF +M    +  + V Y +LI G   A    +A  ++  M
Sbjct: 237 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTM 296

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG  P+VV+ + +++ LCK G++  A R+ + M   G+ PN  VY+ L+ G C   ++
Sbjct: 297 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 356

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+   M+   C  +  +Y+ILI+G CK+ ++E A + + EML  G KPDV  YN L
Sbjct: 357 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 416

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    + A  +FD+M     + +   Y T I GLCK   + +A   F+ ++    
Sbjct: 417 VSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGC 476

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y+ L+DGLCKSG+L+    LF  + R   +A+  T   +I  LC   ++D+A  
Sbjct: 477 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVS 535

Query: 362 LF 363
           LF
Sbjct: 536 LF 537



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/349 (33%), Positives = 176/349 (50%), Gaps = 31/349 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  L  K+   GC P+V TY +LI+GL +   +  A  LF+EMA               
Sbjct: 218 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALI 277

Query: 47  NGNGEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G  + G +              C P+ VT +T+IDGLCK G +  A  +F  M+   + 
Sbjct: 278 RGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLA 337

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN V Y++LIHG C A   + A  +  +M      P+ +++N++++ LCK+G ++ A   
Sbjct: 338 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAF 397

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M++ G +P+ + YN L+ GFC  G  + A  +F  M S  C  NV +Y  LI+G CK
Sbjct: 398 FDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCK 457

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +++  A   +  M  +G  PD  +Y++L  GL +  ++E    LFDEM+R GVA     
Sbjct: 458 RRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR 517

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            R  I  LCK   + EAV LF  +R         AYN +I  L KS ++
Sbjct: 518 TR-LIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISTLIKSAKV 564



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 184/357 (51%), Gaps = 6/357 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           +G  P++ T+N +++GLC++G  + A++ FE     NG     C  +  TYT I+D L K
Sbjct: 124 YGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTT-NG-----CTIDIHTYTAIVDWLAK 177

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +  A  L  K+      P + TYN+L++G C      EA  L  +++D G  P+VV+
Sbjct: 178 NKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++ L K  +  EA +L + M   G+  +   Y  L+ G    G++ +A  ++ +M 
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S GC  +V + S +I+G CK   I  A+ ++  M ++G+ P+ V+Y+ L  GL +  +++
Sbjct: 298 SQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMD 357

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++  +M++     DT  Y   IDGLCK+G +  A   F  +     + D+  YN L+
Sbjct: 358 CALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILV 417

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G CK+G    A  +F  +       +VVTY  +I  LC   ++ KA   F  M+ +
Sbjct: 418 SGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKER 474



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 146/276 (52%), Gaps = 1/276 (0%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           P+V T+N LI G+C A +  EA  +  EM  D GV P++ + N++++ LCK+GK+  A  
Sbjct: 92  PDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMD 151

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
             E     G   +   Y  ++D      ++  A  L   + + GC   + +Y+ L+NG C
Sbjct: 152 HFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLC 211

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   +E A+ L  +++  G  PDVV Y +L  GL +  +   A+KLF EM   G+  DT 
Sbjct: 212 KMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTV 271

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   I GL + G I +A  +++T+       D+   + +IDGLCK+GR+  A  +F+S+
Sbjct: 272 CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
               L  + V Y+ +IH LC   KMD A ++   M+
Sbjct: 332 EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 367



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 151/297 (50%), Gaps = 3/297 (1%)

Query: 76  VDKAKELF--LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            D A ELF  L         +V T N+L+  F       EA  L    +     P+V ++
Sbjct: 38  ADLAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETW 97

Query: 134 NVIMNELCKNGKMDEA-SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           NV++   C   + +EA + + E+    GV P+   +N ++ G C +G+V  A + F +  
Sbjct: 98  NVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTT 157

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           + GC  ++ +Y+ +++   KNK+I+ A++L  ++ + G  P +  YN L  GL ++ ++E
Sbjct: 158 TNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLE 217

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L  ++  +G   D   Y + IDGL K     EA +LF+ + +    LD   Y  LI
Sbjct: 218 EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALI 277

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            GL ++G++  A  +++++     + DVVT + MI  LC  G++  A  +F  MEA+
Sbjct: 278 RGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 98/180 (54%), Gaps = 8/180 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A F ++   GC+P+V+TYN L++G C+ G+T  A  +F++M++ +      C PN VT
Sbjct: 394 ARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH------CSPNVVT 447

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I GLCK   + KA   F  MK+    P+   Y+SL+ G C +        LF EM 
Sbjct: 448 YGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEME 507

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV  +     +I + LCK  ++DEA  L   + + G+ P+ + YN+++     + +VN
Sbjct: 508 RSGVANSQTRTRLIFH-LCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISTLIKSAKVN 565


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 204/369 (55%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++      P++ +YNTLINGLC+      A+ L  EM          C PN+V
Sbjct: 16  EAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG------CFPNSV 69

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T TT++DGLCK+G +D+A EL   MK +  + +VV Y +LI GFC   + +  K LF EM
Sbjct: 70  TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 129

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  NVV+++ +++ LC+ G+  EA+ +L  M + G+ P+   Y  L+DG C  GR 
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M   G + +  +Y++L++G CK   +  A  +   M+ KG K DVV YNTL
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249

Query: 242 FIGLFEIHQVERAFKLFDEM--QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
             GL +  +V+ A KLF+ M    + +  + + +   I GLCK G + +AV++ R +   
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++  YN L+ G  K+G++K A EL++ +     + +  TY+I+I   C    ++ A
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369

Query: 360 RDLFLDMEA 368
           + LF +M  
Sbjct: 370 KGLFCEMRT 378



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 169/306 (55%), Gaps = 2/306 (0%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GLC+ G V +A  L  +M  ++++P++V+YN+LI+G C A    EA  L +EM   G
Sbjct: 4   VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             PN V+   +M+ LCK+G+MDEA  LLE M + G   +  +Y TL+ GFC  G ++R +
Sbjct: 64  CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ELF  M   G   NV +YS L++G C+  + + A ++ + M   GI PDVV Y  L  GL
Sbjct: 124 ELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGL 183

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +   A  L + M   G       Y   + GLCK G +++A ++ R +     + D+
Sbjct: 184 CKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADV 243

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSL--PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             YN L+ GLC  G++  A +LF S+      L  +V T+N++I  LC +G++ KA  + 
Sbjct: 244 VTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIH 303

Query: 364 LDMEAK 369
             M  K
Sbjct: 304 RKMVKK 309



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 184/370 (49%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   G  P+V TY  LI+GLC+ G    A++L   M    GE     +P+ V
Sbjct: 156 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVE-KGE-----EPSNV 209

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLCKEG V  A ++   M ++    +VVTYN+L+ G C     +EA  LF  M
Sbjct: 210 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 269

Query: 122 MDQG--VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            D    ++PNV +FN+++  LCK G++ +A ++   M++ G   N   YN L+ G    G
Sbjct: 270 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 329

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  A EL+  +  +G   N F+YSILI+G+CK + +  A  L+ EM + G+ P +  YN
Sbjct: 330 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 389

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL   L +   +E+A  LF EM       D  ++ T IDG  K G      EL   +  +
Sbjct: 390 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 449

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   ++ LI+ L K G L  A      +       D + Y+ ++  L + G   + 
Sbjct: 450 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 509

Query: 360 RDLFLDMEAK 369
            +L   M AK
Sbjct: 510 INLLHQMAAK 519



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/268 (38%), Positives = 143/268 (53%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           N ++ G C      EA  L  EM  + V P++VS+N ++N LCK  K+ EA  LL  M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN+    TLMDG C  GR++ A EL  +M+  G   +V  Y  LI+G+C N  ++ 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
              L+ EML KGI  +VV Y+ L  GL  + Q + A  + + M  HG+  D   Y   ID
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GLCK+G    A++L   +     E     YN L+ GLCK G +  A+++ R +      A
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           DVVTYN ++  LC  GK+D+A  LF  M
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSM 269



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 169/340 (49%), Gaps = 8/340 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYN L++GLC+ G  I A  +   M           K + VTY T++ GLC +
Sbjct: 203 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK------KADVVTYNTLMKGLCDK 256

Query: 74  GFVDKAKELFLKMKD-EN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           G VD+A +LF  M D EN + PNV T+N LI G C      +A  +  +M+ +G   N+V
Sbjct: 257 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV 316

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++N+++    K GK+ EA  L + ++ +G  PN+F Y+ L+DGFC    +N A+ LF  M
Sbjct: 317 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 376

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            + G    +F Y+ L+   CK   +E A SL+ EM +   +PD++ +NT+  G  +    
Sbjct: 377 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 436

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           +   +L  +M   G+  D   + T I+ L K G + EA      +    +  D   Y+ L
Sbjct: 437 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 496

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           + GL   G       L   +     + D    + ++  LC
Sbjct: 497 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 137/280 (48%), Gaps = 6/280 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EPNVFT+N LI GLC+ G    A+ +  +M    G  G     N VTY  ++ G  K G 
Sbjct: 277 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK-KGSCG-----NLVTYNMLLGGCLKAGK 330

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A EL+ ++ D    PN  TY+ LI GFC     N AK LF EM   G+ P +  +N 
Sbjct: 331 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 390

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +M  LCK G +++A  L + M      P+   +NT++DG    G     +EL + M  MG
Sbjct: 391 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 450

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +  ++S LIN   K  E++ A S    M++ G  PD ++Y++L  GL          
Sbjct: 451 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 510

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
            L  +M   G   D     T +  LC +   V+ +EL  T
Sbjct: 511 NLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPT 550



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 165/337 (48%), Gaps = 4/337 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +V TYNTL+ GLC  G    AL LF  M +         +PN  T+  +I GLCKE
Sbjct: 238 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN----CLEPNVFTFNMLIGGLCKE 293

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + KA ++  KM  +    N+VTYN L+ G   A    EA  L+ +++D G  PN  ++
Sbjct: 294 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 353

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  CK   ++ A  L   M   G+ P  F YNTLM   C  G + +A+ LF  M +
Sbjct: 354 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 413

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C+ ++ S++ +I+G  K  + +    L  +M+  G++PD + ++TL   L ++ +++ 
Sbjct: 414 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDE 473

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A    + M   G   D   Y + + GL   G   E + L   +      LD +  + ++ 
Sbjct: 474 AKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 533

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            LC S +     EL  +  +G      ++ N ++  L
Sbjct: 534 CLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 570



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 29/185 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------- 49
           A  LF ++R  G  P +F YNTL+  LC+ G    A +LF+EM N N             
Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 428

Query: 50  -----GEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                G+F  V            +P+ +T++T+I+ L K G +D+AK    +M      P
Sbjct: 429 GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTP 488

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + + Y+SL+ G     D  E   L  +M  +G   +    + I+  LC + +  +   LL
Sbjct: 489 DALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548

Query: 154 ELMIQ 158
               Q
Sbjct: 549 PTFFQ 553



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 37/60 (61%)

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N ++ GLC++G +  A  L R + R  +  D+V+YN +I+ LC   K+ +A  L L+MEA
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 195/362 (53%), Gaps = 7/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  K+   GC P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ V
Sbjct: 52  EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 105

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++IDGL K+    +A +LF +M    +  + V Y +LI G   A    +A  ++  M
Sbjct: 106 TYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTM 165

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG  P+VV+ + +++ LCK G++  A R+ + M   G+ PN  VY+ L+ G C   ++
Sbjct: 166 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 225

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+   M+   C  +  +Y+ILI+G CK+ ++  A + + EML  G KPDV  YN L
Sbjct: 226 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNIL 285

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    + A  +FD+M     + +   Y T I GLCK   + +A   ++ ++    
Sbjct: 286 ISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGC 345

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y+ L+DGLCKSG+L+    LF  + R   +A+  T   +I  LC   ++D+A  
Sbjct: 346 PPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSG-VANSQTRTRLIFHLCKANRVDEAVS 404

Query: 362 LF 363
           LF
Sbjct: 405 LF 406



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 178/359 (49%), Gaps = 31/359 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---- 57
           EA  L  K+   GC P+V TY +LI+GL +   +  A  LF+EMA+       VC     
Sbjct: 87  EAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALI 146

Query: 58  -------------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    P+ VT +T+IDGLCK G +  A  +F  M+   + 
Sbjct: 147 RGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLA 206

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN V Y++LIHG C A   + A  +  +M      P+ +++N++++ LCK+G +  A   
Sbjct: 207 PNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAF 266

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M++ G +P+ + YN L+ GFC  G  + A  +F  M S  C  NV +Y  LI+G CK
Sbjct: 267 FDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCK 326

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +++  A   Y  M  +G  PD  +Y++L  GL +  ++E    LFDEM+R GVA     
Sbjct: 327 RRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR 386

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            R  I  LCK   + EAV LF  +R         AYN +I  L KSG++     +++ +
Sbjct: 387 TR-LIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 183/368 (49%), Gaps = 8/368 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A +L  +    GC  ++ TY T+++ L +      A+ L E++ ANG       C P 
Sbjct: 16  IQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG-------CTPT 68

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY  +++GLCK G +++A +L  K+ D    P+VVTY SLI G        EA  LF 
Sbjct: 69  IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFK 128

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G+  + V +  ++  L + GK+ +AS + + M   G  P+    +T++DG C  G
Sbjct: 129 EMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAG 188

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+  A  +F SME+ G   N   YS LI+G CK ++++ AL + ++M      PD + YN
Sbjct: 189 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 248

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GL +   V  A   FDEM   G   D + Y   I G CK G    A  +F  +   
Sbjct: 249 ILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSS 308

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +   ++  Y  LI GLCK  +L  A   ++ +       D   Y+ ++  LC  GK++  
Sbjct: 309 RCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGG 368

Query: 360 RDLFLDME 367
             LF +ME
Sbjct: 369 CMLFDEME 376



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 179/349 (51%), Gaps = 6/349 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T++ LINGL + G  I A +L +E    NG     C  +  TYTTI+D L K   + +A 
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTT-NG-----CTIDIHTYTTIVDWLAKNKKIQEAV 54

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            L  K+      P + TYN+L++G C      EA  L  +++D G  P+VV++  +++ L
Sbjct: 55  ALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGL 114

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            K  +  EA +L + M   G+  +   Y  L+ G    G++ +A  ++ +M S GC  +V
Sbjct: 115 GKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDV 174

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            + S +I+G CK   I  A+ ++  M ++G+ P+ V+Y+ L  GL +  +++ A ++  +
Sbjct: 175 VTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQ 234

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M++     DT  Y   IDGLCK+G +  A   F  +     + D+  YN LI G CK+G 
Sbjct: 235 MKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGN 294

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              A  +F  +       +VVTY  +I  LC   ++ KA   +  M+ +
Sbjct: 295 TDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKER 343


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 133/367 (36%), Positives = 186/367 (50%), Gaps = 9/367 (2%)

Query: 2   EAAALF--MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +A AL   M+ R  GC PN  TYN +INGL R G    A  L + M           K +
Sbjct: 247 QAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-------KAS 299

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY  +I GL    FV+KA  L L+M++E I P VVTYN+LI G     +   A+  F 
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G+ P+++++N ++N  CK G + +A  L   + + G+ P    YN L+DG+C  G
Sbjct: 360 EMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLG 419

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A  L   M    C  +V +Y+IL+NG C  + +      + EMLSKG++PD   YN
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYN 479

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T       I  +  AF+L +EM   G+++DT  Y   IDGLCK G + +A  L+  +   
Sbjct: 480 TRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTD 539

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              LD   Y CLI   C+ GRL  A  +F  +    L   VVTY I IH  C  G +  A
Sbjct: 540 GLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLA 599

Query: 360 RDLFLDM 366
              F  M
Sbjct: 600 YGWFRKM 606



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 194/366 (53%), Gaps = 7/366 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTY 63
           A++  +   G EP++FTYNTL++  C+ G    A+ L ++M A   G     C PN VTY
Sbjct: 215 AVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAG-----CLPNDVTY 269

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
             +I+GL ++G ++KA +L   M+      +  TYN LI G    +   +A  L +EM +
Sbjct: 270 NVVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLITGLLARDFVEKAGALLLEMEN 328

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G+ P VV++N +++ L K G  + A    + M   G+ P+   YN+L++G+C  G + +
Sbjct: 329 EGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQ 388

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  LF  ++  G    V +Y+ILI+GYC+  ++EGA  L  EM  +   PDV  Y  L  
Sbjct: 389 ALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMN 448

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G   +  +      FDEM   G+  D +AY T I      G I  A +L   + +     
Sbjct: 449 GSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISS 508

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D   YN LIDGLCK+G LK A+ L+  +    L  D VTY  +IHA C  G++ +A+++F
Sbjct: 509 DTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIF 568

Query: 364 LDMEAK 369
             M A 
Sbjct: 569 DGMVAS 574



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 183/369 (49%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A AL +++   G  P V TYNTLI+GL +TG+   A   F+EM A G         P+ 
Sbjct: 318 KAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKG-------LLPDL 370

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY ++I+G CK G + +A  LF  +K   + P V+TYN LI G+C   D   A+ L  E
Sbjct: 371 ITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEE 430

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++   P+V ++ ++MN  C    +       + M+  G+ P+ F YNT +      G 
Sbjct: 431 MTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGA 490

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   M   G   +  +Y++LI+G CK   ++ A  L+ +M++ G++ D V Y  
Sbjct: 491 ITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTC 550

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     E  ++  A  +FD M   G++     Y  FI   C+ G +  A   FR +    
Sbjct: 551 LIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEG 610

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E +   YN L+  LC+ GR + A++ F  +    L+ +  TY ++I   C +G    A 
Sbjct: 611 VEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAI 670

Query: 361 DLFLDMEAK 369
            L+ +M  K
Sbjct: 671 RLYCEMHQK 679



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 168/349 (48%), Gaps = 42/349 (12%)

Query: 2   EAAAL-FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EAA + F ++R  G  P++ TYN+LING C+ G+   AL LF ++            P  
Sbjct: 352 EAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAG------LGPTV 405

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY  +IDG C+ G ++ A+ L  +M +E+  P+V TY  L++G C   +    +  F E
Sbjct: 406 LTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDE 465

Query: 121 MMDQGVQPN-----------------------------------VVSFNVIMNELCKNGK 145
           M+ +G++P+                                    V++NV+++ LCK G 
Sbjct: 466 MLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGS 525

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           + +A  L   M+  G+R +   Y  L+   C  GR+  A+ +F  M + G   +V +Y+I
Sbjct: 526 LKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTI 585

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            I+ YC+   +  A   + +ML +G++P+ V YN L   L  + + E A++ F EM   G
Sbjct: 586 FIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERG 645

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           +  + + Y   IDG CK G  V A+ L+  +       D   +N L  G
Sbjct: 646 LVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKG 694



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 150/289 (51%), Gaps = 3/289 (1%)

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           F +M    + P V   N ++     A  W++ + ++ +M+  GV+P++ ++N +++  CK
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 143 NGKMDEASRLLELM--IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            G+MD+A  LL+ M     G  PN   YN +++G    G + +A +L V +  +  K + 
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQL-VDIMRLSKKASA 300

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           F+Y+ LI G      +E A +L  EM ++GI P VV YNTL  GLF+    E A   FDE
Sbjct: 301 FTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDE 360

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G+  D   Y + I+G CK G + +A+ LF  L+       +  YN LIDG C+ G 
Sbjct: 361 MRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGD 420

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+ A  L   +     + DV TY I+++  C    +   R  F +M +K
Sbjct: 421 LEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSK 469



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/236 (36%), Positives = 118/236 (50%), Gaps = 6/236 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+ F YNT I+     G    A  L EEM             +TVTY  +IDGLCK 
Sbjct: 470 GLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRG------ISSDTVTYNVLIDGLCKT 523

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A  L++KM  + +  + VTY  LIH  C      EAK +F  M+  G+ P+VV++
Sbjct: 524 GSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTY 583

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            + ++  C+ G +  A      M++ GV PN   YN LM   C  GR   A + F  M  
Sbjct: 584 TIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLE 643

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            G   N ++Y++LI+G CK      A+ LY EM  KGI PD   +N LF G  E H
Sbjct: 644 RGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGH 699



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 171/366 (46%), Gaps = 46/366 (12%)

Query: 39  LNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           L+ F+EMA +G   F   C         ++  L      D  + ++  M    + P++ T
Sbjct: 179 LSAFQEMARHGVAPFVKECN-------CVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFT 231

Query: 98  YNSLIHGFCYANDWNEAKCLF--IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           YN+L+  FC A   ++A  L   +E    G  PN V++NV++N L + G++++A++L+++
Sbjct: 232 YNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDI 291

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M ++  + +AF YN L+ G      V +A  L + ME+ G    V +Y+ LI+G  K   
Sbjct: 292 M-RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGN 350

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            E A   + EM +KG+ PD++ YN+L  G  +   +++A  LF +++R G+      Y  
Sbjct: 351 AEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNI 410

Query: 276 FIDGLCKNGYIVEAVEL-------------------------FRTLRILK---------- 300
            IDG C+ G +  A  L                          R L +++          
Sbjct: 411 LIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKG 470

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E D  AYN  I      G +  A++L   +    + +D VTYN++I  LC  G +  A 
Sbjct: 471 LEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAY 530

Query: 361 DLFLDM 366
            L++ M
Sbjct: 531 VLWMKM 536



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 3/150 (2%)

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           LS + EM   G+ P V   N +   L +  + +    ++ +M + GV    + Y T +D 
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 280 LCKNGYIVEAVELFRTL--RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            CK G + +AV L + +  R      +   YN +I+GL + G L+ A +L   + R    
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLV-DIMRLSKK 297

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
           A   TYN +I  L A   ++KA  L L+ME
Sbjct: 298 ASAFTYNPLITGLLARDFVEKAGALLLEME 327


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 199/354 (56%), Gaps = 9/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P++FT+N +I+GLC+TG     L    ++A     +G+   P+ VTY TIIDG CK G 
Sbjct: 182 SPDLFTFNIVISGLCKTGQ----LRKAGDVAKDIRAWGLA--PSVVTYNTIIDGYCKRGR 235

Query: 76  VDK---AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
             +      L  +M +  I+PN VT+N L++G+C  ++   A  +F EM  QG+  +VV+
Sbjct: 236 AGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVT 295

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ ++  LC  GK++E  +L++ M  +G+ PN    N++++GFC  G +  AE    SME
Sbjct: 296 YSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSME 355

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               K NV +Y+IL++GY +  +++ AL++   M  KG++P+  IYN L  G        
Sbjct: 356 QKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWR 415

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
               L DEM+  GV AD   Y   I  LC  G + +AV+L   + ++  E     YN +I
Sbjct: 416 SVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTII 475

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +G C+ G +K A+E+   + +G   A+VVTYN+ I  LC  GKM++  +L  +M
Sbjct: 476 NGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEM 529



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 174/354 (49%), Gaps = 9/354 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLC---RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           +R +G  P+V TYNT+I+G C   R G       L +EM     E G+   PN VT+  +
Sbjct: 211 IRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV----EAGI--SPNEVTFNVL 264

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           ++G CK+     A  +F +MK + I  +VVTY++L+ G C      E   L  EM D G+
Sbjct: 265 VNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGL 324

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            PN+ + N ++N  CK G M +A   ++ M Q  V+PN   Y  L+DG+    ++  A  
Sbjct: 325 VPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALA 384

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +  +M   G + N   Y+ LI G+ +N +      L  EM  KG++ D+V YN L   L 
Sbjct: 385 VKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALC 444

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              +V +A KL DEM   G+      Y T I+G C+ G I  A E+   +   K   ++ 
Sbjct: 445 VKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVV 504

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            YN  I  LC+ G+++   EL   +    L+ + VTY+ +   +   G     R
Sbjct: 505 TYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMMEKGYTPDVR 558



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 155/289 (53%), Gaps = 6/289 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL  ++   G  PN  T+N L+NG C+  +T  A+ +FEEM     + G+    + VTY+
Sbjct: 244 ALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMK----QQGIAA--SVVTYS 297

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            ++ GLC EG V++  +L  +MKD  + PN+ T NS+++GFC      +A+     M  +
Sbjct: 298 ALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQK 357

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+PNVV++ ++++   +  KM +A  + E M   GVRPNA +YN L+ GF   G     
Sbjct: 358 NVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSV 417

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M   G + ++ +Y++LI   C   E+  A+ L  EML  G++P  + YNT+  G
Sbjct: 418 SGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIING 477

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
             E   ++ A+++   M++    A+   Y  FI  LC+ G + E  EL 
Sbjct: 478 YCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELL 526



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 131/246 (53%), Gaps = 6/246 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L  +++  G  PN+ T N+++NG C+ G    A    + M   N       KPN V
Sbjct: 311 EGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKN------VKPNVV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DG  +   +  A  +   M  + + PN   YN LI GF    DW     L  EM
Sbjct: 365 TYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++V++NV++  LC  G++ +A +LL+ M+ +G+ P    YNT+++G+C  G +
Sbjct: 425 RMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNI 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+   ME    + NV +Y++ I   C+  ++E    L +EML KG+ P+ V Y+T+
Sbjct: 485 KSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTI 544

Query: 242 FIGLFE 247
             G+ E
Sbjct: 545 KEGMME 550



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 155/326 (47%), Gaps = 40/326 (12%)

Query: 81  ELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           E FL   D +    P+  + N L+     A   + A+  F   + + V P++ +FN++++
Sbjct: 134 EAFLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVIS 193

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR---AEELFVSMESMG 195
            LCK G++ +A  + + +   G+ P+   YNT++DG+C  GR  R    + L   M   G
Sbjct: 194 GLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAG 253

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              N  ++++L+NGYCK+     A+ ++ EM  +GI   VV Y+ L  GL    +VE   
Sbjct: 254 ISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGV 313

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA----------------------VELF 293
           KL DEM+  G+  +     + ++G CK G + +A                      V+ +
Sbjct: 314 KLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGY 373

Query: 294 RTLRILKYELDI-------------RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           R L  +K  L +             R YNCLI G  ++G  +    L   +    + AD+
Sbjct: 374 RRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADI 433

Query: 341 VTYNIMIHALCADGKMDKARDLFLDM 366
           VTYN++I ALC  G++ KA  L  +M
Sbjct: 434 VTYNVLIGALCVKGEVRKAVKLLDEM 459



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 128/248 (51%), Gaps = 12/248 (4%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           +P+  S N +++ L    ++D A R  +  ++  V P+ F +N ++ G C TG++ +A +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL----SLYSEMLSKGIKPDVVIYNTLF 242
           +   + + G   +V +Y+ +I+GYCK     G +    +L  EM+  GI P+ V +N L 
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGR-AGRMYHVDALLKEMVEAGISPNEVTFNVLV 265

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +      A ++F+EM++ G+AA    Y   + GLC  G + E V+L   ++ L   
Sbjct: 266 NGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLV 325

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG--KMDKAR 360
            ++   N +++G CK G +  A     S+ +  +  +VVTY I++     DG  ++DK +
Sbjct: 326 PNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILV-----DGYRRLDKMK 380

Query: 361 DLFLDMEA 368
           D     EA
Sbjct: 381 DALAVKEA 388



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 22/133 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++ + G EP   TYNT+ING C  G+   A  +   M  G        + N V
Sbjct: 451 KAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKK------RANVV 504

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY   I  LC+ G +++  EL  +M ++ + PN VTY+++  G                M
Sbjct: 505 TYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEG----------------M 548

Query: 122 MDQGVQPNVVSFN 134
           M++G  P+V  F 
Sbjct: 549 MEKGYTPDVRGFT 561


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  221 bits (563), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 188/340 (55%), Gaps = 9/340 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV T++ +INGLC+ G    A ++ E+M      +G    P+ +TY TIIDG CK G + 
Sbjct: 228 NVVTFDVVINGLCKVGKFQKAGDVVEDMK----AWGF--SPSVITYNTIIDGYCKAGKMF 281

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA  L  +M  + I+PN +T+N LI GFC   +   AK +F EM  QG+QPNVV++N ++
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLI 341

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LC NGK+DEA  L + M  +G++PN   YN L++GFC    +  A E+   +   G  
Sbjct: 342 NGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLA 401

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +++ LI+ Y K   ++ A  L S ML  G+ P+V  YN L +G      V+ A KL
Sbjct: 402 PNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKL 461

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE---LDIRAYNCLIDG 314
             EM+ +G+ AD   Y   +D LCK G   +AV L   + +++ +    +I  YN LI G
Sbjct: 462 AKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKG 521

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            C  G+L+ A  L   +    LI +  TY+I+   +   G
Sbjct: 522 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/360 (31%), Positives = 195/360 (54%), Gaps = 9/360 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           +G   +  + N ++  L + G   V  ++++EM       GV    N VT+  +I+GLCK
Sbjct: 188 YGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR--RIGV----NVVTFDVVINGLCK 241

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G   KA ++   MK    +P+V+TYN++I G+C A    +A  L  EM+ + + PN ++
Sbjct: 242 VGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEIT 301

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN++++  C++  +  A ++ E M + G++PN   YN+L++G C  G+++ A  L   M 
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            MG K NV +Y+ LING+CK K ++ A  +  ++  +G+ P+V+ +NTL     +  +++
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF L   M   GV  +   Y   I G C+ G + EA +L + +     + D+  YN L+
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481

Query: 313 DGLCKSGRLKIAWELFRSLP---RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D LCK G  + A  L   +    +    A++VTYN++I   C  GK+++A  L  +M  K
Sbjct: 482 DALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK 541



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 193/365 (52%), Gaps = 8/365 (2%)

Query: 4   AALFMKLRVFGCE--PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           + +F  L V G     N    + L+    + G   +AL  F+      G++G   + + +
Sbjct: 142 STIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRA----GDYGF--RLSAL 195

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +   ++  L KEG +   + ++ +M    I  NVVT++ +I+G C    + +A  +  +M
Sbjct: 196 SCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDM 255

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+V+++N I++  CK GKM +A  LL+ M+   + PN   +N L+DGFC    V
Sbjct: 256 KAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENV 315

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+++F  M+  G + NV +Y+ LING C N +++ AL L  +M   G+KP+VV YN L
Sbjct: 316 TAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNAL 375

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A ++ D++ + G+A +   + T ID   K G + +A  L   +     
Sbjct: 376 INGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  YNCLI G C+ G +K A +L + +    L AD+VTYNI++ ALC  G+  KA  
Sbjct: 436 CPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVR 495

Query: 362 LFLDM 366
           L  +M
Sbjct: 496 LLDEM 500



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 161/298 (54%), Gaps = 9/298 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +   ++ +G  P+V TYNT+I+G C+ G    A  L +EM            PN +
Sbjct: 247 KAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMV------AKRIHPNEI 300

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +IDG C++  V  AK++F +M+ + + PNVVTYNSLI+G C     +EA  L  +M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV++N ++N  CK   + EA  +L+ + + G+ PN   +NTL+D +   GR+
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   NV +Y+ LI G+C+   ++ A  L  EM   G+K D+V YN L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480

Query: 242 FIGLFEIHQVERAFKLFDE---MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  +  +A +L DE   M++ G  A+   Y   I G C  G + EA  L   +
Sbjct: 481 VDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEM 538



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 157/290 (54%), Gaps = 9/290 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++      PN  T+N LI+G CR  +   A  +FEEM           +PN V
Sbjct: 282 KADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQG------LQPNVV 335

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+GLC  G +D+A  L  KM    + PNVVTYN+LI+GFC      EA+ +  ++
Sbjct: 336 TYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDI 395

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PNV++FN +++   K G+MD+A  L  +M+  GV PN   YN L+ GFC  G V
Sbjct: 396 GKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNV 455

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML---SKGIKPDVVIY 238
             A +L   ME  G K ++ +Y+IL++  CK  E   A+ L  EM     KG + ++V Y
Sbjct: 456 KEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTY 515

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           N L  G     ++E A +L +EM   G+  +   Y    D + + G+I +
Sbjct: 516 NVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 565



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 165/312 (52%), Gaps = 4/312 (1%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N++    ++    K G +D A E F +  D     + ++ N ++            + ++
Sbjct: 158 NSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVY 217

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ + +  NVV+F+V++N LCK GK  +A  ++E M   G  P+   YNT++DG+C  
Sbjct: 218 KEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKA 277

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++ +A+ L   M +     N  +++ILI+G+C+++ +  A  ++ EM  +G++P+VV Y
Sbjct: 278 GKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTY 337

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L  GL    +++ A  L D+M   G+  +   Y   I+G CK   + EA E+   +  
Sbjct: 338 NSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGK 397

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRS--LPRGVLIADVVTYNIMIHALCADGKM 356
                ++  +N LID   K+GR+  A+ L RS  L  GV   +V TYN +I   C +G +
Sbjct: 398 RGLAPNVITFNTLIDAYGKAGRMDDAF-LLRSMMLDTGV-CPNVSTYNCLIVGFCREGNV 455

Query: 357 DKARDLFLDMEA 368
            +AR L  +ME 
Sbjct: 456 KEARKLAKEMEG 467



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 120/237 (50%), Gaps = 25/237 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G +PNV TYN LING C+       L    EM +  G+ G+   PN +
Sbjct: 352 EALGLQDKMSGMGLKPNVVTYNALINGFCKKK----MLKEAREMLDDIGKRGLA--PNVI 405

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+ID   K G +D A  L   M D  + PNV TYN LI GFC   +  EA+ L  EM
Sbjct: 406 TFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM 465

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE---LMIQIGVRPNAFVYNTLMDGFCLT 178
              G++ ++V++N++++ LCK G+  +A RLL+   LM + G R N   YN L+ GFC  
Sbjct: 466 EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNK 525

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           G++  A  L   M   G   N  +Y I                L  EM+ KG  PD+
Sbjct: 526 GKLEEANRLLNEMLEKGLIPNRTTYDI----------------LRDEMMEKGFIPDI 566



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 26/312 (8%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNS-LIHGFCYANDWNEAKCLFIE---------MMDQG 125
           ++  K  F         PN  T+++  I        W++ K +  E         + +  
Sbjct: 25  LNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTIVKETNPSSLLQHLFNSE 84

Query: 126 VQPNVV--SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN---TLMDGFCLTGR 180
            QP+++   F     E      +++  RLL L+       NA  YN    L+D F     
Sbjct: 85  AQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLL------ANAKNYNKIRALLDSFAKNAH 138

Query: 181 VNRAEELFVSME---SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            + +  +F S+    S GC +++    +L+  Y KN E++ AL  +      G +   + 
Sbjct: 139 YSNST-IFHSLSVLGSWGCANSII-VDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALS 196

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            N + + L +  ++     ++ EM R  +  +   +   I+GLCK G   +A ++   ++
Sbjct: 197 CNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK 256

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              +   +  YN +IDG CK+G++  A  L + +    +  + +T+NI+I   C D  + 
Sbjct: 257 AWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVT 316

Query: 358 KARDLFLDMEAK 369
            A+ +F +M+ +
Sbjct: 317 AAKKVFEEMQRQ 328


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/363 (34%), Positives = 198/363 (54%), Gaps = 6/363 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +A  L  ++   GC P+V TY++LI GL + G T+ A  LF+EM           KP++
Sbjct: 166 QKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGR------KPDS 219

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T+T ++D L K G VD A EL  +MK+  + P VVTYN+LI GF    D  EA  L  E
Sbjct: 220 ITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDE 279

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G +P+VV+++ ++  L K  ++DEA ++L+ M + G  P+   YNTL++G    G 
Sbjct: 280 MKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGL 339

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A  LF  M+S GC  +V +YS LI    K   +E A  L+ EM S GI+PD+  Y +
Sbjct: 340 LNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L +  QV+ A +LF EM+  G++ D   Y  F++ L + G   EA ++F  ++   
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+  Y+ L+ GL K+  +  A  L + L       D + ++  +  L + G +D+A 
Sbjct: 460 LLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAH 519

Query: 361 DLF 363
           +L 
Sbjct: 520 ELL 522



 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 193/358 (53%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++R  GC P+ FTYN+LI GL + G +  A+ L EEM          C P+ +
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG------CPPDVM 185

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I GL K+G   KA +LF +MK     P+ +T+ +L+     A   ++A  L  EM
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+P VV++N ++    K G + EA  LL+ M + G +P+   Y+ L+ G     ++
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQL 305

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   ME  GC  +  +Y+ LING  K   +  A  L+  M SKG  PDVV Y+TL
Sbjct: 306 DEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTL 365

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +VE A  LF+EM+  G+  D + Y + I  L K G + +A  LF  +R    
Sbjct: 366 ITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGL 425

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D+  YN  ++ L + GR K A ++F  +    L+ DV TY+ ++  L    ++D A
Sbjct: 426 SPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDA 483



 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/366 (36%), Positives = 194/366 (53%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++R  GC P+V TYN LI+ L + G    A  LF EM     E G  C P+T 
Sbjct: 97  EALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMR----ERG--CVPDTF 150

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GL K G   KA EL  +M+     P+V+TY+SLI G     +  +A  LF EM
Sbjct: 151 TYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEM 210

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +P+ ++F  +M+ L K G++D+A  LL+ M + GV+P    YN L+ GF   G +
Sbjct: 211 KRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDL 270

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M+  GCK +V +YS LI G  K  +++ A  +  +M  +G  PD + YNTL
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTL 330

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +  A +LFD M+  G   D   Y T I  L K   +  A  LF  +  +  
Sbjct: 331 INGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGI 390

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y  +I  L K+G++  A  LF  +    L  DV+TYN  +++L   G+  +AR 
Sbjct: 391 QPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARK 450

Query: 362 LFLDME 367
           +F DM+
Sbjct: 451 IFEDMK 456



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 186/353 (52%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV TYN+L+N L + G    A  LFEE+            P+ V+Y+ +I+ L + G  
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAK------WTPDVVSYSCLINSLGRAGKW 60

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A E+  +M+ +   PN+ TYN+L+     A  ++EA  L  EM D G  P+V ++N +
Sbjct: 61  EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCL 120

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L K G++ EA  L   M + G  P+ F YN+L+ G    GR  +A EL   ME  GC
Sbjct: 121 ISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGC 180

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +YS LI G  K+ E   A  L+ EM  +G KPD + +  L   L +  +V+ A +
Sbjct: 181 PPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALE 240

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L DEM+  GV      Y   I G  K G +VEA  L   ++    + D+  Y+CLI GL 
Sbjct: 241 LLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLI 300

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K+ +L  A ++ + + +     D +TYN +I+ L   G ++ A  LF  M++K
Sbjct: 301 KASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353



 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 130/368 (35%), Positives = 191/368 (51%), Gaps = 8/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  LF +L+     P+V +Y+ LIN L R G    AL +  EM A G       CKPN 
Sbjct: 27  EAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG-------CKPNL 79

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++D L K G  D+A  L  +M+D    P+V TYN LI     A   +EA  LF E
Sbjct: 80  WTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAE 139

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G  P+  ++N ++  L K G+  +A  LLE M + G  P+   Y++L+ G    G 
Sbjct: 140 MRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGE 199

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             +A +LF  M+  G K +  +++ L++   K   ++ AL L  EM  +G+KP VV YN 
Sbjct: 200 TVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++  +  A+ L DEM+R+G   D   Y   I GL K   + EA ++ + +    
Sbjct: 260 LIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG 319

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   YN LI+GL K+G L  A  LF  +       DVVTY+ +I AL    +++ A 
Sbjct: 320 CPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESAC 379

Query: 361 DLFLDMEA 368
            LF +ME+
Sbjct: 380 VLFEEMES 387



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 196/367 (53%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  +++  GC+PN++TYNTL++ L + G    AL L  EM + NG     C P+  T
Sbjct: 63  ALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRD-NG-----CVPDVRT 116

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I  L K G + +A  LF +M++    P+  TYNSLI+G        +A  L  EM 
Sbjct: 117 YNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEME 176

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+V++++ ++  L K+G+  +A +L + M + G +P++  +  LMD     GRV+
Sbjct: 177 RHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVD 236

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M+  G K  V +Y+ LI G+ K  ++  A +L  EM   G KPDVV Y+ L 
Sbjct: 237 DALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLI 296

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  Q++ A ++  +M++ G   DT  Y T I+GL K G + +A  LF  ++     
Sbjct: 297 TGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCN 356

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y+ LI  L K+ R++ A  LF  +    +  D+ TY  +I  L   G++D A  L
Sbjct: 357 PDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRL 416

Query: 363 FLDMEAK 369
           F +M  K
Sbjct: 417 FSEMRGK 423



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 175/350 (50%), Gaps = 6/350 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  +++  GC+P+V TY+ LI GL +      A  + ++M          C P+T
Sbjct: 271 VEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEG------CPPDT 324

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+I+GL K G ++ A  LF +MK +  NP+VVTY++LI     A     A  LF E
Sbjct: 325 ITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEE 384

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+QP++ ++  I+  L K G++D+A RL   M   G+ P+   YN  ++     GR
Sbjct: 385 MESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A ++F  M+  G   +V +Y  L+ G  K KE++ A  L  E++ +G   D + ++ 
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               L     V+ A +L       G+     +Y   ID L K G + EA      L+   
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            + DI +Y+ LI  L ++G++  A+EL   + +  L     +Y+ ++  L
Sbjct: 565 GKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 151/276 (54%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +PNVVTYNSL++    A    EA+ LF E+      P+VVS++ ++N L + GK + A  
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           ++  M   G +PN + YNTL+D     G+ + A  L   M   GC  +V +Y+ LI+   
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   +  A +L++EM  +G  PD   YN+L  GL ++ + ++A +L +EM+RHG   D  
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y + I GL K+G  V+A +LF+ ++    + D   +  L+D L K+GR+  A EL   +
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
               +   VVTYN +I      G + +A +L  +M+
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMK 281


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 191/359 (53%), Gaps = 8/359 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A A+F  +   GC P+V TY+ L++  C+      A+ L +EM A G       C+P+ 
Sbjct: 180 DALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKG-------CEPDI 232

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I+ +C EG VD+A  +   +      P+ VTY  ++   C +  W E + LF E
Sbjct: 233 VTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAE 292

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+ V+FN I+  LC+ G +D A ++++ M + G  P+   Y++++DG C  GR
Sbjct: 293 MASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A EL   ++S GCK +  +Y+ ++ G C  ++ E A  L +EM+     PD V +NT
Sbjct: 353 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNT 412

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L +   V+RA K+ ++M  +G   D   Y + IDGLC    I +A+EL   L+   
Sbjct: 413 VIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYG 472

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            + DI  +N L+ GLC   R + A +L  ++       D  T+N +I +LC  G + +A
Sbjct: 473 CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQA 531



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 110/391 (28%), Positives = 193/391 (49%), Gaps = 31/391 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  L  ++R  GCEP++ TYN LIN +C  G    ALN+  ++ +   +   V      
Sbjct: 215 QAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVL 274

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C P+ VT+ TI+  LC++G VD+A ++   M +    
Sbjct: 275 KSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCI 334

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++VTY+S++ G C     ++A  L   +   G +P+ +++  ++  LC   + + A  L
Sbjct: 335 PDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEEL 394

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M+     P+   +NT++   C  G V+RA ++   M   GC  ++ +Y+ +I+G C 
Sbjct: 395 MAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + I+ A+ L S + S G KPD+V +NTL  GL  + + E A +L   M       D   
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATT 514

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + T I  LC+ G +++A+E  + +       +   YN ++D L K+G+ + A +L   + 
Sbjct: 515 FNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMT 574

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            G    D++TYN +I  +   GKM++A DL 
Sbjct: 575 NGT--PDLITYNTVISNITKAGKMEEALDLL 603



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 174/350 (49%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ FT+N LI  LC  G    AL +F++M +        C P+ VTY+ ++D  CK    
Sbjct: 160 PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRG------CSPSVVTYSILLDATCKASGY 213

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  L  +M+ +   P++VTYN LI+  C   D +EA  +  ++   G +P+ V++  +
Sbjct: 214 RQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPV 273

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC + +  E   L   M      P+   +NT++   C  G V+RA ++   M   GC
Sbjct: 274 LKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGC 333

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +YS +++G C    ++ A+ L S + S G KPD + Y T+  GL  I Q E A +
Sbjct: 334 IPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEE 393

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  EM       D   + T I  LC+ G +  A+++   +       DI  YN +IDGLC
Sbjct: 394 LMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLC 453

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               +  A EL  +L       D+VT+N ++  LC+  + + A  L ++M
Sbjct: 454 NERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNM 503



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 180/361 (49%), Gaps = 12/361 (3%)

Query: 11  RVF---GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           RVF   G    V TYNT++NG CR G    A  L           G+   P+T T+  +I
Sbjct: 119 RVFATLGASATVVTYNTMVNGYCRAGRIEDARRLIS---------GMPFPPDTFTFNPLI 169

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
             LC  G V  A  +F  M     +P+VVTY+ L+   C A+ + +A  L  EM  +G +
Sbjct: 170 RALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCE 229

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P++V++NV++N +C  G +DEA  +L  +   G +P+A  Y  ++   C + R    EEL
Sbjct: 230 PDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEEL 289

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M S  C  +  +++ ++   C+   ++ A+ +   M   G  PD+V Y+++  GL +
Sbjct: 290 FAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCD 349

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           + +V+ A +L   ++ +G   DT AY T + GLC       A EL   +       D   
Sbjct: 350 VGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVT 409

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +N +I  LC+ G +  A ++   +       D+VTYN +I  LC +  +D A +L  +++
Sbjct: 410 FNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQ 469

Query: 368 A 368
           +
Sbjct: 470 S 470



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 190/365 (52%), Gaps = 8/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +L+ +GC+P+   Y T++ GLC       A  L  EM   +      C P+ V
Sbjct: 355 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSD------CPPDEV 408

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I  LC++G VD+A ++  +M +   NP++VTYNS+I G C     ++A  L   +
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++V+FN ++  LC   + ++A +L+  M+     P+A  +NT++   C  G +
Sbjct: 469 QSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLL 528

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E    M   GC  N  +Y+I+++   K  + + AL L S M +    PD++ YNT+
Sbjct: 529 LQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTV 586

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              + +  ++E A  L   M  +G++ DT  YR+   G+C+      A+ +   L+ +  
Sbjct: 587 ISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGL 646

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN ++ G C++ R  IA + F  +     + D  TY I++ AL  +  +D+A+ 
Sbjct: 647 SPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQ 706

Query: 362 LFLDM 366
           L +++
Sbjct: 707 LLVNL 711



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 109/230 (47%), Gaps = 6/230 (2%)

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV  N+++  LC  G++ +A R+      +G       YNT+++G+C  GR+  A  L  
Sbjct: 98  VVPCNILIKRLCSGGRVADAERVFA---TLGASATVVTYNTMVNGYCRAGRIEDARRL-- 152

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +  M    + F+++ LI   C    +  AL+++ +ML +G  P VV Y+ L     +  
Sbjct: 153 -ISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKAS 211

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
              +A  L DEM+  G   D   Y   I+ +C  G + EA+ +   L     + D   Y 
Sbjct: 212 GYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYT 271

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++  LC S R K   ELF  +       D VT+N ++ +LC  G +D+A
Sbjct: 272 PVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRA 321



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 8/230 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L + +    C P+  T+NT+I  LC+ G  + A+   + MA  NG     C PN  
Sbjct: 495 DAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAE-NG-----CIPNQS 548

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D L K G   +A +L   M   N  P+++TYN++I     A    EA  L   M
Sbjct: 549 TYNIVVDALLKAGKTQEALKLLSGMT--NGTPDLITYNTVISNITKAGKMEEALDLLRVM 606

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+ +++  +   +C+    D A R+L  +  +G+ P+A  YN ++ GFC   R 
Sbjct: 607 VSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRT 666

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + A + F  M S GC  +  +Y IL+        ++ A  L   + S G+
Sbjct: 667 DIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 6/151 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ TYNT+I+ + + G    AL+L   M + NG       P+T+TY ++  G+C+E   
Sbjct: 578 PDLITYNTVISNITKAGKMEEALDLLRVMVS-NG-----LSPDTITYRSLAYGICREDGT 631

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  +  +++D  ++P+   YN ++ GFC     + A   F  M+  G  P+  ++ ++
Sbjct: 632 DRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIIL 691

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           +  L     +DEA +LL  +  +GV   + +
Sbjct: 692 LEALAYECLLDEAKQLLVNLCSLGVLDKSLI 722



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 212 KNKEIEGALSLYSEMLSKG-----IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + +EI+ AL+L   + S G     +   VV  N L   L    +V  A ++F  +   G 
Sbjct: 70  QREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL---GA 126

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           +A    Y T ++G C+ G I +A    R +  + +  D   +N LI  LC  GR+  A  
Sbjct: 127 SATVVTYNTMVNGYCRAGRIEDA---RRLISGMPFPPDTFTFNPLIRALCVRGRVPDALA 183

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +F  +        VVTY+I++ A C      +A  L  +M AK
Sbjct: 184 VFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAK 226


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/393 (32%), Positives = 197/393 (50%), Gaps = 29/393 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NG--------NGEFG 53
           A  +F ++   G  PNV+TYN LI G C  G+  + L  F EM  NG        N    
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246

Query: 54  VVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
             CK                    PN ++Y  +I+GLC+EG + +  E+  +M      P
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVP 306

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + VT+N+LI+G+C   ++++A  L  EM+  G+ PNVV++  ++N +CK G ++ A   L
Sbjct: 307 DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFL 366

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G+ PN   Y TL+DGF   G + +A ++   M   G    + +Y+ LING+C  
Sbjct: 367 DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCIL 426

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +E A  L  EM+ +G  PDVV Y+T+  G     ++E+AF+L  EM   G++ D   Y
Sbjct: 427 GRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATY 486

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            + I GLCK   + E  +LF+ +  L    D   Y  LI+  C  G L  A  L   + +
Sbjct: 487 SSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQ 546

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                D+VTYN++I+      +  +A+ L L +
Sbjct: 547 KGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 193/369 (52%), Gaps = 29/369 (7%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  T+NTLING C  G+   AL L  EM   NG       PN VTYTT+I+ +CK G +
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVK-NG-----LSPNVVTYTTLINSMCKAGNL 359

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A E   +M+D  ++PN  TY +LI GF       +A  +  EM++ G  P ++++N +
Sbjct: 360 NRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNAL 419

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  C  G+M++AS LL+ MI+ G  P+   Y+T++ GFC    + +A +L V M + G 
Sbjct: 420 INGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGI 479

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +YS LI G CK + +     L+ EMLS G+ PD V Y +L         +++A +
Sbjct: 480 SPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALR 539

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR---AYNCLID 313
           L DEM + G + D   Y   I+G  K     EA  L   L++L YE  +     YN LID
Sbjct: 540 LHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLL--LKLL-YEESVPNEITYNTLID 596

Query: 314 ---------------GLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMD 357
                          G C  G +  A  +  S L +G  + + V YN++IH     G ++
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV-YNVIIHGHSKVGNIE 655

Query: 358 KARDLFLDM 366
           KA +L+ +M
Sbjct: 656 KAYNLYKEM 664



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/369 (29%), Positives = 189/369 (51%), Gaps = 21/369 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV TY TLIN +C+ G+   A+   ++M +          PN  
Sbjct: 326 QALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRG------LHPNGR 379

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+IDG  ++GF+ +A ++  +M +    P ++TYN+LI+G C      +A  L  EM
Sbjct: 380 TYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEM 439

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+VVS++ I++  C+N ++++A +L   M+  G+ P+   Y++L+ G C   R+
Sbjct: 440 IERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRL 499

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +LF  M S+G   +  +Y+ LIN YC   +++ AL L+ EM+ KG  PD+V YN L
Sbjct: 500 GEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVL 559

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID---------------GLCKNGYI 286
             G  +  + + A +L  ++       +   Y T ID               G C  G +
Sbjct: 560 INGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLM 619

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA  +  ++    Y+L+   YN +I G  K G ++ A+ L++ +         VT   +
Sbjct: 620 NEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMAL 679

Query: 347 IHALCADGK 355
             +L  +GK
Sbjct: 680 AKSLYHEGK 688



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 169/313 (53%), Gaps = 1/313 (0%)

Query: 58  PNTVTYTTIIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           P  ++Y  I+D + + +  V  A+ +F +M +  ++PNV TYN LI GFC A +      
Sbjct: 165 PGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLF 224

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            F EM   G  PNVV++N I++  CK  K+ EA +LL LM   G+ PN   YN +++G C
Sbjct: 225 FFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLC 284

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G++    E+   M       +  +++ LINGYC       AL L++EM+  G+ P+VV
Sbjct: 285 REGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVV 344

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y TL   + +   + RA +  D+M+  G+  +   Y T IDG  + G++ +A ++ + +
Sbjct: 345 TYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEM 404

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               +   I  YN LI+G C  GR++ A  L + +     I DVV+Y+ +I   C + ++
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQEL 464

Query: 357 DKARDLFLDMEAK 369
           +KA  L ++M AK
Sbjct: 465 EKAFQLKVEMVAK 477



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 145/296 (48%), Gaps = 23/296 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P + TYN LING C  G    A  L +EM     E G +  P+ V+Y+TII G C+ 
Sbjct: 408 GFTPTIITYNALINGHCILGRMEDASGLLQEMI----ERGFI--PDVVSYSTIISGFCRN 461

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             ++KA +L ++M  + I+P+V TY+SLI G C      E   LF EM+  G+ P+ V++
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N  C  G +D+A RL + MIQ G  P+   YN L++GF    R   A+ L + +  
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYS----------------EMLSKGIKPDVVI 237
                N  +Y+ LI+  C N E + AL+L                   ML KG K +  +
Sbjct: 582 EESVPNEITYNTLIDN-CNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV 640

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           YN +  G  ++  +E+A+ L+ EM   G A  +         L   G  VE  +L 
Sbjct: 641 YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLL 696



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 70/165 (42%), Gaps = 31/165 (18%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNL-----FEEMANGNGEFGVVCKPNTVTYTTIID 68
           G  P++ TYN LING  +   T  A  L     +EE             PN +TY T+ID
Sbjct: 548 GFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESV-----------PNEITYNTLID 596

Query: 69  ---------------GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
                          G C +G +++A  +   M  +    N   YN +IHG     +  +
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           A  L+ EM+  G  P+ V+   +   L   GK  E ++LL+  ++
Sbjct: 657 AYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLK 701


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 195/387 (50%), Gaps = 29/387 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA  L   L  FGCEP+V +YN ++ GLC          L EEM                
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 48  ----GNGEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                NG F  V           C P+   Y TIIDG+CKEG ++ A E+  +M    + 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVV YN+L+ G C A  W E + L  EM D+    + V+FN++++  C+NG +D    L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M++ G  P+   Y T+++GFC  G ++ A  L  SM + GCK N  SY+I++ G C 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +    A  L S+M+ +G   + + +NTL   L +   VE+A +L  +M  +G + D  +
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T IDGL K G   EA+EL   +       +   Y+ +   L + GR+    ++F ++ 
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 569

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKA 359
              + +D V YN +I +LC  G+ ++A
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERA 596



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 180/366 (49%), Gaps = 8/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A A+  ++   GC P    Y+ ++   CR G    A+ + E++ A G       C  + 
Sbjct: 140 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-------CALDV 192

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
                +++ +C +G VD+A  L   +      P+VV+YN+++ G C A  W   + L  E
Sbjct: 193 GNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEE 252

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     PN+V+FN +++ LC+NG  +    +L  M++ G  P+  +Y T++DG C  G 
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 312

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A E+   M S G K NV  Y+ L+ G C  +  E    L +EM  K    D V +N 
Sbjct: 313 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +   V+R  +L ++M   G   D   Y T I+G CK G I EAV L +++    
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +  +Y  ++ GLC + R   A +L   + +     + +T+N +I+ LC  G +++A 
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492

Query: 361 DLFLDM 366
           +L   M
Sbjct: 493 ELLKQM 498



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 29/323 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF---------- 52
           A  +  ++  +G +PNV  YNTL+ GLC          L  EM + +             
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375

Query: 53  -----GVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                G+V              C P+ +TYTT+I+G CKEG +D+A  L   M      P
Sbjct: 376 FFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N ++Y  ++ G C A  W +A+ L  +M+ QG   N ++FN ++N LCK G +++A  LL
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M+  G  P+   Y+T++DG    G+ + A EL   M + G   N   YS + +   + 
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 555

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             I   + ++  +    I+ D V+YN +   L +  + ERA +    M   G   +   Y
Sbjct: 556 GRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTY 615

Query: 274 RTFIDGLCKNGYIVEAVELFRTL 296
              I GL   G++ EA E+   L
Sbjct: 616 TILIRGLASEGFVKEAQEMLTEL 638



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 156/347 (44%), Gaps = 9/347 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           YN ++ G CR G    A  L            V   PN  TY  ++  LC  G +  A  
Sbjct: 93  YNAMVAGYCRAGQLESARRLAA---------AVPVPPNAYTYFPVVRALCARGRIADALA 143

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +  +M      P    Y+ ++   C    +  A  +  ++  +G   +V + N+++N +C
Sbjct: 144 VLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAIC 203

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
             G +DEA  LL  +   G  P+   YN ++ G C+  R    +EL   M  M C  N+ 
Sbjct: 204 DQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV 263

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +++ LI+  C+N   E    + ++M+  G  PD+ +Y T+  G+ +   +E A ++ + M
Sbjct: 264 TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 323

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
             +G+  +   Y T + GLC      E  EL   +      LD   +N L+D  C++G +
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
               EL   +     + DV+TY  +I+  C +G +D+A  L   M A
Sbjct: 384 DRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 136/253 (53%), Gaps = 8/253 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK- 72
           GC P+V TY T+ING C+ G    A+ L + M          CKPNT++YT ++ GLC  
Sbjct: 397 GCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT------ACGCKPNTISYTIVLKGLCSA 450

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           E +VD A++L  +M  +    N +T+N+LI+  C      +A  L  +M+  G  P+++S
Sbjct: 451 ERWVD-AEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 509

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ +++ L K GK DEA  LL +M+  G+ PN  +Y+++       GR+N+  ++F +++
Sbjct: 510 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 569

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               + +   Y+ +I+  CK  E E A+   + M+S G  P+   Y  L  GL     V+
Sbjct: 570 DTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVK 629

Query: 253 RAFKLFDEMQRHG 265
            A ++  E+   G
Sbjct: 630 EAQEMLTELCSKG 642



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC  N  T+NTLIN LC+ G    A+ L ++M  NG       C P+
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 506

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  D+A EL   M ++ ++PN + Y+S+          N+   +F 
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK G+ + A   L  M+  G  PN   Y  L+ G    G
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 626

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 627 FVKEAQEMLTELCSKGALRKHLMKHFGIV 655


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 193/371 (52%), Gaps = 8/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGH------TIVALNLFEEMANGNGEFGVV 55
           E   L  KL  FGCEP++ +YN ++ GLC           +V +    E  +   E G  
Sbjct: 196 EGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHG-- 253

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C P+   Y TIIDG+CK+G  + A ++  +M    + PNVV YN+++ G C A  W EA+
Sbjct: 254 CTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAE 313

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  EM  +    + V+FN++++  C+NG +D    LLE M++ G  P+   Y T+++GF
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGF 373

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G V+ A  L  +M + GCK N  SY+I++ G C+ +    A  L S M+ +G  P+ 
Sbjct: 374 CKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNP 433

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V +NTL   + +    E+A +L  +M  +G + D  +Y T IDGL K G   EA+EL   
Sbjct: 434 VTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNV 493

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +       +   Y+ +   L + GR     ++F S+    + +D   YN +I +LC   +
Sbjct: 494 MINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWE 553

Query: 356 MDKARDLFLDM 366
            D+A D F  M
Sbjct: 554 TDRAIDFFAYM 564



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 186/421 (44%), Gaps = 74/421 (17%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMA-------------------NGNGEFGVV-- 55
           PN +TY  ++  LC  G    AL + +EM                     G G    V  
Sbjct: 106 PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRA 165

Query: 56  --------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
                   C  ++     ++  +C++G VD+  EL  K+      P++V+YN+++ G C 
Sbjct: 166 LQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCM 225

Query: 108 ANDWNEAKCLFIEMM----------DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           A  W++ + L +EM+          + G  P++  +  I++ +CK+G  + A+ +L  M 
Sbjct: 226 AKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMP 285

Query: 158 QIGVRPNAFVYNTLMDG-----------------------------------FCLTGRVN 182
             G++PN   YNT++ G                                   FC  G V+
Sbjct: 286 SYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVD 345

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           R  EL   M   GC  +V +Y+ +ING+CK   ++ A+ L   M + G KP+ + Y  + 
Sbjct: 346 RVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVL 405

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL    +   A +L   M + G   +   + T I+ +CK G   +A+EL + + +    
Sbjct: 406 KGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCS 465

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+ +Y+ +IDGL K+G+ + A EL   +    +  + + Y+ M  AL  +G+ DK   +
Sbjct: 466 PDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQM 525

Query: 363 F 363
           F
Sbjct: 526 F 526



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 143/295 (48%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++    C  +  T+N L++  C+ G     + L E+M     E G  C P+ +
Sbjct: 311 EAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQML----EHG--CIPDVI 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I+G CKEG VD+A  L   M      PN ++Y  ++ G C A  W +A+ L   M
Sbjct: 365 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  PN V+FN ++N +CK G  ++A  LL+ M+  G  P+   Y+T++DG    G+ 
Sbjct: 425 IQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M + G   N   YS + +   +    +  + ++  +    ++ D  +YN +
Sbjct: 485 EEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAV 544

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  + +RA   F  M  +G   +   Y   I GL   G + EA +L   L
Sbjct: 545 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 599



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 165/402 (41%), Gaps = 54/402 (13%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L   G    V  YN +I G CR G    A  L            V   PN  TY  I+  
Sbjct: 67  LDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAA---------VPVPPNAYTYFPIVRS 117

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC  G +  A  +  +M            + ++   C    +  A      +  +G   +
Sbjct: 118 LCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKGCTLD 177

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
             + N++++ +C+ G +DE   LL  +   G  P+   YN ++ G C+  R +  EEL V
Sbjct: 178 SGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMV 237

Query: 190 ----------SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
                      M   GC  ++  Y+ +I+G CK+   E A  + S M S G+KP+VV YN
Sbjct: 238 EMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYN 297

Query: 240 TLFIGLFEIHQ-----------------------------------VERAFKLFDEMQRH 264
           T+  GL    +                                   V+R  +L ++M  H
Sbjct: 298 TVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 357

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D   Y T I+G CK G + EAV L + +     + +  +Y  ++ GLC++ R   A
Sbjct: 358 GCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDA 417

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            EL   + +   + + VT+N +I+ +C  G  ++A +L   M
Sbjct: 418 QELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQM 459



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 68/228 (29%), Positives = 117/228 (51%), Gaps = 6/228 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC+PN  +Y  ++ GLCR    + A  L   M          C PN V
Sbjct: 381 EAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQG------CLPNPV 434

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I+ +CK+G  ++A EL  +M     +P++++Y+++I G   A    EA  L   M
Sbjct: 435 TFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVM 494

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ PN + ++ + + L + G+ D+  ++ + +    VR +A +YN ++   C     
Sbjct: 495 INKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWET 554

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           +RA + F  M S GC  N  +Y+ILI G      +  A  L SE+ S+
Sbjct: 555 DRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSR 602



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 149/356 (41%), Gaps = 22/356 (6%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           + LI  LC  G T  A    +   +  G          V Y  +I G C+ G V  A+ L
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAG---------VVAYNAMIAGYCRAGQVAAARRL 98

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
              +    + PN  TY  ++   C      +A  +  EM  +G        +VI+   C+
Sbjct: 99  AAAVP---VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACR 155

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
            G    A R L+++   G   ++   N ++   C  G V+   EL   + S GC+ ++ S
Sbjct: 156 GGGFRSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVS 215

Query: 203 YSILINGYCKNKEIEGALSL----------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           Y+ ++ G C  K  +    L           S+M   G  PD+ +Y T+  G+ +    E
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHE 275

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  +   M  +G+  +   Y T + GLC      EA +L   +      LD   +N L+
Sbjct: 276 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILV 335

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           D  C++G +    EL   +     I DV+TY  +I+  C +G +D+A  L  +M A
Sbjct: 336 DFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSA 391



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 102/209 (48%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L   +   GC PN  T+NTLIN +C+ G    A+ L ++M  NG       C P+
Sbjct: 415 VDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG-------CSPD 467

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  ++A EL   M ++ I PN + Y+S+          ++   +F 
Sbjct: 468 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFD 527

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  V+ +   +N +++ LCK  + D A      M+  G  PN   Y  L+ G    G
Sbjct: 528 SIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEG 587

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
            V  A++L   + S     KH V  + I+
Sbjct: 588 LVREAQDLLSELCSRRAVRKHLVRHFGIV 616


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 191/351 (54%), Gaps = 6/351 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+V TYNT++  LC +G    A+ + + M   +      C P+ +TYT +I+  C++  
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSG 254

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V +A +L  +M+D    P+VVTYN L++G C     +EA     +M   G QPNV++ N+
Sbjct: 255 VGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I+  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++   M   G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG 374

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+ N  SY+ L++G+CK K+++ A+     M+S+G  PD+V YNT+   L +  +VE A 
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++ +++   G +     Y T IDGL K G   +A++L   +R    + D   Y+ L+ GL
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + G++  A + F    R  +  + VT+N ++  LC   + D+A D  + M
Sbjct: 495 SREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYM 545



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 191/366 (52%), Gaps = 9/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   L   G  P+V TYN +I+G C+ G    AL++ + M+           P+ V
Sbjct: 155 KAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---------VSPDVV 205

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TI+  LC  G + +A E+  +M   +  P+V+TY  LI   C  +   +A  L  EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEM 265

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VV++NV++N +CK G++DEA + L  M   G +PN   +N ++   C TGR 
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L   M   G   +V +++ILIN  C+   +  A+ +  +M   G +P+ + YN L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPL 385

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++RA +  + M   G   D   Y T +  LCK+G + +AVE+   L     
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  YN +IDGL K+G+   A +L   +    L  D +TY+ ++  L  +GK+D+A  
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505

Query: 362 LFLDME 367
            F + E
Sbjct: 506 FFHEFE 511



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 156/324 (48%), Gaps = 29/324 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           +A  L  ++R  GC P+V TYN L+NG+C+ G    A+    +M +   +  V+      
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    P+ VT+  +I+ LC++G + +A ++  KM      
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ 376

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN ++YN L+HGFC     + A      M+ +G  P++V++N ++  LCK+GK+++A  +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G  P    YNT++DG    G+  +A +L   M +   K +  +YS L+ G  +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A+  + E    G++P+ V +N++ +GL +  Q +RA      M   G      +
Sbjct: 497 EGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETS 556

Query: 273 YRTFIDGLCKNGYIVEAVELFRTL 296
           Y   I+GL   G   EA+EL   L
Sbjct: 557 YTILIEGLAYEGMAKEALELLNEL 580



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 142/272 (52%), Gaps = 6/272 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   G  P+V T+N LIN LCR G    A+++ E+M          C+PN+
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHG------CQPNS 379

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G CKE  +D+A E   +M      P++VTYN+++   C      +A  +  +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK  +A +LL+ M    ++P+   Y++L+ G    G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A + F   E MG + N  +++ ++ G CK ++ + A+     M+++G KP    Y  
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           L  GL      + A +L +E+   G+   + A
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKRSSA 591



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 128/239 (53%), Gaps = 3/239 (1%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V  N  + +L + G+++E  + LE M+  G  P+     TL+ GFC  G+  +A ++   
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           +E  G   +V +Y+++I+GYCK  EI  ALS+   M    + PDVV YNT+   L +  +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           +++A ++ D M +     D   Y   I+  C++  + +A++L   +R      D+  YN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNV 279

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L++G+CK GRL  A +    +P      +V+T+NI++ ++C+ G+   A  L  DM  K
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 195/387 (50%), Gaps = 29/387 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA  L   L  FGCEP+V +YN ++ GLC          L EEM                
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 48  ----GNGEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                NG F  V           C P+   Y TIIDG+CKEG ++ A E+  +M    + 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVV YN+L+ G C A  W E + L  EM D+    + V+FN++++  C+NG +D    L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M++ G  P+   Y T+++GFC  G ++ A  L  SM + GCK N  SY+I++ G C 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            +    A  L S+M+ +G   + + +NTL   L +   VE+A +L  +M  +G + D  +
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLIS 546

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T IDGL K G   EA+EL   +       +   Y+ +   L + GR+    ++F ++ 
Sbjct: 547 YSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNIQ 606

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKA 359
              + +D V YN +I +LC  G+ ++A
Sbjct: 607 DTTIRSDAVLYNAVISSLCKRGETERA 633



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 181/366 (49%), Gaps = 8/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A A+  ++   GC P    Y+ ++   CR G    A+ + E++ A G       C  + 
Sbjct: 177 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-------CALDV 229

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
                +++ +C +G VD+A  L   +      P+VV+YN+++ G C A  W   + L  E
Sbjct: 230 GNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEE 289

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     PN+V+FN +++ LC+NG  +    +L  M++ G  P+  +Y T++DG C  G 
Sbjct: 290 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGH 349

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A E+   M S G K NV  Y+ L+ G C  +  E    L +EM  K    D V +N 
Sbjct: 350 LEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 409

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +   V+R  +L ++M  HG   D   Y T I+G CK G I EAV L +++    
Sbjct: 410 LVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 469

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +  +Y  ++ GLC + R   A +L   + +     + +T+N +I+ LC  G +++A 
Sbjct: 470 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 529

Query: 361 DLFLDM 366
           +L   M
Sbjct: 530 ELLKQM 535



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 29/323 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF---------- 52
           A  +  ++  +G +PNV  YNTL+ GLC          L  EM + +             
Sbjct: 353 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 412

Query: 53  -----GVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                G+V              C P+ +TYTT+I+G CKEG +D+A  L   M      P
Sbjct: 413 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 472

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N ++Y  ++ G C A  W +A+ L  +M+ QG   N ++FN ++N LCK G +++A  LL
Sbjct: 473 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 532

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M+  G  P+   Y+T++DG    G+ + A EL   M + G   N   YS + +   + 
Sbjct: 533 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 592

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             I   + ++  +    I+ D V+YN +   L +  + ERA +    M   G   +   Y
Sbjct: 593 GRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTY 652

Query: 274 RTFIDGLCKNGYIVEAVELFRTL 296
              I GL   G++ EA E+   L
Sbjct: 653 TILIRGLASEGFVKEAQEMLTEL 675



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 156/347 (44%), Gaps = 9/347 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           YN ++ G CR G    A  L            V   PN  TY  ++  LC  G +  A  
Sbjct: 130 YNAMVAGYCRAGQLESARRLAA---------AVPVPPNAYTYFPVVRALCARGRIADALA 180

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +  +M      P    Y+ ++   C    +  A  +  ++  +G   +V + N+++N +C
Sbjct: 181 VLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAIC 240

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
             G +DEA  LL  +   G  P+   YN ++ G C+  R    +EL   M  M C  N+ 
Sbjct: 241 DQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV 300

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +++ LI+  C+N   E    + ++M+  G  PD+ +Y T+  G+ +   +E A ++ + M
Sbjct: 301 TFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 360

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
             +G+  +   Y T + GLC      E  EL   +      LD   +N L+D  C++G +
Sbjct: 361 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 420

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
               EL   +     + DV+TY  +I+  C +G +D+A  L   M A
Sbjct: 421 DRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 467



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 139/262 (53%), Gaps = 8/262 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+V TY T+ING C+ G    A+ L + M          CKPNT++YT 
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT------ACGCKPNTISYTI 479

Query: 66  IIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++ GLC  E +VD A++L  +M  +    N +T+N+LI+  C      +A  L  +M+  
Sbjct: 480 VLKGLCSAERWVD-AEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 538

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+++S++ +++ L K GK DEA  LL +M+  G+ PN  +Y+++       GR+N+ 
Sbjct: 539 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 598

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ++F +++    + +   Y+ +I+  CK  E E A+   + M+S G  P+   Y  L  G
Sbjct: 599 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 658

Query: 245 LFEIHQVERAFKLFDEMQRHGV 266
           L     V+ A ++  E+   G 
Sbjct: 659 LASEGFVKEAQEMLTELCSKGA 680



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC  N  T+NTLIN LC+ G    A+ L ++M  NG       C P+
Sbjct: 491 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 543

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  D+A EL   M ++ ++PN + Y+S+          N+   +F 
Sbjct: 544 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 603

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK G+ + A   L  M+  G  PN   Y  L+ G    G
Sbjct: 604 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 663

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 664 FVKEAQEMLTELCSKGALRKHLMKHFGIV 692


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 190/351 (54%), Gaps = 6/351 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+V TYNT++  LC +G    A+ + + M   +      C P+ +TYT +I+  C++  
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSG 254

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V  A +L  +M+D    P+VVTYN L++G C     +EA     +M   G QPNV++ N+
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I+  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + RA ++   M   G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+ N  SY+ L++G+CK K+++ A+     M+S+G  PD+V YNT+   L +  +VE A 
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++ +++   G +     Y T IDGL K G   +A++L   +R    + D   Y+ L+ GL
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + G++  A + F    R  +  + VT+N ++  LC   + D+A D  + M
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545



 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 190/366 (51%), Gaps = 9/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   L   G  P+V TYN +I+G C+ G    AL++ + M+           P+ V
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---------VSPDVV 205

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TI+  LC  G + +A E+  +M   +  P+V+TY  LI   C  +    A  L  EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VV++NV++N +CK G++DEA + L  M   G +PN   +N ++   C TGR 
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+L   M   G   +V +++ILIN  C+   +  A+ +  +M   G +P+ + YN L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  +++RA +  + M   G   D   Y T +  LCK+G + +AVE+   L     
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  YN +IDGL K+G+   A +L   +    L  D +TY+ ++  L  +GK+D+A  
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505

Query: 362 LFLDME 367
            F + E
Sbjct: 506 FFHEFE 511



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 29/323 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------ 56
           A  L  ++R  GC P+V TYN L+NG+C+ G    A+    +M +   +  V+       
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317

Query: 57  -----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                   P+ VT+  +I+ LC++G + +A ++  KM      P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N ++YN L+HGFC     + A      M+ +G  P++V++N ++  LCK+GK+++A  +L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             +   G  P    YNT++DG    G+  +A +L   M +   K +  +YS L+ G  + 
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +++ A+  + E    GI+P+ V +N++ +GL +  Q +RA      M   G   +  +Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557

Query: 274 RTFIDGLCKNGYIVEAVELFRTL 296
              I+GL   G   EA+EL   L
Sbjct: 558 TILIEGLAYEGMAKEALELLNEL 580



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 144/272 (52%), Gaps = 6/272 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   G  P+V T+N LIN LCR G    A+++ E+M          C+PN+
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNS 379

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G CKE  +D+A E   +M      P++VTYN+++   C      +A  +  +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK  +A +LL+ M    ++P+   Y++L+ G    G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A + F   E MG + N  +++ ++ G CK+++ + A+     M+++G KP+   Y  
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           L  GL      + A +L +E+   G+   + A
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 72/239 (30%), Positives = 127/239 (53%), Gaps = 3/239 (1%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V  N  + ++ + G+++E  + LE M+  G  P+     TL+ GFC  G+  +A ++   
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           +E  G   +V +Y+++I+GYCK  EI  ALS+   M    + PDVV YNT+   L +  +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           +++A ++ D M +     D   Y   I+  C++  +  A++L   +R      D+  YN 
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L++G+CK GRL  A +    +P      +V+T+NI++ ++C+ G+   A  L  DM  K
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/362 (34%), Positives = 197/362 (54%), Gaps = 6/362 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L  ++   G +PN++TY   I  L R G    A  + + M +        C P+ VTYT
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDG------CGPDVVTYT 303

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +ID LC  G +D A ELF+KMK  +  P+ VTY +++  F    D    K  + EM   
Sbjct: 304 VLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEAD 363

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+V++F +++N LCK G +DEA  LL++M + GV PN   YNTL+ G     R++ A
Sbjct: 364 GYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDA 423

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +LF +ME++G     ++Y + I+ Y K+   + AL  + +M  +GI P++V  N     
Sbjct: 424 LDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYS 483

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L E+ ++  A  +F+ ++ +G+A D+  Y   +    K G + EA+EL   +   + E D
Sbjct: 484 LAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPD 543

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I   N LI+ L K+GR+  AW++F  L    L   VVTYN +I  L  +G++ +A +LF 
Sbjct: 544 IIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFA 603

Query: 365 DM 366
            M
Sbjct: 604 SM 605



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 176/333 (52%), Gaps = 7/333 (2%)

Query: 3    AAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A ++F++  +  G +P + +YN LI G     +  +A NLF EM N        C P+  
Sbjct: 773  AQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG------CAPDVF 826

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY  ++D   K G +++  EL+ +M   +  PN +T+N +I     +N  ++A  LF ++
Sbjct: 827  TYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDL 886

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +     P   ++  +++ L K+G+++EA  L E M+  G RPN  +YN L++GF  TG V
Sbjct: 887  VSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDV 946

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            N A ELF  M   G + ++ SY+ L+   C+   ++ AL  + ++   G+  D + YN +
Sbjct: 947  NTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLM 1006

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              GL   H++E A  L+DEMQ  G+  D + Y + I  L   G + +A +L+  L+ +  
Sbjct: 1007 IDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGL 1066

Query: 302  ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
            E ++  YN LI G   SG    A+ +++ +  G
Sbjct: 1067 EPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVG 1099



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 182/361 (50%), Gaps = 6/361 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F K+R  G   N ++YN LI+ L ++G    AL ++  M           KP+  T++ +
Sbjct: 182 FGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEG------LKPSLKTFSAL 235

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           +    K    +  K L  +M+   + PN+ TY   I     A   +EA  +   M D G 
Sbjct: 236 MVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGC 295

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            P+VV++ V+++ LC  GK+D+A  L   M     +P+   Y T++D F   G + R +E
Sbjct: 296 GPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKE 355

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
            +  ME+ G   +V +++IL+N  CK   I+ A  L   M  +G+ P++  YNTL  GL 
Sbjct: 356 FWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLL 415

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
            +++++ A  LF+ M+  GV    + Y  FID   K+G   +A+E F  ++I     +I 
Sbjct: 416 RVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIV 475

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A N  +  L + GRL+ A  +F  L    L  D VTYN+M+      G++D+A +L  DM
Sbjct: 476 ACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDM 535

Query: 367 E 367
            
Sbjct: 536 S 536



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   GC P+V TY  LI+ LC  G    A+ LF +M   +       KP+ V
Sbjct: 282 EACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSH------KPDRV 335

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D     G + + KE + +M+ +   P+V+T+  L++  C A + +EA  L   M
Sbjct: 336 TYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM 395

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QGV PN+ ++N +++ L +  ++D+A  L   M  +GV P A+ Y   +D +  +GR 
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRS 455

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A E F  M+  G   N+ + +  +    +   +  A  +++ + S G+ PD V YN +
Sbjct: 456 DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +  QV+ A +L  +M  +    D     + I+ L K G + EA ++F  L+ +K 
Sbjct: 516 MKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKL 575

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  YN LI GL K G+++ A ELF S+       + +T+N ++  LC + ++D A  
Sbjct: 576 APTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALK 635

Query: 362 LFLDM 366
           +   M
Sbjct: 636 MLYKM 640



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 173/342 (50%), Gaps = 5/342 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
            +I  LC+    +VA ++F        E GV  KP   +Y  +I+G       + A  LF 
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTK---ELGV--KPTLESYNFLIEGFLGVHNDEMAWNLFT 814

Query: 85   KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
            +MK+    P+V TYN L+     +   NE   L+ +M+    +PN ++ N+I+  L K+ 
Sbjct: 815  EMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSN 874

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             +D+A  L   ++     P    Y  L+DG   +GR+  A+ELF  M   GC+ N   Y+
Sbjct: 875  SLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYN 934

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILING+ K  ++  A  L+  M+ +GI+PD+  Y +L   L E  +V+ A   F+++++ 
Sbjct: 935  ILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQT 994

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            G+  D+ AY   IDGL ++  I EA+ L+  ++      D+  YN LI  L  +G ++ A
Sbjct: 995  GLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQA 1054

Query: 325  WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             +L+  L    L  +V TYN +I      G  D A  ++  M
Sbjct: 1055 GKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRM 1096



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 164/316 (51%), Gaps = 2/316 (0%)

Query: 53   GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDW 111
            G VCK  +V    II  LCK      A+ +F++   E  + P + +YN LI GF   ++ 
Sbjct: 748  GRVCKDGSV-LMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHND 806

Query: 112  NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
              A  LF EM + G  P+V ++N++++   K+GK++E   L E MI    +PN   +N +
Sbjct: 807  EMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNII 866

Query: 172  MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
            +     +  +++A +LF  + S        +Y  L++G  K+  +E A  L+ EM+  G 
Sbjct: 867  IANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGC 926

Query: 232  KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            +P+  IYN L  G  +   V  A +LF  M R G+  D  +Y + +  LC+ G + +A+ 
Sbjct: 927  RPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALH 986

Query: 292  LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
             F  L+     LD  AYN +IDGL +S R++ A  L+  +    +  D+ TYN +I  L 
Sbjct: 987  YFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLG 1046

Query: 352  ADGKMDKARDLFLDME 367
              G +++A  L+ +++
Sbjct: 1047 VAGMVEQAGKLYEELQ 1062



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 187/399 (46%), Gaps = 44/399 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF  +   GC PN  T+NT+++ LC+     +AL +  +M   N      C P+ +
Sbjct: 597 RAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMN------CMPDVL 650

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG----------FCYANDW 111
           T+ TII GL  E  V  A  LF +MK + + P+ VT  +L+ G          F  A D+
Sbjct: 651 TFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDF 709

Query: 112 NEAKCLFIE----------MMDQGVQPNVVSF--NVIMNELCKNG-----------KMDE 148
                ++++          ++ Q      + F   ++   +CK+G           K  +
Sbjct: 710 VHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQ 769

Query: 149 A----SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           A    S  +    ++GV+P    YN L++GF        A  LF  M++ GC  +VF+Y+
Sbjct: 770 ALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYN 829

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +L++ + K+ +I     LY +M+    KP+ + +N +   L + + +++A  LF ++   
Sbjct: 830 LLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSG 889

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
             +     Y   +DGL K+G + EA ELF  +       +   YN LI+G  K+G +  A
Sbjct: 890 DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTA 949

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ELF+ + R  +  D+ +Y  ++  LC  G++D A   F
Sbjct: 950 CELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYF 988



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 159/339 (46%), Gaps = 9/339 (2%)

Query: 31  RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           R G  +V  NL +           + K +  TY  I  GL   G + +    F KM++  
Sbjct: 139 RVGDMVVVFNLMQNQ---------IIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAG 189

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
            + N  +YN LIH    +    EA  ++  M+ +G++P++ +F+ +M    K    +   
Sbjct: 190 FHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETVK 249

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            LLE M  +G++PN + Y   +      GR++ A  +   ME  GC  +V +Y++LI+  
Sbjct: 250 SLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDAL 309

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C   +++ A+ L+ +M +   KPD V Y T+     +   + R  + + EM+  G A D 
Sbjct: 310 CTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDV 369

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             +   ++ LCK G I EA  L   +R      ++  YN LI GL +  RL  A +LF +
Sbjct: 370 ITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNN 429

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    ++    TY + I      G+ DKA + F  M+ +
Sbjct: 430 METLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIR 468



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 142/268 (52%), Gaps = 6/268 (2%)

Query: 6    LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
            L+ ++    C+PN  T+N +I  L ++     AL+LF ++ +G+        P   TY  
Sbjct: 847  LYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD------FSPTPCTYGP 900

Query: 66   IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
            ++DGL K G +++AKELF +M D    PN   YN LI+GF    D N A  LF  M+ +G
Sbjct: 901  LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960

Query: 126  VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            ++P++ S+  ++  LC+ G++D+A    E + Q G+  ++  YN ++DG   + R+  A 
Sbjct: 961  IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEAL 1020

Query: 186  ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             L+  M+S G   ++F+Y+ LI        +E A  LY E+   G++P+V  YN L  G 
Sbjct: 1021 TLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080

Query: 246  FEIHQVERAFKLFDEMQRHGVAADTWAY 273
                  + A+ ++  M   G + +T  +
Sbjct: 1081 SMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 102/404 (25%), Positives = 179/404 (44%), Gaps = 44/404 (10%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  +  K+    C P+V T+NT+I+GL        A+ LF +M         +  P+ VT
Sbjct: 633  ALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKK-------MLTPDCVT 685

Query: 63   YTTIIDGLCKEGFVDKA---KELFLK------------------MKDENINPNVVTYNSL 101
              T++ G+ K G ++ A    E F+                   +        ++  + L
Sbjct: 686  LCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRL 745

Query: 102  IHG---------------FCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGK 145
            + G                C       A+ +FI    + GV+P + S+N ++        
Sbjct: 746  VCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHN 805

Query: 146  MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             + A  L   M   G  P+ F YN L+D    +G++N   EL+  M    CK N  +++I
Sbjct: 806  DEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNI 865

Query: 206  LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            +I    K+  ++ AL L+ +++S    P    Y  L  GL +  ++E A +LF+EM  +G
Sbjct: 866  IIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYG 925

Query: 266  VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
               +   Y   I+G  K G +  A ELF+ +       D+++Y  L+  LC++GR+  A 
Sbjct: 926  CRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDAL 985

Query: 326  ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              F  L +  L  D + YN+MI  L    ++++A  L+ +M+++
Sbjct: 986  HYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSR 1029



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 110/207 (53%), Gaps = 6/207 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  LF ++  +GC PN   YN LING  +TG    A  LF+ M           +P+  
Sbjct: 913  EAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG------IRPDLK 966

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +YT+++  LC+ G VD A   F K+K   +  + + YN +I G   ++   EA  L+ EM
Sbjct: 967  SYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEM 1026

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              +G+ P++ ++N ++  L   G +++A +L E +  IG+ PN F YN L+ G+ ++G  
Sbjct: 1027 QSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNS 1086

Query: 182  NRAEELFVSMESMGCKHNVFSYSILIN 208
            + A  ++  M   GC  N  +++ L N
Sbjct: 1087 DSAYAVYKRMMVGGCSPNTGTFAQLPN 1113


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 188/353 (53%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V TY  L+   C+      A+ L +EM +        C P+ VTY  +++G+C+E
Sbjct: 182 GCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKG------CAPDIVTYNVVVNGICQE 235

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A E    +      PN V+YN ++ G C A  W +A+ L  EM  +G  PNVV+F
Sbjct: 236 GRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTF 295

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC+ G ++ A  +L+ + + G  PN+  YN ++  FC   +++RA      M S
Sbjct: 296 NMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVS 355

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  ++ SY+ L+   C+  E++ A+ L  ++  KG  P ++ YNT+  GL +  + E 
Sbjct: 356 SGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEE 415

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L +EM   G+  D   Y T   GLC+ G I EA++ F  ++ +    +   YN ++ 
Sbjct: 416 ALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILL 475

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK      A +LF  +     + +  TY I+I  L  +G + +AR++  ++
Sbjct: 476 GLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAEL 528



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 180/353 (50%), Gaps = 9/353 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           CEP+V +YN ++ G C TG    A  L   M           +P+T TY T+I GLC  G
Sbjct: 116 CEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---------EPDTYTYNTLIRGLCGRG 166

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
             D A  +   M      P+VVTY  L+   C  + + +A  L  EM D+G  P++V++N
Sbjct: 167 RTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYN 226

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           V++N +C+ G++D+A   L+ +   G  PN   YN ++ G C   R   AE+L   M   
Sbjct: 227 VVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRK 286

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   NV ++++LI+  C+   +E A+ +  ++   G  P+ + YN +     +  +++RA
Sbjct: 287 GRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRA 346

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
               + M   G   D  +Y T +  LC+ G +  AVEL   L+       + +YN +IDG
Sbjct: 347 MAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDG 406

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L K+G+ + A EL   +    L  D++TY+ +   LC +G++++A   F  ++
Sbjct: 407 LTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQ 459



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 182/341 (53%), Gaps = 7/341 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  GC P++ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV
Sbjct: 205 QAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPS----YG--CEPNTV 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++ GLC     + A++L  +M  +   PNVVT+N LI   C       A  +  ++
Sbjct: 259 SYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQI 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N I++  CK  KMD A   +ELM+  G  P+   YNTL+   C  G V
Sbjct: 319 PKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEV 378

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + E AL L +EM++KG++PD++ Y+T+
Sbjct: 379 DAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTI 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E A K F ++Q  G+  +T  Y   + GLCK      A++LF  +     
Sbjct: 439 SSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGC 498

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVV 341
             +   Y  LI+GL   G +K A E+   L  RGV+   +V
Sbjct: 499 MPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTLV 539



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 172/357 (48%), Gaps = 15/357 (4%)

Query: 14  GCEPNVF-TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G EP+       LI  LC +G T  A  +              C+P+ ++Y  ++ G C 
Sbjct: 84  GLEPSAAGPCAALIKKLCASGRTAEARRVLAS-----------CEPDVMSYNAMVAGYCV 132

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D A+ L   M  E   P+  TYN+LI G C     + A  +  +M+ +G  P+VV+
Sbjct: 133 TGQLDNARRLVAAMPME---PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVT 189

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           + +++   CK     +A +LL+ M   G  P+   YN +++G C  GRV+ A E   S+ 
Sbjct: 190 YTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLP 249

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S GC+ N  SY+I++ G C  +  E A  L +EM  KG  P+VV +N L   L     VE
Sbjct: 250 SYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVE 309

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++ D++ ++G   ++ +Y   +   CK   +  A+     +       DI +YN L+
Sbjct: 310 PAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLL 369

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             LC+ G +  A EL   L        +++YN +I  L   GK ++A +L  +M  K
Sbjct: 370 TALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTK 426



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 121/251 (48%), Gaps = 16/251 (6%)

Query: 125 GVQPNVV-----SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF-VYNTLMDGFCLT 178
            V PN V     + N  +  L + G ++EA RL+E M   G+ P+A      L+   C +
Sbjct: 46  AVAPNAVPHRSAASNDRLRVLVRRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCAS 103

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GR   A  +  S     C+ +V SY+ ++ GYC   +++ A  L + M    ++PD   Y
Sbjct: 104 GRTAEARRVLAS-----CEPDVMSYNAMVAGYCVTGQLDNARRLVAAM---PMEPDTYTY 155

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  GL    + + A  + D+M R G   D   Y   ++  CK     +AV+L   +R 
Sbjct: 156 NTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRD 215

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                DI  YN +++G+C+ GR+  A E  +SLP      + V+YNI++  LC   + + 
Sbjct: 216 KGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWED 275

Query: 359 ARDLFLDMEAK 369
           A  L  +M  K
Sbjct: 276 AEKLMAEMSRK 286


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 26/373 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V T+N+L+ GLC       A  LFE MA         C+PN ++Y+T++DGLCK 
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKA 192

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A  L+ +M +++  P++V Y S + G C AN   EA     +M+ +G + + V+F
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252

Query: 134 -----------------NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
                            N ++  LC++G +DEA +  E MI     P+A ++NTL+   C
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312

Query: 177 LTGRVNRAEELFVSMESMG---CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            + R+     LF  M+SM    C  N+ +Y+I+++  CK K+++ A  L +EM + G+ P
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV Y+ L  GL ++ +++RA  L +EM + GV  D++   + ++ L K G +  A+   
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
            T++      D+  YN L+DGLCK+GR+  A      +       DV +Y I+I ALC  
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492

Query: 354 GKMDKARDLFLDM 366
           G+   A  +F +M
Sbjct: 493 GQAAGAHAIFQEM 505



 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 191/377 (50%), Gaps = 27/377 (7%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R  G + +VFTYN  ++ L +     +A   F++M            P+  TY+ ++ GL
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGY------PPDDFTYSIVLRGL 83

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-QGVQPN 129
           CK G +DKAKEL  ++++  +  NV+TY+ +I G C A+  ++A  +F  M    G  P+
Sbjct: 84  CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPD 143

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+FN ++  LC   +M EA  L E M + G  PN   Y+TL+DG C  GR++ A  L+ 
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF-----IG 244
            M    C  ++ +Y+  + G CK   +  A     +M++KG K D V ++T+       G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263

Query: 245 LFEIHQ------------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
             E  Q            ++ A K F+EM           + T I  +CK+  + + V L
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323

Query: 293 FRTLRILKY---ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           F+ ++ +K      ++  YN ++D LCK+ +L  A EL   +    L  DVVTY+ ++  
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383

Query: 350 LCADGKMDKARDLFLDM 366
           LC  GK+D+A DL  +M
Sbjct: 384 LCKLGKLDRACDLLEEM 400



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 182/364 (50%), Gaps = 41/364 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F ++      P+   +NTLI+ +C++      + LF+ M +   EF   C PN  
Sbjct: 284 EACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK-EF--YCPPNLE 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D LCK   +D+A+EL  +M +  ++P+VVTY++L+ G C     + A  L  EM
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+  +   I+N L K GK+D A   LE M   G  P+   YNTL+DG C  GR+
Sbjct: 401 SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRI 460

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M +  C  +VFSY+I+I   C++ +  GA +++ EM+ +G+ PD V+Y++L
Sbjct: 461 DEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSL 520

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                                              +DGL +NG    A+EL +T      
Sbjct: 521 -----------------------------------LDGLARNGLEDLALELLKTSLC--- 542

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   +  ++DGLCK+G+ + A E+   +      AD  TY  ++  L   GK+DKAR 
Sbjct: 543 KPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQ 602

Query: 362 LFLD 365
           L  D
Sbjct: 603 LVDD 606



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 186/384 (48%), Gaps = 27/384 (7%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F +++  G  P+ FTY+ ++ GLC+ G    A  L  ++     E GV  K N +TY+ +
Sbjct: 61  FQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLR----ESGV--KLNVITYSVV 114

Query: 67  IDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           IDG CK   VD A E+F  M       P+VVT+NSL+ G C     +EA  LF  M   G
Sbjct: 115 IDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG 174

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +PNV+S++ +++ LCK G++DEA RL E M++    P+   Y + + G C   RV  A 
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCK--------NKEIEG---------ALSLYSEMLS 228
           +    M + G K +  ++S +I   CK        N+ IE          A   + EM+S
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFIDGLCKNGY 285
           +   P   ++NTL   + +  ++     LF  M+         +   Y   +D LCK   
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA EL   +       D+  Y+ L+DGLCK G+L  A +L   + +  +  D  T   
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           +++AL   GK+D A      M+A+
Sbjct: 415 ILNALSKAGKVDYALSHLETMKAR 438



 Score =  139 bits (351), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 18/300 (6%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           + +    +V TYN  +     AN    A   F +M  +G  P+  ++++++  LCK G++
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES-MGCKHNVFSYSI 205
           D+A  LL  + + GV+ N   Y+ ++DG C   RV+ A E+F +M S  GC  +V +++ 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNS 149

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+ G C  + +  A  L+  M   G +P+V+ Y+TL  GL +  +++ A +L++EM    
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY----------------- 308
              D  AY +F+ GLCK   + EA +  R +     + D  A+                 
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N +I+ LC+SG L  A + F  +           +N +IHA+C   ++     LF  M++
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 2/239 (0%)

Query: 133 FNVIMNELCKNGKMDEASRLLE-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + V+   L   GK+    RL + L  Q G + + F YN  +D          A E F  M
Sbjct: 5   YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           +  G   + F+YSI++ G CK  E++ A  L  ++   G+K +V+ Y+ +  G  +  +V
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124

Query: 252 ERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           + A ++F  M   G    D   + + + GLC    + EA  LF  +     E ++ +Y+ 
Sbjct: 125 DDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+DGLCK+GRL  A  L+  +     + D+V Y   +  LC   ++ +A D    M  K
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 202/373 (54%), Gaps = 26/373 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V T+N+L+ GLC       A  LFE MA         C+PN ++Y+T++DGLCK 
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG------CEPNVISYSTLLDGLCKA 192

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A  L+ +M +++  P++V Y S + G C AN   EA     +M+ +G + + V+F
Sbjct: 193 GRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAF 252

Query: 134 -----------------NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
                            N ++  LC++G +DEA +  E MI     P+A ++NTL+   C
Sbjct: 253 STVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVC 312

Query: 177 LTGRVNRAEELFVSMESMG---CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            + R+     LF  M+SM    C  N+ +Y+I+++  CK K+++ A  L +EM + G+ P
Sbjct: 313 KSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSP 372

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV Y+ L  GL ++ +++RA  L +EM + GV  D++   + ++ L K G +  A+   
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
            T++      D+  YN L+DGLCK+GR+  A      +       DV +Y I+I ALC  
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492

Query: 354 GKMDKARDLFLDM 366
           G+   A  +F +M
Sbjct: 493 GQAAGAHAIFQEM 505



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/377 (31%), Positives = 191/377 (50%), Gaps = 27/377 (7%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R  G + +VFTYN  ++ L +     +A   F++M            P+  TY+ ++ GL
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGY------PPDDFTYSIVLRGL 83

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM-MDQGVQPN 129
           CK G +DKAKEL  ++++  +  NV+TY+ +I G C A+  ++A  +F  M    G  P+
Sbjct: 84  CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPD 143

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+FN ++  LC   +M EA  L E M + G  PN   Y+TL+DG C  GR++ A  L+ 
Sbjct: 144 VVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWE 203

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF-----IG 244
            M    C  ++ +Y+  + G CK   +  A     +M++KG K D V ++T+       G
Sbjct: 204 EMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKG 263

Query: 245 LFEIHQ------------VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
             E  Q            ++ A K F+EM           + T I  +CK+  + + V L
Sbjct: 264 HAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLL 323

Query: 293 FRTLRILKY---ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           F+ ++ +K      ++  YN ++D LCK+ +L  A EL   +    L  DVVTY+ ++  
Sbjct: 324 FQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDG 383

Query: 350 LCADGKMDKARDLFLDM 366
           LC  GK+D+A DL  +M
Sbjct: 384 LCKLGKLDRACDLLEEM 400



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 182/364 (50%), Gaps = 41/364 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F ++      P+   +NTLI+ +C++      + LF+ M +   EF   C PN  
Sbjct: 284 EACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMK-EF--YCPPNLE 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D LCK   +D+A+EL  +M +  ++P+VVTY++L+ G C     + A  L  EM
Sbjct: 341 TYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEM 400

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+  +   I+N L K GK+D A   LE M   G  P+   YNTL+DG C  GR+
Sbjct: 401 SKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRI 460

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M +  C  +VFSY+I+I   C++ +  GA +++ EM+ +G+ PD V+Y++L
Sbjct: 461 DEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSL 520

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                                              +DGL +NG    A+EL +T      
Sbjct: 521 -----------------------------------LDGLARNGLEDLALELLKTSLC--- 542

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   +  ++DGLCK+G+ + A E+   +      AD  TY  ++  L   GK+DKAR 
Sbjct: 543 KPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQ 602

Query: 362 LFLD 365
           L  D
Sbjct: 603 LVDD 606



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/384 (30%), Positives = 186/384 (48%), Gaps = 27/384 (7%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F +++  G  P+ FTY+ ++ GLC+ G    A  L  ++     E GV  K N +TY+ +
Sbjct: 61  FQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLR----ESGV--KLNVITYSVV 114

Query: 67  IDGLCKEGFVDKAKELFLKMK-DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           IDG CK   VD A E+F  M       P+VVT+NSL+ G C     +EA  LF  M   G
Sbjct: 115 IDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAG 174

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +PNV+S++ +++ LCK G++DEA RL E M++    P+   Y + + G C   RV  A 
Sbjct: 175 CEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEAC 234

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCK--------NKEIEG---------ALSLYSEMLS 228
           +    M + G K +  ++S +I   CK        N+ IE          A   + EM+S
Sbjct: 235 DCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMIS 294

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG---VAADTWAYRTFIDGLCKNGY 285
           +   P   ++NTL   + +  ++     LF  M+         +   Y   +D LCK   
Sbjct: 295 RNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ 354

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA EL   +       D+  Y+ L+DGLCK G+L  A +L   + +  +  D  T   
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           +++AL   GK+D A      M+A+
Sbjct: 415 ILNALSKAGKVDYALSHLETMKAR 438



 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 147/300 (49%), Gaps = 18/300 (6%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           + +    +V TYN  +     AN    A   F +M  +G  P+  ++++++  LCK G++
Sbjct: 30  RQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGEL 89

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES-MGCKHNVFSYSI 205
           D+A  LL  + + GV+ N   Y+ ++DG C   RV+ A E+F +M +  GC  +V +++ 
Sbjct: 90  DKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNS 149

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+ G C  + +  A  L+  M   G +P+V+ Y+TL  GL +  +++ A +L++EM    
Sbjct: 150 LLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKS 209

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY----------------- 308
              D  AY +F+ GLCK   + EA +  R +     + D  A+                 
Sbjct: 210 CVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQ 269

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N +I+ LC+SG L  A + F  +           +N +IHA+C   ++     LF  M++
Sbjct: 270 NQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKS 329



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 113/239 (47%), Gaps = 2/239 (0%)

Query: 133 FNVIMNELCKNGKMDEASRLLE-LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + V+   L   GK+    RL + L  Q G + + F YN  +D          A E F  M
Sbjct: 5   YTVVGEVLRHLGKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           +  G   + F+YSI++ G CK  E++ A  L  ++   G+K +V+ Y+ +  G  +  +V
Sbjct: 65  QRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRV 124

Query: 252 ERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           + A ++F  M   G    D   + + + GLC    + EA  LF  +     E ++ +Y+ 
Sbjct: 125 DDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYST 184

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+DGLCK+GRL  A  L+  +     + D+V Y   +  LC   ++ +A D    M  K
Sbjct: 185 LLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTK 243


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/362 (35%), Positives = 194/362 (53%), Gaps = 6/362 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G  PN++TY   I  L R G    A  + + M +        C P+ VTYT 
Sbjct: 249 LLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG------CGPDVVTYTV 302

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +ID LC  G +DKAKEL+ KM+  +  P++VTY +L+  F    D    K  + EM   G
Sbjct: 303 LIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADG 362

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+VV++ +++  LCK+GK+D+A  +L++M   G+ PN   YNTL+ G     R++ A 
Sbjct: 363 YAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL 422

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ELF +MES+G     +SY + I+ Y K  + E AL  + +M  +GI P +   N     L
Sbjct: 423 ELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSL 482

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            E+ ++  A  +F+++   G++ D+  Y   +    K G I +A +L   +     E DI
Sbjct: 483 AEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDI 542

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
              N LID L K+GR+  AW++F  L    L   VVTYNI+I  L  +GK+ KA DLF  
Sbjct: 543 IVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGS 602

Query: 366 ME 367
           M+
Sbjct: 603 MK 604



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/297 (32%), Positives = 161/297 (54%), Gaps = 6/297 (2%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  LF++++  GC PN+FTYN L++   ++        L+ EM          CKPN +T
Sbjct: 807  ALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRG------CKPNIIT 860

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +  II  L K   ++KA +L+ ++   + +P   TY  LI G   A    EA  +F EM 
Sbjct: 861  HNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMP 920

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            D   +PN   +N+++N   K G ++ A  L + MI+ G+RP+   Y  L++   +TGRV+
Sbjct: 921  DYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVD 980

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A   F  ++  G   +  SY+++ING  K++ +E ALSL+SEM ++GI P++  YN L 
Sbjct: 981  DAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALI 1040

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +       V++A K+F+E+Q  G+  + + Y   I G  K+G    A  +F+ + I+
Sbjct: 1041 LHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIV 1097



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     K+R  G   N ++YN LI  L + G    AL +++ M +         KP+  
Sbjct: 175 QAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG------LKPSMK 228

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ ++  L +        +L  +M+   + PN+ TY   I     A   ++A  +   M
Sbjct: 229 TYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTM 288

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VV++ V+++ LC  GK+D+A  L   M     +P+   Y TLM  F   G +
Sbjct: 289 EDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDL 348

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              +  +  ME+ G   +V +Y+IL+   CK+ +++ A  +   M  +GI P++  YNTL
Sbjct: 349 ETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A +LF+ M+  GVA   ++Y  FID   K G   +A++ F  ++    
Sbjct: 409 ISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGI 468

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              I A N  +  L + GR++ A ++F  +    L  D VTYN+M+      G++DKA  
Sbjct: 469 MPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATK 528

Query: 362 LFLDM 366
           L  +M
Sbjct: 529 LLTEM 533



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 199/404 (49%), Gaps = 44/404 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF  ++  GC PN  T+N L++ LC+     +AL +F  M   N      C P+ 
Sbjct: 594 LKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMN------CSPDV 647

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY TII GL KEG    A   + +MK + ++P+ VT  +L+ G        +A  + +E
Sbjct: 648 LTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRVEDAIKIVME 706

Query: 121 MMDQ-GVQPN-------------------VVSF-------------NVIM---NELCKNG 144
            + Q G+Q +                    +SF             N+I+     LCK  
Sbjct: 707 FVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQK 766

Query: 145 KMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           K  +A +L +   + +G  P    YN LMDG         A +LFV M++ GC  N+F+Y
Sbjct: 767 KALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTY 826

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           ++L++ + K+K I+    LY+EML +G KP+++ +N +   L + + + +A  L+ E+  
Sbjct: 827 NLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIIS 886

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
              +     Y   I GL K G   EA+++F  +   + + +   YN LI+G  K+G + I
Sbjct: 887 GDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNI 946

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           A +LF+ + +  +  D+ +Y I++  L   G++D A   F +++
Sbjct: 947 ACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELK 990



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 173/353 (49%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V TY  LI+ LC  G    A  L+ +M   +       KP+ VTY T++      
Sbjct: 292 GCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSH------KPDLVTYITLMSKFGNY 345

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++  K  + +M+ +   P+VVTY  L+   C +   ++A  +   M  +G+ PN+ ++
Sbjct: 346 GDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTY 405

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ L    ++DEA  L   M  +GV P A+ Y   +D +   G   +A + F  M+ 
Sbjct: 406 NTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKK 465

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ + +  +    +   I  A  +++++ + G+ PD V YN +     +  Q+++
Sbjct: 466 RGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDK 525

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KL  EM   G   D     + ID L K G + EA ++F  L+ LK    +  YN LI 
Sbjct: 526 ATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILIT 585

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GL K G+L  A +LF S+       + VT+N ++  LC +  +D A  +F  M
Sbjct: 586 GLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM 638



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 168/342 (49%), Gaps = 5/342 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
            LI  LC+    + A  LF++     G       P   +Y  ++DGL      + A +LF+
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLG-----THPTPESYNCLMDGLLGCNITEAALKLFV 812

Query: 85   KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
            +MK+    PN+ TYN L+     +   +E   L+ EM+ +G +PN+++ N+I++ L K+ 
Sbjct: 813  EMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSN 872

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             +++A  L   +I     P    Y  L+ G    GR   A ++F  M    CK N   Y+
Sbjct: 873  SINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYN 932

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILING+ K   +  A  L+  M+ +GI+PD+  Y  L   LF   +V+ A   F+E++  
Sbjct: 933  ILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLT 992

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            G+  DT +Y   I+GL K+  + EA+ LF  ++      ++  YN LI     +G +  A
Sbjct: 993  GLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQA 1052

Query: 325  WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             ++F  L    L  +V TYN +I      G  D+A  +F  M
Sbjct: 1053 GKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 174/352 (49%), Gaps = 7/352 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TY  L+  LC++G    A ++ + M       G+V  PN  TY T+I GL   
Sbjct: 362 GYAPDVVTYTILVEALCKSGKVDQAFDMLDVMR----VRGIV--PNLHTYNTLISGLLNL 415

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A ELF  M+   + P   +Y   I  +    D  +A   F +M  +G+ P++ + 
Sbjct: 416 RRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAAC 475

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  +  L + G++ EA  +   +   G+ P++  YN +M  +   G++++A +L   M S
Sbjct: 476 NASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLS 535

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ ++   + LI+   K   ++ A  ++  +    + P VV YN L  GL +  ++ +
Sbjct: 536 EGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLK 595

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF  M+  G   +T  +   +D LCKN  +  A+++F  + I+    D+  YN +I 
Sbjct: 596 ALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIY 655

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           GL K GR   A+  +  + +  L  D VT   ++  +  DG+++ A  + ++
Sbjct: 656 GLIKEGRAGYAFWFYHQMKK-FLSPDHVTLYTLLPGVVKDGRVEDAIKIVME 706



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 186/402 (46%), Gaps = 44/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +L+     P V TYN LI GL + G  + AL+LF  M          C PNTV
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESG------CPPNTV 613

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D LCK   VD A ++F +M   N +P+V+TYN++I+G         A   F   
Sbjct: 614 TFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYA-FWFYHQ 672

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRL-LELMIQIGVRPNAFVYNTLMDG------ 174
           M + + P+ V+   ++  + K+G++++A ++ +E + Q G++ +  V+  LM+       
Sbjct: 673 MKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAE 732

Query: 175 -----------------------------FCLTGRVNRAEELFVSM-ESMGCKHNVFSYS 204
                                         C   +   A++LF    +S+G      SY+
Sbjct: 733 IEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYN 792

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            L++G       E AL L+ EM + G  P++  YN L     +  +++  F+L++EM   
Sbjct: 793 CLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCR 852

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   +   +   I  L K+  I +A++L+  +    +      Y  LI GL K+GR + A
Sbjct: 853 GCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEA 912

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            ++F  +P      +   YNI+I+     G ++ A DLF  M
Sbjct: 913 MKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRM 954



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 152/316 (48%), Gaps = 10/316 (3%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH-----GFCYANDWNE 113
           N  TY TI   L  +G + +A     KM+      N  +YN LI+     GFC      E
Sbjct: 156 NPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFC-----KE 210

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A  ++  M+ +G++P++ +++ +M  L +         LLE M  +G+RPN + Y   + 
Sbjct: 211 ALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIR 270

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
                GR++ A  +  +ME  GC  +V +Y++LI+  C   +++ A  LY++M +   KP
Sbjct: 271 VLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKP 330

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           D+V Y TL         +E   + + EM+  G A D   Y   ++ LCK+G + +A ++ 
Sbjct: 331 DLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDML 390

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +R+     ++  YN LI GL    RL  A ELF ++    +     +Y + I      
Sbjct: 391 DVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKL 450

Query: 354 GKMDKARDLFLDMEAK 369
           G  +KA D F  M+ +
Sbjct: 451 GDPEKALDTFEKMKKR 466



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 149/303 (49%), Gaps = 1/303 (0%)

Query: 66   IIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I  LCK+     AK+LF K  K    +P   +YN L+ G    N    A  LF+EM + 
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 125  GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            G  PN+ ++N++++   K+ ++DE   L   M+  G +PN   +N ++     +  +N+A
Sbjct: 818  GCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKA 877

Query: 185  EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +L+  + S        +Y  LI G  K    E A+ ++ EM     KP+  IYN L  G
Sbjct: 878  LDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILING 937

Query: 245  LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
              +   V  A  LF  M + G+  D  +Y   ++ L   G + +AV  F  L++   + D
Sbjct: 938  FGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPD 997

Query: 305  IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              +YN +I+GL KS RL+ A  LF  +    +  ++ TYN +I      G +D+A  +F 
Sbjct: 998  TVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFE 1057

Query: 365  DME 367
            +++
Sbjct: 1058 ELQ 1060



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 64/207 (30%), Positives = 112/207 (54%), Gaps = 6/207 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  +F ++  + C+PN   YN LING  + G+  +A +LF+ M           +P+  
Sbjct: 911  EAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEG------IRPDLK 964

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +YT +++ L   G VD A   F ++K   ++P+ V+YN +I+G   +    EA  LF EM
Sbjct: 965  SYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEM 1024

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P + ++N ++      G +D+A ++ E +  +G+ PN F YN L+ G   +G  
Sbjct: 1025 KNRGISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNK 1084

Query: 182  NRAEELFVSMESMGCKHNVFSYSILIN 208
            +RA  +F  M  +GC  N  +++ L N
Sbjct: 1085 DRAFSVFKKMMIVGCSPNAGTFAQLPN 1111



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 114/253 (45%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F  M  Q +  N  ++  I   L   G + +A   L  M Q G   NA+ YN L+    
Sbjct: 144 VFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLL 203

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G    A +++  M S G K ++ +YS L+    + ++    + L  EM + G++P++ 
Sbjct: 204 QPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIY 263

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y      L    +++ A+ +   M+  G   D   Y   ID LC  G + +A EL+  +
Sbjct: 264 TYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKM 323

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R   ++ D+  Y  L+      G L+     +  +       DVVTY I++ ALC  GK+
Sbjct: 324 RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKV 383

Query: 357 DKARDLFLDMEAK 369
           D+A D+   M  +
Sbjct: 384 DQAFDMLDVMRVR 396



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 52/269 (19%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVV----SFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           +D N A   F +M+ Q   PN+V    + N ++  L  +G++++ + + +LM +  +  N
Sbjct: 100 SDPNSALSYF-KMVSQ--LPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRN 156

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI-----NGYCKNKEIEGA 219
              Y T+     + G + +A      M   G   N +SY+ LI      G+CK      A
Sbjct: 157 PNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKE-----A 211

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L +Y  M+S+G+KP +  Y+ L + L           L +EM+  G+  + + Y      
Sbjct: 212 LKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYT----- 266

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           +C              +R+L                 ++GR+  A+ + +++       D
Sbjct: 267 IC--------------IRVLG----------------RAGRIDDAYGILKTMEDEGCGPD 296

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEA 368
           VVTY ++I ALCA GK+DKA++L+  M A
Sbjct: 297 VVTYTVLIDALCAAGKLDKAKELYTKMRA 325



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 73/138 (52%), Gaps = 6/138 (4%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A   F +L++ G +P+  +YN +INGL ++     AL+LF EM N          P   
Sbjct: 981  DAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRG------ISPELY 1034

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY  +I      G VD+A ++F +++   + PNV TYN+LI G   + + + A  +F +M
Sbjct: 1035 TYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKM 1094

Query: 122  MDQGVQPNVVSFNVIMNE 139
            M  G  PN  +F  + N+
Sbjct: 1095 MIVGCSPNAGTFAQLPNK 1112


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 204/370 (55%), Gaps = 8/370 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPN 59
           +EA  LF ++   G  P++ T+N LI+ LC+ G+   +  LF + M  G      VC PN
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG------VC-PN 250

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T+   I GLC++G +D+A  L   +  E + P+V++YN+LI GFC  +   EA+C   
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M++ GV+PN  ++N I+N  CK G M  A ++L   +  G  P+ F Y++L++G C  G
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +NRA  +F      G KH++  Y+ L+ G  K   +  AL L  +M+  G  PD+  YN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GL ++  +  A  + ++    G   D + + T IDG CK   + +A+E+  T+   
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+  YN L++GLCK+ +L    + F+++       +++TYNI+I + C D K+ +A
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 360 RDLFLDMEAK 369
            +LF +M+ +
Sbjct: 551 MELFKEMKTR 560



 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 204/403 (50%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++M+++  G  P+V+T+   +   C TG    AL L   M  G G     C+ N V
Sbjct: 129 QAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP-GQG-----CEFNAV 182

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I G  KE    +A  LF +M  + I P+++T+N LIH  C   +  E++ LF ++
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +GV PN+ +FN+ +  LC+ G +DEA+RLLE ++  G+ P+   YNTL+ GFC   ++
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK----------------------------- 212
             AE     M + G + N F+Y+ +ING+CK                             
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362

Query: 213 ------NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                 + ++  A++++ E + KG K  +++YNTL  GL +   V +A +L  +M  HG 
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + D W Y   ++GLCK G + +A  +           DI  +N LIDG CK   +  A E
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  ++    +  DV+TYN +++ LC   K+D   D F  M  K
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525



 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 192/366 (52%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L   +   G  P+V +YNTLI G C+    + A     +M N   E      PN  
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE------PNEF 322

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TII+G CK G +  A ++      +   P+  TY+SLI+G C   D N A  +F E 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++G + +++ +N ++  L K G + +A +L++ M++ G  P+ + YN +++G C  G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +     + GC  ++F+++ LI+GYCK + ++ A+ +   MLS GI PDV+ YNTL
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++     F  M   G   +   Y   I+  CK+  + EA+ELF+ ++    
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIMIHALCADGKMDKAR 360
             DI     LI GLC +G L  A+ELF ++ +    +     +NIMI+A C    +  A 
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAE 622

Query: 361 DLFLDM 366
            LF  M
Sbjct: 623 KLFHKM 628



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 197/366 (53%), Gaps = 7/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     K+   G EPN FTYNT+ING C+ G    A  +  +        G +  P+ 
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK----GFI--PDE 356

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY+++I+GLC +G +++A  +F +  ++    +++ YN+L+ G        +A  L  +
Sbjct: 357 FTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKD 416

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM+ G  P++ ++N+++N LCK G + +A+ +L   I  G  P+ F +NTL+DG+C    
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A E+  +M S G   +V +Y+ L+NG CK ++++  +  +  ML KG  P+++ YN 
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RIL 299
           L     +  +V  A +LF EM+  G+  D     T I GLC NG + +A ELF T+ +  
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K+      +N +I+  C+   + +A +LF  +       D  TY +MI + C  G +D A
Sbjct: 597 KFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 360 RDLFLD 365
               L+
Sbjct: 657 HTFLLE 662



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 189/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++  + CEP+V +YN ++N L   G+   A  ++  M     + G+   P+  
Sbjct: 94  EAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK----DIGIY--PDVY 147

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T  +   C  G    A  L   M  +    N V+Y ++I GF   N   EA  LF EM
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ P++++FN +++ LCK G + E+ +L   +++ GV PN F +N  + G C  G +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L  S+ S G   +V SY+ LI G+CK+ ++  A     +M++ G++P+   YNT+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A K+  +    G   D + Y + I+GLC +G +  A+ +F       +
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  I  YN L+ GL K G +  A +L + +       D+ TYN++++ LC  G +  A  
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 362 LFLDMEAK 369
           +  D  AK
Sbjct: 448 ILNDAIAK 455



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 148/307 (48%), Gaps = 46/307 (14%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCKP 58
           ++A  L   +   GC P+++TYN ++NGLC+ G            ANG  N      C P
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL--------SDANGILNDAIAKGCIP 459

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  T+ T+IDG CK+  +DKA E+   M    I P+V+TYN+L++G C A   +     F
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M+++G  PN++++N+++   CK+ K+ EA  L + M   G+ P+     TL+ G C  
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSN 579

Query: 179 GRVNRAEELFVSMES---------------------------------MG---CKHNVFS 202
           G +++A ELFV++E                                  MG   C  + ++
Sbjct: 580 GELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYT 639

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y ++I+ YCK   I+ A +   E +SKG+ P       +   L   H++  A  + + M 
Sbjct: 640 YRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMV 699

Query: 263 RHGVAAD 269
           ++G+  +
Sbjct: 700 QNGIVPE 706



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 171/370 (46%), Gaps = 45/370 (12%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV- 96
           AL +F ++   +G      K    TY  +I+ L   G  +  +++  +M+ +N++  ++ 
Sbjct: 23  ALKMFNQVKTEDG-----FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLE 76

Query: 97  -TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
             Y  ++  +       EA  +F  M     +P+V S+N IMN L + G   +A ++   
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK-NK 214
           M  IG+ P+ + +   M  FC+TGR   A  L  +M   GC+ N  SY  +I+G+ K N 
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV-------- 266
           +IE A  L+ EML +GI PD++ +N L   L +   V+ + KLF ++ + GV        
Sbjct: 197 QIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 267 ---------------------------AADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                                        D  +Y T I G CK+  +VEA      +   
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             E +   YN +I+G CK+G ++ A ++ R       I D  TY+ +I+ LC DG M++A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 360 RDLFLDMEAK 369
             +F +   K
Sbjct: 376 MAVFYEAMEK 385



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 150/330 (45%), Gaps = 50/330 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++FT+NTLI+G C+  +   A+ + + M +     G+   P+ +TY T+++GLCK 
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS----HGIT--PDVITYNTLLNGLCKA 509

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D   + F  M ++   PN++TYN LI  FC     +EA  LF EM  +G+ P++V+ 
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL 569

Query: 134 NVIMNELCKNGKMDEASRLL---------------------------------ELMIQIG 160
             ++  LC NG++D+A  L                                  +L  ++G
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMG 629

Query: 161 ---VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                P+ + Y  ++D +C TG ++ A    +   S G   +  +   ++N  C    + 
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE-RAFKLFDEMQRHGVAADTWAYRTF 276
            A+ + + M+  GI P+ V        +FE  + E  A K+  E          ++Y   
Sbjct: 690 EAVVIINLMVQNGIVPEEV------NSIFEADKKEVAAPKIVVEYLLKKSHITYYSYELL 743

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIR 306
            DG+ +N  +VEA  L   +   K +L + 
Sbjct: 744 YDGI-RNRKVVEARPLLYKVAYQKAKLQLE 772



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/291 (23%), Positives = 121/291 (41%), Gaps = 37/291 (12%)

Query: 107 YANDWNEAKCLFIEM-MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPN 164
           Y ND   A  +F ++  + G +  + ++  ++ +L  +GK +    +L E+   +  +  
Sbjct: 16  YQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKML 75

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             VY  +M  +   G+V  A  +F  M+   C+ +V SY+ ++N   +      A  +Y 
Sbjct: 76  EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135

Query: 225 EMLSKGIKPDV-----------------------------------VIYNTLFIGLFEIH 249
            M   GI PDV                                   V Y  +  G ++ +
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKEN 195

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
               A+ LFDEM + G+  D   +   I  LCK G + E+ +LF  +       ++  +N
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             I GLC+ G +  A  L  S+    L  DV++YN +I   C   K+ +A 
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 193/353 (54%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYNT +NGLC+ GH   AL + + M     +      P+  TY  +++ LCK 
Sbjct: 285 GFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKN 338

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++AK +  +M +    P++ T+N+LI   C  N   EA  L  ++  +G+ P+V +F
Sbjct: 339 GQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTF 398

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK G    A RL E M   G  P+   YNTL+D  C  G++ +A +L   MES
Sbjct: 399 NILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMES 458

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI  + + +NTL  GL +  +++ 
Sbjct: 459 AGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDD 518

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L  +M   G+  +   Y + +   CK G I +A ++ +T+    +E+D+  Y  LI+
Sbjct: 519 ANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLIN 578

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+GR ++A +L R +    + A    YN +I +L        A +LF +M
Sbjct: 579 GLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREM 631



 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/357 (33%), Positives = 189/357 (52%), Gaps = 7/357 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+VFTYN ++N LC+ G    A  +  +M     E G  C P+  T+ T+I  LC  
Sbjct: 320 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMV----ERG--CLPDITTFNTLIVALCSG 373

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A +L  ++  + ++P+V T+N LI+  C   D   A  LF EM   G  P+ V++
Sbjct: 374 NRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTY 433

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  AEE+F  M+ 
Sbjct: 434 NTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDL 493

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K I+ A  L S+M+S+G++P+ + YN++     +   +++
Sbjct: 494 QGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKK 553

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +   M  +G   D   Y T I+GLCK G    A++L R +RI       +AYN +I 
Sbjct: 554 AADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQ 613

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
            L +    + A  LFR +       D  TY I+   LC   G + +A D  L+M  K
Sbjct: 614 SLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDK 670



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 189/384 (49%), Gaps = 29/384 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN---------------GNGEFGVV--- 55
           G +P+V T+NTL+  LCR      A+ + EEM++               G  E G +   
Sbjct: 180 GIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAA 239

Query: 56  -----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                      C P  VT   +I+G CK G V+ A     +       P+ +TYN+ ++G
Sbjct: 240 LRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNG 299

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C       A  +   M+ +G  P+V ++N+++N LCKNG+++EA  +L  M++ G  P+
Sbjct: 300 LCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPD 359

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              +NTL+   C   R+  A +L   +   G   +V++++ILIN  CK  + + AL L+ 
Sbjct: 360 ITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFE 419

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           EM S G  PD V YNTL   L  + ++ +A  L  EM+  G    T  Y T IDGLCK  
Sbjct: 420 EMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKM 479

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            I EA E+F  + +     +   +N LIDGLCK  R+  A +L   +    L  + +TYN
Sbjct: 480 RIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYN 539

Query: 345 IMIHALCADGKMDKARDLFLDMEA 368
            ++   C  G + KA D+   M A
Sbjct: 540 SILTHYCKQGDIKKAADILQTMTA 563



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 171/319 (53%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ + G  P+V+T+N LIN LC+ G   +AL LFEEM +        C P+ V
Sbjct: 378 EALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSG------CTPDEV 431

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID LC  G + KA +L  +M+      + VTYN++I G C      EA+ +F +M
Sbjct: 432 TYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQM 491

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N ++FN +++ LCK+ ++D+A++L+  MI  G++PN   YN+++  +C  G +
Sbjct: 492 DLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDI 551

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL L   M  KG++     YN +
Sbjct: 552 KKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPV 611

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF  +    A  LF EM   G   D + Y+    GLC+  G I EA +    +    
Sbjct: 612 IQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKG 671

Query: 301 YELDIRAYNCLIDGLCKSG 319
           +  +  ++  L +GL   G
Sbjct: 672 FIPEFSSFRMLAEGLLNLG 690



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 182/356 (51%), Gaps = 6/356 (1%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           +FG + +   YN L+N L       +   ++ EM    GE G+  KP+ VT+ T++  LC
Sbjct: 143 LFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEM----GERGI--KPDVVTFNTLMKALC 196

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +   V  A  +  +M    + P+  T+ +L+ GF        A  +   M++ G  P  V
Sbjct: 197 RAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKV 256

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + NV++N  CK G++++A   ++  I  G  P+   YNT ++G C  G V  A ++   M
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+  +NTL + L   +++
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A  L  ++   G++ D + +   I+ LCK G    A+ LF  ++      D   YN L
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ID LC  G+L  A +L + +         VTYN +I  LC   ++++A ++F  M+
Sbjct: 437 IDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMD 492



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 160/317 (50%), Gaps = 2/317 (0%)

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
           FG+  + +TV Y  +++ L +   +   + ++ +M +  I P+VVT+N+L+   C A+  
Sbjct: 144 FGI--QADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQV 201

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
             A  +  EM   GV P+  +F  +M    + G +  A R+   M+++G  P     N L
Sbjct: 202 RTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVL 261

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++G+C  GRV  A        + G + +  +Y+  +NG C+N  +  AL +   M+ +G 
Sbjct: 262 INGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGH 321

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            PDV  YN +   L +  Q+E A  + ++M   G   D   + T I  LC    + EA++
Sbjct: 322 DPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALD 381

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L R + +     D+  +N LI+ LCK G  ++A  LF  +       D VTYN +I  LC
Sbjct: 382 LARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLC 441

Query: 352 ADGKMDKARDLFLDMEA 368
           + GK+ KA DL  +ME+
Sbjct: 442 SLGKLGKALDLLKEMES 458



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   G E +V TY TLINGLC+ G T VAL L   M       G+   P   
Sbjct: 553 KAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIK----GMRATPKA- 607

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  +I  L +      A  LF +M +    P+  TY  +  G C       EA    +E
Sbjct: 608 -YNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLE 666

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+D+G  P   SF ++   L   G  D   R +E++I+
Sbjct: 667 MVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIIE 704



 Score = 40.8 bits (94), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 2/97 (2%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF--RTLRILKYELDIRAYNCLIDG 314
           L  EM+R G         +F++   +    V+AV+L   +   +   + D   YN L++ 
Sbjct: 100 LVTEMRREGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNV 159

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L +  ++K+   ++  +    +  DVVT+N ++ ALC
Sbjct: 160 LVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALC 196


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 192/353 (54%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYNT +NGLC+  H   AL + + M     +      P+  TY  +++ LCK 
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKN 334

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++AK +  +M D    P++ T+N+LI   C  N   EA  L  ++  +GV P+V +F
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 394

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK G    A RL E M   G  P+   YNTL+D  C  G++ +A +L   MES
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 454

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI  + + +NTL  GL +  +++ 
Sbjct: 455 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 514

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF+L ++M   G+  +   Y + +   CK G I +A ++  T+    +E+D+  Y  LI+
Sbjct: 515 AFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 574

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+GR ++A ++ R +    +      YN ++ +L     +  A  LF +M
Sbjct: 575 GLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 194/357 (54%), Gaps = 7/357 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+VFTYN ++N LC+ G    A  +  +M +        C P+  T+ T+I  LC  
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTG 369

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A +L  ++  + ++P+V T+N LI+  C   D + A  LF EM + G  P+ V++
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  AEE+F  M+ 
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K+I+ A  L ++M+S+G++P+ + YN++     +   +++
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + + M  +G   D   Y T I+GLCK G    A+++ R +RI       +AYN ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
            L +   ++ A  LFR +       D +TY I+   LC   G + +A D  L+M  K
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 194/393 (49%), Gaps = 29/393 (7%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN---------------GN 49
           +++ ++   G +P+V T+NTL+  LCR      A+ + EEM++               G 
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGF 226

Query: 50  GEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
            E G +              C    VT   +I+G CK G V+ A     +   +   P+ 
Sbjct: 227 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 286

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +TYN+ ++G C  +    A  +   M+ +G  P+V ++N+++N LCKNG+++EA  +L  
Sbjct: 287 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 346

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G  P+   +NTL+   C   R+  A +L   +   G   +V++++ILIN  CK  +
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              AL L+ EM + G  PD V YNTL   L  + ++ +A  L  +M+  G    T  Y T
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDGLCK   I EA E+F  + +     +   +N LIDGLCK  ++  A+EL   +    
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           L  + +TYN ++   C  G + KA D+   M A
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTA 559



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 169/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ V G  P+V+T+N LIN LC+ G   +AL LFEEM N        C P+ V
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG------CTPDEV 427

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID LC  G + KA +L   M+      + +TYN++I G C      EA+ +F +M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 487

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N ++FN +++ LCK+ K+D+A  L+  MI  G++PN   YN+++  +C  G +
Sbjct: 488 DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL +   M  KG++P    YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 301 YELDIRAYNCLIDGLCKSG 319
           +  +  ++  L +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 6/356 (1%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           +FG + +   YN L+N L       +  +++ EM    G  G+  KP+ VT+ T++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +   V  A  +  +M    + P+  T+ +L+ GF        A  +   M++ G     V
Sbjct: 193 RAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + NV++N  CK G++++A   ++  I  G  P+   YNT ++G C    V  A ++   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+  +NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A  L  ++   GV+ D + +   I+ LCK G    A+ LF  ++      D   YN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ID LC  G+L  A +L + +         +TYN +I  LC   ++++A ++F  M+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 2/307 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P    Y  II  L   G +D  K L  +M+ E     +   +S +  +     +++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 118 FIEMMDQ--GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +  +    G+Q + V +N ++N L +  KM     +   M   G++P+   +NTLM   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   +V  A  +   M S G   +  +++ L+ G+ +   IE AL + + ML  G     
Sbjct: 192 CRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V  N L  G  ++ +VE A     +    G   D   Y TF++GLC+N ++  A+++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +    ++ D+  YN +++ LCK+G+L+ A  +   +     + D+ T+N +I ALC   +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 356 MDKARDL 362
           +++A DL
Sbjct: 372 LEEALDL 378



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   G E +V TY TLINGLC+ G T VAL +   M           +P   
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG------MRPTPK 602

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  ++  L +   +  A  LF +M +    P+ +TY  +  G C       EA    +E
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLE 662

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+D+G  P   SF ++   L   G  D   R +E++++
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIME 700


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 192/353 (54%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYNT +NGLC+  H   AL + + M     +      P+  TY  +++ LCK 
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKN 242

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++AK +  +M D    P++ T+N+LI   C  N   EA  L  ++  +GV P+V +F
Sbjct: 243 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 302

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK G    A RL E M   G  P+   YNTL+D  C  G++ +A +L   MES
Sbjct: 303 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 362

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI  + + +NTL  GL +  +++ 
Sbjct: 363 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 422

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF+L ++M   G+  +   Y + +   CK G I +A ++  T+    +E+D+  Y  LI+
Sbjct: 423 AFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 482

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+GR ++A ++ R +    +      YN ++ +L     +  A  LF +M
Sbjct: 483 GLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 535



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 194/357 (54%), Gaps = 7/357 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+VFTYN ++N LC+ G    A  +  +M +        C P+  T+ T+I  LC  
Sbjct: 224 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTG 277

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A +L  ++  + ++P+V T+N LI+  C   D + A  LF EM + G  P+ V++
Sbjct: 278 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 337

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  AEE+F  M+ 
Sbjct: 338 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 397

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K+I+ A  L ++M+S+G++P+ + YN++     +   +++
Sbjct: 398 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 457

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + + M  +G   D   Y T I+GLCK G    A+++ R +RI       +AYN ++ 
Sbjct: 458 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 517

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
            L +   ++ A  LFR +       D +TY I+   LC   G + +A D  L+M  K
Sbjct: 518 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 574



 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 194/393 (49%), Gaps = 29/393 (7%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN---------------GN 49
           +++ ++   G +P+V T+NTL+  LCR      A+ + EEM++               G 
Sbjct: 75  SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGF 134

Query: 50  GEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
            E G +              C    VT   +I+G CK G V+ A     +   +   P+ 
Sbjct: 135 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 194

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +TYN+ ++G C  +    A  +   M+ +G  P+V ++N+++N LCKNG+++EA  +L  
Sbjct: 195 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 254

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G  P+   +NTL+   C   R+  A +L   +   G   +V++++ILIN  CK  +
Sbjct: 255 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 314

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              AL L+ EM + G  PD V YNTL   L  + ++ +A  L  +M+  G    T  Y T
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 374

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDGLCK   I EA E+F  + +     +   +N LIDGLCK  ++  A+EL   +    
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           L  + +TYN ++   C  G + KA D+   M A
Sbjct: 435 LQPNNITYNSILTHYCKQGDIKKAADILETMTA 467



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 169/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ V G  P+V+T+N LIN LC+ G   +AL LFEEM N        C P+ V
Sbjct: 282 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG------CTPDEV 335

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID LC  G + KA +L   M+      + +TYN++I G C      EA+ +F +M
Sbjct: 336 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 395

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N ++FN +++ LCK+ K+D+A  L+  MI  G++PN   YN+++  +C  G +
Sbjct: 396 DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 455

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL +   M  KG++P    YN +
Sbjct: 456 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 516 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 575

Query: 301 YELDIRAYNCLIDGLCKSG 319
           +  +  ++  L +GL   G
Sbjct: 576 FIPEFSSFRMLAEGLLNLG 594



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 180/358 (50%), Gaps = 6/358 (1%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           +FG + +   YN L+N L       +  +++ EM    G  G+  KP+ VT+ T++  LC
Sbjct: 47  LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 100

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +   V  A  +  +M    + P+  T+ +L+ GF        A  +   M++ G     V
Sbjct: 101 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 160

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + NV++N  CK G++++A   ++  I  G  P+   YNT ++G C    V  A ++   M
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+  +NTL   L   +++
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A  L  ++   GV+ D + +   I+ LCK G    A+ LF  ++      D   YN L
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ID LC  G+L  A +L + +         +TYN +I  LC   ++++A ++F  M+ +
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQ 398



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 132/271 (48%), Gaps = 12/271 (4%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQ---------GVQPNVVSFNVIMNELCKNGKMDEASR 151
           ++H F    D  E + LF + +D          G+Q + V +N ++N L +  KM     
Sbjct: 19  VVHSFL---DSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLES 75

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +   M   G++P+   +NTLM   C   +V  A  +   M S G   +  +++ L+ G+ 
Sbjct: 76  VYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFV 135

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +   IE AL + + ML  G     V  N L  G  ++ +VE A     +    G   D  
Sbjct: 136 EEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQI 195

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y TF++GLC+N ++  A+++   +    ++ D+  YN +++ LCK+G+L+ A  +   +
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                + D+ T+N +I ALC   ++++A DL
Sbjct: 256 VDRGCLPDITTFNTLIAALCTGNRLEEALDL 286



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   G E +V TY TLINGLC+ G T VAL +   M           +P   
Sbjct: 457 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG------MRPTPK 510

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  ++  L +   +  A  LF +M +    P+ +TY  +  G C       EA    +E
Sbjct: 511 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLE 570

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+D+G  P   SF ++   L   G  D   R +E++++
Sbjct: 571 MVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIME 608


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 204/370 (55%), Gaps = 8/370 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPN 59
           +EA  LF ++   G  P++ T+N LI+ LC+ G+   +  LF + M  G      VC PN
Sbjct: 198 IEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG------VC-PN 250

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T+   I GLC++G +D+A  L   +  E + P+V++YN+LI GFC  +   EA+C   
Sbjct: 251 LFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLH 310

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M++ GV+PN  ++N I+N  CK G M  A ++L   +  G  P+ F Y++L++G C  G
Sbjct: 311 KMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDG 370

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +NRA  +F      G KH++  Y+ L+ G  K   +  AL L  +M+  G  PD+  YN
Sbjct: 371 DMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYN 430

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GL ++  +  A  + ++    G   D + + T IDG CK   + +A+E+  T+   
Sbjct: 431 LVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSH 490

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+  YN L++GLCK+ +L    + F+++       +++TYNI+I + C D K+ +A
Sbjct: 491 GITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEA 550

Query: 360 RDLFLDMEAK 369
            +LF +M+ +
Sbjct: 551 MELFKEMKTR 560



 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/403 (31%), Positives = 204/403 (50%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++M+++  G  P+V+T+   +   C TG    AL L   M  G G     C+ N V
Sbjct: 129 QAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMP-GQG-----CEFNAV 182

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I G  KE    +A  LF +M  + I P+++T+N LIH  C   +  E++ LF ++
Sbjct: 183 SYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKV 242

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +GV PN+ +FN+ +  LC+ G +DEA+RLLE ++  G+ P+   YNTL+ GFC   ++
Sbjct: 243 MKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKL 302

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK----------------------------- 212
             AE     M + G + N F+Y+ +ING+CK                             
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSL 362

Query: 213 ------NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                 + ++  A++++ E + KG K  +++YNTL  GL +   V +A +L  +M  HG 
Sbjct: 363 INGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGC 422

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + D W Y   ++GLCK G + +A  +           DI  +N LIDG CK   +  A E
Sbjct: 423 SPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIE 482

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  ++    +  DV+TYN +++ LC   K+D   D F  M  K
Sbjct: 483 ILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEK 525



 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 192/366 (52%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L   +   G  P+V +YNTLI G C+    + A     +M N   E      PN  
Sbjct: 269 EAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE------PNEF 322

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TII+G CK G +  A ++      +   P+  TY+SLI+G C   D N A  +F E 
Sbjct: 323 TYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEA 382

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++G + +++ +N ++  L K G + +A +L++ M++ G  P+ + YN +++G C  G +
Sbjct: 383 MEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL 442

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +     + GC  ++F+++ LI+GYCK + ++ A+ +   MLS GI PDV+ YNTL
Sbjct: 443 SDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTL 502

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++     F  M   G   +   Y   I+  CK+  + EA+ELF+ ++    
Sbjct: 503 LNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGL 562

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIMIHALCADGKMDKAR 360
             DI     LI GLC +G L  A+ELF ++ +    +     +NIMI+A C    +  A 
Sbjct: 563 TPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAE 622

Query: 361 DLFLDM 366
            LF  M
Sbjct: 623 KLFHKM 628



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 196/366 (53%), Gaps = 7/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     K+   G EPN FTYNT+ING C+ G    A  +  +        G +  P+ 
Sbjct: 303 VEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFK----GFI--PDE 356

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY+++I+GLC +G +++A  +F +  ++    +++ YN+L+ G        +A  L  +
Sbjct: 357 FTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKD 416

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM+ G  P++ ++N+++N LCK G + +A+ +L   I  G  P+ F +NTL+DG+C    
Sbjct: 417 MMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRN 476

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A E+  +M S G   +V +Y+ L+NG CK ++++  +  +  ML KG  P+++ YN 
Sbjct: 477 MDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNI 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RIL 299
           L     +  +V  A +LF EM+  G+  D     T I GLC NG + +A ELF T+ +  
Sbjct: 537 LIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEY 596

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K+      +N +I+  C    + +A +LF  +       D  TY +MI + C  G +D A
Sbjct: 597 KFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLA 656

Query: 360 RDLFLD 365
               L+
Sbjct: 657 HTFLLE 662



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 189/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++  + CEP+V +YN ++N L   G+   A  ++  M     + G+   P+  
Sbjct: 94  EAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMK----DIGIY--PDVY 147

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T  +   C  G    A  L   M  +    N V+Y ++I GF   N   EA  LF EM
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG+ P++++FN +++ LCK G + E+ +L   +++ GV PN F +N  + G C  G +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L  S+ S G   +V SY+ LI G+CK+ ++  A     +M++ G++P+   YNT+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A K+  +    G   D + Y + I+GLC +G +  A+ +F       +
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  I  YN L+ GL K G +  A +L + +       D+ TYN++++ LC  G +  A  
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANG 447

Query: 362 LFLDMEAK 369
           +  D  AK
Sbjct: 448 ILNDAIAK 455



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 19/297 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCKP 58
           ++A  L   +   GC P+++TYN ++NGLC+ G            ANG  N      C P
Sbjct: 408 LQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCL--------SDANGILNDAIAKGCIP 459

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  T+ T+IDG CK+  +DKA E+   M    I P+V+TYN+L++G C A   +     F
Sbjct: 460 DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTF 519

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M+++G  PN++++N+++   CK+ K+ EA  L + M   G+ P+     TL+ G C  
Sbjct: 520 KAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSN 579

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYS-----ILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G +++A ELFV++E    K   FSYS     I+IN +C    +  A  L+ +M      P
Sbjct: 580 GELDKAYELFVTIE----KEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAP 635

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           D   Y  +     +   ++ A     E    G+          ++ LC    + EAV
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAV 692



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 171/370 (46%), Gaps = 45/370 (12%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV- 96
           AL +F ++   +G      K    TY  +I+ L   G  +  +++  +M+ +N++  ++ 
Sbjct: 23  ALKMFNQVKTEDG-----FKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR-KNVDSKMLE 76

Query: 97  -TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
             Y  ++  +       EA  +F  M     +P+V S+N IMN L + G   +A ++   
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK-NK 214
           M  IG+ P+ + +   M  FC+TGR   A  L  +M   GC+ N  SY  +I+G+ K N 
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENC 196

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV-------- 266
           +IE A  L+ EML +GI PD++ +N L   L +   V+ + KLF ++ + GV        
Sbjct: 197 QIE-AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 267 ---------------------------AADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                                        D  +Y T I G CK+  +VEA      +   
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             E +   YN +I+G CK+G ++ A ++ R       I D  TY+ +I+ LC DG M++A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 360 RDLFLDMEAK 369
             +F +   K
Sbjct: 376 MAVFYEAMEK 385



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 127/265 (47%), Gaps = 44/265 (16%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++FT+NTLI+G C+  +   A+ + + M +     G+   P+ +TY T+++GLCK 
Sbjct: 456 GCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLS----HGIT--PDVITYNTLLNGLCKA 509

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D   + F  M ++   PN++TYN LI  FC     +EA  LF EM  +G+ P++V+ 
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTL 569

Query: 134 NVIMNELCKNGKMDEASRLL---------------------------------ELMIQIG 160
             ++  LC NG++D+A  L                                  +L  ++G
Sbjct: 570 CTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMG 629

Query: 161 ---VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                P+ + Y  ++D +C TG ++ A    +   S G   +  +   ++N  C    + 
Sbjct: 630 GSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLS 689

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ + + M+  GI P+ V  N++F
Sbjct: 690 EAVVIINLMVQNGIVPEEV--NSIF 712



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 37/290 (12%)

Query: 107 YANDWNEAKCLFIEM-MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPN 164
           Y ND   A  +F ++  + G +  + ++  ++ +L  +GK +    +L E+   +  +  
Sbjct: 16  YQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKML 75

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             VY  +M  +   G+V  A  +F  M+   C+ +V SY+ ++N   +      A  +Y 
Sbjct: 76  EGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYM 135

Query: 225 EMLSKGIKPDV-----------------------------------VIYNTLFIGLFEIH 249
            M   GI PDV                                   V Y  +  G ++ +
Sbjct: 136 RMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKEN 195

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
               A+ LFDEM + G+  D   +   I  LCK G + E+ +LF  +       ++  +N
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             I GLC+ G +  A  L  S+    L  DV++YN +I   C   K+ +A
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA 305


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 192/353 (54%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYNT +NGLC+  H   AL + + M     +      P+  TY  +++ LCK 
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKN 334

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++AK +  +M D    P++ T+N+LI   C  N   EA  L  ++  +GV P+V +F
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 394

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK G    A RL E M   G  P+   YNTL+D  C  G++ +A +L   MES
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 454

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI  + + +NTL  GL +  +++ 
Sbjct: 455 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 514

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF+L ++M   G+  +   Y + +   CK G I +A ++  T+    +E+D+  Y  LI+
Sbjct: 515 AFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 574

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+GR ++A ++ R +    +      YN ++ +L     +  A  LF +M
Sbjct: 575 GLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 194/357 (54%), Gaps = 7/357 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+VFTYN ++N LC+ G    A  +  +M +        C P+  T+ T+I  LC  
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTG 369

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A +L  ++  + ++P+V T+N LI+  C   D + A  LF EM + G  P+ V++
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  AEE+F  M+ 
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K+I+ A  L ++M+S+G++P+ + YN++     +   +++
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + + M  +G   D   Y T I+GLCK G    A+++ R +RI       +AYN ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
            L +   ++ A  LFR +       D +TY I+   LC   G + +A D  L+M  K
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 194/393 (49%), Gaps = 29/393 (7%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN---------------GN 49
           +++ ++   G +P+V T+NTL+  LCR      A+ + EEM++               G 
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGF 226

Query: 50  GEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
            E G +              C    VT   +I+G CK G V+ A     +   +   P+ 
Sbjct: 227 VEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQ 286

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +TYN+ ++G C  +    A  +   M+ +G  P+V ++N+++N LCKNG+++EA  +L  
Sbjct: 287 ITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQ 346

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G  P+   +NTL+   C   R+  A +L   +   G   +V++++ILIN  CK  +
Sbjct: 347 MVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
              AL L+ EM + G  PD V YNTL   L  + ++ +A  L  +M+  G    T  Y T
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDGLCK   I EA E+F  + +     +   +N LIDGLCK  ++  A+EL   +    
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           L  + +TYN ++   C  G + KA D+   M A
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTA 559



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 169/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ V G  P+V+T+N LIN LC+ G   +AL LFEEM N        C P+ V
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG------CTPDEV 427

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID LC  G + KA +L   M+      + +TYN++I G C      EA+ +F +M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 487

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N ++FN +++ LCK+ K+D+A  L+  MI  G++PN   YN+++  +C  G +
Sbjct: 488 DLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL +   M  KG++P    YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 301 YELDIRAYNCLIDGLCKSG 319
           +  +  ++  L +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 6/356 (1%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           +FG + +   YN L+N L       +  +++ EM    G  G+  KP+ VT+ T++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +   V  A  +  +M    + P+  T+ +L+ GF        A  +   M++ G     V
Sbjct: 193 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + NV++N  CK G++++A   ++  I  G  P+   YNT ++G C    V  A ++   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+  +NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A  L  ++   GV+ D + +   I+ LCK G    A+ LF  ++      D   YN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ID LC  G+L  A +L + +         +TYN +I  LC   ++++A ++F  M+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 2/307 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P    Y  II  L   G +D  K L  +M+ E     +   +S +  +     +++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 118 FIEMMDQ--GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +  +    G+Q + V +N ++N L +  KM     +   M   G++P+   +NTLM   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   +V  A  +   M S G   +  +++ L+ G+ +   IE AL + + ML  G     
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V  N L  G  ++ +VE A     +    G   D   Y TF++GLC+N ++  A+++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +    ++ D+  YN +++ LCK+G+L+ A  +   +     + D+ T+N +I ALC   +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 356 MDKARDL 362
           +++A DL
Sbjct: 372 LEEALDL 378



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   G E +V TY TLINGLC+ G T VAL +   M           +P   
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG------MRPTPK 602

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  ++  L +   +  A  LF +M +    P+ +TY  +  G C       EA    +E
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLE 662

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+D+G  P   SF ++   L   G  D   R +E++++
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIME 700


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 189/359 (52%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC PNVF+Y+ ++ GLC    +  AL+LF+ MA   G     C PN V Y T
Sbjct: 215 LLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGG----ACSPNVVAYNT 270

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G  KEG   KA  LF +M  + + P+VVTYN +I   C A   ++A+ +  +M   G
Sbjct: 271 VIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNG 330

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            QP+ V++N +++     G++ EA+++   M   G+ PN  + N+ +   C  GR   A 
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F SM + G K ++ SY  L++GY         + L++ M S GI  D  ++N L    
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   V+ A  +F EMQ+ GV+ D   Y T I    + G + +A+E F  +     + + 
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y+ +I G C  G L  A EL   +  +G+   D+V +N +I++LC DG++  A D+F
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIF 569



 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 200/364 (54%), Gaps = 7/364 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            LF  ++  G   +   +N LI+   + G    A+ +F EM     + GV   P+ VTY+
Sbjct: 426 GLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQ----QQGV--SPDVVTYS 479

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I    + G +  A E F +M    I PN   Y+S+I GFC      +AK L  EM+++
Sbjct: 480 TVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINK 539

Query: 125 GV-QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           G+ +P++V FN ++N LCK+G++ +A  + +L+  IG RP+   + +L+DG+CL G++++
Sbjct: 540 GIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDK 599

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A ++  +ME +G + ++ +YS L++GY KN  I   L+L+ EM  KG+KP+ V Y  +  
Sbjct: 600 AFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLA 659

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GLF   +   A K F EM   G       Y   + GLC+N    EA+ LF+ L  +  + 
Sbjct: 660 GLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKF 719

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            I   N +I+ + K  R + A ELF ++    L+ +  TY +MI  L  DG ++ A ++F
Sbjct: 720 SITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMF 779

Query: 364 LDME 367
             ME
Sbjct: 780 SSME 783



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 174/355 (49%), Gaps = 9/355 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
            V TY+ L++  CR     + L LF  +           K + +T +T++  LC     +
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTG------LKIHQITASTLLKCLCYANRTE 209

Query: 78  KAKELFL-KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG--VQPNVVSFN 134
           +A  + L +M +    PNV +Y+ ++ G C  +    A  LF  M  +G    PNVV++N
Sbjct: 210 EAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYN 269

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++   K G+  +A  L   M + GV+P+   YN ++D  C    +++AE +   M + 
Sbjct: 270 TVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTN 329

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G + +  +Y+ +I+GY     ++ A  ++ +M S+G+ P++VI N+    L +  + + A
Sbjct: 330 GAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEA 389

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            ++FD M   G   D  +Y T + G    G+  + + LF +++      D R +N LI  
Sbjct: 390 AEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHA 449

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             K G +  A  +F  + +  +  DVVTY+ +I A    G++  A + F  M A+
Sbjct: 450 YAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVAR 504



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 143/277 (51%), Gaps = 12/277 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P++  +N++IN LC+ G  + A ++F+ +    GE     +P+ +T+T++IDG C  G 
Sbjct: 543 RPDIVFFNSVINSLCKDGRVMDAHDIFD-LVTDIGE-----RPDVITFTSLIDGYCLVGK 596

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +DKA ++   M+   +  ++VTY++L+ G+      N+   LF EM  +GV+PN V++ +
Sbjct: 597 MDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  L + G+   A +    MI+ G      +Y  ++ G C   R N A+E  +  + +G
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC---RNNCADEAIILFQKLG 713

Query: 196 CKHNVFSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             +  FS +IL   IN   K +  E A  L++ + + G+ P+   Y  + I L +   VE
Sbjct: 714 TMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVE 773

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            A  +F  M++ G+   +      I  L + G I +A
Sbjct: 774 DANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 126/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +F  +   G  P+V T+ +LI+G C  G    A  + + M        V  + + 
Sbjct: 563 MDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEV------VGVETDI 616

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T++DG  K G ++    LF +M+ + + PN VTY  ++ G   A     A+  F E
Sbjct: 617 VTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G    V  + +I+  LC+N   DEA  L + +  + V+ +  + NT+++      R
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A+ELF ++ + G   N  +Y ++I    K+  +E A +++S M   GI P   + N 
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 241 LFIGLFEIHQVERA 254
           +   L E  ++ +A
Sbjct: 797 IIRMLLEKGEIAKA 810



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 29/178 (16%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------FGVVC 56
           LF +++  G +PN  TY  ++ GL R G T+ A   F EM                G +C
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697

Query: 57  KPN-------------------TVT-YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           + N                   ++T   T+I+ + K    ++AKELF  +    + PN  
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           TY  +I          +A  +F  M   G+ P     N I+  L + G++ +A   L 
Sbjct: 758 TYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLS 815


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/350 (32%), Positives = 192/350 (54%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   +N L+NG  + G    A+ +FE+M            P+ +TY  +I   C+ 
Sbjct: 381 GIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRG------LNPDVLTYLAVIHAFCRM 434

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A + F  M D+ + PN   Y  LI GFC   D  +A+ L  E+ ++G+ P ++SF
Sbjct: 435 GSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSF 494

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N LCK G++ EA R+ +++I+ G + +  ++ +L+DG+CL G+++ A  +  +M S
Sbjct: 495 ASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVS 554

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G + ++ +Y  L+NG CKN  I+  L L+ E+L KG+KP    Y  +  GLF   +   
Sbjct: 555 VGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAA 614

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++F EM   G+A     Y   + GLC+N    EA+ +F+ L  +  + DI   N +I 
Sbjct: 615 AKEMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMIS 674

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            + K+ R + A  LF S+P   L+  V TY IM+  L  +G +++A  +F
Sbjct: 675 KMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVF 724



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 190/358 (53%), Gaps = 4/358 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF ++   GC P+  +Y+T++  +C  G +  AL++        G     C  N V Y+T
Sbjct: 161 LFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVKQGGG----CPCNVVVYST 216

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GL KEG V +A +LF +M  + + PNVVTYNS+IH  C A   ++A+ +  +M+  G
Sbjct: 217 VVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNG 276

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           VQP+ V++N +++     G+  +A R+ + M   GV PN    +T +   C  GR+  A 
Sbjct: 277 VQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAR 336

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E F SM + G K N+ SYS L++GY     +    +L++ M+  GI P+  ++N L  G 
Sbjct: 337 EFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGY 396

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   V  A  +F++MQ+ G+  D   Y   I   C+ G + +A++ F  +     E + 
Sbjct: 397 AKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNF 456

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y CLI G C  G L  A EL   +    L   ++++  +I+ LC +G++ +A+ +F
Sbjct: 457 AVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF 514



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 193/385 (50%), Gaps = 41/385 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+  TYNTLI+G    G    A+ +F+EM +     GV+  PNTVT +T +  LCK 
Sbjct: 276 GVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSR----GVI--PNTVTCSTFVAFLCKH 329

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA-------NDWN-------------- 112
           G +++A+E F  M  +    N+++Y++L+HG+  A       N +N              
Sbjct: 330 GRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVF 389

Query: 113 --------------EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                         EA  +F +M  +G+ P+V+++  +++  C+ G MD+A      MI 
Sbjct: 390 NILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMID 449

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            GV PN  VY  L+ GFC  G + +AEEL   + + G    + S++ LIN  CK   +  
Sbjct: 450 KGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFE 509

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  ++  ++  G K DV I+ +L  G   I ++  AF++ D M   G+  D   Y T ++
Sbjct: 510 AQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVN 569

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G CKNG I + + LFR L     +     Y  ++DGL  +GR   A E+F+ +    +  
Sbjct: 570 GCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAV 629

Query: 339 DVVTYNIMIHALCADGKMDKARDLF 363
            + TY+I++  LC +   ++A  +F
Sbjct: 630 TIPTYSILLTGLCRNNCTEEAITVF 654



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  PNV TYN++I+ LC+      A  +  +M  GNG      +P+ V
Sbjct: 229 EACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMV-GNG-----VQPDNV 282

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I G    G   +A  +F +M    + PN VT ++ +   C      EA+  F  M
Sbjct: 283 TYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSM 342

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G + N++S++ +++     G + + S L  LM++ G+ PN  V+N L++G+   G V
Sbjct: 343 LAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMV 402

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M+  G   +V +Y  +I+ +C+   ++ A+  ++ M+ KG++P+  +Y  L
Sbjct: 403 REAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCL 462

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      + +A +L  E++  G+     ++ + I+ LCK G + EA  +F  +     
Sbjct: 463 IQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGE 522

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  +  LIDG C  G++  A+ +  ++    +  D+VTY  +++  C +G++D    
Sbjct: 523 KADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLI 582

Query: 362 LFLDMEAK 369
           LF ++  K
Sbjct: 583 LFRELLHK 590



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 179/368 (48%), Gaps = 40/368 (10%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           +A+ LF  M+ G G    V  P   TY+ +ID  C+   +D A   F  +  + +  +V+
Sbjct: 82  LAVALFNRMSTGTGP--RVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 97  TYNSLIHGFCYANDWNEA-KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
             +SL+ G C A   +EA   LF  M + G  P+ +S++ ++  +C +G+   A  +L +
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 156 MI-QIGVRP-NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
            + Q G  P N  VY+T++ G    G+V  A +LF  M   G   NV +Y+ +I+  CK 
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + ++ A  +  +M+  G++PD V YNTL  G   + Q ++A ++F EM   GV  +T   
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY------------------------- 308
            TF+  LCK+G I EA E F ++    ++L+I +Y                         
Sbjct: 320 STFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVR 379

Query: 309 ----------NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                     N L++G  K G ++ A  +F  + +  L  DV+TY  +IHA C  G MD 
Sbjct: 380 DGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDD 439

Query: 359 ARDLFLDM 366
           A D F  M
Sbjct: 440 AMDKFNHM 447



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 159/311 (51%), Gaps = 12/311 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTVTYTTIIDGLCK 72
           G EPN   Y  LI G C  G  + A  L  E+ N G G       P  +++ ++I+ LCK
Sbjct: 451 GVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLG-------PCILSFASLINHLCK 503

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V +A+ +F  +       +V  + SLI G+C     +EA  +   M+  G++P++V+
Sbjct: 504 EGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVT 563

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++N  CKNG++D+   L   ++  GV+P  F Y  ++DG    GR   A+E+F  M 
Sbjct: 564 YGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI 623

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G    + +YSIL+ G C+N   E A++++ ++ +  +K D+VI N +   +F+  + E
Sbjct: 624 ESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRRE 683

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY--NC 310
            A  LF  +  +G+      Y   ++ L K G + EA  +F  +  LK  L   ++  N 
Sbjct: 684 EAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVM--LKSGLSPTSHFINV 741

Query: 311 LIDGLCKSGRL 321
           ++  L + G +
Sbjct: 742 IVRTLLEKGEI 752



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 140/289 (48%), Gaps = 6/289 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++R  G  P + ++ +LIN LC+ G    A  +F +M    GE     K + 
Sbjct: 473 VKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF-DMIIRTGE-----KADV 526

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             +T++IDG C  G + +A  +   M    I P++VTY +L++G C     ++   LF E
Sbjct: 527 NIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRE 586

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +GV+P   ++ +I++ L   G+   A  + + MI+ G+      Y+ L+ G C    
Sbjct: 587 LLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNNC 646

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  +F  + +M  K ++   +I+I+   K +  E A  L++ +   G+ P V  Y  
Sbjct: 647 TEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTI 706

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           +   L +   VE A  +F  M + G++  +      +  L + G IV+A
Sbjct: 707 MMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKA 755



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 103/213 (48%), Gaps = 7/213 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF +L   G +P  FTY  +++GL   G T  A  +F+EM     E G+       TY+ 
Sbjct: 583 LFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMI----ESGIAV--TIPTYSI 636

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GLC+    ++A  +F K+   N+  ++V  N +I     A    EA+ LF  + D G
Sbjct: 637 LLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYG 696

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P V ++ ++M  L K G ++EA  +  +M++ G+ P +   N ++      G + +A 
Sbjct: 697 LVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAG 756

Query: 186 ELFVSMESMGCKHNVFSYSILINGY-CKNKEIE 217
                ++         + S+L++ + CK K  E
Sbjct: 757 IYMCRVDGKSILFEASTASMLLSLFSCKGKHRE 789


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/359 (32%), Positives = 190/359 (52%), Gaps = 8/359 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A A+F  +   GC P+V TY+ L++  C+      A+ L +EM A G       C+P+ 
Sbjct: 269 DALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKG-------CEPDI 321

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I+ +C EG VD+A  +   +      P+ VTY  ++   C +  W E + L  E
Sbjct: 322 VTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAE 381

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+ V+FN I+  LC+ G +D A  +++ M + G   +   Y++++DG C  GR
Sbjct: 382 MTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGR 441

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A EL   ++S GCK +  +Y+ ++ G C  ++ E A  L +EML     PD V +NT
Sbjct: 442 VDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNT 501

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L +   V+RA ++ ++M  +G + D   Y   IDGLC    I +A+EL   L+   
Sbjct: 502 VVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCG 561

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            + DI  +N L+ GLC   R + A +L  ++ R     D +T+N +I +LC  G + +A
Sbjct: 562 CKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQA 620



 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 193/397 (48%), Gaps = 43/397 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++R  GCEP++ TYN LIN +C  G    ALN+   + +        CKP+ V
Sbjct: 304 QAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHG------CKPDAV 357

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++  LC      + +EL  +M   N  P+ VT+N+++   C     + A  +   M
Sbjct: 358 TYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM 417

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G   ++V+++ I++ LC  G++D+A  LL  +   G +P+   Y T++ G C T + 
Sbjct: 418 SEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQW 477

Query: 182 NRAEELFVSM--------------------------------ESM---GCKHNVFSYSIL 206
            RAEEL   M                                E M   GC  ++ +Y+ +
Sbjct: 478 ERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCI 537

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C    I+ A+ L S++ S G KPD+V +NTL  GL  + + E A +L   M R   
Sbjct: 538 IDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNC 597

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   + T I  LC+ G + +A+E  + +       +   Y+ ++D L K+G+ + A E
Sbjct: 598 PPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALE 657

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L   +  G    D++TYN +I  L   GKM++A DL 
Sbjct: 658 LLSGMTNGT--PDLITYNTVISNLTKAGKMEEALDLL 692



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 172/350 (49%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ FT+N LI  LC  G    AL +F++M +        C P+ VTY+ ++D  CKE   
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRG------CSPSVVTYSILLDATCKESGY 302

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  L  +M+ +   P++VTYN LI+  C   D +EA  +   +   G +P+ V++  +
Sbjct: 303 RQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPV 362

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC + +  E   LL  M      P+   +NT++   C  G V+RA E+   M   GC
Sbjct: 363 LKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGC 422

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +YS +++G C    ++ A+ L S + S G KPD + Y T+  GL    Q ERA +
Sbjct: 423 VADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEE 482

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  EM       D   + T +  LC+ G +  A+ +   +       DI  YNC+IDGLC
Sbjct: 483 LMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLC 542

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               +  A EL   L       D+VT+N ++  LC   + + A  L  +M
Sbjct: 543 NESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANM 592



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 187/365 (51%), Gaps = 8/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +L+ +GC+P+   Y T++ GLC T     A  L  EM   +      C P+ V
Sbjct: 444 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSD------CPPDEV 497

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T++  LC++G VD+A  +  +M +   +P++VTYN +I G C  +  ++A  L  ++
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL 557

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++V+FN ++  LC   + ++A +L+  M++    P+   +NT++   C  G +
Sbjct: 558 QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLL 617

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E    M   GC  N  +YSI+++   K  + + AL L S M +    PD++ YNT+
Sbjct: 618 TQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTV 675

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  ++E A  L   M  +G+  DT  YR+   G+C+      AV + R ++    
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGL 735

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN ++ G C+  R  +A + F  +     + D  TY I++ AL   G +D+A+ 
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKR 795

Query: 362 LFLDM 366
           L   +
Sbjct: 796 LLASL 800



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 172/365 (47%), Gaps = 37/365 (10%)

Query: 26  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKP--------------------------- 58
           +  L + G    AL LF+ MA+G G     C P                           
Sbjct: 157 LRSLVQRGEIDEALVLFDSMASGGGRN---CPPVVPCNILIKRLCSDGRVSDAERVFAAL 213

Query: 59  ----NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
                 VTY T+++G C+ G ++ A+ L   M      P+  T+N LI   C      +A
Sbjct: 214 GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDA 270

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             +F +M+ +G  P+VV+++++++  CK     +A  LL+ M   G  P+   YN L++ 
Sbjct: 271 LAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINA 330

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C  G V+ A  +  ++ S GCK +  +Y+ ++   C ++  +    L +EM S    PD
Sbjct: 331 MCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPD 390

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
            V +NT+   L +   V+RA ++ D M  HG  AD   Y + +DGLC  G + +AVEL  
Sbjct: 391 EVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLS 450

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L+    + D  AY  ++ GLC + + + A EL   +       D VT+N ++ +LC  G
Sbjct: 451 RLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKG 510

Query: 355 KMDKA 359
            +D+A
Sbjct: 511 LVDRA 515



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 8/265 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   L+  GC+P++ T+NTL+ GLC       A  L   M   N      C P+ +
Sbjct: 549 DAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN------CPPDEL 602

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I  LC++G + +A E    M +    PN  TY+ ++     A     A  L   M
Sbjct: 603 TFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +    P+++++N +++ L K GKM+EA  LL +M+  G+ P+   Y +L  G C     
Sbjct: 663 TNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGT 720

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  +   ++  G   +   Y+ ++ G+C+++  + A+  ++ M+S G  PD   Y  L
Sbjct: 721 DRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVIL 780

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
              L     ++ A +L   +   GV
Sbjct: 781 LEALAYGGLLDEAKRLLASLCSLGV 805



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 212 KNKEIEGALSLYSEMLSKGIK--PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +  EI+ AL L+  M S G +  P VV  N L   L    +V  A ++F  +   G +A 
Sbjct: 162 QRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSAT 218

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y T ++G C+ G I +A  L   +    +  D   +N LI  LC  GR+  A  +F 
Sbjct: 219 VVTYNTMVNGYCRAGRIEDARRLINGM---PFPPDTFTFNPLIRALCVRGRIPDALAVFD 275

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +        VVTY+I++ A C +    +A  L  +M AK
Sbjct: 276 DMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAK 315


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/363 (35%), Positives = 196/363 (53%), Gaps = 14/363 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF  +    C P++ TYN L++G C+ G T  A +L +E+     E      PN  
Sbjct: 194 EAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE------PNVF 244

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ II+  CK   V++A E+F+KM + N  PN VT+N+LI GFC A    +A  LF EM
Sbjct: 245 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 304

Query: 122 MDQGVQPNVVSFNVIMNELCKN-GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              G +  +V++N +++ LCK  G +  A  L   +   G+ P    YN+L+ GFC   R
Sbjct: 305 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A + F  ME   C  NV +YSILI+G CK + ++ A     +M + G  P VV Y  
Sbjct: 365 LSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGG 423

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +++ A   F++M+  G A +T  + T IDGLCK     + + L   +    
Sbjct: 424 LINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEG 483

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D+  YNCLI GLC + R++ A  LF  +       +V T+N +I  LCA  K+++AR
Sbjct: 484 CKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEAR 540

Query: 361 DLF 363
           ++ 
Sbjct: 541 NIL 543



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/372 (33%), Positives = 187/372 (50%), Gaps = 15/372 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F  ++  G  PN  T NTL+ GLC  G    AL LF EM  G         P + 
Sbjct: 50  QAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGP------FLPTSA 103

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY----ANDWNEAKCL 117
           ++  ++ G    G V  A      M+  + +    TYN ++ G C+    AN   +A   
Sbjct: 104 SHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEF 163

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM   GV+P++ S++++++ L  +G+M EA  L   M      P+   YN LMDG+C 
Sbjct: 164 FKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCK 220

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+   A+ L   +   G + NVF+YSI+IN YCK  ++E A  ++ +M+     P+ V 
Sbjct: 221 IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVT 280

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEAVELFRTL 296
           +NTL  G  +   +E A KLF EM++ G  A    Y T ID LCK  G +  AV+LF  L
Sbjct: 281 FNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                   I  YN LI G C + RL  A + F  +  G    +V+TY+I+I  LC   +M
Sbjct: 341 EGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM-EGKCAPNVITYSILIDGLCKVRRM 399

Query: 357 DKARDLFLDMEA 368
            +A     DM+A
Sbjct: 400 KEAAKTLEDMKA 411



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 188/366 (51%), Gaps = 11/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F +++  G EP++ +Y+ L++ L  +G    A  LF  M          C P+ +
Sbjct: 159 QAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAM---------TCSPDIM 209

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++DG CK G   +A+ L  ++      PNV TY+ +I+ +C  +   EA  +F++M
Sbjct: 210 TYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 269

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT-GR 180
           ++    PN V+FN ++   CK G +++A +L   M +IG +     YNTL+D  C   G 
Sbjct: 270 IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG 329

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A +LF  +E  G    + +Y+ LI G+C  + +  A+  + EM  K   P+V+ Y+ 
Sbjct: 330 VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSI 388

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++ +++ A K  ++M+ HG       Y   I+G CK G +  A+  F  +++  
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   +N LIDGLCK+ R      L   +       DV+TYN +I  LC+  +++ A+
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 508

Query: 361 DLFLDM 366
            LF  M
Sbjct: 509 RLFDGM 514



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 183/373 (49%), Gaps = 15/373 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI----VALNLFEEMANGNGEFGVVCK 57
           +A A    +R         TYN ++ GLC    +      A+  F+EM     E      
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVE------ 173

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  +Y  ++  L   G + +A  LF  M     +P+++TYN L+ G+C      EA+ L
Sbjct: 174 PDLESYHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSL 230

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             E++  G +PNV ++++I+N  CK  K++EA  +   MI+    PNA  +NTL+ GFC 
Sbjct: 231 MKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCK 290

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPDVV 236
            G +  A +LF  ME +GCK  + +Y+ LI+  CK +  +  A+ L++++   G+ P +V
Sbjct: 291 AGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIV 350

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN+L  G  +  ++  A + FDEM+    A +   Y   IDGLCK   + EA +    +
Sbjct: 351 TYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDM 409

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +   Y   +  Y  LI+G CK G LK A   F  +       + V +N +I  LC   + 
Sbjct: 410 KAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERA 469

Query: 357 DKARDLFLDMEAK 369
           +    L   M A+
Sbjct: 470 NDGLRLLCHMHAE 482



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 148/307 (48%), Gaps = 7/307 (2%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            ++ GL      D+A  LF ++      PN  TYN LI GFC     ++A  +F +M   
Sbjct: 2   ALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS 61

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN  + N ++  LC+ G+M  A +L   M      P +  +N L+ GF + GRV  A
Sbjct: 62  GLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDA 121

Query: 185 EELFVSMESMGCKHNVFSYSILINGYC-KNKE---IEGALSLYSEMLSKGIKPDVVIYNT 240
                 M          +Y++++ G C +NK    +E A+  + EM + G++PD+  Y+ 
Sbjct: 122 LAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHI 181

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L +  ++  A  LF  M     + D   Y   +DG CK G   EA  L + +    
Sbjct: 182 LLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           YE ++  Y+ +I+  CK  +++ AWE+F  +     + + VT+N +I   C  G ++ A 
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAI 298

Query: 361 DLFLDME 367
            LF +ME
Sbjct: 299 KLFAEME 305



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/233 (28%), Positives = 116/233 (49%), Gaps = 7/233 (3%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ L    K D+A RL + ++     PNA  YN L+ GFC  G++++A  +F  M+S
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  + + L+ G C+  ++  AL L+ EM +    P    +N L  G F   +V  
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLC----KNGYIVEAVELFRTLRILKYELDIRAYN 309
           A     +M++   +  T  Y   + GLC        + +A+E F+ ++    E D+ +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            L+  L  SGR+  A  LF ++       D++TYN+++   C  G+  +A+ L
Sbjct: 181 ILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSL 230



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 60/153 (39%), Positives = 78/153 (50%), Gaps = 9/153 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA     ++  G  P V TY  LING C+ G    AL  FE+M          C PNTV
Sbjct: 401 EAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG------CAPNTV 454

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T+IDGLCK    +    L   M  E   P+V+TYN LI G C AN   +A+ LF  M
Sbjct: 455 IFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM 514

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
                 PNV +FN ++  LC   K++EA  +L+
Sbjct: 515 ---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 193/369 (52%), Gaps = 10/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           EA  L+ ++    C  +  + + LI GLCR      A  LF+EM    +G +    KP+ 
Sbjct: 134 EALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW----KPDV 189

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +IDG CK G ++KA ++   M+     PNVVTY+SL+HG C A D ++A  LF  
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  PNVV++  +++ LC   K+D A  L++ M       +   YN L+DG+C  GR
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYN 239
           +  A++LF  M +  C  +  +Y+ L+ G+C    +E A  L   M  + GI PDVV Y+
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  G     +   A +   EM    VA +   Y + IDGLCK G +  A+E+ + +   
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVD-- 427

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+  Y  +I+GLC + R + A  L   +    +   V T+N +I ALC  G MD+A
Sbjct: 428 --KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485

Query: 360 RDLFLDMEA 368
             L + M A
Sbjct: 486 WKLLVAMAA 494



 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 201/388 (51%), Gaps = 35/388 (9%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------------NGEFGVVCK 57
           PN  TYN ++NGLC+   T  A  + +EM +G                    GE    C+
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 58  ------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
                       P+ VTYT+++DGLC++G +D+A E+  +MK + + P+  T+++LI G+
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL---LELMIQIGVR 162
           C A   +EA  L+ E++    + + VS + ++  LC+  ++ EA  L   +E+      +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+   Y  L+DGFC +G + +A ++   ME   C  NV +YS L++G CK  +++ AL L
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +  M SKG  P+VV Y TL  GL   H+V+ A  L DEM      ADT +Y   +DG C+
Sbjct: 247 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCR 306

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI-ADVV 341
            G I EA +LF+ +       D   Y CL+ G C + RL+ A  L  ++     I  DVV
Sbjct: 307 LGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVV 366

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
           TY+I++       +  +A +   +M A+
Sbjct: 367 TYSIVVAGYSRAKRFVEAAEFIQEMIAR 394



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 182/338 (53%), Gaps = 18/338 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   GC PNV TY TLI+GLC       A  L +EM          C  +TV
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT------ATCCPADTV 295

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++DG C+ G +++AK+LF +M  ++  P+ +TY  L+ GFC A+   EA+ L   M
Sbjct: 296 SYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENM 355

Query: 122 -MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               G+ P+VV++++++    +  +  EA+  ++ MI   V PNA  Y++L+DG C  GR
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGR 415

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           VN A E+  +++    K +V +Y+I+I G C     E AL+L  EM++K ++P V  +N+
Sbjct: 416 VNHAMEVLKNVD----KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNS 471

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L  +  ++ A+KL   M  HG+      Y T ++G  + G +  A ELF  +R   
Sbjct: 472 VIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKA 531

Query: 301 YE-------LDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            +       +  +A++ LI GLCK+  +  A  +   L
Sbjct: 532 KKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEEL 569



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 201/410 (49%), Gaps = 48/410 (11%)

Query: 2   EAAALF--MKLRVFGC-EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           EA  LF  M++R  G  +P+V TY  LI+G C++G+   A+ +   M       G  C P
Sbjct: 169 EAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVME------GRKCVP 222

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N VTY++++ GLCK G +D+A +LF +M  +   PNVVTY +LIHG C A+  + A+ L 
Sbjct: 223 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 282

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM       + VS+N +++  C+ G+++EA +L + M      P+   Y  L+ GFC  
Sbjct: 283 DEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNA 342

Query: 179 GRVNRAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI------ 231
            R+  A  L  +M++  G   +V +YSI++ GY + K    A     EM+++ +      
Sbjct: 343 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 402

Query: 232 -------------------------KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                    KPDVV Y  +  GL    + E A  L +EM    V
Sbjct: 403 YSSLIDGLCKAGRVNHAMEVLKNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRV 462

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                 + + I  LC+ G + EA +L   +     E  +  Y  L++G  ++GR++IA+E
Sbjct: 463 EPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYE 522

Query: 327 LF----RSLPRGVLIADVV---TYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF    R   +    A++V    ++ +I  LC   ++DKA  +  ++ ++
Sbjct: 523 LFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSR 572



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 183/392 (46%), Gaps = 49/392 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII------ 67
           G  P+V TY ++++GLCR G    A  +  EM     E      P+  T++ +I      
Sbjct: 76  GMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVE------PDKFTFSALITGWCNA 129

Query: 68  -----------------------------DGLCKEGFVDKAKELFLKM---KDENINPNV 95
                                         GLC+E  + +A ELF +M   +D    P+V
Sbjct: 130 RKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDV 189

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           VTY +LI GFC + +  +A  +   M  +   PNVV+++ +++ LCK G +D+A  L   
Sbjct: 190 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 249

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G  PN   Y TL+ G C   +V+ A  L   M +  C  +  SY+ L++GYC+   
Sbjct: 250 MTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYR 274
           IE A  L+ EM +K   PD + Y  L  G     ++E A  L + M+   G+  D   Y 
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
             + G  +    VEA E  + +       +   Y+ LIDGLCK+GR+  A E+ +++ + 
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK- 428

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               DVVTY I+I  LC   + ++A  L  +M
Sbjct: 429 ---PDVVTYTIVIEGLCGTDRTEEALTLLEEM 457



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 165/285 (57%), Gaps = 5/285 (1%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-QGVQPNVVSFNVIMNELCKNGKMD 147
           E + PN  TYN +++G C A   ++A  +  EM D + V P++V+++ ++N  CK G+MD
Sbjct: 3   EFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMD 62

Query: 148 EASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            A  +L E++ + G+ P+   Y +++DG C  G+++RA E+   M+  G + + F++S L
Sbjct: 63  RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+C  ++++ AL LY E+L+   + D V  + L  GL    ++  A++LF EM+    
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182

Query: 267 AA---DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            A   D   Y   IDG CK+G + +A+++   +   K   ++  Y+ L+ GLCK+G L  
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 242

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           A +LFR +     + +VVTY  +IH LCA  K+D AR L  +M A
Sbjct: 243 ALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 139/261 (53%), Gaps = 19/261 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V TY+ ++ G  R    + A    +EM   N        PN VTY+++IDGLCK 
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARN------VAPNAVTYSSLIDGLCKA 413

Query: 74  GFVDKAKELFLKMKDENIN-PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G V+ A E+      +N++ P+VVTY  +I G C  +   EA  L  EM+++ V+P+V +
Sbjct: 414 GRVNHAMEVL-----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGT 468

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN ++  LC+ G MDEA +LL  M   G+ P    Y TL++GF  TGR+  A ELF  M 
Sbjct: 469 FNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 528

Query: 193 SMGCKHNVF-------SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
               K +         ++S LI G CK +EI+ A+++  E+ S+  +P       +  GL
Sbjct: 529 RKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGL 588

Query: 246 FEIHQVERAFKLFDEMQRHGV 266
               + E A KL + + + G+
Sbjct: 589 LRAGRTEEAGKLINSISKVGL 609


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 124/357 (34%), Positives = 193/357 (54%), Gaps = 6/357 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L+  G  PNV  Y TLI+G C+ G    A   F++M    GE G+V   N  T+T +I+G
Sbjct: 188 LQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKM----GEMGLVA--NQYTFTVLING 241

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           L K+G      +LF KMK   + PN+ TYN L++ +C       A  LF EM ++GV+ N
Sbjct: 242 LFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEAN 301

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV++N ++  +C+  ++ EA +L++ M +  V PN   YNTL+ GFC  G +++A  L  
Sbjct: 302 VVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLD 361

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            ++S G   ++ +Y+ILI GY K    +G   L  EM  +GI P  V    L      + 
Sbjct: 362 QLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQ 421

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           ++E+AF+++  M++ G+  D + Y   I GLC  G + E+ +LFR++  +  E     YN
Sbjct: 422 EMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYN 481

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +I G CK      A  L R +    L+ +V +Y+ +I  LC DGK ++A  L   M
Sbjct: 482 TMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM 538



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 176/350 (50%), Gaps = 9/350 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN+F  N+L+  L R+       N FE+      E     K +  ++  +I G C+ G +
Sbjct: 128 PNIF--NSLLGSLVRS-------NCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNL 178

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DK+ +L   ++D  ++PNVV Y +LI G C   D   A+  F +M + G+  N  +F V+
Sbjct: 179 DKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVL 238

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N L K G   +   L E M   G+ PN + YN LM+ +C  G++ RA +LF  M   G 
Sbjct: 239 INGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGV 298

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV +Y+ LI G C+ + +  A  L  +M    + P+++ YNTL  G  ++  +++A  
Sbjct: 299 EANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASS 358

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D+++ +G++     Y   I+G  K G      +L R +              LID   
Sbjct: 359 LLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYV 418

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +   ++ A++++ S+ +  L+ DV  Y ++IH LC  G M ++  LF  M
Sbjct: 419 RLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSM 468



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 165/327 (50%), Gaps = 11/327 (3%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +E A LF  K+   G   N +T+  LINGL + G      +LFE+M   NG F     PN
Sbjct: 213 IERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKI-NGLF-----PN 266

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY  +++  C EG + +A +LF +M++  +  NVVTYN+LI G C      EA+ L  
Sbjct: 267 LYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVD 326

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M    V PN++++N ++   C  G +D+AS LL+ +   G+ P+   YN L++G+   G
Sbjct: 327 QMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAG 386

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
                 +L   ME  G   +  + ++LI+ Y + +E+E A  +YS M   G+ PDV +Y 
Sbjct: 387 NWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYG 446

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GL     ++ + KLF  M    V      Y T I G CK      A+ L R +   
Sbjct: 447 VLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAK 506

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWE 326
               ++ +Y+ +I  LCK G+    WE
Sbjct: 507 GLVPNVASYSSIIGVLCKDGK----WE 529



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 168/313 (53%), Gaps = 10/313 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF K+++ G  PN++TYN L+N  C  G    A +LF+EM     E GV  + N VTY T
Sbjct: 254 LFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMR----ERGV--EANVVTYNT 307

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G+C+E  V +A++L  +MK   ++PN++TYN+LI GFC   + ++A  L  ++   G
Sbjct: 308 LIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNG 367

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P++V++N+++    K G     + L   M   G+ P+      L+D +     + +A 
Sbjct: 368 LSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAF 427

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +++ SME  G   +V+ Y +LI+G C    ++ +  L+  M    ++P  VIYNT+  G 
Sbjct: 428 QIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGY 487

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +     RA +L  EM+  G+  +  +Y + I  LCK+G   EA  L   +     EL +
Sbjct: 488 CKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKM----IELQL 543

Query: 306 RAYNCLIDGLCKS 318
           +    +++ + K+
Sbjct: 544 KPSASILNMISKA 556



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 129/274 (47%), Gaps = 41/274 (14%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++R  G E NV TYNTLI G+CR      A  L ++M            PN +T
Sbjct: 286 AFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA------AVSPNLIT 339

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I G C  G +DKA  L  ++K   ++P++VTYN LI G+  A +W     L  EM 
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399

Query: 123 DQGVQPNVVS-----------------------------------FNVIMNELCKNGKMD 147
            +G+ P+ V+                                   + V+++ LC  G M 
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           E+S+L   M ++ V P+  +YNT++ G+C      RA  L   ME+ G   NV SYS +I
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSII 519

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              CK+ + E A  L  +M+   +KP   I N +
Sbjct: 520 GVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 119/291 (40%), Gaps = 48/291 (16%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A  LF   + QG Q    S + ++  L  + K+  A  L+  ++   +    F   +L+
Sbjct: 20  QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSNKISSPFFTVPSLL 79

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-- 230
                    +    L               Y  +IN + K++ ++ AL  ++EM+ KG  
Sbjct: 80  HHLTQNQNPSMTTALL--------------YESIINAHLKSQLLDKALIFFNEMVDKGLV 125

Query: 231 --------------------------------IKPDVVIYNTLFIGLFEIHQVERAFKLF 258
                                           +K DV  +  +  G  E   ++++F+L 
Sbjct: 126 FRPNIFNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIKGCCENGNLDKSFQLL 185

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
             +Q  G++ +   Y T IDG CKNG I  A   F  +  +    +   +  LI+GL K 
Sbjct: 186 GLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKK 245

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G  K  ++LF  +    L  ++ TYN +++  C +GK+ +A DLF +M  +
Sbjct: 246 GLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRER 296


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 193/364 (53%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K+   GC PNV TYNTLI+G C+         L   MA    E      PN ++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE------PNLIS 277

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+GLC+EG + +   +  +M     + + VTYN+LI G+C   ++++A  +  EM+
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+V+++  +++ +CK G M+ A   L+ M   G+ PN   Y TL+DGF   G +N
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   M   G   +V +Y+ LING+C   ++E A+++  +M  KG+ PDVV Y+T+ 
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G    + V+ A ++  EM   G+  DT  Y + I G C+     EA +L+  +  +   
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y  LI+  C  G L+ A +L   +    ++ DVVTY+++I+ L    +  +A+ L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

Query: 363 FLDM 366
            L +
Sbjct: 578 LLKL 581



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 205/372 (55%), Gaps = 21/372 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   G  P+V TY +LI+ +C+ G+   A+   ++M         +C PN  
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-----RVRGLC-PNER 381

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++DG  ++G++++A  +  +M D   +P+VVTYN+LI+G C      +A  +  +M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+VVS++ +++  C++  +DEA R+   M++ G++P+   Y++L+ GFC   R 
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L+  M  +G   + F+Y+ LIN YC   ++E AL L++EM+ KG+ PDVV Y+ L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID---------------GLCKNGYI 286
             GL +  +   A +L  ++           Y T I+               G C  G +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA ++F ++    ++ D  AYN +I G C++G ++ A+ L++ + +   +   VT   +
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681

Query: 347 IHALCADGKMDK 358
           + AL  +GK+++
Sbjct: 682 VKALHKEGKVNE 693



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 161/303 (53%), Gaps = 1/303 (0%)

Query: 58  PNTVTYTTIIDGLCKEGF-VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           P  ++Y  ++D   +    +  A+ +F +M +  ++PNV TYN LI GFC+A + + A  
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF +M  +G  PNVV++N +++  CK  K+D+  +LL  M   G+ PN   YN +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+     +   M   G   +  +Y+ LI GYCK      AL +++EML  G+ P V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y +L   + +   + RA +  D+M+  G+  +   Y T +DG  + GY+ EA  + R +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               +   +  YN LI+G C +G+++ A  +   +    L  DVV+Y+ ++   C    +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466

Query: 357 DKA 359
           D+A
Sbjct: 467 DEA 469



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 1/316 (0%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNE 113
           +C   +  +  ++    +   +DKA  +    +     P V++YN+++     +  + + 
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A+ +F EM++  V PNV ++N+++   C  G +D A  L + M   G  PN   YNTL+D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C   +++   +L  SM   G + N+ SY+++ING C+   ++    + +EM  +G   
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           D V YNTL  G  +     +A  +  EM RHG+      Y + I  +CK G +  A+E  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +R+     + R Y  L+DG  + G +  A+ + R +        VVTYN +I+  C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 354 GKMDKARDLFLDMEAK 369
           GKM+ A  +  DM+ K
Sbjct: 429 GKMEDAIAVLEDMKEK 444


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 188/350 (53%), Gaps = 12/350 (3%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYTTIIDG 69
             C PN+ T+NTLI+ LCR G       LFE   E+     E G  C P+   Y TIIDG
Sbjct: 256 MACPPNIVTFNTLISYLCRNG-------LFERVHEVLAQMAEHG--CTPDIRMYATIIDG 306

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           +CKEG +  A E+  +M    + PNVV YN+L+ G C A  W E + L  EM D+    +
Sbjct: 307 ICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            V+FN++++  C+NG +D    LLE M+  G  P+   Y T+++GFC  G ++ A  L  
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           SM + GCK N  SY+I++ G C  +    A  L S+M+ +G   + + +NTL   L +  
Sbjct: 427 SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG 486

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            VE+A +L  +M  +G + D  +Y T IDGL K G   EA+EL   +       +   Y+
Sbjct: 487 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +   L + GR+    ++F ++    + +D V YN +I +LC  G+ ++A
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERA 596



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 182/366 (49%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   L  FGCEP+V +YN ++ GLC          L EEM        + C PN V
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVR------MACPPNIV 263

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I  LC+ G  ++  E+  +M +    P++  Y ++I G C       A  +   M
Sbjct: 264 TFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRM 323

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++PNVV +N ++  LC   + +E   LL  M       +   +N L+D FC  G V
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +R  EL   M   GC  +V +Y+ +ING+CK   I+ A+ L   M + G KP+ + Y  +
Sbjct: 384 DRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +   A  L  +M + G   +   + T I+ LCK G + +A+EL + + +   
Sbjct: 444 LKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGC 503

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y+ +IDGL K+G+   A EL   +    +  + + Y+ +  AL  +G+++K   
Sbjct: 504 SPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQ 563

Query: 362 LFLDME 367
           +F +++
Sbjct: 564 MFDNIQ 569



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 180/366 (49%), Gaps = 8/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A A+  ++   GC P    Y+ ++   CR G    A+ + E++ A G       C  + 
Sbjct: 140 DALAVLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARG-------CALDV 192

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
                +++ +C +G VDKA  L   +      P+VV+YN+++ G C A  W   + L  E
Sbjct: 193 GNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEE 252

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+     PN+V+FN +++ LC+NG  +    +L  M + G  P+  +Y T++DG C  G 
Sbjct: 253 MVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGH 312

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A E+   M S G K NV  Y+ L+ G C  +  E    L +EM  K    D V +N 
Sbjct: 313 LKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNI 372

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +   V+R  +L ++M  HG   D   Y T I+G CK G I EAV L +++    
Sbjct: 373 LVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACG 432

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +  +Y  ++ GLC + R   A +L   + +     + +T+N +I+ LC  G +++A 
Sbjct: 433 CKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAI 492

Query: 361 DLFLDM 366
           +L   M
Sbjct: 493 ELLKQM 498



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 29/323 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF---------- 52
           A  +  ++  +G +PNV  YNTL+ GLC          L  EM + +             
Sbjct: 316 AHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVD 375

Query: 53  -----GVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                G+V              C P+ +TYTT+I+G CKEG +D+A  L   M      P
Sbjct: 376 FFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKP 435

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N ++Y  ++ G C A  W +A+ L  +M+ QG   N ++FN ++N LCK G +++A  LL
Sbjct: 436 NTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELL 495

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M+  G  P+   Y+T++DG    G+ + A EL   M + G   N   YS + +   + 
Sbjct: 496 KQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSRE 555

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             I   + ++  +    I+ D V+YN +   L +  + ERA +    M   G   +   Y
Sbjct: 556 GRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTY 615

Query: 274 RTFIDGLCKNGYIVEAVELFRTL 296
              I GL   G++ EA E+   L
Sbjct: 616 TILIRGLASEGFVKEAQEMLTEL 638



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 155/347 (44%), Gaps = 9/347 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           YN ++ G CR G    A  L            V   PN  TY  ++  LC  G +  A  
Sbjct: 93  YNAMVAGYCRAGQLESARRLAA---------AVPVPPNAYTYFPVVRALCARGRIADALA 143

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +  +M      P    Y+ ++   C    +  A  +  ++  +G   +V + N+++N +C
Sbjct: 144 VLDEMPRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAIC 203

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
             G +D+A  LL  +   G  P+   YN ++ G C+  R    +EL   M  M C  N+ 
Sbjct: 204 DQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIV 263

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +++ LI+  C+N   E    + ++M   G  PD+ +Y T+  G+ +   ++ A ++ + M
Sbjct: 264 TFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRM 323

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
             +G+  +   Y T + GLC      E  EL   +      LD   +N L+D  C++G +
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLV 383

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
               EL   +     + DV+TY  +I+  C +G +D+A  L   M A
Sbjct: 384 DRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTA 430



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 82/261 (31%), Positives = 140/261 (53%), Gaps = 8/261 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++ V GC P+V TY T+ING C+ G    A+ L + M          CKPNT++YT 
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMT------ACGCKPNTISYTI 442

Query: 66  IIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++ GLC  E +VD A++L  +M  +    N +T+N+LI+  C      +A  L  +M+  
Sbjct: 443 VLKGLCSAERWVD-AEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVN 501

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+++S++ +++ L K GK DEA  LL +M+  G+ PN  +Y+++       GR+N+ 
Sbjct: 502 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKV 561

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ++F +++    + +   Y+ +I+  CK  E E A+   + M+S G  P+   Y  L  G
Sbjct: 562 IQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRG 621

Query: 245 LFEIHQVERAFKLFDEMQRHG 265
           L     V+ A ++  E+   G
Sbjct: 622 LASEGFVKEAQEMLTELCSKG 642



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 152/344 (44%), Gaps = 12/344 (3%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           ++LI  LC  G T  A         G            V Y  ++ G C+ G ++ A+ L
Sbjct: 62  SSLIRSLCAAGRTAEAARALSAAGGGA---------GVVAYNAMVAGYCRAGQLESARRL 112

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
              +    + PN  TY  ++   C      +A  +  EM  +G  P    ++VI+   C+
Sbjct: 113 AAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVILEAACR 169

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
            G    A R+LE +   G   +    N +++  C  G V++A  L   + S GC+ +V S
Sbjct: 170 GGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVS 229

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ ++ G C  K       L  EM+     P++V +NTL   L      ER  ++  +M 
Sbjct: 230 YNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMA 289

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
            HG   D   Y T IDG+CK G++  A E+   +     + ++  YN L+ GLC + R +
Sbjct: 290 EHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWE 349

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              EL   +       D VT+NI++   C +G +D+  +L   M
Sbjct: 350 ETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQM 393



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 107/209 (51%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC  N  T+NTLIN LC+ G    A+ L ++M  NG       C P+
Sbjct: 454 VDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG-------CSPD 506

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  D+A EL   M ++ ++PN + Y+S+          N+   +F 
Sbjct: 507 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFD 566

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK G+ + A   L  M+  G  PN   Y  L+ G    G
Sbjct: 567 NIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEG 626

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 627 FVKEAQEMLTELCSKGALRKHLMKHFGIV 655


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/349 (34%), Positives = 189/349 (54%), Gaps = 8/349 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  +YNT+INGLC+    + A  LF+EM  G       CKPN+VT++ +IDG CK G V
Sbjct: 162 PDCVSYNTVINGLCKGKRLVEAKELFKEMKGGE------CKPNSVTFSALIDGFCKNGDV 215

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++   L  +M+   +  +V  Y++LI GFC   D    K LF EM+ + V PNVV+++ +
Sbjct: 216 EEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCL 275

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           MN LCK  K  EA+++L+ M    VRP+   Y  L DG    GR + A ++   M   G 
Sbjct: 276 MNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGE 335

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + N  +Y+ +ING CK   ++ AL +   M  KG KPDVV Y+TL  GL  + +++ A  
Sbjct: 336 EPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVD 395

Query: 257 LFDEM--QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           L + +  +   +  D +A+   I  LCK   +  A  ++ T+    +  +I  YN LIDG
Sbjct: 396 LLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDG 455

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              +G+L  A EL++      +  +  TY ++I+ LC    +  A+ LF
Sbjct: 456 YLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF 504



 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 196/369 (53%), Gaps = 8/369 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF +++   C+PN  T++ LI+G C+ G       L EEM     E  V      
Sbjct: 181 VEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDV------ 234

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y+ +I G C +G +++ KELF +M  +N+ PNVVTY+ L++  C    W EA  +   
Sbjct: 235 FVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDT 294

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    V+P+VV++ V+ + L KNG+  +A ++L+LM++ G  PN   YN +++G C  GR
Sbjct: 295 MTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGR 354

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPDVVIY 238
           V+ A  +  +M   G K +V +YS L+ G C   +I+ A+ L + ++SK   IKPDV  +
Sbjct: 355 VDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAF 414

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N +   L +  ++  A +++  M   G  ++   Y   IDG    G + +A+EL++    
Sbjct: 415 NLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVD 474

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                +   Y  LI+GLCK   L IA  LF           V  YN ++ +LC +  +++
Sbjct: 475 SGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQ 534

Query: 359 ARDLFLDME 367
           AR+LF +M 
Sbjct: 535 ARNLFQEMR 543



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 187/381 (49%), Gaps = 31/381 (8%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGN-------------------------GE 51
           P+  + NTLI+ L +  H    +++  +MA+ +                         G 
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 52  FGVVCKP----NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
            G++ K     N   +  ++ G C+ G   KA +LF  MK   + P+ V+YN++I+G C 
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
                EAK LF EM     +PN V+F+ +++  CKNG ++E   LLE M ++G+  + FV
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y+ L+ GFC  G + R +ELF  M       NV +YS L+N  CK ++ + A  +   M 
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMT 296

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
              ++PDVV Y  L  GL +  +   A K+ D M + G   +   Y   I+GLCK G + 
Sbjct: 297 GCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVD 356

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV--LIADVVTYNI 345
           +A+ +  T+     + D+  Y+ L+ GLC  G++  A +L   L      +  DV  +N+
Sbjct: 357 DALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNL 416

Query: 346 MIHALCADGKMDKARDLFLDM 366
           +I  LC   ++  A+ ++  M
Sbjct: 417 VIQELCKQRRLRHAKRVYYTM 437



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 180/370 (48%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA +   +      P+V  Y  L +GL + G    A+ + + M     E      PN V
Sbjct: 287 EAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEE------PNNV 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  II+GLCKEG VD A  +   M  +   P+VVTY++L+ G C     +EA  L   +
Sbjct: 341 TYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLL 400

Query: 122 MDQ--GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M +   ++P+V +FN+++ ELCK  ++  A R+   M++ G   N   YN L+DG+   G
Sbjct: 401 MSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAG 460

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ +A EL+      G   N  +Y++LING CK + +  A  L+++  + G +P V  YN
Sbjct: 461 KLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYN 520

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL   L     VE+A  LF EM+      D  ++   IDG  K G +  A EL   +  +
Sbjct: 521 TLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNM 580

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   ++ LI+   K G+L  A  L+  +     + D V ++ ++      GK +K 
Sbjct: 581 NLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKV 640

Query: 360 RDLFLDMEAK 369
             +   M  K
Sbjct: 641 VSMLQQMADK 650



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 167/340 (49%), Gaps = 8/340 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPN  TYN +INGLC+ G    AL + E MA          KP+ VTY+T++ GLC  
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGK------KPDVVTYSTLVKGLCGV 387

Query: 74  GFVDKAKELF--LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           G +D+A +L   L  K+ +I P+V  +N +I   C       AK ++  M+++G   N+V
Sbjct: 388 GKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIV 447

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++N++++     GK+ +A  L +  +  G+ PNA  Y  L++G C    ++ A+ LF   
Sbjct: 448 TYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKK 507

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            + G +  V  Y+ L+   C+   +E A +L+ EM +    PDVV +N +  G  +   V
Sbjct: 508 RASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDV 567

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A +L  EM    +  D   +   I+   K G + EA  L+  +    +  D   ++ L
Sbjct: 568 ESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSL 627

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           + G    G+ +    + + +    ++ D    + ++  LC
Sbjct: 628 LKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLC 667



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 122/251 (48%), Gaps = 6/251 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   N+ TYN LI+G    G    AL L+++  +          PN  TYT +I+GLCK 
Sbjct: 441 GFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSG------ISPNAATYTVLINGLCKM 494

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +  AK LF K +     P V  YN+L+   C  +   +A+ LF EM +    P+VVSF
Sbjct: 495 QMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSF 554

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+I++   K G ++ A  LL  M+ + + P+   ++ L++ F   G+++ A  L+  M S
Sbjct: 555 NIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVS 614

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +   +  L+ GY    + E  +S+  +M  K +  D  + +T+   L  + +   
Sbjct: 615 CGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVD 674

Query: 254 AFKLFDEMQRH 264
             K+  +  +H
Sbjct: 675 IEKILPKFSQH 685



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 100/207 (48%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+    NTL+D        +    +   M S+       S S LI  +   ++   A  +
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGV 116

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
              ++ +G   +V  +N L  G  +     +A  LF  M+R+ +  D  +Y T I+GLCK
Sbjct: 117 LGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCK 176

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
              +VEA ELF+ ++  + + +   ++ LIDG CK+G ++  + L   + +  L  DV  
Sbjct: 177 GKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFV 236

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           Y+ +I   C+ G +++ ++LF +M  K
Sbjct: 237 YSALISGFCSKGDIERGKELFNEMLRK 263



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 91/174 (52%), Gaps = 6/174 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K R  G  P V  YNTL+  LCR      A NLF+EM N N +      P+ V+
Sbjct: 500 AKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHD------PDVVS 553

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  IIDG  K G V+ AKEL L+M + N+ P+ +T++ LI+ F      +EA  L+  M+
Sbjct: 554 FNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMV 613

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
             G  P+ V F+ ++      GK ++   +L+ M    V  ++ + +T++   C
Sbjct: 614 SCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLC 667



 Score = 45.4 bits (106), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++R    +P+V ++N +I+G  + G    A  L  EM N      +   P+ +
Sbjct: 534 QARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLN------MNLVPDNI 587

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +I+   K G +D+A  L+ +M      P+ V ++SL+ G+       +   +  +M
Sbjct: 588 TFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
            D+ V  +    + I+  LC   K  +  ++L    Q
Sbjct: 648 ADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQ 684


>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 562

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 115/328 (35%), Positives = 181/328 (55%), Gaps = 16/328 (4%)

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           G + +PN V Y TIID +CK+   + A +L+ +M  + I P+V TYN+LI+GFC      
Sbjct: 234 GKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLK 293

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A  LF +M  + + P+V +FN++++  CK G++ EA   L +M++ G++P+   YN+LM
Sbjct: 294 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLM 353

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D +CL   VN+A+ +F +M   G   NV SYSI+IN +CK K ++ A+ L+ EM  K I 
Sbjct: 354 DRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIF 413

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT----------------WAYRTF 276
           P+V+ Y++L  GL +  ++  A +L DEM   G   D                 + Y   
Sbjct: 414 PNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTIL 473

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           IDGLCK G + +A  +F  L +  Y + +  Y  +I G C  G    A  L   +     
Sbjct: 474 IDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCC 533

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFL 364
           I + VTY I+I +L  + + DKA + F+
Sbjct: 534 IPNAVTYEIIIRSLFDNDENDKAENFFV 561



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 152/303 (50%), Gaps = 16/303 (5%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L  ++  + + PN+V YN++I   C     N+A  L+ EM+ + + P+V ++N ++N  
Sbjct: 227 QLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGF 286

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C  GK+ +A  L   M    + P+ + +N L+D FC  GRV  A+     M   G K +V
Sbjct: 287 CIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDV 346

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ L++ YC   E+  A S+++ M  +G+  +V  Y+ +     +I  V++A KLF E
Sbjct: 347 VTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKE 406

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVE----------------LFRTLRILKYELD 304
           M    +  +   Y + IDGLCK+G I  A+E                L R L+      +
Sbjct: 407 MHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPN 466

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  LIDGLCK GRL+ A  +F  L        V TY +MIH  C  G  D+A  L  
Sbjct: 467 MFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLS 526

Query: 365 DME 367
            M+
Sbjct: 527 KMK 529



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 150/299 (50%), Gaps = 25/299 (8%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R+F   P+V TYN LING C  G    A+ LF +M + N        P+  T+  ++D  
Sbjct: 271 RIF---PDVNTYNALINGFCIVGKLKDAIGLFNKMTSEN------INPDVYTFNILVDAF 321

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           CKEG V +AK     M  + I P+VVTYNSL+  +C  N+ N+AK +F  M  +GV  NV
Sbjct: 322 CKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANV 381

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            S+++++N  CK   +D+A +L + M    + PN   Y++L+DG C +GR++ A EL   
Sbjct: 382 RSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLIDGLCKSGRISYALELNDE 441

Query: 191 M----------------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           M                +  G + N+F+Y+ILI+G CK   +E A +++ ++L KG    
Sbjct: 442 MHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNIT 501

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           V  Y  +  G       + A  L  +M+ +    +   Y   I  L  N    +A   F
Sbjct: 502 VNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 145/260 (55%), Gaps = 16/260 (6%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +QPN+V +N I++ +CK+   ++A  L   M+   + P+   YN L++GFC+ G++  A 
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF  M S     +V++++IL++ +CK   ++ A +  + M+ +GIKPDVV YN+L    
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             +++V +A  +F+ M   GV A+  +Y   I+  CK   + +A++LF+ +   +   ++
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416

Query: 306 RAYNCLIDGLCKSGRLKIAWEL----------------FRSLPRGVLIADVVTYNIMIHA 349
             Y+ LIDGLCKSGR+  A EL                 R L    +  ++ TY I+I  
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDG 476

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC  G+++ AR++F D+  K
Sbjct: 477 LCKGGRLEDARNIFEDLLVK 496



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 138/274 (50%), Gaps = 24/274 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNT 60
           +A  LF K+      P+V+T+N L++  C+ G    A N L   M  G        KP+ 
Sbjct: 294 DAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG-------IKPDV 346

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY +++D  C    V+KAK +F  M    +  NV +Y+ +I+ FC     ++A  LF E
Sbjct: 347 VTYNSLMDRYCLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKE 406

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRL-------------LELMIQI---GVRPN 164
           M  + + PNV++++ +++ LCK+G++  A  L             + L  Q+   G+RPN
Sbjct: 407 MHHKQIFPNVITYSSLIDGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPN 466

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            F Y  L+DG C  GR+  A  +F  +   G    V +Y+++I+G+C     + A++L S
Sbjct: 467 MFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLS 526

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +M      P+ V Y  +   LF+  + ++A   F
Sbjct: 527 KMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFF 560



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 74/152 (48%)

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             L L   +  K ++P++V+YNT+   + +      AF L+ EM    +  D   Y   I
Sbjct: 224 APLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALI 283

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +G C  G + +A+ LF  +       D+  +N L+D  CK GR+K A      + +  + 
Sbjct: 284 NGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 343

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            DVVTYN ++   C   +++KA+ +F  M  +
Sbjct: 344 PDVVTYNSLMDRYCLVNEVNKAKSIFNTMSHR 375



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 29/110 (26%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE---------------MANGN 49
            L  +L+  G  PN+FTY  LI+GLC+ G    A N+FE+               M +G 
Sbjct: 453 TLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLLVKGYNITVNTYTVMIHGF 512

Query: 50  GEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLK 85
              G+               C PN VTY  II  L      DKA+  F+K
Sbjct: 513 CNKGLFDEAMTLLSKMKDNCCIPNAVTYEIIIRSLFDNDENDKAENFFVK 562


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 197/365 (53%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++   +R  GC PNV TYNTL+    R G    A  L   M  G        KPN V
Sbjct: 208 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG------LKPNLV 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++++G+CK G ++ A+++F +M  E + P+ V+YN+L+ G+C A   +EA  +F EM
Sbjct: 262 TFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VV+F  +++ +CK G ++ A  L+  M + G++ N   +  L+DGFC  G +
Sbjct: 322 TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M+    K +V  Y+ LINGYC    ++ A  L  EM +KG+KPDVV Y+T+
Sbjct: 382 DDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +      AF+L  +M   GV  D   Y + I  LC    + +A  LF+ +  L  
Sbjct: 442 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGL 501

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   Y  LIDG CK G ++ A  L   + +  ++ DVVTY+++I+ L    +  +A+ 
Sbjct: 502 QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561

Query: 362 LFLDM 366
           L   +
Sbjct: 562 LLFKL 566



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 163/312 (52%), Gaps = 1/312 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ + Y  ++  L  +  +  A+  F  M  + + PNV TYN L+   C      EA  +
Sbjct: 154 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSI 212

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M   G  PNVV++N ++    + G++D A RL+ +M + G++PN   +N++++G C 
Sbjct: 213 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCK 272

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++  A ++F  M   G   +  SY+ L+ GYCK      ALS+++EM  KGI PDVV 
Sbjct: 273 AGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 332

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           + +L   + +   +ERA  L  +M+  G+  +   +   IDG CK G++ +A+   R ++
Sbjct: 333 FTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMK 392

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             + +  +  YN LI+G C  GR+  A EL   +    L  DVVTY+ +I A C +    
Sbjct: 393 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 452

Query: 358 KARDLFLDMEAK 369
            A +L   M  K
Sbjct: 453 SAFELNQQMLEK 464



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 179/353 (50%), Gaps = 7/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V  YN ++  L     T  A   F+ M +     GV   PN  TY  ++  LC  
Sbjct: 151 GYVPSVLAYNAVLLALSDASLT-SARRFFDSMLSD----GVA--PNVYTYNILVRALCGR 203

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  +   M+     PNVVTYN+L+  F  A + + A+ L   M + G++PN+V+F
Sbjct: 204 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTF 263

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N +CK GKM++A ++ + M++ G+ P+   YNTL+ G+C  G  + A  +F  M  
Sbjct: 264 NSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 323

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V +++ LI+  CK   +E A++L  +M  +G++ + V +  L  G  +   ++ 
Sbjct: 324 KGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 383

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A      M++  +      Y   I+G C  G + EA EL   +     + D+  Y+ +I 
Sbjct: 384 ALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 443

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             CK+     A+EL + +    ++ D +TY+ +I  LC + ++  A  LF +M
Sbjct: 444 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNM 496



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/388 (27%), Positives = 184/388 (47%), Gaps = 61/388 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F ++   G  P+V T+ +LI+ +C+ G+   A+ L  +M     E G+  + N V
Sbjct: 313 EALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMR----ERGL--QMNEV 366

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDG CK+GF+D A      MK   I P+VV YN+LI+G+C     +EA+ L  EM
Sbjct: 367 TFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426

Query: 122 MDQGVQPNVVSFNVIMNELCKN-----------------------------------GKM 146
             +G++P+VV+++ I++  CKN                                    ++
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +A  L + MI++G++P+ F Y +L+DG C  G V  A  L   M   G   +V +YS+L
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL 546

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING  K+     A     ++L K    D +  NT +  L  +H   +             
Sbjct: 547 INGLSKSARAMEA----QQLLFKLYHEDPIPANTKYDAL--MHCCRK------------- 587

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
            A+  +    + G C  G + EA ++++++    + LD   Y+ LI G C++G +  A  
Sbjct: 588 -AELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALS 646

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADG 354
             + + +G    +  +   +I  L  +G
Sbjct: 647 FHKQMLQGGFAPNSTSTISLIRGLFENG 674



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/292 (30%), Positives = 145/292 (49%), Gaps = 21/292 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +P+V TY+T+I+  C+   T  A  L ++M     E GV+  P+ +
Sbjct: 418 EARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML----EKGVL--PDAI 471

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I  LC E  +  A  LF  M    + P+  TY SLI G C   +   A  L  +M
Sbjct: 472 TYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKM 531

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM--------- 172
           +  GV P+VV+++V++N L K+ +  EA +LL  +      P    Y+ LM         
Sbjct: 532 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELK 591

Query: 173 ------DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                  GFC+ G +N A++++ SM       +   YS+LI+G+C+   +  ALS + +M
Sbjct: 592 SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQM 651

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           L  G  P+     +L  GLFE   V  A ++  ++  +   AD  A +  ID
Sbjct: 652 LQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALID 703


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/361 (34%), Positives = 196/361 (54%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L ++L  FG  PNV  Y TLI+G C+ G    A +LF EM    G+ G+V   N  TYT 
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKLGLVA--NERTYTV 238

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+GL K G   +  E++ KM+++ + PN+ TYN +++  C      +A  +F EM ++G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V  N+V++N ++  LC+  K++EA+++++ M   G+ PN   YNTL+DGFC  G++ +A 
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   ++S G   ++ +Y+IL++G+C+  +  GA  +  EM  +GIKP  V Y  L    
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                +E+A +L   M+  G+  D   Y   I G C  G + EA  LF+++     E + 
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I G CK G    A +L + +    L  +V +Y  MI  LC + K  +A  L   
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538

Query: 366 M 366
           M
Sbjct: 539 M 539



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 186/352 (52%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V+++  LI G C  G    + +L  E+     EFG    PN V YTT+IDG CK+G ++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELT----EFGF--SPNVVIYTTLIDGCCKKGEIE 215

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KAK+LF +M    +  N  TY  LI+G        +   ++ +M + GV PN+ ++N +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N+LCK+G+  +A ++ + M + GV  N   YNTL+ G C   ++N A ++   M+S G  
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ LI+G+C   ++  ALSL  ++ S+G+ P +V YN L  G         A K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+  G+      Y   ID   ++  + +A++L  ++  L    D+  Y+ LI G C 
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G++  A  LF+S+       + V YN MI   C +G   +A  L  +ME K
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 146/269 (54%), Gaps = 6/269 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G   N+ TYNTLI GLCR      A  + ++M +          PN +
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG------INPNLI 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG C  G + KA  L   +K   ++P++VTYN L+ GFC   D + A  +  EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+ V++ ++++   ++  M++A +L   M ++G+ P+   Y+ L+ GFC+ G++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  LF SM    C+ N   Y+ +I GYCK      AL L  EM  K + P+V  Y  +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
              L +  + + A +L ++M   G+   T
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPST 548



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 34/338 (10%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G     F   +  L    + E        Y  +I+ +  +   N +   F EM+D G
Sbjct: 65  VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124

Query: 126 VQP----------------------------------NVVSFNVIMNELCKNGKMDEASR 151
             P                                  +V SF +++   C+ G+++++  
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           LL  + + G  PN  +Y TL+DG C  G + +A++LF  M  +G   N  +Y++LING  
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN   +    +Y +M   G+ P++  YN +   L +  + + AF++FDEM+  GV+ +  
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y T I GLC+   + EA ++   ++      ++  YN LIDG C  G+L  A  L R L
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               L   +VTYNI++   C  G    A  +  +ME +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 128/236 (54%), Gaps = 6/236 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  +++  G  PN+ TYNTLI+G C  G    AL+L  ++ +          P+ V
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG------LSPSLV 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G C++G    A ++  +M++  I P+ VTY  LI  F  +++  +A  L + M
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+V +++V+++  C  G+M+EASRL + M++    PN  +YNT++ G+C  G  
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            RA +L   ME      NV SY  +I   CK ++ + A  L  +M+  GI P   I
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 118/346 (34%), Positives = 186/346 (53%), Gaps = 6/346 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNV T+NTLI  LCR G       +  +M +        C P+   Y T++DG+CKE
Sbjct: 255 GCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG------CTPDIRMYATVLDGVCKE 308

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++ A E+  +M    + PNVV YN+++ G C A  W +A+ L  EM D     + V+F
Sbjct: 309 GHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTF 368

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++  C+NG +     LLE M++ G  P+   Y T+++GFC  G ++ A  L  SM +
Sbjct: 369 NILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAA 428

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ N  SY+I++ G C  +    A  L S+M+ +G  P+ V +NT+   L +   VE+
Sbjct: 429 CGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQ 488

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L  +M  +G + D  +Y T IDGL K G   EA+EL   +       +   Y+ +  
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIAS 548

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            L K GR+    ++F ++    + +D V YN +I +LC  G  D+A
Sbjct: 549 ALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRA 594



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 179/355 (50%), Gaps = 6/355 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FGC+P+V +YN ++ GLC         +L EEM        V C PN VT+ T+I  LC+
Sbjct: 219 FGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVR------VGCPPNVVTFNTLIGYLCR 272

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G  ++  ++  +M D    P++  Y +++ G C       A  +   M   G++PNVV 
Sbjct: 273 NGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVC 332

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++  LC   + ++A  LL  M       +   +N L+D FC  G V R  EL   M 
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC  +V +Y+ +ING+CK   I+ A+ L   M + G +P+ + Y  +  GL    +  
Sbjct: 393 EHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L  +M   G + +   + T I+ LCK G + +A+EL + + +     D+ +Y+ +I
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVI 512

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           DGL K+G+   A EL   +    +  + + Y+ +  AL  +G++++   +F +++
Sbjct: 513 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQ 567



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 171/390 (43%), Gaps = 46/390 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE--- 73
           PN +TY  ++  LC  G    AL++ +EM          C P    Y  I++  C     
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRG------CAPIPPMYHVILEAACSRGGG 166

Query: 74  ------------------------------------GFVDKAKELFLKMKDE-NINPNVV 96
                                               G VD+A  L   +      +P+VV
Sbjct: 167 GGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVV 226

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           +YN+++ G C A  W   + L  EM+  G  PNVV+FN ++  LC+NG  +   ++L  M
Sbjct: 227 SYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQM 286

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +  G  P+  +Y T++DG C  G +  A E+   M S G K NV  Y+ ++ G C  +  
Sbjct: 287 VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERW 346

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A  L +EM       D V +N L     +   V R  +L ++M  HG   D   Y T 
Sbjct: 347 EQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTV 406

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I+G CK G I EAV L +++       +  +Y  ++ GLC + R   A +L   +     
Sbjct: 407 INGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGC 466

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
             + VT+N +I+ LC  G +++A +L   M
Sbjct: 467 SPNPVTFNTVINFLCKKGLVEQAIELLKQM 496



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 142/282 (50%), Gaps = 6/282 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C  +  T+N L++  C+ G     + L E+M     E G  C P+ +TYTT+I+G CKEG
Sbjct: 361 CPLDDVTFNILVDFFCQNGLVYRVIELLEQML----EHG--CVPDVITYTTVINGFCKEG 414

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A  L   M      PN ++Y  ++ G C A  W +A+ L  +M++QG  PN V+FN
Sbjct: 415 LIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFN 474

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N LCK G +++A  LL+ M+  G  P+   Y+T++DG    G+ + A EL   M + 
Sbjct: 475 TVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK 534

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   N   YS + +   K   I   + ++  +    I+ D V+YN +   L +    +RA
Sbjct: 535 GMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRA 594

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +    M   G   +   Y   I GL   G++ EA E+   L
Sbjct: 595 IEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 163/352 (46%), Gaps = 14/352 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           YN +++G CR G    A  L            V   PN  TY  ++  LC  G +  A  
Sbjct: 86  YNAMVSGYCRAGQLASARRLAAS---------VPVPPNAYTYFPVVRALCARGRIADALS 136

Query: 82  LFLKMKDENINPNVVTYNSLIHGFC---YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           +  +M+     P    Y+ ++   C       +  A  +  ++  +G   +V + N+++N
Sbjct: 137 VLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLN 196

Query: 139 ELC-KNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
            +C + G +DEA RLL +L    G  P+   YN ++ G C+  R  R ++L   M  +GC
Sbjct: 197 AVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGC 256

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV +++ LI   C+N   E    + ++M+  G  PD+ +Y T+  G+ +   +E A +
Sbjct: 257 PPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHE 316

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + D M  +G+  +   Y T + GLC      +A EL   +      LD   +N L+D  C
Sbjct: 317 ILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFC 376

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           ++G +    EL   +     + DV+TY  +I+  C +G +D+A  L   M A
Sbjct: 377 QNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAA 428



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 143/261 (54%), Gaps = 8/261 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+V TY T+ING C+ G    A+ L + MA         C+PNT++YT 
Sbjct: 387 LLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMA------ACGCRPNTISYTI 440

Query: 66  IIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++ GLC  E +VD A++L  +M ++  +PN VT+N++I+  C      +A  L  +M+  
Sbjct: 441 VLKGLCSAERWVD-AEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLN 499

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+++S++ +++ L K GK DEA  LL +M+  G+ PN  +Y+++       GR+NR 
Sbjct: 500 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRV 559

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ++F +++ +  + +   Y+ +I+  CK    + A+   + M+S G  P+   Y  L  G
Sbjct: 560 IQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRG 619

Query: 245 LFEIHQVERAFKLFDEMQRHG 265
           L     V+ A ++  E+   G
Sbjct: 620 LASEGFVKEAQEMLTELCSKG 640



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 106/209 (50%), Gaps = 10/209 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPN 59
           ++A  L  ++   GC PN  T+NT+IN LC+ G    A+ L ++M  NG       C P+
Sbjct: 452 VDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNG-------CSPD 504

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  D+A EL   M ++ ++PN + Y+S+          N    +F 
Sbjct: 505 LISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFD 564

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK G  D A   L  M+  G  PN   Y  L+ G    G
Sbjct: 565 NIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEG 624

Query: 180 RVNRAEELFVSMESMGC--KHNVFSYSIL 206
            V  A+E+   + S G   KH +  + I+
Sbjct: 625 FVKEAQEMLTELCSKGALRKHFMKHFGIV 653



 Score = 38.1 bits (87), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 3/62 (4%)

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN ++ G C++G+L  A  L  S+P   +  +  TY  ++ ALCA G++  A  +  +M 
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 368 AK 369
            +
Sbjct: 143 RR 144


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 191/353 (54%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYNT +NGLC+  H   AL + + M     +      P+  TY  +++ LCK 
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD------PDVFTYNIVVNCLCKN 334

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++AK +  +M D    P++ T+N+LI   C  N   EA  L  ++  +GV P+V +F
Sbjct: 335 GQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTF 394

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK G    A RL E M   G  P+   YNTL+D  C  G++ +A +L   MES
Sbjct: 395 NILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMES 454

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+G CK   IE A  ++ +M  +GI  + + +NTL  GL +  +++ 
Sbjct: 455 TGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDD 514

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF L ++M   G+  +   Y + +   CK G I +A ++  T+    +E+D+  Y  LI+
Sbjct: 515 AFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLIN 574

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+GR ++A ++ R +    +      YN ++ +L     +  A  LF +M
Sbjct: 575 GLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREM 627



 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 194/357 (54%), Gaps = 7/357 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+VFTYN ++N LC+ G    A  +  +M +        C P+  T+ T+I  LC  
Sbjct: 316 GHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRG------CLPDITTFNTLIAALCTG 369

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A +L  ++  + ++P+V T+N LI+  C   D + A  LF EM + G  P+ V++
Sbjct: 370 NRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTY 429

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LC  GK+ +A  LL+ M   G   +   YNT++DG C   R+  AEE+F  M+ 
Sbjct: 430 NTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDL 489

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +++ LI+G CK+K+I+ A  L ++M+S+G++P+ + YN++     +   +++
Sbjct: 490 QGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKK 549

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + + M  +G   D   Y T I+GLCK G    A+++ R +RI       +AYN ++ 
Sbjct: 550 AADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQ 609

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
            L +   ++ A  LFR +       D +TY I+   LC   G + +A D  L+M  K
Sbjct: 610 SLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 189/355 (53%), Gaps = 6/355 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +++ ++   G +P+V T+NTL+  LCR      A+ + EEM++     GV   P+  T+T
Sbjct: 167 SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSS----RGVA--PDETTFT 220

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++ G  +EG ++ A  +  +M +   +   VT N LI+G+C      +A     + +  
Sbjct: 221 TLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD 280

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ +++N  +N LC+N  +  A +++++M+Q G  P+ F YN +++  C  G++  A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + +   M   GC  ++ +++ LI   C    +E AL L  ++  KG+ PDV  +N L   
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINA 400

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++     A +LF+EM+  G   D   Y T ID LC  G + +A++L + +        
Sbjct: 401 LCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRS 460

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              YN +IDGLCK  R++ A E+F  +    +  + +T+N +I  LC D K+D A
Sbjct: 461 TITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDA 515



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 169/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ V G  P+V+T+N LIN LC+ G   +AL LFEEM N        C P+ V
Sbjct: 374 EALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSG------CTPDEV 427

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID LC  G + KA +L   M+      + +TYN++I G C      EA+ +F +M
Sbjct: 428 TYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQM 487

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  N ++FN +++ LCK+ K+D+A  L+  MI  G++PN   YN+++  +C  G +
Sbjct: 488 DLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDI 547

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL +   M  KG++P    YN +
Sbjct: 548 KKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPV 607

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 608 LQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKG 667

Query: 301 YELDIRAYNCLIDGLCKSG 319
           +  +  ++  L +GL   G
Sbjct: 668 FIPEFSSFRMLAEGLLNLG 686



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 179/356 (50%), Gaps = 6/356 (1%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           +FG + +   YN L+N L       +  +++ EM    G  G+  KP+ VT+ T++  LC
Sbjct: 139 LFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEM----GARGI--KPDVVTFNTLMKALC 192

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +   V  A  +  +M    + P+  T+ +L+ GF        A  +   M++ G     V
Sbjct: 193 RAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKV 252

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + NV++N  CK G++++A   ++  I  G  P+   YNT ++G C    V  A ++   M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   +VF+Y+I++N  CKN ++E A  + ++M+ +G  PD+  +NTL   L   +++
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A  L  ++   GV+ D + +   I+ LCK G    A+ LF  ++      D   YN L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ID LC  G+L  A +L + +         +TYN +I  LC   ++++A ++F  M+
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMD 488



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 146/307 (47%), Gaps = 2/307 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P    Y  II  L   G +D  K L  +M+ E     +   +S +  +     +++A  L
Sbjct: 72  PGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDL 131

Query: 118 FIEMMDQ--GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +  +    G+Q + V +N ++N L +  KM     +   M   G++P+   +NTLM   
Sbjct: 132 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 191

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   +V  A  +   M S G   +  +++ L+ G+ +   IE AL + + ML  G     
Sbjct: 192 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 251

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V  N L  G  ++ +VE A     +    G   D   Y TF++GLC+N ++  A+++   
Sbjct: 252 VTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDV 311

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +    ++ D+  YN +++ LCK+G+L+ A  +   +     + D+ T+N +I ALC   +
Sbjct: 312 MVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR 371

Query: 356 MDKARDL 362
           +++A DL
Sbjct: 372 LEEALDL 378



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 72/158 (45%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   G E +V TY TLINGLC+ G T VAL +   M           +P   
Sbjct: 549 KAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG------MRPTPK 602

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  ++  L +   +  A  LF +M +    P+ +TY  +  G C       EA    +E
Sbjct: 603 AYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLE 662

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+D+G  P   SF ++   L   G  D   R +E++++
Sbjct: 663 MVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIME 700


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 198/365 (54%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++   +R  GC PNV TYNTL+    R G    A  L   M +G        KPN V
Sbjct: 168 EALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG------LKPNLV 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++++G+CK G ++ A+++F +M  E + P+ V+YN+L+ G+C A   +EA  +F EM
Sbjct: 222 TFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 281

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VV+F  +++ +CK G ++ A  L+  M + G++ N   +  L+DGFC  G +
Sbjct: 282 TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 341

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M     K +V  Y+ LINGYC    ++ A  L  EM +KG+KPDVV Y+T+
Sbjct: 342 DDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +      AF+L  +M   GV  D   Y + I  LC+   + +A  LF+ +  L  
Sbjct: 402 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGL 461

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   Y  LIDG CK G ++ A  L   + +  ++ DVVTY+++I+ L    +  +A+ 
Sbjct: 462 QPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 521

Query: 362 LFLDM 366
           L   +
Sbjct: 522 LLFKL 526



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 162/312 (51%), Gaps = 1/312 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ + Y  ++  L  +  +  A+  F  M  + + PNV TYN LI   C      EA  +
Sbjct: 114 PSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSI 172

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M   G  PNVV++N ++    + G++D A RL+ +M+  G++PN   +N++++G C 
Sbjct: 173 LRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCK 232

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++  A ++F  M   G   +  SY+ L+ GYCK      ALS+++EM  KGI PDVV 
Sbjct: 233 AGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVT 292

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           + +L   + +   +E A  L  +M+  G+  +   +   IDG CK G++ +A+   R +R
Sbjct: 293 FTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMR 352

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             + +  +  YN LI+G C  GR+  A EL   +    L  DVVTY+ +I A C +    
Sbjct: 353 QCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTH 412

Query: 358 KARDLFLDMEAK 369
            A +L   M  K
Sbjct: 413 SAFELNQQMLEK 424



 Score =  173 bits (439), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 183/388 (47%), Gaps = 42/388 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V  YN ++  L     T  A   F+ M +     GV   PN  TY  +I  LC  
Sbjct: 111 GYVPSVLAYNAVLLALSDASLT-SARRFFDSMLSD----GVA--PNVYTYNILIRALCGR 163

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  +   M+     PNVVTYN+L+  F  A + + A+ L   M+D G++PN+V+F
Sbjct: 164 GHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTF 223

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N +CK GKM++A ++ + M++ G+ P+   YNTL+ G+C  G  + A  +F  M  
Sbjct: 224 NSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQ 283

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------------------- 230
            G   +V +++ LI+  CK   +E A++L  +M  +G                       
Sbjct: 284 KGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDD 343

Query: 231 ------------IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
                       IKP VV YN L  G   + +++ A +L  EM+  G+  D   Y T I 
Sbjct: 344 ALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIIS 403

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
             CKN     A EL + +       D   Y+ LI  LC+  RL  A  LF+++ +  L  
Sbjct: 404 AYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQP 463

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           D  TY  +I   C +G +++A  L   M
Sbjct: 464 DEFTYTSLIDGHCKEGNVERALSLHDKM 491



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 177/397 (44%), Gaps = 91/397 (22%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F ++   G  P+V T+ +LI+ +C+ G+   A+ L  +M     E G+  + N V
Sbjct: 273 EALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMR----ERGL--QMNEV 326

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +IDG CK+GF+D A      M+   I P+VV YN+LI+G+C     +EA+ L  EM
Sbjct: 327 TFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 386

Query: 122 MDQGVQPNVVSFNVIMNELCKN-----------------------------------GKM 146
             +G++P+VV+++ I++  CKN                                    ++
Sbjct: 387 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRL 446

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +A  L + MI++G++P+ F Y +L+DG C  G V RA  L   M   G   +V +YS+L
Sbjct: 447 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVL 506

Query: 207 INGY----------------------------------CKNKEIEGALSL---------- 222
           ING                                   C+  E++  L+L          
Sbjct: 507 INGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLM 566

Query: 223 ------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                 Y  ML +    D  +Y+ L  G      V +A     +M + G A ++ +  + 
Sbjct: 567 NEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISL 626

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           I GL +NG +VEA ++ + L       D  A   LID
Sbjct: 627 IRGLFENGMVVEADQVIQQLLNCCSLADAEASKALID 663


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 125/352 (35%), Positives = 189/352 (53%), Gaps = 7/352 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   + + G EPN+ TYN +INGLCR G       +  EM            P+ V
Sbjct: 256 EAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKG------FAPDGV 309

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++G CK G   +A  L  +M    + P+VVTY SLI+  C A + N A   F +M
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN V++  ++N   + G MDEA R+ + MI+ G  P    YN L++G C++GR+
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRM 429

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   ME  G   +V SYS +I G+C+ +E++ A  + +EM+ KG+ PD + Y++L
Sbjct: 430 EEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSL 489

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL E  ++  A  LF EM    +  D + Y + I+G CK G + EA+ L   +    +
Sbjct: 490 IQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGF 549

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             D   YN LI+GL K  R + A  L   L     I + +TY+ +I + C+D
Sbjct: 550 LPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES-CSD 600



 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/393 (30%), Positives = 200/393 (50%), Gaps = 29/393 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFG 53
           A  ++ ++   G   NVF+YN LI G C  G+  + L  FEEM            N   G
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 54  VVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
             CK                    PN +TY  +I+GLC+ G +++   +  +M  +   P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + VTYN+L++G+C   ++++A  L  EM+  G+ P+VV++  ++N +CK G ++ A    
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G+RPN   Y +L++GF   G ++ A  ++  M   G    + +Y+ L+NG+C +
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +E A+ L   M  KG+ PDVV Y+T+  G     +++RAF++  EM   GV+ D   Y
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            + I GLC+   + EA +LF+ +       D   Y  LI+G CK G L  A  L   + +
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              + D VTYN++I+ L    +  +A+ L L +
Sbjct: 547 KGFLPDTVTYNVLINGLNKQARTREAKRLLLKL 579



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 166/314 (52%), Gaps = 3/314 (0%)

Query: 58  PNTVTYTTIIDGL--CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           P  ++Y  I+D +  C++  +  A++++ +M    ++ NV +YN LI GFC A +     
Sbjct: 165 PGVLSYNAILDSIVRCRKPVI-FAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGL 223

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
             F EM      PNVV++N ++   CK  ++DEA +LL  M   G+ PN   YN +++G 
Sbjct: 224 RFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGL 283

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  GR+     +   M+  G   +  +Y+ L+NGYCK      AL L+SEML  G+ PDV
Sbjct: 284 CRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDV 343

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V Y +L   + +   + RA + FD+M   G+  +   Y + I+G  + G++ EA  ++  
Sbjct: 344 VTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDE 403

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +    +   I  YN L++G C SGR++ A  L R +    L  DVV+Y+ +I   C   +
Sbjct: 404 MIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQE 463

Query: 356 MDKARDLFLDMEAK 369
           +D+A  +  +M  K
Sbjct: 464 LDRAFQMNAEMVEK 477



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 177/362 (48%), Gaps = 27/362 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F ++ V G  PN  TY +LING  + G    A  +++EM            P  VT
Sbjct: 362 AMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSG------FPPTIVT 415

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +++G C  G +++A  L   M+ + ++P+VV+Y+++I GFC   + + A  +  EM+
Sbjct: 416 YNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMV 475

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++GV P+ ++++ ++  LC+  +++EA  L + M+   + P+ F Y +L++G+C  G +N
Sbjct: 476 EKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLN 535

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M   G   +  +Y++LING  K      A  L  ++      P+ + Y+TL 
Sbjct: 536 EALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLI 595

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +I      FK               +    I G C  G + EA ++F ++     +
Sbjct: 596 ESCSDIE-----FK---------------SVVALIKGFCMKGLMNEADQVFESMIKRNQK 635

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN +I G C+ G +  A +L++ +     I   VT   ++ AL ++G MD+  +L
Sbjct: 636 PNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEG-MDEQLNL 694

Query: 363 FL 364
            +
Sbjct: 695 VI 696



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +     +PN   YN +I+G CR G+   A  L++EM     +FG +  P+TV
Sbjct: 621 EADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMV----DFGFI--PHTV 674

Query: 62  TYTTIIDGLCKEG 74
           T   ++  L  EG
Sbjct: 675 TIIALVKALYSEG 687


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 194/366 (53%), Gaps = 11/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A AL   +   GC+P+V TY  L+  +C++     A+N+ +EM A G       C PN 
Sbjct: 159 DALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-------CTPNI 211

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  II+G+C+EG VD AKE+  ++      P++V+Y +++ G C A  W++ K LF E
Sbjct: 212 VTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAE 271

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+   PN V+F++++   C+ G ++ A ++L+ M Q G  PN  + N +++  C  GR
Sbjct: 272 MVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGR 331

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A +   +M   GC  +  SY+ ++ G C+    E A  L  EM+ K   P+ V +NT
Sbjct: 332 VDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNT 391

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               L +   +E+A KL + M  +G +     Y   + G C  G +  A+ELF     L 
Sbjct: 392 FICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN---LP 448

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E +   Y  L+ GLC + RL  A EL   + +     + VT+N+++   C  G +++A 
Sbjct: 449 CEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAM 508

Query: 361 DLFLDM 366
           +L   M
Sbjct: 509 ELVNQM 514



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 174/362 (48%), Gaps = 9/362 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +       G   +VF YNTL+ G CR G    A  L   M            P+  
Sbjct: 92  DAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---------VPPDAY 142

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT II GLC  G V  A  L   M      P+VVTY  L+   C ++ + EA  +  EM
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN+V++NVI+N +C+ G++D+A  +L  +   G +P+   Y T++ G C   R 
Sbjct: 203 RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRW 262

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  + LF  M    C  N  ++ +L+  +C+   +E A+ +  +M   G  P+  + N +
Sbjct: 263 DDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIV 322

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              + +  +V+ A+   + M  +G   DT +Y T + GLC+ G    A EL   +     
Sbjct: 323 INAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNC 382

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   +N  I  LC+ G ++ A +L   +P       +VTYN ++H  C  G++D A +
Sbjct: 383 PPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALE 442

Query: 362 LF 363
           LF
Sbjct: 443 LF 444



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 183/368 (49%), Gaps = 9/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +  ++   GC PN    N +IN +C+ G    A +    M    G +G  C P+T+
Sbjct: 299 RAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM----GMYG--CNPDTI 352

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YTT++ GLC+ G  + AKEL  +M  +N  PN VT+N+ I   C      +A  L   M
Sbjct: 353 SYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 412

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G    +V++N +++  C  G++D A   LEL   +   PN   Y TL+ G C   R+
Sbjct: 413 PEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYTTLLTGLCHAERL 469

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M    C  N  ++++L++ +C+   +E A+ L ++M+  G  P+++ +NTL
Sbjct: 470 DAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTL 529

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +    E A +L   +   GV+ DT  Y + +D L +     EA+++   ++ +  
Sbjct: 530 LDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGM 589

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  YN ++  LCK      A + F  +     + +  TY I+I  L  +G + +AR 
Sbjct: 590 RPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARY 649

Query: 362 LFLDMEAK 369
           +  ++ AK
Sbjct: 650 VLSELYAK 657



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 158/348 (45%), Gaps = 37/348 (10%)

Query: 44  EMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH 103
           E ++  GE      P+    T +I  LC+ G    A  +    +      +V  YN+L+ 
Sbjct: 63  ETSSSRGE-----APDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVA 117

Query: 104 GFCYANDWNEAK--------------------------------CLFIEMMDQGVQPNVV 131
           G+C     + A+                                 L  +M+ +G QP+VV
Sbjct: 118 GYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVV 177

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++ V++  +CK+    EA  +L+ M   G  PN   YN +++G C  GRV+ A+E+   +
Sbjct: 178 TYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRL 237

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            S G + ++ SY+ ++ G C  +  +    L++EM+ K   P+ V ++ L         V
Sbjct: 238 SSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMV 297

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           ERA ++  +M +HG   +T      I+ +CK G + +A +    + +     D  +Y  +
Sbjct: 298 ERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTV 357

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + GLC++GR + A EL   + R     + VT+N  I  LC  G +++A
Sbjct: 358 LRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 405



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 134/269 (49%), Gaps = 9/269 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +  +GC   + TYN L++G C  G    AL LF  +          C+PNT+
Sbjct: 404 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---------CEPNTI 454

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ GLC    +D A EL   M  ++   N VT+N L+  FC      EA  L  +M
Sbjct: 455 TYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 514

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN+++FN +++ + K+   +EA  LL  ++  GV  +   Y++++D      R 
Sbjct: 515 MEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRT 574

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++  +++ MG +  V  Y+ ++   CK  E + A+  ++ M+S G  P+   Y  L
Sbjct: 575 EEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIIL 634

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             GL     ++ A  +  E+   GV + +
Sbjct: 635 IEGLAHEGLLKEARYVLSELYAKGVLSKS 663



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 124/259 (47%), Gaps = 3/259 (1%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           +D  EA  L      +G  P+V     ++  LC+ G+  +A+R+L      G   + F Y
Sbjct: 53  DDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAY 112

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           NTL+ G+C  GR++ A  L  SM       + ++Y+ +I G C    +  AL+L  +ML 
Sbjct: 113 NTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G +P VV Y  L   + +      A  + DEM+  G   +   Y   I+G+C+ G + +
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A E+   L    ++ DI +Y  ++ GLC + R      LF  +     + + VT+++++ 
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVR 289

Query: 349 ALCADGKMDKARDLFLDME 367
             C  G +++A  +   M 
Sbjct: 290 FFCRGGMVERAIQVLQQMS 308



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 3/233 (1%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L     + EA+RL+E     G  P+ ++   L+   C  GR + A  +  + E+ G 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +VF+Y+ L+ GYC+   ++ A  L + M    + PD   Y  +  GL +  +V  A  
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D+M + G       Y   ++ +CK+    EA+ +   +R      +I  YN +I+G+C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + GR+  A E+   L       D+V+Y  ++  LCA  + D  + LF +M  K
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK 275


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/358 (34%), Positives = 198/358 (55%), Gaps = 11/358 (3%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK--- 72
           +PNVFT+N +IN LC+TG    A ++ E+M      +G  C PN V+Y T+IDG CK   
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMK----VYG--CSPNVVSYNTLIDGYCKLGG 273

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G + KA  +  +M + +++PN+ T+N LI GF   ++   +  +F EM+DQ V+PNV+S
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++N LC  GK+ EA  + + M+  GV+PN   YN L++GFC    +  A ++F S++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G       Y++LI+ YCK  +I+   +L  EM  +GI PDV  YN L  GL     +E
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A KLFD++   G+  D   +   ++G C+ G   +A  L + +  +  +     YN ++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512

Query: 313 DGLCKSGRLKIAWELFRSLPR-GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G CK G LK A  +   + +   L  +V +YN+++      GK++ A  L  +M  K
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 187/357 (52%), Gaps = 11/357 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCR---TGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A  +   ++V+GC PNV +YNTLI+G C+    G    A  + +EM   +        P
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND------VSP 294

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  T+  +IDG  K+  +  + ++F +M D+++ PNV++YNSLI+G C     +EA  + 
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  GVQPN++++N ++N  CKN  + EA  +   +   G  P   +YN L+D +C  
Sbjct: 355 DKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+++    L   ME  G   +V +Y+ LI G C+N  IE A  L+ ++ SKG+ PD+V +
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTF 473

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-R 297
           + L  G     +  +A  L  EM + G+      Y   + G CK G +  A  +   + +
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             +  +++ +YN L+ G  + G+L+ A  L   +    L+ + +TY I+   +   G
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 150/256 (58%), Gaps = 3/256 (1%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           ++ EM+ + +QPNV +FNV++N LCK GKM++A  ++E M   G  PN   YNTL+DG+C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269

Query: 177 L---TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
                G++ +A+ +   M       N+ +++ILI+G+ K+  + G++ ++ EML + +KP
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +V+ YN+L  GL    ++  A  + D+M   GV  +   Y   I+G CKN  + EA+++F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
            +++        R YN LID  CK G++   + L   + R  ++ DV TYN +I  LC +
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 354 GKMDKARDLFLDMEAK 369
           G ++ A+ LF  + +K
Sbjct: 450 GNIEAAKKLFDQLTSK 465



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/315 (32%), Positives = 162/315 (51%), Gaps = 11/315 (3%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           CKP       ++  L KE      + ++ +M    I PNV T+N +I+  C     N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCK---NGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
            +  +M   G  PNVVS+N +++  CK   NGKM +A  +L+ M++  V PN   +N L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           DGF     +  + ++F  M     K NV SY+ LING C   +I  A+S+  +M+S G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P+++ YN L  G  +   ++ A  +F  ++  G    T  Y   ID  CK G I +   L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
              +       D+  YNCLI GLC++G ++ A +LF  L    L  D+VT++I++   C 
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482

Query: 353 DGKMDKARDLFLDME 367
            G+  KA  L  +M 
Sbjct: 483 KGESRKAAMLLKEMS 497



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 147/274 (53%), Gaps = 8/274 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PNV +YN+LINGLC  G    A+++ ++M +     GV  +PN +TY  +I+G CK   
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDM 381

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A ++F  +K +   P    YN LI  +C     ++   L  EM  +G+ P+V ++N 
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC+NG ++ A +L + +   G+ P+   ++ LM+G+C  G   +A  L   M  MG
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQVERA 254
            K    +Y+I++ GYCK   ++ A ++ ++M   + ++ +V  YN L  G  +  ++E A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             L +EM   G+  +   Y    + +   G++ +
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/369 (34%), Positives = 192/369 (52%), Gaps = 7/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     K+   G   + FTY +LI G CR  +   A  +F  M N        C  N 
Sbjct: 221 VEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKG------CLRNE 274

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+YT +I G C+   VD+A +LF +M ++N  P V TY  +I   C      EA  +F E
Sbjct: 275 VSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKE 334

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++  QPNV ++ V++  LC++   D+A ++L  M++ G+ P+   YN L+DG+C  G 
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A E+   MES  C  N  +Y+ LI G+C+ K I  A+SL  +ML + ++P+VV YN 
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   +  A+KL   M   G+  D W Y  FID LCK G + EA  LF +L+   
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +   Y+ LIDG CK G++     L   +     + + +TYN +I   C +    +AR
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 361 DLFLDMEAK 369
            L +D+  K
Sbjct: 575 -LLVDIMIK 582



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/389 (31%), Positives = 185/389 (47%), Gaps = 33/389 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  LF ++    C P V TY  +I  LC+ G    ALN+F+EM                
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 47  ----------------NGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                           NG  E G++  P+ VTY  +IDG CK+G    A E+   M+  N
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLI--PSVVTYNALIDGYCKKGLSASALEILSLMESNN 409

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
            +PN  TYN LI GFC   + ++A  L  +M+++ +QPNVV++N++++  CK G +  A 
Sbjct: 410 CSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAY 469

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +LL LM + G+ P+ + Y+  +D  C  G V  A  LF S++  G K N   YS LI+GY
Sbjct: 470 KLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGY 529

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  ++     L  +MLS G  P+ + YN+L  G  +    + A  L D M +  +    
Sbjct: 530 CKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAA 589

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   ID L K+    +A ++F  +       D+  Y   I   C  GRLK A  L   
Sbjct: 590 DTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICK 649

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +    ++ D + Y + I A    G +D A
Sbjct: 650 MNAKGIMPDTMLYTLFIDAYGRFGSIDGA 678



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 167/337 (49%), Gaps = 6/337 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYN LI+G C+ G +  AL +   M + N      C PN  TY  +I G C+ 
Sbjct: 374 GLIPSVVTYNALIDGYCKKGLSASALEILSLMESNN------CSPNARTYNELILGFCRG 427

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + KA  L  KM +  + PNVVTYN LIHG C   D   A  L   M + G+ P+  ++
Sbjct: 428 KNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTY 487

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +V ++ LCK G ++EA  L E + + G++ N  +Y+TL+DG+C  G+V+    L   M S
Sbjct: 488 SVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS 547

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  N  +Y+ LI+GYCK K  + A  L   M+ + I+P    Y  L   L +  + ++
Sbjct: 548 AGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQ 607

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +FD+M   G   D + Y  FI   C +G + +A  L   +       D   Y   ID
Sbjct: 608 AHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFID 667

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
              + G +  A+ + + +          TY+ +I  L
Sbjct: 668 AYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHL 704



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 139/288 (48%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+ K ++L+M D+ + PN+ T N++++G+C   +  EA+    +++  G+  +  ++  
Sbjct: 185 IDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTS 244

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++   C+N  +D A+ +   M   G   N   Y  L+ GFC   RV+ A +LF  M    
Sbjct: 245 LILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDN 304

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C   V +Y+++I   C+      AL+++ EM  K  +P+V  Y  L   L E    + A 
Sbjct: 305 CWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAK 364

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           K+ + M   G+      Y   IDG CK G    A+E+   +       + R YN LI G 
Sbjct: 365 KILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGF 424

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           C+   +  A  L   +    L  +VVTYNI+IH  C +G +  A  L 
Sbjct: 425 CRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLL 472



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 177/397 (44%), Gaps = 35/397 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF  L+  G + N   Y+TLI+G C+ G       L ++M +        C PN++
Sbjct: 502 EARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG------CVPNSI 555

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++IDG CKE    +A+ L   M   +I P   TY  LI      +++++A  +F +M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+V  +   ++  C +G++ +A  L+  M   G+ P+  +Y   +D +   G +
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSI 675

Query: 182 NRAEELFVSMESMGCKHNVFSYSILIN--GYCKNKEI----------------------- 216
           + A  +   M  +GC+ + ++YS LI      K KE+                       
Sbjct: 676 DGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWR 735

Query: 217 ----EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               E  L L+ +M   G  P+   Y     GL ++  +E A +LFD M+  G + +   
Sbjct: 736 RVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDI 795

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + +   C+ G   EA+     +   ++   + +   L+ GL   G  + A  +F S  
Sbjct: 796 YNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFL 855

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +     D + + ++I  L   G  DK  DLF  ME +
Sbjct: 856 QCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQ 892



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 112/236 (47%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N+++  L +   +DE   +   M+   V PN F  NT+++G+C  G V  AE     + 
Sbjct: 172 YNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV 231

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   + F+Y+ LI GYC+NK ++ A +++  M +KG   + V Y  L  G  E  +V+
Sbjct: 232 QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVD 291

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A KLF +M           Y   I  LC+ G   EA+ +F+ +     + ++  Y  LI
Sbjct: 292 EALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLI 351

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             LC+      A ++   +    LI  VVTYN +I   C  G    A ++   ME+
Sbjct: 352 CSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMES 407



 Score =  111 bits (278), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 153/380 (40%), Gaps = 82/380 (21%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  K+   GC PN  TYN+LI+G C+  +   A  L + M   + E      P   TYT 
Sbjct: 541 LLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIE------PAADTYTI 594

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +ID L K+   D+A ++F +M     +P+V  Y + IH +C      +A+ L  +M  +G
Sbjct: 595 LIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKG 654

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+ + + + ++   + G +D A  +L+ M ++G  P+ + Y+      CL   ++ A+
Sbjct: 655 IMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYS------CLIKHLSNAK 708

Query: 186 -----------------------------------ELFVSMESMGCKHNVFSYSILINGY 210
                                              +LF  M   GC  N  +Y   I G 
Sbjct: 709 PKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGL 768

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF---------------------------- 242
           CK   +E A  L+  M  KG  P+  IYN+L                             
Sbjct: 769 CKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHL 828

Query: 243 -------IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
                   GL++    E+A ++F    +     D   ++  IDGL K G   +  +LF  
Sbjct: 829 DSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGI 888

Query: 296 LRILKYELDIRAYNCLIDGL 315
           +     ++  + Y+ LI+G 
Sbjct: 889 METQGCQIHPKTYSMLIEGF 908



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 35/244 (14%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIV------------------------- 37
           A  +  ++   GCEP+ +TY+ LI  L       V                         
Sbjct: 678 AFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRV 737

Query: 38  ----ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                L+LF +MA    E G  C PN  TY   I GLCK G ++ A  LF  MK++  +P
Sbjct: 738 DYEFTLDLFGKMA----EHG--CAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSP 791

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N   YNSL+   C    + EA      M++    P++ S  +++  L   G  ++A R+ 
Sbjct: 792 NEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVF 851

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
              +Q     +  V+  L+DG    G  ++  +LF  ME+ GC+ +  +YS+LI G+   
Sbjct: 852 CSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGI 911

Query: 214 KEIE 217
           +EI+
Sbjct: 912 QEID 915


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 193/369 (52%), Gaps = 4/369 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----CK 57
           E   +  KL +FGCE ++ +YN ++ GLC          L +EM   +     +    C 
Sbjct: 204 EGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCT 263

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   Y TIIDG+CKEG  + A E+  +M    + PNVV YN+++ G C A+ W +A+ L
Sbjct: 264 PDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEEL 323

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +    + V+FN++++  C+NG +D    LLE M++ G  P+   Y T+++GFC 
Sbjct: 324 LTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCK 383

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G ++ A  L  +M S GCK N  SY+I++ G C  +    A  L S M+ +G  P+ V 
Sbjct: 384 EGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVT 443

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +NT+   L +   VE+A +L  +M  +G   D  +Y T IDGL K G   EA+EL   + 
Sbjct: 444 FNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMI 503

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++  Y+ +   L + GR+    ++F ++    + +D V YN +I +LC   + D
Sbjct: 504 NKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETD 563

Query: 358 KARDLFLDM 366
            A D    M
Sbjct: 564 LAIDFLAYM 572



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 189/431 (43%), Gaps = 86/431 (19%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID-------- 68
           PN +TY  ++ GLC  G    AL + +EM + +      C P    Y  II+        
Sbjct: 114 PNAYTYFPVVRGLCGRGRIADALAVLDEMTSRS------CVPIPPMYHVIIESACRSGGY 167

Query: 69  ---------------------------GLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
                                       +C +G VD+  E+  K+       ++V+YN++
Sbjct: 168 SSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAV 227

Query: 102 IHGFCYANDWNEAKCLFIEMM----------DQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           + G C A  W + + L  EM+            G  P++  +  I++ +CK G  + A+ 
Sbjct: 228 LKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANE 287

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-------------------- 191
           +L  M   G++PN   YNT++ G C   R  +AEEL   M                    
Sbjct: 288 ILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFC 347

Query: 192 ------------ESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
                       E M   GC  +V +Y+ +ING+CK   I+ A+ L   M S G KP+ +
Sbjct: 348 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTI 407

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y  +  GL    +   A +L   M + G   +   + T I+ LCK G + +A+EL + +
Sbjct: 408 SYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQM 467

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +     D+ +Y+ +IDGL K+G+ + A EL   +    +  +V+TY+ M  AL  +G++
Sbjct: 468 LVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRI 527

Query: 357 DKARDLFLDME 367
           DK   +F +++
Sbjct: 528 DKVIQMFDNIQ 538



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 147/323 (45%), Gaps = 29/323 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF---------- 52
           A  +  ++  +G +PNV  YNT++ G+C       A  L  EM   N             
Sbjct: 285 ANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVD 344

Query: 53  -----GVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                G+V              C P+ +TYTT+I+G CKEG +D+A  L   M      P
Sbjct: 345 FFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKP 404

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N ++Y  ++ G C    W +A+ L   M+ QG  PN V+FN I+N LCK G +++A  LL
Sbjct: 405 NTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELL 464

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M+  G  P+   Y+T++DG    G+   A EL   M + G   NV +YS +     + 
Sbjct: 465 KQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALARE 524

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             I+  + ++  +    I+ D V+YN +   L +  + + A      M  +G   +   Y
Sbjct: 525 GRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTY 584

Query: 274 RTFIDGLCKNGYIVEAVELFRTL 296
              I GL   G + EA +L   L
Sbjct: 585 TALIKGLASEGLLCEAQDLLSEL 607



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 169/402 (42%), Gaps = 54/402 (13%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L   G    V  YN ++ G CR G    A  L            V   PN  TY  ++ G
Sbjct: 75  LDAAGNAAGVVDYNAMVAGYCRVGQVEAARRL---------AAAVPVPPNAYTYFPVVRG 125

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC  G +  A  +  +M   +  P    Y+ +I   C +  ++ A  +   +  +G   +
Sbjct: 126 LCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLD 185

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL-- 187
             + N+++N +C  G +DE   +L  +   G   +   YN ++ G C   R    EEL  
Sbjct: 186 TGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMD 245

Query: 188 --------FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
                      M   GC  ++  Y+ +I+G CK    E A  + S M S G+KP+VV YN
Sbjct: 246 EMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYN 305

Query: 240 TLFIG-------------LFEIHQ----------------------VERAFKLFDEMQRH 264
           T+  G             L E++Q                      V+R  +L ++M  H
Sbjct: 306 TVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEH 365

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D   Y T I+G CK G I EAV L + +     + +  +Y  ++ GLC + R   A
Sbjct: 366 GCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDA 425

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            EL   + +   + + VT+N +I+ LC  G +++A +L   M
Sbjct: 426 EELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQM 467



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 154/356 (43%), Gaps = 22/356 (6%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           + LI  LC  G T  A+   +   N  G          V Y  ++ G C+ G V+ A+ L
Sbjct: 56  SALIRSLCVAGRTADAVRALDAAGNAAG---------VVDYNAMVAGYCRVGQVEAARRL 106

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
              +    + PN  TY  ++ G C      +A  +  EM  +   P    ++VI+   C+
Sbjct: 107 AAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACR 163

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
           +G    A R+LE +   G   +    N +++  C  G V+   E+   +   GC+ ++ S
Sbjct: 164 SGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVS 223

Query: 203 YSILINGYCKNK----------EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           Y+ ++ G C  K          E+       S+M   G  PD+ +Y T+  G+ +    E
Sbjct: 224 YNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHE 283

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++   M  +G+  +   Y T + G+C      +A EL   +      LD   +N L+
Sbjct: 284 VANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILV 343

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           D  C++G +    EL   +     + DV+TY  +I+  C +G +D+A  L  +M +
Sbjct: 344 DFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPS 399



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 117/228 (51%), Gaps = 6/228 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC+PN  +Y  ++ GLC T   + A  L   M          C PN V
Sbjct: 389 EAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQG------CLPNPV 442

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ TII+ LCK+G V++A EL  +M     NP++++Y+++I G   A    EA  L   M
Sbjct: 443 TFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVM 502

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ PNV++++ +   L + G++D+  ++ + +    +R +A +YN ++   C     
Sbjct: 503 INKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRET 562

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           + A +    M S GC  N  +Y+ LI G      +  A  L SE+ S+
Sbjct: 563 DLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A  L  ++   GC PN  T+NT+IN LC+ G    A+ L ++M  NG       C P+
Sbjct: 423 VDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNG-------CNPD 475

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y+T+IDGL K G  ++A EL   M ++ I PNV+TY+S+          ++   +F 
Sbjct: 476 LISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFD 535

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            + D  ++ + V +N +++ LCK  + D A   L  M+  G  PN   Y  L+ G    G
Sbjct: 536 NIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEG 595

Query: 180 RVNRAEELFVSMES 193
            +  A++L   + S
Sbjct: 596 LLCEAQDLLSELCS 609



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 125/282 (44%), Gaps = 18/282 (6%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           ++LI   C A    +A    +  +D  G    VV +N ++   C+ G+++ A RL     
Sbjct: 56  SALIRSLCVAGRTADA----VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRL---AA 108

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            + V PNA+ Y  ++ G C  GR+  A  +   M S  C      Y ++I   C++    
Sbjct: 109 AVPVPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL +   + +KG   D    N +   + +   V+   ++  ++   G  AD  +Y   +
Sbjct: 169 SALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVL 228

Query: 278 DGLCKNGYIVEAVELFRTLRILKYEL----------DIRAYNCLIDGLCKSGRLKIAWEL 327
            GLC      +  EL   +  +   L          DIR Y  +IDG+CK G  ++A E+
Sbjct: 229 KGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEI 288

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +P   L  +VV YN ++  +C+  + +KA +L  +M  K
Sbjct: 289 LSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQK 330


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 200/365 (54%), Gaps = 7/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +++  G  P+  TYN++I+G  + G     +  FEEM +      + C+P+ +T
Sbjct: 152 ARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS------MSCEPDVIT 205

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y ++I+  CK G + K  E + +MK   + PNVV+Y++L+  FC  +   +A   +++M 
Sbjct: 206 YNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMR 265

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PN  ++  +++  CK G + +A RL   M+++GV  N   Y  L+DG C   R+ 
Sbjct: 266 RVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMK 325

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AE+LF  M + G   N+ SY+ LI+G+ K K ++ AL L +E+  +GI+PD+++Y T  
Sbjct: 326 EAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFI 385

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL  + ++E A  + +EMQ +G+ A+T  Y T +D   K+G   E + L   ++ L +E
Sbjct: 386 WGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHE 445

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARD 361
           + +  +  LIDGLCK+  +  A + F  +     L  +   Y  MI  LC + ++  A  
Sbjct: 446 VTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATT 505

Query: 362 LFLDM 366
           LF  M
Sbjct: 506 LFEQM 510



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 184/342 (53%), Gaps = 7/342 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +A   ++ +R  G  PN FTY +L++  C+ G+   A  L  EM     E GV  + N 
Sbjct: 255 QQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML----EVGV--EWNV 308

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +IDGLC    + +A++LF KM    + PN+ +YN+LIHGF  A + + A  L  E
Sbjct: 309 VTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNE 368

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G+QP+++ +   +  LC   K++ A  ++  M + G++ N  +Y TLMD +  +G 
Sbjct: 369 LKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGN 428

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYN 239
                 L   M+ +  +  V ++ +LI+G CKNK +  A+  +  M +  G++P+  +Y 
Sbjct: 429 PTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYT 488

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GL + +QV+ A  LF++M + G+  D  AY + +DG  K G ++EA+ L   +  +
Sbjct: 489 AMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEI 548

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
             +LD+ AY  L+ G  +  +L+ A      +    ++ D V
Sbjct: 549 GMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEV 590



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 180/366 (49%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F K++ F   P   + N L++   + G T      F++M       G   KP   
Sbjct: 81  EATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM------IGAGSKPTVF 134

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID + KEG ++ A+ LF +MK   + P+ VTYNS+I G+      ++    F EM
Sbjct: 135 TYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +P+V+++N ++N  CK+GK+ +       M Q G++PN   Y+TL+D FC    +
Sbjct: 195 KSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMM 254

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A + +V M  +G   N F+Y+ L++  CK   +  A  L +EML  G++ +VV Y  L
Sbjct: 255 QQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTAL 314

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A KLF +M   GV  +  +Y   I G  K   +  A+EL   L+    
Sbjct: 315 IDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 374

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y   I GLC   +++ A  +   +    + A+ + Y  ++ A    G   +   
Sbjct: 375 QPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLH 434

Query: 362 LFLDME 367
           L  +M+
Sbjct: 435 LLEEMQ 440



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/315 (29%), Positives = 168/315 (53%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VC P    +  +   L   G +++A + F KMK   + P   + N L+H F      +  
Sbjct: 58  VCVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 117

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           K  F +M+  G +P V ++N++++ + K G ++ A  L E M   G+ P+   YN+++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +   GR++     F  M+SM C+ +V +Y+ LIN +CK+ ++   L  Y EM   G+KP+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPN 237

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+TL     +   +++A K + +M+R G   + + Y + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++  Y  LIDGLC + R+K A +LF  +    +I ++ +YN +IH      
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 355 KMDKARDLFLDMEAK 369
            MD+A +L  +++ +
Sbjct: 358 NMDRALELLNELKGR 372



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/263 (29%), Positives = 129/263 (49%), Gaps = 7/263 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  +L+  G +P++  Y T I GLC       A  +  EM     E G+  K NT+ 
Sbjct: 362 ALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQ----ENGI--KANTLI 415

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++D   K G   +   L  +M++ +    VVT+  LI G C     ++A   F  M 
Sbjct: 416 YTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMS 475

Query: 123 -DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+QPN   +  +++ LCK  ++  A+ L E M Q G+ P+   Y +LMDG    G +
Sbjct: 476 NDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNM 535

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M  +G K ++ +Y+ L+ G+ +  +++ A S   EM+ + I PD V+   +
Sbjct: 536 LEALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGV 595

Query: 242 FIGLFEIHQVERAFKLFDEMQRH 264
               +E+  ++ A  L   + +H
Sbjct: 596 LKKHYELGCIDEAVGLQSYLMKH 618


>gi|414591629|tpg|DAA42200.1| TPA: hypothetical protein ZEAMMB73_531547 [Zea mays]
          Length = 462

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/354 (35%), Positives = 195/354 (55%), Gaps = 28/354 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+++T+N LI      G    A+ +F EM     + GV  KP+ VTY T+I  LC+ 
Sbjct: 59  GIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMR----DHGV--KPHVVTYMTVIAALCRI 112

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E F +M D+ + P+   Y+ LI GFC      +AK L  E+M+ G++ ++V F
Sbjct: 113 GKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFF 172

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             I+N LCK G++ +A  + +L + +G+ P+A VYN LMDG+CL G++ +A  +F +M S
Sbjct: 173 GSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 232

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV                        EML KGIKP  ++YN +  GLFE  +   
Sbjct: 233 AGIEPNVVG----------------------EMLQKGIKPSTILYNIIIDGLFEAGRTVP 270

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   F EM   G+A +   Y   + GL KN    EA+ LF+ LR +  ++DI   N +I 
Sbjct: 271 AKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 330

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+ ++ R++ A +LF S+ R  L+   VTY+IMI  L  +G +++A D+F  M+
Sbjct: 331 GMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQ 384



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 171/333 (51%), Gaps = 19/333 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G +P+V TY T+I  LCR G    A+  F +M +     GVV  P+  
Sbjct: 82  KAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQ----GVV--PDKY 135

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C  G + KAKEL  ++ +  +  ++V + S+I+  C      +A+ +F   
Sbjct: 136 AYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLT 195

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI-------------QIGVRPNAFVY 168
           ++ G+ P+ V +N++M+  C  GKM++A R+ + M+             Q G++P+  +Y
Sbjct: 196 VNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGEMLQKGIKPSTILY 255

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N ++DG    GR   A+  F  M   G   N  +YSI++ G  KN+  + A+ L+ E+ +
Sbjct: 256 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 315

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             +K D++  NT+  G+F+  +VE A  LF  + R G+      Y   I  L K G + E
Sbjct: 316 MNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEE 375

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           A ++F +++    E D R  N ++  L K   +
Sbjct: 376 AEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEI 408



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 171/343 (49%), Gaps = 28/343 (8%)

Query: 26  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLK 85
           +  LC+ G      ++F+ MA   G+      P+  +YT +++G   +G +    +LF  
Sbjct: 1   MGSLCKYGKIKEDRDVFDTMAM-KGQ-----NPDVFSYTIMLNGYATKGCLVDMTDLFDL 54

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M  + I P++ T+N LI  +      ++A  +F EM D GV+P+VV++  ++  LC+ GK
Sbjct: 55  MLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGK 114

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           MD+A      MI  GV P+ + Y+ L+ GFC  G + +A+EL   + + G + ++  +  
Sbjct: 115 MDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGS 174

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +IN  CK   +  A +++   ++ G+ PD V+YN L  G   + ++E+A ++FD M   G
Sbjct: 175 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 234

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +       +  + + G         +   IL        YN +IDGL ++GR   A 
Sbjct: 235 IEPNV------VGEMLQKG--------IKPSTIL--------YNIIIDGLFEAGRTVPAK 272

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             F  +    +  +  TY+I++  L  +   D+A  LF ++ A
Sbjct: 273 VKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRA 315



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 136/306 (44%), Gaps = 19/306 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++   G   ++  + ++IN LC+ G  + A N+F+   N      V   P+ 
Sbjct: 151 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN------VGLHPDA 204

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV-------------TYNSLIHGFCY 107
           V Y  ++DG C  G ++KA  +F  M    I PNVV              YN +I G   
Sbjct: 205 VVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGEMLQKGIKPSTILYNIIIDGLFE 264

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           A     AK  F EM + G+  N  ++++++  L KN   DEA  L + +  + V+ +   
Sbjct: 265 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 324

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            NT++ G   T RV  A++LF S+   G      +YSI+I    K   +E A  ++S M 
Sbjct: 325 LNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQ 384

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           + G +PD  + N +   L + +++ RA     ++     + +       +D     G   
Sbjct: 385 NAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCR 444

Query: 288 EAVELF 293
           E +   
Sbjct: 445 EQIRFL 450


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 201/368 (54%), Gaps = 7/368 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A++LF ++   G  P+   +  LI GLC+ G    A   F++M          C+PN   
Sbjct: 134 ASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG------CQPNVPV 187

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++ GLC  G +++A  LF +MK  + +P+VVTYN+L+   C A    E   LF  M 
Sbjct: 188 YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMR 247

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PNV++F+ +++ LC+ G++++A  +   M++ G +PN + Y TL+ G C   +V 
Sbjct: 248 AAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVI 307

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNTL 241
           +A ELF  M       +  +Y+ LI GYCK   ++ A  LY EM    G++P +V +NTL
Sbjct: 308 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 367

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ ++ RA +L  EM   G+AAD+  YR  I GL +   + EA+E+++ +R  K+
Sbjct: 368 IDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKF 427

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD  +    + GLCK+G +  A+ +F +  +   + +  T+ I+  +L   G+++ A+ 
Sbjct: 428 LLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQK 487

Query: 362 LFLDMEAK 369
           L    +A+
Sbjct: 488 LMEPAKAR 495



 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 196/369 (53%), Gaps = 7/369 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  +  ++   GC P+VF +N ++ G  R+ +   A  +++ M     E G   KP+ V
Sbjct: 28  ESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV----ESGY--KPDNV 81

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I GL K G +D++ ++  +M      P++  Y+SL+     A   + A  LF EM
Sbjct: 82  SYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEM 141

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+ + F  ++  LC+ GK+ +AS   + M + G +PN  VYN L+ G C +G++
Sbjct: 142 IRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQL 201

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  M+S  C  +V +Y+ L++  CK + +E    L+  M + G  P+V+ ++TL
Sbjct: 202 EQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTL 261

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E+A ++F  M   G   + + Y T I GLC+   +++A ELF  +     
Sbjct: 262 IHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACI 321

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKAR 360
             D  AYN LI G CK G +  A +L+R +  G  L   +VT+N +I   C  GK+ +A 
Sbjct: 322 PPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 381

Query: 361 DLFLDMEAK 369
           +L  +M  K
Sbjct: 382 ELVAEMGTK 390



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 187/349 (53%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NVFTY+++I  L +      +  + EEM          C P+   +  ++ G  +   ++
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEM------MAAGCNPDVFAFNGVMQGFARSNNME 62

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA+E++  M +    P+ V+Y+ LIHG       +E+  +  EM+ +G  P++ +++ ++
Sbjct: 63  KAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLV 122

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             L K  ++D AS L + MI+ G  P+  ++  L+ G C  G+V  A E F  M   GC+
Sbjct: 123 RALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQ 182

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV  Y++L++G C + ++E A +L++EM S    PDVV YNTL   + +  +VE   KL
Sbjct: 183 PNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKL 242

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F+ M+  G   +   + T I GLC+ G + +A+E+F ++     + +   Y  LI GLC+
Sbjct: 243 FEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCR 302

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + ++  A ELF  + +  +  D V YN +I   C  G MD+A  L+ +M
Sbjct: 303 AEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 154/281 (54%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M+D+NI  NV TY+S+I          E+  +  EMM  G  P+V +FN +M    ++  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           M++A  + + M++ G +P+   Y+ L+ G    G+++ + ++   M   G   ++ +YS 
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+    K + ++ A SL+ EM+  G  PD +++  L +GL +  +V+ A + F +M +HG
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +   Y   + GLC +G + +A  LF  ++      D+  YN L+D +CK+ R++   
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +LF ++     + +V+T++ +IH LC  G+++KA ++F  M
Sbjct: 241 KLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 281



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 138/269 (51%), Gaps = 7/269 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF  +R  G  PNV T++TLI+GLCRTG    AL +F  M          CKPN  
Sbjct: 238 EGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CKPNKY 291

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I GLC+   V +A+ELF KM    I P+ V YNSLI G+C     +EA+ L+ EM
Sbjct: 292 TYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351

Query: 122 MD-QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               G+QP +V+FN +++  CK GK+  A+ L+  M   G+  ++  Y  L+ G     +
Sbjct: 352 SGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATK 411

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A E++  M       +  S    + G CK   I+ A +++      G  P+   +  
Sbjct: 412 LDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRI 471

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L   L ++ +VE A KL +  +   + A 
Sbjct: 472 LSESLIKLGRVEDAQKLMEPAKARDITAQ 500



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 82/248 (33%), Positives = 136/248 (54%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+ +  NV +++ I+  L K  K +E+ ++LE M+  G  P+ F +N +M GF  +  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A E++  M   G K +  SY ILI+G  K  +++ +L + SEM+ +G  P +  Y++
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L +  +V+ A  LFDEM R G   D   +   I GLC+ G + +A E F+ +    
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHG 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + ++  YN L+ GLC SG+L+ A  LF  +       DVVTYN ++ A+C   ++++  
Sbjct: 181 CQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGC 240

Query: 361 DLFLDMEA 368
            LF  M A
Sbjct: 241 KLFEAMRA 248



 Score = 97.8 bits (242), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 5/188 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF K+      P+   YN+LI G C+ G    A  L+ EM+ G G      +P  
Sbjct: 307 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG-----LQPTI 361

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT+ T+IDG CK G + +A EL  +M  + +  +  TY  LI G   A   +EA  ++ +
Sbjct: 362 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQ 421

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++    + VS    +  LCK G +D+A  + E   + G  PN   +  L +     GR
Sbjct: 422 MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGR 481

Query: 181 VNRAEELF 188
           V  A++L 
Sbjct: 482 VEDAQKLM 489


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/399 (33%), Positives = 206/399 (51%), Gaps = 36/399 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----------- 50
           EAA  F  +   G +PN+ TY+ L++G    G  +  LNLF  M  GNG           
Sbjct: 350 EAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM-EGNGIVADQRVFNIV 408

Query: 51  ---------------------EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
                                E GV+  P+  TY  +I    + G +  A + F +M   
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVI--PDACTYGIVIAAFSRMGRLADAMDKFNQMIAM 466

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV-QPNVVSFNVIMNELCKNGKMDE 148
            + P  + Y+SLI GFC   +  +AK L  EMM +G+ +PN+V FN I+N LCK G++ E
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A  + + +I IG RP+   +N+L+DG+ L G++ +A  +  +M S G + +V SY+ LI+
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLID 586

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           GYC+N  I+  L L+ EMLSKG+KP  + Y  +  GLF   +   A K+  EM   G   
Sbjct: 587 GYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTM 646

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           D       + GLC+N    EA+ +F+ L  +  + +I   N +ID + K  + + A ELF
Sbjct: 647 DISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELF 706

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            S+    L+ +  TY +MI  L  +G +++A ++F  ME
Sbjct: 707 DSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLME 745



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 185/359 (51%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G EP+  +YNT++  LC    +  AL+L   M   +G     C PN VTY T
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGG----CSPNVVTYNT 232

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL +EG V KA  LF +M  + + P+VVTY S+I   C A   ++A+ +  +M+  G
Sbjct: 233 VIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNG 292

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            QPN V++N +++    +G+  E + +   M   G+ PN    N+ M   C  G+   A 
Sbjct: 293 FQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAA 352

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E F SM + G K N+ +YS+L++GY         L+L++ M   GI  D  ++N +    
Sbjct: 353 EFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAY 412

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++    +F +MQ  GV  D   Y   I    + G + +A++ F  +  +  + + 
Sbjct: 413 GKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEG 472

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y+ LI G C  G L  A EL    + RG+   ++V +N +I++LC +G++ +A D+F
Sbjct: 473 IVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIF 531



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 180/385 (46%), Gaps = 32/385 (8%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC-------------------- 56
           P V TYN L++  CRT    V   LF        +  V+                     
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 57  ----------KPNTVTYTTIIDGLCKEGFVDKAKELFLKM--KDENINPNVVTYNSLIHG 104
                     +P+T++Y T++  LC++    +A +L   M  K    +PNVVTYN++IHG
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
                + ++A  LF EMM QGV P+VV++  I++ LCK   MD+A  +L  MI  G +PN
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN ++ G+ ++G+      +F  M S G   N+ + +  ++  CK+ + + A   + 
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            M +KG KP++V Y+ L  G            LF+ M+ +G+ AD   +   ID   K G
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + E + +F  ++      D   Y  +I    + GRL  A + F  +    L  + + Y+
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +I   C  G + KA++L  +M ++
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSR 501



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 196/432 (45%), Gaps = 65/432 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVA-LNLFEEMANG------------ 48
           +A  LF ++   G  P+V TY ++I+ LC+      A L L + ++NG            
Sbjct: 245 KACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMI 304

Query: 49  -----NGEFGVVCK-----------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                +G++                PN VT  + +  LCK G   +A E F  M  +   
Sbjct: 305 HGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHK 364

Query: 93  PNVVTYNSLIHGF----CYANDWN-------------------------------EAKCL 117
           PN+VTY+ L+HG+    C+ +  N                               E   +
Sbjct: 365 PNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLI 424

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M +QGV P+  ++ +++    + G++ +A      MI +G++P   VY++L+ GFC+
Sbjct: 425 FTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCM 484

Query: 178 TGRVNRAEELFVSMESMGC-KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            G + +A+EL   M S G  + N+  ++ +IN  CK   +  A  ++  ++  G +PDV+
Sbjct: 485 HGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVI 544

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N+L  G   + ++E+AF + D M   G+  D  +Y T IDG C+NG I + + LF  +
Sbjct: 545 TFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEM 604

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                +     Y  ++ GL   GR   A ++   +       D+ T  I++  LC +   
Sbjct: 605 LSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCD 664

Query: 357 DKARDLFLDMEA 368
           D+A  +F  + A
Sbjct: 665 DEAIAMFKKLGA 676



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 124/254 (48%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F  +   G  P+V T+N+LI+G    G    A  + + M +   E      P+ 
Sbjct: 525 VEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIE------PDV 578

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T+IDG C+ G +D    LF +M  + + P  +TY  ++HG         AK +  E
Sbjct: 579 VSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G   ++ +  +I+  LC+N   DEA  + + +  + V+ N  + NT++D      +
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRK 698

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A+ELF S+ + G   N  +Y ++I    K   +E A +++S M   G  P   + N 
Sbjct: 699 REEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNY 758

Query: 241 LFIGLFEIHQVERA 254
           +   L E  ++ +A
Sbjct: 759 IIRVLLEKGEIVKA 772


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/369 (34%), Positives = 199/369 (53%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  ++  +  +G  P V TYNT+++  C+ G    AL+L  +M     E G  C P+ 
Sbjct: 219 VKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQ----ERG--CYPSE 272

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT+  +I+GL K+G + +AK L  +M    +  +  TYN LI G+C      EA  L+ E
Sbjct: 273 VTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEE 332

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV P V S N IM   CK GKM +A + L  M++  + P+   YNTL+ GFC  G 
Sbjct: 333 MVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGN 392

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  L   +       N+ +Y+ LI+G C+  ++E AL L  +M+++GI PDVV Y  
Sbjct: 393 IGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTV 452

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++  +  A + FDEM   G+A D +AY   I G  K G   +A +L   +    
Sbjct: 453 LVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKG 512

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           +  D+  YN  ++GLCK G L+ A EL + + R   + D VTY   +HA   +G + + R
Sbjct: 513 FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGR 572

Query: 361 DLFLDMEAK 369
           ++F DM ++
Sbjct: 573 EIFYDMLSR 581



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/321 (33%), Positives = 167/321 (52%), Gaps = 6/321 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +LR      N+ TYNTLI+GLCR G    AL L E+M N          P+ V
Sbjct: 395 EAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRG------IHPDVV 448

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++G CK G +  AKE F +M    + P+   Y + I G     D  +A  L  EM
Sbjct: 449 TYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEM 508

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+V+++NV +N LCK G ++EA  LL+ MI+ G  P+   Y + M      G +
Sbjct: 509 LTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHL 568

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               E+F  M S G    V +Y++LI+ +  N  ++ A++ + EM  KG+ P+V+ YN L
Sbjct: 569 REGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVL 628

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ ++++A K F EMQ  G+  + + Y   I+  C  G   EA+ L+  +   + 
Sbjct: 629 INGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRI 688

Query: 302 ELDIRAYNCLIDGLCKSGRLK 322
             D   +  L+  L K  +++
Sbjct: 689 RPDSCTHGALLKKLDKDYKVQ 709



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/369 (28%), Positives = 178/369 (48%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA AL+ ++   G  P V ++NT++ G C+ G    A     +M   N        P+ 
Sbjct: 324 VEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKN------LMPDI 377

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y T+I G C+ G + +A  L  +++  N++ N+VTYN+LI G C   D   A  L  +
Sbjct: 378 ISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKED 437

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ P+VV++ V++N  CK G M  A    + M+ +G+ P+ F Y   + G    G 
Sbjct: 438 MINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGD 497

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             +A +L   M + G   +V +Y++ +NG CK   +E A  L  +M+  G  PD V Y +
Sbjct: 498 TAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTS 557

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                 E   +    ++F +M   G       Y   I     NG +  A+  F  ++   
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  YN LI+G CK  ++  A + F  +    +  +  TY I+I+  C  GK  +A 
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEAL 677

Query: 361 DLFLDMEAK 369
            L+  M  K
Sbjct: 678 RLYAQMLGK 686



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 168/345 (48%), Gaps = 37/345 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+      I+  L  +  + KA E++  M +  I P V TYN+++H FC   +   A  L
Sbjct: 200 PDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDL 259

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M ++G  P+ V+FNV++N L K G++ +A  L++ M + G+R + + YN L+ G+C 
Sbjct: 260 VPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCK 319

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G +  A  L+  M + G    V S++ ++ G+CK  ++  A    S+ML K + PD++ 
Sbjct: 320 KGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIIS 379

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNTL  G   +  +  AF L DE++   ++ +   Y T IDGLC+ G +  A++L   + 
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS--------------------------- 330
                 D+  Y  L++G CK G + +A E F                             
Sbjct: 440 NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTA 499

Query: 331 ---------LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                    L +G    DV+TYN+ ++ LC  G +++A +L   M
Sbjct: 500 KAFKLQEEMLTKG-FPPDVITYNVFVNGLCKLGNLEEAGELLQKM 543



 Score =  130 bits (328), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 136/289 (47%), Gaps = 37/289 (12%)

Query: 115 KCLFI--EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +CL +  +MM     P+V + N I+  L     + +A  +  +M + G+RP    YNT++
Sbjct: 185 QCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN------------------------ 208
             FC  G V RA +L   M+  GC  +  ++++LIN                        
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLR 304

Query: 209 -----------GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
                      GYCK   +  AL+L+ EM+++G+ P V  +NT+  G  +  ++  A + 
Sbjct: 305 VSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQ 364

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             +M +  +  D  +Y T I G C+ G I EA  L   LR      +I  YN LIDGLC+
Sbjct: 365 LSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCR 424

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G L+ A +L   +    +  DVVTY ++++  C  G M  A++ F +M
Sbjct: 425 LGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEM 473



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 109/214 (50%), Gaps = 6/214 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYN  +NGLC+ G+   A  L ++M   +G       P+ VTYT+ +    + 
Sbjct: 512 GFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIR-DGHV-----PDHVTYTSFMHAHMEN 565

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + + +E+F  M      P VVTY  LIH        + A   F+EM ++GV PNV+++
Sbjct: 566 GHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITY 625

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           NV++N  CK  KMD+A +    M + G+ PN + Y  L++  C  G+   A  L+  M  
Sbjct: 626 NVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLG 685

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
              + +  ++  L+    K+ +++    + S +L
Sbjct: 686 KRIRPDSCTHGALLKKLDKDYKVQAVQFIESLIL 719



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/215 (22%), Positives = 91/215 (42%), Gaps = 13/215 (6%)

Query: 155 LMIQIGVRPNAFVYNTLMDGF---CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           ++ Q G + + + +  ++      CL        E  +S E  G         +LI GY 
Sbjct: 129 VLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEMYGI------VDVLIGGYL 182

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
             +     L ++ +M+     PDV   N +   L + + + +A +++  M  +G+     
Sbjct: 183 NYQ----CLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVT 238

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y T +   CK G +  A++L   ++          +N LI+GL K G L+ A  L + +
Sbjct: 239 TYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM 298

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +  L     TYN +I   C  G + +A  L+ +M
Sbjct: 299 AKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEM 333


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/366 (34%), Positives = 197/366 (53%), Gaps = 8/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPNT 60
           EA AL  +++  GC P+V TYN+LI+G  + G         EE+    GE  G  C+P+ 
Sbjct: 212 EARALLARMKAIGCSPDVVTYNSLIDGYGKCGE-------LEEVEKLVGEMRGCGCRPDV 264

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +++  CK G +++A   F +MK E +  NVVT+++ +  FC      EA  LF +
Sbjct: 265 VTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQ 324

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN V++  +++  CK G++D+A  L   M+Q GV  N   Y  L+DG C  G+
Sbjct: 325 MRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGK 384

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  AE++F  ME  G + N   Y+ LI+G+   K  E ALSL SEM  KG++ DV +Y  
Sbjct: 385 VAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGA 444

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL  + +++ A  L ++M   G+  +   Y   +D   K     EA+ L + +    
Sbjct: 445 LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG 504

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           +  +I  Y  L+DGLCK+G +  A   F  +    L  +V  Y  ++  LC +G++DKA 
Sbjct: 505 FRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAV 564

Query: 361 DLFLDM 366
            L  +M
Sbjct: 565 LLLDEM 570



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 191/368 (51%), Gaps = 8/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++R+ G +PN  TY  L++G C+ G    AL L  EM             N V
Sbjct: 317 EAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPL------NVV 370

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG-FCYANDWNEAKCLFIE 120
           TYT ++DGLCKEG V +A+++F  M+   I  N + Y +LIHG F Y N    A  L  E
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNS-ERALSLLSE 429

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G++ +V  +  ++  LC   K+DEA  LL  M + G++PN  +Y  +MD      +
Sbjct: 430 MKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARK 489

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A  L   M   G + N+ +Y  L++G CK   I+ A+S +++M+  G++P+V  Y  
Sbjct: 490 ESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTA 549

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  ++++A  L DEM   G++ D     + +DG  K G + +A  L   +    
Sbjct: 550 LVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSG 609

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +LD+  Y C + G C    ++ A E+   +    +  D V YN +I+     G M++A 
Sbjct: 610 LQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAA 669

Query: 361 DLFLDMEA 368
            L  +ME+
Sbjct: 670 ILQNEMES 677



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 174/346 (50%), Gaps = 11/346 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     ++R     PN  T N ++  L R   + +A  LFE++            PN  
Sbjct: 146 DAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLFEQLP----------APNVF 195

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID LCKEG + +A+ L  +MK    +P+VVTYNSLI G+    +  E + L  EM
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+VV++N ++N  CK G+M+ A      M + GV  N   ++T +D FC  G V
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMV 315

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M   G K N  +Y+ L++G CK   ++ AL L +EM+ +G+  +VV Y  L
Sbjct: 316 REAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVL 375

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V  A  +F  M+R G+ A+   Y T I G         A+ L   ++    
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR-GVLIADVVTYNIM 346
           ELD+  Y  LI GLC   +L  A  L   +   G+   +V+  NIM
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIM 481



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 135/242 (55%), Gaps = 4/242 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN  + N I+  L +    + A RL E +      PN F +N ++D  C  G +  A 
Sbjct: 159 VPPNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEAR 214

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M+++GC  +V +Y+ LI+GY K  E+E    L  EM   G +PDVV YN L    
Sbjct: 215 ALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCF 274

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  ++ERA+  F EM+R GV A+   + TF+D  CKNG + EA++LF  +R+   + + 
Sbjct: 275 CKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNE 334

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y CL+DG CK+GRL  A  L   + +  +  +VVTY +++  LC +GK+ +A D+F  
Sbjct: 335 VTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRL 394

Query: 366 ME 367
           ME
Sbjct: 395 ME 396



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 181/368 (49%), Gaps = 11/368 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKPNTV 61
           AA +  + R+F   P+     +L++ L   GH   +A +L + +       G        
Sbjct: 76  AAHILARARLF---PH---SRSLLSRLLAPGHHPHLAASLVDLLHRAALALGPRRSALPS 129

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
              T++  L   G +D A     ++++  + PN  T N ++   C A + +    L   +
Sbjct: 130 VVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHIL--LCLARERSSE--LAWRL 185

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +Q   PNV +FN++++ LCK G + EA  LL  M  IG  P+   YN+L+DG+   G +
Sbjct: 186 FEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGEL 245

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              E+L   M   GC+ +V +Y+ L+N +CK   +E A S ++EM  +G+  +VV ++T 
Sbjct: 246 EEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTF 305

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +   V  A KLF +M+  G+  +   Y   +DG CK G + +A+ L   +     
Sbjct: 306 VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGV 365

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L++  Y  L+DGLCK G++  A ++FR + R  + A+ + Y  +IH        ++A  
Sbjct: 366 PLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALS 425

Query: 362 LFLDMEAK 369
           L  +M+ K
Sbjct: 426 LLSEMKDK 433



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 102/193 (52%), Gaps = 6/193 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  K+   G  PN+ TY  L++GLC+ G    A++ F +M     + G+  +PN  
Sbjct: 492 EAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMV----DLGL--EPNVQ 545

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++DGLCK G +DKA  L  +M D+ ++ + V   SL+ G     +  +A  L  +M
Sbjct: 546 AYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKM 605

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+Q ++  +   +   C    + EA  +L  MI+ G+ P+A VYN L++     G +
Sbjct: 606 INSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNM 665

Query: 182 NRAEELFVSMESM 194
             A  L   MES+
Sbjct: 666 EEAAILQNEMESL 678


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 189/354 (53%), Gaps = 11/354 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC+P+V TY  L+  +C++     A+N+ +EM A G       C PN VTY  II+G+C+
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKG-------CTPNIVTYNVIINGMCR 234

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG VD AKE+  ++      P++V+Y +++ G C A  W++ K LF EM+D+   PN V+
Sbjct: 235 EGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVT 294

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F++++   C+ G ++ A ++L+ M Q G  PN  + N +++  C  GRV+ A +   +M 
Sbjct: 295 FDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMG 354

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC  +  SY+ ++ G C+    E A  L  EM+ K   P+ V +NT    L +   +E
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A KL + M  +G +     Y   + G C  G +  A+ELF     L  E +   Y  L+
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNN---LPCEPNTITYTTLL 471

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            GLC + RL  A EL   + +     + VT+N+++   C  G +++A +L   M
Sbjct: 472 TGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 525



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 183/367 (49%), Gaps = 9/367 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++   GC PN    N +IN +C+ G    A +    M    G +G  C P+T++
Sbjct: 311 AIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM----GMYG--CNPDTIS 364

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++ GLC+ G  + AKEL  +M  +N  PN VT+N+ I   C      +A  L   M 
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMP 424

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G    +V++N +++  C  G++D A   LEL   +   PN   Y TL+ G C   R++
Sbjct: 425 EYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYTTLLTGLCHAERLD 481

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M    C  N  ++++L++ +C+   +E A+ L ++M+  G  P+++ +NTL 
Sbjct: 482 AAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLL 541

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+ +    E A +L   +   GV+ DT  Y + +D L +     EA+++   ++ +   
Sbjct: 542 DGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMR 601

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  YN ++  LCK      A + F  +     + +  TY I+I  L  +G + +AR +
Sbjct: 602 PKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYV 661

Query: 363 FLDMEAK 369
             ++ AK
Sbjct: 662 LSELYAK 668



 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 175/368 (47%), Gaps = 9/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++R  GC PN+ TYN +ING+CR G    A    +E+ N    +G   +P+ V
Sbjct: 205 EAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA----KEILNRLSSYGF--QPDIV 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YTT++ GLC     D  K LF +M D+   PN VT++ L+  FC       A  +  +M
Sbjct: 259 SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN    N+++N +CK G++D+A   L  M   G  P+   Y T++ G C  GR 
Sbjct: 319 SQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRW 378

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+EL   M    C  N  +++  I   C+   IE A+ L   M   G    +V YN L
Sbjct: 379 EHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNAL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +V+ A +LF+ +       +T  Y T + GLC    +  A EL   +     
Sbjct: 439 VHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDC 495

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L+   +N L+   C+ G ++ A EL   +       +++T+N ++  +  D   ++A +
Sbjct: 496 PLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALE 555

Query: 362 LFLDMEAK 369
           L   + +K
Sbjct: 556 LLHGLVSK 563



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 144/319 (45%), Gaps = 38/319 (11%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M      P+VVTY  L+   C ++ + EA  +  EM  +G  PN+V++NVI+N +C+ G+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDG------------------------------- 174
           +D+A  +L  +   G +P+   Y T++ G                               
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297

Query: 175 ----FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
               FC  G V RA ++   M   GC  N    +I+IN  CK   ++ A    + M   G
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 357

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             PD + Y T+  GL    + E A +L  EM R     +   + TFI  LC+ G I +A+
Sbjct: 358 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 417

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           +L   +      + I  YN L+ G C  GR+  A ELF +LP      + +TY  ++  L
Sbjct: 418 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLTGL 474

Query: 351 CADGKMDKARDLFLDMEAK 369
           C   ++D A +L  +M  K
Sbjct: 475 CHAERLDAAAELLAEMIQK 493



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 135/269 (50%), Gaps = 9/269 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +  +GC   + TYN L++G C  G    AL LF  +          C+PNT+
Sbjct: 415 QAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---------CEPNTI 465

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ GLC    +D A EL  +M  ++   N VT+N L+  FC      EA  L  +M
Sbjct: 466 TYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 525

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN+++FN +++ + K+   +EA  LL  ++  GV  +   Y++++D      R 
Sbjct: 526 MEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRT 585

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++  +++ MG +  V  Y+ ++   CK  E + A+  ++ M+S G  P+   Y  L
Sbjct: 586 EEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIIL 645

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             GL     ++ A  +  E+   GV + +
Sbjct: 646 IEGLAHEGLLKEARYVLSELYAKGVLSKS 674



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 90/177 (50%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           +M   GC+ +V +Y++L+   CK+     A+++  EM +KG  P++V YN +  G+    
Sbjct: 177 TMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 236

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V+ A ++ + +  +G   D  +Y T + GLC      +   LF  +   K   +   ++
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            L+   C+ G ++ A ++ + + +     +    NI+I+A+C  G++D A D   +M
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 353



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 72/159 (45%)

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G     E     S  S ML +G +P VV Y  L   + +      A  + DEM+  G  
Sbjct: 160 SGASATAEGSATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCT 219

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +   Y   I+G+C+ G + +A E+   L    ++ DI +Y  ++ GLC + R      L
Sbjct: 220 PNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVL 279

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           F  +     + + VT+++++   C  G +++A  +   M
Sbjct: 280 FAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQM 318


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 188/364 (51%), Gaps = 7/364 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F K    G  PN+  +++LINGLC+ G    A  + EEM           KPN  T+T +
Sbjct: 286 FKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGW------KPNVYTHTAL 339

Query: 67  IDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           IDGLCK+G+ +KA  LFLK+ + +N  PNV TY  +I+G+C     N A+ L I M +QG
Sbjct: 340 IDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQG 399

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PN  ++  +++  CK G    A  L++LM + G  PN F YN ++DG C  GR   A 
Sbjct: 400 LVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAY 459

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L       G   +  +Y+ILI+ +C+  + + AL+++S M   G++PD+  YN L    
Sbjct: 460 KLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATF 519

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +VE + KLF+E    G+      Y + I G C++G+I  A++ F  +R    + D 
Sbjct: 520 CRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDS 579

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  LI GLC   +L  A +L+ ++    L    VT   + +  C  G    A  +   
Sbjct: 580 ITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAMIILER 639

Query: 366 MEAK 369
           +E K
Sbjct: 640 LEKK 643



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 170/343 (49%), Gaps = 7/343 (2%)

Query: 25  LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
           ++      G    A+N+  EM N     G+V K   + +  +ID     GFVD A+++F 
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQN----HGLVLKARILNF--VIDVALALGFVDYAEKVFD 217

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
           +M D  + P+  +Y  ++ G+C     ++      +M+++G   +  +  ++++   + G
Sbjct: 218 EMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKG 277

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            ++ A    +  +Q+G+ PN   +++L++G C  G + +A E+   M   G K NV++++
Sbjct: 278 FVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHT 337

Query: 205 ILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
            LI+G CK    E A  L+ +++ S   KP+V  Y  +  G  +  ++ RA  L   M+ 
Sbjct: 338 ALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKE 397

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+  +T  Y   IDG CK G    A EL   +    +  +I  YN +IDGLCK GR   
Sbjct: 398 QGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPE 457

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A++L R   +  L AD VTY I+I   C      +A  +F  M
Sbjct: 458 AYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRM 500



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 162/361 (44%), Gaps = 44/361 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L ++++  G  PN  TY  LI+G C+ G+   A  L + M    G+ G    PN  
Sbjct: 387 RAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLM----GKEGFT--PNIF 440

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  IIDGLCK+G   +A +L  +     ++ + VTY  LI  FC   D  +A  +F  M
Sbjct: 441 TYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRM 500

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+QP++ ++NV++   C+  K++E+ +L E  + +G+ P    Y +++ G+C  G +
Sbjct: 501 FKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHI 560

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A + F  M   GCK +  +Y  LI+G C   +++ A  LY  M+  G+ P        
Sbjct: 561 SSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSP-------- 612

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E+ +V  A++                        CK G    A+ +   L  L+ 
Sbjct: 613 ----CEVTRVTLAYE-----------------------YCKQGDSATAMII---LERLEK 642

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L IR  N LI  LC   ++ +A   F  L    L  D +T      A     K     D
Sbjct: 643 KLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVSD 702

Query: 362 L 362
           L
Sbjct: 703 L 703



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/285 (23%), Positives = 140/285 (49%), Gaps = 2/285 (0%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           + ++N++        ++  F       EA  + IEM + G+       N +++     G 
Sbjct: 149 LNNDNLDRATEVMQCMVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGF 208

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D A ++ + M+   V P++  Y  ++ G+C  GR++  +     M   G   +  + ++
Sbjct: 209 VDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTL 268

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+ + +   +  A   + + +  G+ P+++ +++L  GL +I  +++AF++ +EM R G
Sbjct: 269 MISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKG 328

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
              + + +   IDGLCK G+  +A  LF + +R   Y+ ++  Y C+I+G CK  +L  A
Sbjct: 329 WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRA 388

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L   +    L+ +  TY  +I   C  G   +A +L +D+  K
Sbjct: 389 EMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYEL-MDLMGK 432



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 107/231 (46%), Gaps = 12/231 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+F ++   G +P++ TYN LI   CR      +  LFEE        G+   P   
Sbjct: 492 QALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAV------GLGLLPTKE 545

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I G C++G +  A + F KM+D    P+ +TY +LI G C  +  +EA  L+  M
Sbjct: 546 TYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETM 605

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE-LMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +D G+ P  V+   +  E CK G    A  +LE L  ++ +R      NTL+   C   +
Sbjct: 606 IDNGLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLWIR----TVNTLIRKLCSEKK 661

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           V  A   F  +       +  + +      C        +S  SE +SKGI
Sbjct: 662 VGVAALFFHKLLDKDLNVDRITLAAFTTA-CYESNKFALVSDLSERISKGI 711


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 202/365 (55%), Gaps = 8/365 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF+++R  G  P+V TYN+LI+G  + G      +LF EM +      V C P+ +TY  
Sbjct: 311 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD------VGCVPDIITYNG 364

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+  CK   + +A E F +MK+  + PNVVTY++LI  FC       A  LF++M   G
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PN  ++  +++  CK G + EA +LL  M+Q GV+ N   Y  L+DG C  GR+  AE
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F SM   G   N   Y+ L++GY K + +E A+ +  +M    IKPD+++Y ++  G 
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 544

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               ++E    + +EM+  G++A+     T ID   K G   +A+  F+ ++ +  E  I
Sbjct: 545 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 604

Query: 306 RAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             Y  LIDGLCK+G +++A + F R L  G L  +V  Y  +I  LC +  ++ A+ LF 
Sbjct: 605 VTYCVLIDGLCKAGIVELAVDYFCRMLSLG-LQPNVAVYTSLIDGLCKNNCIESAKKLFD 663

Query: 365 DMEAK 369
           +M+ +
Sbjct: 664 EMQCR 668



 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 187/358 (52%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E A+LF +++  GC P++ TYN LIN  C+      A   F EM N NG      KPN V
Sbjct: 342 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN-NG-----LKPNVV 395

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+ID  CKEG +  A +LF+ M+   + PN  TY SLI   C A +  EA  L  +M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+ N+V++  +++ LCK G+M EA  +   M++ G+ PN  VY  L+ G+    R+
Sbjct: 456 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 515

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M     K ++  Y  +I G+C  +++E    +  EM S+GI  + VI  T+
Sbjct: 516 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 575

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               F+  +   A   F EMQ  GV A    Y   IDGLCK G +  AV+ F  +  L  
Sbjct: 576 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGL 635

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + ++  Y  LIDGLCK+  ++ A +LF  +    +  D+  +  +I      G + +A
Sbjct: 636 QPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 693



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF+ +R  G  PN FTY +LI+  C+ G+   A  L  +M       GV  K N VT
Sbjct: 413 AIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVT 466

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT ++DGLCK G + +A+E+F  M  + I+PN   Y +L+HG+  A    +A  +  +M 
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  ++P+++ +  I+   C   K++E   +LE M   G+  N  +  T++D +   G+ +
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A   F  M+ +G +  + +Y +LI+G CK   +E A+  +  MLS G++P+V +Y +L 
Sbjct: 587 DALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 646

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL + + +E A KLFDEMQ  G+  D  A+   IDG  K+G + EA+ L   +  L  E
Sbjct: 647 DGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 706

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y  L+ G  + G L  A + F  +    ++ + V    ++      G++D+A +L
Sbjct: 707 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766

Query: 363 FLDME 367
             +ME
Sbjct: 767 KNEME 771



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 185/366 (50%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F ++R F   P   + N L++ L ++G+  +    F +M       G    P+  
Sbjct: 237 EANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM------IGAGIAPSVF 290

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LCKEG ++ ++ LF++M++  ++P+VVTYNSLI G+       E   LF EM
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G  P+++++N ++N  CK  KM  A      M   G++PN   Y+TL+D FC  G +
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 410

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LFV M   G   N F+Y+ LI+  CK   +  A  L ++ML  G+K ++V Y  L
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++  A ++F  M + G++ +   Y   + G  K   + +A+++ + +     
Sbjct: 471 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 530

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y  +I G C   +L+    +   +    + A+ V    +I A    GK   A +
Sbjct: 531 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 590

Query: 362 LFLDME 367
            F +M+
Sbjct: 591 FFQEMQ 596



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 170/312 (54%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           +C   +  +  +     + G +++A E F +M++    P   + N L+H    + +    
Sbjct: 214 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 273

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           +  F +M+  G+ P+V ++NV+++ LCK G ++ + RL   M ++G+ P+   YN+L+DG
Sbjct: 274 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 333

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +   G +     LF  M+ +GC  ++ +Y+ LIN YCK +++  A   +SEM + G+KP+
Sbjct: 334 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 393

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+TL     +   ++ A KLF +M+R G+  + + Y + ID  CK G + EA +L  
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +     +L+I  Y  L+DGLCK+GR+  A E+FRS+ +  +  +   Y  ++H      
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513

Query: 355 KMDKARDLFLDM 366
           +M+ A  +   M
Sbjct: 514 RMEDAMKILKQM 525



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 146/305 (47%), Gaps = 41/305 (13%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F  +   G  PN   Y  L++G  +      A+ + ++M   N       KP+ 
Sbjct: 481 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN------IKPDL 534

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y +II G C +  +++ K +  +MK   I+ N V   ++I  +  A   ++A   F E
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 594

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D GV+  +V++ V+++ LCK G ++ A      M+ +G++PN  VY +L+DG C    
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------------------ 222
           +  A++LF  M+  G   ++ +++ LI+G  K+  ++ AL L                  
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 714

Query: 223 -----------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                            ++EM+ KGI P+ V+   L    ++  Q++ A +L +EM+R G
Sbjct: 715 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMERMG 774

Query: 266 VAADT 270
           +  ++
Sbjct: 775 LITES 779


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 200/368 (54%), Gaps = 7/368 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +++  G  P+  TYN++I+G  + G     +  FEEM +      + C+P+ +T
Sbjct: 149 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVIT 202

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+  CK G +    E + +MK   + PNVV+Y++L+  FC      +A   +++M 
Sbjct: 203 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 262

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  ++  +++  CK G + +A RL   M+Q+GV  N   Y  L+DG C   R+ 
Sbjct: 263 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 322

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEELF  M++ G   N+ SY+ LI+G+ K K ++ AL L +E+  +GIKPD+++Y T  
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 382

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL  + ++E A  + +EM+  G+ A++  Y T +D   K+G   E + L   ++ L  E
Sbjct: 383 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 442

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARD 361
           + +  +  LIDGLCK+  +  A + F  +     L A+   +  MI  LC D +++ A  
Sbjct: 443 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 502

Query: 362 LFLDMEAK 369
           LF  M  K
Sbjct: 503 LFEQMVQK 510



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 179/331 (54%), Gaps = 7/331 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   ++ +R  G  PN +TY +LI+  C+ G+   A  L  EM     E+      N V
Sbjct: 253 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW------NVV 306

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDGLC    + +A+ELF KM    + PN+ +YN+LIHGF  A + + A  L  E+
Sbjct: 307 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 366

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+++ +   +  LC   K++ A  ++  M + G++ N+ +Y TLMD +  +G  
Sbjct: 367 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 426

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
                L   M+ +  +  V ++ +LI+G CKNK +  A+  ++ + +  G++ +  I+  
Sbjct: 427 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 486

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL + +QVE A  LF++M + G+  D  AY + +DG  K G ++EA+ L   +  + 
Sbjct: 487 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 546

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            +LD+ AY  L+ GL    +L+ A      +
Sbjct: 547 MKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 577



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 169/315 (53%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VC P    +  +   L   G +++A + F KMK   + P   + N L+H F      ++ 
Sbjct: 55  VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 114

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           K  F +M+  G +P V ++N++++ +CK G ++ A  L E M   G+ P+   YN+++DG
Sbjct: 115 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 174

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           F   GR++     F  M+ M C+ +V +Y+ LIN +CK  ++   L  Y EM   G+KP+
Sbjct: 175 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 234

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+TL     +   +++A K + +M+R G+  + + Y + ID  CK G + +A  L  
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++  Y  LIDGLC + R+K A ELF  +    +I ++ +YN +IH      
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 355 KMDKARDLFLDMEAK 369
            MD+A +L  +++ +
Sbjct: 355 NMDRALELLNELKGR 369



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 9/303 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G  PN+ +YN LI+G  +  +   AL L  E+  G G      KP+ +
Sbjct: 323 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRG-----IKPDLL 376

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T I GLC    ++ AK +  +MK+  I  N + Y +L+  +  + +  E   L  EM
Sbjct: 377 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 436

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +  ++  VV+F V+++ LCKN  + +A      +    G++ NA ++  ++DG C   +
Sbjct: 437 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 496

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  LF  M   G   +  +Y+ L++G  K   +  AL+L  +M   G+K D++ Y +
Sbjct: 497 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 556

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL   +Q+++A    +EM   G+  D     + +    + G I EAVEL   L  +K
Sbjct: 557 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL--MK 614

Query: 301 YEL 303
           ++L
Sbjct: 615 HQL 617


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 207/396 (52%), Gaps = 30/396 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANG------------ 48
           EAA  F  +   G +P++F+Y TL++G    G     + LF  M +NG            
Sbjct: 388 EAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILI 447

Query: 49  --NGEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
               + G+V                P+ VTY+T+I    + G +  A E F +M    I 
Sbjct: 448 HAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQ 507

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV-QPNVVSFNVIMNELCKNGKMDEASR 151
           PN   Y+S+I GFC      +AK L  EM+++G+ +P++V F+ ++N LCK+G++ +A  
Sbjct: 508 PNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHD 567

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           + +L   IG RP    +N+L+DG+CL G++++A ++  +ME +G + ++ +Y+ L++GY 
Sbjct: 568 IFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYF 627

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN  I   L+L+ EM  KG+KP+ V Y  +  GLF   +   A K F EM   G      
Sbjct: 628 KNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVS 687

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   + GLC+N    EA+ LF+ L  +  +  I   N +I+ + K  R + A ELF ++
Sbjct: 688 IYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATI 747

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
               L+ +  TY +MI  L  DG ++ A ++F  ME
Sbjct: 748 SASGLLPNESTYGVMIINLLKDGGVEDANNMFSSME 783



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/356 (34%), Positives = 191/356 (53%), Gaps = 9/356 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            C P+V  Y+T+I+G    G T  A +LF EM       GV  KP+ VTY  IID LCK 
Sbjct: 260 ACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQ----GV--KPDVVTYNLIIDALCKA 313

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +DKA+ +  +M  +   P+ VTY+ +IHG+       EA  +F EM  +G+ PN+V+ 
Sbjct: 314 RAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTC 373

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  +  LCK+G+  EA+   + M   G +P+ F Y TL+ G+   G       LF SM+S
Sbjct: 374 NSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKS 433

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N   ++ILI+ Y K   ++ A+ +++EM  +G+ PDVV Y+T+      + ++  
Sbjct: 434 NGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTD 493

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK--YELDIRAYNCL 311
           A + F++M   G+  +T  Y + I G C +G +V+A EL   + I K     DI  ++ +
Sbjct: 494 AMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEM-INKGIPRPDIVFFSSV 552

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           I+ LCK GR+  A ++F           V+T+N +I   C  GKMDKA  +   ME
Sbjct: 553 INSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAME 608



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 184/359 (51%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC PN  +Y+ ++  LC    +  AL+L + MA   G     C P+ V Y+T
Sbjct: 215 LLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGG----ACSPDVVAYST 270

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G   EG   KA  LF +M  + + P+VVTYN +I   C A   ++A+ +  +M   G
Sbjct: 271 VIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDG 330

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            QP+ V+++ +++     G++ EA+++   M + G+ PN    N+ +   C  GR   A 
Sbjct: 331 AQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAA 390

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E F SM + G K ++FSY  L++GY         + L++ M S GI  +  ++  L    
Sbjct: 391 EFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAY 450

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   V+ A  +F EMQ+ GV+ D   Y T I    + G + +A+E F  +     + + 
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNT 510

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y+ +I G C  G L  A EL   +  +G+   D+V ++ +I++LC DG++  A D+F
Sbjct: 511 AVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 169/344 (49%), Gaps = 6/344 (1%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGV-VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 88
           C T    +AL LF  +     E G  V  P   TY  ++D  C+    D    LF  +  
Sbjct: 128 CITDGPALALALFNRVCRE--EAGTQVAVPTFCTYNILMDCCCRARRPDLGLALFGCILR 185

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMD 147
             +  + +T N+L+   CYAN   EA  + +  M + G  PN VS+++++  LC N    
Sbjct: 186 TGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQ 245

Query: 148 EASRLLELMIQIG--VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            A  LL++M + G    P+   Y+T++ GF   G   +A  LF  M   G K +V +Y++
Sbjct: 246 RALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNL 305

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+  CK + ++ A  +  +M + G +PD V Y+ +  G   + +++ A K+F EM++ G
Sbjct: 306 IIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRG 365

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +     +F+  LCK+G   EA E F ++    ++ DI +Y  L+ G    G      
Sbjct: 366 LIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMI 425

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LF S+    + A+   + I+IHA    G +D A  +F +M+ +
Sbjct: 426 GLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQ 469



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 164/356 (46%), Gaps = 9/356 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P   TYN L++  CR     + L LF  +           K + +T  T++  LC     
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTG------LKMDQITANTLLKCLCYANRT 208

Query: 77  DKAKELFL-KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG--VQPNVVSF 133
           ++A  + L +M +    PN V+Y+ ++   C  +    A  L   M  QG    P+VV++
Sbjct: 209 EEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAY 268

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + +++     G+  +A  L   M + GV+P+   YN ++D  C    +++AE +   M +
Sbjct: 269 STVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTT 328

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + +  +YS +I+GY     ++ A  ++ EM  +G+ P++V  N+    L +  + + 
Sbjct: 329 DGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKE 388

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A + FD M   G   D ++Y T + G    G   + + LF +++      +   +  LI 
Sbjct: 389 AAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIH 448

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              K G +  A  +F  + +  +  DVVTY+ +I      G++  A + F  M A+
Sbjct: 449 AYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 143/277 (51%), Gaps = 12/277 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P++  ++++IN LC+ G  + A ++F+ +A   GE     +P  +T+ ++IDG C  G 
Sbjct: 543 RPDIVFFSSVINSLCKDGRVMDAHDIFD-LATDIGE-----RPGVITFNSLIDGYCLVGK 596

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +DKA ++   M+   + P++VTYN+L+ G+      N+   LF EM  +GV+PN V++ +
Sbjct: 597 MDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGI 656

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  L + G+   A +    MI+ G      +Y  ++ G C   R N A+E  +  + +G
Sbjct: 657 MLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC---RNNCADEAIILFQKLG 713

Query: 196 CKHNVFSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             +  FS +IL   IN   K +  E A  L++ + + G+ P+   Y  + I L +   VE
Sbjct: 714 TMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVE 773

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            A  +F  M++ G+   +      I  L + G I +A
Sbjct: 774 DANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 125/254 (49%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +F      G  P V T+N+LI+G C  G    A  + + M        V  +P+ 
Sbjct: 563 MDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV------VGVEPDI 616

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++DG  K G ++    LF +M+ + + PN VTY  ++ G   A     A+  F E
Sbjct: 617 VTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G    V  + +I+  LC+N   DEA  L + +  + V+ +  + NT+++      R
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A+ELF ++ + G   N  +Y ++I    K+  +E A +++S M   GI P   + N 
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNR 796

Query: 241 LFIGLFEIHQVERA 254
           +   L E  ++ +A
Sbjct: 797 IIRMLLEKGEIAKA 810



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 29/178 (16%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------FGVVC 56
           LF +++  G +PN  TY  ++ GL R G T+ A   F EM                G +C
Sbjct: 638 LFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLC 697

Query: 57  KPN-------------------TVT-YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           + N                   ++T   T+I+ + K    ++AKELF  +    + PN  
Sbjct: 698 RNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNES 757

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           TY  +I          +A  +F  M   G+ P     N I+  L + G++ +A   L 
Sbjct: 758 TYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLS 815


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/354 (34%), Positives = 184/354 (51%), Gaps = 9/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYN LI+G C+TG    AL L + M+           P+ VTY TI+  LC  
Sbjct: 175 GAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---------VSPDVVTYNTILRTLCDS 225

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A E+  +       P+V+TY  LI   C  +   +A  L  EM D+G +P+VV++
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           NV++N +CK G++DEA R L  M   G +PN   +N ++   C TGR   AE+    M  
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V +++ILIN  C+   I  A+ +  +M   G  P+ + YN L   L +  ++ER
Sbjct: 346 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +  D M   G   D   Y T +  LCK+G +  AVE+   L        +  YN +ID
Sbjct: 406 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 465

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GL K G+   A +L   +    L  D++TY+ ++  L  +GK+D+A   F D+E
Sbjct: 466 GLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLE 519



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/336 (32%), Positives = 177/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  GC+P+V TYN LING+C+ G    A+     M +    +G  C+PN +
Sbjct: 265 QAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPS----YG--CQPNVI 318

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  I+  +C  G    A++   +M  +  +P+VVT+N LI+  C       A  +  +M
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N +++ LCK+ KM+ A   L++M+  G  P+   YNTL+   C  G+V
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+   + S GC   + +Y+ +I+G  K  + + A+ L  EM  KG+KPD++ Y+TL
Sbjct: 439 DVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTL 498

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +V+ A   F +++  GV  +   Y + + GLCK    V A++    +     
Sbjct: 499 VGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGC 558

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
           +    +Y  LI+GL   G  K A EL   L  RGV+
Sbjct: 559 KPTETSYMILIEGLAYEGLAKEALELLNELCSRGVV 594



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 145/277 (52%), Gaps = 6/277 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A     ++   GC P+V T+N LIN LCR G    A+++ E+M          C PN+
Sbjct: 334 MDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG------CTPNS 387

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++  LCK+  +++A E    M      P++VTYN+L+   C     + A  +  +
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK D+A +LL+ M   G++P+   Y+TL+ G    G+
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A   F  +E MG K N  +Y+ ++ G CK ++   A+   + M+++G KP    Y  
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L  GL      + A +L +E+   GV   + A +  +
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 73/239 (30%), Positives = 122/239 (51%), Gaps = 3/239 (1%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V  N  +  L +NG+++E  + LE M+  G  P+     +L+ G C TG+  +A  +   
Sbjct: 111 VENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEI 170

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           +E  G   +V +Y++LI+GYCK  EI  AL L   M    + PDVV YNT+   L +  +
Sbjct: 171 LEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGK 227

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ A ++ D   +     D   Y   I+  CK   + +A++L   +R    + D+  YN 
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNV 287

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI+G+CK GRL  A      +P      +V+T+NI++ ++C+ G+   A     +M  K
Sbjct: 288 LINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 127/247 (51%), Gaps = 3/247 (1%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+ +G  P++++   ++  LCK GK  +A+R++E++   G  P+   YN L+ G+C TG
Sbjct: 135 DMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTG 194

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A +L   ++ M    +V +Y+ ++   C + +++ A+ +    + +   PDV+ Y 
Sbjct: 195 EIGSALQL---LDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYT 251

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L     +   V +A KL DEM+  G   D   Y   I+G+CK G + EA+     +   
Sbjct: 252 ILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSY 311

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + ++  +N ++  +C +GR   A +    + R      VVT+NI+I+ LC  G + +A
Sbjct: 312 GCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRA 371

Query: 360 RDLFLDM 366
            D+   M
Sbjct: 372 IDVLEKM 378


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/397 (34%), Positives = 204/397 (51%), Gaps = 50/397 (12%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           KL   G   +  +Y TLING+C+ G T  A+ L   +       G + +PN V Y TIID
Sbjct: 158 KLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRID------GRLTEPNVVMYNTIID 211

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK   V +A  LF +M  + I+ NVVTY+++IHGFC      EA     EM+ + + P
Sbjct: 212 CLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINP 271

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +V  +N +++ L K GK+ EA  +L ++++  ++PN   YNTL+DG+        A+ +F
Sbjct: 272 DVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGY--------AKHVF 323

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            ++  MG   +V+SY+I+IN  CK K +E AL+LY EM  K + P+ V YN+L  GL + 
Sbjct: 324 NAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKS 383

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR------------TL 296
            ++  A+ L DEM   G  A+   Y + I+GLCKNG + +A+ L              TL
Sbjct: 384 GRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTL 443

Query: 297 RIL------------------------KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            IL                         Y  ++  YN +I G CK G L  A+ L   + 
Sbjct: 444 NILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKME 503

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                 + +T+ I+I AL   G+ DKA  L  +M A+
Sbjct: 504 DSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIAR 540



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 195/369 (52%), Gaps = 17/369 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A ++  K+  +G +P+  T  TLI GLC  G    AL+  +++ A G        + + V
Sbjct: 117 AFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG-------FRLDQV 169

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I+G+CK G    A +L  ++      PNVV YN++I   C     +EA  LF EM
Sbjct: 170 SYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEM 229

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  NVV+++ I++  C  GK+ EA   L  M+   + P+ ++YNTL+D     G+V
Sbjct: 230 SVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKV 289

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ +   +     K NV +Y+ LI+GY K+        +++ +   G+ PDV  YN +
Sbjct: 290 KEAKNVLAVIVKTCLKPNVITYNTLIDGYAKH--------VFNAVGLMGVTPDVWSYNIM 341

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +I +VE A  L+ EM +  +  +T  Y + IDGLCK+G I  A +L   +    +
Sbjct: 342 INRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGH 401

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK-MDKAR 360
             ++  YN LI+GLCK+G+L  A  L   +    +  D+ T NI++H L   GK +  A+
Sbjct: 402 HANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQ 461

Query: 361 DLFLDMEAK 369
            LF D+  K
Sbjct: 462 GLFQDLLDK 470



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 187/395 (47%), Gaps = 37/395 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGH--TIVALNLFEEMANGNGEFGVVCKPN 59
           +A   F ++      P +  +N +++   +  H  T+V+L+   E+           +P+
Sbjct: 46  DALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELK--------AIQPD 97

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T   +I+  C  G ++ A  +  K+      P+ VT  +LI G C      +A     
Sbjct: 98  FFTLNILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHD 157

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +++ QG + + VS+  ++N +CK G+   A +LL  +      PN  +YNT++D  C   
Sbjct: 158 KLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRK 217

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V+ A  LF  M   G   NV +YS +I+G+C   ++  AL   +EM+ K I PDV IYN
Sbjct: 218 LVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYN 277

Query: 240 TLFIGLFEIHQVERAFK-------------------LFDEMQRH--------GVAADTWA 272
           TL   L +  +V+ A                     L D   +H        GV  D W+
Sbjct: 278 TLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWS 337

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+ LCK   + EA+ L++ +       +   YN LIDGLCKSGR+  AW+L   + 
Sbjct: 338 YNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMH 397

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                A+V+TYN +I+ LC +G++DKA  L   M+
Sbjct: 398 DRGHHANVITYNSLINGLCKNGQLDKAIALINKMK 432



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 140/293 (47%), Gaps = 5/293 (1%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A   F +M      P ++ +N ++  F     +     L   +  + +QP+  + N+
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C  G+++ A  +L  +++ G +P+     TL+ G CL G+V +A      + + G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +  SY  LING CK  E   A+ L   +  +  +P+VV+YNT+   L +   V  A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++A+   Y   I G C  G + EA+     + +     D+  YN L+D L
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDAL 283

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMI-----HALCADGKMDKARDLF 363
            K G++K A  +   + +  L  +V+TYN +I     H   A G M    D++
Sbjct: 284 HKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVW 336



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 108/224 (48%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A      M+ +   P    +N ++D F           L   +E    + + F+ +I
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LIN +C   +I  A S+ S++L  G +PD V   TL  GL    QV++A    D++   G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D  +Y T I+G+CK G    A++L R +     E ++  YN +ID LCK   +  A 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LF  +    + A+VVTY+ +IH  C  GK+ +A     +M  K
Sbjct: 224 NLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLK 267



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/156 (20%), Positives = 60/156 (38%)

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + ++ AL  +  ML     P ++ +N +     ++        L   ++   +  D +  
Sbjct: 42  ENVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTL 101

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I+  C  G I  A  +   +    Y+ D      LI GLC  G++K A      L  
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                D V+Y  +I+ +C  G+   A  L   ++ +
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGR 197


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 198/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++  +  FG +P + TYNTL++  C+ G     L+L  EM          C PN V
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDV 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GL K+G  ++AK L  +M    +  +  TYN LI+G+       EA  L  EM
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P V ++N  +  LCK G+M +A + L  M+   + P+   YNTL+ G+C  G +
Sbjct: 331 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  + S+     + +Y+ L++G C+  E+E A  L  EM+++GI PD+V Y  L
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  +  A + FDEM   G+  D++AY T I G  K G    A  L   +    +
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN ++DGLCK G L+ A EL + +    +I D VTY  +IHA   +G++ K R+
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 362 LFLDMEAK 369
           +F +M +K
Sbjct: 571 IFYEMLSK 578



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G + + +TYN LI G    G    AL+L EEM            P   
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGAS------PTVA 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY + I GLCK G +  A +    M   N+ P+VV+YN+LI+G+C   +  +A  LF E+
Sbjct: 341 TYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P +V++N +++ LC+ G+++ A +L   MI  G+ P+   Y  L++G C  G +
Sbjct: 401 RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSL 460

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+E F  M   G + + ++Y+  I G  K  +   A SL  EML+KG  PD++IYN +
Sbjct: 461 SMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVV 520

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++  +E A +L  +M   GV  D   Y + I    +NG + +  E+F  +     
Sbjct: 521 VDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL 580

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  Y  LI G    GRL+ A+  F  +    ++ +V+TYN +I+ LC   +MD+A +
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640

Query: 362 LFLDMEAK 369
            F +M  K
Sbjct: 641 FFAEMVEK 648



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/327 (33%), Positives = 178/327 (54%), Gaps = 6/327 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  LF +LR     P + TYNTL++GLCR G   VA  L  EM N          P+ 
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG------IAPDI 444

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +++G CK G +  A+E F +M  E +  +   Y + I G     D + A  L  E
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  P+++ +NV+++ LCK G ++EAS LL+ M+  GV P+   Y +++      GR
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +  E+F  M S G   +V +Y++LI+G+     +E A   +SEM  KGI P+V+ YN+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++ ++++A+  F EM   G+  + ++Y   I+  C  G   EA+ L++ +    
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWEL 327
            + D   ++ L+  L K  +L+   +L
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQAVRQL 711



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 183/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  ++ + G  P V TYN+ I GLC+ G    A+    +M   N        P+ V
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN------LLPDVV 375

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I G C+ G + KA  LF +++   + P +VTYN+L+ G C   +   A+ L +EM
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P++V++ +++N  CK G +  A    + M+  G+  +++ Y T + G    G  
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  L   M + G   ++  Y+++++G CK   +E A  L  +M+S G+ PD V Y ++
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E  ++ +  ++F EM   G+      Y   I G    G +  A   F  ++    
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  YN LI+GLCK  R+  A+  F  +    +  +  +Y I+I+  C  G   +A  
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675

Query: 362 LFLDM 366
           L+  M
Sbjct: 676 LYKQM 680



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 114/211 (54%), Gaps = 6/211 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P++  YN +++GLC+ G+   A  L ++M +     GV+  P+ VTYT+II    + 
Sbjct: 509 GFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSD----GVI--PDYVTYTSIIHAHLEN 562

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + K +E+F +M  + + P+VVTY  LIHG         A   F EM ++G+ PNV+++
Sbjct: 563 GRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITY 622

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LCK  +MD+A      M++ G+ PN + Y  L++  C  G    A  L+  M  
Sbjct: 623 NSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLD 682

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            G + +  ++S L+    K+ +++    L S
Sbjct: 683 RGVQPDSCTHSALLKQLGKDCKLQAVRQLES 713



 Score = 91.3 bits (225), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 87/152 (57%), Gaps = 7/152 (4%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F ++   G  P+V TY  LI+G    G    A   F EM     E G++  PN +TY +
Sbjct: 571 IFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQ----EKGIL--PNVITYNS 624

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+GLCK   +D+A   F +M ++ I PN  +Y  LI+  C   +W EA  L+ +M+D+G
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           VQP+  + + ++ +L K+ K+ +A R LE ++
Sbjct: 685 VQPDSCTHSALLKQLGKDCKL-QAVRQLESLL 715



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 3/178 (1%)

Query: 195 GCKHNVFSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           GC  +  S  IL   I  Y K   +E  LS++ +M+   + PDV   N +   L +   +
Sbjct: 156 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 215

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            +A +++  M   G+      Y T +D  CK G + + ++L   ++      +   YN L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           I+GL K G  + A  L   + +  L     TYN +I+     G + +A  L  +M  K
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 198/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++  +  FG +P + TYNTL++  C+ G     L+L  EM          C PN V
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDV 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GL K+G  ++AK L  +M    +  +  TYN LI+G+       EA  L  EM
Sbjct: 271 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P V ++N  +  LCK G+M +A + L  M+   + P+   YNTL+ G+C  G +
Sbjct: 331 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  + S+     + +Y+ L++G C+  E+E A  L  EM+++GI PD+V Y  L
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  +  A + FDEM   G+  D++AY T I G  K G    A  L   +    +
Sbjct: 451 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 510

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN ++DGLCK G L+ A EL + +    +I D VTY  +IHA   +G++ K R+
Sbjct: 511 PPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGRE 570

Query: 362 LFLDMEAK 369
           +F +M +K
Sbjct: 571 IFYEMLSK 578



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G + + +TYN LI G    G    AL+L EEM            P   
Sbjct: 287 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG------ASPTVA 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY + I GLCK G +  A +    M   N+ P+VV+YN+LI+G+C   +  +A  LF E+
Sbjct: 341 TYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 400

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P +V++N +++ LC+ G+++ A +L   MI  G+ P+   Y  L++G C  G +
Sbjct: 401 RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSL 460

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+E F  M   G + + ++Y+  I G  K  +   A SL  EML+KG  PD++IYN +
Sbjct: 461 SMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVV 520

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++  +E A +L  +M   GV  D   Y + I    +NG + +  E+F  +     
Sbjct: 521 VDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGL 580

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  Y  LI G    GRL+ A+  F  +    ++ +V+TYN +I+ LC   +MD+A +
Sbjct: 581 TPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYN 640

Query: 362 LFLDMEAK 369
            F +M  K
Sbjct: 641 FFAEMVEK 648



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/322 (33%), Positives = 176/322 (54%), Gaps = 6/322 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  LF +LR     P + TYNTL++GLCR G   VA  L  EM N          P+ 
Sbjct: 391 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEG------IAPDI 444

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +++G CK G +  A+E F +M  E +  +   Y + I G     D + A  L  E
Sbjct: 445 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 504

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  P+++ +NV+++ LCK G ++EAS LL+ M+  GV P+   Y +++      GR
Sbjct: 505 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGR 564

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +  E+F  M S G   +V +Y++LI+G+     +E A   +SEM  KGI P+V+ YN+
Sbjct: 565 LRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNS 624

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++ ++++A+  F EM   G+  + ++Y   I+  C  G   EA+ L++ +    
Sbjct: 625 LINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRG 684

Query: 301 YELDIRAYNCLIDGLCKSGRLK 322
            + D   ++ L+  L K  +L+
Sbjct: 685 VQPDSCTHSALLKQLGKDCKLQ 706



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 183/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  ++ + G  P V TYN+ I GLC+ G    A+    +M   N        P+ V
Sbjct: 322 EALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANN------LLPDVV 375

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I G C+ G + KA  LF +++   + P +VTYN+L+ G C   +   A+ L +EM
Sbjct: 376 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 435

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P++V++ +++N  CK G +  A    + M+  G+  +++ Y T + G    G  
Sbjct: 436 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 495

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  L   M + G   ++  Y+++++G CK   +E A  L  +M+S G+ PD V Y ++
Sbjct: 496 SRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSI 555

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E  ++ +  ++F EM   G+      Y   I G    G +  A   F  ++    
Sbjct: 556 IHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGI 615

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  YN LI+GLCK  R+  A+  F  +    +  +  +Y I+I+  C  G   +A  
Sbjct: 616 LPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALS 675

Query: 362 LFLDM 366
           L+  M
Sbjct: 676 LYKQM 680



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 3/178 (1%)

Query: 195 GCKHNVFSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           GC  +  S  IL   I  Y K   +E  LS++ +M+   + PDV   N +   L +   +
Sbjct: 156 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 215

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            +A +++  M   G+      Y T +D  CK G + + ++L   ++      +   YN L
Sbjct: 216 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 275

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           I+GL K G  + A  L   + +  L     TYN +I+     G + +A  L  +M  K
Sbjct: 276 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK 333


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/390 (32%), Positives = 195/390 (50%), Gaps = 37/390 (9%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF--GVVCKPNTVTYTTIIDGLC 71
           G   N  +Y  LINGLC  G    A+NL   +     +   G   K N V Y+ +ID LC
Sbjct: 137 GFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLC 196

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           + GFVD+  E + +M    + PN  TY SLI G C    + E   L  EM+ +G+  +V 
Sbjct: 197 RNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVY 256

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
            F V+++ LCKNG + EA  + + M+  G  PN      LM G+CL G V+ A ELF ++
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI 316

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT----------- 240
              G K +V++Y++ I+GYCK   +  A+ ++ EM  +G+ P++V YN+           
Sbjct: 317 GEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEV 376

Query: 241 ------------------------LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                                   L  GL +  ++++A  LF+++   G+  D W+Y   
Sbjct: 377 SGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTIL 436

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I G C +  + EA+ L R + +      I  Y+CLIDGLC+SGR+  AW L   +     
Sbjct: 437 IHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGP 496

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + D +TY+I++ AL     +D+A  LF  M
Sbjct: 497 LPDTITYSILLDALWKKQHLDEAVFLFNQM 526



 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/342 (34%), Positives = 190/342 (55%), Gaps = 6/342 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +V+ +  LI+GLC+ G  + A  +F+EM N   E      PN VT T ++ G C +
Sbjct: 250 GLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYE------PNIVTCTALMGGYCLK 303

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A+ELF  + +     +V TYN  IHG+C      +A  +F EM  +GV PN+V++
Sbjct: 304 GNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTY 363

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK G++  A  +++ M + G+ P+      L+DG C + R+++A  LF  +  
Sbjct: 364 NSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVE 423

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V+SY+ILI+G C ++ +  A++L  +M  K + P +V Y+ L  GL    ++  
Sbjct: 424 SGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISN 483

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A++L +EM   G   DT  Y   +D L K  ++ EAV LF  +     E D+  Y  +ID
Sbjct: 484 AWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMID 543

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           G CKS R+  A  LFR +    L+ D+VTY I+ +A+   G 
Sbjct: 544 GYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGS 585



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 181/357 (50%), Gaps = 9/357 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F ++   G EPN+ T   L+ G C  G+  +A  LF+ +    GE+G   K + 
Sbjct: 272 VEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAI----GEWGF--KRDV 325

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY   I G CK G V  A  +F +M  E + PN+VTYNSLI   C A + + A  +   
Sbjct: 326 WTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKT 385

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P++V+  ++++ LCK+ ++D+A  L   +++ G+ P+ + Y  L+ G C + R
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  L   M       ++ +YS LI+G C++  I  A  L +EM  KG  PD + Y+ 
Sbjct: 446 MGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSI 505

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L++   ++ A  LF++M + G+  D   Y   IDG CK+  I EA+ LFR + +  
Sbjct: 506 LLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKN 565

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              DI  Y  L + + KSG     W+    +        V+ Y   + ALC    +D
Sbjct: 566 LVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKY---LAALCKSEHLD 619



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 163/313 (52%), Gaps = 8/313 (2%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +TV   T++ GLC  G V KA E   ++ +   + N V+Y  LI+G C     NEA  L 
Sbjct: 106 DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 165

Query: 119 IEMMDQG--------VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
             +  +         V+ NVV ++++++ LC+NG +DE       M+  GV PN F Y +
Sbjct: 166 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 225

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+ G C  G+      L   M   G   +V+ +++LI+G CKN  +  A  ++ EM+++G
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            +P++V    L  G      V+ A +LFD +   G   D W Y  FI G CK G + +AV
Sbjct: 286 YEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAV 345

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +F  +       +I  YN LID LCK+G +  AWE+ +++ R  L  D+VT  I++  L
Sbjct: 346 RVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGL 405

Query: 351 CADGKMDKARDLF 363
           C   ++D+A  LF
Sbjct: 406 CKSKRLDQAILLF 418



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 128/258 (49%), Gaps = 8/258 (3%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F +++ +G   + V+ N ++  LC NG + +A    + ++  G   N   Y  L++G C
Sbjct: 94  IFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLC 153

Query: 177 LTGRVNRAEELF--------VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             GRVN A  L            +    K NV  YSI+I+  C+N  ++     Y+EM+ 
Sbjct: 154 ENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMG 213

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G+ P+   Y +L  GL  + +    F L DEM R G+    + +   IDGLCKNG +VE
Sbjct: 214 NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVE 273

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A E+F  +    YE +I     L+ G C  G + +A ELF ++       DV TYN+ IH
Sbjct: 274 AREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIH 333

Query: 349 ALCADGKMDKARDLFLDM 366
             C  G++  A  +F +M
Sbjct: 334 GYCKVGRVRDAVRVFDEM 351



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 74/149 (49%), Gaps = 8/149 (5%)

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            +  + S++ ++L +G   D V  NT+  GL     V +A +  DE+  +G + +  +Y 
Sbjct: 87  HVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYG 146

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYEL--------DIRAYNCLIDGLCKSGRLKIAWE 326
             I+GLC+NG + EAV L R +   K +         ++  Y+ +ID LC++G +   +E
Sbjct: 147 ILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFE 206

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGK 355
            +  +    +  +  TY  +I  LC  GK
Sbjct: 207 FYNEMMGNGVCPNEFTYGSLIRGLCGVGK 235



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 70/130 (53%), Gaps = 8/130 (6%)

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            F +  V  +F +F ++ + G   DT A  T + GLC NG +++A+E    +    + L+
Sbjct: 82  FFHLGHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLN 141

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPR-------GVLI-ADVVTYNIMIHALCADGKM 356
             +Y  LI+GLC++GR+  A  L R + +       G  +  +VV Y+I+I  LC +G +
Sbjct: 142 EVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFV 201

Query: 357 DKARDLFLDM 366
           D+  + + +M
Sbjct: 202 DEGFEFYNEM 211


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 200/368 (54%), Gaps = 7/368 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +++  G  P+  TYN++I+G  + G     +  FEEM +      + C+P+ +T
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVIT 334

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+  CK G +    E + +MK   + PNVV+Y++L+  FC      +A   +++M 
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  ++  +++  CK G + +A RL   M+Q+GV  N   Y  L+DG C   R+ 
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEELF  M++ G   N+ SY+ LI+G+ K K ++ AL L +E+  +GIKPD+++Y T  
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL  + ++E A  + +EM+  G+ A++  Y T +D   K+G   E + L   ++ L  E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARD 361
           + +  +  LIDGLCK+  +  A + F  +     L A+   +  MI  LC D +++ A  
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634

Query: 362 LFLDMEAK 369
           LF  M  K
Sbjct: 635 LFEQMVQK 642



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 169/315 (53%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VC P    +  +   L   G +++A + F KMK   + P   + N L+H F      ++ 
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           K  F +M+  G +P V ++N++++ +CK G ++ A  L E M   G+ P+   YN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           F   GR++     F  M+ M C+ +V +Y+ LIN +CK  ++   L  Y EM   G+KP+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+TL     +   +++A K + +M+R G+  + + Y + ID  CK G + +A  L  
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++  Y  LIDGLC + R+K A ELF  +    +I ++ +YN +IH      
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 355 KMDKARDLFLDMEAK 369
            MD+A +L  +++ +
Sbjct: 487 NMDRALELLNELKGR 501



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/324 (31%), Positives = 178/324 (54%), Gaps = 7/324 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   ++ +R  G  PN +TY +LI+  C+ G+   A  L  EM     E+      N V
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW------NVV 438

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDGLC    + +A+ELF KM    + PN+ +YN+LIHGF  A + + A  L  E+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+++ +   +  LC   K++ A  ++  M + G++ N+ +Y TLMD +  +G  
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
                L   M+ +  +  V ++ +LI+G CKNK +  A+  ++ + +  G++ +  I+  
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL + +QVE A  LF++M + G+  D  AY + +DG  K G ++EA+ L   +  + 
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678

Query: 301 YELDIRAYNCLIDGLCKSGRLKIA 324
            +LD+ AY  L+ GL    +L+ A
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKA 702



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 9/303 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G  PN+ +YN LI+G  +  +   AL L  E+  G G      KP+ +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRG-----IKPDLL 508

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T I GLC    ++ AK +  +MK+  I  N + Y +L+  +  + +  E   L  EM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +  ++  VV+F V+++ LCKN  + +A      +    G++ NA ++  ++DG C   +
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  LF  M   G   +  +Y+ L++G  K   +  AL+L  +M   G+K D++ Y +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL   +Q+++A    +EM   G+  D     + +    + G I EAVEL   L  +K
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL--MK 746

Query: 301 YEL 303
           ++L
Sbjct: 747 HQL 749


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 198/362 (54%), Gaps = 6/362 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  ++   G  PN++TY   I  L R G    A  + + M +        C P+ VTYT
Sbjct: 250 GLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDG------CGPDVVTYT 303

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +ID LC    +D A  LF KMK  +  P+ VTY +L+  F      ++ + ++ EM   
Sbjct: 304 VLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEAD 363

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+VV+F +++N LCK G+++EA  LL+ M + GV PN   YNTL+ G     R++ A
Sbjct: 364 GYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDA 423

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +LF +MES+G +   ++Y +LI+ + K+     AL  + +M ++GI P++V  N     
Sbjct: 424 LDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYS 483

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L E+ ++  A  +F+E++  G+A D+  Y   +    K G + EA++L   +  ++ E D
Sbjct: 484 LAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPD 543

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +   N LID L K+GR++ AW++F  +    L   VVTYNI++  L  +G++ KA  LF 
Sbjct: 544 VIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFE 603

Query: 365 DM 366
            M
Sbjct: 604 SM 605



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 177/333 (53%), Gaps = 7/333 (2%)

Query: 3    AAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+K  +  G +P +  YN LI+G     +  VA NLFEEM +        C P+T 
Sbjct: 773  ARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAG------CAPDTF 826

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY ++ID   K G +++  +L+ +M      PN +TYN +I     +N  ++A  L+  +
Sbjct: 827  TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNL 886

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +     P   +F  +++ L K+G++D+A  + + M+  G RPN+ +YN L++G+   G V
Sbjct: 887  VSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHV 946

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            + A E F  M   G + ++ SY+IL++  C    ++ AL  + ++   G+ PD+V YN +
Sbjct: 947  DTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLM 1006

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              GL    + E A  LF EMQ  G+  D + Y + I  L   G I EA +++  L+ +  
Sbjct: 1007 INGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGL 1066

Query: 302  ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
            + ++  YN LI G   SG  ++A+ +++ +  G
Sbjct: 1067 KPNVFTYNALIRGYTLSGNSELAYGIYKKMMVG 1099



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   GC P+V TY  LI+ LC       A+ LF +M + +       KP+ V
Sbjct: 282 EAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSH------KPDKV 335

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D     G +DK ++++ +M+ +   P+VVT+  L++  C A   NEA  L   M
Sbjct: 336 TYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTM 395

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QGV PN+ ++N +++ L +  ++D+A  L   M  +GV P A+ Y  L+D    +G  
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHP 455

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E F  M++ G   N+ + +  +    +   +  A ++++E+ S G+ PD V YN +
Sbjct: 456 GKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMM 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                ++ QV+ A KL  EM +     D     + ID L K G + EA ++F  +  +  
Sbjct: 516 MKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNL 575

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  YN L+ GL K G+++ A +LF S+       + +T+N ++  LC + ++D A  
Sbjct: 576 APTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALK 635

Query: 362 LFLDM 366
           +F  M
Sbjct: 636 MFYKM 640



 Score =  174 bits (440), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 166/326 (50%), Gaps = 7/326 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +R  G  PN+ TYNTLI+GL R      AL+LF  M +     GV  +P   
Sbjct: 387 EAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMES----LGV--EPTAY 440

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID   K G   KA E F KMK   I PN+V  N+ ++         EAK +F E+
Sbjct: 441 TYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNEL 500

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+ V++N++M    K G++DEA +LL  M ++   P+  V N+L+D     GRV
Sbjct: 501 KSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRV 560

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  ME M     V +Y+IL+ G  K  +I+ A+ L+  M   G  P+ + +NTL
Sbjct: 561 EEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTL 620

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V+ A K+F +M       D   + T I G  K   I  A+ LF  ++ L  
Sbjct: 621 LDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-L 679

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWEL 327
             D      L+ G+ KSG+++ A+ +
Sbjct: 680 RPDHVTLCTLLPGVIKSGQIEDAFRI 705



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 178/354 (50%), Gaps = 7/354 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           ++ ++   G  P+V T+  L+N LC+ G    A +L + M       GV+  PN  TY T
Sbjct: 356 IWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQ----GVL--PNLHTYNT 409

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL +   +D A +LF  M+   + P   TY  LI     +    +A   F +M  +G
Sbjct: 410 LISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARG 469

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PN+V+ N  +  L + G++ EA  +   +   G+ P++  YN +M  +   G+V+ A 
Sbjct: 470 IAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAI 529

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   M  + C+ +V   + LI+   K   +E A  ++  M    + P VV YN L  GL
Sbjct: 530 KLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGL 589

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  Q+++A +LF+ M  HG + +T  + T +D LCKN  +  A+++F  +  +    D+
Sbjct: 590 GKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDV 649

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +N +I G  K  ++K A  LF  + + +L  D VT   ++  +   G+++ A
Sbjct: 650 LTFNTIIHGFIKQNQIKNAIWLFHQMKK-LLRPDHVTLCTLLPGVIKSGQIEDA 702



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 178/366 (48%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +   K+R  G   N ++YN LI+ L ++G    AL ++  M +         KP+  
Sbjct: 177 QAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEG------LKPSLK 230

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ ++    K   +     L  +M+   + PN+ TY   I         +EA  +   M
Sbjct: 231 TFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRM 290

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G  P+VV++ V+++ LC   K+D+A  L   M     +P+   Y TL+D F   G +
Sbjct: 291 DDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHL 350

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++ E+++  ME+ G   +V +++IL+N  CK   I  A  L   M  +G+ P++  YNTL
Sbjct: 351 DKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTL 410

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL   ++++ A  LF  M+  GV    + Y   ID   K+G+  +A+E F  ++    
Sbjct: 411 ISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGI 470

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I A N  +  L + GRL  A  +F  L    L  D VTYN+M+      G++D+A  
Sbjct: 471 APNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIK 530

Query: 362 LFLDME 367
           L  +M 
Sbjct: 531 LLSEMS 536



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/342 (30%), Positives = 173/342 (50%), Gaps = 5/342 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
            +I  LC+   T VA N+F +      E GV  KP    Y  +IDG  +   V+ A  LF 
Sbjct: 760  IIKVLCKHKKTSVARNVFVKFTK---ELGV--KPTLKVYNLLIDGFLEVHNVEVAWNLFE 814

Query: 85   KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
            +MK     P+  TYNSLI     +   NE   L+ EM+ +G +PN +++N++++ L K+ 
Sbjct: 815  EMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSN 874

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            ++D+A  L   ++     P    +  L+DG   +GR++ A E+F  M   GC+ N   Y+
Sbjct: 875  RLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYN 934

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            IL+NGY K   ++ A   +  M+ +GI+PD+  Y  L   L    +V+ A   F+++++ 
Sbjct: 935  ILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQA 994

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            G+  D  AY   I+GL ++    EA+ LF  ++      D+  YN LI  L   G ++ A
Sbjct: 995  GLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEA 1054

Query: 325  WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             +++  L    L  +V TYN +I      G  + A  ++  M
Sbjct: 1055 GKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 194/431 (45%), Gaps = 67/431 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCK--- 57
           +A  LF  +   G EP  +TY  LI+   ++GH   AL  FE+M A G     V C    
Sbjct: 422 DALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASL 481

Query: 58  -------------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    P++VTY  ++    K G VD+A +L  +M      
Sbjct: 482 YSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCE 541

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+V+  NSLI     A    EA  +F  M +  + P VV++N+++  L K G++ +A +L
Sbjct: 542 PDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQL 601

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E M   G  PN   +NTL+D  C    V+ A ++F  M +M C+ +V +++ +I+G+ K
Sbjct: 602 FESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIK 661

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL--------------- 257
             +I+ A+ L+ +M  K ++PD V   TL  G+ +  Q+E AF++               
Sbjct: 662 QNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRS 720

Query: 258 FDEMQRHGVAADTWAYRTFIDG---------------------LCKNGYIVEAVELF-RT 295
           F E    G+  +    +  + G                     LCK+     A  +F + 
Sbjct: 721 FWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKF 780

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
            + L  +  ++ YN LIDG  +   +++AW LF  +       D  TYN +I A    GK
Sbjct: 781 TKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGK 840

Query: 356 MDKARDLFLDM 366
           +++  DL+ +M
Sbjct: 841 INELFDLYDEM 851



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 163/315 (51%), Gaps = 2/315 (0%)

Query: 54   VVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWN 112
             +CK ++V    II  LCK      A+ +F+K   E  + P +  YN LI GF   ++  
Sbjct: 749  AICKDDSV-LIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVE 807

Query: 113  EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
             A  LF EM   G  P+  ++N +++   K+GK++E   L + M+  G +PN   YN ++
Sbjct: 808  VAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVI 867

Query: 173  DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                 + R+++A +L+ ++ S        ++  LI+G  K+  ++ A  ++  M+  G +
Sbjct: 868  SNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCR 927

Query: 233  PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            P+  IYN L  G  ++  V+ A + F  M + G+  D  +Y   +D LC  G + +A+  
Sbjct: 928  PNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHY 987

Query: 293  FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
            F  L+    + D+ AYN +I+GL +S R + A  LF  +    ++ D+ TYN +I  L  
Sbjct: 988  FEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGI 1047

Query: 353  DGKMDKARDLFLDME 367
             G +++A  ++ +++
Sbjct: 1048 VGMIEEAGKIYEELQ 1062



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 156/315 (49%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           + + N  TY  I   L   G + +A     KM++     N  +YN LIH    +    EA
Sbjct: 154 IIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEA 213

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             ++  M+ +G++P++ +F+ +M    K   +     LLE M  +G+RPN + Y   +  
Sbjct: 214 LEVYRRMVSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRV 273

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
               G+++ A  +   M+  GC  +V +Y++LI+  C  ++++ A+ L+++M S   KPD
Sbjct: 274 LGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPD 333

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
            V Y TL     +   +++  K++ EM+  G A D   +   ++ LCK G I EA +L  
Sbjct: 334 KVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLD 393

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           T+R      ++  YN LI GL ++ RL  A +LF ++    +     TY ++I      G
Sbjct: 394 TMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSG 453

Query: 355 KMDKARDLFLDMEAK 369
              KA + F  M+A+
Sbjct: 454 HPGKALETFEKMKAR 468



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 41/306 (13%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  LF +++  GC P+ FTYN+LI+   ++G      +L++EM          CKPNT+T
Sbjct: 809  AWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG------CKPNTIT 862

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            Y  +I  L K   +DKA +L+  +   + +P   T+  LI G   +   ++A  +F  M+
Sbjct: 863  YNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMV 922

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              G +PN   +N+++N   K G +D A    + M++ G+RP+   Y  L+D  C+ GRV+
Sbjct: 923  HYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVD 982

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI----------- 231
             A   F  ++  G   ++ +Y+++ING  +++  E ALSL+ EM ++GI           
Sbjct: 983  DALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLI 1042

Query: 232  ------------------------KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                                    KP+V  YN L  G       E A+ ++ +M   G  
Sbjct: 1043 LNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCD 1102

Query: 268  ADTWAY 273
             +T  +
Sbjct: 1103 PNTGTF 1108



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 111/207 (53%), Gaps = 6/207 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  +F  +  +GC PN   YN L+NG  + GH   A   F+ M           +P+  
Sbjct: 913  DAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEG------IRPDLK 966

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +YT ++D LC  G VD A   F K+K   ++P++V YN +I+G   +    EA  LF EM
Sbjct: 967  SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P++ ++N ++  L   G ++EA ++ E +  IG++PN F YN L+ G+ L+G  
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086

Query: 182  NRAEELFVSMESMGCKHNVFSYSILIN 208
              A  ++  M   GC  N  +++ L N
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTFAQLPN 1113



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 133/265 (50%), Gaps = 29/265 (10%)

Query: 6    LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV----- 55
            L+ ++   GC+PN  TYN +I+ L ++     A++L+  + +G+       FG +     
Sbjct: 847  LYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLL 906

Query: 56   -------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
                               C+PN+  Y  +++G  K G VD A E F +M  E I P++ 
Sbjct: 907  KSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLK 966

Query: 97   TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
            +Y  L+   C A   ++A   F ++   G+ P++V++N+++N L ++ + +EA  L   M
Sbjct: 967  SYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEM 1026

Query: 157  IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
               G+ P+ + YN+L+    + G +  A +++  ++ +G K NVF+Y+ LI GY  +   
Sbjct: 1027 QNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNS 1086

Query: 217  EGALSLYSEMLSKGIKPDVVIYNTL 241
            E A  +Y +M+  G  P+   +  L
Sbjct: 1087 ELAYGIYKKMMVGGCDPNTGTFAQL 1111



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 130/281 (46%), Gaps = 4/281 (1%)

Query: 93  PNVV----TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           PNVV    T N ++          +   +F  M  Q ++ NV ++ +I   L   G + +
Sbjct: 118 PNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLRQ 177

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A   LE M + G   NA+ YN L+     +G    A E++  M S G K ++ ++S L+ 
Sbjct: 178 APSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTFSALMV 237

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              K + I+  + L  EM S G++P++  Y      L    +++ A+++   M   G   
Sbjct: 238 ASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGP 297

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           D   Y   ID LC    + +A+ LF  ++   ++ D   Y  L+D     G L    +++
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +       DVVT+ I+++ALC  G++++A DL   M  +
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQ 398



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 79/138 (57%), Gaps = 6/138 (4%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A   F KL+  G +P++  YN +INGL R+  T  AL+LF EM N     G+V  P+  
Sbjct: 983  DALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNR----GIV--PDLY 1036

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY ++I  L   G +++A +++ +++   + PNV TYN+LI G+  + +   A  ++ +M
Sbjct: 1037 TYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096

Query: 122  MDQGVQPNVVSFNVIMNE 139
            M  G  PN  +F  + N+
Sbjct: 1097 MVGGCDPNTGTFAQLPNQ 1114


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 188/353 (53%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  T++T +NGLC+ GH   AL +   M          C+P+  TY+T+I+ LC  
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEG------CEPDVYTYSTVINCLCNN 349

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++AK +  +M D    P+  T+N+LI   C  N   EA  L  E+  +G+ PNV +F
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTF 409

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK G    A RL E M   G  P+   YN L+D  C +G++ +A +L   ME 
Sbjct: 410 NILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEV 469

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+G CK + IE A  ++ +M   GI  + + +NTL  GL    +++ 
Sbjct: 470 SGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDD 529

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L D+M   G+  +   Y + +   CK G I +A ++ +T+    +E+D+  Y  LI+
Sbjct: 530 AAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLIN 589

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+ R + A +L R +    +      YN +I +L        A  LF +M
Sbjct: 590 GLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREM 642



 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 194/362 (53%), Gaps = 6/362 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           + + ++   G EP+V T+NT+I+ LCR      A+ + EEM++ +        P+  T+T
Sbjct: 182 SAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD------VAPDETTFT 235

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+++G  +EG ++ A  L  +M +   +P  VT N LI+G+C      +A     + +  
Sbjct: 236 TLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD 295

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ V+F+  +N LC+NG +D A ++L LM+Q G  P+ + Y+T+++  C  G +  A
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + +   M   GC  +  +++ LI   C   ++E AL L  E+  KG+ P+V  +N L   
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINA 415

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++     A +LF+EM+  G   D   Y   ID LC +G + +A++L + + +      
Sbjct: 416 LCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQS 475

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              YN +IDGLCK  R++ A E+F  +    +  + +T+N +I  LC   ++D A +L  
Sbjct: 476 TVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVD 535

Query: 365 DM 366
            M
Sbjct: 536 QM 537



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 191/369 (51%), Gaps = 10/369 (2%)

Query: 4   AALFMKLRV--FGCEPNVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNT 60
           AAL +K R+   GC P   T N LING C+ G    AL  + +E+A+G        +P+ 
Sbjct: 249 AALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADG-------FEPDR 301

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT++T ++GLC+ G VD A ++   M  E   P+V TY+++I+  C   +  EAK +  +
Sbjct: 302 VTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQ 361

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G  P+  +FN ++  LC   +++EA  L   +   G+ PN + +N L++  C  G 
Sbjct: 362 MVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGD 421

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A  LF  M+S GC  +  +Y+ILI+  C + ++  AL L  EM   G     V YNT
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNT 481

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  ++E A ++FD+M   G+  +   + T IDGLC    I +A EL   +    
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG 541

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +   YN ++   CK G +  A ++ +++       DVVTY  +I+ LC   +   A 
Sbjct: 542 LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601

Query: 361 DLFLDMEAK 369
            L   M  K
Sbjct: 602 KLLRGMRMK 610



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 171/319 (53%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +L V G  PNV+T+N LIN LC+ G   +A+ LFEEM +        C P+ V
Sbjct: 389 EALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSG------CTPDEV 442

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC  G + KA +L  +M+      + VTYN++I G C      EA+ +F +M
Sbjct: 443 TYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQM 502

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  N ++FN +++ LC   ++D+A+ L++ MI  G++PN   YN+++  +C  G +
Sbjct: 503 DVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNI 562

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A ++  +M + G + +V +Y+ LING CK +  + AL L   M  KG+KP    YN +
Sbjct: 563 SKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPV 622

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF  +    A  LF EM   G   D + Y+    GLC+  G I EA +    +    
Sbjct: 623 IQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNG 682

Query: 301 YELDIRAYNCLIDGLCKSG 319
           +  +  ++  L +GL   G
Sbjct: 683 FIPEFSSFRMLAEGLLNLG 701



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 143/312 (45%), Gaps = 35/312 (11%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           +  N   YN L+      +     +  + EM  QG++P+VV+FN +++ LC+  +   A 
Sbjct: 157 VQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAV 216

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            +LE M    V P+   + TLM+GF   G +  A  L   M  MGC     + ++LINGY
Sbjct: 217 LMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGY 276

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +  AL    + ++ G +PD V ++T   GL +   V+ A K+   M + G   D 
Sbjct: 277 CKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDV 336

Query: 271 WAYRTFIDGLCKNG-----------------------------------YIVEAVELFRT 295
           + Y T I+ LC NG                                    + EA++L R 
Sbjct: 337 YTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARE 396

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           L +     ++  +N LI+ LCK G   +A  LF  +       D VTYNI+I  LC+ GK
Sbjct: 397 LTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK 456

Query: 356 MDKARDLFLDME 367
           + KA DL  +ME
Sbjct: 457 LAKALDLLKEME 468



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 140/313 (44%), Gaps = 1/313 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   Y  II  L   G  D  K L  +M+ E     +    S I  +     +++A  L
Sbjct: 88  PSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL 147

Query: 118 FIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
               +D  GVQ N   +N ++  L +  K+         M   G+ P+   +NT++D  C
Sbjct: 148 VSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALC 207

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              +   A  +   M S     +  +++ L+ G+ +   IE AL L + M   G  P  V
Sbjct: 208 RARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSV 267

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             N L  G  ++ +V  A     +    G   D   + TF++GLC+NG++  A+++   +
Sbjct: 268 TVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLM 327

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                E D+  Y+ +I+ LC +G L+ A  +   +     + D  T+N +I ALC + ++
Sbjct: 328 LQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQL 387

Query: 357 DKARDLFLDMEAK 369
           ++A DL  ++  K
Sbjct: 388 EEALDLARELTVK 400



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 66/158 (41%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   G E +V TY TLINGLC+   T  AL L   M           KP   
Sbjct: 564 KAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKG------MKPTPK 617

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  +I  L +      A  LF +M +    P+  TY  +  G C       EA    +E
Sbjct: 618 AYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVE 677

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M D G  P   SF ++   L   G  D   R +EL+++
Sbjct: 678 MADNGFIPEFSSFRMLAEGLLNLGMDDYLIRAIELIVE 715


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 190/377 (50%), Gaps = 29/377 (7%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV-------------------- 55
           EP+ +TYNTLI GLC  G T  AL + +EM        VV                    
Sbjct: 155 EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK 214

Query: 56  ---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 106
                    C P+ VTY  +++G+C+EG VD A E    +      PN V+YN ++ G C
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 274

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
            A  W +A+ L  EM  +G  PNVV+FN++++ LC+ G ++ A  +LE + + G  PN+ 
Sbjct: 275 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 334

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            YN L+  FC   ++++A      M S GC  ++ SY+ L+   C++ E++ A+ L  ++
Sbjct: 335 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 394

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             KG  P ++ YNT+  GL +  + + A +L +EM   G+  D   Y T   GLC+   I
Sbjct: 395 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 454

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +A+  F  ++ +    +   YN +I GLCK      A +LF  +     + +  TY I+
Sbjct: 455 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 514

Query: 347 IHALCADGKMDKARDLF 363
           I  L  +G + +ARDL 
Sbjct: 515 IEGLAYEGLIKEARDLL 531



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 182/336 (54%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  GC P++ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV
Sbjct: 211 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTV 264

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++ GLC     + A+EL  +M  +   PNVVT+N LI   C       A  +  ++
Sbjct: 265 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 324

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N +++  CK  KMD+A   L+LM+  G  P+   YNTL+   C +G V
Sbjct: 325 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 384

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++PD++ Y+T+
Sbjct: 385 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF  +     
Sbjct: 445 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 504

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             +   Y  LI+GL   G +K A +L   L  RGV+
Sbjct: 505 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 540



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 173/362 (47%), Gaps = 16/362 (4%)

Query: 10  LRVFGC--EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           LR+ G    P+  T   LI  L  +G T  A  +              C P+ + Y  ++
Sbjct: 85  LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----------AACGPDVMAYNAMV 133

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            G C  G +D A+ L  +M    + P+  TYN+LI G C       A  +  EM+ +   
Sbjct: 134 AGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCV 190

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+VV++ +++   CK     +A +LL+ M   G  P+   YN +++G C  GRV+ A E 
Sbjct: 191 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 250

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
             ++ S GC+ N  SY+I++ G C  +  E A  L  EM  KG  P+VV +N L   L  
Sbjct: 251 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 310

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
              VE A ++ +++ ++G   ++ +Y   +   CK   + +A+     +       DI +
Sbjct: 311 KGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 370

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN L+  LC+SG + +A EL   L        +++YN +I  L   GK  +A +L  +M 
Sbjct: 371 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 430

Query: 368 AK 369
           +K
Sbjct: 431 SK 432


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 198/371 (53%), Gaps = 8/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  ++   C P++ TYN LIN  C  G    AL+LF+ M           +P+  
Sbjct: 28  QALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK-----RVEPDRW 82

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GLC  G  + A++L  +M+D+NI  NV TY+S+I          E+  +  EM
Sbjct: 83  TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEM 142

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G  P+V +FN +M    ++  M++A  + + M++ G +P+   Y+ L+ G    G++
Sbjct: 143 MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKL 202

Query: 182 NRAEELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           + + ++   ++M + G   NV ++S LI+G C+  E+E AL ++  ML  G KP+   Y 
Sbjct: 203 DESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 262

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-I 298
           TL  GL    +V +A +LF++M +  +  D  AY + I G CK G + EA +L+R +   
Sbjct: 263 TLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 322

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +  I  +N LIDG CK G+L  A EL   +    L AD  TY I+I  L    K+D+
Sbjct: 323 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDE 382

Query: 359 ARDLFLDMEAK 369
           A +++  M  K
Sbjct: 383 ALEVYKQMREK 393



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 207/392 (52%), Gaps = 44/392 (11%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP+ +TYNTLI+GLC +G+T  A  L  EM + N         N  TY++II  L KE  
Sbjct: 78  EPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKN------IAANVFTYSSIIKSLVKEAK 131

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            +++ ++  +M     NP+V  +N ++ GF  +N+  +A+ ++  M++ G +P+ VS+++
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 136 IMNELCKNGKMDEASRLLELMI--QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++ L K GK+DE+ ++L  M     G  PN   ++TL+ G C TG + +A E+F SM  
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 194 MGCKHNVFSYSI-----------------------------------LINGYCKNKEIEG 218
            GCK N ++Y+                                    LI GYCK   ++ 
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 219 ALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           A  LY EM    G++P +V +NTL  G  ++ ++ RA +L  EM   G+AADT  YR  I
Sbjct: 312 AEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILI 371

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            GL +   + EA+E+++ +R  K+ LD  +    + GLCK+G +  A+ +F +  +   +
Sbjct: 372 AGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAV 431

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  T+ I+  +L   G+++ A+ L    +A+
Sbjct: 432 PNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 188/353 (53%), Gaps = 10/353 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
            Y+ ++  L + G    AL +FE M + +      C P+ VTY  +I+  C  G   KA 
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSES------CVPSLVTYNVLINSRCNAGEFGKAL 65

Query: 81  ELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
           +LF  MK E  + P+  TYN+LI G C + +   A+ L  EM D+ +  NV +++ I+  
Sbjct: 66  DLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKS 125

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L K  K +E+ ++LE M+  G  P+ F +N +M GF  +  + +A E++  M   G K +
Sbjct: 126 LVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPD 185

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEML--SKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             SY ILI+G  K  +++ +L + SEM   + G  P+V+ ++TL  GL    ++E+A ++
Sbjct: 186 NVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEV 245

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M   G   + + Y T I GLC+   +++A ELF  +       D  AYN LI G CK
Sbjct: 246 FGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 305

Query: 318 SGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G +  A +L+R +  G  L   +VT+N +I   C  GK+ +A +L  +M  K
Sbjct: 306 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTK 358



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 135/263 (51%), Gaps = 7/263 (2%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M +R  G  PNV T++TLI+GLCRTG    AL +F  M          CKPN  TYTT+I
Sbjct: 212 MAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAG------CKPNKYTYTTLI 265

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-QGV 126
            GLC+   V +A+ELF KM    I P+ V YNSLI G+C     +EA+ L+ EM    G+
Sbjct: 266 AGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGL 325

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           QP +V+FN +++  CK GK+  A+ L+  M   G+  +   Y  L+ G     +++ A E
Sbjct: 326 QPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALE 385

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           ++  M       +  S    + G CK   I+ A +++      G  P+   +  L   L 
Sbjct: 386 VYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLI 445

Query: 247 EIHQVERAFKLFDEMQRHGVAAD 269
           ++ +VE A KL +  +   + A 
Sbjct: 446 KLGRVEDAQKLMEPAKARDITAQ 468



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 117/236 (49%), Gaps = 17/236 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   GC+PN +TY TLI GLCR    I A  LFE+M            P+ V
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ------ACIPPDAV 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMK-DENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            Y ++I G CK G +D+A++L+ +M     + P +VT+N+LI GFC       A  L  E
Sbjct: 295 AYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAE 354

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN-----TLMDGF 175
           M  +G+  +  ++ +++  L +  K+DEA   LE+  Q+  R   F+ +     + + G 
Sbjct: 355 MGTKGLAADTCTYRILIAGLSRATKLDEA---LEVYKQM--REKKFLLDPVSCVSFVGGL 409

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           C TG +++A  +F +    G   N  ++ IL     K   +E A  L     ++ I
Sbjct: 410 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 465



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 59/188 (31%), Positives = 92/188 (48%), Gaps = 5/188 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF K+      P+   YN+LI G C+ G    A  L+ EM+ G G      +P  
Sbjct: 275 IQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAG-----LQPTI 329

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT+ T+IDG CK G + +A EL  +M  + +  +  TY  LI G   A   +EA  ++ +
Sbjct: 330 VTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQ 389

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++    + VS    +  LCK G +D+A  + E   + G  PN   +  L +     GR
Sbjct: 390 MREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGR 449

Query: 181 VNRAEELF 188
           V  A++L 
Sbjct: 450 VEDAQKLM 457



 Score = 70.1 bits (170), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 1/177 (0%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M    C     +Y  ++    K   +  AL ++  M S+   P +V YN L        +
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 251 VERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
             +A  LF  M+R   V  D W Y T I GLC +G    A +L   +R      ++  Y+
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +I  L K  + + ++++   +       DV  +N ++        M+KAR+++  M
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 177


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/394 (34%), Positives = 198/394 (50%), Gaps = 46/394 (11%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L+  ++  G  PNVFTYN L+  LC+      A  LF EM+N        C P+ VTYT
Sbjct: 165 PLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG------CPPDAVTYT 218

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++  LCK G +D A+EL  + K     P+V  YN+LI G C       A  L  EMMD 
Sbjct: 219 TMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273

Query: 125 GVQPNVVSFNVIMNELCKN-----------------------------------GKMDEA 149
           GV PNVVS++ I+N LC +                                   GK+ EA
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             L +LMIQ G  PN   YNTL+ G C  G +  A ++   M+  GC  NV +YSILI+G
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           + K+ ++ GA   ++ M+S G +P+VV Y  +   L +    ++A  L ++M   G   +
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
           T  + TFI GLC NG +  A++L   ++      +I  YN L+D L +  + + A+ LF+
Sbjct: 454 TMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +    L  ++VTYN +++     G M +A  LF
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 166/339 (48%), Gaps = 7/339 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV +Y+ +IN LC +G+  +A  LF +M      F   C  N  T+T +I G    
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQM------FLRGCDANIHTFTPLIKGCFMR 327

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A +L+  M  +   PNVV YN+LIHG C      EA  +  +M   G  PNV ++
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++   K+G +  AS     MI  G RPN   Y  ++D  C     ++A  L   M  
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  N  +++  I G C N  +E A+ L   M   G  P++  YN L   LF +++ E 
Sbjct: 448 EGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF LF E++   +  +   Y T + G  + G + EA++LF    +     D   YN +I 
Sbjct: 508 AFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIH 567

Query: 314 GLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALC 351
             CK G++KIA +L  R         D++TY  +I   C
Sbjct: 568 AYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGAC 606



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 157/348 (45%), Gaps = 42/348 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+  +   GCEPNV  YNTLI+GLC  G    AL + ++M          C PN  
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG------CLPNVT 385

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDG  K G +  A E + +M      PNVVTY  ++   C  + +++A  L  +M
Sbjct: 386 TYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKM 445

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN ++FN  +  LC NG+++ A +LLE M   G  PN   YN L+D      R+
Sbjct: 446 TLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALF---RM 502

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+ EE F                                 L+ E+ ++ ++P++V YNT+
Sbjct: 503 NKYEEAF--------------------------------GLFQEIEARNLQPNLVTYNTV 530

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK- 300
             G      +  A +LF +    G A D+  Y T I   CK G +  A +L   +  +K 
Sbjct: 531 LYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           +  DI  Y  LI G C    ++ A           +  +  T+N ++ 
Sbjct: 591 WHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 10/321 (3%)

Query: 39  LNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY 98
           L  F  +AN N       +    TY  +I+ L +E  +D  + +  +MK + IN     +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
             +I+G+       +A  +F  + + G +P V  +N +++ L    K    + L   M +
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PN F YN L+   C   RV+ A +LFV M + GC  +  +Y+ +++  CK  +I+ 
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L         KP V +YN L  G+ +  ++E A KL  EM  +GV  +  +Y   I+
Sbjct: 233 ARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            LC +G +  A  LF  + +   + +I  +  LI G    G+L  A +L++ + +     
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 339 DVVTYNIMIHALCADGKMDKA 359
           +VV YN +IH LC++G +++A
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEA 368



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 135/264 (51%), Gaps = 7/264 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+  + ++   GC PNV TY  +++ LC+      A +L E+M          C PNT+T
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG------CTPNTMT 456

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T I GLC  G V+ A +L  +M+     PN+ TYN L+      N + EA  LF E+ 
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + +QPN+V++N ++    + G M EA +L    +  G  P++  YNT++  +C  G+V 
Sbjct: 517 ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576

Query: 183 RAEELFVSMESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A +L   + SM   H ++ +Y+ LI G C    IE A++   + +++GI P+   +N L
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG 265
               F+         + D++ R G
Sbjct: 637 VRCFFDSLGHMGPIHILDDILRKG 660



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K  V G  P+  TYNT+I+  C+ G   +A  L E +++   E+     P+ +
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK-EW----HPDII 596

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           TYT++I G C    +++A     K  ++ I PN  T+N+L+  F
Sbjct: 597 TYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 60/113 (53%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  +M+  G+      +   I+G  + G   +A+++F  +     +  +R YN L+D L 
Sbjct: 96  ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              + ++   L+ ++ +  LI +V TYNI++ ALC + ++D A  LF++M  K
Sbjct: 156 SENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNK 208


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 190/377 (50%), Gaps = 29/377 (7%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV-------------------- 55
           EP+ +TYNTLI GLC  G T  AL + +EM        VV                    
Sbjct: 29  EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK 88

Query: 56  ---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 106
                    C P+ VTY  +++G+C+EG VD A E    +      PN V+YN ++ G C
Sbjct: 89  LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLC 148

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
            A  W +A+ L  EM  +G  PNVV+FN++++ LC+ G ++ A  +LE + + G  PN+ 
Sbjct: 149 TAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSL 208

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            YN L+  FC   ++++A      M S GC  ++ SY+ L+   C++ E++ A+ L  ++
Sbjct: 209 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 268

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             KG  P ++ YNT+  GL +  + + A +L +EM   G+  D   Y T   GLC+   I
Sbjct: 269 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 328

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +A+  F  ++ +    +   YN +I GLCK      A +LF  +     + +  TY I+
Sbjct: 329 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 388

Query: 347 IHALCADGKMDKARDLF 363
           I  L  +G + +ARDL 
Sbjct: 389 IEGLAYEGLIKEARDLL 405



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 178/330 (53%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  GC P++ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV
Sbjct: 85  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTV 138

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++ GLC     + A+EL  +M  +   PNVVT+N LI   C       A  +  ++
Sbjct: 139 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 198

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N +++  CK  KMD+A   L+LM+  G  P+   YNTL+   C +G V
Sbjct: 199 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 258

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++PD++ Y+T+
Sbjct: 259 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 318

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF  +     
Sbjct: 319 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 378

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
             +   Y  LI+GL   G +K A +L   L
Sbjct: 379 MPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 171/344 (49%), Gaps = 9/344 (2%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
             YN ++ G C  G    A  L  EM           +P+  TY T+I GLC  G    A
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---------VEPDAYTYNTLIRGLCGRGRTANA 51

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
             +  +M      P+VVTY  L+   C  + + +A  L  EM D+G  P++V++NV++N 
Sbjct: 52  LAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNG 111

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           +C+ G++D+A   L+ +   G  PN   YN ++ G C   R   AEEL   M   GC  N
Sbjct: 112 ICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPN 171

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V ++++LI+  C+   +E AL +  ++   G  P+ + YN L     +  ++++A    D
Sbjct: 172 VVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLD 231

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M   G   D  +Y T +  LC++G +  AVEL   L+       + +YN +IDGL K+G
Sbjct: 232 LMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAG 291

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           + K A EL   +    L  D++TY+ +   LC + +++ A   F
Sbjct: 292 KTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAF 335



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/309 (29%), Positives = 155/309 (50%), Gaps = 3/309 (0%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  ++ G C  G +D A+ L  +M    + P+  TYN+LI G C       A  +  E
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +   P+VV++ +++   CK     +A +LL+ M   G  P+   YN +++G C  GR
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A E   ++ S GC+ N  SY+I++ G C  +  E A  L  EM  KG  P+VV +N 
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L     VE A ++ +++ ++G   ++ +Y   +   CK   + +A+     +    
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              DI +YN L+  LC+SG + +A EL   L        +++YN +I  L   GK  +A 
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 361 DLFLDMEAK 369
           +L  +M +K
Sbjct: 298 ELLNEMVSK 306



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 129/247 (52%), Gaps = 9/247 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++  +GC PN  +YN L++  C+      A+   + M +        C P+ V+
Sbjct: 191 ALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG------CYPDIVS 244

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++  LC+ G VD A EL  ++KD+   P +++YN++I G   A    EA  L  EM+
Sbjct: 245 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 304

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+QP++++++ I   LC+  ++++A R    +  +G+RPN  +YN ++ G C     +
Sbjct: 305 SKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETH 364

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVIYN 239
            A +LF  M   GC  N  +Y+ILI G      I+ A  L  E+ S+    I  DV + +
Sbjct: 365 SAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDVHLID 424

Query: 240 TLFIGLF 246
             F+  F
Sbjct: 425 VAFLTTF 431


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 199/369 (53%), Gaps = 12/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  + V  C+P+V+TY TL++GLC+      A++L +EM          C P+ V
Sbjct: 187 DAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG------CFPSPV 240

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+GLCK+G + +  +L   M  +   PN VTYN+LIHG C      +A  L   M
Sbjct: 241 TFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM 300

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PNVV++  I+N L K G+  + +R+L LM + G   N +VY+ L+ G    G+ 
Sbjct: 301 VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKS 360

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M    C+ N   YS +I+G C++ + + AL + SEM +   KP+   Y++L
Sbjct: 361 QEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSL 420

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G FE     +A +++ +M +H    +   Y   I GLCK+G + EA+ ++  +     
Sbjct: 421 MKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGC 480

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL----PRGVLIADVVTYNIMIHALCADGKMD 357
           + D+ AY  +I+GL  +G ++ A +L+  +    P      DVVTYNI+++ALC    + 
Sbjct: 481 KPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQ--PDVVTYNILLNALCKQSSIS 538

Query: 358 KARDLFLDM 366
           +A DL   M
Sbjct: 539 RAIDLLNSM 547



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/370 (32%), Positives = 196/370 (52%), Gaps = 6/370 (1%)

Query: 2   EAAALFMKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A  LF ++   F C+  V ++N+++N + + G    AL  +  +    G  GV   PN 
Sbjct: 113 KAVGLFDRMAYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVI---GAKGVNISPNV 169

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T+  +I  +CK G VD A ++F  M      P+V TY +L+ G C A+  +EA  L  E
Sbjct: 170 LTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDE 229

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ V+FNV++N LCK G +   ++L++ M   G  PN   YNTL+ G CL G+
Sbjct: 230 MQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGK 289

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIYN 239
           + +A  L   M S  C  NV +Y  +ING  K  + ++GA  L + M  +G   +  +Y+
Sbjct: 290 LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVL-ALMEERGYHVNEYVYS 348

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GLF+  + + A +LF EM       +T  Y   IDGLC++G   EA+E+   +   
Sbjct: 349 ALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN 408

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + + +   Y+ L+ G  ++G    A E+++ + +     + V Y+++IH LC DGK+ +A
Sbjct: 409 RCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEA 468

Query: 360 RDLFLDMEAK 369
             ++  M  K
Sbjct: 469 MMVWAQMLGK 478



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 170/385 (44%), Gaps = 61/385 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN  TYNTLI+GLC  G    A++L + M +        C PN VTY TII+GL K+
Sbjct: 269 GCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK------CVPNVVTYGTIINGLVKQ 322

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G       +   M++   + N   Y++LI G        EA  LF EM  +  + N + +
Sbjct: 323 GRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVY 382

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF------------------ 175
           + +++ LC++GK DEA  +L  M     +PNA+ Y++LM GF                  
Sbjct: 383 SAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAK 442

Query: 176 -----------------CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
                            C  G+V  A  ++  M   GCK +V +Y  +ING      +E 
Sbjct: 443 HNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVED 502

Query: 219 ALSLYSEMLSK--GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           AL LY+EML +    +PDVV YN L   L +   + RA  L + M   G   D       
Sbjct: 503 ALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPD------- 555

Query: 277 IDGLCKNGYIVEAVELFRTLR-ILKYELDIRAY-NCLIDGLCKSGRLKIAWELFRSLPRG 334
                    +V  +   RTLR  L    D R + + L+  L K  R+  A ++   + + 
Sbjct: 556 ---------LVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQK 606

Query: 335 VLIADVVTYNIMIHALCADGKMDKA 359
           +L     T+  ++  LC   K+  A
Sbjct: 607 LLPPKPSTWTRVVEDLCNPKKVQAA 631



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 131/238 (55%), Gaps = 8/238 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++ A +   +   G   N + Y+ LI+GL + G +  A+ LF+EM          C+ NT
Sbjct: 326 LDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKE------CELNT 379

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y+ +IDGLC++G  D+A E+  +M +    PN  TY+SL+ GF  A + ++A  ++ +
Sbjct: 380 IVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKD 439

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M       N V ++V+++ LCK+GK+ EA  +   M+  G +P+   Y ++++G    G 
Sbjct: 440 MAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGL 499

Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           V  A +L+  M  +    + +V +Y+IL+N  CK   I  A+ L + ML +G  PD+V
Sbjct: 500 VEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLV 557



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 29/278 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++ V  CE N   Y+ +I+GLCR G    AL +  EM N        CKPN  
Sbjct: 362 EAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNR------CKPNAY 415

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++ G  + G   KA E++  M   N   N V Y+ LIHG C      EA  ++ +M
Sbjct: 416 TYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQM 475

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI--QIGVRPNAFVYNTLMDGFCLTG 179
           + +G +P+VV++  ++N L   G +++A +L   M+  +   +P+   YN L++  C   
Sbjct: 476 LGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQS 535

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSI---------------------LINGYCKNKEIEG 218
            ++RA +L  SM   GC  ++ +  I                     L+    K + + G
Sbjct: 536 SISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLG 595

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           A  +   ML K + P    +  +   L    +V+ A +
Sbjct: 596 ASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQ 633


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 200/399 (50%), Gaps = 30/399 (7%)

Query: 1   MEAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--- 56
           ME AA  +K +   GC+PN  T+  LI G CR  +   AL L +EM   N     V    
Sbjct: 96  MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 155

Query: 57  --------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                                     KPN V Y+T+I G   EG +++A+ L   M    
Sbjct: 156 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 215

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P++  YN++I     A    EA    +E+  +G++P+ V+F   +    K GKM EA+
Sbjct: 216 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 275

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +  + M+  G+ PN  +Y  L++G    G +  A  +F  + ++G   +V + S  I+G 
Sbjct: 276 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 335

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            KN  ++ AL ++SE+  KG+ PDV  Y++L  G  +  +VE+AF+L DEM   G+A + 
Sbjct: 336 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 395

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + Y   +DGLCK+G I  A +LF  +     E D   Y+ +IDG CKS  +  A+ LF  
Sbjct: 396 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 455

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +P   +      YN ++H  C +G M+KA +LF +M  K
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 494



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 196/368 (53%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G  P++F YN +I+ L + G    A     E+  G G      KP+ V
Sbjct: 203 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI-QGRG-----LKPDAV 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+   I G  K G + +A + F +M D  + PN   Y  LI+G   A +  EA  +F  +
Sbjct: 257 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V + +  ++ L KNG++ EA ++   + + G+ P+ F Y++L+ GFC  G V
Sbjct: 317 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 376

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A EL   M   G   N+F Y+ L++G CK+ +I+ A  L+  M  KG++PD V Y+T+
Sbjct: 377 EKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTM 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V  AF LF EM   GV   ++ Y   + G CK G + +A+ LFR +    +
Sbjct: 437 IDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF 496

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              + ++N LIDG CKS +++ A +LF+ +    ++ D VTY  +I   C  GKM++A  
Sbjct: 497 ATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANL 555

Query: 362 LFLDMEAK 369
           LF +M+ +
Sbjct: 556 LFKEMQER 563



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/375 (32%), Positives = 202/375 (53%), Gaps = 24/375 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+   ++++  G +P+  T+   I G  +TG    A   F+EM +     G++  PN  
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD----HGLM--PNNP 291

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +I+G  K G + +A  +F  +    + P+V T ++ IHG        EA  +F E+
Sbjct: 292 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 351

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V +++ +++  CK G++++A  L + M   G+ PN F+YN L+DG C +G +
Sbjct: 352 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA +LF  M   G + +  +YS +I+GYCK++ +  A SL+ EM SKG++P   +YN L
Sbjct: 412 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +E+A  LF EM + G A  T ++ T IDG CK+  I EA +LF+ +   + 
Sbjct: 472 VHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 530

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV-----------------VTYN 344
             D   Y  +ID  CK+G+++ A  LF+ +    LI D                  VTY 
Sbjct: 531 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYG 590

Query: 345 IMIHALCADGKMDKA 359
           ++I+A C +  + +A
Sbjct: 591 LVIYAHCKEDNLVEA 605



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   N+ TYN LI+GLC+ G    A  + + M        + CKPN+ T+  +I+G C+E
Sbjct: 75  GIPINLITYNVLIHGLCKFGKMEKAAEILKGMIT------LGCKPNSRTFCLLIEGYCRE 128

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A EL  +M+  N+ P+ V+Y ++I+G C+  D + A  L  +M   G++PNVV +
Sbjct: 129 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 188

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++      G+++EA RLL+ M   GV P+ F YN ++      G++  A    + ++ 
Sbjct: 189 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 248

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K +  ++   I GY K  ++  A   + EML  G+ P+  +Y  L  G F+   +  
Sbjct: 249 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 308

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +F  +   GV  D      FI GL KNG + EA+++F  L+      D+  Y+ LI 
Sbjct: 309 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 368

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G CK G ++ A+EL   +    +  ++  YN ++  LC  G + +AR LF  M  K
Sbjct: 369 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 424



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 187/382 (48%), Gaps = 29/382 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------------GEFGVV 55
           G  PN +TY  +  GLCR      A   FEEM                      G+   V
Sbjct: 5   GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 64

Query: 56  CK----------P-NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
            +          P N +TY  +I GLCK G ++KA E+   M      PN  T+  LI G
Sbjct: 65  LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 124

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           +C  ++   A  L  EM  + + P+ VS+  ++N LC    +  A++LLE M   G++PN
Sbjct: 125 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 184

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             VY+TL+ G+   GR+  A  L   M   G   ++F Y+ +I+   K  ++E A +   
Sbjct: 185 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLL 244

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E+  +G+KPD V +    +G  +  ++  A K FDEM  HG+  +   Y   I+G  K G
Sbjct: 245 EIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAG 304

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            ++EA+ +FR L  L    D++  +  I GL K+GR++ A ++F  L    L+ DV TY+
Sbjct: 305 NLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYS 364

Query: 345 IMIHALCADGKMDKARDLFLDM 366
            +I   C  G+++KA +L  +M
Sbjct: 365 SLISGFCKQGEVEKAFELHDEM 386



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 194/380 (51%), Gaps = 24/380 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA ++F  L   G  P+V T +  I+GL + G    AL +F E+     E G+V  P+ 
Sbjct: 307 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK----EKGLV--PDV 360

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY+++I G CK+G V+KA EL  +M  + I PN+  YN+L+ G C + D   A+ LF  
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++P+ V+++ +++  CK+  + EA  L   M   GV+P++FVYN L+ G C  G 
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A  LF  M   G      S++ LI+GYCK+ +I+ A  L+ EM++K I PD V Y T
Sbjct: 481 MEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539

Query: 241 LFIG------------LFEIHQ-----VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           +               LF+  Q     V+  F LF++M   GV  D   Y   I   CK 
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
             +VEA +L   +           ++ LI  LCK   L  A +L   +    L   +   
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAAC 659

Query: 344 NIMIHALCADGKMDKARDLF 363
           + ++ +    GKMD+A  +F
Sbjct: 660 STLVRSFHEAGKMDEATRVF 679



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 194/378 (51%), Gaps = 24/378 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +L+  G  P+VFTY++LI+G C+ G    A  L +EM       G+   PN  
Sbjct: 343 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK----GIA--PNIF 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  ++DGLCK G + +A++LF  M ++ + P+ VTY+++I G+C + +  EA  LF EM
Sbjct: 397 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 456

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GVQP+   +N +++  CK G M++A  L   M+Q G       +NTL+DG+C + ++
Sbjct: 457 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 515

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA-----------------LSLYS 224
             A +LF  M +     +  +Y+ +I+ +CK  ++E A                  +L+ 
Sbjct: 516 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFE 575

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M++KG+KPD V Y  +     +   +  AFKL DE+   G+      +   I  LCK  
Sbjct: 576 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 635

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + EA +L   +  L  +  + A + L+    ++G++  A  +F  +    L+ D  T  
Sbjct: 636 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 695

Query: 345 IMIHALCADGKMDKARDL 362
            +++    D   + AR+L
Sbjct: 696 DLVNGNLNDTDSEDARNL 713



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/355 (30%), Positives = 177/355 (49%), Gaps = 37/355 (10%)

Query: 50  GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
           GE G+V  PNT TYT I  GLC+   +++AK  F +M+   + P+    ++LI GF    
Sbjct: 2   GEKGLV--PNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 59

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
           D +E   +   M+  G+  N++++NV+++ LCK GKM++A+ +L+ MI +G +PN+  + 
Sbjct: 60  DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L++G+C    + RA EL   ME      +  SY  +ING C  K++  A  L  +M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR--------------- 274
           G+KP+VV+Y+TL +G     ++E A +L D M   GVA D + Y                
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 275 --------------------TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
                                FI G  K G + EA + F  +       +   Y  LI+G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             K+G L  A  +FR L    ++ DV T +  IH L  +G++ +A  +F +++ K
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 135/281 (48%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M ++ + PN  TY  +  G C A   NEAK  F EM   G++P+  + + +++   + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +DE  R+ ++M+  G+  N   YN L+ G C  G++ +A E+   M ++GCK N  ++ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI GYC+   +  AL L  EM  + + P  V Y  +  GL     +  A KL ++M   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +   Y T I G    G I EA  L   +       DI  YN +I  L K+G+++ A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                +    L  D VT+   I      GKM +A   F +M
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 281



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 125/249 (50%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ PN  ++ +I   LC+  +M+EA    E M + G++P+    + L+DGF   G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++    +   M S G   N+ +Y++LI+G CK  ++E A  +   M++ G KP+   +  
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G    H + RA +L DEM++  +     +Y   I+GLC    +  A +L   +    
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + ++  Y+ LI G    GR++ A  L   +    +  D+  YN +I  L   GKM++A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 361 DLFLDMEAK 369
              L+++ +
Sbjct: 241 TYLLEIQGR 249



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 24/277 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF ++   G +P+ F YN L++G C+ G    A+NLF EM      F       T+
Sbjct: 448 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG--FAT-----TL 500

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ T+IDG CK   + +A +LF +M  + I P+ VTY ++I   C A    EA  LF EM
Sbjct: 501 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 560

Query: 122 MD-----------------QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            +                 +GV+P+ V++ +++   CK   + EA +L + ++  G+   
Sbjct: 561 QERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 620

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +++ L+   C    +  A +L   M  +G K ++ + S L+  + +  +++ A  ++ 
Sbjct: 621 GTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFE 680

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            + S G+ PD      L  G       E A  L  ++
Sbjct: 681 GVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/395 (33%), Positives = 211/395 (53%), Gaps = 33/395 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F K+ V GC PN F++  L+ G CR G ++ AL    E+ +G G FGV  +PN V
Sbjct: 169 DAREVFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRAL----ELLDGMGSFGV--QPNKV 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I   C+EG  ++A+ L  +M+++ + P+VVT+NS I   C A    EA  +F +M
Sbjct: 223 IYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDM 282

Query: 122 -MDQGV---QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            +D+ +   +PN+ +FN+++   CK G ++EA  L+E M + G       YN  + G   
Sbjct: 283 QIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVR 342

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++  A+     M   G + N++S++ +++G CKN  I  A  +   M+S GI PD V 
Sbjct: 343 NGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVT 402

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+TL  G     +V +A  +  EM R G + +T+     +  L K G I EA +L + + 
Sbjct: 403 YSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMN 462

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFR------SLPRGVL--------------- 336
              Y+LD    N +IDGLCKSG+L  A E+        S   G L               
Sbjct: 463 ERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGK 522

Query: 337 --IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + D++TY+I+I+ LC  G++D+AR  F++M  K
Sbjct: 523 KCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGK 557



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 125/396 (31%), Positives = 189/396 (47%), Gaps = 33/396 (8%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A  L   +  FG +PN   YNTLI+  CR G    A  L E M   +G F     P+ 
Sbjct: 203 MRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMRE-DGLF-----PDV 256

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMK-DENI---NPNVVTYNSLIHGFCYANDWNEAKC 116
           VT+ + I  LC  G + +A  +F  M+ DE +    PN+ T+N ++ GFC      EAK 
Sbjct: 257 VTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKT 316

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   M   G    + S+N+ +  L +NGK+ EA   L+ M+  G+ PN + +NT+MDG C
Sbjct: 317 LVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLC 376

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G ++ A  +   M S G   +  +YS L++G C   ++  A ++  EM+ +G  P+  
Sbjct: 377 KNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTY 436

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             N L   L++  ++  A KL  +M       D       IDGLCK+G + EAVE+   +
Sbjct: 437 TCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM 496

Query: 297 RI-----------------------LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            I                        K   D+  Y+ +I+GLCK+GRL  A + F  +  
Sbjct: 497 WIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVG 556

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L  D + Y+  IH+ C  GK+  A  +  DME +
Sbjct: 557 KSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKR 592



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 197/426 (46%), Gaps = 60/426 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++R  G  P+V T+N+ I+ LC  G  + A  +F +M   + E G+  +PN  
Sbjct: 239 EAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQI-DEELGLP-RPNIT 296

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++G CKEG +++AK L   MK       + +YN  + G        EA+    EM
Sbjct: 297 TFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEM 356

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G++PN+ SFN +M+ LCKNG + +A  ++ LMI  G+ P+   Y+TL+ G C TG+V
Sbjct: 357 VDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKV 416

Query: 182 NRAEELFVSMESMGCKHNVFSYSIL----------------------------------- 206
            +A  +   M   GC  N ++ +IL                                   
Sbjct: 417 LKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIV 476

Query: 207 INGYCKNKEIEGALSLYSEML---------------------SKGIK--PDVVIYNTLFI 243
           I+G CK+ +++ A+ +   M                      S G K  PD++ Y+ +  
Sbjct: 477 IDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIIN 536

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GL +  +++ A K F EM    +  D+  Y TFI   CK+G I  A  + + +       
Sbjct: 537 GLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNK 596

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ++ YN LI GL    ++   + L   +    +  ++ TYN MI  LC  G++  A  L 
Sbjct: 597 SLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLL 656

Query: 364 LDMEAK 369
            +M  K
Sbjct: 657 DEMLQK 662



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 36/379 (9%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TY+TL++G C TG  + A N+  EM          C PNT T   ++  L KE
Sbjct: 395 GIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRG------CSPNTYTCNILLHSLWKE 448

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL---------------- 117
           G + +A++L  KM + + + + VT N +I G C +   +EA  +                
Sbjct: 449 GRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLG 508

Query: 118 --FIEMMDQGVQ-----PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
             FI ++D         P+++++++I+N LCK G++DEA +    M+   + P++ +Y+T
Sbjct: 509 NSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDT 568

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
            +  FC  G+++ A  +   ME  GC  ++ +Y+ LI G     +I     L  +M  KG
Sbjct: 569 FIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKG 628

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN---GYIV 287
           I P++  YN +   L E  +++ A  L DEM + G++ +  ++R  I   CK    G + 
Sbjct: 629 ITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVK 688

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           E  E+  ++   K  L    Y+ + + L   G +  A ELF +            YN +I
Sbjct: 689 EVFEIALSICGHKEAL----YSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLI 744

Query: 348 HALCADGKMDKARDLFLDM 366
             LC D  ++ A D+   M
Sbjct: 745 EKLCKDEMLENASDILHKM 763



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 183/387 (47%), Gaps = 32/387 (8%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           +EA     ++   G EPN++++NT+++GLC+ G    A  +   M ++G G       P+
Sbjct: 347 LEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIG-------PD 399

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TVTY+T++ G C  G V KA  +  +M     +PN  T N L+H         EA+ L  
Sbjct: 400 TVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQ 459

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR----------------- 162
           +M ++    + V+ N++++ LCK+GK+DEA  ++E M   G                   
Sbjct: 460 KMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFIGLVDSSS 519

Query: 163 ------PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
                 P+   Y+ +++G C  GR++ A + F+ M       +   Y   I+ +CK+ +I
Sbjct: 520 NGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKI 579

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             A  +  +M  +G    +  YN+L +GL   +Q+   + L D+M+  G+  +   Y   
Sbjct: 580 SSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNM 639

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I  LC+ G I +A  L   +       +I ++  LI   CK+    +  E+F  +   + 
Sbjct: 640 ISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE-IALSIC 698

Query: 337 IADVVTYNIMIHALCADGKMDKARDLF 363
                 Y++M + L   G++ +A++LF
Sbjct: 699 GHKEALYSLMFNELLIGGEVSEAKELF 725



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 174/348 (50%), Gaps = 10/348 (2%)

Query: 24  TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV-TYTTIIDGLCKEGFVDKAKEL 82
            LI  L ++G + +A + F+   +      V   P  V  Y  +++   +E  VD    L
Sbjct: 84  ALIRILAKSGLSDLAFSQFQSFRSQ-----VPANPPPVYLYNMVLESSLREDKVDSFSWL 138

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           +  M    ++P   T N LI G C +  + +A+ +F +M  +G +PN  SF +++   C+
Sbjct: 139 YKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGILVRGYCR 198

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
            G    A  LL+ M   GV+PN  +YNTL+  FC  GR   AE L   M   G   +V +
Sbjct: 199 AGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVT 258

Query: 203 YSILINGYCKNKEIEGALSLYSEML---SKGI-KPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++  I+  C   +I  A  ++ +M      G+ +P++  +N +  G  +   +E A  L 
Sbjct: 259 FNSRISALCSAGKILEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLV 318

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           + M+R+G   +  +Y  ++ GL +NG ++EA    + +     E +I ++N ++DGLCK+
Sbjct: 319 ESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKN 378

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G +  A  +   +    +  D VTY+ ++H  C+ GK+ KA ++  +M
Sbjct: 379 GLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEM 426



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 167/346 (48%), Gaps = 24/346 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM--------AN-GNGEF 52
           EA  L  K+     + +  T N +I+GLC++G    A+ + E M         N GN   
Sbjct: 453 EAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFI 512

Query: 53  GVV--------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           G+V        C P+ +TY+ II+GLCK G +D+A++ F++M  ++++P+ + Y++ IH 
Sbjct: 513 GLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHS 572

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           FC     + A  +  +M  +G   ++ ++N ++  L    ++ E   LL+ M + G+ PN
Sbjct: 573 FCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPN 632

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN ++   C  GR+  A  L   M   G   N+ S+ +LI  +CK  +      ++ 
Sbjct: 633 ICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE 692

Query: 225 EMLSK-GIKPDV--VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
             LS  G K  +  +++N L IG     +V  A +LFD           + Y   I+ LC
Sbjct: 693 IALSICGHKEALYSLMFNELLIG----GEVSEAKELFDAALDRCFDLGNFQYNDLIEKLC 748

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
           K+  +  A ++   +    Y  D  ++  +IDGL K G+   A EL
Sbjct: 749 KDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADEL 794



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/326 (21%), Positives = 117/326 (35%), Gaps = 87/326 (26%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P++ TY+ +INGLC+ G    A   F EM       G    P+++ Y T I   CK G
Sbjct: 524 CLPDLITYSIIINGLCKAGRLDEARKKFIEMV------GKSLHPDSIIYDTFIHSFCKHG 577

Query: 75  FVDKAKE-----------------------------------LFLKMKDENINPNVVTYN 99
            +  A                                     L   MK++ I PN+ TYN
Sbjct: 578 KISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYN 637

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK----------------- 142
           ++I   C      +A  L  EM+ +G+ PN+ SF +++   CK                 
Sbjct: 638 NMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSI 697

Query: 143 -----------------NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
                             G++ EA  L +  +        F YN L++  C    +  A 
Sbjct: 698 CGHKEALYSLMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENAS 757

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++   M   G + +  S+  +I+G  K  +   A  L   M+    +           G+
Sbjct: 758 DILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASE-----------GM 806

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTW 271
            E +++ R    F+  +R+  +   W
Sbjct: 807 VE-NKITRNESAFNRQKRNKFSGSDW 831



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 40/218 (18%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  ++ TYN+LI GL           L ++M     E G+   PN  TY  +I  LC+ 
Sbjct: 593 GCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMK----EKGIT--PNICTYNNMISCLCEG 646

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW---------------------- 111
           G +  A  L  +M  + I+PN+ ++  LI  FC A+D+                      
Sbjct: 647 GRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSICGHKEALYS 706

Query: 112 ------------NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
                       +EAK LF   +D+        +N ++ +LCK+  ++ AS +L  MI  
Sbjct: 707 LMFNELLIGGEVSEAKELFDAALDRCFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDK 766

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           G R +   +  ++DG    G+ + A+EL   M  M  +
Sbjct: 767 GYRFDPASFMPVIDGLGKRGKKHDADELAERMMDMASE 804


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/394 (34%), Positives = 198/394 (50%), Gaps = 46/394 (11%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L+  ++  G  PNVFTYN L+  LC+      A  LF EM+N        C P+ VTYT
Sbjct: 165 PLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKG------CPPDAVTYT 218

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++  LCK G +D A+EL  + K     P+V  YN+LI G C       A  L  EMMD 
Sbjct: 219 TMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDN 273

Query: 125 GVQPNVVSFNVIMNELCKN-----------------------------------GKMDEA 149
           GV PNVVS++ I+N LC +                                   GK+ EA
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEA 333

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             L +LMIQ G  PN   YNTL+ G C  G +  A ++   M+  GC  NV +YSILI+G
Sbjct: 334 LDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDG 393

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           + K+ ++ GA   ++ M+S G +P+VV Y  +   L +    ++A  L ++M   G   +
Sbjct: 394 FAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPN 453

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
           T  + TFI GLC NG +  A++L   ++      +I  YN L+D L +  + + A+ LF+
Sbjct: 454 TITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQ 513

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +    L  ++VTYN +++     G M +A  LF
Sbjct: 514 EIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLF 547



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 166/339 (48%), Gaps = 7/339 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV +Y+ +IN LC +G+  +A  LF +M      F   C  N  T+T +I G    
Sbjct: 274 GVDPNVVSYSCIINSLCVSGNVELAFALFAQM------FLRGCDANIHTFTPLIKGCFMR 327

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A +L+  M  +   PNVV YN+LIHG C      EA  +  +M   G  PNV ++
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++   K+G +  AS     MI  G RPN   Y  ++D  C     ++A  L   M  
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  N  +++  I G C N  +E A+ L   M   G  P++  YN L   LF +++ E 
Sbjct: 448 EGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF LF E++   +  +   Y T + G  + G + EA++LF    +     D   YN +I 
Sbjct: 508 AFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIH 567

Query: 314 GLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALC 351
             CK G++KIA +L  R         D++TY  +I   C
Sbjct: 568 AYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGAC 606



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 157/348 (45%), Gaps = 42/348 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+  +   GCEPNV  YNTLI+GLC  G    AL + ++M          C PN  
Sbjct: 332 EALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSG------CLPNVT 385

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDG  K G +  A E + +M      PNVVTY  ++   C  + +++A  L  +M
Sbjct: 386 TYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKM 445

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN ++FN  +  LC NG+++ A +LLE M   G  PN   YN L+D      R+
Sbjct: 446 TLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALF---RM 502

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+ EE F                                 L+ E+ ++ ++P++V YNT+
Sbjct: 503 NKYEEAF--------------------------------GLFQEIEARNLQPNLVTYNTV 530

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK- 300
             G      +  A +LF +    G A D+  Y T I   CK G +  A +L   +  +K 
Sbjct: 531 LYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE 590

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           +  DI  Y  LI G C    ++ A           +  +  T+N ++ 
Sbjct: 591 WHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVR 638



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 158/321 (49%), Gaps = 10/321 (3%)

Query: 39  LNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY 98
           L  F  +AN N       +    TY  +I+ L +E  +D  + +  +MK + IN     +
Sbjct: 58  LGFFSAIANSNA-----FQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLF 112

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
             +I+G+       +A  +F  + + G +P V  +N +++ L    K    + L   M +
Sbjct: 113 ICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK 172

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PN F YN L+   C   RV+ A +LFV M + GC  +  +Y+ +++  CK  +I+ 
Sbjct: 173 DGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDD 232

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L         KP V +YN L  G+ +  ++E A KL  EM  +GV  +  +Y   I+
Sbjct: 233 ARELAGR-----FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIIN 287

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            LC +G +  A  LF  + +   + +I  +  LI G    G+L  A +L++ + +     
Sbjct: 288 SLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEP 347

Query: 339 DVVTYNIMIHALCADGKMDKA 359
           +VV YN +IH LC++G +++A
Sbjct: 348 NVVAYNTLIHGLCSNGSLEEA 368



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 135/264 (51%), Gaps = 7/264 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+  + ++   GC PNV TY  +++ LC+      A +L E+M          C PNT+T
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG------CTPNTIT 456

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T I GLC  G V+ A +L  +M+     PN+ TYN L+      N + EA  LF E+ 
Sbjct: 457 FNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIE 516

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + +QPN+V++N ++    + G M EA +L    +  G  P++  YNT++  +C  G+V 
Sbjct: 517 ARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVK 576

Query: 183 RAEELFVSMESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A +L   + SM   H ++ +Y+ LI G C    IE A++   + +++GI P+   +N L
Sbjct: 577 IAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG 265
               F+         + D++ R G
Sbjct: 637 VRCFFDSLGHMGPIHILDDILRKG 660



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K  V G  P+  TYNT+I+  C+ G   +A  L E +++   E+     P+ +
Sbjct: 542 EALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMK-EW----HPDII 596

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           TYT++I G C    +++A     K  ++ I PN  T+N+L+  F
Sbjct: 597 TYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCF 640



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 60/113 (53%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  +M+  G+      +   I+G  + G   +A+++F  +     +  +R YN L+D L 
Sbjct: 96  ILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALL 155

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              + ++   L+ ++ +  LI +V TYNI++ ALC + ++D A  LF++M  K
Sbjct: 156 SENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNK 208


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 198/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++  G  P + T N+L++   +   T  A  L+ EM      F +  K +  
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM------FRLRIKSSVY 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+ LCKEG + KAK+    M+   + PN+VTYN+++HG+C +     A  +   M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q ++P+  ++  +++ +CK G+++EAS++ E M+Q G+RP+A +YNTL+DGFC  G +
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M   G    + +Y+ LI+     +  + A  +  E+  KGI PD + YN L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G       ++AF L DEM   G+      Y + +  L K   + EA +LF+ +     
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  +N LIDG C +  +K A+EL + + R  +  D VT+N ++   C +GK+++AR+
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 362 LFLDMEAK 369
           LF +M+ +
Sbjct: 523 LFDEMKRR 530



 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 182/349 (52%), Gaps = 6/349 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A+   ++    EP+ FTY +LI+G+C+ G    A  +FEEM           +P+ V 
Sbjct: 275 ADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG------LRPSAVI 328

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C +G +D A     +M  + I+P + TYNSLIH        +EA+C+  E+ 
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P+ +++N+++N  C+     +A  L + M+  G++P    Y +L+       R+ 
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++LF  + S G   +V  ++ LI+G+C N  ++GA  L  +M    + PD V +NT+ 
Sbjct: 449 EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     +VE A +LFDEM+R G+  D  ++ T I G  + G I +A  +   +    + 
Sbjct: 509 QGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFN 568

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
             +  YN L+ GLCK+    +A EL + +    +  D  TY  +I  + 
Sbjct: 569 PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 136/249 (54%), Gaps = 8/249 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +  +++  G  P+  TYN LING CR  +   A  L +EM A+G        KP  
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG-------IKPTK 431

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TYT+++  L K+  + +A +LF K+  E + P+V+ +N+LI G C  ++   A  L  +
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    V P+ V+FN IM   C+ GK++EA  L + M + G++P+   +NTL+ G+   G 
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  +   M   G    V +Y+ L+ G CKN+E + A  L  EM+SKG+ PD   Y T
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 241 LFIGLFEIH 249
           L  G+ +++
Sbjct: 612 LIEGIAKVN 620



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 17/267 (6%)

Query: 118 FIEMMDQGVQPNVVSFNVI-MNELCK---------NGKMDEASRLLELMIQIGVRPNAFV 167
           FI+ ++  + P+++S  ++ ++E  +         + K+ +A  L   ++ +   P+   
Sbjct: 56  FIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKP 115

Query: 168 YNTLMDGFCLTGRVNRAEELF----VSMESMGCKHN-VFSYSILINGYCKNKEIEGALSL 222
              L+      G  N   E+F     S + +G K + VF Y  LI   C     + A   
Sbjct: 116 ALHLLKQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDY--LIKSCCDMNRADEAFEC 173

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +  M  KG+ P +   N+L     ++++ E A+ L+ EM R  + +  + +   I+ LCK
Sbjct: 174 FYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCK 233

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + +A +    +     + +I  YN ++ G C SGR++ A  +  ++ R  +  D  T
Sbjct: 234 EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT 293

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           Y  +I  +C  G++++A  +F +M  K
Sbjct: 294 YGSLISGMCKQGRLEEASKIFEEMVQK 320



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 41/182 (22%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G  P+V  +N LI+G C   +   A  L ++M        +   P+ V
Sbjct: 449 EADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDR------MKVPPDEV 502

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMK---------------------------------- 87
           T+ TI+ G C+EG V++A+ELF +MK                                  
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562

Query: 88  -DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
            D   NP V+TYN+L+ G C   + + A+ L  EM+ +G+ P+  ++  ++  + K    
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622

Query: 147 DE 148
           DE
Sbjct: 623 DE 624



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++  G +P+  ++NTLI+G  R G    A  +  EM +          P  +
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG------FNPTVL 572

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           TY  ++ GLCK    D A+EL  +M  + + P+  TY +LI G    N  +E K
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 197/365 (53%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +   K+   G EP++ T+ +L+NG C       A++L +++       G+  +PN V 
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV------GLGYEPNVVI 186

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIID LC++G V+ A ++   MK   I P+VVTYNSLI    ++  W  +  +  +MM
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+V++F+ +++   K G++ EA +    MIQ  V PN   YN+L++G C+ G ++
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+++   + S G   N  +Y+ LINGYCK K ++  + +   M   G+  D   YNTL+
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  +   A K+   M   GV  D + +   +DGLC +G I +A+     L+  K  
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           + I  YN +I GLCK+ +++ AW LF SL    +  DV+TY  M+  L       +A +L
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486

Query: 363 FLDME 367
           +  M+
Sbjct: 487 YRKMQ 491



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF  L + G   +++++ TLI+  CR     +AL+   +M     E      P+ VT+ 
Sbjct: 100 SLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFE------PSIVTFG 153

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++++G C      +A  L  ++      PNVV YN++I   C     N A  +   M   
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++P+VV++N ++  L  +G    ++R+L  M+++G+ P+   ++ L+D +   G++  A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           ++ +  M       N+ +Y+ LING C +  ++ A  + + ++SKG  P+ V YNTL  G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  +V+   K+   M R GV  DT+ Y T   G C+ G    A ++   +       D
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  +N L+DGLC  G++  A      L +   +  ++TYNI+I  LC   K++ A  LF 
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453

Query: 365 DMEAK 369
            +  K
Sbjct: 454 SLALK 458



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 175/367 (47%), Gaps = 10/367 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-HTIV---ALNLFEEMANGNGEFGVVC 56
           +E   L   L +  C    F+  +      R+G H+I    AL LF +MA  +       
Sbjct: 22  LEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHP------ 75

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            P+ V ++ ++  + K    +    LF  ++   I+ ++ ++ +LI  FC     + A  
Sbjct: 76  LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
              +MM  G +P++V+F  ++N  C   +  EA  L++ ++ +G  PN  +YNT++D  C
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G+VN A ++   M+ MG + +V +Y+ LI     +     +  + S+M+  GI PDV+
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            ++ L     +  Q+  A K ++EM +  V  +   Y + I+GLC +G + EA ++   L
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               +  +   YN LI+G CK+ R+    ++   + R  +  D  TYN +    C  GK 
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375

Query: 357 DKARDLF 363
             A  + 
Sbjct: 376 SAAEKVL 382



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 109/222 (49%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K ++A  L   M +    P+   ++ L+       +      LF  +E +G  H+++S++
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+ +C+   +  ALS   +M+  G +P +V + +L  G   +++   A  L D++   
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   +   Y T ID LC+ G +  A+++ + ++ +    D+  YN LI  L  SG   ++
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             +   + R  +  DV+T++ +I     +G++ +A+  + +M
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+++T+N L++GLC  G    AL   E++       G++      TY  II GLCK 
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII------TYNIIIKGLCKA 442

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQP 128
             V+ A  LF  +  + ++P+V+TY +++ G      W EA  L+ +M  + G+ P
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 194/364 (53%), Gaps = 9/364 (2%)

Query: 5   ALFMKLRVFGC-EP-NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AL +K  +  C +P N+    +L+ G C  G+   ALNLF ++   +G F     PN VT
Sbjct: 349 ALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE-DGLF-----PNKVT 402

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +I+G C  G ++KA EL+ +MK   I P+V   NSL+ G+  A  W EA  LF E +
Sbjct: 403 YSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV 462

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D GV  N+ ++N++M+ LCK GKMDEA  LL+ M+  G+ PN   YN ++ G C  G ++
Sbjct: 463 DCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMD 521

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +F  M +   K NV +YSILI+G  K  + E AL L+ +MLS  I P    +NT+ 
Sbjct: 522 MASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTII 581

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL ++ Q+  A          G       Y + +DG  K G I  A+ ++R +      
Sbjct: 582 NGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 641

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  Y  LI+G CKS R+ +A +    +    L  DV  Y+ +I   C    M+ A+DL
Sbjct: 642 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 701

Query: 363 FLDM 366
           F ++
Sbjct: 702 FFEL 705



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 199/365 (54%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L   +   G  PNV +YN +I G CR G+  +A ++F +M           KPN V
Sbjct: 487 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM------LARDLKPNVV 540

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDG  K+G  +KA +LF +M   NI P   T+N++I+G C     +EA+      
Sbjct: 541 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 600

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+ +++N I++   K G +D A  +   M + GV PN   Y +L++GFC + R+
Sbjct: 601 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 660

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +    M   G + +V +YS LI+G+CK +++E A  L+ E+L  G+ P+ ++YN++
Sbjct: 661 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 720

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +++ +E A   + +M    +  D   Y T IDGL K G +V A +L+  +     
Sbjct: 721 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 780

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  ++ L++GLC  G+L+ A ++   + R  +   V+ YN +I     +G + +A  
Sbjct: 781 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 840

Query: 362 LFLDM 366
           L  +M
Sbjct: 841 LHDEM 845



 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 200/368 (54%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ LF +    G   N+FTYN +++ LC+ G    A +L + M N     G+V  PN V
Sbjct: 453 EASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ----GMV--PNVV 505

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I G C++G +D A  +F  M   ++ PNVVTY+ LI G     D  +A  LF +M
Sbjct: 506 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 565

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P   +FN I+N LCK G+M EA   L+  ++ G  P+   YN+++DGF   G +
Sbjct: 566 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 625

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  ++  M   G   NV +Y+ LING+CK+  I+ AL    EM  KG++ DV  Y+ L
Sbjct: 626 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 685

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +E A  LF E+   G++ +   Y + I G      +  A+  ++ +   + 
Sbjct: 686 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 745

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  Y  LIDGL K GRL  A +L+  +    ++ D++T++++++ LC  G+++ AR 
Sbjct: 746 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 805

Query: 362 LFLDMEAK 369
           +  +M+ K
Sbjct: 806 ILEEMDRK 813



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 187/360 (51%), Gaps = 11/360 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+++F  +     +PNV TY+ LI+G  + G +  AL+LF++M + N        P   T
Sbjct: 523 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN------IAPTDFT 576

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + TII+GLCK G + +A++      +E   P+ +TYNS++ GF    + + A  ++ EM 
Sbjct: 577 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 636

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + GV PNVV++  ++N  CK+ ++D A +  + M + G+  +   Y+ L+DGFC    + 
Sbjct: 637 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 696

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++LF  +  +G   N   Y+ +I+G+     +E AL  Y +M++  I  D+  Y TL 
Sbjct: 697 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 756

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  ++  A  L+ EM   G+  D   +   ++GLC  G +  A ++   +      
Sbjct: 757 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 816

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  YN LI G  + G LK A+ L   +    L+ D VTY+I+I     +GK    R L
Sbjct: 817 PSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI-----NGKFKGDRSL 871



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 148/305 (48%), Gaps = 1/305 (0%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   ++    KEG V++A+E F + K+  +  +   Y+ +I   C   + N    L  EM
Sbjct: 262 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P+  +F  ++      G M EA RL E MI  G   N  V  +LM G+C  G +
Sbjct: 322 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  +   G   N  +YS+LI G C +  IE A  LY++M   GI P V   N+L
Sbjct: 382 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    E A KLFDE    GV A+ + Y   +  LCK G + EA  L   +     
Sbjct: 442 LRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 500

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ +YN +I G C+ G + +A  +F  +    L  +VVTY+I+I      G  +KA D
Sbjct: 501 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 560

Query: 362 LFLDM 366
           LF  M
Sbjct: 561 LFDQM 565


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/364 (35%), Positives = 194/364 (53%), Gaps = 9/364 (2%)

Query: 5   ALFMKLRVFGC-EP-NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AL +K  +  C +P N+    +L+ G C  G+   ALNLF ++   +G F     PN VT
Sbjct: 309 ALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKITE-DGLF-----PNKVT 362

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +I+G C  G ++KA EL+ +MK   I P+V   NSL+ G+  A  W EA  LF E +
Sbjct: 363 YSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAV 422

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D GV  N+ ++N++M+ LCK GKMDEA  LL+ M+  G+ PN   YN ++ G C  G ++
Sbjct: 423 DCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMD 481

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +F  M +   K NV +YSILI+G  K  + E AL L+ +MLS  I P    +NT+ 
Sbjct: 482 MASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTII 541

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL ++ Q+  A          G       Y + +DG  K G I  A+ ++R +      
Sbjct: 542 NGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVS 601

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  Y  LI+G CKS R+ +A +    +    L  DV  Y+ +I   C    M+ A+DL
Sbjct: 602 PNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDL 661

Query: 363 FLDM 366
           F ++
Sbjct: 662 FFEL 665



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 199/365 (54%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L   +   G  PNV +YN +I G CR G+  +A ++F +M           KPN V
Sbjct: 447 EACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM------LARDLKPNVV 500

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDG  K+G  +KA +LF +M   NI P   T+N++I+G C     +EA+      
Sbjct: 501 TYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNF 560

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+ +++N I++   K G +D A  +   M + GV PN   Y +L++GFC + R+
Sbjct: 561 LEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRI 620

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +    M   G + +V +YS LI+G+CK +++E A  L+ E+L  G+ P+ ++YN++
Sbjct: 621 DLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSM 680

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +++ +E A   + +M    +  D   Y T IDGL K G +V A +L+  +     
Sbjct: 681 ISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGI 740

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  ++ L++GLC  G+L+ A ++   + R  +   V+ YN +I     +G + +A  
Sbjct: 741 VPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFT 800

Query: 362 LFLDM 366
           L  +M
Sbjct: 801 LHDEM 805



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 200/368 (54%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ LF +    G   N+FTYN +++ LC+ G    A +L + M N     G+V  PN V
Sbjct: 413 EASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ----GMV--PNVV 465

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I G C++G +D A  +F  M   ++ PNVVTY+ LI G     D  +A  LF +M
Sbjct: 466 SYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQM 525

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   + P   +FN I+N LCK G+M EA   L+  ++ G  P+   YN+++DGF   G +
Sbjct: 526 LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNI 585

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  ++  M   G   NV +Y+ LING+CK+  I+ AL    EM  KG++ DV  Y+ L
Sbjct: 586 DSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSAL 645

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +E A  LF E+   G++ +   Y + I G      +  A+  ++ +   + 
Sbjct: 646 IDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRI 705

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  Y  LIDGL K GRL  A +L+  +    ++ D++T++++++ LC  G+++ AR 
Sbjct: 706 PCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARK 765

Query: 362 LFLDMEAK 369
           +  +M+ K
Sbjct: 766 ILEEMDRK 773



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 183/347 (52%), Gaps = 6/347 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+++F  +     +PNV TY+ LI+G  + G +  AL+LF++M + N        P   T
Sbjct: 483 ASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLN------IAPTDFT 536

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + TII+GLCK G + +A++      +E   P+ +TYNS++ GF    + + A  ++ EM 
Sbjct: 537 FNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMC 596

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + GV PNVV++  ++N  CK+ ++D A +  + M + G+  +   Y+ L+DGFC    + 
Sbjct: 597 EFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDME 656

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++LF  +  +G   N   Y+ +I+G+     +E AL  Y +M++  I  D+  Y TL 
Sbjct: 657 SAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLI 716

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  ++  A  L+ EM   G+  D   +   ++GLC  G +  A ++   +      
Sbjct: 717 DGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMT 776

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
             +  YN LI G  + G LK A+ L   +    L+ D VTY+I+I+ 
Sbjct: 777 PSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILING 823



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/305 (32%), Positives = 148/305 (48%), Gaps = 1/305 (0%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   ++    KEG V++A+E F + K+  +  +   Y+ +I   C   + N    L  EM
Sbjct: 222 TVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEM 281

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P+  +F  ++      G M EA RL E MI  G   N  V  +LM G+C  G +
Sbjct: 282 KERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNL 341

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  +   G   N  +YS+LI G C +  IE A  LY++M   GI P V   N+L
Sbjct: 342 DSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    E A KLFDE    GV A+ + Y   +  LCK G + EA  L   +     
Sbjct: 402 LRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGM 460

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ +YN +I G C+ G + +A  +F  +    L  +VVTY+I+I      G  +KA D
Sbjct: 461 VPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALD 520

Query: 362 LFLDM 366
           LF  M
Sbjct: 521 LFDQM 525


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 200/399 (50%), Gaps = 30/399 (7%)

Query: 1   MEAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--- 56
           ME AA  +K +   GC+PN  T+  LI G CR  +   AL L +EM   N     V    
Sbjct: 295 MEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 354

Query: 57  --------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                                     KPN V Y+T+I G   EG +++A+ L   M    
Sbjct: 355 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSG 414

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P++  YN++I     A    EA    +E+  +G++P+ V+F   +    K GKM EA+
Sbjct: 415 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 474

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +  + M+  G+ PN  +Y  L++G    G +  A  +F  + ++G   +V + S  I+G 
Sbjct: 475 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGL 534

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            KN  ++ AL ++SE+  KG+ PDV  Y++L  G  +  +VE+AF+L DEM   G+A + 
Sbjct: 535 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 594

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + Y   +DGLCK+G I  A +LF  +     E D   Y+ +IDG CKS  +  A+ LF  
Sbjct: 595 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 654

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +P   +      YN ++H  C +G M+KA +LF +M  K
Sbjct: 655 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 693



 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 203/368 (55%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+   ++++  G +P+  T+   I G  +TG    A   F+EM     + G++  PN  
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML----DHGLM--PNNP 490

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +I+G  K G + +A  +F  +    + P+V T ++ IHG        EA  +F E+
Sbjct: 491 LYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 550

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V +++ +++  CK G++++A  L + M   G+ PN F+YN L+DG C +G +
Sbjct: 551 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 610

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA +LF  M   G + +  +YS +I+GYCK++ +  A SL+ EM SKG++P   +YN L
Sbjct: 611 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 670

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +E+A  LF EM + G A  T ++ T IDG CK+  I EA +LF+ +   + 
Sbjct: 671 VHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 729

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y  +ID  CK+G+++ A  LF+ +    LI D VTY  +++     G+  +   
Sbjct: 730 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 789

Query: 362 LFLDMEAK 369
           LF  M AK
Sbjct: 790 LFEKMVAK 797



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   N+ TYN LI+GLC+ G    A  + +      G   + CKPN+ T+  +I+G C+E
Sbjct: 274 GIPINLITYNVLIHGLCKFGKMEKAAEILK------GMITLGCKPNSRTFCLLIEGYCRE 327

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A EL  +M+  N+ P+ V+Y ++I+G C+  D + A  L  +M   G++PNVV +
Sbjct: 328 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 387

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++      G+++EA RLL+ M   GV P+ F YN ++      G++  A    + ++ 
Sbjct: 388 STLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 447

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K +  ++   I GY K  ++  A   + EML  G+ P+  +Y  L  G F+   +  
Sbjct: 448 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 507

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +F  +   GV  D      FI GL KNG + EA+++F  L+      D+  Y+ LI 
Sbjct: 508 ALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 567

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G CK G ++ A+EL   +    +  ++  YN ++  LC  G + +AR LF  M  K
Sbjct: 568 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 623



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 194/366 (53%), Gaps = 7/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA ++F  L   G  P+V T +  I+GL + G    AL +F E+     E G+V  P+ 
Sbjct: 506 MEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK----EKGLV--PDV 559

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY+++I G CK+G V+KA EL  +M  + I PN+  YN+L+ G C + D   A+ LF  
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++P+ V+++ +++  CK+  + EA  L   M   GV+P++FVYN L+ G C  G 
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A  LF  M   G      S++ LI+GYCK+ +I+ A  L+ EM++K I PD V Y T
Sbjct: 680 MEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +     +  ++E A  LF EMQ   +  DT  Y + + G  K G   E   LF  +    
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 798

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D   Y  +I   CK   L  A++L   +    ++     ++++I ALC    + +A 
Sbjct: 799 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 858

Query: 361 DLFLDM 366
            L  +M
Sbjct: 859 KLLDEM 864



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 188/362 (51%), Gaps = 7/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +L+  G  P+VFTY++LI+G C+ G    A  L +EM       G+   PN  
Sbjct: 542 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK----GIA--PNIF 595

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  ++DGLCK G + +A++LF  M ++ + P+ VTY+++I G+C + +  EA  LF EM
Sbjct: 596 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GVQP+   +N +++  CK G M++A  L   M+Q G       +NTL+DG+C + ++
Sbjct: 656 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 714

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M +     +  +Y+ +I+ +CK  ++E A  L+ EM  + +  D V Y +L
Sbjct: 715 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 774

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ Q    F LF++M   GV  D   Y   I   CK   +VEA +L   +     
Sbjct: 775 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 834

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 ++ LI  LCK   L  A +L   +    L   +   + ++ +    GKMD+A  
Sbjct: 835 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 894

Query: 362 LF 363
           +F
Sbjct: 895 VF 896



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 179/349 (51%), Gaps = 7/349 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+F YN L++GLC++G    A  LF+ M     E      P++VTY+T+IDG CK 
Sbjct: 589 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE------PDSVTYSTMIDGYCKS 642

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V +A  LF +M  + + P+   YN+L+HG C   D  +A  LF EM+ +G     +SF
Sbjct: 643 ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSF 701

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK+ K+ EAS+L + MI   + P+   Y T++D  C  G++  A  LF  M+ 
Sbjct: 702 NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 761

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +  +Y+ L+ GY K  +     +L+ +M++KG+KPD V Y  +     +   +  
Sbjct: 762 RNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE 821

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AFKL DE+   G+      +   I  LCK   + EA +L   +  L  +  + A + L+ 
Sbjct: 822 AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVR 881

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
              ++G++  A  +F  +    L+ D  T   +++    D   + AR+L
Sbjct: 882 SFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 930



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 122/405 (30%), Positives = 193/405 (47%), Gaps = 53/405 (13%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN--------------GEFGVVCKPN 59
           G  P VF  + LI+   R G    A N+F    N +              GE G+V  PN
Sbjct: 153 GSSPVVF--DILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLV--PN 208

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           T TYT I  GLC+   +++AK  F +M+   + P+    ++LI GF    D +E   +  
Sbjct: 209 TYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKD 268

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+  G+  N++++NV+++ LCK GKM++A+ +L+ MI +G +PN+  +  L++G+C   
Sbjct: 269 VMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREH 328

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            + RA EL   ME      +  SY  +ING C  K++  A  L  +M   G+KP+VV+Y+
Sbjct: 329 NMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 388

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR------------------------- 274
           TL +G     ++E A +L D M   GVA D + Y                          
Sbjct: 389 TLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 448

Query: 275 ----------TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
                      FI G  K G + EA + F  +       +   Y  LI+G  K+G L  A
Sbjct: 449 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 508

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +FR L    ++ DV T +  IH L  +G++ +A  +F +++ K
Sbjct: 509 LSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 137/278 (49%), Gaps = 7/278 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF ++   G +P+ F YN L++G C+ G    A+NLF EM      F       T+
Sbjct: 647 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKG--FAT-----TL 699

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ T+IDG CK   + +A +LF +M  + I P+ VTY ++I   C A    EA  LF EM
Sbjct: 700 SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 759

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ +  + V++  +M    K G+  E   L E M+  GV+P+   Y  ++   C    +
Sbjct: 760 QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 819

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   +   G       + +LI   CK +++  A  L  EM   G+KP +   +TL
Sbjct: 820 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTL 879

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
                E  +++ A ++F+ ++  G+  DT      ++G
Sbjct: 880 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 917



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 119/226 (52%), Gaps = 6/226 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ LF ++      P+  TY T+I+  C+ G    A  LF+EM   N         +TV
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN------LIVDTV 769

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT+++ G  K G   +   LF KM  + + P+ VTY  +I+  C  ++  EA  L  E+
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 829

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+       ++++  LCK   + EAS+LL+ M ++G++P+    +TL+  F   G++
Sbjct: 830 VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKM 889

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           + A  +F  ++S+G   +  +   L+NG   + + E A +L  +++
Sbjct: 890 DEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 185/351 (52%), Gaps = 8/351 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P+V TY  L+   C+      A+ L +EM A G       C P+ +TY  +++G+C+
Sbjct: 186 GCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKG-------CAPDIITYNVVVNGICQ 238

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG VD A E    +      PN V+YN ++ G C A  W +A+ L  EM  +G  PNVV+
Sbjct: 239 EGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVT 298

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN++++ LC+ G ++ A  +L+ + + G  PN+  YN ++  FC   +++RA      M 
Sbjct: 299 FNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMV 358

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S GC  ++ SY+ L+   C+  E++ A+ L  ++  KG  P ++ YNT+  GL +  + +
Sbjct: 359 SRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTK 418

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L +EM   G+  D   Y T   GLC+   I EA+  F  ++ +    +   YN ++
Sbjct: 419 EALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAIL 478

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            GLCK      A +LF  +     + +  TY I+I  L  +G + +AR+L 
Sbjct: 479 LGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELL 529



 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/351 (31%), Positives = 183/351 (52%), Gaps = 6/351 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP+ +TYNTLI GLC  G T  AL + ++M          C P+ VTYT +++  CK   
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRG------CVPDVVTYTILLEATCKRSG 206

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             +A +L  +M+ +   P+++TYN +++G C     ++A      +   G +PN VS+N+
Sbjct: 207 YKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNI 266

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC   + ++A +L+  M Q G  PN   +N L+   C  G V  A E+   +   G
Sbjct: 267 VLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYG 326

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  N  SY+ +++ +CK K+++ A++    M+S+G  PD+V YNTL   L    +V+ A 
Sbjct: 327 CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAV 386

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +++  G      +Y T IDGL K G   EA+EL   +     + DI  Y+ +  GL
Sbjct: 387 ELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGL 446

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C+  R++ A   F  +    +  + V YN ++  LC   +   A DLF+ M
Sbjct: 447 CREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYM 497



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 177/354 (50%), Gaps = 9/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            CEP+V  YN ++ G C TG    A  L  +M           +P++ TY T+I GLC  
Sbjct: 119 ACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP---------MEPDSYTYNTLIRGLCGR 169

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A  +   M      P+VVTY  L+   C  + + +A  L  EM  +G  P+++++
Sbjct: 170 GRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITY 229

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           NV++N +C+ G++D+A   L+ +   G  PN   YN ++ G C   R   AE+L   M  
Sbjct: 230 NVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQ 289

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV ++++LI+  C+   +E A+ +  ++   G  P+ + YN +     +  +++R
Sbjct: 290 KGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDR 349

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A    + M   G   D  +Y T +  LC+ G +  AVEL   L+       + +YN +ID
Sbjct: 350 AMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVID 409

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GL K+G+ K A EL   +    L  D++TY+ +   LC + ++++A   F  ++
Sbjct: 410 GLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQ 463



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 173/367 (47%), Gaps = 16/367 (4%)

Query: 5   ALFMKLRVFGCEPNVFTYN--TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AL +   + G EP+        LI  LC +G T  A  +              C+P+ + 
Sbjct: 78  ALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----------AACEPDVMA 126

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++ G C  G +D A+ L   M  E   P+  TYN+LI G C       A  +  +M+
Sbjct: 127 YNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALVVLDDML 183

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+VV++ +++   CK     +A +LL+ M   G  P+   YN +++G C  GRV+
Sbjct: 184 RRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVD 243

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A E   S+ S GC+ N  SY+I++ G C  +  E A  L +EM  KG  P+VV +N L 
Sbjct: 244 DAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLI 303

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L     VE A ++ D++ ++G   ++ +Y   +   CK   +  A+     +      
Sbjct: 304 SFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCY 363

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            DI +YN L+  LC+ G +  A EL   L        +++YN +I  L   GK  +A +L
Sbjct: 364 PDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALEL 423

Query: 363 FLDMEAK 369
             +M  K
Sbjct: 424 LNEMVTK 430



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 145/295 (49%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A      L   GCEPN  +YN ++ GLC       A  L  EM+           PN V
Sbjct: 244 DAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKG------YPPNVV 297

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I  LC+ G V+ A E+  ++      PN ++YN ++H FC     + A      M
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELM 357

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P++VS+N ++  LC+ G++D A  LL  +   G  P    YNT++DG    G+ 
Sbjct: 358 VSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKT 417

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M + G + ++ +YS + +G C+   IE A+  + ++   GI+P+ V+YN +
Sbjct: 418 KEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAI 477

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +GL +  +   A  LF  M  +G   +   Y   I+GL   G + EA EL   L
Sbjct: 478 LLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGEL 532



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 138/267 (51%), Gaps = 6/267 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV T+N LI+ LCR G    A+ + +++     ++G  C PN++
Sbjct: 279 DAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIP----KYG--CTPNSL 332

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  I+   CK+  +D+A      M      P++V+YN+L+   C   + + A  L  ++
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P ++S+N +++ L K GK  EA  LL  M+  G++P+   Y+T+  G C   R+
Sbjct: 393 KDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRI 452

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A   F  ++ MG + N   Y+ ++ G CK +E   A+ L+  M+S G  P+   Y  L
Sbjct: 453 EEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTIL 512

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA 268
             GL     V+ A +L  E+   GV +
Sbjct: 513 IEGLTYEGLVKEARELLGELCSRGVVS 539


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 193/366 (52%), Gaps = 11/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA +L   +   GC+P+V TY  L+  +C++     A+ + +EM A G       C PN 
Sbjct: 194 EALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKG-------CTPNI 246

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  II+G+C+EG VD A+E   ++      P+ V+Y +++ G C A  W + + LF E
Sbjct: 247 VTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAE 306

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM++   PN V+F++++   C+ G ++ A ++LE M   G   N  + N +++  C  GR
Sbjct: 307 MMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGR 366

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A +   +M S GC  +  SY+ ++ G C+ +  E A  L  EM+ K   P+ V +NT
Sbjct: 367 VDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNT 426

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               L +   +E+A  L ++M  HG   +   Y   ++G C  G +  A+ELF +   + 
Sbjct: 427 FICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYS---MP 483

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +   Y  L+ GLC + RL  A EL   + +     +VVT+N+++   C  G MD+A 
Sbjct: 484 CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAI 543

Query: 361 DLFLDM 366
           +L   M
Sbjct: 544 ELVEQM 549



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 176/353 (49%), Gaps = 9/353 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ +TY  +I GLC  G    AL+L ++M +        C+P+ VTYT +++ +CK    
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG------CQPSVVTYTVLLEAVCKSTGF 227

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A E+  +M+ +   PN+VTYN +I+G C     ++A+     +   G QP+ VS+  +
Sbjct: 228 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 287

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC   + ++   L   M++    PN   ++ L+  FC  G V RA ++   M   GC
Sbjct: 288 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 347

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N    +I+IN  CK   ++ A    + M S G  PD + Y T+  GL    + E A +
Sbjct: 348 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 407

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  EM R     +   + TFI  LC+ G I +A  L   +     E++I  YN L++G C
Sbjct: 408 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 467

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             GR+  A ELF S+P      + +TY  ++  LC   ++D A +L  +M  K
Sbjct: 468 VQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 517



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 187/397 (47%), Gaps = 44/397 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++R  GC PN+ TYN +ING+CR G    A     E  N    +G   +P+TV
Sbjct: 229 QAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA----REFLNRLSSYGF--QPDTV 282

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YTT++ GLC     +  +ELF +M ++N  PN VT++ L+  FC       A  +  +M
Sbjct: 283 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 342

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   N    N+++N +CK G++D+A + L  M   G  P+   Y T++ G C   R 
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 402

Query: 182 NRAEELFVSM--------------------------------ESM---GCKHNVFSYSIL 206
             A+EL   M                                E M   GC+ N+ +Y+ L
Sbjct: 403 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 462

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG+C    ++ AL L+  M     KP+ + Y TL  GL    +++ A +L  EM +   
Sbjct: 463 VNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC 519

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A +   +   +   C+ G + EA+EL   +       ++  YN L+DG+ K    + A E
Sbjct: 520 APNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALE 579

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L   L    +  D+VTY+ +I  L  + ++++A  +F
Sbjct: 580 LLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMF 616



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 181/364 (49%), Gaps = 9/364 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++   GC  N    N +IN +C+ G    A      M    G +G  C P+T++
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM----GSYG--CSPDTIS 388

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++ GLC+    + AKEL  +M  +N  PN VT+N+ I   C      +A  L  +M 
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G + N+V++N ++N  C  G++D A   LEL   +  +PN   Y TL+ G C   R++
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLD 505

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M    C  NV ++++L++ +C+   ++ A+ L  +M+  G  P+++ YNTL 
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+ +    E A +L   +  +GV+ D   Y + I  L +   + EA+++F  ++ L   
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 625

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                YN ++  LCK      A + F  +     + + +TY  +I  L  +  + + RDL
Sbjct: 626 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 685

Query: 363 FLDM 366
             ++
Sbjct: 686 LREL 689



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 172/364 (47%), Gaps = 9/364 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L  +    G  P+V+    LI  LCR G T  A  +            V        
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVF------A 146

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++ G C+ G +D A+ L   M    + P+  TY  +I G C      EA  L  +M+
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDML 203

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G QP+VV++ V++  +CK+    +A  +L+ M   G  PN   YN +++G C  GRV+
Sbjct: 204 HRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 263

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A E    + S G + +  SY+ ++ G C  K  E    L++EM+ K   P+ V ++ L 
Sbjct: 264 DAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLV 323

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                   VERA ++ ++M  HG AA+T      I+ +CK G + +A +    +      
Sbjct: 324 RFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D  +Y  ++ GLC++ R + A EL + + R     + VT+N  I  LC  G +++A  L
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATML 443

Query: 363 FLDM 366
              M
Sbjct: 444 IEQM 447



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 9/295 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++    C PN  T+NT I  LC+ G    A  L E+M+    E G  C+ N V
Sbjct: 404 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIV 457

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++G C +G VD A ELF  M      PN +TY +L+ G C A   + A  L  EM
Sbjct: 458 TYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEM 514

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PNVV+FNV+++  C+ G MDEA  L+E M++ G  PN   YNTL+DG       
Sbjct: 515 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 574

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   + S G   ++ +YS +I    +   +E A+ ++  +   G++P  VIYN +
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 634

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + L +    + A   F  M  +G   +   Y T I+GL    ++ E  +L R L
Sbjct: 635 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 689



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 140/265 (52%), Gaps = 9/265 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GCE N+ TYN L+NG C  G    AL LF         + + CKPNT+
Sbjct: 439 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---------YSMPCKPNTI 489

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ GLC    +D A EL  +M  ++  PNVVT+N L+  FC     +EA  L  +M
Sbjct: 490 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 549

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN++++N +++ + K+   +EA  LL  ++  GV P+   Y++++       RV
Sbjct: 550 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 609

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  ++ +G +     Y+ ++   CK    +GA+  ++ M+S G  P+ + Y TL
Sbjct: 610 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 669

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
             GL     ++    L  E+   GV
Sbjct: 670 IEGLANEDFLKETRDLLRELCSRGV 694



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 105/221 (47%), Gaps = 3/221 (1%)

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A+RL++     G  P+ ++   L+   C  GR + A  +  + E  G   +VF+Y+ L+ 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           GYC+  +++ A  L + M    + PD   Y  +  GL +  +V  A  L D+M   G   
Sbjct: 153 GYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
               Y   ++ +CK+    +A+E+   +R      +I  YN +I+G+C+ GR+  A E  
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L       D V+Y  ++  LCA  + +   +LF +M  K
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 310



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 3/181 (1%)

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           RA  L     S G   +V+  + LI   C+      A  +       G   DV  YNTL 
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     Q++ A +L   M    VA D + Y   I GLC  G + EA+ L   +     +
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  Y  L++ +CKS     A E+   +       ++VTYN++I+ +C +G++D AR+ 
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 363 F 363
            
Sbjct: 269 L 269



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 53/114 (46%), Gaps = 3/114 (2%)

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           RA +L D     G A D +     I  LC+ G   +A  + R        +D+ AYN L+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G C+ G+L  A  L  S+P   +  D  TY  +I  LC  G++ +A  L  DM
Sbjct: 152 AGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 202


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/356 (35%), Positives = 191/356 (53%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P V TYNT+++  C+ G    AL L  +M        + C PN VTY  +++GL   
Sbjct: 185 GIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQK------MGCLPNDVTYNVLVNGLSHS 238

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++AKEL  +M    +  +  TY+ LI G+C     +EA  L  EM+ +G  P +V++
Sbjct: 239 GELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTY 298

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N IM  LCK G++ +A +LL++M+   + P+   YNTL+ G+   G +  A  LF  +  
Sbjct: 299 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRF 358

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V +Y+ LI+G C+  +++ A+ L  EM+  G  PDV  +  L  G  ++  +  
Sbjct: 359 RGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPM 418

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LFDEM   G+  D +AY T I G  K G   +A  +   +    +  D+  YN  ID
Sbjct: 419 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 478

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL K G LK A EL + +    L+ D VTY  +IHA    G + KAR +FL+M +K
Sbjct: 479 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSK 534



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 202/397 (50%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM---------------- 45
           EA  L ++++  GC PN  TYN L+NGL  +G    A  L +EM                
Sbjct: 208 EALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLI 267

Query: 46  -----------ANGNGE--FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                      A+  GE        P  VTY TI+ GLCK G V  A++L   M ++N+ 
Sbjct: 268 RGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLM 327

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++V+YN+LI+G+    +  EA  LF E+  +G+ P+VV++N +++ LC+ G +D A RL
Sbjct: 328 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRL 387

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI+ G  P+ F +  L+ GFC  G +  A+ELF  M + G + + F+Y   I G  K
Sbjct: 388 KDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK 447

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +   A  +  EML++G  PD++ YN    GL ++  ++ A +L  +M  +G+  D   
Sbjct: 448 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 507

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + I      G++ +A  +F  +        +  Y  LI      GRLK+A   F  + 
Sbjct: 508 YTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 567

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +  +V+TYN +I+ LC   KMD+A   F +M+AK
Sbjct: 568 EKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAK 604



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/326 (31%), Positives = 181/326 (55%), Gaps = 6/326 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +LR  G  P+V TYNTLI+GLCR G   VA+ L +EM     +      P+  
Sbjct: 348 EAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPD------PDVF 401

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T ++ G CK G +  AKELF +M +  + P+   Y + I G     D ++A  +  EM
Sbjct: 402 TFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 461

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+++++NV ++ L K G + EAS L++ M+  G+ P+   Y +++    + G +
Sbjct: 462 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL 521

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +F+ M S G   +V +Y++LI+ Y     ++ A+  + EM  KG+ P+V+ YN L
Sbjct: 522 RKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 581

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ ++++A+K F EMQ  G++ + + Y   I+  C  G+  EA+ L++ +   + 
Sbjct: 582 INGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREI 641

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWEL 327
           + D   ++ L+  L K  +  +   L
Sbjct: 642 QPDSCTHSALLKHLNKDYKSHVVRHL 667



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 156/298 (52%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           ++  +D A+E++  M +  I P VVTYN+++  FC      EA  L ++M   G  PN V
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++NV++N L  +G++++A  L++ M+++G+  +A+ Y+ L+ G+C  G+++ A  L   M
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEM 286

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            S G    + +Y+ ++ G CK   +  A  L   M++K + PD+V YNTL  G   +  +
Sbjct: 287 LSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 346

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             AF LF E++  G+      Y T IDGLC+ G +  A+ L   +     + D+  +  L
Sbjct: 347 GEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTIL 406

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + G CK G L +A ELF  +    L  D   Y   I      G   KA  +  +M A+
Sbjct: 407 VRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 464



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 174/369 (47%), Gaps = 44/369 (11%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF--------------------- 75
           VAL  F       G      K + +TY  I+D L + G                      
Sbjct: 63  VALRFFRWAERQTG-----FKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVV 117

Query: 76  -----------------VDKAKELFLKMKDENINPNVVTYNSLIHGFC-YANDWNEAKCL 117
                            ++K   +F KM  + + P++   N ++       +  + A+ +
Sbjct: 118 DVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREV 177

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +  M++ G++P VV++N +++  CK GK+ EA +LL  M ++G  PN   YN L++G   
Sbjct: 178 YNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSH 237

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           +G + +A+EL   M  +G + + ++Y  LI GYC+  +++ A  L  EMLS+G  P +V 
Sbjct: 238 SGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVT 297

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNT+  GL +  +V  A KL D M    +  D  +Y T I G  + G I EA  LF  LR
Sbjct: 298 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  +  YN LIDGLC+ G L +A  L   + +     DV T+ I++   C  G + 
Sbjct: 358 FRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLP 417

Query: 358 KARDLFLDM 366
            A++LF +M
Sbjct: 418 MAKELFDEM 426


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 118/365 (32%), Positives = 199/365 (54%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +   K+   G EP++ T+ +L+NG C       A++L +++       G+  +PN V 
Sbjct: 127 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV------GLGYEPNVVI 180

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIID LC+   VD A ++   M+   I P+V+TYNSLI    ++  W  +  +  +MM
Sbjct: 181 YNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGVSARILSDMM 240

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+V++F+ +++   K G++ EA +  + MIQ  V PN   YN+L++G C+ G ++
Sbjct: 241 RMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLD 300

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+++   M S G   N  +Y+ L+NGYCK+K ++ A+ +   M   G+  D   YNTL+
Sbjct: 301 EAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLY 360

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  Q   A K+   M   GV  D + +   +DGLC++G I +A+     L+  +  
Sbjct: 361 QGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETV 420

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           + I  YN +I G+CK+ +++ AW LF SL    +  DV+TY  M+  L       +A +L
Sbjct: 421 VGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHEL 480

Query: 363 FLDME 367
           +  M+
Sbjct: 481 YRKMK 485



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF  + + G   ++++++TLI+  CR     +AL+   +M     E      P+ VT+ 
Sbjct: 94  SLFRHIEILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFE------PSIVTFG 147

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++++G C    + +A  L  ++      PNVV YN++I   C     + A  +   M   
Sbjct: 148 SLVNGFCHVNRIQEAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKM 207

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++P+V+++N ++  L  +GK   ++R+L  M+++G+ P+   ++ ++D F   G++  A
Sbjct: 208 GIRPDVITYNSLITRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEA 267

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           ++ +  M       N+ +Y+ LING C +  ++ A  + + M+SKG  P+ V YNTL  G
Sbjct: 268 KKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNG 327

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  +V+ A K+   M   GV  DT+ Y T   G C+ G    A ++   +       D
Sbjct: 328 YCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPD 387

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  +N L+DGLC+ G+++ A      L +   +  ++TYNI+I  +C   K++ A  LF 
Sbjct: 388 IYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFC 447

Query: 365 DMEAK 369
            +  K
Sbjct: 448 SLALK 452



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 164/329 (49%), Gaps = 6/329 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL LF +MA           P+ V ++ ++  + K    +    LF  ++   I+ ++ +
Sbjct: 57  ALTLFCDMAESRP------LPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYS 110

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +++LI  FC  +  + A     +MM  G +P++V+F  ++N  C   ++ EA  L++ ++
Sbjct: 111 FSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIV 170

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G  PN  +YNT++D  C   +V+ A ++   ME MG + +V +Y+ LI     + +  
Sbjct: 171 GLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWG 230

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            +  + S+M+  GI PDV+ ++ +     +  Q+  A K +DEM +  V  +   Y + I
Sbjct: 231 VSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLI 290

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLC +G + EA ++   +    +  +   YN L++G CKS R+  A ++   +    + 
Sbjct: 291 NGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVD 350

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
            D  TYN +    C  G+ + A  +   M
Sbjct: 351 GDTFTYNTLYQGYCQAGQFNAAEKVLARM 379



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 120/226 (53%), Gaps = 6/226 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   + ++     +PN+ TYN+LINGLC  G    A  +   M +  G F     PN 
Sbjct: 265 LEAKKQYDEMIQRSVDPNIVTYNSLINGLCIHGLLDEAKKVLNFMVS-KGFF-----PNA 318

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+++G CK   VD A ++   M  + ++ +  TYN+L  G+C A  +N A+ +   
Sbjct: 319 VTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLAR 378

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV P++ +FN++++ LC++GK+++A   LE + +         YN ++ G C   +
Sbjct: 379 MVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANK 438

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           V  A  LF S+   G   +V +Y+ ++ G  + +    A  LY +M
Sbjct: 439 VEDAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKM 484



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 140/272 (51%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y   +    ++  +N+A  LF +M +    P++V F+ ++  + K  K +    L   + 
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G+  + + ++TL+D FC   R++ A      M  +G + ++ ++  L+NG+C    I+
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+SL  +++  G +P+VVIYNT+   L E  QV+ A  + + M++ G+  D   Y + I
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             L  +G    +  +   +  +    D+  ++ +ID   K G+L  A + +  + +  + 
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ++VTYN +I+ LC  G +D+A+ +   M +K
Sbjct: 281 PNIVTYNSLINGLCIHGLLDEAKKVLNFMVSK 312



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 30/110 (27%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK------- 57
           G  P+++T+N L++GLC  G    AL   E++       G++         CK       
Sbjct: 383 GVLPDIYTFNMLLDGLCEHGKIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDA 442

Query: 58  -------------PNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINP 93
                        P+ +TYTT++ GL ++    +A EL+ KM KD+ + P
Sbjct: 443 WYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKKDDGLMP 492


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/393 (31%), Positives = 200/393 (50%), Gaps = 47/393 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+ LF +++  G  P+  TYN++I+G  + G     +  FEEM +      + C+P+ +T
Sbjct: 152 ASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS------MSCEPDVIT 205

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+  CK G + K  E F +MK   + PNVV+Y++L+  FC  +   +A   +++M 
Sbjct: 206 YNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMR 265

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  ++  +++  CK G + +A RL + M Q+GV  N   Y  L+DG C   R+ 
Sbjct: 266 RLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIK 325

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEELF  M + G   N+ SY+ LI+G+ K K ++ AL L  EM  +GIKPD+++Y T  
Sbjct: 326 EAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFI 385

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT--------------------------- 275
             L  + ++E A  + +EMQ  G+ A+T+ Y T                           
Sbjct: 386 WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIE 445

Query: 276 --------FIDGLCKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                    IDGLCKN  + +A++ F R       + +   Y  +IDGLCK  +++ A  
Sbjct: 446 VTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATT 505

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           LF  + +  L+ D   Y  +I     DGK+ + 
Sbjct: 506 LFEQMAQKGLVPDRTAYTSLI-----DGKLKQG 533



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/315 (30%), Positives = 167/315 (53%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VC P    +  +   L +E   ++A + F KMK   + P   + N L+H F      +  
Sbjct: 58  VCVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGM 117

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           K  F +M+  G +P V ++N++++ +CK G ++ AS L E M   G+ P+   YN+++DG
Sbjct: 118 KRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDG 177

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +   GR++     F  M+SM C+ +V +Y+ LIN +CK  ++   L  + EM   G+KP+
Sbjct: 178 YGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPN 237

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+TL     +   +++A K + +M+R G+  +   Y + +D  CK G + +A  L  
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++  Y  LIDGLC   R+K A ELF  +    +I ++ +Y  +IH      
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357

Query: 355 KMDKARDLFLDMEAK 369
            MD+A +L  +M+ +
Sbjct: 358 NMDRALELLDEMKGR 372



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 169/348 (48%), Gaps = 6/348 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F K++     P   + N L++   R G T      F++M       G   KP   
Sbjct: 81  EALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDM------IGAGSKPTVF 134

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID +CKEG ++ A  LF +MK   + P+ VTYNS+I G+      ++    F EM
Sbjct: 135 TYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                +P+V+++N ++N  CK GK+ +       M Q G++PN   Y+TL+D FC    +
Sbjct: 195 KSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMM 254

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A + +V M  +G   N  +Y+ L++ YCK   +  A  L  EM   G++ +VV Y  L
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTAL 314

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ +++ A +LF +M   GV  +  +Y   I G  K   +  A+EL   ++    
Sbjct: 315 IDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGI 374

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           + D+  Y   I  LC   +++ A  +   +    + A+   Y  ++ A
Sbjct: 375 KPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDA 422



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 158/293 (53%), Gaps = 7/293 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +A   ++ +R  G  PN  TY +L++  C+ G+   A  L +EM+    E+      N 
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEW------NV 308

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +IDGLC    + +A+ELF KM    + PN+ +Y +LIHGF  A + + A  L  E
Sbjct: 309 VTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDE 368

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++P+++ +   +  LC   K++ A  ++  M + G++ N F+Y TLMD +  +  
Sbjct: 369 MKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSEN 428

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYN 239
            +    L   M  +  +    ++ +LI+G CKNK +  A+  +  + +  G++ +  IY 
Sbjct: 429 PSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYT 488

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            +  GL +  QVE A  LF++M + G+  D  AY + IDG  K G +V+A+ L
Sbjct: 489 AMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALAL 541



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T+  LI+GLC+      A++ F  ++N   +FG+  + N   YT +IDGLCKE  V+ A 
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRISN---DFGL--QANAAIYTAMIDGLCKEDQVEAAT 504

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            LF +M  + + P+   Y SLI G     +  +A  L  +M + GV+           +L
Sbjct: 505 TLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVESGAR-----FGDL 559

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYN 169
           C+N         ++L +++G R     YN
Sbjct: 560 CQN--------TIKLSLRMGARVGVQHYN 580


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/356 (35%), Positives = 189/356 (53%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P V TYNT+++  C+ G    AL L  +M        + C PN VTY  +++GL   
Sbjct: 197 GICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQ------AMGCSPNDVTYNVLVNGLSHS 250

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++AKEL   M    +  +V TY+ LI G+C      EA  L  EM+ +G  P VV++
Sbjct: 251 GEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTY 310

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N IM  LCK G++ +A +LL++M+   + P+   YNTL+ G+   G +  A  LF  +  
Sbjct: 311 NTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRY 370

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +V +Y+ LI+G C+  +++ A+ L  EM+  G  PDV  + T   G  ++  +  
Sbjct: 371 RSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPM 430

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LFDEM   G+  D +AY T I G  K G   +A  +   +    +  D+  YN  ID
Sbjct: 431 AKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFID 490

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL K G LK A EL + +    L+ D VTY  +IHA    G + KAR LFL+M +K
Sbjct: 491 GLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSK 546



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 201/397 (50%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  L  +++  GC PN  TYN L+NGL  +G    A  L ++M     E  V       
Sbjct: 220 EALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLI 279

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              C+                    P  VTY TI+ GLCK G V  A++L   M ++N+ 
Sbjct: 280 RGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLM 339

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++V+YN+LI+G+    +  EA  LF E+  + + P+VV++N +++ LC+ G +D A RL
Sbjct: 340 PDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRL 399

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI+ G  P+ F + T + GFC  G +  A+ELF  M + G + + F+Y   I G  K
Sbjct: 400 KDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELK 459

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +   A  +  EML++G  PD++ YN    GL ++  ++ A +L  +M  +G+  D   
Sbjct: 460 LGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVT 519

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + I      G++ +A  LF  +        +  Y  LI      GRLK+A   F  + 
Sbjct: 520 YTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMH 579

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +  +V+TYN +I+ LC   KMD+A + F +M+AK
Sbjct: 580 EKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAK 616



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 104/326 (31%), Positives = 179/326 (54%), Gaps = 6/326 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +LR     P+V TYNTLI+GLCR G   VA+ L +EM     +      P+  
Sbjct: 360 EAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPD------PDVF 413

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+TT + G CK G +  AKELF +M +  + P+   Y + I G     D ++A  +  EM
Sbjct: 414 TFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEM 473

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+++++NV ++ L K G + EAS L++ M+  G+ P+   Y +++    + G +
Sbjct: 474 LARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHL 533

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF+ M S G   +V +Y++LI+ Y     ++ A+  + EM  KG+ P+V+ YN L
Sbjct: 534 RKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNAL 593

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ ++++A+  F EMQ  G++ + + Y   I+  C  G+  EA+ L++ +   + 
Sbjct: 594 INGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREI 653

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWEL 327
           + D   +  L+  L K  +L +   L
Sbjct: 654 QPDSCTHRSLLKHLNKDYKLHVVRHL 679



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 178/345 (51%), Gaps = 5/345 (1%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL----CKEGFVDKAKEL 82
           NGL R+ + ++   +  +M NG  +     + +  +   I+D L     K+  ++K   +
Sbjct: 94  NGLMRSAYCVMEKVVSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLV 153

Query: 83  FLKMKDENINPNVVTYNSLIHGFC-YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           F KM  + + P+V   N ++       N+ + A+ ++  M++ G+ P VV++N +++  C
Sbjct: 154 FYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFC 213

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G + EA +LL  M  +G  PN   YN L++G   +G + +A+EL   M  +G + +V+
Sbjct: 214 KKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVY 273

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y  LI GYC+  +IE A  L  EMLS+G  P VV YNT+  GL +  +V  A KL D M
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVM 333

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
               +  D  +Y T I G  + G I EA  LF  LR       +  YN LIDGLC+ G L
Sbjct: 334 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDL 393

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +A  L   + +     DV T+   +   C  G +  A++LF +M
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEM 438


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 194/360 (53%), Gaps = 6/360 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F +L    CEP V TY  LI      G   VA+ L +EM +   E      P+T+T
Sbjct: 192 ALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLE------PDTLT 245

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  II G+CKE  VDKA EL   +      P+++TYN L+        W+E + L  EM+
Sbjct: 246 YNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI 305

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PNVV+ ++++  LC++GK++EA  LL  M + G++P+A+ Y+ L+ GFC  GR++
Sbjct: 306 SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLD 365

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A E    M S GC  ++ +Y+ ++ G C+  + + AL ++ ++   G  P+V  YNTLF
Sbjct: 366 LATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLF 425

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L+      RA ++  ++   G+  D   Y + I  LC++G + EA+EL   ++  +Y 
Sbjct: 426 SALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYR 485

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++ +YN ++ GLCK  R   A E+  ++       +  TY ++I  +   G   +A +L
Sbjct: 486 PNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 183/353 (51%), Gaps = 6/353 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+VF YN LI+G  +      A  + + M +     G +  P+ VTY  +I   C  G 
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSR----GFL--PDVVTYNIMIGSFCSRGK 188

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A E+F ++  +N  P V+TY  LI         + A  L  EM+ +G++P+ +++N 
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNA 248

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I+  +CK   +D+A  LL  +   G +P+   YN L+      G+ +  E+L   M S+G
Sbjct: 249 IIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIG 308

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           CK NV ++SILI   C++ ++E A++L   M  KG+KPD   Y+ L  G     +++ A 
Sbjct: 309 CKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLAT 368

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +  + M   G   D   Y T + GLC+ G   +A+E+F  L  +    ++ +YN L   L
Sbjct: 369 EFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSAL 428

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             SG    A E+   L    +  D +TYN +I  LC DG +D+A +L +DM++
Sbjct: 429 WSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQS 481



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 152/295 (51%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   L   GC+P++ TYN L+  L   G       L  EM        + CKPN V
Sbjct: 261 KAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM------ISIGCKPNVV 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +I  LC++G V++A  L   MK++ + P+   Y+ LI GFC     + A      M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P++V++N IM  LC+ GK D+A  + E + ++G  PN   YNTL      +G  
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA E+ + + + G   +  +Y+ LI+  C++  ++ A+ L  +M S   +P+VV YN +
Sbjct: 435 YRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNII 494

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +GL ++++   A ++   M   G   +   Y   I+G+  +G   EA+EL  +L
Sbjct: 495 LLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  147 bits (370), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 160/328 (48%), Gaps = 36/328 (10%)

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+ G  +++      M D+   P+V+    LI GF  + +  +A    +E++++  +P+V
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKAT-RVMEILERYGKPDV 138

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            ++N +++   K  +++ A+R+L+ M   G  P+   YN ++  FC  G+++ A E+F  
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           +    C+  V +Y+ILI     +  I+ A+ L  EMLSKG++PD + YN +  G+ +   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 251 VERAFKLFDEMQRHGVAADTWAY----RT------------------------------- 275
           V++AF+L   +   G   D   Y    RT                               
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSI 318

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I  LC++G + EAV L R+++    + D   Y+ LI G C+ GRL +A E    +    
Sbjct: 319 LIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDG 378

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLF 363
            + D+V YN ++  LC  GK D+A ++F
Sbjct: 379 CLPDIVNYNTIMAGLCRTGKADQALEVF 406



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 66/181 (36%), Positives = 100/181 (55%), Gaps = 6/181 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++  YNT++ GLCRTG    AL +FE++        V C PN  +Y T+   L   
Sbjct: 378 GCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE------VGCPPNVSSYNTLFSALWSS 431

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A E+ LK+ ++ I+P+ +TYNSLI   C     +EA  L ++M     +PNVVS+
Sbjct: 432 GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY 491

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+I+  LCK  + ++A  +L  M + G +PN   Y  L++G   +G    A EL  S+  
Sbjct: 492 NIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHG 551

Query: 194 M 194
           M
Sbjct: 552 M 552



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 43/250 (17%)

Query: 127 QPNVVSFNV-------IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           Q +V+SF+        ++N  C+ GK +E+   LE M+  G  P+  +   L+ GF  + 
Sbjct: 59  QTHVLSFDFKEVHLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSR 118

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            + +A  +   +E  G                                    KPDV  YN
Sbjct: 119 NIGKATRVMEILERYG------------------------------------KPDVFAYN 142

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G  + +Q+E A ++ D M+  G   D   Y   I   C  G +  A+E+F  L   
Sbjct: 143 ALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKD 202

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             E  +  Y  LI+     G + +A +L   +    L  D +TYN +I  +C +  +DKA
Sbjct: 203 NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKA 262

Query: 360 RDLFLDMEAK 369
            +L   + ++
Sbjct: 263 FELLRSLSSR 272


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/359 (34%), Positives = 183/359 (50%), Gaps = 7/359 (1%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M+ R   C PN  TYN +I GL R G+   A  L EEM           K ++ TY  +I
Sbjct: 257 MEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-------KASSFTYNPLI 309

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GL   GFV K  +L L+M++E I P VVTYN++IHG   +     A+  F+EM   G+ 
Sbjct: 310 TGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLL 369

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+V+++N ++N  CK G   EA  L   + + G+ P    YN L+DG+C  G +  A  L
Sbjct: 370 PDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRL 429

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M   GC  +V++Y+IL+ G      +      + EMLSKG++PD   YNT       
Sbjct: 430 KEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEIT 489

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           +  + ++F+L + +   G+++DT  Y   IDGLCK G + +A EL   +     + D   
Sbjct: 490 LGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCIT 549

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y CLI   C+ G L+ A + F  +    L    VTY ++IHA C  G +  A   F  M
Sbjct: 550 YTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKM 608



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/363 (33%), Positives = 188/363 (51%), Gaps = 5/363 (1%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           +A+  ++   G EP++ TYNTL++   + G       L +EM       G  C PN VTY
Sbjct: 216 SAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEME----ARGSSCLPNDVTY 271

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
             +I GL ++G++++A EL  +M+      +  TYN LI G        +   L +EM +
Sbjct: 272 NVVIAGLARKGYLEEAAELVEEMRLSK-KASSFTYNPLITGLLARGFVKKVDDLQLEMEN 330

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G+ P VV++N +++ L ++G+++ A      M  +G+ P+   YN+L++G+C  G    
Sbjct: 331 EGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKE 390

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  LF  +   G    V +Y+ILI+GYC+  ++E A  L  EM+ +G  PDV  Y  L  
Sbjct: 391 ALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMK 450

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G   +  +    + FDEM   G+  D +AY T I      G I ++ +L   + +     
Sbjct: 451 GSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISS 510

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D   YN LIDGLCK+G LK A EL   +    L  D +TY  +IHA C  G + +AR  F
Sbjct: 511 DTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFF 570

Query: 364 LDM 366
            DM
Sbjct: 571 NDM 573



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 170/343 (49%), Gaps = 11/343 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P V TYN +I+GL ++G    A   F EM       G++  P+ +TY ++++G CK 
Sbjct: 332 GIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMR----AMGLL--PDVITYNSLLNGYCKA 385

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  LF  ++   + P V+TYN LI G+C   D  EA+ L  EM++QG  P+V ++
Sbjct: 386 GNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTY 445

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++M        +       + M+  G+RP+ F YNT +      G ++++ +L   +  
Sbjct: 446 TILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIML 505

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ILI+G CK   ++ A  L  +M+S G++PD + Y  L     E   +  
Sbjct: 506 EGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLRE 565

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K F++M   G+      Y   I   C+ G +  A   FR +     E +   YN LI 
Sbjct: 566 ARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 625

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            LC+ GR ++A+  F  +    L+ +  TY ++I     DGK+
Sbjct: 626 ALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLI-----DGKL 663



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 41/312 (13%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A F+++R  G  P+V TYN+L+NG C+ G+   AL LF ++            P  +T
Sbjct: 356 AQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAG------LAPTVLT 409

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +IDG C+ G +++A+ L  +M ++   P+V TY  L+ G          +  F EM+
Sbjct: 410 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEML 469

Query: 123 DQGVQPN-----------------------------------VVSFNVIMNELCKNGKMD 147
            +G++P+                                    V++N++++ LCK G + 
Sbjct: 470 SKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLK 529

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A  L+  MI  G++P+   Y  L+   C  G +  A + F  M S G   +  +Y+++I
Sbjct: 530 DAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVII 589

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           + YC+   +  A   + +ML +G++P+ + YN L   L  + + + A++ F EM   G+ 
Sbjct: 590 HAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLV 649

Query: 268 ADTWAYRTFIDG 279
            + + Y   IDG
Sbjct: 650 PNKYTYTLLIDG 661



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 143/292 (48%), Gaps = 9/292 (3%)

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           F +M    + P+V   N ++     A  W++   +  EM+  G++P++V++N +++   K
Sbjct: 184 FREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSK 243

Query: 143 NGKMDEASRLLELMIQIGVR--PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            G+ D+   LL+ M   G    PN   YN ++ G    G +  A EL   M  +  K + 
Sbjct: 244 EGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMR-LSKKASS 302

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           F+Y+ LI G      ++    L  EM ++GI P VV YN +  GL +  Q+E A   F E
Sbjct: 303 FTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVE 362

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G+  D   Y + ++G CK G   EA+ LF  LR       +  YN LIDG C+ G 
Sbjct: 363 MRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 422

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMI---HALCADGKMDKARDLFLDMEAK 369
           L+ A  L   +     + DV TY I++   H +C+   +   R+ F +M +K
Sbjct: 423 LEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCS---LAMTREFFDEMLSK 471



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 130/270 (48%), Gaps = 11/270 (4%)

Query: 106 CYANDWNEAKC------LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           C A D     C       F EM   GV P+V   N ++  L    + D+ S +   M+Q+
Sbjct: 166 CKARDATPDTCSTLCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQL 225

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYSILINGYCKNKEIE 217
           G+ P+   YNTL+D F   GR ++ + L   ME+ G  C  N  +Y+++I G  +   +E
Sbjct: 226 GIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLE 285

Query: 218 GALSLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A  L  EM LSK  K     YN L  GL     V++   L  EM+  G+      Y   
Sbjct: 286 EAAELVEEMRLSK--KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAM 343

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I GL ++G I  A   F  +R +    D+  YN L++G CK+G  K A  LF  L R  L
Sbjct: 344 IHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGL 403

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
              V+TYNI+I   C  G +++AR L  +M
Sbjct: 404 APTVLTYNILIDGYCRLGDLEEARRLKEEM 433



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 169/369 (45%), Gaps = 44/369 (11%)

Query: 35  TIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPN 94
           + + L+ F EMA+     GV   P+      ++  L      D    +  +M    I P+
Sbjct: 177 STLCLSAFREMAS----HGVA--PDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPS 230

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ--PNVVSFNVIMNELCKNGKMDEASRL 152
           +VTYN+L+  F      ++   L  EM  +G    PN V++NV++  L + G ++EA+ L
Sbjct: 231 IVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAEL 290

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +E M ++  + ++F YN L+ G    G V + ++L + ME+ G    V +Y+ +I+G  +
Sbjct: 291 VEEM-RLSKKASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQ 349

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           + +IE A + + EM + G+ PDV+ YN+L  G  +    + A  LF +++R G+A     
Sbjct: 350 SGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLT 409

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-L 331
           Y   IDG C+ G + EA  L   +       D+  Y  L+ G      L +  E F   L
Sbjct: 410 YNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEML 469

Query: 332 PRGV----------------------------------LIADVVTYNIMIHALCADGKMD 357
            +G+                                  + +D VTYNI+I  LC  G + 
Sbjct: 470 SKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLK 529

Query: 358 KARDLFLDM 366
            A +L + M
Sbjct: 530 DAEELMMQM 538


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 121/351 (34%), Positives = 198/351 (56%), Gaps = 6/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  ++ L + + R GH    + L +E+     EF +  + +  + + +I+  C    V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEI-----EF-LGIEQDIHSLSILINCFCHLHRV 113

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D    +  K+    + P++VT+ +L++G C     ++   L+ +M+ +G+QPNV ++NVI
Sbjct: 114 DFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVI 173

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N L K+GK +EA   L+ M ++G  PN   Y+TL+DG+CL G+++ A  +F  M S GC
Sbjct: 174 INSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGC 233

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV++Y+ L+NGYCK + IE A+ L  E L KG+ PD+V + T+  GL    +   A +
Sbjct: 234 TPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQ 293

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF  +  HG   +   Y   +DGLCK+G + EA  LF+ ++    + ++  Y  LID LC
Sbjct: 294 LFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLC 353

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           K G++K   ELF  L    L  +V TY  ++ ALC +G + +A  LF  ME
Sbjct: 354 KCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKME 404



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 180/342 (52%), Gaps = 6/342 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++  K+   G EP++ T+ TL+NGLC  G     + L+++M           +PN  TY 
Sbjct: 118 SVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG------LQPNVYTYN 171

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            II+ L K G  ++A     +M+     PNVV Y++LI G+C     +EA+ +F  M+ +
Sbjct: 172 VIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSK 231

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  PNV ++  +MN  CK  +++EA +LL+  ++ G+ P+   + T++ G C  GR   A
Sbjct: 232 GCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAA 291

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           ++LF  + + G   N+ +Y +L++G CK+  +E A +L+ EM    +KP++VIY  L   
Sbjct: 292 QQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDS 351

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  +++   +LF  +   G+  + + Y   +  LCK G I+EA +LFR +       D
Sbjct: 352 LCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPD 411

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             AYN +I G  +     +A +L   +      AD  T  ++
Sbjct: 412 KCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 178/358 (49%), Gaps = 6/358 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   G E ++ + + LIN  C        L++  ++     + G+  +P+ VT+TT+++
Sbjct: 87  EIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKIL----KLGL--EPSIVTFTTLLN 140

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC EG +D+   L+  M    + PNV TYN +I+    +   NEA     +M   G  P
Sbjct: 141 GLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVP 200

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV+++ +++  C  G+MDEA  + +LM+  G  PN + Y +LM+G+C   R+  A +L 
Sbjct: 201 NVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLL 260

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
                 G   ++ +++ +I+G C+      A  L+  + + G  P+++ Y  L  GL + 
Sbjct: 261 DETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKH 320

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             +E AF LF EMQR  V  +   Y   ID LCK G I +  ELF  L     + ++  Y
Sbjct: 321 GNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTY 380

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             L+  LCK G +  A +LFR +       D   YN++I           AR L  +M
Sbjct: 381 TALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEM 438



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 147/282 (52%), Gaps = 7/282 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     ++   GC PNV  Y+TLI+G C  G    A ++F+ M +        C PN  
Sbjct: 185 EALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKG------CTPNVY 238

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++++G CK   +++A +L  +   + + P++VT+ ++I G C A     A+ LF  +
Sbjct: 239 TYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYI 298

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN++++ V+++ LCK+G ++EA  L + M +  V+PN  +Y  L+D  C  G++
Sbjct: 299 CAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKI 358

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              +ELF  +   G K NV++Y+ L+   CK   I  A  L+ +M   G  PD   YN +
Sbjct: 359 KDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVI 418

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             G  +      A +L +EM   G +AD  A R  ++    N
Sbjct: 419 IQGFLQHKDPSMARQLVEEMVNRGFSADA-ATRALLNDFPTN 459



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 127/261 (48%)

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
           H   +  D ++A   F  M+ +   P +V F+ + + + + G  +    L + +  +G+ 
Sbjct: 35  HNKVWFKDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIE 94

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
            +    + L++ FC   RV+    +   +  +G + ++ +++ L+NG C   +++  + L
Sbjct: 95  QDIHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMML 154

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           Y +ML +G++P+V  YN +   L +  +   A     +M++ G   +   Y T IDG C 
Sbjct: 155 YDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCL 214

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + EA  +F  +       ++  Y  L++G CK  R++ A +L     R  L+ D+VT
Sbjct: 215 RGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVT 274

Query: 343 YNIMIHALCADGKMDKARDLF 363
           +  +I  LC  G+   A+ LF
Sbjct: 275 FTTIISGLCRAGRPLAAQQLF 295



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 88/173 (50%), Gaps = 6/173 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  LF  +   G  PN+ TY  L++GLC+ G+   A  LF+EM           KPN 
Sbjct: 289 LAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST------VKPNL 342

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT +ID LCK G +   KELF ++ DE + PNV TY +L+   C      EA  LF +
Sbjct: 343 VIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRK 402

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           M + G  P+  ++NVI+    ++     A +L+E M+  G   +A     L D
Sbjct: 403 MEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLND 455



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/223 (22%), Positives = 95/223 (42%), Gaps = 35/223 (15%)

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A     LM+     P    ++ L       G       L   +E +G + ++ S SIL
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN +C    ++  LS+ S++L  G++P +V                              
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIV------------------------------ 133

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                 + T ++GLC  G + + + L+  + +   + ++  YN +I+ L KSG+   A  
Sbjct: 134 -----TFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALG 188

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + + +   + +VV Y+ +I   C  G+MD+AR +F  M +K
Sbjct: 189 FLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSK 231



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/154 (24%), Positives = 70/154 (45%)

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           K+ + AL+ +  ML +   P +V ++ LF  +  +   E    L  E++  G+  D  + 
Sbjct: 41  KDKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSL 100

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I+  C    +   + +   +  L  E  I  +  L++GLC  G++     L+  +  
Sbjct: 101 SILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLV 160

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L  +V TYN++I++L   GK ++A      ME
Sbjct: 161 RGLQPNVYTYNVIINSLSKSGKANEALGFLKQME 194


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 198/376 (52%), Gaps = 16/376 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF +L      P    +N ++  L ++ H    L L ++M     EF  + KPN V
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKM-----EFRGI-KPNLV 98

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC----- 116
               +I+  C+ G +  A  +  K+      PN +T N+LI G C     ++  C     
Sbjct: 99  NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158

Query: 117 -----LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
                LF +M+ + + P+V +F ++++  CK G++ EA  +L +M+  G++P    YN+L
Sbjct: 159 KDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSL 218

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           MDG+ L  +VN+A+ +F +M  +G   ++ SYSILING+CK K ++ A+ L  EM  K I
Sbjct: 219 MDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQI 278

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+VV Y++L  GL +  ++  A KL DEM   G   +   Y + +D LCKN  +  A+ 
Sbjct: 279 IPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIA 338

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   ++    + ++  Y  LI GLC+SG+L+ A ++F  L       +V TY +MI   C
Sbjct: 339 LLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFC 398

Query: 352 ADGKMDKARDLFLDME 367
             G  D+A  L   ME
Sbjct: 399 DKGLFDEALTLLSKME 414



 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/371 (32%), Positives = 192/371 (51%), Gaps = 16/371 (4%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  K+   G +PN+   N LIN  C+ GH   A ++  ++        +  KPNT+T  T
Sbjct: 84  LSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKI------LKMGYKPNTITLNT 137

Query: 66  IIDGLCKEGFV-DK---------AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           +I GLC  G + DK         A +LF KM  ENINP+V T+  L+ GFC      EAK
Sbjct: 138 LIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAK 197

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +   MM QG++P VV++N +M+      ++++A  +   M Q+GV P+   Y+ L++GF
Sbjct: 198 NVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGF 257

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C    ++ A EL   M       NV +YS LI+G CK+ +I  AL L  EM  +G  P++
Sbjct: 258 CKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNI 317

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V Y+++   L + HQV+ A  L  +M+  G+  + + Y   I GLC++G + +A ++F  
Sbjct: 318 VTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFED 377

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           L +  + L++  Y  +I G C  G    A  L   +     I +  TY I+I +L    +
Sbjct: 378 LLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDE 437

Query: 356 MDKARDLFLDM 366
            + A  L  +M
Sbjct: 438 NEMAEKLLCEM 448



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 111/337 (32%), Positives = 180/337 (53%), Gaps = 16/337 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIV-----ALNLFEEMANGNGE 51
            A ++  K+   G +PN  T NTLI GLC  G     H IV     A++LF +M   N  
Sbjct: 115 SAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILEN-- 172

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
                 P+  T+T ++DG CKEG V +AK +   M  + I P VVTYNSL+ G+      
Sbjct: 173 ----INPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQV 228

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           N+AK +F  M   GV P++ S+++++N  CK   MDEA  LL+ M    + PN   Y++L
Sbjct: 229 NKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSL 288

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C +G+++ A +L   M   G   N+ +YS +++  CKN +++ A++L ++M ++GI
Sbjct: 289 IDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGI 348

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P++  Y  L  GL +  ++E A K+F+++   G   + + Y   I G C  G   EA+ 
Sbjct: 349 QPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALT 408

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           L   +       + + Y  +I  L K    ++A +L 
Sbjct: 409 LLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/302 (30%), Positives = 169/302 (55%), Gaps = 10/302 (3%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A  LF ++  +N  P  + +N ++     +  ++    L  +M  +G++PN+V+ N+
Sbjct: 43  VDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 102

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN----------RAE 185
           ++N  C+ G +  A  +L  ++++G +PN    NTL+ G CL G+++           A 
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +LF  M       +V++++IL++G+CK   ++ A ++ + M+ +GIKP VV YN+L  G 
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           F + QV +A  +F+ M + GV+ D  +Y   I+G CK   + EA+EL + +   +   ++
Sbjct: 223 FLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNV 282

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y+ LIDGLCKSG++  A +L   +       ++VTY+ ++ ALC + ++D A  L   
Sbjct: 283 VTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQ 342

Query: 366 ME 367
           M+
Sbjct: 343 MK 344



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 78/245 (31%), Positives = 130/245 (53%), Gaps = 6/245 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F  +   G  P++ +Y+ LING C+      A+ L +EM +          PN V
Sbjct: 230 KAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ------IIPNVV 283

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++IDGLCK G +  A +L  +M D    PN+VTY+S++   C  +  + A  L  +M
Sbjct: 284 TYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQM 343

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QG+QPN+ ++ +++  LC++GK+++A ++ E ++  G   N + Y  ++ GFC  G  
Sbjct: 344 KNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLF 403

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   ME  GC  N  +Y I+I    K  E E A  L  EM+       V + N L
Sbjct: 404 DEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDL 463

Query: 242 FIGLF 246
              ++
Sbjct: 464 IASIW 468



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 63/208 (30%), Positives = 97/208 (46%), Gaps = 29/208 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  L  ++      PNV TY++LI+GLC++G    AL L +EM +      +V      
Sbjct: 265 EAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 324

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                    PN  TYT +I GLC+ G ++ A+++F  +  +  N
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHN 384

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            NV TY  +I GFC    ++EA  L  +M D G  PN  ++ +I+  L K  + + A +L
Sbjct: 385 LNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKL 444

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           L  MI+        + N L+    +TG 
Sbjct: 445 LCEMIETNFDGRVALTNDLIASIWVTGS 472


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 197/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++  G  P + T N+L++   +   T  A  L+ EM      F +  K +  
Sbjct: 169 EAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM------FRLRIKSSVY 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+ LCKEG + KAK+    M+   + PN+VTYN+++HG+C +     A  +   M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q ++P+  ++  +++ +CK G+++EAS++ E M+Q G+RP+A +YNTL+DGFC  G +
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M   G    + +Y+ LI+     +  + A  +  E+  KGI PD + YN L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G       ++AF L DEM   G+      Y + +  L K   + EA +LF+ +     
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +N LIDG C +  +K A+EL + + R  +  D VT+N ++   C +GK+++AR+
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 362 LFLDMEAK 369
           LF +M+ +
Sbjct: 523 LFDEMKRR 530



 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 181/349 (51%), Gaps = 6/349 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A+   ++    EP+ FTY +LI+G+C+ G    A  +FEEM           +P+ V 
Sbjct: 275 ADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKG------LRPSAVI 328

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C +G +D A     +M  + I+P + TYNSLIH        +EA+C+  E+ 
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQ 388

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P+ +++N+++N  C+     +A  L + M+  G++P    Y +L+       R+ 
Sbjct: 389 EKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMK 448

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++LF  + S G   +   ++ LI+G+C N  ++GA  L  +M    + PD V +NT+ 
Sbjct: 449 EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIM 508

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     +VE A +LFDEM+R G+  D  ++ T I G  + G I +A  +   +    + 
Sbjct: 509 QGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFN 568

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
             +  YN L+ GLCK+    +A EL + +    +  D  TY  +I  + 
Sbjct: 569 PTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 135/249 (54%), Gaps = 8/249 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +  +++  G  P+  TYN LING CR  +   A  L +EM A+G        KP  
Sbjct: 379 EAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG-------IKPTK 431

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TYT+++  L K+  + +A +LF K+  E + P+ + +N+LI G C  ++   A  L  +
Sbjct: 432 KTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKD 491

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    V P+ V+FN IM   C+ GK++EA  L + M + G++P+   +NTL+ G+   G 
Sbjct: 492 MDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGD 551

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  +   M   G    V +Y+ L+ G CKN+E + A  L  EM+SKG+ PD   Y T
Sbjct: 552 IKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFT 611

Query: 241 LFIGLFEIH 249
           L  G+ +++
Sbjct: 612 LIEGIAKVN 620



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 124/267 (46%), Gaps = 17/267 (6%)

Query: 118 FIEMMDQGVQPNVVSFNVI-MNELCK---------NGKMDEASRLLELMIQIGVRPNAFV 167
           FI+ ++  + P+++S  ++ ++E  +         + K+ +A  L   ++ +   P+   
Sbjct: 56  FIKQVESSLTPSLISQTLLNLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKP 115

Query: 168 YNTLMDGFCLTGRVNRAEELF----VSMESMGCKHN-VFSYSILINGYCKNKEIEGALSL 222
              L+      G  N   E+F     S + +G K + VF Y  LI   C     + A   
Sbjct: 116 ALHLLRQALGGGTTNSIREIFEFLAASRDRLGFKSSIVFDY--LIKSCCDMNRADEAFEC 173

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +  M  KG+ P +   N+L     ++++ E A+ L+ EM R  + +  + +   I+ LCK
Sbjct: 174 FYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCK 233

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + +A +    +     + +I  YN ++ G C SGR++ A  +  ++ R  +  D  T
Sbjct: 234 EGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFT 293

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           Y  +I  +C  G++++A  +F +M  K
Sbjct: 294 YGSLISGMCKQGRLEEASKIFEEMVQK 320



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 41/182 (22%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G  P+   +N LI+G C   +   A  L ++M        +   P+ V
Sbjct: 449 EADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDR------MKVPPDEV 502

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMK---------------------------------- 87
           T+ TI+ G C+EG V++A+ELF +MK                                  
Sbjct: 503 TFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEM 562

Query: 88  -DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
            D   NP V+TYN+L+ G C   + + A+ L  EM+ +G+ P+  ++  ++  + K    
Sbjct: 563 LDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622

Query: 147 DE 148
           DE
Sbjct: 623 DE 624



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++  G +P+  ++NTLI+G  R G    A  +  EM +          P  +
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTG------FNPTVL 572

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           TY  ++ GLCK    D A+EL  +M  + + P+  TY +LI G    N  +E K
Sbjct: 573 TYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENK 626


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/361 (33%), Positives = 193/361 (53%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +++  G  PN++TY   I  L R      A  +F+EM +        C P+ +TYT 
Sbjct: 257 LLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEG------CGPDVITYTV 310

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +ID LC  G +DKAKEL++KM+  + +P+ VTY +L+  F    D    K  + EM   G
Sbjct: 311 LIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDG 370

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+VV++ +++  LCK+G +D A  +L++M   G+ PN   YNT++ G     R++ A 
Sbjct: 371 YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEAL 430

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           EL  +MES+G K   FSY + I+ Y K+ +   A+  +  M  +GI P +   N     L
Sbjct: 431 ELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTL 490

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            E  ++  A  +F+++ + G++ D+  Y   +    K G I +A +L   +     E D+
Sbjct: 491 AETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDV 550

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
              N LI+ L K+GR+  AW++F  L    L   VVTYNI++  L  +GK+ KA +LF  
Sbjct: 551 MIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGS 610

Query: 366 M 366
           M
Sbjct: 611 M 611



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 200/401 (49%), Gaps = 41/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   GC P+V TY  LI+ LC  G    A  L+ +M   +        P+ V
Sbjct: 288 DAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHS------PDRV 341

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D   K G ++  K  + +M+ +   P+VVTY  LI   C + D + A  +   M
Sbjct: 342 TYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVM 401

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF------ 175
             +G+ PN+ ++N ++  L K  ++DEA  LLE M  +GV+P AF Y   +D +      
Sbjct: 402 TTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDP 461

Query: 176 -----------------------------CLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                          TGR++ AE++F  +   G   +  +Y++L
Sbjct: 462 AKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNML 521

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +  Y K  +I+ A  L SEM+SKG +PDV+I N+L   L++  +V+ A+K+F  ++   +
Sbjct: 522 MKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A     Y   + GL K G I++A+ELF ++       +   +N L+D L K+  + +A +
Sbjct: 582 APTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALK 641

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +F  +       DV+TYN +I+ L  +G++D A   F  M+
Sbjct: 642 MFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK 682



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 172/318 (54%), Gaps = 6/318 (1%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  LF  ++  G  PN FTYN L++   ++       +L+ EM +        C+PN +
Sbjct: 814  KALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRG------CEPNAI 867

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            T+  II  L K   ++KA +L+ ++   + +P   TY  LI G   A    +A  +F EM
Sbjct: 868  THNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEM 927

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +D G  PN V +N+++N   K+G++D A  L + M++ G+RP+   Y  L++  C+TGR+
Sbjct: 928  LDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRI 987

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            + A + F  ++  G   +  SY+ +ING  K++ ++ ALSL+SEM ++GI PD+  YN L
Sbjct: 988  DEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNAL 1047

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             + L    +V+ A K+++E+Q  G+    + Y   I G   +G   +A  +F+ + ++  
Sbjct: 1048 ILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGC 1107

Query: 302  ELDIRAYNCLIDGLCKSG 319
              +   +  L +   ++G
Sbjct: 1108 SPNTETFAQLPNKYPRAG 1125



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 7/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N ++YN LI+ L   G    AL +++ M +         KP+  TY+ ++  L + G   
Sbjct: 200 NAYSYNGLIH-LLLPGFCNEALKVYKRMISEG------MKPSMKTYSALMVALGRRGDTR 252

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K   L  +MK   + PN+ TY   I     A   ++A  +F EM D+G  P+V+++ V++
Sbjct: 253 KIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLI 312

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + LC  GK+D+A  L   M      P+   Y TLMD F   G +   +  +  ME  G  
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +V +Y+ILI   CK+ +++ A  +   M +KGI P++  YNT+  GL +  +++ A +L
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALEL 432

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            + M+  GV    ++Y  FID   K+G   +A++ F T++       I A N  +  L +
Sbjct: 433 LENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAE 492

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +GR+  A ++F  L +  L  D VTYN+++      G++DKA  L  +M +K
Sbjct: 493 TGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISK 544



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 174/342 (50%), Gaps = 5/342 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
            LI  LC+    + A N+F++     G       P   +Y  ++DGL    F +KA ELF 
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLG-----IHPTLESYNCLMDGLLGSNFTEKALELFE 820

Query: 85   KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
             MK    +PN  TYN L+     +   N+   L+ EM  +G +PN ++ N+I++ L K+ 
Sbjct: 821  DMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSN 880

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             +++A  L   ++     P    Y  L+DG    GR  +A ++F  M   GC  N   Y+
Sbjct: 881  NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILING+ K+ EI+ A  L+ +M+ +GI+PD+  Y  L   L    +++ A + F+E++  
Sbjct: 941  ILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT 1000

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            G+  DT +Y   I+GL K+  + EA+ LF  ++      D+  YN LI  L  +G++ +A
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060

Query: 325  WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             +++  L    L   V TYN +I      G  D+A  +F  M
Sbjct: 1061 VKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKM 1102



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/404 (27%), Positives = 193/404 (47%), Gaps = 44/404 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF  +   GC PN  T+N+L++ L +     +AL +F  M   N      C P+ 
Sbjct: 602 LKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN------CNPDV 655

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY TII GL +EG +D A   F +MK + ++P+ VT  +LI G        +A  + +E
Sbjct: 656 LTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRVEDAIKVVME 714

Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMI---------------------- 157
            + Q  +Q N   +  +M  +    +++EA    E+++                      
Sbjct: 715 FVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRK 774

Query: 158 --------------QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
                          +G+ P    YN LMDG   +    +A ELF  M+S G   N F+Y
Sbjct: 775 KALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTY 834

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           ++L++ + K+K I     LYSEM S+G +P+ + +N +   L + + + +A  L+ E+  
Sbjct: 835 NLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS 894

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
              +     Y   IDGL K G   +A+++F  +       +   YN LI+G  KSG +  
Sbjct: 895 GDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDF 954

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           A ELF+ + +  +  D+ +Y I++  LC  G++D+A   F +++
Sbjct: 955 ACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 175/351 (49%), Gaps = 7/351 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++ V G  P+V TY  LI  LC++G    A ++ + M    G F     PN  TY T+I 
Sbjct: 365 EMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTT-KGIF-----PNLHTYNTMIC 418

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GL K   +D+A EL   M+   + P   +Y   I  +  + D  +A   F  M  +G+ P
Sbjct: 419 GLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMP 478

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           ++ + N  +  L + G++ EA  +   + + G+ P++  YN LM  +   G++++A +L 
Sbjct: 479 SIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLL 538

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M S GC+ +V   + LIN   K   ++ A  ++  + +  + P VV YN L  GL + 
Sbjct: 539 SEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKE 598

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++ +A +LF  M   G   +T  + + +D L KN  +  A+++F  + ++    D+  Y
Sbjct: 599 GKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTY 658

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           N +I GL + GR+  A+  F  + +  L  D VT   +I  +   G+++ A
Sbjct: 659 NTIIYGLIREGRIDYAFWFFHQMKK-FLSPDYVTLCTLIPGVVRHGRVEDA 708



 Score =  147 bits (370), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 162/314 (51%), Gaps = 2/314 (0%)

Query: 55   VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNE 113
            VC+ + V    +I  LCK      A+ +F K  K+  I+P + +YN L+ G   +N   +
Sbjct: 756  VCQDDHVMLP-LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEK 814

Query: 114  AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
            A  LF +M   G  PN  ++N++++   K+ ++++   L   M   G  PNA  +N ++ 
Sbjct: 815  ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874

Query: 174  GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
                +  +N+A +L+  + S        +Y  LI+G  K    E A+ ++ EML  G  P
Sbjct: 875  ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGP 934

Query: 234  DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            + VIYN L  G  +  +++ A +LF +M + G+  D  +Y   ++ LC  G I EAV+ F
Sbjct: 935  NSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYF 994

Query: 294  RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
              L++   + D  +YN +I+GL KS RL  A  LF  +    +  D+ TYN +I  L   
Sbjct: 995  EELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIA 1054

Query: 354  GKMDKARDLFLDME 367
            GK+D A  ++ +++
Sbjct: 1055 GKVDVAVKMYEELQ 1068



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 172/370 (46%), Gaps = 9/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  L   G  P+  TYN L+    + G    A  L  EM +        C+P+ +
Sbjct: 498 EAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG------CEPDVM 551

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
              ++I+ L K G VD A ++F ++K+  + P VVTYN L+ G        +A  LF  M
Sbjct: 552 IINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSM 611

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PN ++FN +++ L KN  +D A ++   M  +   P+   YNT++ G    GR+
Sbjct: 612 TESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRI 671

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNT 240
           + A   F  M+      +  +   LI G  ++  +E A+ +  E + +  ++ +   +  
Sbjct: 672 DYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGE 730

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRIL 299
           L   +    ++E A    + +  + V  D       I  LCK    ++A  +F +  + L
Sbjct: 731 LMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNL 790

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                + +YNCL+DGL  S   + A ELF  +       +  TYN+++ A     +++K 
Sbjct: 791 GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKL 850

Query: 360 RDLFLDMEAK 369
            DL+ +M ++
Sbjct: 851 YDLYSEMRSR 860



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 6/180 (3%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  LF K+   G  P++ +Y  L+  LC TG    A+  FEE+     +      P+TV+
Sbjct: 955  ACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD------PDTVS 1008

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            Y  II+GL K   +D+A  LF +MK+  I+P++ TYN+LI     A   + A  ++ E+ 
Sbjct: 1009 YNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQ 1068

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              G++P+V ++N ++     +G  D+A  + + M+ +G  PN   +  L + +   G V+
Sbjct: 1069 LVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVH 1128


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 184/349 (52%), Gaps = 6/349 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  L+   C+      A+ L +EM +        C P+ VTY  +++G+C+EG
Sbjct: 191 CVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEG 244

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD A E    +      PN V+YN ++ G C A  W +A+ L  EM  +G  PNVV+FN
Sbjct: 245 RVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFN 304

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++++ LC+ G ++ A  +LE + + G  PN+  YN L+  FC   ++++A      M S 
Sbjct: 305 MLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSR 364

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ SY+ L+   C++ E++ A+ L  ++  KG  P ++ YNT+  GL +  + + A
Sbjct: 365 GCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEA 424

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L +EM   G+  D   Y T   GLC+   I +A+  F  ++ +    +   YN +I G
Sbjct: 425 LELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILG 484

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCK      A +LF  +     + +  TY I+I  L  +G + +ARDL 
Sbjct: 485 LCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 533



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 181/351 (51%), Gaps = 6/351 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E + +T +TLI GLC  G T  AL + +EM          C P+ VTYT +++  CK   
Sbjct: 157 ERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRR------CVPDVVTYTILLEATCKRSG 210

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             +A +L  +M+D+   P++VTYN +++G C     ++A      +   G +PN VS+N+
Sbjct: 211 YKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNI 270

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC   + ++A  L+  M Q G  PN   +N L+   C  G V  A E+   +   G
Sbjct: 271 VLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYG 330

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  N  SY+ L++ +CK K+++ A++    M+S+G  PD+V YNTL   L    +V+ A 
Sbjct: 331 CSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAV 390

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +++  G A    +Y T IDGL K G   EA+EL   +     + DI  Y+ +  GL
Sbjct: 391 ELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGL 450

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C+  R++ A   F  +    +  + V YN +I  LC   +   A DLF  M
Sbjct: 451 CREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 501



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/330 (33%), Positives = 178/330 (53%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  GC P++ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTV 266

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++ GLC     + A+EL  +M  +   PNVVT+N LI   C       A  +  ++
Sbjct: 267 SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 326

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N +++  CK  KMD+A   L+LM+  G  P+   YNTL+   C +G V
Sbjct: 327 PKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 386

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++PD++ Y+T+
Sbjct: 387 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 446

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF  +     
Sbjct: 447 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 506

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
             +   Y  LI+GL   G +K A +L   L
Sbjct: 507 MPNESTYTILIEGLAYEGLIKEARDLLDEL 536



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 170/362 (46%), Gaps = 16/362 (4%)

Query: 10  LRVFGC--EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           LR+ G    P+  T   LI  L  +G T  A  +              C P+ + Y  ++
Sbjct: 87  LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVL-----------AACGPDVMAYNAMM 135

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            G C  G VD A+       +  +  +  T ++LI G C       A  +  EM+ +   
Sbjct: 136 AGYCGAGQVDAARRW---CAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCV 192

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+VV++ +++   CK     +A +LL+ M   G  P+   YN +++G C  GRV+ A E 
Sbjct: 193 PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEF 252

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
             ++ S GC+ N  SY+I++ G C  +  E A  L  EM  KG  P+VV +N L   L  
Sbjct: 253 LKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCR 312

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
              VE A ++ +++ ++G + ++ +Y   +   CK   + +A+     +       DI +
Sbjct: 313 KGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVS 372

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN L+  LC+SG + +A EL   L        +++YN +I  L   GK  +A +L  +M 
Sbjct: 373 YNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMV 432

Query: 368 AK 369
           +K
Sbjct: 433 SK 434



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 138/264 (52%), Gaps = 6/264 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GC PNV T+N LI+ LCR G    AL + E++     ++G  C PN++
Sbjct: 283 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIP----KYG--CSPNSL 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++   CK+  +DKA      M      P++V+YN+L+   C + + + A  L  ++
Sbjct: 337 SYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQL 396

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P ++S+N +++ L K GK  EA  LL  M+  G++P+   Y+T+  G C   R+
Sbjct: 397 KDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRI 456

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A   F  ++ MG + N   Y+ +I G CK +E   A+ L++ M+  G  P+   Y  L
Sbjct: 457 EDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG 265
             GL     ++ A  L DE+   G
Sbjct: 517 IEGLAYEGLIKEARDLLDELCSRG 540


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 215/414 (51%), Gaps = 50/414 (12%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A ++  K+  +GC PNV T+ TL+ G C     + AL +++EM      F  V       
Sbjct: 108 AFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLIN 167

Query: 56  -------------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                                     KPN + Y T++ GLCK+G +++A+ L  KM  + 
Sbjct: 168 GLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQG 227

Query: 91  INPNVVTYNSLIHG----------------FCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           I P++ TY+SLI+G                FC  N  +EA+ LF  M+++G Q +++++N
Sbjct: 228 IFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYN 287

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++MN  C N K+ EA +L  +M++ G +P+   Y  LM G+CL  +V+ A  LF  M   
Sbjct: 288 ILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIER 347

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +V+SY+ILI GYCK + +  A++L  +M  K + P+++ YN++  GL +   +  A
Sbjct: 348 GLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDA 407

Query: 255 FKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-YELDIRAYNCLI 312
           +KL DEM        D   Y   ++ LC+   + +A+  F+ L   + +  ++ +YN LI
Sbjct: 408 WKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFERSFAPNVWSYNILI 467

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G CK+ RL  A  LF  +    L+ D+VTYNI++ AL    ++DKA  L + +
Sbjct: 468 SGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQI 521



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 197/385 (51%), Gaps = 34/385 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+  +   G  P   T+N LIN  C  G    A ++  ++     ++G  C+PN VT
Sbjct: 73  AIDLYTLMEYKGVVPFTVTFNILINCFCHMGQMDFAFSVMGKIL----KWG--CRPNVVT 126

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIEM 121
           +TT++ G C    +  A  ++ +M    I  + V Y +LI+G C +      A    ++ 
Sbjct: 127 FTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQK 186

Query: 122 MD--QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN---------- 169
           M+  Q V+PN++ +N +++ LCK+G ++EA  L   MI  G+ P+ F Y+          
Sbjct: 187 MEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAG 246

Query: 170 ------TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
                 +L++GFCL  +V+ A ELF  M   G +H++ +Y+IL+NGYC N ++  A  L+
Sbjct: 247 QRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLF 306

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             M+ +G +PD + Y  L  G   I +V+ A  LF  M   G+  D W+Y   I G CK 
Sbjct: 307 HMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKF 366

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-----PRGVLIA 338
             + EA+ L   + +     +I  YN ++DGLCKSG +  AW+L   +     P      
Sbjct: 367 ERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPP----P 422

Query: 339 DVVTYNIMIHALCADGKMDKARDLF 363
           DV TYNI++ +LC    ++KA   F
Sbjct: 423 DVTTYNILLESLCRIECVEKAIAFF 447



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 183/367 (49%), Gaps = 53/367 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLF------------EEMANGN 49
           EA  L  K+ V G  P++FTY++LI GLCR G      +L              E+ N  
Sbjct: 215 EARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVM 274

Query: 50  GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
            E G   + + + Y  +++G C    V +A++LF  M +    P+ +TY  L+HG+C  +
Sbjct: 275 IERGE--QHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLID 332

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
             +EA+ LF  M+++G+ P+V S+N+++   CK  ++ EA  LLE M    + PN   YN
Sbjct: 333 KVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNIITYN 392

Query: 170 TLMDGFCLTGRVNRAEELFVSME--------------------SMGC--------KH--- 198
           +++DG C +G +  A +L   M                      + C        KH   
Sbjct: 393 SVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIF 452

Query: 199 ------NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 NV+SY+ILI+G CKN+ ++ A++L++ M  K + PD+V YN L   LF   Q++
Sbjct: 453 ERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLD 512

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A  L  ++   G++ +   Y   I+GL K G    A ++   L I  Y  D++ Y  +I
Sbjct: 513 KAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISLYLSIRGYHPDVKTY--II 570

Query: 313 DGLCKSG 319
           + LCK G
Sbjct: 571 NELCKGG 577


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 206/368 (55%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ LF +    G   NVFTYN+L++ LC+ G    A +++E+M       GV  +P+ V
Sbjct: 417 EASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRK----GV--RPSVV 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I G C++G +D A  +F++M ++ + PN++TY+ L+ G+    D   A  L+  M
Sbjct: 470 SYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM 529

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+  + N+I+N LCK G+  E+   L+ ++Q G  P    YN ++DGF   G V
Sbjct: 530 RGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSV 589

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  ++  M  +G   NVF+Y+ LING+CK+  ++ AL +  EM +KGI+ DV +Y  L
Sbjct: 590 NSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCAL 649

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      +  A +L  E+Q  G++ +   Y + I G  K   +  A+ L + +     
Sbjct: 650 IDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGI 709

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D++ Y  LI GL K G+L  A EL+  +    ++ D++TY+++IH LC  G+++ A+ 
Sbjct: 710 PCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQK 769

Query: 362 LFLDMEAK 369
           +  DM+ K
Sbjct: 770 ILEDMDRK 777



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 188/367 (51%), Gaps = 7/367 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++   G   NV    TL+ G C+ G    AL LF++M N NG    +C PN 
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKM-NENG----IC-PNN 364

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  II+  CK G +DKA E++ +MK+++I+P V   NSLI G+  A    EA  LF E
Sbjct: 365 VTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDE 424

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +  G+  NV ++N +++ LCK GKM EA  + E M++ GVRP+   YN ++ G C  G 
Sbjct: 425 AVACGIA-NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGD 483

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +FV M   G K N+ +YS+L++GY K  + E A  LY  M  + I P     N 
Sbjct: 484 MDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNI 543

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +   +     ++ + G       Y   IDG  K G +  A+ ++  +  + 
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG 603

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  Y  LI+G CKS  + +A ++   +    +  DV  Y  +I   C  G M  A 
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNAS 663

Query: 361 DLFLDME 367
            L  +++
Sbjct: 664 QLLSELQ 670



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +++ K+   G  P+V +YN +I G C+ G    A  +F EM     E G+  KPN +
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEML----EKGL--KPNLI 504

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ ++DG  K+G  + A  L+ +M+ ENI P+  T N +I+G C A   +E++    ++
Sbjct: 505 TYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P  +++N I++   K G ++ A  +   M +IGV PN F Y  L++GFC +  +
Sbjct: 565 VQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNM 624

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M++ G + +V  Y  LI+G+C+  ++  A  L SE+   G+ P+ V+Y+++
Sbjct: 625 DLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSM 684

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  +E A  L   M   G+  D   Y T I GL K G ++ A EL+  +     
Sbjct: 685 ISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGI 744

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  Y+ LI GLC  G+L+ A ++   + R  +   V  YN +I     +G + +A  
Sbjct: 745 MPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFR 804

Query: 362 LFLDM 366
           L  +M
Sbjct: 805 LHNEM 809



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 181/354 (51%), Gaps = 6/354 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F+++   G +PN+ TY+ L++G  + G T  A  L++ M   N        P+  T
Sbjct: 487 ANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGEN------IAPSDFT 540

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              II+GLCK G   ++++   K+  E   P  +TYN +I GF      N A  ++ EM 
Sbjct: 541 CNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMC 600

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV PNV ++  ++N  CK+  MD A ++++ M   G+  +  VY  L+DGFC  G + 
Sbjct: 601 KIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMV 660

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L   ++ +G   N   YS +I+G+ K + +E AL L+  M+++GI  D+ IY TL 
Sbjct: 661 NASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLI 720

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  ++  A +L+ EM   G+  D   Y   I GLC  G +  A ++   +      
Sbjct: 721 SGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMT 780

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
             +  YN LI G  K G L+ A+ L   +    L+ D  TY+I+++    DG +
Sbjct: 781 PTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 170/353 (48%), Gaps = 7/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +   N  ++ L +      A +++ +MA+     GV  K +  T + +I    +EG +
Sbjct: 187 PCLTVMNIFLSELVKNNMIREARDVYNKMASK----GV--KGDCATISVMIRASMREGKL 240

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A+  F + K++ +  +   Y+ +I   C   D   A  L  EM D+G  P+ V F  +
Sbjct: 241 EEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRV 300

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    K GKM EA ++   M+  G   N  V  TLM G+C  G ++ A ELF  M   G 
Sbjct: 301 IGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGI 360

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N  +Y+++I   CKN  ++ A  +Y++M +K I P V   N+L  G  +    E A K
Sbjct: 361 CPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASK 420

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LFDE    G+ A+ + Y + +  LCK G + EA  ++  +        + +YN +I G C
Sbjct: 421 LFDEAVACGI-ANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHC 479

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + G +  A  +F  +    L  +++TY++++      G  + A  L+  M  +
Sbjct: 480 QQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGE 532



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 141/341 (41%), Gaps = 69/341 (20%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N L++ +      N+A   F  ++++ + P +   N+ ++EL KN  + EA  +   M 
Sbjct: 157 FNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARDVYNKMA 216

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             GV+ +    + ++      G++  AE  F   ++ G + +  +YSI+I   CK  +  
Sbjct: 217 SKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSV 276

Query: 218 GALSLYSEMLSKGIKP-----------------------------------DVVIYNTLF 242
            AL L  EM  KG  P                                   +VV+  TL 
Sbjct: 277 AALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLM 336

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR----- 297
            G  +   ++ A +LFD+M  +G+  +   Y   I+  CKNG + +A E++  ++     
Sbjct: 337 KGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDIS 396

Query: 298 --------ILKYELDIRA---------------------YNCLIDGLCKSGRLKIAWELF 328
                   +++  L  R+                     YN L+  LCK G++  A  ++
Sbjct: 397 PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIW 456

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + R  +   VV+YN MI   C  G MD A  +F++M  K
Sbjct: 457 EKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEK 497



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 108/255 (42%), Gaps = 35/255 (13%)

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
           +RL+E   ++    ++ V+N L++ +  T R+N A + F S+        +   +I ++ 
Sbjct: 139 ARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSE 198

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             KN  I  A  +Y++M SKG+K D    + +        ++E A   F E +  GV  D
Sbjct: 199 LVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELD 258

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKY---------------------------- 301
             AY   I+ +CK    V A+ L R +R   +                            
Sbjct: 259 ARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKG 318

Query: 302 -------ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
                   +++     L+ G CK G L  A ELF  +    +  + VTY ++I   C +G
Sbjct: 319 EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG 378

Query: 355 KMDKARDLFLDMEAK 369
            MDKA +++  M+ K
Sbjct: 379 NMDKAYEIYNQMKNK 393


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 187/349 (53%), Gaps = 6/349 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  LI   C       A+ L +EM +        CKP+ VTY  +++G+CKEG
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRG------CKPDVVTYNVLVNGMCKEG 65

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A +    M      PNV+T+N ++   C    W +A+ L  EM+ +G  P+VV+FN
Sbjct: 66  RLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFN 125

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++N LC+ G +  A  +LE M   G  PN+  YN L+ GFC   +++RA +    M S 
Sbjct: 126 ILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ ++   CK+ +++ A+ L +++ SKG  P ++ YNT+  GL ++ + ++A
Sbjct: 186 GCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQA 245

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L  EM+  G+  D   Y + I GL + G + EA++ F  +     + +   YN ++ G
Sbjct: 246 VELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFG 305

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCK+ +   A +    +         V+Y I+I  +  +G   +A +L 
Sbjct: 306 LCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELL 354



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 170/314 (54%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C P+ +TYT +I+  C E  V +A +L  +M      P+VVTYN L++G C     +EA 
Sbjct: 12  CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
                M   G QPNV++ N+I+  +C  G+  +A +LL  M++ G  P+   +N L++  
Sbjct: 72  KFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFL 131

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G + RA ++   M + GC  N  SY+ L++G+CK K+++ A+     M+S+G  PD+
Sbjct: 132 CRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDI 191

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V YNT+   L +  +V+ A +L +++   G +     Y T IDGL K G   +AVEL   
Sbjct: 192 VTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHE 251

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +R    + D+  Y+ LI GL + G+++ A + F  +    +  +  TYN ++  LC   +
Sbjct: 252 MRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQ 311

Query: 356 MDKARDLFLDMEAK 369
            D+A D    M +K
Sbjct: 312 TDRAIDFLAYMISK 325



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 176/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GC+P+V TYN L+NG+C+ G    A+     M +    +G   +PN +
Sbjct: 34  QAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPS----YG--SQPNVI 87

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  I+  +C  G    A++L  +M  +  +P+VVT+N LI+  C       A  +  +M
Sbjct: 88  THNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKM 147

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N +++  CK  KMD A + LE+M+  G  P+   YNT++   C  G+V
Sbjct: 148 PTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKV 207

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   + S GC   + +Y+ +I+G  K  + + A+ L  EM  KG+KPDV+ Y++L
Sbjct: 208 DAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSL 267

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +VE A K F +++  GV  + + Y + + GLCK      A++    +     
Sbjct: 268 IAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGC 327

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
           +    +Y  LI+G+   G  K A EL   L  RGV+
Sbjct: 328 KPTEVSYTILIEGIANEGLAKEALELLNELCSRGVV 363



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 152/288 (52%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           E+  +  ++   P+V+TY  LI   C  +   +A  L  EM  +G +P+VV++NV++N +
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G++DEA + L  M   G +PN   +N ++   C TGR   AE+L   M   GC  +V
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +++ILIN  C+   +  A+ +  +M + G  P+ + YN L  G  +  +++RA +  + 
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G   D   Y T +  LCK+G +  AVEL   L        +  YN +IDGL K G+
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              A EL   +    L  DV+TY+ +I  L  +GK+++A   F D+E 
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEG 289



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 146/277 (52%), Gaps = 6/277 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L  ++   GC P+V T+N LIN LCR G    A+++ E+M          C PN+
Sbjct: 103 MDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHG------CTPNS 156

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G CKE  +D+A +    M      P++VTYN+++   C     + A  L  +
Sbjct: 157 LSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQ 216

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK D+A  LL  M   G++P+   Y++L+ G    G+
Sbjct: 217 LSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGK 276

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A + F  +E  G K N F+Y+ ++ G CK ++ + A+   + M+SKG KP  V Y  
Sbjct: 277 VEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTI 336

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L  G+      + A +L +E+   GV   + A +  +
Sbjct: 337 LIEGIANEGLAKEALELLNELCSRGVVKKSSAEQVVV 373



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 70/147 (47%)

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + +    L K   PDV+ Y  L         V +A KL DEM   G   D   Y   ++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           +CK G + EA++   ++     + ++  +N ++  +C +GR   A +L   + R      
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           VVT+NI+I+ LC  G + +A D+   M
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKM 147


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/350 (33%), Positives = 195/350 (55%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E NV+T N ++N LC+ G      +   EM  GNG +      + VTY T+I   C+E
Sbjct: 113 GIELNVYTLNIMVNALCKDGKFDDVKSFLSEM-EGNGIYA-----DMVTYNTLIGAYCRE 166

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A E+   M D+ + P++ TYN++I+G C    +  AK + IEM++ G+ P+  ++
Sbjct: 167 GLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTY 226

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++ E C+     EA  +   M++ GV P+   +++L+  F     +++A   F  M+ 
Sbjct: 227 NTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKK 286

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +   Y++L++GYC+N  +  AL +  EML +G   DV+ YNT+  GL +   +  
Sbjct: 287 FGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTD 346

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KLFDEM   G   D + + T I G C++G + +A+ LF T+     + DI AYN LID
Sbjct: 347 ADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G CK G ++ A EL+  +    +  + +TY I+I+A C+ G + +A  L+
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLW 456



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 41/381 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P++FTYN +INGLC+ G    A  +  EM N      +   P+T TY T++   C+ 
Sbjct: 183 GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN------IGLSPDTTTYNTLLVESCRR 236

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLI------------------------------- 102
               +AKE+F +M  + + P++V+++SLI                               
Sbjct: 237 DNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 296

Query: 103 ----HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
               HG+C   +  EA  +  EM++QG   +V+++N I+N LCK   + +A +L + M++
Sbjct: 297 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 356

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  P+ + + TL+ G C  G + +A  LF +M     K ++ +Y+ LI+G+CK  E+E 
Sbjct: 357 RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK 416

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L+  M+S+ I P+ + Y  L      +  V  AF+L+D M   G+        T I 
Sbjct: 417 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 476

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G C++G   +A E    +       D  +YN LI+G  +   +  A+     + +  L+ 
Sbjct: 477 GYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLP 536

Query: 339 DVVTYNIMIHALCADGKMDKA 359
           D++TYN++++  C  G+M +A
Sbjct: 537 DIITYNVVMNGFCRQGRMQEA 557



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 172/340 (50%), Gaps = 7/340 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  ++ FG  P+   Y  L++G CR G+ + AL + +EM          C  + +
Sbjct: 276 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQG------CVLDVI 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TI++GLCKE  +  A +LF +M +    P+  T+ +LIHG C   +  +A  LF  M
Sbjct: 330 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P++V++N +++  CK G+M++AS L + MI   + PN   Y  L++ +C  G V
Sbjct: 390 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L+  M   G K  + + + +I GYC++ +   A      M++KG+ PD + YNTL
Sbjct: 450 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      +++AF   ++M++ G+  D   Y   ++G C+ G + EA  + R +     
Sbjct: 510 INGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGI 569

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADV 340
             D   Y  LI+G      L  A+      L RG    DV
Sbjct: 570 NPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609



 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 182/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E    F  LR  G   ++   N+L+ GL +     +A  +  E+     E       N  
Sbjct: 66  EGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIEL------NVY 119

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +++ LCK+G  D  K    +M+   I  ++VTYN+LI  +C      EA  +   M
Sbjct: 120 TLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSM 179

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G++P++ ++N I+N LCK G+   A  +L  M+ IG+ P+   YNTL+   C     
Sbjct: 180 ADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNF 239

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+E+F  M   G   ++ S+S LI  + +N+ ++ AL  + +M   G+ PD VIY  L
Sbjct: 240 SEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVL 299

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      +  A K+ DEM   G   D  AY T ++GLCK   + +A +LF  +     
Sbjct: 300 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +  LI G C+ G +  A  LF ++ +  +  D+V YN +I   C  G+M+KA +
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419

Query: 362 LFLDMEAK 369
           L+  M ++
Sbjct: 420 LWDGMISR 427



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 182/358 (50%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++   G  P++ ++++LI    R  H   AL  F +M     +FG+V  P+ V
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK----KFGLV--PDNV 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++ G C+ G + +A ++  +M ++    +V+ YN++++G C      +A  LF EM
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P+  +F  +++  C++G M +A  L   M Q  ++P+   YNTL+DGFC  G +
Sbjct: 355 VERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEM 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A EL+  M S     N  +Y ILIN YC    +  A  L+  M+ KGIKP +V  NT+
Sbjct: 415 EKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G        +A +    M   GVA D  +Y T I+G  +   + +A      +     
Sbjct: 475 IKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGL 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             DI  YN +++G C+ GR++ A  + R +    +  D  TY  +I+       +++A
Sbjct: 535 LPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEA 592



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 159/350 (45%), Gaps = 37/350 (10%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE-A 114
           C  N + +  +I    +   + +  E F  ++ +    ++   NSL+ G     DW E A
Sbjct: 44  CGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKI-DWVELA 102

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             +  E++  G++ NV + N+++N LCK+GK D+    L  M   G+  +   YNTL+  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +C  G +  A E+  SM   G K ++F+Y+ +ING CK      A  +  EML+ G+ PD
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----------------- 277
              YNTL +          A ++F EM R GV  D  ++ + I                 
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 278 ------------------DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
                              G C+NG ++EA+++   +      LD+ AYN +++GLCK  
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  A +LF  +     + D  T+  +IH  C DG M KA  LF  M  +
Sbjct: 343 MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 392



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 129/279 (46%), Gaps = 3/279 (1%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N   N + ++ LI  +  A    E    F  +  +G   ++ + N ++  L K   ++ A
Sbjct: 43  NCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELA 102

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             +   +++ G+  N +  N +++  C  G+ +  +     ME  G   ++ +Y+ LI  
Sbjct: 103 WEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGA 162

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YC+   +E A  + + M  KG+KP +  YN +  GL +  +  RA  +  EM   G++ D
Sbjct: 163 YCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPD 222

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
           T  Y T +   C+     EA E+F  +       D+ +++ LI    ++  L  A   FR
Sbjct: 223 TTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKA---RDLFLD 365
            + +  L+ D V Y +++H  C +G M +A   RD  L+
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLE 321



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 123/285 (43%), Gaps = 18/285 (6%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN----------------- 143
           ++H F  +   ++A+ L + M+ +     V     +++ +C N                 
Sbjct: 1   MVHVFVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQ 60

Query: 144 -GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
             K+ E +    ++   G   +    N+L+ G      V  A E+   +   G + NV++
Sbjct: 61  ARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYT 120

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
            +I++N  CK+ + +   S  SEM   GI  D+V YNTL         +E AF++ + M 
Sbjct: 121 LNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMA 180

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G+    + Y   I+GLCK G    A  +   +  +    D   YN L+   C+     
Sbjct: 181 DKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFS 240

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A E+F  + R  ++ D+V+++ +I     +  +D+A   F DM+
Sbjct: 241 EAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 191/354 (53%), Gaps = 9/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+++T+NT+I+GLCR G    A ++ +++      +G+   P+  TY ++IDG CK+G 
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIK----AWGLA--PSVATYNSLIDGYCKKGG 241

Query: 76  VD---KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
                    L  +M +  I+P  VT+  LI+G+C  ++   A  +F EM  QG+  +VV+
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++ LC  GK++E  +L+E M  +G+ PN   +  ++ GFC  G +  A +    M 
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               + +V  Y+ILI+GY +  ++E A+++   M  KGI P+V  YN L  G        
Sbjct: 362 ERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWR 421

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L DEM+  G+ AD   Y   I  LC  G + +AV+L   +  +  E +   YN +I
Sbjct: 422 SASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G C  G +K A+E+   + +    A+VVTYN+ I   C  GKMD+A DL  +M
Sbjct: 482 QGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN---LFEEMANGNGEFGVVCKP 58
           +A  +   ++ +G  P+V TYN+LI+G C+ G      +   L +EM     E G+   P
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SP 262

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
             VT+  +I+G CK      A  +F +MK + I  +VVTYNSLI G C      E   L 
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM D G+ PN ++F  ++   CK G M +A+  ++ M +  V P+  +Y  L+DG+   
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRL 382

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++  A  +  +M   G   NV +Y+ LI G+ ++ +   A  L  EM  KGI+ DVV Y
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L   L    +V +A KL DEM   G+  +   Y T I G C  G I  A E+   +  
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +   ++  YN  I   C+ G++  A +L   +    L+ + +TY  +   +   G
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 149/313 (47%), Gaps = 38/313 (12%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  + N+L+ G   A   + A+  F   + + V P++ +FN +++ LC+ G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAEELFVSMESMGCKHNVFSYSILING 209
            + +   G+ P+   YN+L+DG+C  G        + L   M   G      ++ +LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YCKN     A+ ++ EM  +GI   VV YN+L  GL    +VE   KL +EM+  G++ +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 270 TWAYRTFIDGLCKNGYIVEA----------------------VELFRTLRILKYELDIR- 306
              +   + G CK G + +A                      ++ +R L  ++  + ++ 
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 307 ------------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
                        YNCLI G  +SG  + A  L   +    + ADVVTYN++I ALC  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 355 KMDKARDLFLDME 367
           ++ KA  L  +M 
Sbjct: 454 EVRKAVKLLDEMS 466



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 144/284 (50%), Gaps = 8/284 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F +++  G   +V TYN+LI+GLC  G     + L EEM     + G+   PN +T
Sbjct: 283 AVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME----DLGL--SPNEIT 336

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++ G CK+G +  A +    M + N+ P+VV Y  LI G+       +A  +   M 
Sbjct: 337 FGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMA 396

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PNV ++N ++    ++G    AS LL+ M + G+  +   YN L+   C  G V 
Sbjct: 397 KKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVR 456

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A +L   M  +G + N  +Y+ +I G+C    I+ A  + + M     + +VV YN +F
Sbjct: 457 KAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN-VF 515

Query: 243 IGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           I  F +I +++ A  L +EM    +  +   Y T  +G+ + GY
Sbjct: 516 IKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 9/239 (3%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           +P+  S N ++  L    ++D A +     ++  V P+ + +NT++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPDVVIYNT 240
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI P  V +  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +      A ++F+EM++ G+AA    Y + I GLC  G + E V+L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +   + C++ G CK G +  A +    +    +  DVV Y I+I      GKM+ A
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDA 388



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 38/174 (21%)

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P     N L  GL    +V+ A K F    R  V+ D + + T I GLC+ G + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSG-------------------------------- 319
           + + ++       +  YN LIDG CK G                                
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 320 ------RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                     A  +F  + +  + A VVTYN +I  LC++GK+++   L  +ME
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 22/129 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G EPN  TYNT+I G C  G+   A  +   M           + N V
Sbjct: 457 KAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK------RANVV 510

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY   I   C+ G +D+A +L  +M D+ + PN +TY ++  G                M
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------M 554

Query: 122 MDQGVQPNV 130
           M++G  P++
Sbjct: 555 MEKGYTPDI 563


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 195/369 (52%), Gaps = 11/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++ + G  PN FTY  L++GLCR G    A  L  ++ N          PN V
Sbjct: 305 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----------PNVV 354

Query: 62  TYTTIIDGLCKEGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            + T+I+G    G +D+AK +  + M      P++ TYN+LI G C       A+ L  E
Sbjct: 355 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 414

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G +PNV+++ ++++  CK G+++EA  +L+ M   G+  NA  YN L+   C   +
Sbjct: 415 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 474

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  +F  M S GCK ++F+++ LI G CK  + E AL LY +ML +G+  + + YNT
Sbjct: 475 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 534

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L         ++ A KL ++M   G   D   Y   I  LC+ G I + + LF  +    
Sbjct: 535 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 594

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +  + N LI+GLC++G ++ A E  R +    L  D+VTYN +I+ LC  G+  +A 
Sbjct: 595 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 654

Query: 361 DLFLDMEAK 369
           +LF  ++ +
Sbjct: 655 NLFDKLQVE 663



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 186/354 (52%), Gaps = 11/354 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V T+N  I+GLC+      A  L + M            PN+ TY  ++ GLC+ 
Sbjct: 282 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG------FTPNSFTYGVLMHGLCRM 335

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE-MMDQGVQPNVVS 132
           G VD+A+ L  K+     NPNVV +N+LI+G+      +EAK +  E M+  G  P++ +
Sbjct: 336 GKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 391

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++  LCK G +  A  L+  M   G  PN   Y  L+D FC  GR+  A  +   M 
Sbjct: 392 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 451

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   N   Y+ LI+  CK+++++ AL+++ +M SKG KPD+  +N+L  GL ++++ E
Sbjct: 452 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 511

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L+ +M   GV A+T  Y T I    + G + EA++L   +      LD   YN LI
Sbjct: 512 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 571

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             LC++G ++    LF  +    L  + ++ NI+I+ LC  G +  A +   DM
Sbjct: 572 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 625



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++FTYNTLI GLC+ G+ + A  L  EM          C+PN +TYT +ID  CKE
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKE 437

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A+ +  +M  + +  N V YN LI   C      +A  +F +M  +G +P++ +F
Sbjct: 438 GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 497

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LCK  K +EA  L + M+  GV  N   YNTL+  F   G +  A +L   M  
Sbjct: 498 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 557

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ LI   C+   IE  L+L+ +M+SKG+ P+ +  N L  GL     ++ 
Sbjct: 558 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 617

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +   +M   G+  D   Y + I+GLCK G   EA+ LF  L++     D   YN LI 
Sbjct: 618 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 677

Query: 314 GLCKSGRLKIAWELFRSLPRGV---LIADVVTYNIMIHALCADGKMD 357
             CK G    A  L   L RGV    I + VT+ I++     +G  +
Sbjct: 678 WHCKEGMFDDAHLL---LSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 198/396 (50%), Gaps = 35/396 (8%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV 55
           +A  L + +R V+ CEP   +YN +++ L       V  N+F EM +         FGVV
Sbjct: 164 QATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVV 223

Query: 56  ------------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                                   C PN + Y T+I  L K G V++  +L  +M     
Sbjct: 224 MKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGC 283

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+V T+N  IHG C     +EA  L   M+ +G  PN  ++ V+M+ LC+ GK+DEA  
Sbjct: 284 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 343

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE-LFVSMESMGCKHNVFSYSILINGY 210
           LL  +      PN  ++NTL++G+   GR++ A+  +  SM S+GC  ++F+Y+ LI G 
Sbjct: 344 LLNKV----PNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 399

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +  A  L +EM  KG +P+V+ Y  L     +  ++E A  + DEM   G+A + 
Sbjct: 400 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 459

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I  LCK+  + +A+ +F  +     + DI  +N LI GLCK  + + A  L++ 
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +IA+ +TYN +IHA    G M +A  L  DM
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 555



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 6/289 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  L  ++++ GCEPNV TY  LI+  C+ G    A N+ +EM+      G     N 
Sbjct: 406 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS------GKGLALNA 459

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +I  LCK+  V  A  +F  M  +   P++ T+NSLI G C  N + EA  L+ +
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 519

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV  N +++N +++   + G M EA +L+  M+  G   +   YN L+   C  G 
Sbjct: 520 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 579

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +   LF  M S G   N  S +ILING C+   I+ AL    +M+ +G+ PD+V YN+
Sbjct: 580 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 639

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           L  GL +  + + A  LFD++Q  G+  D   Y T I   CK G   +A
Sbjct: 640 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 688



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 161/315 (51%), Gaps = 5/315 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P   +Y  ++D L           +F +M  + I+P V T+  ++   C  N+ + A 
Sbjct: 178 CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSAC 237

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M   G  PN + +  +++ L K G+++E  +LLE M+ +G  P+   +N  + G 
Sbjct: 238 ALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 297

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   R++ A +L   M   G   N F+Y +L++G C+  +++ A  L    L+K   P+V
Sbjct: 298 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML----LNKVPNPNV 353

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDE-MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V++NTL  G     +++ A  +  E M   G   D + Y T I GLCK GY+V A EL  
Sbjct: 354 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 413

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++I   E ++  Y  LID  CK GRL+ A  +   +    L  + V YN +I ALC D 
Sbjct: 414 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 473

Query: 355 KMDKARDLFLDMEAK 369
           K+  A ++F DM +K
Sbjct: 474 KVQDALNMFGDMSSK 488


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/369 (33%), Positives = 195/369 (52%), Gaps = 11/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++ + G  PN FTY  L++GLCR G    A  L  ++ N          PN V
Sbjct: 323 EAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN----------PNVV 372

Query: 62  TYTTIIDGLCKEGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            + T+I+G    G +D+AK +  + M      P++ TYN+LI G C       A+ L  E
Sbjct: 373 LFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNE 432

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G +PNV+++ ++++  CK G+++EA  +L+ M   G+  NA  YN L+   C   +
Sbjct: 433 MQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEK 492

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  +F  M S GCK ++F+++ LI G CK  + E AL LY +ML +G+  + + YNT
Sbjct: 493 VQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNT 552

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L         ++ A KL ++M   G   D   Y   I  LC+ G I + + LF  +    
Sbjct: 553 LIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKG 612

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +  + N LI+GLC++G ++ A E  R +    L  D+VTYN +I+ LC  G+  +A 
Sbjct: 613 LNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEAL 672

Query: 361 DLFLDMEAK 369
           +LF  ++ +
Sbjct: 673 NLFDKLQVE 681



 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/354 (33%), Positives = 186/354 (52%), Gaps = 11/354 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V T+N  I+GLC+      A  L + M            PN+ TY  ++ GLC+ 
Sbjct: 300 GCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRG------FTPNSFTYGVLMHGLCRM 353

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE-MMDQGVQPNVVS 132
           G VD+A+ L  K+     NPNVV +N+LI+G+      +EAK +  E M+  G  P++ +
Sbjct: 354 GKVDEARMLLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFT 409

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++  LCK G +  A  L+  M   G  PN   Y  L+D FC  GR+  A  +   M 
Sbjct: 410 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 469

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   N   Y+ LI+  CK+++++ AL+++ +M SKG KPD+  +N+L  GL ++++ E
Sbjct: 470 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 529

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L+ +M   GV A+T  Y T I    + G + EA++L   +      LD   YN LI
Sbjct: 530 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 589

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             LC++G ++    LF  +    L  + ++ NI+I+ LC  G +  A +   DM
Sbjct: 590 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDM 643



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 182/357 (50%), Gaps = 12/357 (3%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           A +   +   GC P++FTYNTLI GLC+ G+ + A  L  EM          C+PN +TY
Sbjct: 392 AVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG------CEPNVITY 445

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           T +ID  CKEG +++A+ +  +M  + +  N V YN LI   C      +A  +F +M  
Sbjct: 446 TILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSS 505

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G +P++ +FN ++  LCK  K +EA  L + M+  GV  N   YNTL+  F   G +  
Sbjct: 506 KGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQE 565

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A +L   M   GC  +  +Y+ LI   C+   IE  L+L+ +M+SKG+ P+ +  N L  
Sbjct: 566 ALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILIN 625

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GL     ++ A +   +M   G+  D   Y + I+GLCK G   EA+ LF  L++     
Sbjct: 626 GLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICP 685

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV---LIADVVTYNIMIHALCADGKMD 357
           D   YN LI   CK G    A  L   L RGV    I + VT+ I++     +G  +
Sbjct: 686 DAITYNTLISWHCKEGMFDDAHLL---LSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 198/396 (50%), Gaps = 35/396 (8%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVV 55
           +A  L + +R V+ CEP   +YN +++ L       V  N+F EM +         FGVV
Sbjct: 182 QATRLLLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVV 241

Query: 56  ------------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                                   C PN + Y T+I  L K G V++  +L  +M     
Sbjct: 242 MKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGC 301

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+V T+N  IHG C     +EA  L   M+ +G  PN  ++ V+M+ LC+ GK+DEA  
Sbjct: 302 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 361

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE-LFVSMESMGCKHNVFSYSILINGY 210
           LL  +      PN  ++NTL++G+   GR++ A+  +  SM S+GC  ++F+Y+ LI G 
Sbjct: 362 LLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 417

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +  A  L +EM  KG +P+V+ Y  L     +  ++E A  + DEM   G+A + 
Sbjct: 418 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 477

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I  LCK+  + +A+ +F  +     + DI  +N LI GLCK  + + A  L++ 
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +IA+ +TYN +IHA    G M +A  L  DM
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 573



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 100/289 (34%), Positives = 152/289 (52%), Gaps = 6/289 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  L  ++++ GCEPNV TY  LI+  C+ G    A N+ +EM+ G G        N 
Sbjct: 424 VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS-GKG-----LALNA 477

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +I  LCK+  V  A  +F  M  +   P++ T+NSLI G C  N + EA  L+ +
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 537

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV  N +++N +++   + G M EA +L+  M+  G   +   YN L+   C  G 
Sbjct: 538 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 597

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +   LF  M S G   N  S +ILING C+   I+ AL    +M+ +G+ PD+V YN+
Sbjct: 598 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 657

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           L  GL +  + + A  LFD++Q  G+  D   Y T I   CK G   +A
Sbjct: 658 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 706



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 161/315 (51%), Gaps = 5/315 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P   +Y  ++D L           +F +M  + I+P V T+  ++   C  N+ + A 
Sbjct: 196 CEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSAC 255

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M   G  PN + +  +++ L K G+++E  +LLE M+ +G  P+   +N  + G 
Sbjct: 256 ALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGL 315

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   R++ A +L   M   G   N F+Y +L++G C+  +++ A  L    L+K   P+V
Sbjct: 316 CKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARML----LNKVPNPNV 371

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDE-MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V++NTL  G     +++ A  +  E M   G   D + Y T I GLCK GY+V A EL  
Sbjct: 372 VLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMN 431

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++I   E ++  Y  LID  CK GRL+ A  +   +    L  + V YN +I ALC D 
Sbjct: 432 EMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDE 491

Query: 355 KMDKARDLFLDMEAK 369
           K+  A ++F DM +K
Sbjct: 492 KVQDALNMFGDMSSK 506


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 198/358 (55%), Gaps = 11/358 (3%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK--- 72
           +PNVFT+N +IN LC+TG    A ++ E+M      +G    PN V+Y T+IDG CK   
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMK----VYGY--SPNVVSYNTLIDGYCKLGG 273

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G + KA  +  +M +  ++PN+ T+N LI GF   ++   +  +F EM+DQ V PNV++
Sbjct: 274 NGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVIT 333

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++N LC  GK++EA  + + M+  GV+PN   Y++L++GFC  G +  A ++F S++
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVK 393

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G +     Y++LI+ YCK  +I+   +L  EM  +GI PDV  YN L  GL     +E
Sbjct: 394 GQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A KLFD++   G+  D   +   ++G C  G   +A  L + +  +  +     YN ++
Sbjct: 454 AAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512

Query: 313 DGLCKSGRLKIAWELFRSLPR-GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G CK G LK A  +   + +   L  +V +YN+++      GK++ A  L  +M  K
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 188/357 (52%), Gaps = 11/357 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCR---TGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A  +   ++V+G  PNV +YNTLI+G C+    G    A  + +EM            P
Sbjct: 241 KARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENE------VSP 294

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  T+  +IDG  K+  +  + ++F +M D+++ PNV+TYNSLI+G C     NEA  + 
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMR 354

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  GVQPN+++++ ++N  CKNG M EA  + + +   G RP   +YN L+D +C  
Sbjct: 355 DKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKL 414

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+++    L   ME  G   +V +Y+ LI G C+N  IE A  L+ ++ +KG+ PD+V +
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTF 473

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-R 297
           + L  G     +  +A  L  EM + G+      Y   + G CK G +  A  +   + +
Sbjct: 474 HILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEK 533

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             +  +++ +YN L+ G  + G+L+ A  L   +    L+ + +TY I+   +   G
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 153/264 (57%), Gaps = 3/264 (1%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N   + + L+ EM+ + +QPNV +FNV++N LCK GKM++A  ++E M   G  PN   Y
Sbjct: 202 NRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSY 261

Query: 169 NTLMDGFCL---TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           NTL+DG+C     G++ +A+ +   M       N+ +++ILI+G+ K+  + G+L ++ E
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKE 321

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML + + P+V+ YN+L  GL    ++  A  + D+M   GV  +   Y + I+G CKNG 
Sbjct: 322 MLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA+++F +++        R YN LID  CK G++   + L   + R  ++ DV TYN 
Sbjct: 382 MKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           +I  LC +G ++ A+ LF  +  K
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTNK 465



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 163/315 (51%), Gaps = 11/315 (3%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           CKP       ++  L K+      + L+ +M    I PNV T+N +I+  C     N+A+
Sbjct: 191 CKP-------LMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCK---NGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
            +  +M   G  PNVVS+N +++  CK   NGKM +A  +L+ M++  V PN   +N L+
Sbjct: 244 DVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILI 303

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           DGF     +  + ++F  M       NV +Y+ LING C   +I  A+ +  +M+S G++
Sbjct: 304 DGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQ 363

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P+++ Y++L  G  +   ++ A  +FD ++  G    T  Y   ID  CK G I +   L
Sbjct: 364 PNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFAL 423

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
              +       D+  YNCLI GLC++G ++ A +LF  L    L  D+VT++I++   C+
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCS 482

Query: 353 DGKMDKARDLFLDME 367
            G+  KA  L  +M 
Sbjct: 483 RGESRKAAMLLKEMS 497



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 147/273 (53%), Gaps = 8/273 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV TYN+LINGLC  G    A+ + ++M +     GV  +PN +TY ++I+G CK G +
Sbjct: 329 PNVITYNSLINGLCNGGKINEAIGMRDKMVSA----GV--QPNLITYHSLINGFCKNGMM 382

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A ++F  +K +   P    YN LI  +C     ++   L  EM  +G+ P+V ++N +
Sbjct: 383 KEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC+NG ++ A +L + +   G+ P+   ++ LM+G+C  G   +A  L   M  MG 
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGL 501

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           K    +Y+I++ GYCK   ++ A ++ ++M   + ++ +V  YN L  G  +  ++E A 
Sbjct: 502 KPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDAN 561

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            L +EM   G+  +   Y    + +   G++ +
Sbjct: 562 MLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/359 (35%), Positives = 185/359 (51%), Gaps = 7/359 (1%)

Query: 8    MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
            M+ R  GC PN  TYN +I GL R G    A  L E M        +  K ++ TY  +I
Sbjct: 1145 METRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-------LSKKASSFTYNPLI 1197

Query: 68   DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
             GL   G V K  +L L+M++E I P VVTYN++IHG   +     A+  F EM   G+ 
Sbjct: 1198 TGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLL 1257

Query: 128  PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
            P+V+++N ++N  CK G + EA  L   + + G+ P    YN L+DG+C  G +  A  L
Sbjct: 1258 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARIL 1317

Query: 188  FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
               M   GC  NV +Y+IL+ G    + +  A   + EMLSKG++PD   YNT       
Sbjct: 1318 KEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI 1377

Query: 248  IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
            +  + RAF+L + +   G+++DT  Y   I GLCK G + +A EL   +     + D   
Sbjct: 1378 LGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCIT 1437

Query: 308  YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y CLI   C+ G L+ A ++F ++    L+   VT+ ++IHA C  G +  A   F  M
Sbjct: 1438 YTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKM 1496



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 174/354 (49%), Gaps = 6/354 (1%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  P V TYN +I+GL ++G    A   F EM       G++  P+ +TY ++++G CK 
Sbjct: 1220 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR----AMGLL--PDVITYNSLLNGYCKA 1273

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            G + +A  LF  ++   + P V+TYN LI G+C   D  EA+ L  EM +QG  PNV ++
Sbjct: 1274 GNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 1333

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++M        +  A    + M+  G++P+ F YNT +    + G + RA EL   +  
Sbjct: 1334 TILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLML 1393

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             G   +  +Y+ILI+G CK   ++ A  L  +M+S G++PD + Y  L     E   +  
Sbjct: 1394 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 1453

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
            A K+F+ M   G+      +   I   C+ G +  A   FR +     E +   YN LI 
Sbjct: 1454 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 1513

Query: 314  GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             LC+ GR ++A   F  +    L+A+  TY ++I   C  G  + A   + +M 
Sbjct: 1514 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 1567



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 182/398 (45%), Gaps = 42/398 (10%)

Query: 5    ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            + F ++   G  P+V   N ++  L           + EEM     E G+  +P+ VTY 
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEML----ELGI--EPSIVTYN 1123

Query: 65   TIIDGLCKEGFVDKAKELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLF---- 118
            T++D   KEG  DK   L  +M+       PN VTYN +I G     D  EA  L     
Sbjct: 1124 TLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR 1183

Query: 119  ------------------------------IEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
                                          +EM ++G+ P VV++N +++ L ++G ++ 
Sbjct: 1184 LSKKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEA 1243

Query: 149  ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
            A      M  +G+ P+   YN+L++G+C  G +  A  LF  +   G    V +Y+ILI+
Sbjct: 1244 AQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID 1303

Query: 209  GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            GYC+  ++E A  L  EM  +G  P+V  Y  L  G   +  +  A + FDEM   G+  
Sbjct: 1304 GYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQP 1363

Query: 269  DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
            D +AY T I      G I  A EL   L +     D   YN LI GLCK+G LK A EL 
Sbjct: 1364 DCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQ 1423

Query: 329  RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              +    L  D +TY  +IHA C  G + +AR +F +M
Sbjct: 1424 MKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 1461



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 154/314 (49%), Gaps = 6/314 (1%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  LF  LR  G  P V TYN LI+G CR G    A  L EEM    GE G  C PN  
Sbjct: 1278 EALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM----GEQG--CLPNVC 1331

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TYT ++ G      +  A+E F +M  + + P+   YN+ I       D   A  L   +
Sbjct: 1332 TYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVL 1391

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            M +G+  + V++N++++ LCK G + +A  L   M+  G++P+   Y  L+   C  G +
Sbjct: 1392 MLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLL 1451

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              A ++F +M S G   +  +++++I+ YC+   +  A   + +ML +G++P+ + YN L
Sbjct: 1452 REARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 1511

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               L  + + + A   F EM   G+ A+ + Y   IDG CK G   +A+  +  +     
Sbjct: 1512 IHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 1571

Query: 302  ELDIRAYNCLIDGL 315
              D   +  L+ G 
Sbjct: 1572 HPDYLTHKALLKGF 1585



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 142/289 (49%), Gaps = 3/289 (1%)

Query: 83   FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
            F +M    + P+V   N ++     A  W++   +  EM++ G++P++V++N +++   K
Sbjct: 1072 FREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLK 1131

Query: 143  NGKMDEASRLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
             G+ D+ + LL+ M     G  PN   YN ++ G    G +  A EL   M  +  K + 
Sbjct: 1132 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASS 1190

Query: 201  FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            F+Y+ LI G      ++    L  EM ++GI P VV YN +  GL +   VE A   F E
Sbjct: 1191 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 1250

Query: 261  MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
            M+  G+  D   Y + ++G CK G + EA+ LF  LR       +  YN LIDG C+ G 
Sbjct: 1251 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGD 1310

Query: 321  LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L+ A  L   +     + +V TY I++        +  AR+ F +M +K
Sbjct: 1311 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK 1359



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 74/186 (39%), Gaps = 38/186 (20%)

Query: 220  LSLYSEMLSKGIKPDV-----------------------------------VIYNTLFIG 244
            LS + EM S G+ PDV                                   V YNTL   
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 245  LFEIHQVERAFKLFDEMQRHGVA--ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
              +  + ++   L  EM+  G     +   Y   I GL + G + EA EL   +R+ K  
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 1188

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                 YN LI GL   G +K  ++L   +    ++  VVTYN MIH L   G ++ A+  
Sbjct: 1189 SSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 1247

Query: 363  FLDMEA 368
            F +M A
Sbjct: 1248 FAEMRA 1253


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 190/351 (54%), Gaps = 5/351 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  +YNT++  LCR G    AL L   M++   E  +  +PN ++YTT++  LC +    
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSH---EPRLASRPNAISYTTLMRALCADRRAA 111

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  L   M+D  + P+VVTY +LI G C A D + A  L  EM + G++PNVV ++ ++
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK G+ +   ++ E M   G+ P+  +Y  L+D  C  G+V +A  +   M   G +
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +Y++LIN  CK   +  AL L   M  KG++PDVV YNTL  GL  + +++ A  L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291

Query: 258 FDEMQR--HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +EM +    V  D   + + I GLCK G++ +A+++   +       ++ A+N LI GL
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +  ++K A EL   +    L  D  TY+I+I+  C   ++++A     +M
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEM 402



 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/398 (32%), Positives = 195/398 (48%), Gaps = 32/398 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  L   ++  G  P+V TY TLI GLC       A+ L  EM     E  VV      
Sbjct: 112 QAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLL 171

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                    P+ V YT +ID LC+ G V KA  +   M +  + 
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTYN LI+  C      EA  L   M ++GVQP+VV++N ++  L    +MDEA  L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291

Query: 153 LELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           LE M+Q    VRP+   +N+++ G C  G + +A ++   M   GC+ N+ ++++LI G 
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  +++ A+ L  EM S G++PD   Y+ L  G  ++ QVERA     EM+  G+  + 
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEP 411

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   +  +C  G + +A +LF  +     +LD  AY+ +I G  KSG  KIA E  + 
Sbjct: 412 VHYIPLLKAMCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKD 470

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +    LI D VTY+I I+     G +  A  +   M A
Sbjct: 471 MIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTA 508



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 200/372 (53%), Gaps = 15/372 (4%)

Query: 4   AALFMKLRVFGCEP------NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           AALF+ LRV   EP      N  +Y TL+  LC       A+ L   M +     GV  +
Sbjct: 74  AALFL-LRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQD----CGV--R 126

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ VTY T+I GLC    VD A EL  +M +  I PNVV Y+ L+HG+C    W     +
Sbjct: 127 PDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKV 186

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM  +G++P+VV +  +++ LC++GK+ +A+R++++M + G+ PN   YN L++  C 
Sbjct: 187 FEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCK 246

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--KGIKPDV 235
            G V  A +L  +M   G + +V +Y+ LI G     E++ A++L  EM+     ++PD+
Sbjct: 247 EGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDL 306

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + +N++  GL +I  + +A ++   M  +G   +  A+   I GL +   + +A+EL   
Sbjct: 307 MTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDE 366

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +     + D   Y+ LI+G CK  +++ A      +    +  + V Y  ++ A+C  G 
Sbjct: 367 MASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGM 426

Query: 356 MDKARDLFLDME 367
           M +ARDLF +M+
Sbjct: 427 MGQARDLFNEMD 438



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 196/367 (53%), Gaps = 11/367 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F ++   G EP+V  Y  LI+ LCR G    A  + + M     E G+  +PN VTY  
Sbjct: 186 VFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMT----ERGL--EPNVVTYNV 239

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+ +CKEG V +A +L   M ++ + P+VVTYN+LI G     + +EA  L  EMM QG
Sbjct: 240 LINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM-QG 298

Query: 126 ---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V+P++++FN +++ LCK G M +A ++  +M + G R N   +N L+ G     +V 
Sbjct: 299 ETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVK 358

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A EL   M S G + + F+YSILING+CK +++E A S  SEM  +G++P+ V Y  L 
Sbjct: 359 KAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLL 418

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             + +   + +A  LF+EM R+    D  AY T I G  K+G    A E  + +      
Sbjct: 419 KAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLI 477

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y+  I+   KSG L  A  + + +     + DV  ++ +I    A G  +K  +L
Sbjct: 478 PDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILEL 537

Query: 363 FLDMEAK 369
             +M AK
Sbjct: 538 TREMTAK 544



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 143/330 (43%), Gaps = 43/330 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G +P+V TYNTLI GL        A+ L EEM  G        +P+ +
Sbjct: 252 EALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRV----RPDLM 307

Query: 62  TYTTIIDGLCKEGF-----------------------------------VDKAKELFLKM 86
           T+ ++I GLCK G+                                   V KA EL  +M
Sbjct: 308 TFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEM 367

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
               + P+  TY+ LI+GFC       A+    EM  QG++P  V +  ++  +C  G M
Sbjct: 368 ASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMM 427

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +A  L   M +   + +A  Y+T++ G   +G    AEE    M   G   +  +YSI 
Sbjct: 428 GQARDLFNEMDR-NCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIP 486

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN + K+ ++  A  +  +M + G  PDV ++++L  G       E+  +L  EM    V
Sbjct: 487 INMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDV 546

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           A D     T +  L   G  +E  +L ++L
Sbjct: 547 ALDPKIISTIVTSL---GASIEGQKLLQSL 573



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 3/209 (1%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSME---SMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +A  YNT++   C  G ++ A  L   M     +  + N  SY+ L+   C ++    A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L   M   G++PDVV Y TL  GL +   V+ A +L +EM   G+  +   Y   + G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G      ++F  +     E D+  Y  LID LC+ G++K A  +   +    L  +V
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VTYN++I+++C +G + +A DL  +M  K
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEK 263


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/397 (31%), Positives = 200/397 (50%), Gaps = 32/397 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF--------- 52
           EAA +F  +   G  PN+ TY  L++G    G     ++ F  M  G+G           
Sbjct: 239 EAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTM-KGDGIVANCLVFTIL 297

Query: 53  ---------------------GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                                G    P+  TY+T+I  LC+ G +  A + F +M    +
Sbjct: 298 IDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGV 357

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV-QPNVVSFNVIMNELCKNGKMDEAS 150
            PN V Y+SLI GFC   D  +AK L  EMM+ G+ +PN+  FN I++ +CK G++ +A 
Sbjct: 358 QPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAH 417

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            + +L+  IG R +  ++NTL+DG+CL G + +A  +  +M S G   + F+Y+ L+NGY
Sbjct: 418 HIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGY 477

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K+  I+  L+L+ EM  K IKP  V YN +  GLF   +   A K+  EM   G     
Sbjct: 478 FKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSL 537

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   + GLC+N    EA+ +F+ L  +  + +I   N +I+ +    R + A +LF +
Sbjct: 538 PTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKDLFSA 597

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +    L+ +  TY IMI  L  +G +++A ++F  ME
Sbjct: 598 ISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSME 634



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 185/346 (53%), Gaps = 7/346 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TYNT+I+G  + G    A NL+ EM     + G V  P+ VT+ +II+ LCK  
Sbjct: 112 CSPDVVTYNTVIHGFFKEGKIGKACNLYHEMM----QQGFV--PDVVTHNSIINALCKAR 165

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD A+ L  +M D  + PN VTY S+IHG+     W EA  +F EM  +G+ P++VS+N
Sbjct: 166 AVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWN 225

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
             M+ LCK+G+  EA+ +   M   G RPN   Y  L+ G+   G        F +M+  
Sbjct: 226 SFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGD 285

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   N   ++ILI+ Y K   ++ A+ + SEM  +G+ PDV  Y+TL   L  + ++  A
Sbjct: 286 GIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADA 345

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL-FRTLRILKYELDIRAYNCLID 313
              F++M   GV  +T  Y + I G C +G +V+A EL +  +       +I  +N ++ 
Sbjct: 346 VDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVH 405

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +CK GR+  A  +F  +      +D++ +N +I   C  G+M KA
Sbjct: 406 SICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKA 451



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 188/359 (52%), Gaps = 5/359 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   GC P+ F+Y  ++  LC    +  AL+L   MA   G    VC P+ VTY T
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEG----VCSPDVVTYNT 121

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G  KEG + KA  L+ +M  +   P+VVT+NS+I+  C A   + A+ L  +M+D G
Sbjct: 122 VIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNG 181

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN V++  +++     G+ +EA+++   M   G+ P+   +N+ MD  C  GR   A 
Sbjct: 182 VPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAA 241

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F SM + G + N+ +Y IL++GY         +S ++ M   GI  + +++  L    
Sbjct: 242 EIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAY 301

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A  +  EMQ  G++ D + Y T I  LC+ G + +AV+ F  +     + + 
Sbjct: 302 AKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNT 361

Query: 306 RAYNCLIDGLCKSGRLKIAWEL-FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y+ LI G C  G L  A EL +  +  G+   ++  +N ++H++C +G++  A  +F
Sbjct: 362 VVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 202/433 (46%), Gaps = 77/433 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++   G  P+V T+N++IN LC+      A  L  +M + NG       PN V
Sbjct: 134 KACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVD-NG-----VPPNKV 187

Query: 62  TYTTII-----------------------------------DGLCKEGFVDKAKELFLKM 86
           TYT++I                                   D LCK G   +A E+F  M
Sbjct: 188 TYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSM 247

Query: 87  KDENINPNVVTYNSLIHGF----CYAN-------------------------------DW 111
             +   PN+VTY  L+HG+    C+A+                                 
Sbjct: 248 AAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMM 307

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           +EA  +  EM  QG+ P+V +++ +++ LC+ G++ +A      MI  GV+PN  VY++L
Sbjct: 308 DEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSL 367

Query: 172 MDGFCLTGRVNRAEELFVSMESMGC-KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           + GFC  G + +A+EL   M + G  + N+  ++ +++  CK   +  A  ++  +   G
Sbjct: 368 IQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIG 427

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            + D++++NTL  G   + ++ +AF + D M   G+  DT+ Y T ++G  K+G I + +
Sbjct: 428 ERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGL 487

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            LFR +   K +     YN ++DGL ++GR   A ++   +        + TYNI++  L
Sbjct: 488 NLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGL 547

Query: 351 CADGKMDKARDLF 363
           C +   D+A  +F
Sbjct: 548 CRNNCTDEAIVMF 560



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 155/318 (48%), Gaps = 3/318 (0%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           V  P   TY  +++G C+    +     F ++    +  +    N+++   C     ++A
Sbjct: 3   VAPPTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDA 62

Query: 115 -KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI-QIGV-RPNAFVYNTL 171
            K L   M + G  P+  S+ +++  LC + +  +A  LL +M  + GV  P+   YNT+
Sbjct: 63  VKVLLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTV 122

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + GF   G++ +A  L+  M   G   +V +++ +IN  CK + ++ A  L  +M+  G+
Sbjct: 123 IHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGV 182

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+ V Y ++  G   + + E A K+F EM   G+  D  ++ +F+D LCK+G   EA E
Sbjct: 183 PPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAE 242

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           +F ++    +  +I  Y  L+ G    G        F ++    ++A+ + + I+I A  
Sbjct: 243 IFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYA 302

Query: 352 ADGKMDKARDLFLDMEAK 369
             G MD+A  +  +M+ +
Sbjct: 303 KRGMMDEAMLILSEMQGQ 320



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 137/274 (50%), Gaps = 6/274 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PN+  +N++++ +C+ G  + A ++F+ +    GE     + + + + T+IDG C  G 
Sbjct: 394 RPNIAFFNSIVHSICKEGRVMDAHHIFD-LVKDIGE-----RSDIIMFNTLIDGYCLVGE 447

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + KA  +   M    I P+  TYN+L++G+  +   ++   LF EM D+ ++P  V++N+
Sbjct: 448 MGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNI 507

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I++ L + G+   A ++L  MI  G   +   YN ++ G C     + A  +F  + +M 
Sbjct: 508 ILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMN 567

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K N+ + + +IN     +  E A  L+S +   G+ P+   Y  +   L +   VE A 
Sbjct: 568 VKFNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEAD 627

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            +F  M++ G A  +      I  L + G IV+A
Sbjct: 628 NMFSSMEKSGCAPCSRLLNDTIRTLLEKGEIVKA 661



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/254 (27%), Positives = 123/254 (48%), Gaps = 6/254 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +F  ++  G   ++  +NTLI+G C  G    A ++ + M +          P+T
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAG------IGPDT 467

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T+++G  K G +D    LF +M D+ I P  VTYN ++ G   A     A+ +  E
Sbjct: 468 FTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHE 527

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G   ++ ++N+I+  LC+N   DEA  + + +  + V+ N    NT+++      R
Sbjct: 528 MIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQR 587

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A++LF ++   G   N  +Y I+I    K   +E A +++S M   G  P   + N 
Sbjct: 588 REEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLND 647

Query: 241 LFIGLFEIHQVERA 254
               L E  ++ +A
Sbjct: 648 TIRTLLEKGEIVKA 661


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 187/349 (53%), Gaps = 6/349 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+   +N L++GLC+      A  + EEM+    E G+V  P+ VTY ++IDGLCK  
Sbjct: 169 CAPDSVLFNILVHGLCKANQLSEARQMIEEMS----ERGIV--PDVVTYNSLIDGLCKSY 222

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +++A++L   M    + PN+VTYN+LI+G+C       A  L   M+  G  P+VV+FN
Sbjct: 223 RMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFN 282

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++  C+  K+D+A  +L LM +    PN   YN L+ G C  GR N A EL   M+  
Sbjct: 283 SLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGR 342

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   ++ +Y+ LI  +C+N +IE A  + + M+ +G+ PD + Y TL + L +  + + A
Sbjct: 343 GILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEA 402

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           F L D M   G   + + + + ++GLC +  + EA  L   +R +  +     Y  L+ G
Sbjct: 403 FALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTG 462

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           LCK+GR+  A E+   +    +   V +   ++H L  +GK D A   F
Sbjct: 463 LCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYF 511



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 200/368 (54%), Gaps = 11/368 (2%)

Query: 1   MEAA-ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ME A  L  +++  G  P+V T+++++  LC TG+   A+  F E         V C P+
Sbjct: 121 MERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRE--------SVECAPD 172

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +V +  ++ GLCK   + +A+++  +M +  I P+VVTYNSLI G C +    EA+ L  
Sbjct: 173 SVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLE 232

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+ + V+PN+V++N ++   CK G    A +L+E MIQ G  P+   +N+L+ GFC   
Sbjct: 233 TMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKS 292

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++++A E+   M+   C  N+ +Y++LI+G C       A  L SEM  +GI PD++ YN
Sbjct: 293 KIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYN 352

Query: 240 TLFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +L IG+F    Q+E+AF++ + M   GV  D  +Y T    L K+    EA  L   +  
Sbjct: 353 SL-IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFD 411

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                ++  +N L++GLC S RL  A  L   + R        TY +++  LC  G++D 
Sbjct: 412 AGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDD 471

Query: 359 ARDLFLDM 366
           A+++ + M
Sbjct: 472 AKEVLVMM 479



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 144/306 (47%), Gaps = 45/306 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +      PN+ TYNTLI G C+TG T +A  L E M            P+ V
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTH------PDVV 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++I G C++  +DKA E+   MK     PN+VTYN LI G C A   NEA  L  EM
Sbjct: 280 TFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKN-----------------------------------GKM 146
             +G+ P+++++N ++   C+N                                    + 
Sbjct: 340 DGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERF 399

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA  LL+ M   G  PN F +N+LM+G C + R++ A  L   M  +GC     +Y +L
Sbjct: 400 DEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVL 459

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + G CK   ++ A  +   M+S+GI+P V    T+   L    + + A   FD++    V
Sbjct: 460 VTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQV----V 515

Query: 267 AADTWA 272
           AA++ A
Sbjct: 516 AAESKA 521



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/284 (29%), Positives = 152/284 (53%), Gaps = 4/284 (1%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI-EMMDQGVQPNVVSFNVIMNELCKNGK 145
           + E+I+ N  T N L+     A   ++A  +F  E++ Q    N +++N ++   CK G 
Sbjct: 62  RGESIHNNF-TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGD 120

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           M+ A +LL  M + G  P+   +++++   C TG ++RA + F   ES+ C  +   ++I
Sbjct: 121 MERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF--RESVECAPDSVLFNI 178

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L++G CK  ++  A  +  EM  +GI PDVV YN+L  GL + +++E A +L + M +  
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V  +   Y T I G CK G    A +L   +       D+  +N LI G C+  ++  A 
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           E+   + +G+   ++VTYN++I  LC  G+ ++A +L  +M+ +
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGR 342


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 190/358 (53%), Gaps = 10/358 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + NV TYN +I G+ + G    A++LF EM     E      P+T TY  +IDG  K 
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLE------PDTWTYNLLIDGYLKS 429

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + KA EL  +MK   + P+  TY+ LI G C+++D  +A  +  +M+  GV+PNV  +
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMY 489

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++    +  + + A  LL++MI  GV P+ F YN L+ G C   +V  A+ L V M  
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 549

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K N  +Y   IN Y K+ EI+ A   + +MLS GI P+ VIY  L  G  ++     
Sbjct: 550 KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE 609

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCL 311
           A   F  M   G+  D  AY   I  L KNG   EA+ +F  L+ LK  +  D+  YN L
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSL 667

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           I G CK G ++ A +L+  +    +  ++V YN +I+ LC  G++ KAR+LF ++E K
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEK 725



 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 198/368 (53%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + +   G +PN  TY   IN   ++G   VA   F++M +     G+V  PN V
Sbjct: 539 EAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSS----GIV--PNNV 592

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +I G C  G   +A   F  M ++ + P++  Y+++IH         EA  +F++ 
Sbjct: 593 IYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV P+V  +N +++  CK G +++AS+L + M+  G+ PN  VYNTL++G C  G V
Sbjct: 653 LKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEV 712

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ELF  +E      +V +YS +I+GYCK+  +  A  L+ EM+SKGI PD  IY  L
Sbjct: 713 TKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCIL 772

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +E+A  LF E Q+  V + + A+ + ID  CK+G ++EA ELF  +   K 
Sbjct: 773 IDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKL 831

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  Y  LID   K+  ++ A +LF  +    +I + +TY  ++ +    G   K   
Sbjct: 832 TPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMIS 891

Query: 362 LFLDMEAK 369
           LF DMEA+
Sbjct: 892 LFKDMEAR 899



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++     P+ FTY+ LI+GLC +     A  + ++M   NG      KPN  
Sbjct: 434 KACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIR-NG-----VKPNVF 487

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I    +E   + A EL   M    + P++  YN LI G C A    EAK L ++M
Sbjct: 488 MYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM 547

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++PN  ++   +N   K+G++  A R  + M+  G+ PN  +Y  L+ G C  G  
Sbjct: 548 GEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNT 607

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A   F  M   G   ++ +YS +I+   KN + + A+ ++ + L  G+ PDV +YN+L
Sbjct: 608 VEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSL 667

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +E+A +L+DEM  +G+  +   Y T I+GLCK G + +A ELF  +     
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDL 727

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  Y+ +IDG CKSG L  A++LF  +    +  D   Y I+I     +G ++KA  
Sbjct: 728 VPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALS 787

Query: 362 LFLDMEAK 369
           LF + + K
Sbjct: 788 LFHEAQQK 795



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 194/362 (53%), Gaps = 7/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F+K    G  P+VF YN+LI+G C+ G    A  L++EM + NG       PN V
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH-NG-----INPNIV 697

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I+GLCK G V KA+ELF +++++++ P+VVTY+++I G+C + +  EA  LF EM
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+   + ++++   K G +++A  L     Q  V   +  +N+L+D FC  G+V
Sbjct: 758 ISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKV 816

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ELF  M       N+ +Y+ILI+ Y K + +E A  L+ +M ++ I P+ + Y +L
Sbjct: 817 IEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSL 876

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            +   +I    +   LF +M+  G+A D  AY       CK G  +EA++L     +   
Sbjct: 877 LLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGI 936

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L+   ++ LI  LCK  ++    EL   + +  L     T N ++      G  D+A  
Sbjct: 937 KLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASK 996

Query: 362 LF 363
           + 
Sbjct: 997 VL 998



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 183/350 (52%), Gaps = 8/350 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           C+PN+FTYN  I GLC+TG    AL + +  M  G G       P+  TYT ++DG CK+
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLG-------PDGHTYTLLVDGFCKQ 324

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               +AK +F  M    +NPN  TY +LI GF    +  EA  +  EM+ +G++ NVV++
Sbjct: 325 KRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTY 384

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  + K G+M +A  L   M+  G+ P+ + YN L+DG+  +  + +A EL   M++
Sbjct: 385 NAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKA 444

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                + F+YS+LI+G C + +++ A  +  +M+  G+KP+V +Y TL     +  + E 
Sbjct: 445 RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEM 504

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L   M  +GV  D + Y   I GLC+   + EA  L   +     + +   Y   I+
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              KSG +++A   F+ +    ++ + V Y I+I   C  G   +A   F
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 186/392 (47%), Gaps = 49/392 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TY  L++G C+   +  A  +FE M +          PN  TYT +IDG  KE
Sbjct: 306 GLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSG------LNPNRFTYTALIDGFIKE 359

Query: 74  GFVDKAKELFLKMKDENINP----NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           G +++A    L++KDE I      NVVTYN++I G   A +  +A  LF EM+  G++P+
Sbjct: 360 GNIEEA----LRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPD 415

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
             ++N++++   K+  M +A  LL  M    + P+ F Y+ L+ G C +  + +A E+  
Sbjct: 416 TWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLD 475

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   G K NVF Y  LI  Y +    E A+ L   M++ G+ PD+  YN L IGL    
Sbjct: 476 QMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAK 535

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFID------------------------------- 278
           +VE A  L  +M   G+  +   Y  FI+                               
Sbjct: 536 KVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYT 595

Query: 279 ----GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
               G C  G  VEA+  F+ +       DIRAY+ +I  L K+G+ K A  +F    + 
Sbjct: 596 ILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKT 655

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            ++ DV  YN +I   C +G ++KA  L+ +M
Sbjct: 656 GVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 175/350 (50%), Gaps = 7/350 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V+TY  +I   C+ G  I    +  EM          CKPN  TY   I GLC+ G V
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFIGGLCQTGAV 292

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A E+   M ++ + P+  TY  L+ GFC      EAK +F  M   G+ PN  ++  +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++   K G ++EA R+ + MI  G++ N   YN ++ G    G + +A  LF  M   G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGL 412

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + + ++Y++LI+GY K+ ++  A  L +EM ++ + P    Y+ L  GL     +++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + D+M R+GV  + + Y T I    +      A+EL + +       D+  YNCLI GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ++ +++ A  L   +    +  +  TY   I+     G++  A   F DM
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM 582



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 161/306 (52%), Gaps = 1/306 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  +    ++  L K   +    +++  M +  I P+V TY ++I   C   D  + K +
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM ++  +PN+ ++N  +  LC+ G +DEA  + +LM++ G+ P+   Y  L+DGFC 
Sbjct: 265 LSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK 323

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R   A+ +F SM S G   N F+Y+ LI+G+ K   IE AL +  EM+++G+K +VV 
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN +  G+ +  ++ +A  LF+EM   G+  DTW Y   IDG  K+  + +A EL   ++
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K       Y+ LI GLC S  L+ A E+   + R  +  +V  Y  +I A   + + +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503

Query: 358 KARDLF 363
            A +L 
Sbjct: 504 MAIELL 509



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 146/325 (44%), Gaps = 18/325 (5%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINP-----------------NVVTYNSLIHG 104
           +Y+ +   LC  G + +A  +  K+      P                 N+  ++  I  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           F      NEA  +FI  + +G  P ++  N +M +L K   M    ++   M++  + P+
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            + Y  ++   C  G V + + +   ME   CK N+F+Y+  I G C+   ++ AL +  
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            M+ KG+ PD   Y  L  G  +  + + A  +F+ M   G+  + + Y   IDG  K G
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            I EA+ +   +     +L++  YN +I G+ K+G +  A  LF  +    L  D  TYN
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYN 420

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
           ++I        M KA +L  +M+A+
Sbjct: 421 LLIDGYLKSHDMAKACELLAEMKAR 445



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 10/179 (5%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  LF+ +      PN  TY +L+    + G+    ++LF++M       G+ C  + +
Sbjct: 853  EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDME----ARGIAC--DAI 906

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             Y  +    CKEG   +A +L  K   E I      +++LI   C     +    L  EM
Sbjct: 907  AYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 966

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              + +  +  + N ++    K+G  DEAS++L +M ++G  P +    +L D    TGR
Sbjct: 967  GKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL---SLTDSIS-TGR 1021


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 184/351 (52%), Gaps = 6/351 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F  EP+V TYNTLI+GLC+ G     L L E M +        C PNTVTY  +IDG CK
Sbjct: 374 FLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPR-----CMPNTVTYNCLIDGYCK 428

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              ++ A+ELF +M  + + PNVVT N+L+ G C     N A   F EM  +G++ N V+
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++   C    +++A  L + M++ G  P+A VY TL+ G    G+++RA  +   M+
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ S+++LING+C+  +++ A  +  EM + GIKPD V YNTL     +     
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFS 608

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCL 311
            A +L  +M + G+      Y   I   C NG + EA+++FR +    K   +   YN L
Sbjct: 609 TAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNIL 668

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           I+ LC+  ++ +A  L   +    +  +  T+N M   L     + KA +L
Sbjct: 669 INSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFEL 719



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/387 (32%), Positives = 189/387 (48%), Gaps = 35/387 (9%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFE---------EMANGNG---------EFGVV--- 55
           PN      LI+ LCR+G T  A ++           E A+ N          EF  +   
Sbjct: 268 PNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTL 327

Query: 56  --------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN-----PNVVTYNSLI 102
                    +PN VT+  +I+ LCK   VD+A E+F KM     N     P+V+TYN+LI
Sbjct: 328 LAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLI 387

Query: 103 HGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
            G C      E   L   M  Q    PN V++N +++  CK   ++ A  L + M + GV
Sbjct: 388 DGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGV 447

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            PN    NTL+DG C  GR+N A E F  M+  G K N  +Y+ LI  +C    IE A+ 
Sbjct: 448 PPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAME 507

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L+ EML  G  PD ++Y TL  GL +  +++RA  +  +M+  G + D  ++   I+G C
Sbjct: 508 LFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFC 567

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           +   + EA E+ + +     + D   YN LI    K+G    A  L + + +  L+  VV
Sbjct: 568 RKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVV 627

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEA 368
           TY  +IHA C +G +D+A  +F DM +
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSS 654



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 190/367 (51%), Gaps = 3/367 (0%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  +++    +PNV T+  LIN LC+      AL +FE+M NG    G + +P+ +TY 
Sbjct: 326 TLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM-NGGESNGFLVEPDVITYN 384

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           T+IDGLCK G  ++   L  +M+ +    PN VTYN LI G+C A+    A+ LF +M  
Sbjct: 385 TLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNK 444

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            GV PNVV+ N +++ +CK+G+++ A      M   G++ NA  Y  L+  FC    + +
Sbjct: 445 DGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEK 504

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A ELF  M   GC  +   Y  LI+G  +  +++ A  + S+M   G  PD+V +N L  
Sbjct: 505 AMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLIN 564

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G    ++++ A+++  EM+  G+  D   Y T I    K G    A  L + +       
Sbjct: 565 GFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVP 624

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI-ADVVTYNIMIHALCADGKMDKARDL 362
            +  Y  LI   C +G L  A ++FR +     +  + V YNI+I++LC   ++D A  L
Sbjct: 625 TVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSL 684

Query: 363 FLDMEAK 369
             DM+ K
Sbjct: 685 MDDMKVK 691



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 154/291 (52%), Gaps = 7/291 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G  PNV T NTL++G+C+ G    A+  F EM  G G      K N VT
Sbjct: 435 ARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM-QGKG-----LKGNAVT 488

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I   C    ++KA ELF +M +   +P+ + Y +LI G   A   + A  +  +M 
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G  P++VSFNV++N  C+  K+DEA  +L+ M   G++P+   YNTL+  F  TG  +
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFS 608

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTL 241
            A  L   M   G    V +Y  LI+ YC N  ++ A+ ++ +M S   + P+ VIYN L
Sbjct: 609 TAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNIL 668

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
              L   +QV+ A  L D+M+  GV  +T  +     GL +  ++ +A EL
Sbjct: 669 INSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFEL 719



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 153/350 (43%), Gaps = 39/350 (11%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N LI+ L R G    AL+L +EM     EF     PN+ T   +   L K   V +A   
Sbjct: 196 NILIDVLFRKGRVDDALHLLDEMLQPKAEF----PPNSNTGHIVFSALSKRDKVGRAV-- 249

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
                                      D  E   L  +  +  V PN +    +++ LC+
Sbjct: 250 ---------------------------DEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCR 282

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
           +G+ D A  +L  ++++G    A   N L+          R   L   M+ M  + NV +
Sbjct: 283 SGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEMDIQPNVVT 342

Query: 203 YSILINGYCKNKEIEGALSLYSEM---LSKG--IKPDVVIYNTLFIGLFEIHQVERAFKL 257
           + ILIN  CK + ++ AL ++ +M    S G  ++PDV+ YNTL  GL ++ + E    L
Sbjct: 343 FGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGL 402

Query: 258 FDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
            + M+       +T  Y   IDG CK   I  A ELF  +       ++   N L+DG+C
Sbjct: 403 VERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMC 462

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K GR+  A E F  +    L  + VTY  +I A C    ++KA +LF +M
Sbjct: 463 KHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM 512



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 7/241 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   GC P+   Y TLI+GL + G    A  +  +M     E G    P+ V
Sbjct: 504 KAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK----EAGF--SPDIV 557

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++  +I+G C++  +D+A E+  +M++  I P+ VTYN+LI  F    D++ A  L  +M
Sbjct: 558 SFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKM 617

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
           + +G+ P VV++  +++  C NG +DEA ++   M     V PN  +YN L++  C   +
Sbjct: 618 VKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQ 677

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  L   M+  G K N  +++ +  G  +   +  A  L   M      PD +    
Sbjct: 678 VDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEI 737

Query: 241 L 241
           L
Sbjct: 738 L 738



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/272 (27%), Positives = 135/272 (49%), Gaps = 14/272 (5%)

Query: 112 NEAKCLFIEMMDQGVQ--PNVVSFNVIMNELCKNGKM------DEASRLLELMIQIGVRP 163
           ++A  L  EM+    +  PN  + +++ + L K  K+      +E   L+    +  V P
Sbjct: 209 DDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFP 268

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N+     L+   C +GR +RA ++   +  +G      S + L+    + +E +   +L 
Sbjct: 269 NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLL 328

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM---QRHG--VAADTWAYRTFID 278
           +EM    I+P+VV +  L   L +  +V+ A ++F++M   + +G  V  D   Y T ID
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388

Query: 279 GLCKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           GLCK G   E + L   +R     + +   YNCLIDG CK+  ++ A ELF  + +  + 
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +VVT N ++  +C  G+++ A + F +M+ K
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQGK 480



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 7/183 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G +P+  TYNTLI+   +TG    A  L ++M     + G+V  P  V
Sbjct: 574 EAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV----KEGLV--PTVV 627

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY  +I   C  G +D+A ++F  M   + + PN V YN LI+  C  N  + A  L  +
Sbjct: 628 TYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDD 687

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +GV+PN  +FN +   L +   + +A  L++ M +    P+      L +     G 
Sbjct: 688 MKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGE 747

Query: 181 VNR 183
             +
Sbjct: 748 TAK 750


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 194/370 (52%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K++  GC PN+ T+  LI+GL R G   +A+ L+ +M       G+V  P TV
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD----GLV--PTTV 378

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+ LC EG  + A  +F  M      P+  TYN +I  FC   D  +A  +F +M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV+++N ++   CK G ++ A RLLE+M   G++P+A+ Y  L+ GF   G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   N  +Y+ +I+GY    +++ AL+L+ +M+  G  P    YN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + + +  A     +M + G+  +   Y +FIDGLC+NG    A ++F  +    Y
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 302 ELDIRAYNCLIDGLCKSGRLKIA--WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y+ LI GLC+ GR + A  + L   L       +V TY  ++  LC +G+  +A
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 360 RDLFLDMEAK 369
             L + M+ K
Sbjct: 679 DQLVVSMQKK 688



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 189/370 (51%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F K+   G  PNV TYNTLI G C+ G+   A+ L E M  GNG      KP+  
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM-KGNG-----LKPDAW 483

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G  + G ++ A  LF  M +  I+PN VTY ++I G+      ++A  LF +M
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P+  ++NV+++   K   + EA      M++ G+ PN   Y + +DG C  GR 
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRT 603

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA--LSLYSEMLSKGIKPDVVIYN 239
             A ++F  ME      N+++YS LI G C+    E A   +L + +   G +P+V  Y 
Sbjct: 604 GLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYT 663

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL    +   A +L   MQ+ G+      YR  + G CKN  +  A+ +F ++  L
Sbjct: 664 TLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTL 723

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++L +  Y  LI  LCK   ++ A  +F+++      +D V + +++  L  +G+ D  
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLC 783

Query: 360 RDLFLDMEAK 369
             L   ME++
Sbjct: 784 LKLLHVMESR 793



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 183/403 (45%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +  +   PN FTY +LI G CR  +  +A  +F+ M          C PN+V
Sbjct: 220 EAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG------CDPNSV 273

Query: 62  TYTTIIDGLCKEGFVDKAK-----------------------------------ELFLKM 86
           TY+T+I+GLC EG +++A                                    EL  KM
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           K     PN+ T+ +LI G      +  A  L+ +M+  G+ P  V++N ++N+LC  G+ 
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           + A  + + M+  G  P+   YN ++  FCL G + +A  +F  M   G   NV +Y+ L
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I GYCK   +  A+ L   M   G+KPD   Y  L  G     ++E A  LF  M  HG+
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + +   Y   IDG      + +A+ LF  +         + YN +I G  K+  +  A  
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               + +  L+ +V+TY   I  LC +G+   A  +F +ME +
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 6/346 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           ++ TL+  L +     +A +++ +M N     G+  +P+ +T+ T+I+ LCK+G V +AK
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS----GI--RPSLLTFNTMINILCKKGRVQEAK 222

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            +   +   +  PN  TY SLI G C  ++ + A  +F  M+  G  PN V+++ ++N L
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C  G+++EA  +LE M+Q G+ P  + Y   +   C  G  + A EL   M+  GC  N+
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +++ LI+G  ++ + E A+ LY +ML+ G+ P  V YN L   L    + E AF +F  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M  HG    T  Y   I   C  G I +A+ +F  +       ++  YN LI G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L  A  L   +    L  D  TY  +I      GK++ A  LF  M
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 173/364 (47%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +++K+   G  P++ T+NT+IN LC+ G    A  +   +      F     PN  T
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI------FRYDAYPNAFT 239

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT++I G C+   +D A  +F +M  +  +PN VTY++LI+G C      EA  +  EM+
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P V ++ + +  LC  G   EA  LL  M + G  PN   +  L+ G    G+  
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L+  M + G      +Y+ LIN  C     E A +++  MLS G  P    YN + 
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                +  +++A  +FD+M + G + +   Y T I G CK G +  A+ L   ++    +
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y  LI G  + G+L+ A  LF  +    +  + VTY  +I       K+D A  L
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 363 FLDM 366
           F  M
Sbjct: 540 FWKM 543



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 138/274 (50%), Gaps = 8/274 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ALF K+   G  P+  TYN +I+G  +T     A N   +M       G++  PN +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ----GLL--PNVI 588

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC--LFI 119
           TYT+ IDGLC+ G    A ++F +M+  N  PN+ TY+SLI+G C      +A+   L  
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            +   G +PNV ++  ++  LC  G+  EA +L+  M + G++P+  +Y  L+ G C   
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V  A  +F SM+++G + ++  Y  LI   CK   IE A  ++  ML K    D V + 
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWT 768

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            L  GL +  + +   KL   M+      +   Y
Sbjct: 769 VLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 98/226 (43%), Gaps = 35/226 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------------------ 49
           G  PNV TY + I+GLCR G T +A  +F EM   N                        
Sbjct: 582 GLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 50  ---------GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS 100
                      +G  C+PN  TYTT++ GLC EG   +A +L + M+ + + P+   Y +
Sbjct: 642 EMYNLLARLTHYG--CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRA 699

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L+ G C       A  +F  M   G Q ++  +  ++  LCK   ++EA  + + M++  
Sbjct: 700 LLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKH 759

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
              +   +  L+DG    G  +   +L   MES  C  N  +Y +L
Sbjct: 760 WNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 128/289 (44%), Gaps = 45/289 (15%)

Query: 118 FIEMMDQGVQPNVVS----FNVIMNELCKNGKMDEASRLLELMIQIGVRPN----AFVYN 169
           F+ M+++ V+  + +      ++M + C+N    E  R+ + + +I  + +       + 
Sbjct: 114 FVSMLNRLVRDRLFAPADHVRILMIKSCRNE--GEVKRVTQFLSEINSKYDFGYTLCSFT 171

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           TL+        V+ A ++++ M + G + ++ +++ +IN  CK   ++ A  + S +   
Sbjct: 172 TLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRY 231

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI--- 286
              P+   Y +L +G    H ++ AF +FD M + G   ++  Y T I+GLC  G +   
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEA 291

Query: 287 --------------------------------VEAVELFRTLRILKYELDIRAYNCLIDG 314
                                            EAVEL   ++      +I+ +  LI G
Sbjct: 292 MDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISG 351

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L + G+ +IA  L+  +    L+   VTYN +I+ LC +G+ + A  +F
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 179 GRVNRAEELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           G V R  +    + S     + + S++ L+    K   ++ A  +Y +ML+ GI+P ++ 
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +NT+   L +  +V+ A  +   + R+    + + Y + I G C+N  +  A  +F   R
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFD--R 262

Query: 298 ILKYELDIRA--YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++K   D  +  Y+ LI+GLC  GRL+ A ++   + +  +   V TY I + +LC  G 
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322

Query: 356 MDKARDLFLDMEAK 369
             +A +L   M+ +
Sbjct: 323 SSEAVELLGKMKKR 336



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 10/190 (5%)

Query: 188 FVSMESMGCKHNVFSYS----ILINGYCKNK-EIEGALSLYSEMLSK-GIKPDVVIYNTL 241
           FVSM +   +  +F+ +    IL+   C+N+ E++      SE+ SK      +  + TL
Sbjct: 114 FVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTL 173

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            I L +   V+ A  ++ +M   G+      + T I+ LCK G + EA  +     I +Y
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS--HIFRY 231

Query: 302 ELDIRA--YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +    A  Y  LI G C++  L +A+ +F  + +     + VTY+ +I+ LC++G++++A
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEA 291

Query: 360 RDLFLDMEAK 369
            D+  +M  K
Sbjct: 292 MDMLEEMVQK 301


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 194/370 (52%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K++  GC PN+ T+  LI+GL R G   +A+ L+ +M       G+V  P TV
Sbjct: 325 EAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD----GLV--PTTV 378

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+ LC EG  + A  +F  M      P+  TYN +I  FC   D  +A  +F +M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV+++N ++   CK G ++ A RLLE+M   G++P+A+ Y  L+ GF   G++
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   N  +Y+ +I+GY    +++ AL+L+ +M+  G  P    YN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + + +  A     +M + G+  +   Y +FIDGLC+NG    A ++F  +    Y
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 302 ELDIRAYNCLIDGLCKSGRLKIA--WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y+ LI GLC+ GR + A  + L   L       +V TY  ++  LC +G+  +A
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 360 RDLFLDMEAK 369
             L + M+ K
Sbjct: 679 DQLVVSMQKK 688



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 189/370 (51%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F K+   G  PNV TYNTLI G C+ G+   A+ L E M  GNG      KP+  
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIM-KGNG-----LKPDAW 483

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G  + G ++ A  LF  M +  I+PN VTY ++I G+      ++A  LF +M
Sbjct: 484 TYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKM 543

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P+  ++NV+++   K   + EA      M++ G+ PN   Y + +DG C  GR 
Sbjct: 544 VESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRT 603

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA--LSLYSEMLSKGIKPDVVIYN 239
             A ++F  ME      N+++YS LI G C+    E A   +L + +   G +P+V  Y 
Sbjct: 604 GLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYT 663

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL    +   A +L   MQ+ G+      YR  + G CKN  +  A+ +F ++  L
Sbjct: 664 TLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTL 723

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++L +  Y  LI  LCK   ++ A  +F+++      +D V + +++  L  +G+ D  
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLC 783

Query: 360 RDLFLDMEAK 369
             L   ME++
Sbjct: 784 LKLLHVMESR 793



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 183/403 (45%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +  +   PN FTY +LI G CR  +  +A  +F+ M          C PN+V
Sbjct: 220 EAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG------CDPNSV 273

Query: 62  TYTTIIDGLCKEGFVDKAK-----------------------------------ELFLKM 86
           TY+T+I+GLC EG +++A                                    EL  KM
Sbjct: 274 TYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           K     PN+ T+ +LI G      +  A  L+ +M+  G+ P  V++N ++N+LC  G+ 
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           + A  + + M+  G  P+   YN ++  FCL G + +A  +F  M   G   NV +Y+ L
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I GYCK   +  A+ L   M   G+KPD   Y  L  G     ++E A  LF  M  HG+
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + +   Y   IDG      + +A+ LF  +         + YN +I G  K+  +  A  
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               + +  L+ +V+TY   I  LC +G+   A  +F +ME +
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 174/346 (50%), Gaps = 6/346 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           ++ TL+  L +     +A +++ +M N     G+  +P+ +T+ T+I+ LCK+G V +AK
Sbjct: 169 SFTTLLIQLGKFDMVDLARDMYIKMLNS----GI--RPSLLTFNTMINILCKKGRVQEAK 222

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            +   +   +  PN  TY SLI G C  ++ + A  +F  M+  G  PN V+++ ++N L
Sbjct: 223 LIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGL 282

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C  G+++EA  +LE M+Q G+ P  + Y   +   C  G  + A EL   M+  GC  N+
Sbjct: 283 CSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNI 342

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +++ LI+G  ++ + E A+ LY +ML+ G+ P  V YN L   L    + E AF +F  
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKW 402

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M  HG    T  Y   I   C  G I +A+ +F  +       ++  YN LI G CK G 
Sbjct: 403 MLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGN 462

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L  A  L   +    L  D  TY  +I      GK++ A  LF  M
Sbjct: 463 LNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 173/364 (47%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +++K+   G  P++ T+NT+IN LC+ G    A  +   +      F     PN  T
Sbjct: 186 ARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHI------FRYDAYPNAFT 239

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT++I G C+   +D A  +F +M  +  +PN VTY++LI+G C      EA  +  EM+
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P V ++ + +  LC  G   EA  LL  M + G  PN   +  L+ G    G+  
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFE 359

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L+  M + G      +Y+ LIN  C     E A +++  MLS G  P    YN + 
Sbjct: 360 IAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEII 419

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                +  +++A  +FD+M + G + +   Y T I G CK G +  A+ L   ++    +
Sbjct: 420 KCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLK 479

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y  LI G  + G+L+ A  LF  +    +  + VTY  +I       K+D A  L
Sbjct: 480 PDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALAL 539

Query: 363 FLDM 366
           F  M
Sbjct: 540 FWKM 543



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 139/274 (50%), Gaps = 8/274 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ALF K+   G  P+  TYN +I+G  +T     A N   +M       G++  PN +
Sbjct: 535 DALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQ----GLL--PNVI 588

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC--LFI 119
           TYT+ IDGLC+ G    A ++F +M+  N  PN+ TY+SLI+G C      +A+   L  
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            +   G +PNV ++  ++  LC  G+  EA +L+  M + G++P+  +Y  L+ G C   
Sbjct: 649 RLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNL 708

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V  A  +F SM+++G + ++  Y  LI   CK   IE A  ++  ML K    D V++ 
Sbjct: 709 KVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWT 768

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            L  GL +  + +   KL   M+      +   Y
Sbjct: 769 VLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTY 802



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 35/226 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------------------ 49
           G  PNV TY + I+GLCR G T +A  +F EM   N                        
Sbjct: 582 GLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641

Query: 50  ---------GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS 100
                      +G  C+PN  TYTT++ GLC EG   +A +L + M+ + + P+   Y +
Sbjct: 642 EMYNLLARLTHYG--CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRA 699

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L+ G C       A  +F  M   G Q ++  +  ++  LCK   ++EA  + + M++  
Sbjct: 700 LLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKH 759

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
              +  V+  L+DG    G  +   +L   MES  C  N  +Y +L
Sbjct: 760 WNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVML 805



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/289 (22%), Positives = 128/289 (44%), Gaps = 45/289 (15%)

Query: 118 FIEMMDQGVQPNVVS----FNVIMNELCKNGKMDEASRLLELMIQIGVRPN----AFVYN 169
           F+ M+++ V+  + +      ++M + C+N    E  R+ + + +I  + +       + 
Sbjct: 114 FVSMLNRLVRDRLFAPADHVRILMIKSCRNE--GEVKRVTQFLSEINSKYDFGYTLCSFT 171

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           TL+        V+ A ++++ M + G + ++ +++ +IN  CK   ++ A  + S +   
Sbjct: 172 TLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRY 231

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI--- 286
              P+   Y +L +G    H ++ AF +FD M + G   ++  Y T I+GLC  G +   
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEA 291

Query: 287 --------------------------------VEAVELFRTLRILKYELDIRAYNCLIDG 314
                                            EAVEL   ++      +I+ +  LI G
Sbjct: 292 MDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISG 351

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L + G+ +IA  L+  +    L+   VTYN +I+ LC +G+ + A  +F
Sbjct: 352 LSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIF 400



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 179 GRVNRAEELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           G V R  +    + S     + + S++ L+    K   ++ A  +Y +ML+ GI+P ++ 
Sbjct: 145 GEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLT 204

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +NT+   L +  +V+ A  +   + R+    + + Y + I G C+N  +  A  +F   R
Sbjct: 205 FNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFD--R 262

Query: 298 ILKYELDIRA--YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++K   D  +  Y+ LI+GLC  GRL+ A ++   + +  +   V TY I + +LC  G 
Sbjct: 263 MVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGC 322

Query: 356 MDKARDLFLDMEAK 369
             +A +L   M+ +
Sbjct: 323 SSEAVELLGKMKKR 336



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 10/190 (5%)

Query: 188 FVSMESMGCKHNVFSYS----ILINGYCKNK-EIEGALSLYSEMLSK-GIKPDVVIYNTL 241
           FVSM +   +  +F+ +    IL+   C+N+ E++      SE+ SK      +  + TL
Sbjct: 114 FVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTL 173

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            I L +   V+ A  ++ +M   G+      + T I+ LCK G + EA  +     I +Y
Sbjct: 174 LIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMS--HIFRY 231

Query: 302 ELDIRA--YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +    A  Y  LI G C++  L +A+ +F  + +     + VTY+ +I+ LC++G++++A
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEA 291

Query: 360 RDLFLDMEAK 369
            D+  +M  K
Sbjct: 292 MDMLEEMVQK 301


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 187/389 (48%), Gaps = 33/389 (8%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV------------- 54
           ++LRV   EP + TYNTL++   + G    A  L +EM    G F +             
Sbjct: 229 LQLRV---EPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLA 285

Query: 55  -----------------VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
                              K ++ TY  +I  L + GFV KA+ L ++M++E I P VVT
Sbjct: 286 REGHLENAVKLVDSMRLSKKASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVT 345

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           YN++IHG         A+  F EM   G+ P+V+++N ++N  CK G + EA  LL  + 
Sbjct: 346 YNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLR 405

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G+ P    YNTL+DG+C  G +  A  L   M   GC  +V +Y+IL+NG  K + + 
Sbjct: 406 RAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLA 465

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A   + EMLSKG++PD   YNT       +     AF+L + M   G+  DT  Y   I
Sbjct: 466 MAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVII 525

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           DGLCK G + +A  L   +     + D   Y CLI   C+ G L+ A +L   +    L 
Sbjct: 526 DGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQ 585

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
             VVTY I++H  C  G +  A   F  M
Sbjct: 586 PSVVTYTILVHTCCRRGNLYSAYGWFRKM 614



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 177/366 (48%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL M++   G  P V TYN +I+GL +      A   F EM       G++  P+ +
Sbjct: 326 KAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMR----AMGLL--PDVI 379

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++++  CK G + +A  L   ++   + P V+TYN+LI G+C   D  EA+ L  EM
Sbjct: 380 TYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEM 439

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG  P+V ++ ++MN   K   +  A    + M+  G++P+ F YNT +         
Sbjct: 440 VEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSST 499

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M   G   +  +Y+++I+G CK   ++ A  L ++M+S G++PD + Y  L
Sbjct: 500 PMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCL 559

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E   +  A KL + M   G+      Y   +   C+ G +  A   FR +  +  
Sbjct: 560 IHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGI 619

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E +   YN LI  LC +GR  +A+  F  +    L  +  TY ++I   C +G    A  
Sbjct: 620 EPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIR 679

Query: 362 LFLDME 367
           L+ +M 
Sbjct: 680 LYFEMH 685



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 125/247 (50%), Gaps = 6/247 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F ++   G +P+ F YNT I        T +A  L E M       G+   P+TVT
Sbjct: 467 AREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLK----GIY--PDTVT 520

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  IIDGLCK G +  AK L  KM  + + P+ +TY  LIH  C      EA+ L   M+
Sbjct: 521 YNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMV 580

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+QP+VV++ ++++  C+ G +  A      M+ +G+ PN   YN L+   C+TGR  
Sbjct: 581 SDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTP 640

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A   F  M   G   N ++Y++LI+G C+      A+ LY EM   GI PD   +N LF
Sbjct: 641 LAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 700

Query: 243 IGLFEIH 249
            G  E H
Sbjct: 701 KGFDEGH 707



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 165/346 (47%), Gaps = 7/346 (2%)

Query: 2   EAAAL-FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EAA + F ++R  G  P+V TYN+L+N  C+ G+   AL L  ++            P  
Sbjct: 360 EAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAG------LAPTV 413

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+IDG C+ G + +A+ L  +M ++   P+V TY  L++G     +   A+  F E
Sbjct: 414 LTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDE 473

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+QP+  ++N  +           A +L E+M+  G+ P+   YN ++DG C TG 
Sbjct: 474 MLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 533

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A+ L   M S G + +  +Y+ LI+ +C+   +  A  L + M+S G++P VV Y  
Sbjct: 534 LKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTI 593

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L         +  A+  F +M   G+  +   Y   I  LC  G    A   F  +    
Sbjct: 594 LVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERG 653

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
              +   Y  LIDG C+ G    A  L+  + +  +  D  T+N +
Sbjct: 654 LAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNAL 699



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 157/334 (47%), Gaps = 52/334 (15%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ--GVQPNVVSFN 134
           D  + ++ +M    + P +VTYN+L+  F      +EA  L  EM  Q  G   N V+FN
Sbjct: 219 DDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGFSLNDVTFN 278

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           V+++ L + G ++ A +L++ M ++  + ++F YN L+      G V +AE L + ME+ 
Sbjct: 279 VVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITALLERGFVRKAEALQMEMENE 337

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G    V +Y+ +I+G  K ++ E A   ++EM + G+ PDV+ YN+L     +   ++ A
Sbjct: 338 GIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEA 397

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL-------DIRA 307
             L  +++R G+A     Y T IDG C+ G + EA       R LK E+       D+  
Sbjct: 398 LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEA-------RRLKEEMVEQGCFPDVCT 450

Query: 308 YNCLIDGLCKSGRLKIAWELF-------------------------RSLP-----RGVLI 337
           Y  L++G  K   L +A E F                          S P     R V++
Sbjct: 451 YTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMM 510

Query: 338 -----ADVVTYNIMIHALCADGKMDKARDLFLDM 366
                 D VTYN++I  LC  G +  A+ L   M
Sbjct: 511 LKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/281 (29%), Positives = 136/281 (48%), Gaps = 3/281 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P+V   N ++     A  W++ + ++ EM+   V+P +V++N +++   K G+ DEAS
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 151 RLLELMIQIG--VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
            LL+ M   G     N   +N ++      G +  A +L  SM  +  K + F+Y+ LI 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR-LSKKASSFTYNPLIT 316

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +   +  A +L  EM ++GI P VV YN +  GL +  Q E A   F EM+  G+  
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLP 376

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           D   Y + ++  CK G + EA+ L   LR       +  YN LIDG C+ G L  A  L 
Sbjct: 377 DVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLK 436

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +       DV TY I+++       +  AR+ F +M +K
Sbjct: 437 EEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSK 477



 Score = 44.7 bits (104), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 3/150 (2%)

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L+ +  +   G+ PDV   N +   L +  + +    ++ EM +  V      Y T +D 
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 280 LCKNGYIVEAVELFRTLRIL--KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             K G   EA  L + +      + L+   +N +I  L + G L+ A +L  S+ R    
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKK 305

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
           A   TYN +I AL   G + KA  L ++ME
Sbjct: 306 ASSFTYNPLITALLERGFVRKAEALQMEME 335


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 196/368 (53%), Gaps = 12/368 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++ V  C P+ +TY TL++GLC+      A++L +EM          C P+  T
Sbjct: 200 AIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEG------CFPSPAT 253

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I+GLCK+G   +  +L   M  +   PN VTYN+LIHG C     ++A  L   M+
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                PN V++  I+N L K G+  + +R+L LM + G   N +VY+ L+ G    G+  
Sbjct: 314 SSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSE 373

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF      GCK N   YS L++G C++++ + A+ + SEM  KG  P+   +++L 
Sbjct: 374 EAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFTFSSLM 433

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G FE+    +A +++ +M +   A +   Y   I GLCK+G ++EA+ ++  +      
Sbjct: 434 KGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKMLATGCR 493

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSL----PRGVLIADVVTYNIMIHALCADGKMDK 358
            D+ AY+ +I GLC +G ++ A +L+  +    P      DV+TYNI+ +ALC    + +
Sbjct: 494 PDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQ--PDVITYNILFNALCKQSSISR 551

Query: 359 ARDLFLDM 366
           A DL   M
Sbjct: 552 AVDLLNSM 559



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 199/418 (47%), Gaps = 64/418 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  ++++ GC P+  T+N LINGLC+ G       L + M      F   C PN V
Sbjct: 234 EAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNM------FLKGCVPNEV 287

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------- 106
           TY T+I GLC +G +DKA  L  +M      PN VTY ++I+G                 
Sbjct: 288 TYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLM 347

Query: 107 -----YANDW---------------NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                  N++                EA  LF E MD+G + N V ++ +++ LC++ K 
Sbjct: 348 EERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKP 407

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA ++L  M   G  PNAF +++LM GF   G  ++A E++  M  + C  N   YS+L
Sbjct: 408 DEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVL 467

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM--QRH 264
           I+G CK+ ++  A+ ++++ML+ G +PDVV Y+++  GL +   VE A KL++EM     
Sbjct: 468 IHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEP 527

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRT----------------LRILKYELD---- 304
               D   Y    + LCK   I  AV+L  +                LR+L+ +LD    
Sbjct: 528 DSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFLRMLREKLDPPQD 587

Query: 305 -IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +  + L+  L K  R   A ++   + +  L     T+  ++H LC   K+    D
Sbjct: 588 GAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQPKKIQAVID 645



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 191/369 (51%), Gaps = 6/369 (1%)

Query: 2   EAAALFMKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A  LF ++   F C+P V ++N+++N + + G    AL  +  +  G  +  ++  PN 
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVV-GAKDMNIL--PNV 181

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +++  II  +CK G VD A ELF +M      P+  TY +L+ G C  +  +EA  L  E
Sbjct: 182 LSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDE 241

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  P+  +FNV++N LCK G     ++L++ M   G  PN   YNTL+ G CL G+
Sbjct: 242 MQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGK 301

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIYN 239
           +++A  L   M S  C  N  +Y  +ING  K  + ++GA  L   M  +G   +  +Y+
Sbjct: 302 LDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVL-MEERGYIVNEYVYS 360

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GLF+  + E A +LF E    G   +T  Y   +DGLC++    EA+++   +   
Sbjct: 361 VLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDK 420

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +   ++ L+ G  + G    A E+++ + +     + V Y+++IH LC DGK+ +A
Sbjct: 421 GCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEA 480

Query: 360 RDLFLDMEA 368
             ++  M A
Sbjct: 481 MMVWAKMLA 489



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 150/303 (49%), Gaps = 6/303 (1%)

Query: 72  KEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLF---IEMMDQGVQ 127
           K    +KA ELF +M  E    P V ++NS+++    A   + A   +   +   D  + 
Sbjct: 119 KAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNIL 178

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PNV+SFN+I+  +CK G +D A  L   M      P+A+ Y TLMDG C   R++ A  L
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M+  GC  +  ++++LING CK  +      L   M  KG  P+ V YNTL  GL  
Sbjct: 239 LDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 298

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             ++++A  L D M       +   Y T I+GL K G  ++   +   +    Y ++   
Sbjct: 299 KGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYV 358

Query: 308 YNCLIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y+ L+ GL K G+ + A  LF+ S+ +G  + + V Y+ ++  LC D K D+A  +  +M
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKL-NTVLYSALVDGLCRDRKPDEAMKILSEM 417

Query: 367 EAK 369
             K
Sbjct: 418 TDK 420



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 24/185 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  ++ K+   GC P+V  Y+++I GLC  G    AL L+ EM     +     +P+ 
Sbjct: 478 MEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPD----SQPDV 533

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY  + + LCK+  + +A +L   M D   +P++VT N                 +F+ 
Sbjct: 534 ITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCN-----------------IFLR 576

Query: 121 MMDQGVQP---NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           M+ + + P        + ++  L K  +   AS+++E+M+Q  + P A  +  ++   C 
Sbjct: 577 MLREKLDPPQDGAKFLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTWARVVHELCQ 636

Query: 178 TGRVN 182
             ++ 
Sbjct: 637 PKKIQ 641



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 104/237 (43%), Gaps = 15/237 (6%)

Query: 142 KNGKMDEASRLLELMIQIGVRPNAF-----VYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +NG   E+S + + +     +  +F      + +L++ +  +   N  E++   +  M  
Sbjct: 44  ENGSEPESSPISDKIFSSPPKMGSFKVGDSTFYSLIENYAYSSDFNSLEKV---LNRMRL 100

Query: 197 KHNVFS---YSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQVE 252
           ++ VFS   + ++   Y K      A+ L+  M      KP V  +N++   + +    +
Sbjct: 101 ENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHD 160

Query: 253 RAFKLFDEM---QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           RA + ++ +   +   +  +  ++   I  +CK G +  A+ELFR + + K   D   Y 
Sbjct: 161 RALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYC 220

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            L+DGLCK  R+  A  L   +          T+N++I+ LC  G   +   L  +M
Sbjct: 221 TLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNM 277


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 204/368 (55%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+   ++++  G +P+  T+   I G  +TG    A   F+EM     + G++  PN  
Sbjct: 526 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML----DHGLM--PNNP 579

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +I+G  K G + +A  +F ++    + P+V T ++ IHG        EA  +F E+
Sbjct: 580 LYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSEL 639

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V +++ +++  CK G++++A  L + M   G+ PN F+YN L+DG C +G +
Sbjct: 640 KEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDI 699

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA +LF  M   G + +  +YS +I+GYCK++ +  A SL+ EM SKG++P   +YN L
Sbjct: 700 QRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNAL 759

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +E+A  LF EM + G A  T ++ T IDG CK+  I EA +LF+ +   + 
Sbjct: 760 VHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQI 818

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y  +ID  CK+G+++ A  LF+ +    LI D VTY  +++     G+  +   
Sbjct: 819 MPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFA 878

Query: 362 LFLDMEAK 369
           LF  M AK
Sbjct: 879 LFEKMVAK 886



 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 200/399 (50%), Gaps = 30/399 (7%)

Query: 1   MEAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN-----GEFGV 54
           ME AA  +K +   GC+PN  T+  LI G CR  +   AL L +EM   N       +G 
Sbjct: 384 MEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGA 443

Query: 55  VC------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           +                         KPN V Y+ +I     EG +++A+ L   M    
Sbjct: 444 MINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSG 503

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P++  YN++I     A    EA    +E+  +G++P+ V+F   +    K GKM EA+
Sbjct: 504 VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAA 563

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +  + M+  G+ PN  +Y  L++G    G +  A  +F  + ++G   +V + S  I+G 
Sbjct: 564 KYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGL 623

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            KN  ++ AL ++SE+  KG+ PDV  Y++L  G  +  +VE+AF+L DEM   G+A + 
Sbjct: 624 LKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNI 683

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + Y   +DGLCK+G I  A +LF  +     E D   Y+ +IDG CKS  +  A+ LF  
Sbjct: 684 FIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHE 743

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +P   +      YN ++H  C +G M+KA +LF +M  K
Sbjct: 744 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQK 782



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 185/356 (51%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   N+ TYN LI+GLC+ G    A  + + M        + CKPN+ T+  +I+G C+E
Sbjct: 363 GIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT------LGCKPNSRTFCLLIEGYCRE 416

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A EL  +M+  N+ P+ V+Y ++I+G C+  D + A  L  +M   G++PNVV +
Sbjct: 417 HNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVY 476

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++++      G+++EA RLL+ M   GV P+ F YN ++      G++  A    + ++ 
Sbjct: 477 SILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQG 536

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K +  ++   I GY K  ++  A   + EML  G+ P+  +Y  L  G F+   +  
Sbjct: 537 RGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLME 596

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +F  +   GV  D      FI GL KNG + EA+++F  L+      D+  Y+ LI 
Sbjct: 597 ALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLIS 656

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G CK G ++ A+EL   +    +  ++  YN ++  LC  G + +AR LF  M  K
Sbjct: 657 GFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEK 712



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 195/366 (53%), Gaps = 7/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA ++F +L   G  P+V T +  I+GL + G    AL +F E+     E G+V  P+ 
Sbjct: 595 MEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELK----EKGLV--PDV 648

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY+++I G CK+G V+KA EL  +M  + I PN+  YN+L+ G C + D   A+ LF  
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++P+ V+++ +++  CK+  + EA  L   M   GV+P++FVYN L+ G C  G 
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A  LF  M   G      S++ LI+GYCK+ +I+ A  L+ EM++K I PD V Y T
Sbjct: 769 MEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 827

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +     +  ++E A  LF EMQ   +  DT  Y + + G  K G   E   LF  +    
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKG 887

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D   Y  +I   CK   L  A++L   +    ++     ++++I ALC    + +A 
Sbjct: 888 VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEAS 947

Query: 361 DLFLDM 366
            L  +M
Sbjct: 948 KLLDEM 953



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 188/362 (51%), Gaps = 7/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +L+  G  P+VFTY++LI+G C+ G    A  L +EM       G+   PN  
Sbjct: 631 EALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK----GIA--PNIF 684

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  ++DGLCK G + +A++LF  M ++ + P+ VTY+++I G+C + +  EA  LF EM
Sbjct: 685 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 744

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GVQP+   +N +++  CK G M++A  L   M+Q G       +NTL+DG+C + ++
Sbjct: 745 PSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKI 803

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M +     +  +Y+ +I+ +CK  ++E A  L+ EM  + +  D V Y +L
Sbjct: 804 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSL 863

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ Q    F LF++M   GV  D   Y   I   CK   +VEA +L   +     
Sbjct: 864 MYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGM 923

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 ++ LI  LCK   L  A +L   +    L   +   N ++ +    GKMD+A  
Sbjct: 924 LTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATR 983

Query: 362 LF 363
           +F
Sbjct: 984 VF 985



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 179/349 (51%), Gaps = 7/349 (2%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  PN+F YN L++GLC++G    A  LF+ M     E      P++VTY+T+IDG CK 
Sbjct: 678  GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE------PDSVTYSTMIDGYCKS 731

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              V +A  LF +M  + + P+   YN+L+HG C   D  +A  LF EM+ +G     +SF
Sbjct: 732  ENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSF 790

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            N +++  CK+ K+ EAS+L + MI   + P+   Y T++D  C  G++  A  LF  M+ 
Sbjct: 791  NTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQE 850

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                 +  +Y+ L+ GY K  +     +L+ +M++KG+KPD V Y  +     +   +  
Sbjct: 851  RNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVE 910

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
            AFKL DE+   G+      +   I  LCK   + EA +L   +  L  +  + A N L+ 
Sbjct: 911  AFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVR 970

Query: 314  GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
               ++G++  A  +F  +    L+ D  T   +++    D   + AR+L
Sbjct: 971  SFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNL 1019



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 170/349 (48%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V+TY  L+  LC+TG    A  +  EM     E G+   PN   Y+ +I+G+C+ G +D
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEM----DEKGL--NPNEFIYSLVIEGMCQVGDID 280

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A EL   M ++ + PN  TY  +  G C A   NEAK  F EM   G++P+  + + ++
Sbjct: 281 EAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALI 340

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +   + G +DE  R+ ++M+  G+  N   YN L+ G C  G++ +A E+   M ++GCK
Sbjct: 341 DGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCK 400

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  ++ +LI GYC+   +  AL L  EM  + + P  V Y  +  GL     +  A KL
Sbjct: 401 PNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKL 460

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            ++M   G+  +   Y   I      G I EA  L   +       DI  YN +I  L K
Sbjct: 461 LEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSK 520

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +G+++ A      +    L  D VT+   I      GKM +A   F +M
Sbjct: 521 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEM 569



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 175/349 (50%), Gaps = 10/349 (2%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           N+L+  L + G     + LF ++ NG  + + G     +  TYT ++  LCK G +  AK
Sbjct: 197 NSLLKDLLKCG----MMELFWKVYNGMLDAKMGF----DVYTYTYLVGALCKTGDLRGAK 248

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            + ++M ++ +NPN   Y+ +I G C   D +EA  L   M ++G+ PN  ++ +I   L
Sbjct: 249 RVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGL 308

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+  +M+EA    E M + G++P+    + L+DGF   G ++    +   M S G   N+
Sbjct: 309 CRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINL 368

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y++LI+G CK  ++E A  +   M++ G KP+   +  L  G    H + RA +L DE
Sbjct: 369 ITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDE 428

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M++  +     +Y   I+GLC    +  A +L   +     + ++  Y+ LI      GR
Sbjct: 429 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGR 488

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++ A  L   +    +  D+  YN +I  L   GKM++A    L+++ +
Sbjct: 489 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 537



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 145/293 (49%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           + V +  +ID   + G +D+A  +F   K+++I  +++  NSL+              ++
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVY 216

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M+D  +  +V ++  ++  LCK G +  A R+L  M + G+ PN F+Y+ +++G C  
Sbjct: 217 NGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQV 276

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++ A EL  SM   G   N ++Y+I+  G C+ K +  A   + EM   G+KPD    
Sbjct: 277 GDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNAC 336

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           + L  G      ++   ++ D M   G+  +   Y   I GLCK G + +A E+ + +  
Sbjct: 337 SALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVT 396

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L  + + R +  LI+G C+   +  A EL   + +  L+   V+Y  MI+ LC
Sbjct: 397 LGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 449



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 136/278 (48%), Gaps = 7/278 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA +LF ++   G +P+ F YN L++G C+ G    A+NLF EM              T+
Sbjct: 736  EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-------ATTL 788

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++ T+IDG CK   + +A +LF +M  + I P+ VTY ++I   C A    EA  LF EM
Sbjct: 789  SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEM 848

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++ +  + V++  +M    K G+  E   L E M+  GV+P+   Y  ++   C    +
Sbjct: 849  QERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 908

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              A +L   +   G       + +LI   CK +++  A  L  EM   G+KP +   NTL
Sbjct: 909  VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTL 968

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
                 E  +++ A ++F+ ++  G+  DT      ++G
Sbjct: 969  VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 1006



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 132/274 (48%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           V ++ LI  +      +EA  +F    +  +  +++  N ++ +L K G M+   ++   
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+   +  + + Y  L+   C TG +  A+ + + M+  G   N F YS++I G C+  +
Sbjct: 219 MLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGD 278

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A+ L   M  KG+ P+   Y  +  GL    ++  A   F+EMQ+ G+  D  A   
Sbjct: 279 IDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 338

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDG  + G I E + +   +      +++  YN LI GLCK G+++ A E+ + +    
Sbjct: 339 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG 398

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +  T+ ++I   C +  M +A +L  +ME +
Sbjct: 399 CKPNSRTFCLLIEGYCREHNMGRALELLDEMEKR 432



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 6/226 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA+ LF ++      P+  TY T+I+  C+ G    A  LF+EM   N         +TV
Sbjct: 805  EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN------LIVDTV 858

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TYT+++ G  K G   +   LF KM  + + P+ VTY  +I+  C  ++  EA  L  E+
Sbjct: 859  TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEV 918

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + +G+       ++++  LCK   + EAS+LL+ M ++G++P+    NTL+  F   G++
Sbjct: 919  VGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKM 978

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            + A  +F  ++S+G   +  +   L+NG   + + E A +L  +++
Sbjct: 979  DEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 188/353 (53%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYNT ++GLC+ GH   AL + + M     +      P+  TY T+I+ L K 
Sbjct: 297 GFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKN 350

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+AK +  +M D    P+  T+N+LI      N   EA  L  E+  +G+ P+V +F
Sbjct: 351 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTF 410

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK G      RL E M   G  P+   YN L+D  C  G++  A +L   MES
Sbjct: 411 NILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMES 470

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+  CK   IE A  ++ +M ++GI    V +NTL  GL +  +++ 
Sbjct: 471 NGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDD 530

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L ++M + G+  +   Y + +   CK G I +A ++  T+    +E+D+  Y  LI+
Sbjct: 531 ATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLIN 590

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+GR ++A +L R +    +      YN +I +L     +  A +LF +M
Sbjct: 591 GLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREM 643



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 188/354 (53%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+VFTYNT+IN L + G    A  +  +M +        C P+T T+ T+I  L  +
Sbjct: 332 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG------CLPDTTTFNTLIVALSSQ 385

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A +L  ++  + ++P+V T+N LI+  C   D +    LF EM   G  P+ V++
Sbjct: 386 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTY 445

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC  GK+  A  LL  M   G   +   YNT++D  C   R+  AEE+F  M++
Sbjct: 446 NILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDA 505

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +++ LI+G CK K I+ A  L  +M+ +G++P+ + YN++     +   +++
Sbjct: 506 QGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKK 565

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + + M  +G   D   Y T I+GLCK G    A++L R +RI       +AYN +I 
Sbjct: 566 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 625

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDM 366
            L +   L+ A  LFR +       D +TY I+  +LC   G + +A D  ++M
Sbjct: 626 SLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEM 679



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 105/319 (32%), Positives = 167/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +L V G  P+V+T+N LIN LC+ G   + + LFEEM +        C P+ V
Sbjct: 390 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG------CTPDEV 443

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC  G +  A +L  +M+      + VTYN++I   C      EA+ +F +M
Sbjct: 444 TYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQM 503

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+  + V+FN +++ LCK  ++D+A+ L+E M++ G++PN   YN+++  +C  G +
Sbjct: 504 DAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNI 563

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL L   M  KGI+P    YN +
Sbjct: 564 KKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPV 623

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+     LC+  G I EA +    +    
Sbjct: 624 IQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKG 683

Query: 301 YELDIRAYNCLIDGLCKSG 319
           +  +  ++  L +GL   G
Sbjct: 684 FMPEFSSFRMLAEGLLNLG 702



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 178/358 (49%), Gaps = 6/358 (1%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
            FG + +   +N L+N L       +  +++ EM  G G      +P+ VT  T+I  LC
Sbjct: 155 TFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMT-GRG-----IQPDVVTLNTLIKALC 208

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +   V  A  +  +M    + P+  T+ +L+ GF        A  +  +MM+ G  P  V
Sbjct: 209 RAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGV 268

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + NV++N  CK G++++A   ++  I  G  P+   YNT + G C  G V+ A ++   M
Sbjct: 269 TVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLM 328

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   +VF+Y+ +IN   KN E++ A  + ++M+ +G  PD   +NTL + L   +++
Sbjct: 329 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRL 388

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A  L  E+   G++ D + +   I+ LCK G     + LF  ++      D   YN L
Sbjct: 389 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNIL 448

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ID LC  G+L  A +L   +         VTYN +I ALC   ++++A ++F  M+A+
Sbjct: 449 IDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQ 506



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 3/235 (1%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+   +  I+ +L   G  D    L+  M + G +  A V  + ++ +    R + A +L
Sbjct: 87  PSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDL 146

Query: 188 FVSM---ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ++    ++ G + +   ++ L+N   +  +++   S+Y+EM  +GI+PDVV  NTL   
Sbjct: 147 VLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKA 206

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L   HQV  A  + +EM  HGVA D   + T + G  + G I  A+ +   +        
Sbjct: 207 LCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPT 266

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               N LI+G CK GR++ A    +         D VTYN  +H LC +G +  A
Sbjct: 267 GVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHA 321



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   G E +V TY TLINGLC+ G T VAL L   M           +P   
Sbjct: 565 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG------IRPTPK 618

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  +I  L +   +  A  LF +M +    P+ +TY  +    C       EA    +E
Sbjct: 619 AYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVE 678

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+++G  P   SF ++   L   G  D     +EL+I+
Sbjct: 679 MVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 716


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 181/336 (53%), Gaps = 6/336 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  LI   C       A+ L +EM          CKP+ VTY  +I+G+CKEG
Sbjct: 239 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG------CKPDVVTYNVLINGICKEG 292

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A +    M      PNV+T+N ++   C    W +A+ L  +M+ +G  P+VV+FN
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++N LC+   +  A  +LE M + G  PN+  YN L+ GFC   +++RA E    M S 
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ L+   CK+ +++ A+ + +++ SKG  P ++ YNT+  GL ++ + E A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L +EM+R G+  D   Y T + GL + G + EA+++F  +  L  +     YN ++ G
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 532

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           LCK+ +   A +    +          TY I+I  +
Sbjct: 533 LCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 193/387 (49%), Gaps = 44/387 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V    +LI G CR+G T  A  + E + N     G V  P+ +TY  +I G CK G +
Sbjct: 139 PDVIACTSLIRGFCRSGKTKKATRIMEILENS----GAV--PDVITYNVLIGGYCKSGEI 192

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA----------KC---------- 116
           DKA E+  +M   ++ P+VVTYN+++   C +    EA          +C          
Sbjct: 193 DKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTIL 249

Query: 117 ---------------LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
                          L  EM  +G +P+VV++NV++N +CK G++DEA + L  M   G 
Sbjct: 250 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGC 309

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
           +PN   +N ++   C TGR   AE L   M   GC  +V +++ILIN  C+ + +  A+ 
Sbjct: 310 KPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAID 369

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +  +M   G  P+ + YN L  G  +  +++RA +  + M   G   D   Y T +  LC
Sbjct: 370 VLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 429

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K+G +  AVE+   L        +  YN +IDGL K G+ + A EL   + R  L  D++
Sbjct: 430 KDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDII 489

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEA 368
           TY+ ++  L  +GK+D+A  +F DME 
Sbjct: 490 TYSTLLRGLGREGKVDEAIKIFHDMEG 516



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 185/353 (52%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNT++  LC +G       L E M   + +    C P+ +TYT +I+  C +  V
Sbjct: 206 PDVVTYNTILRSLCDSG------KLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGV 259

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A +L  +M+ +   P+VVTYN LI+G C     +EA      M   G +PNV++ N+I
Sbjct: 260 GQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNII 319

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  +C  G+  +A RLL  M++ G  P+   +N L++  C    + RA ++   M   GC
Sbjct: 320 LRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 379

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N  SY+ L++G+C+ K+++ A+     M+S+G  PD+V YNTL   L +  +V+ A +
Sbjct: 380 VPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVE 439

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + +++   G +     Y T IDGL K G    AVEL   +R    + DI  Y+ L+ GL 
Sbjct: 440 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLG 499

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + G++  A ++F  +    +    VTYN ++  LC   +  +A D    M  K
Sbjct: 500 REGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 552



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/290 (27%), Positives = 150/290 (51%), Gaps = 3/290 (1%)

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           L + G +++  +   +M  +   P+V+   SLI GFC +    +A  +   + + G  P+
Sbjct: 116 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPD 175

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V+++NV++   CK+G++D+A   LE++ ++ V P+   YNT++   C +G++  A E+  
Sbjct: 176 VITYNVLIGGYCKSGEIDKA---LEVLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLD 232

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
                 C  +V +Y+ILI   C +  +  A+ L  EM  KG KPDVV YN L  G+ +  
Sbjct: 233 RQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +++ A K  + M  +G   +   +   +  +C  G  ++A  L   +        +  +N
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            LI+ LC+   L  A ++   +P+   + + ++YN ++H  C + KMD+A
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRA 402



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 128/233 (54%), Gaps = 3/233 (1%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+ + +L +NG+++E  + LE MI  G  P+     +L+ GFC +G+  +A  +   +E+
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V +Y++LI GYCK+ EI+ AL +   M    + PDVV YNT+   L +  +++ 
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++ D   +     D   Y   I+  C +  + +A++L   +R    + D+  YN LI+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G+CK GRL  A +   ++P      +V+T+NI++ ++C+ G+   A  L  DM
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDM 339



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 131/247 (53%), Gaps = 6/247 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   GC P+V T+N LIN LCR      A+++ E+M          C PN+
Sbjct: 330 MDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG------CVPNS 383

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G C+E  +D+A E    M      P++VTYN+L+   C     + A  +  +
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK + A  LLE M + G++P+   Y+TL+ G    G+
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A ++F  ME +  K +  +Y+ ++ G CK ++   A+   + M+ KG KP    Y  
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563

Query: 241 LFIGLFE 247
           L  G+ +
Sbjct: 564 LIEGIAD 570



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 85/170 (50%), Gaps = 5/170 (2%)

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           F+ +I +    +N E+E  L     M+ +G  PDV+   +L  G     + ++A ++ + 
Sbjct: 107 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEI 166

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           ++  G   D   Y   I G CK+G I +A+E+   + +     D+  YN ++  LC SG+
Sbjct: 167 LENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAP---DVVTYNTILRSLCDSGK 223

Query: 321 LKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LK A E+  R L R     DV+TY I+I A C D  + +A  L  +M  K
Sbjct: 224 LKEAMEVLDRQLQRECY-PDVITYTILIEATCNDSGVGQAMKLLDEMRKK 272


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/365 (33%), Positives = 200/365 (54%), Gaps = 8/365 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF+++R  G  P+V TYN+LI+G  + G      +LF EM +      V C P+ +TY  
Sbjct: 252 LFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKD------VGCVPDIITYNG 305

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+  CK   + +A E F +MK+  + PNVVTY++LI  FC       A  L  +M   G
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PN  ++  +++  CK G + EA +LL  M+Q GV+ N   Y  L+DG C  GR+  AE
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F SM   G   N   Y+ L++GY K + +E A+ +  +M    IKPD+++Y ++  G 
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGH 485

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               ++E    + +EM+  G++A+     T ID   K G   +A+  F+ ++ +  E  I
Sbjct: 486 CSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATI 545

Query: 306 RAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             Y  LIDGLC++G +++A + F R L  G L  +V  Y  +I  LC +  ++ A+ LF 
Sbjct: 546 VTYCVLIDGLCEAGIVELAVDYFCRMLSLG-LQPNVAVYTSLIDGLCXNNCIESAKKLFD 604

Query: 365 DMEAK 369
           +M+ +
Sbjct: 605 EMQCR 609



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 184/358 (51%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E A+LF +++  GC P++ TYN LIN  C+      A   F EM N NG      KPN V
Sbjct: 283 EVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN-NG-----LKPNVV 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+ID  CKEG +  A +L   M+   + PN  TY SLI   C A +  EA  L  +M
Sbjct: 337 TYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 396

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+ N+V++  +++ LCK G+M EA  +   M++ G+ PN  VY  L+ G+    R+
Sbjct: 397 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 456

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M     K ++  Y  +I G+C  +++E    +  EM S+GI  + VI  T+
Sbjct: 457 EDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTI 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               F+  +   A   F EMQ  GV A    Y   IDGLC+ G +  AV+ F  +  L  
Sbjct: 517 IDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGL 576

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + ++  Y  LIDGLC +  ++ A +LF  +    +  D+  +  +I      G + +A
Sbjct: 577 QPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 634



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   +R  G  PN FTY +LI+  C+ G+   A  L  +M       GV  K N VT
Sbjct: 354 AIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQA----GV--KLNIVT 407

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT ++DGLCK G + +A+E+F  M  + I+PN   Y +L+HG+  A    +A  +  +M 
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  ++P+++ +  I+   C   K++E   +LE M   G+  N  +  T++D +   G+ +
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A   F  M+ +G +  + +Y +LI+G C+   +E A+  +  MLS G++P+V +Y +L 
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL   + +E A KLFDEMQ  G+  D  A+   IDG  K+G + EA+ L   +  L  E
Sbjct: 588 DGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 647

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y  L+ G  + G L  A + F  +    ++ + V    ++      G++D+A +L
Sbjct: 648 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 707

Query: 363 FLDME 367
             +ME
Sbjct: 708 KNEME 712



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 169/312 (54%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           +C   +  +  +     + G +++A E F +M++    P   + N L+H    + +    
Sbjct: 155 ICVSGSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLV 214

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           +  F +M+  G+ P+V ++NV+++ LCK G ++ + RL   M ++G+ P+   YN+L+DG
Sbjct: 215 RKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDG 274

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +   G +     LF  M+ +GC  ++ +Y+ LIN YCK +++  A   +SEM + G+KP+
Sbjct: 275 YGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPN 334

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+TL     +   ++ A KL  +M+R G+  + + Y + ID  CK G + EA +L  
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +     +L+I  Y  L+DGLCK+GR+  A E+FRS+ +  +  +   Y  ++H      
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 355 KMDKARDLFLDM 366
           +M+ A  +   M
Sbjct: 455 RMEDAMKILKQM 466



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 142/298 (47%), Gaps = 41/298 (13%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F  +   G  PN   Y  L++G  +      A+ + ++M   N       KP+ 
Sbjct: 422 IEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECN------IKPDL 475

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y +II G C +  +++ K +  +MK   I+ N V   ++I  +  A   ++A   F E
Sbjct: 476 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 535

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D GV+  +V++ V+++ LC+ G ++ A      M+ +G++PN  VY +L+DG C    
Sbjct: 536 MQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNC 595

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------------------ 222
           +  A++LF  M+  G   ++ +++ LI+G  K+  ++ AL L                  
Sbjct: 596 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTS 655

Query: 223 -----------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
                            ++EM+ KGI P+ V+   L    ++  Q++ A +L +EM+R
Sbjct: 656 LVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEMER 713



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 97/194 (50%), Gaps = 6/194 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F +++  G E  + TY  LI+GLC  G   +A++ F  M        +  +PN  
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRM------LSLGLQPNVA 581

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT++IDGLC    ++ AK+LF +M+   + P++  + +LI G     +  EA  L   M
Sbjct: 582 VYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 641

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  ++ ++  +  +++   + G++ +A +    MI+ G+ P   +   L+  +   G++
Sbjct: 642 TELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQL 701

Query: 182 NRAEELFVSMESMG 195
           + A EL   ME M 
Sbjct: 702 DEAIELKNEMERMA 715



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 58/112 (51%)

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           K F++M   G+A   + Y   ID LCK G +  +  LF  +R +    D+  YN LIDG 
Sbjct: 216 KFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGY 275

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            K G L+    LF  +     + D++TYN +I+  C   KM +A + F +M+
Sbjct: 276 GKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMK 327


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/403 (32%), Positives = 202/403 (50%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + ++  G  PN  TYN L+ G CR G    A  + E M   N        P   
Sbjct: 266 EARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNN------LLPTVW 319

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++G C +G +D+A  +  +M+  N+ P+VVTYN+LI G     D +E   L  EM
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ N V++N+I+  +CK G M EA+  L+ M + G+ P+   YNTL+  +C  G++
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439

Query: 182 NRAEELFVSMESMGCKHNVF-----------------------------------SYSIL 206
            +A  +   M S G K + +                                   SY IL
Sbjct: 440 GKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGIL 499

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I GY K+++ + AL+L+ EM  + I P  + YN++  GL +  +V++A    +EM  +G+
Sbjct: 500 ILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGL 559

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y   I G C  G + +A +    +    ++ D+   N L+ GLC+ G L+ A +
Sbjct: 560 VPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALK 619

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF +L       DVVTYN +I +LC +GK + A DL  +MEAK
Sbjct: 620 LFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAK 662



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 185/382 (48%), Gaps = 41/382 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  PN  ++N LI G C       AL+   +M+    EFG  C P+TV+Y TI+D L K
Sbjct: 207 LGVVPNTNSFNILIYGYCLESKVKDALDWVNKMS----EFG--CVPDTVSYNTILDALLK 260

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              + +A++L L MK + ++PN  TYN L+ G+C      EA  +   M    + P V +
Sbjct: 261 RRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWT 320

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N+++N  C +GK+DEA R+ + M ++ V P+   YNTL+DG       +    L   M+
Sbjct: 321 YNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMD 380

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G K N  +Y+I++   CK   +  A +   +M   G+ PD V YNTL     +  ++ 
Sbjct: 381 KKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMG 440

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLC----------------KNGYIVE-------- 288
           +AF++ DEM   G+  DTW   T +  LC                K GYI++        
Sbjct: 441 KAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILI 500

Query: 289 -----------AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
                      A+ L+  ++  +       YN +I GLC+S ++  A +    +    L+
Sbjct: 501 LGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLV 560

Query: 338 ADVVTYNIMIHALCADGKMDKA 359
            D  TYNI+IH  C +G ++KA
Sbjct: 561 PDETTYNIIIHGFCLEGNVEKA 582



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 188/367 (51%), Gaps = 3/367 (0%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F K++     PN+ T NTL+N L R   +   L L  ++   + + GVV  PNT +
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSIL-LARQVLKDSIKLGVV--PNTNS 215

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I G C E  V  A +   KM +    P+ V+YN+++          EA+ L ++M 
Sbjct: 216 FNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMK 275

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN  ++N+++   C+ G + EA++++E+M +  + P  + YN L++GFC  G+++
Sbjct: 276 SKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKID 335

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   ME M    +V +Y+ LI+G  + ++     SL  EM  KG+K + V YN + 
Sbjct: 336 EAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIIL 395

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             + +   +  A    D+M+ +G++ D   Y T I   CK G + +A  +   +     +
Sbjct: 396 KWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLK 455

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           +D    N ++  LC   +L  A+ L  S  +   I D V+Y I+I     D K D+A +L
Sbjct: 456 IDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNL 515

Query: 363 FLDMEAK 369
           + +M+ +
Sbjct: 516 WDEMKER 522



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 183/408 (44%), Gaps = 64/408 (15%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNTLI+G  +   +    +L EEM     + GV C  N VTY  I+  +CK+G +
Sbjct: 351 PDVVTYNTLIDGCSQWRDSSEVYSLIEEM----DKKGVKC--NAVTYNIILKWMCKKGNM 404

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A     KM++  ++P+ VTYN+LI  +C A    +A  +  EM  +G++ +  + N I
Sbjct: 405 TEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTI 464

Query: 137 MNELCKNGKMDEASRLL-----------------------------------ELMIQIGV 161
           ++ LC   K+DEA  LL                                   + M +  +
Sbjct: 465 LHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQI 524

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   YN+++ G C + +V++A +    M   G   +  +Y+I+I+G+C    +E A  
Sbjct: 525 MPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQ 584

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            ++EM+    KPDV   N L  GL     +E+A KLF+ +   G   D   Y T I  LC
Sbjct: 585 FHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLC 644

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL---------- 331
           K G    A +L   +   K   D   Y  +I  L  +GR+K A E    +          
Sbjct: 645 KEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQN 704

Query: 332 -----PRGVLIADV--------VTYNIMIHALCADGKMDKARDLFLDM 366
                 + VL ++V        + Y+  I+ LC   K   A  LF+++
Sbjct: 705 LKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEV 752



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/371 (28%), Positives = 174/371 (46%), Gaps = 34/371 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+   G  P+  TYNTLI   C+ G    A  + +EM +         K +T 
Sbjct: 406 EATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKG------LKIDTW 459

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T  TI+  LC E  +D+A  L           + V+Y  LI G+      + A  L+ EM
Sbjct: 460 TLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEM 519

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + P+ +++N ++  LC++ K+D+A   L  M++ G+ P+   YN ++ GFCL G V
Sbjct: 520 KERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNV 579

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +    M     K +V++ +IL+ G C+   +E AL L++ ++SKG   DVV YNT+
Sbjct: 580 EKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTI 639

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK- 300
              L +  + E A+ L  EM+   +  D + Y+  I  L   G I EA E   TL++++ 
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEF--TLKMVES 697

Query: 301 ------------------------YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR-GV 335
                                   ++    AY+  I+ LC   + K A  LF  + + GV
Sbjct: 698 GIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHLFVEVTKEGV 757

Query: 336 LIADVVTYNIM 346
            +      N+M
Sbjct: 758 ALNKYTYLNLM 768



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 128/266 (48%), Gaps = 18/266 (6%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TYN++I GLC++     A++   EM     E G+V  P+  TY  II G C EG V
Sbjct: 526 PSTITYNSVIGGLCQSRKVDQAIDKLNEML----ENGLV--PDETTYNIIIHGFCLEGNV 579

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           +KA +   +M +    P+V T N L+ G C      +A  LF  ++ +G   +VV++N I
Sbjct: 580 EKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTI 639

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK GK + A  LL  M    + P+ + Y  ++      GR+  AEE  + M   G 
Sbjct: 640 ISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGI 699

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
            H+            +N ++    ++ +  +S+      + Y+     L   H+ + A  
Sbjct: 700 VHD------------QNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMH 747

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCK 282
           LF E+ + GVA + + Y   ++GL K
Sbjct: 748 LFVEVTKEGVALNKYTYLNLMEGLIK 773



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 29/225 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYN +I+G C  G+   A     EM         + KP+  T   ++ GLC+E
Sbjct: 558 GLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIEN------LFKPDVYTCNILLRGLCRE 611

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++KA +LF  +  +  + +VVTYN++I   C    +  A  L  EM  + + P+  ++
Sbjct: 612 GMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTY 671

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPN-----------------------AFVYNT 170
            VI+  L   G++ EA      M++ G+  +                       +  Y+ 
Sbjct: 672 KVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSD 731

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
            ++  C   +   A  LFV +   G   N ++Y  L+ G  K ++
Sbjct: 732 QINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 80/174 (45%), Gaps = 30/174 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  L   G + +V TYNT+I+ LC+ G    A +L  EM     + G    P+  
Sbjct: 616 KALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAK--KLG----PDQY 669

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM------KDENIN----PNVVT-------------Y 98
           TY  II  L   G + +A+E  LKM       D+N+      NV+T             Y
Sbjct: 670 TYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAY 729

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK-MDEASR 151
           +  I+  C  + + +A  LF+E+  +GV  N  ++  +M  L K  K   +ASR
Sbjct: 730 SDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRKSTSKASR 783


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/405 (31%), Positives = 203/405 (50%), Gaps = 44/405 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +R  G   +V TY TLI GLC       A+ L  EM     E G+  +PN V
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC----ESGI--EPNVV 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y++++ G CK G  +   ++F++M ++ I P+VV Y  LI   C      +A  +   M
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNG-----------------------------------KM 146
           + +G++PNVV++NV++N +CK G                                   +M
Sbjct: 247 VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEM 306

Query: 147 DEASRLLELMIQIG--VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           DEA  LLE M++    V+PN   +N+++ G C  GR+ +A ++   ME  GC  N+ +Y+
Sbjct: 307 DEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +LI G  +  ++  A+ L  EM S G++PD   Y+ L  G  ++ QV+RA  L   M+  
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+  + + Y   +  +C+ G +  A  LF  +    + LD+ AY+ +I G CK+G LK A
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            EL +S+    L  D VTY+I+I+     G M+ A  +   M A 
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTAS 530



 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 188/354 (53%), Gaps = 5/354 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  +YNT++  LCR GH   A  L   M+    E    C+PN V+YT ++  LC +   D
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRPNAVSYTVLMRALCADRLAD 132

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  L   M+   +  +VVTY +LI G C A + ++A  L  EM + G++PNVV ++ ++
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
              CK+G+ ++  ++   M + G+ P+  +Y  L+D  C  G+  +A  +   M   G +
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +Y++LIN  CK   ++ A+ +  +M  KG+ PDVV YNTL  GL ++ +++ A  L
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 258 FDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +EM R    V  +   + + I GLC  G + +A ++   +      +++  YN LI GL
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  +++ A EL   +    L  D  TY+I+I   C   ++D+A DL   M  +
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 195/370 (52%), Gaps = 9/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +   +F+++   G EP+V  Y  LI+ LC+ G    A  + + M     E      PN V
Sbjct: 203 DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE------PNVV 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+ +CKEG V +A  +  KM ++ + P+VVTYN+LI G     + +EA  L  EM
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 122 MDQG--VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +     V+PNVV+FN ++  LC  G+M +A ++  +M + G   N   YN L+ G     
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V +A EL   M S+G + + F+YSILI G+CK  +++ A  L S M  +GI+P++  Y 
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L + + E   +ERA  LF+EM  +    D  AY T I G CK G +  A EL +++   
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   Y+ +I+   KSG ++ A  + + +     + DV  ++ +I      G+++K 
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 360 RDLFLDMEAK 369
            +L  +M  K
Sbjct: 556 LELIREMITK 565



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 159/331 (48%), Gaps = 8/331 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G  P+V TYNTLI GL        A+ L EEM  G      + KPN V
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKN----IVKPNVV 328

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++I GLC  G + +A ++   M++     N+VTYN LI G    +   +A  L  EM
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++P+  ++++++   CK  ++D A  LL  M   G+ P  F Y  L+   C  G +
Sbjct: 389 TSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMM 448

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA  LF  M++     +V +YS +I+G CK  +++ A  L   ++ +G+ PD V Y+ +
Sbjct: 449 ERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIV 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +   +E A  +  +M   G   D   + + I G    G I + +EL R +     
Sbjct: 508 INMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            LD +  + L   L  S   K    L +SLP
Sbjct: 568 ALDSKIISTLSTSLVASNEGK---ALLQSLP 595



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 6/227 (2%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME---SMGCKHNVFS 202
           + EA+ LL+ +  +    +A  YNT++   C  G  +RA  L  +M       C+ N  S
Sbjct: 61  LGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y++L+   C ++  + A+ L   M S G++ DVV Y TL  GL +  +V++A +L  EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G+  +   Y + + G CK+G   +  ++F  +     E D+  Y  LID LCK G+ K
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  +   + R  L  +VVTYN++I+ +C +G + +A  +   M  K
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK 284


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 173/323 (53%), Gaps = 29/323 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGV-V 55
           EA  +F  +   G +P++ TY TL++G    G     H ++AL +   M   +  F + +
Sbjct: 130 EARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILI 189

Query: 56  C-----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           C                        PN V Y T+IDGLCK G +D A   F +M D+ + 
Sbjct: 190 CAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLT 249

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVV Y SLIH  C  + W +A+ L  E++DQG+ PN+V FN I++ LCK G++ E+ +L
Sbjct: 250 PNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKL 309

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            +L+  IGV P+   Y+TL+DG+CL G+++ A +L   M S+G K +  +YS LINGYCK
Sbjct: 310 FDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCK 369

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E AL+L+ EM S G+ PD++ YN +  GLF   +   A +L+  +   G   +   
Sbjct: 370 INRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELST 429

Query: 273 YRTFIDGLCKNGYIVEAVELFRT 295
           Y   +    K   ++     FRT
Sbjct: 430 YNIILMDFAKTNSLMMHFGCFRT 452



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 185/347 (53%), Gaps = 6/347 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN FTYN++++G C +G +  A+ +F +M +   E      P+ VTY +++D LCK G  
Sbjct: 75  PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIE------PDVVTYNSLMDYLCKNGKC 128

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+++F  M    + P++ TY +L+HG+       E   L   M+  G+Q +   FN++
Sbjct: 129 TEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNIL 188

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    K  K+DE   +   M Q G+ PNA  Y T++DG C  GR++ A   F  M   G 
Sbjct: 189 ICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGL 248

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV  Y+ LI+  C   + E A  L  E+L +GI P++V +NT+   L +  +V  + K
Sbjct: 249 TPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKK 308

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LFD +   GV  D   Y T IDG C  G +  A++L   +  +  + D   Y+ LI+G C
Sbjct: 309 LFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYC 368

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K  R++ A  LF+ +    +  D++TYNI++H L    +   A++L+
Sbjct: 369 KINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELY 415



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 192/379 (50%), Gaps = 25/379 (6%)

Query: 15  CEPNVFTYNTLINGLCRTGHT-------------------------IVALNLFEEMANGN 49
           C P+V +YNT+I+GL + G                           I AL+  + M    
Sbjct: 7   CPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAM 66

Query: 50  GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
               V+  PN  TY +I+ G C  G  +KA  +F KM  + I P+VVTYNSL+   C   
Sbjct: 67  EVLTVMVMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNG 126

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
              EA+ +F  M+ +G++P++ ++  +++     G + E   LL LM+Q G++ +  V+N
Sbjct: 127 KCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFN 186

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L+  +    +V+    +F  M   G   N  +Y  +I+G CK   ++ A+  + +M+ K
Sbjct: 187 ILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDK 246

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G+ P+VV+Y +L   L    + E+A +L  E+   G+  +   + T +D LCK G ++E+
Sbjct: 247 GLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIES 306

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            +LF  L  +    D+  Y+ LIDG C +G++  A +L   +    L  D VTY+ +I+ 
Sbjct: 307 KKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLING 366

Query: 350 LCADGKMDKARDLFLDMEA 368
            C   +M+ A  LF +ME+
Sbjct: 367 YCKINRMEDALALFKEMES 385



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 143/279 (51%), Gaps = 4/279 (1%)

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
           D    P+VV+YN++I G     D ++A   + EM+D+ V P+ V++N I+  L K   MD
Sbjct: 4   DGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMD 63

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
            A  +L +M    V PN F YN++M G+C +G+  +A  +F  M S G + +V +Y+ L+
Sbjct: 64  RAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLM 119

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +  CKN +   A  ++  M+ +G+KPD+  Y TL  G      +     L   M ++G+ 
Sbjct: 120 DYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQ 179

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   +   I    K   + E V +F  +R      +   Y  +IDGLCK GRL  A   
Sbjct: 180 LDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLN 239

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           F  +    L  +VV Y  +IHALC   K +KA +L  ++
Sbjct: 240 FEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEI 278



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 6/146 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E+  LF  L   G  P+V TY+TLI+G C  G    A+ L        G   V  KP++
Sbjct: 304 IESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLL------TGMVSVGLKPDS 357

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+I+G CK   ++ A  LF +M+   +NP+++TYN ++HG         AK L+  
Sbjct: 358 VTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYAR 417

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKM 146
           + + G Q  + ++N+I+ +  K   +
Sbjct: 418 ITESGTQLELSTYNIILMDFAKTNSL 443


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 189/351 (53%), Gaps = 9/351 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           +G  P V  YN LIN  C+ G    A  +F E+           +P TV++ T+I+GLCK
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG------LRPTTVSFNTLINGLCK 270

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +D+   L   M++  I P+V TY+ LIHG C     + A+ LF EM  +G++PN ++
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F  +++  C++ ++D A      M+ +GV+P+  +YNTL++G C  G VN+A +L   M 
Sbjct: 331 FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMR 390

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            +G K +  +Y+ LI+GYCK  ++E A+ +   M  +G+  D V +  L  G     +V 
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +   EM   G+  D   Y   IDG CK G +    +L + ++I  ++  +  YN L+
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +GLCK G++K A  L  ++    +  D +TYNI++   C +G   KA DL 
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLL 558



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 100/275 (36%), Positives = 158/275 (57%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P V  YN LI+ FC      +AK +F E+  +G++P  VSFN ++N LCK+  +DE  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M +  + P+ F Y+ L+ G C  GR++ AE+LF  M+  G + N  +++ LI+G C+
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           ++ I+ A++ Y +ML+ G+KPD+V+YNTL  GL ++  V +A KL DEM+  G+  D   
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T IDG CK G +  A+E+ + +      LD  A+  LI G C+ GR++ A    R + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +  D  TY ++I   C  G +     L  +M+
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/346 (31%), Positives = 183/346 (52%), Gaps = 9/346 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G  P   ++NTLINGLC++ +      L + M            P+  
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR------IYPDVF 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I GLCKEG +D A++LF +M+   + PN +T+ +LI G C +   + A   + +M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+P++V +N ++N LCK G +++A +L++ M  +G++P+   Y TL+DG+C  G +
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+   M   G   +  +++ LI+G+C++  +  A     EM+  G+KPD   Y  +
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V+  FKL  EMQ +G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
             D   YN L++G CK+G+   A +L +      LI D   Y  ++
Sbjct: 535 TPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLV 577



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 35/263 (13%)

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF-------VSME 192
           + + GK   AS    ++   G R + FV++ LM  +  +G V+ A + F         + 
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIP 187

Query: 193 SMGCKH----------------------------NVFSYSILINGYCKNKEIEGALSLYS 224
             GC +                             V  Y+ILIN +CK   I  A  +++
Sbjct: 188 FHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFN 247

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E+  +G++P  V +NTL  GL +   ++  F+L   M+ + +  D + Y   I GLCK G
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEG 307

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +  A +LF  ++      +   +  LIDG C+S R+  A   +  +    +  D+V YN
Sbjct: 308 RLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYN 367

Query: 345 IMIHALCADGKMDKARDLFLDME 367
            +++ LC  G ++KAR L  +M 
Sbjct: 368 TLLNGLCKVGDVNKARKLVDEMR 390


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/368 (34%), Positives = 199/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F+ +R     PN FTY +LI+  C+ G+   AL L EE+           K N V
Sbjct: 378 EAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAG------IKLNVV 431

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGLC+EG + +A+E+F  M +  + PN  TY +L+HGF  A +   AK +  EM
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ ++P+++ +  I+  LC   +++EA  L+  + + G+  NA +Y TLMD +  +G+ 
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M  +G      +Y  LI+G CK+  ++ A+  +  M   G++P+V +Y  L
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + +  E A KLFDEM   G+  D  AY   IDG  K+G + EA+ L   +  +  
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 671

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           ELD+ AY  LI GL  SG+++ A  L   +    ++ D V Y  +I    A GK+D+A +
Sbjct: 672 ELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALE 731

Query: 362 LFLDMEAK 369
           L  +M  +
Sbjct: 732 LQNEMAKR 739



 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/362 (32%), Positives = 183/362 (50%), Gaps = 8/362 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           E   +F +++   C+P+V TYN LIN  C+      A     EM ANG        KPN 
Sbjct: 308 ECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG-------LKPNV 360

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T ID  CKEG + +A + F+ M+   + PN  TY SLI   C A +  EA  L  E
Sbjct: 361 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 420

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++  G++ NVV++  +++ LC+ G+M EA  +   M+  GV PN   Y  L+ GF     
Sbjct: 421 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 480

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A+++   M+    K ++  Y  ++ G C    +E A  L  E+   GI  + VIY T
Sbjct: 481 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 540

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L    F+  Q   A  L +EM   G+ A    Y   IDGLCK+G + EA+  F  +  + 
Sbjct: 541 LMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIG 600

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + ++  Y  L+DGLCK+   ++A +LF  +    ++ D + Y  +I      G + +A 
Sbjct: 601 LQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEAL 660

Query: 361 DL 362
           +L
Sbjct: 661 NL 662



 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 199/396 (50%), Gaps = 41/396 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
            F  +   G + +VFTYN +I+ LC+ G   +A +LF +M     E G    P+ VTY +
Sbjct: 242 FFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMK----EAGFT--PDIVTYNS 295

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG  K G +D+   +F +MKD + +P+V+TYN+LI+ FC      +A     EM   G
Sbjct: 296 LIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG 355

Query: 126 VQPNVVSFNVIMNELCKNGKMDEAS----------------------------------- 150
           ++PNVV+++  ++  CK G + EA                                    
Sbjct: 356 LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEAL 415

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +L+E ++Q G++ N   Y  L+DG C  GR+  AEE+F +M + G   N  +Y+ L++G+
Sbjct: 416 KLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGF 475

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K KE+E A  +  EM  K IKPD+++Y T+  GL    ++E A  L  E++  G+  + 
Sbjct: 476 IKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 535

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y T +D   K+G   EA+ L   +  L        Y  LIDGLCKSG ++ A   F  
Sbjct: 536 VIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGR 595

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    L  +V  Y  ++  LC +   + A+ LF +M
Sbjct: 596 MSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEM 631



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+  F+K+R F   P   + N L++ L + G   ++   F++M    G  G+  K +  
Sbjct: 203 EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM----GAAGI--KRSVF 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LCKEG ++ A+ LF +MK+    P++VTYNSLI G       +E  C+F +M
Sbjct: 257 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+V+++N ++N  CK  +M +A   L  M   G++PN   Y+T +D FC  G +
Sbjct: 317 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 376

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A + FV M  +    N F+Y+ LI+  CK   +  AL L  E+L  GIK +VV Y  L
Sbjct: 377 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 436

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL E  +++ A ++F  M   GVA +   Y   + G  K   +  A ++ + ++    
Sbjct: 437 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 496

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y  ++ GLC   RL+ A  L   +    +  + V Y  ++ A    G+  +A  
Sbjct: 497 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 556

Query: 362 LFLDM 366
           L  +M
Sbjct: 557 LLEEM 561



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 167/315 (53%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VC P    +  +   L + G +++A E FLKM+   + P   + N+L+H        + +
Sbjct: 180 VCVPGFGVFDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLS 239

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           +  F +M   G++ +V ++N++++ LCK G ++ A  L   M + G  P+   YN+L+DG
Sbjct: 240 RKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDG 299

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
               G ++    +F  M+   C  +V +Y+ LIN +CK + +  A     EM + G+KP+
Sbjct: 300 HGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPN 359

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+T      +   ++ A K F +M+R  +  + + Y + ID  CK G + EA++L  
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +     +L++  Y  L+DGLC+ GR+K A E+FR++    +  +  TY  ++H      
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 355 KMDKARDLFLDMEAK 369
           +M+ A+D+  +M+ K
Sbjct: 480 EMEYAKDILKEMKEK 494



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 140/300 (46%), Gaps = 41/300 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G  PN  TY  L++G  +      A ++ +EM           KP+ +
Sbjct: 448 EAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK------CIKPDLL 501

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TI+ GLC E  +++AK L  ++K+  IN N V Y +L+  +  +    EA  L  EM
Sbjct: 502 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 561

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+    V++  +++ LCK+G + EA      M +IG++PN  VY  L+DG C     
Sbjct: 562 LDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCF 621

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------------------- 222
             A++LF  M   G   +  +Y+ LI+G  K+  ++ AL+L                   
Sbjct: 622 EVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTAL 681

Query: 223 ----------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                             EM+ KG+ PD V+Y  L    + + +V+ A +L +EM + G+
Sbjct: 682 IWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 196/397 (49%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           +A  LF  +   G  PNV TYN LI+GLC+ G+   A    E+M                
Sbjct: 264 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 323

Query: 49  NG--------EFGVVCK--------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           NG        E   V K        PN V Y T+IDG CK G +  A  +   M  + IN
Sbjct: 324 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 383

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN VT NS+I GFC      +A+C+  EM+ +G   N  +F  I++ LC N + + A R 
Sbjct: 384 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 443

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M+   +RPN  +  TL+ G C  G+ + A EL+  +   G   N+ + + LI+G CK
Sbjct: 444 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 503

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A+ L  +ML +G   D + YNTL  G  +  +VE  FKL  EM + G+  DT+ 
Sbjct: 504 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 563

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I G+C+ G + EAV L+   +      ++  Y  +IDG CK+ +++   +LF  L 
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              L  + V YN +I A C +G   +A  L  DM +K
Sbjct: 624 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK 660



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 193/356 (54%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V+ ++T IN  C+ G    A+ LF +M     + GV   PN VTY  +I GLCK 
Sbjct: 241 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME----KLGV--SPNVVTYNNLIHGLCKH 294

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A     KM  + +N  ++TY+ LI+G      +NEA  +  E +++G  PN V +
Sbjct: 295 GNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVY 354

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK G + +A R+   M+  G+ PN+   N+++ GFC  G++ +AE +   M S
Sbjct: 355 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 414

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +++ +I+  C N   E AL    EML + ++P+  +  TL  GL +  +   
Sbjct: 415 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSD 474

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G  A+       I GLCK G + EAV L + +    + LD   YN LI 
Sbjct: 475 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 534

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G CK G+++  ++L   + +  +  D  TYN++IH +C  GK+D+A +L+ + +++
Sbjct: 535 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 590



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 185/362 (51%), Gaps = 8/362 (2%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M  R F   P  FT  T+I+ LC       AL    EM   N       +PN    TT++
Sbjct: 412 MLSRGFSINPGAFT--TIIHWLCMNSRFESALRFLREMLLRN------MRPNDGLLTTLV 463

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GLCKEG    A EL+ ++ ++    N+VT N+LIHG C   +  EA  L  +M+++G  
Sbjct: 464 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 523

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
            + +++N +++  CK GK++E  +L   M++ G+ P+ F YN L+ G C  G+++ A  L
Sbjct: 524 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 583

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           +   +S     NV++Y ++I+GYCK  +IE    L++E+L++ ++ + V+YNTL      
Sbjct: 584 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 643

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
                 AFKL D+M+  G+   T  Y + I G+C  G + +A  L   +R      ++  
Sbjct: 644 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 703

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y  LI G CK G++     + + +    +  + +TY +MI      G M  A  L  +M 
Sbjct: 704 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 763

Query: 368 AK 369
            K
Sbjct: 764 GK 765



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 183/360 (50%), Gaps = 9/360 (2%)

Query: 2   EAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPN 59
           E+A  F++ + +    PN     TL+ GLC+ G    A+ L F  +  G G        N
Sbjct: 438 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA-------N 490

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VT   +I GLCK G + +A  L  KM +     + +TYN+LI G C      E   L  
Sbjct: 491 LVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG 550

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ QG++P+  ++N++++ +C+ GK+DEA  L        + PN + Y  ++DG+C   
Sbjct: 551 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 610

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++   E+LF  + +   + N   Y+ LI  YC+N     A  L+ +M SKGI P    Y+
Sbjct: 611 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 670

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  G+  I ++E A  L DEM++ G+  +   Y   I G CK G + + V + + +   
Sbjct: 671 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 730

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +   Y  +IDG  KSG +K A +L   +    ++ D VTYN++ +  C +GK+++ 
Sbjct: 731 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 790



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 179/348 (51%), Gaps = 6/348 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ +L   G   N+ T N LI+GLC+TG+   A+ L ++M     E G V   + +
Sbjct: 474 DAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKML----ERGFVL--DKI 527

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I G CKEG V++  +L  +M  + I P+  TYN LIHG C     +EA  L+ E 
Sbjct: 528 TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNEC 587

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV ++ V+++  CK  K++E  +L   ++   +  N+ VYNTL+  +C  G  
Sbjct: 588 KSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNT 647

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M S G      +YS LI+G C    +E A  L  EM  +G+ P+VV Y  L
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTAL 707

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ Q+++   +  EM  + +  +   Y   IDG  K+G +  A +L   +     
Sbjct: 708 IGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGI 767

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
             D   YN L +G CK G+++  +++   + +  L  D +TY  ++H 
Sbjct: 768 VPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 181/355 (50%), Gaps = 6/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  T N++I G C+ G    A  + EEM +    F +    N   +TTII  LC  
Sbjct: 381 GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG--FSI----NPGAFTTIIHWLCMN 434

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              + A     +M   N+ PN     +L+ G C     ++A  L+  ++++G   N+V+ 
Sbjct: 435 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 494

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK G M EA RLL+ M++ G   +   YNTL+ G C  G+V    +L   M  
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + + F+Y++LI+G C+  +++ A++L++E  S+ + P+V  Y  +  G  +  ++E 
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             KLF E+    +  ++  Y T I   C+NG  VEA +L   +R          Y+ LI 
Sbjct: 615 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 674

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           G+C  GR++ A  L   + +  L+ +VV Y  +I   C  G+MDK  ++  +M +
Sbjct: 675 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 729



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 170/330 (51%), Gaps = 9/330 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A+ +F  +AN  G F     P   T T ++  L K   ++K+  +F  M+ + ++P+V  
Sbjct: 196 AIGVFRFLAN-KGVF-----PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYL 248

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +++ I+ FC      +A  LF +M   GV PNVV++N +++ LCK+G +DEA R  E M+
Sbjct: 249 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 308

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + GV      Y+ L++G     + N A  +       G   N   Y+ LI+GYCK   + 
Sbjct: 309 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 368

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL +  +M+SKGI P+ V  N++  G  +I Q+E+A  + +EM   G + +  A+ T I
Sbjct: 369 DALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 428

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL-FRSLPRGVL 336
             LC N     A+   R + +     +      L+ GLCK G+   A EL FR L +G  
Sbjct: 429 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG-F 487

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A++VT N +IH LC  G M +A  L   M
Sbjct: 488 GANLVTTNALIHGLCKTGNMQEAVRLLKKM 517



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 110/209 (52%), Gaps = 6/209 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF +L     E N   YNTLI   CR G+T+ A  L ++M +          P T 
Sbjct: 614 EGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG------IPPTTA 667

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I G+C  G ++ AK L  +M+ E + PNVV Y +LI G+C     ++   +  EM
Sbjct: 668 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 727

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN +++ V+++   K+G M  A++LL  M+  G+ P+   YN L +GFC  G++
Sbjct: 728 SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKI 787

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGY 210
               ++   M   G   +  +Y+ L++G+
Sbjct: 788 EEGFKICDYMSQEGLPLDEITYTTLVHGW 816



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 97/175 (55%), Gaps = 6/175 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +R  G  P   TY++LI+G+C  G    A  L +EM     + G++  PN 
Sbjct: 648 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR----KEGLL--PNV 701

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT +I G CK G +DK   +  +M   +I+PN +TY  +I G+  + D   A  L  E
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
           M+ +G+ P+ V++NV+ N  CK GK++E  ++ + M Q G+  +   Y TL+ G+
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 194/388 (50%), Gaps = 29/388 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN----------- 49
           +EA ALF++++  GC P+V TYN+LI+G  + G       L  EM               
Sbjct: 216 VEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNAL 275

Query: 50  ----GEFGVVCKP--------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                +FG + K               N VT +T +D  CKEG V +A +LF +M+   +
Sbjct: 276 INCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGM 335

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            PN  TY SL+ G C A   ++A  L  EM+ QG+ PNVV++ V+++ LCK GK+  A  
Sbjct: 336 MPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADD 395

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +L LM + GV+ N  +Y TL+ G  +     RA +L   M++ G + +V  Y  LI G C
Sbjct: 396 VLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLC 455

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K ++++ A SL  +M   G++P+ VIY T+    F+  +   A  L  ++   G+  +  
Sbjct: 456 KVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVV 515

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   IDGLCK G I EA+  F  +R L  + +++ Y  LIDG CK G L  A  L   +
Sbjct: 516 TYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEM 575

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  D V Y  +I      G +  A
Sbjct: 576 VDKGMSLDKVVYTSLIDGHMKQGDLQGA 603



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/367 (34%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++RV G  PN FTY +L++G C+ G    A+ L +EM +     G+V  PN V
Sbjct: 322 EAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQ----GLV--PNVV 375

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGLCKEG V  A ++   M+   +  N + Y +LIHG     +   A  L  EM
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ +V  +  ++  LCK  K+DEA  LL  M   G+RPN  +Y T+MD F   G+ 
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKE 495

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   +   G + NV +Y  LI+G CK   I  A+S + +M   G+ P+V +Y TL
Sbjct: 496 SEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTL 555

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +I  + +A  L +EM   G++ D   Y + IDG  K G +  A  L   +     
Sbjct: 556 IDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGL 615

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LD+  Y C I G C    ++ A  +   +    +  D   YN +I      G M++A  
Sbjct: 616 QLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASS 675

Query: 362 LFLDMEA 368
           L  +ME+
Sbjct: 676 LQNEMES 682



 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 176/362 (48%), Gaps = 10/362 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     ++R     PN  T N ++  L R     +   LFE +            PN  
Sbjct: 151 DAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHLP----------APNVF 200

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID LCK+G + +A+ LF++MK    +P+VVTYNSLI G+    +  E + L  EM
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   +VV++N ++N   K G +++A      M ++GV  N    +T +D FC  G V
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLV 320

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M   G   N F+Y+ L++G CK   ++ A+ L  EM+ +G+ P+VV Y  +
Sbjct: 321 REAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 380

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V  A  +   M+R GV A+   Y T I G   N     A++L   ++    
Sbjct: 381 VDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGM 440

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           ELD+  Y  LI GLCK  +L  A  L   +    L  + V Y  ++ A    GK  +A  
Sbjct: 441 ELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVA 500

Query: 362 LF 363
           L 
Sbjct: 501 LL 502



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 135/271 (49%), Gaps = 33/271 (12%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA---------------------- 165
           P+V  F+ +++ L  +G +D+A R L  + Q+ V PN                       
Sbjct: 133 PSV--FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 190

Query: 166 ---------FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
                    F +N ++D  C  G +  A  LFV M++MGC  +V +Y+ LI+GY K  E+
Sbjct: 191 FEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGEL 250

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E    L SEM   G   DVV YN L     +   +E+A+  F EM+R GV A+     TF
Sbjct: 251 EEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTF 310

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +D  CK G + EA++LF  +R+     +   Y  L+DG CK+GRL  A  L   +    L
Sbjct: 311 VDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 370

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + +VVTY +M+  LC +GK+  A D+   ME
Sbjct: 371 VPNVVTYTVMVDGLCKEGKVAVADDVLSLME 401



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 4/310 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PNT T   I+  L +       + LF  +      PNV T+N +I   C   +  EA+ L
Sbjct: 166 PNTRTCNHILLRLARNRQGGLVRRLFEHLP----APNVFTFNIVIDFLCKQGELVEARAL 221

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F+ M   G  P+VV++N +++   K G+++E   L+  M + G   +   YN L++ F  
Sbjct: 222 FVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSK 281

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G + +A   F  M+ +G   NV + S  ++ +CK   +  A+ L+++M  +G+ P+   
Sbjct: 282 FGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFT 341

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y +L  G  +  +++ A  L DEM   G+  +   Y   +DGLCK G +  A ++   + 
Sbjct: 342 YTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLME 401

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + +   Y  LI G   +   + A +L   +    +  DV  Y  +I  LC   K+D
Sbjct: 402 RAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLD 461

Query: 358 KARDLFLDME 367
           +A+ L   M+
Sbjct: 462 EAKSLLHKMD 471



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/193 (35%), Positives = 100/193 (51%), Gaps = 6/193 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  K+   G +PNV TY  LI+GLC+ G    A++ F++M     E G+   PN  
Sbjct: 497 EAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMR----ELGL--DPNVQ 550

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTT+IDG CK G + KA  L  +M D+ ++ + V Y SLI G     D   A  L  +M
Sbjct: 551 VYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKM 610

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G+Q ++  +   ++  C    M EA  +L  MI  G+ P+   YN L+  +   G +
Sbjct: 611 IETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNM 670

Query: 182 NRAEELFVSMESM 194
             A  L   MES+
Sbjct: 671 EEASSLQNEMESV 683



 Score = 47.0 bits (110), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 10/126 (7%)

Query: 249 HQVERAFKLFDEMQRHGVA------ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
           H+   A  L D + R  +A      A    + T +  L  +G + +AV     +R L+  
Sbjct: 106 HRPHLAASLVDILHRAALALGPHRSALPSVFDTLLSLLADHGLLDDAVRALARVRQLRVP 165

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            + R  N ++  L ++ +  +   LF  LP      +V T+NI+I  LC  G++ +AR L
Sbjct: 166 PNTRTCNHILLRLARNRQGGLVRRLFEHLP----APNVFTFNIVIDFLCKQGELVEARAL 221

Query: 363 FLDMEA 368
           F+ M+A
Sbjct: 222 FVRMKA 227


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/397 (33%), Positives = 196/397 (49%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           +A  LF  +   G  PNV TYN LI+GLC+ G+   A    E+M                
Sbjct: 331 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 390

Query: 49  NG--------EFGVVCK--------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           NG        E   V K        PN V Y T+IDG CK G +  A  +   M  + IN
Sbjct: 391 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGIN 450

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN VT NS+I GFC      +A+C+  EM+ +G   N  +F  I++ LC N + + A R 
Sbjct: 451 PNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRF 510

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M+   +RPN  +  TL+ G C  G+ + A EL+  +   G   N+ + + LI+G CK
Sbjct: 511 LREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCK 570

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A+ L  +ML +G   D + YNTL  G  +  +VE  FKL  EM + G+  DT+ 
Sbjct: 571 TGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFT 630

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I G+C+ G + EAV L+   +      ++  Y  +IDG CK+ +++   +LF  L 
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              L  + V YN +I A C +G   +A  L  DM +K
Sbjct: 691 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK 727



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 193/356 (54%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V+ ++T IN  C+ G    A+ LF +M     + GV   PN VTY  +I GLCK 
Sbjct: 308 GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDME----KLGV--SPNVVTYNNLIHGLCKH 361

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A     KM  + +N  ++TY+ LI+G      +NEA  +  E +++G  PN V +
Sbjct: 362 GNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVY 421

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK G + +A R+   M+  G+ PN+   N+++ GFC  G++ +AE +   M S
Sbjct: 422 NTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLS 481

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +++ +I+  C N   E AL    EML + ++P+  +  TL  GL +  +   
Sbjct: 482 RGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSD 541

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G  A+       I GLCK G + EAV L + +    + LD   YN LI 
Sbjct: 542 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 601

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G CK G+++  ++L   + +  +  D  TYN++IH +C  GK+D+A +L+ + +++
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSR 657



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 185/362 (51%), Gaps = 8/362 (2%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M  R F   P  FT  T+I+ LC       AL    EM   N       +PN    TT++
Sbjct: 479 MLSRGFSINPGAFT--TIIHWLCMNSRFESALRFLREMLLRN------MRPNDGLLTTLV 530

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GLCKEG    A EL+ ++ ++    N+VT N+LIHG C   +  EA  L  +M+++G  
Sbjct: 531 GGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFV 590

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
            + +++N +++  CK GK++E  +L   M++ G+ P+ F YN L+ G C  G+++ A  L
Sbjct: 591 LDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNL 650

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           +   +S     NV++Y ++I+GYCK  +IE    L++E+L++ ++ + V+YNTL      
Sbjct: 651 WNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCR 710

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
                 AFKL D+M+  G+   T  Y + I G+C  G + +A  L   +R      ++  
Sbjct: 711 NGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVC 770

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y  LI G CK G++     + + +    +  + +TY +MI      G M  A  L  +M 
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830

Query: 368 AK 369
            K
Sbjct: 831 GK 832



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 186/366 (50%), Gaps = 9/366 (2%)

Query: 2   EAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPN 59
           E+A  F++ + +    PN     TL+ GLC+ G    A+ L F  +  G G        N
Sbjct: 505 ESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGA-------N 557

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VT   +I GLCK G + +A  L  KM +     + +TYN+LI G C      E   L  
Sbjct: 558 LVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRG 617

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ QG++P+  ++N++++ +C+ GK+DEA  L        + PN + Y  ++DG+C   
Sbjct: 618 EMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKAD 677

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++   E+LF  + +   + N   Y+ LI  YC+N     A  L+ +M SKGI P    Y+
Sbjct: 678 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 737

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  G+  I ++E A  L DEM++ G+  +   Y   I G CK G + + V + + +   
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +   Y  +IDG  KSG +K A +L   +    ++ D VTYN++ +  C +GK+++ 
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857

Query: 360 RDLFLD 365
           + L  D
Sbjct: 858 KLLAED 863



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 181/355 (50%), Gaps = 6/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  T N++I G C+ G    A  + EEM +    F +    N   +TTII  LC  
Sbjct: 448 GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRG--FSI----NPGAFTTIIHWLCMN 501

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              + A     +M   N+ PN     +L+ G C     ++A  L+  ++++G   N+V+ 
Sbjct: 502 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTT 561

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK G M EA RLL+ M++ G   +   YNTL+ G C  G+V    +L   M  
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + + F+Y++LI+G C+  +++ A++L++E  S+ + P+V  Y  +  G  +  ++E 
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             KLF E+    +  ++  Y T I   C+NG  VEA +L   +R          Y+ LI 
Sbjct: 682 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 741

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           G+C  GR++ A  L   + +  L+ +VV Y  +I   C  G+MDK  ++  +M +
Sbjct: 742 GMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSS 796



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 170/330 (51%), Gaps = 9/330 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A+ +F  +AN  G F     P   T T ++  L K   ++K+  +F  M+ + ++P+V  
Sbjct: 263 AIGVFRFLAN-KGVF-----PTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYL 315

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +++ I+ FC      +A  LF +M   GV PNVV++N +++ LCK+G +DEA R  E M+
Sbjct: 316 FSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMV 375

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + GV      Y+ L++G     + N A  +       G   N   Y+ LI+GYCK   + 
Sbjct: 376 KDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLG 435

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            AL +  +M+SKGI P+ V  N++  G  +I Q+E+A  + +EM   G + +  A+ T I
Sbjct: 436 DALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTII 495

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL-FRSLPRGVL 336
             LC N     A+   R + +     +      L+ GLCK G+   A EL FR L +G  
Sbjct: 496 HWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG-F 554

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A++VT N +IH LC  G M +A  L   M
Sbjct: 555 GANLVTTNALIHGLCKTGNMQEAVRLLKKM 584



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/154 (36%), Positives = 84/154 (54%), Gaps = 6/154 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +R  G  P   TY++LI+G+C  G    A  L +EM       G++  PN 
Sbjct: 715 VEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKE----GLL--PNV 768

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT +I G CK G +DK   +  +M   +I+PN +TY  +I G+  + D   A  L  E
Sbjct: 769 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           M+ +G+ P+ V++NV+ N  CK GK++E   L E
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAE 862


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 192/365 (52%), Gaps = 8/365 (2%)

Query: 6    LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
            L  K++  G +PN +TY ++I  LCR      A   F EM  G G       P+T+ YTT
Sbjct: 726  LIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI-GQGIL-----PDTIVYTT 779

Query: 66   IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
            ++DG CK G +  A + F +M   +I P+V+TY ++I GFC   D  EA  LF EM+ +G
Sbjct: 780  LVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRG 839

Query: 126  VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            ++P++++F  +MN  CK G + +A R+   MIQ G  PN   Y TL+DG C  G ++ A 
Sbjct: 840  LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 186  ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            EL   M  +G + N+F+Y+ ++NG CK+  IE A+ L  E  + G+  D V Y TL    
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 246  FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             +  ++++A ++  EM   G+      +   ++G C +G + +  +L   +       + 
Sbjct: 960  CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019

Query: 306  RAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              +NCL+   C    LK A  +++ +  RGV   D  TY  ++   C    M +A  LF 
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE-PDGKTYENLVKGHCNARNMKEAWFLFQ 1078

Query: 365  DMEAK 369
            +M+ K
Sbjct: 1079 EMKGK 1083



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 201/369 (54%), Gaps = 7/369 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRT-GHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EA  +F K+  +G   +V + N  +  L +    T  A+ +F E      E GV    N 
Sbjct: 616 EARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFP----EVGVCW--NV 669

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  +I  +C+ G +++A  L L M+ +   P+V++Y+++I+G+C   + ++   L  +
Sbjct: 670 ASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEK 729

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN  ++  I+  LC+  K+ EA      MI  G+ P+  VY TL+DGFC  G 
Sbjct: 730 MKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD 789

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A + F  M S     +V +Y+ +I+G+C+  ++  A  L+ EML +G++PD++ +  
Sbjct: 790 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTE 849

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   ++ AF++ + M + G + +   Y T IDGLCK G +  A EL   +  + 
Sbjct: 850 LMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 909

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +I  YN +++GLCKSG ++ A +L        L AD VTY  ++ A C  G+MDKA+
Sbjct: 910 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 969

Query: 361 DLFLDMEAK 369
           ++  +M  K
Sbjct: 970 EILTEMLGK 978



 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 6/297 (2%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  LF ++   G EP++ T+  L+NG C+ GH   A  +   M          C PN 
Sbjct: 826  VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAG------CSPNV 879

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            VTYTT+IDGLCKEG +D A EL  +M    + PN+ TYNS+++G C + +  EA  L  E
Sbjct: 880  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 939

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                G+  + V++  +M+  CK+G+MD+A  +L  M+  G++P    +N LM+GFCL G 
Sbjct: 940  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGM 999

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +   E+L   M + G   N  +++ L+  YC    ++ A ++Y +M S+G++PD   Y  
Sbjct: 1000 LEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYEN 1059

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            L  G      ++ A+ LF EM+  G +     Y   I G  K    VEA E+F  +R
Sbjct: 1060 LVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMR 1116



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 187/367 (50%), Gaps = 6/367 (1%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  +F +    G   NV +YN +I+ +C+ G    A +L   M            P+ ++
Sbjct: 653  AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKG------YTPDVIS 706

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            Y+T+I+G C+ G +DK  +L  KMK + + PN  TY S+I   C      EA+  F EM+
Sbjct: 707  YSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMI 766

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             QG+ P+ + +  +++  CK G +  AS+    M    + P+   Y  ++ GFC  G + 
Sbjct: 767  GQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 826

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A +LF  M   G + ++ +++ L+NGYCK   I+ A  +++ M+  G  P+VV Y TL 
Sbjct: 827  EAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLI 886

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             GL +   ++ A +L  EM + G+  + + Y + ++GLCK+G I EAV+L          
Sbjct: 887  DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 946

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             D   Y  L+D  CKSG +  A E+   +    L   +VT+N++++  C  G ++    L
Sbjct: 947  ADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1006

Query: 363  FLDMEAK 369
               M AK
Sbjct: 1007 LNWMLAK 1013



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 153/265 (57%), Gaps = 6/265 (2%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            GC PNV TY TLI+GLC+ G    A  L  EM      + +  +PN  TY +I++GLCK 
Sbjct: 874  GCSPNVVTYTTLIDGLCKEGDLDSANELLHEM------WKIGLQPNIFTYNSIVNGLCKS 927

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            G +++A +L  + +   +N + VTY +L+  +C + + ++A+ +  EM+ +G+QP +V+F
Sbjct: 928  GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTF 987

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            NV+MN  C +G +++  +LL  M+  G+ PNA  +N L+  +C+   +  A  ++  M S
Sbjct: 988  NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCS 1047

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             G + +  +Y  L+ G+C  + ++ A  L+ EM  KG    V  Y+ L  G F+  +   
Sbjct: 1048 RGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVE 1107

Query: 254  AFKLFDEMQRHGVAADTWAYRTFID 278
            A ++FD+M+R G+AAD   +  F D
Sbjct: 1108 AREIFDQMRRDGLAADKEIFDFFSD 1132



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 6/134 (4%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  PN  T+N L+   C   +   A  ++++M +   E      P+  TY  ++ G C  
Sbjct: 1014 GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVE------PDGKTYENLVKGHCNA 1067

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              + +A  LF +MK +  + +V TY+ LI GF     + EA+ +F +M   G+  +   F
Sbjct: 1068 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIF 1127

Query: 134  NVIMNELCKNGKMD 147
            +   +   K  + D
Sbjct: 1128 DFFSDTKYKGKRPD 1141


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 197/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF +++  GC P+V T+N+LI+G  + G       L EEM          CK + V
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG------CKADVV 259

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+  CK G ++ A   F  MK E +  NVVT+++ +  FC      EA  LF +M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N  ++  +++  CK G++D+A  LL+ M++ GV  N   Y  L+DG C   +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE++   ME  G + N   Y+ LI+G+  NK  E AL L SEM +KG++ D+ +Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  +H+++ A  L  +M   G+  +   Y T +D   K+G + EA+ + + +    +
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  Y  LIDGLCK+G +  A   F  +    L  +V  Y  ++  LC +G +++A  
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 362 LFLDMEAK 369
           LF +M  K
Sbjct: 560 LFNEMVHK 567



 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 187/358 (52%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L  ++R  GC+ +V TYN LIN  C+ G    A   F  M       GV+   N V
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE----GVMA--NVV 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++T +D  CKEG V +A +LF +M+   +  N  TY  LI G C A   ++A  L  EM
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QGV  NVV++ V+++ LCK  K+ EA  +L +M + GVR N  +Y TL+ G  +    
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  L   M++ G + ++  Y  LI G C   +++ A SL ++M   G++P+ +IY T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               F+  +V  A  +  ++   G   +   Y   IDGLCK G I EA+  F  +R L  
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + +++AY  L+DGLCK+G L  A +LF  +    +  D V Y  ++      G +  A
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 184/366 (50%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++RV G   N FTY  LI+G C+ G    A+ L +EM             N V
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------NVV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGLCKE  V +A+++   M+   +  N + Y +LIHG     +  +A  L  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ ++  +  ++  LC   K+DEA  LL  M + G+ PN  +Y T+MD    +G+V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   +   G + NV +Y  LI+G CK   I+ A+S +++M   G+ P+V  Y  L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +  A +LF+EM   G++ D   Y   +DG  K G + +A  L   +     
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LD+  Y C I G C    +  A E+F  +    +  D   YN +I      G +++A  
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAIS 664

Query: 362 LFLDME 367
           L  +ME
Sbjct: 665 LQDEME 670



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 177/358 (49%), Gaps = 10/358 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     ++R     PN  T N ++  L R     +   LFE++            PN  
Sbjct: 140 DAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----------APNVF 189

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID LCKEG + +A+ LF +MK+    P+VVT+NSLI G+    + +E + L  EM
Sbjct: 190 TFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEM 249

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G + +VV++N ++N  CK G+M+ A      M + GV  N   ++T +D FC  G V
Sbjct: 250 RRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLV 309

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M   G   N F+Y+ LI+G CK   ++ A+ L  EM+ +G+  +VV Y  L
Sbjct: 310 REAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVL 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V  A  +   M++ GV A+   Y T I G   N    +A+ L   ++    
Sbjct: 370 VDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGL 429

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ELDI  Y  LI GLC   +L  A  L   +    L  + + Y  M+ A    GK+ +A
Sbjct: 430 ELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 156/305 (51%), Gaps = 4/305 (1%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++  L   G +D A     ++++  + PN  T N ++            + LF    +Q
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF----EQ 182

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
              PNV +FN++++ LCK G++ EA  L   M ++G  P+   +N+L+DG+   G ++  
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           E+L   M   GCK +V +Y+ LIN +CK   +E A   ++ M  +G+  +VV ++T    
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   V  A KLF +M+  G+A + + Y   IDG CK G + +A+ L   +      L+
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  L+DGLCK  ++  A ++ R + +  + A+ + Y  +IH    +   +KA  L  
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 365 DMEAK 369
           +M+ K
Sbjct: 423 EMKNK 427



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 137/262 (52%), Gaps = 6/262 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  G E ++  Y  LI GLC       A +L  +M     E      PN +
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE------PNYI 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTT++D   K G V +A  +  K+ D    PNV+TY +LI G C A   +EA   F +M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ PNV ++  +++ LCKNG ++EA +L   M+  G+  +  VY  L+DG+   G +
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G + ++F Y+  I+G+C    +  A  ++SEM+  GI PD  +YN L
Sbjct: 590 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 649

Query: 242 FIGLFEIHQVERAFKLFDEMQR 263
                ++  +E A  L DEM+R
Sbjct: 650 ISKYQKLGNLEEAISLQDEMER 671



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 154/310 (49%), Gaps = 4/310 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PNT T   I+  L +    D++  L  ++ ++   PNV T+N +I   C   +  EA+ L
Sbjct: 155 PNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSL 210

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M + G  P+VV+FN +++   K G++DE  +L+E M + G + +   YN L++ FC 
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR+  A   F +M+  G   NV ++S  ++ +CK   +  A+ L+++M  +G+  +   
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G  +  +++ A  L DEM R GV  +   Y   +DGLCK   + EA ++ R + 
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +   Y  LI G   +   + A  L   +    L  D+  Y  +I  LC   K+D
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 358 KARDLFLDME 367
           +A+ L   M+
Sbjct: 451 EAKSLLTKMD 460



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 131/265 (49%), Gaps = 31/265 (11%)

Query: 134 NVIMNELCKNGKMDEA----SRLLELMIQIGVR--------------------------- 162
           + +++ L   G +D+A    +R+ EL +    R                           
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN F +N ++D  C  G +  A  LF  M+ MGC  +V +++ LI+GY K  E++    L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             EM   G K DVV YN L     +  ++E A+  F  M+R GV A+   + TF+D  CK
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + EA++LF  +R+    L+   Y CLIDG CK+GRL  A  L   + R  +  +VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 343 YNIMIHALCADGKMDKARDLFLDME 367
           Y +++  LC + K+ +A D+   ME
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMME 390



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 8/173 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F K+R  G +PNV  Y  L++GLC+ G    A+ LF EM +           + V
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL------DKV 574

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++DG  K+G +  A  L  KM D  +  ++  Y   I GFC  N   EA+ +F EM
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           +  G+ P+   +N ++++  K G ++EA  L + M +  V P+    +T  DG
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMER--VLPSCTDSDTATDG 685


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 189/357 (52%), Gaps = 6/357 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F ++   G    V+ YN+LING C+ G    A +LF EM N   E      P   T
Sbjct: 419 AISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVE------PTATT 472

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T++I G CK+  V KA +L+ KM D  I PNV T+ +LI G C  N   EA  LF E++
Sbjct: 473 FTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV 532

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ ++P  V++NV++   C++GK+D+A  LLE M Q G+ P+ + Y  L+ G C TGRV+
Sbjct: 533 ERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVS 592

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A++    +     K N   YS L++GYC+   +  ALS   EM+ +GI  D+V +  L 
Sbjct: 593 KAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLI 652

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +    +  F L  +M   G+  D   Y + ID   K G   +A E +  +   +  
Sbjct: 653 DGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECF 712

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++  Y  L++GLCK+G +  A  LF+ +    +  + +TY   +  L  +G M +A
Sbjct: 713 PNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEA 769



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 193/402 (48%), Gaps = 41/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L +K+  FG  PN+F YN LIN LC+ G    A  L+  M+  N       +PN +
Sbjct: 348 DAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN------LRPNGI 401

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +ID  C+ G +D A   F +M  + I   V  YNSLI+G C   D + A+ LFIEM
Sbjct: 402 TYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEM 461

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+P   +F  +++  CK+ ++ +A +L   MI  G+ PN + +  L+ G C T ++
Sbjct: 462 TNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKM 521

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ELF  +     K    +Y++LI GYC++ +I+ A  L  +M  KG+ PD   Y  L
Sbjct: 522 AEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPL 581

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV----------- 290
             GL    +V +A    D++ +  V  +   Y   + G C+ G ++EA+           
Sbjct: 582 ISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641

Query: 291 ------------------------ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                                   +L + +       D   Y  +ID   K G  K A+E
Sbjct: 642 NMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFE 701

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +  +       +VVTY  +++ LC  G+MD+A  LF  M+A
Sbjct: 702 CWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQA 743



 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 105/346 (30%), Positives = 186/346 (53%), Gaps = 6/346 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +V TY TL+ G CR       + L +EM     E G    P     + ++DGL K+
Sbjct: 290 GLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMV----ELGF--SPTEAAVSGLVDGLRKQ 343

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A EL +K+      PN+  YN+LI+  C   D ++A+ L+  M    ++PN +++
Sbjct: 344 GKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITY 403

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  C++G++D A    + MIQ G+    + YN+L++G C  G ++ AE LF+ M +
Sbjct: 404 SILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTN 463

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G +    +++ LI+GYCK+ +++ A  LY++M+  GI P+V  +  L  GL   +++  
Sbjct: 464 KGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAE 523

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LFDE+    +      Y   I+G C++G I +A EL   +       D   Y  LI 
Sbjct: 524 ASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLIS 583

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           GLC +GR+  A +    L +  +  + + Y+ ++H  C +G++ +A
Sbjct: 584 GLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEA 629



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 187/356 (52%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + ++ TYN LI+GLC+      A+ +   +  G G        + VTY T++ G C+ 
Sbjct: 255 GFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLG-GKG-----LAADVVTYCTLVLGFCRL 308

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              +   +L  +M +   +P     + L+ G       ++A  L +++   G  PN+  +
Sbjct: 309 QQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVY 368

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LCK G +D+A  L   M  + +RPN   Y+ L+D FC +GR++ A   F  M  
Sbjct: 369 NALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQ 428

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    V++Y+ LING CK  ++  A SL+ EM +KG++P    + +L  G  +  QV++
Sbjct: 429 DGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQK 488

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AFKL+++M  +G+  + + +   I GLC    + EA ELF  L   K +     YN LI+
Sbjct: 489 AFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIE 548

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G C+ G++  A+EL   + +  L+ D  TY  +I  LC+ G++ KA+D   D+  +
Sbjct: 549 GYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQ 604



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 186/364 (51%), Gaps = 7/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF+++   G EP   T+ +LI+G C+      A  L+ +M + NG       PN  T
Sbjct: 454 AESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID-NG-----ITPNVYT 507

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T +I GLC    + +A ELF ++ +  I P  VTYN LI G+C     ++A  L  +M 
Sbjct: 508 FTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH 567

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+  ++  +++ LC  G++ +A   ++ + +  V+ N   Y+ L+ G+C  GR+ 
Sbjct: 568 QKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLM 627

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A      M   G   ++  +++LI+G  K  + +    L  +M  +G++PD VIY ++ 
Sbjct: 628 EALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMI 687

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +    ++AF+ +D M       +   Y   ++GLCK G +  A  LF+ ++     
Sbjct: 688 DTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVP 747

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   Y C +D L K G +K A  L  ++ +G L+A+ VT+NI+I   C  G+  +A  +
Sbjct: 748 PNSITYGCFLDNLTKEGNMKEAIGLHHAMLKG-LLANTVTHNIIIRGFCKLGRFHEATKV 806

Query: 363 FLDM 366
             +M
Sbjct: 807 LSEM 810



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 184/365 (50%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ LF +L     +P   TYN LI G CR G    A  L E+M     + G+V  P+T 
Sbjct: 523 EASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMH----QKGLV--PDTY 576

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLC  G V KAK+    +  +N+  N + Y++L+HG+C      EA     EM
Sbjct: 577 TYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEM 636

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  ++V   V+++   K         LL+ M   G+RP+  +Y +++D +   G  
Sbjct: 637 IQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSF 696

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E +  M +  C  NV +Y+ L+NG CK  E++ A  L+  M +  + P+ + Y   
Sbjct: 697 KKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCF 756

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   ++ A  L   M + G+ A+T  +   I G CK G   EA ++   +     
Sbjct: 757 LDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGI 815

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y+ LI   C+SG +  + +L+ ++    L  D+V YN++I+  C +G++DKA +
Sbjct: 816 FPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFE 875

Query: 362 LFLDM 366
           L  DM
Sbjct: 876 LRDDM 880



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 37/303 (12%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--------------------- 56
           N   Y+ L++G C+ G  + AL+   EM        +VC                     
Sbjct: 609 NEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLL 668

Query: 57  --------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 108
                   +P+ V YT++ID   KEG   KA E +  M  E   PNVVTY +L++G C A
Sbjct: 669 KDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKA 728

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
            + + A  LF  M    V PN +++   ++ L K G M EA  L   M++ G+  N   +
Sbjct: 729 GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTH 787

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N ++ GFC  GR + A ++   M   G   +  +YS LI  YC++  +  ++ L+  ML+
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLN 847

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G++PD+V YN L  G     ++++AF+L D+M R G+  D          L K G I E
Sbjct: 848 RGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPDN-------KYLQKKGTIFE 900

Query: 289 AVE 291
           A  
Sbjct: 901 ATH 903



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 121/221 (54%), Gaps = 7/221 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   Y ++I+   + G    A   ++ M          C PN VTYT +++GLCK 
Sbjct: 675 GLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEE------CFPNVVTYTALMNGLCKA 728

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A  LF +M+  N+ PN +TY   +       +  EA  L   M+ +G+  N V+ 
Sbjct: 729 GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAML-KGLLANTVTH 787

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+I+   CK G+  EA+++L  M + G+ P+   Y+TL+  +C +G V  + +L+ +M +
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLN 847

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            G + ++ +Y++LI G C N E++ A  L  +ML +GI PD
Sbjct: 848 RGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 136/280 (48%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N+ P V T ++L++G      +     LF E ++ GV+P+  + + ++  +C+      A
Sbjct: 185 NLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRA 244

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
              +  M   G   +   YN L+ G C   RV+ A E+  S+   G   +V +Y  L+ G
Sbjct: 245 KEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLG 304

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +C+ ++ E  + L  EM+  G  P     + L  GL +  +++ A++L  ++ R G   +
Sbjct: 305 FCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPN 364

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
            + Y   I+ LCK G + +A  L+  + ++    +   Y+ LID  C+SGRL +A   F 
Sbjct: 365 LFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFD 424

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +  +   V  YN +I+  C  G +  A  LF++M  K
Sbjct: 425 RMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 106/314 (33%), Positives = 185/314 (58%), Gaps = 3/314 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C PN+VT+  +++G  K+G     + L   M   +I PNVV+YN L+ G C    W+EA+
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 116 CLFIEMMDQGVQ--PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
            L  +M+ +G +  P++V+++ +++  CK GK++E+  LL+ +I  G+RP+A +Y  ++ 
Sbjct: 66  ELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVA 125

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C + R+  A EL   M   GC   + +++ LI+G C+ K +E A SL  +M + G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKA 185

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV YNTL  GL +  +++ A +L + M+  G A D  AY +F+ GLCK+G +++A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVL 245

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIMIHALCA 352
             +R   ++ ++  YN ++DGLCKSG++  A E+   +        +VV Y+ ++  LC 
Sbjct: 246 EQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 353 DGKMDKARDLFLDM 366
            G+  +AR +   M
Sbjct: 306 LGRTQEARSVMEAM 319



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 188/352 (53%), Gaps = 5/352 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PNV +YN L+ GLC+      A  L  +M +  G       P+ VTY+T++ G CK G 
Sbjct: 42  QPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRS----TPDMVTYSTLLSGYCKAGK 97

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V++++EL  ++    + P+ + Y  ++   C +    EA  L  EM+  G  P +++FN 
Sbjct: 98  VEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNT 157

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  C+   ++ A  LL+ M   GV+ +   YNTLMDG C  GR+  AE+L   M++ G
Sbjct: 158 LISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG 217

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  +V +YS  + G CK+ ++  A  +  +M      P+VV YNT+  GL +  +++ A 
Sbjct: 218 CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTAL 277

Query: 256 KLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           ++ ++M    G   +   Y T +DGLCK G   EA  +   +       D+  Y+ L++G
Sbjct: 278 EMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNG 337

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LCK+G+++ A E  R +       + VTY  ++H LC+ G++ +A  +  +M
Sbjct: 338 LCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 113/313 (36%), Positives = 176/313 (56%), Gaps = 12/313 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P + T+NTLI+G CR  +  +A +L ++MA      GV  K + VTY T++DGLCK 
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQKMAAS----GV--KADVVTYNTLMDGLCKA 200

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A++L  +MK     P+VV Y+S ++G C +    +A  +  +M D    PNVV++
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTY 260

Query: 134 NVIMNELCKNGKMDEASRLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           N I++ LCK+GK+D A  ++E M    G   N   Y+T++DG C  GR   A  +  +M 
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC+ +V +YS L+NG CK  +IE A+    EM  +G KP+ V Y +L  GL    ++ 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 253 RAFKLFDEMQRHG-----VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
            A ++ +EM   G            Y   I GLCK G I +A++ F+ +R    + D  +
Sbjct: 381 EAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 308 YNCLIDGLCKSGR 320
           Y+ +++GL +SGR
Sbjct: 441 YSTIVEGLARSGR 453



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 181/364 (49%), Gaps = 12/364 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  L  ++   G  P+   Y  ++  LC++     AL L EEM          C P  +
Sbjct: 100 ESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAG------CCPTLI 153

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I G C+E  ++ A  L  KM    +  +VVTYN+L+ G C A    EA+ L   M
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VV+++  +  LCK+GK+ +A ++LE M      PN   YNT++DG C +G++
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKI 273

Query: 182 NRAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + A E+   M S  GC  NV  YS +++G CK    + A S+   M   G +PDVV Y++
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  ++E A +   EM   G   +   Y + + GLC  G + EA  +   +    
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGG 393

Query: 301 YEL-----DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
                    +  YN LI GLCK+GR+  A + F+ +       D V+Y+ ++  L   G+
Sbjct: 394 GGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453

Query: 356 MDKA 359
             +A
Sbjct: 454 ALQA 457



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 161/306 (52%), Gaps = 22/306 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A +L  K+   G + +V TYNTL++GLC+ G    A  L E M A+G       C P+ V
Sbjct: 171 ADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASG-------CAPDVV 223

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y++ + GLCK G V  A ++  +M+D + +PNVVTYN+++ G C +   + A    +EM
Sbjct: 224 AYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTA----LEM 279

Query: 122 MDQ-----GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           M+Q     G   NVV ++ +++ LCK G+  EA  ++E M + G RP+   Y++L++G C
Sbjct: 280 MEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLC 339

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-----LSKGI 231
             G++  A E    M   GCK N  +Y  L++G C    +  A  +  EM          
Sbjct: 340 KAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHC 399

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P V  YN L  GL +  +++ A K F  M+  G   D  +Y T ++GL ++G  ++A  
Sbjct: 400 PPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEM 459

Query: 292 LFRTLR 297
           +   +R
Sbjct: 460 ILSEVR 465



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 144/267 (53%), Gaps = 12/267 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +++  GC P+V  Y++ + GLC++G  + A  + E+M + + +      PN V
Sbjct: 205 EAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHD------PNVV 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY TI+DGLCK G +D A E+  +M   +    NVV Y++++ G C      EA+ +   
Sbjct: 259 TYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEA 318

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G +P+VV+++ ++N LCK GK++EA   +  M   G +PNA  Y +L+ G C  GR
Sbjct: 319 MARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGR 378

Query: 181 VNRAEELFVSM-----ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           +  AE +   M         C  +V +Y+ LI G CK   I+ AL  +  M S+G  PD 
Sbjct: 379 LAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDG 438

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           V Y+T+  GL    +  +A  +  E++
Sbjct: 439 VSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 140/285 (49%), Gaps = 38/285 (13%)

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MD+ G  PN V+FN ++N   K G+  +  RLLE M    ++PN   YN L++G C   R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 181 VNRAEELFVSMESMGCKH--NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            + AEEL   M S G +   ++ +YS L++GYCK  ++E +  L  E++S+G++PD ++Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 239 -----------------------------------NTLFIGLFEIHQVERAFKLFDEMQR 263
                                              NTL  G      +E A  L  +M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            GV AD   Y T +DGLCK G + EA +L   ++      D+ AY+  + GLCKSG++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           A ++   +       +VVTYN ++  LC  GK+D A ++   M +
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMAS 285



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 128/231 (55%), Gaps = 10/231 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  +  ++R    +PNV TYNT+++GLC++G    AL + E+MA+ +G     C  N 
Sbjct: 239 LDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG-----CGLNV 293

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+T++DGLCK G   +A+ +   M      P+VVTY+SL++G C A    EA     E
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR-----PNAFVYNTLMDGF 175
           M  +G +PN V++  +++ LC  G++ EA R++E M   G       P+   YN L+ G 
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGL 413

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           C  GR++ A + F  M S GC  +  SYS ++ G  ++     A  + SE+
Sbjct: 414 CKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILSEV 464


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 182/314 (57%), Gaps = 3/314 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C PN+VT+  +++G  K+G     + L   M    I PNVV+YN L+ G C    W+EA+
Sbjct: 6   CPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAE 65

Query: 116 CLFIEMMDQGVQ--PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
            L  +M+ +G +  P++V+++ +++  CK GK++E+  LL+ +I  G+RP+A +Y  +M 
Sbjct: 66  ELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMA 125

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C + R+  A EL   M   GC   + +++ LI+G C+ K +E A SL   M + G+K 
Sbjct: 126 SLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKA 185

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV YNTL  GL +  +++ A +L + M+  G A D  AY +F+ GLCK+G ++ A ++ 
Sbjct: 186 DVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVL 245

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIMIHALCA 352
             +R   ++ ++  YN ++DGLCKSG++  A E+   +        +VV Y+ ++  LC 
Sbjct: 246 EQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCK 305

Query: 353 DGKMDKARDLFLDM 366
            G+  +AR +   M
Sbjct: 306 LGRTQEARSVMEAM 319



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 191/362 (52%), Gaps = 5/362 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L   +   G +PNV +YN L+ GLC+      A  L  +M +  G       P+ VTY+T
Sbjct: 32  LLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRS----TPDLVTYST 87

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ G CK G V++++EL  ++    + P+ + Y  ++   C +    EA  L  EM+  G
Sbjct: 88  LLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAG 147

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P +++FN +++  C+   ++ A  LL+ M   GV+ +   YNTLMDG C  GR+  AE
Sbjct: 148 CCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAE 207

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   M++ GC  +V +YS  + G CK+ ++  A  +  +M      P+VV YNT+  GL
Sbjct: 208 QLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGL 267

Query: 246 FEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            +  +++ A ++ ++M    G   +   Y T +DGLCK G   EA  +   +       D
Sbjct: 268 CKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPD 327

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+ L++GLCK+G+++ A E  R +       + VTY  ++H LC+ G++ +A  +  
Sbjct: 328 VVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVE 387

Query: 365 DM 366
           +M
Sbjct: 388 EM 389



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/313 (36%), Positives = 175/313 (55%), Gaps = 12/313 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P + T+NTLI+G CR  +  +A +L + MA      GV  K + VTY T++DGLCK 
Sbjct: 147 GCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS----GV--KADVVTYNTLMDGLCKA 200

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A++L  +MK     P+VV Y+S ++G C +     A  +  +M D    PNVV++
Sbjct: 201 GRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTY 260

Query: 134 NVIMNELCKNGKMDEASRLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           N I++ LCK+GK+D A  ++E M    G   N   Y+T++DG C  GR   A  +  +M 
Sbjct: 261 NTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMA 320

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC+ +V +YS L+NG CK  +IE A+    EM  +G KP+ V Y +L  GL    ++ 
Sbjct: 321 RAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLA 380

Query: 253 RAFKLFDEMQRHGVAAD-----TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
            A ++ +EM   G   D        Y   I GLCK G I +A++ F+ +R    + D  +
Sbjct: 381 EAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVS 440

Query: 308 YNCLIDGLCKSGR 320
           Y+ +++GL +SGR
Sbjct: 441 YSTIVEGLARSGR 453



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 180/364 (49%), Gaps = 12/364 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  L  ++   G  P+   Y  ++  LC++     AL L EEM          C P  +
Sbjct: 100 ESRELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAG------CCPTLI 153

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I G C+E  ++ A  L   M    +  +VVTYN+L+ G C A    EA+ L   M
Sbjct: 154 TFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERM 213

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VV+++  +  LCK+GK+  A ++LE M      PN   YNT++DG C +G++
Sbjct: 214 KASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKI 273

Query: 182 NRAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + A E+   M S  GC  NV  YS +++G CK    + A S+   M   G +PDVV Y++
Sbjct: 274 DTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSS 333

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  ++E A +   EM   G   +   Y + + GLC  G + EA  +   +    
Sbjct: 334 LVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGG 393

Query: 301 YELD-----IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
              D     +  YN LI GLCK+GR+  A + F+ +       D V+Y+ ++  L   G+
Sbjct: 394 GGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGR 453

Query: 356 MDKA 359
             +A
Sbjct: 454 ALQA 457



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 140/286 (48%), Gaps = 38/286 (13%)

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MD+ G  PN V+FN ++N   K G+  +  RLLE M   G++PN   YN L++G C   R
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 181 VNRAEELFVSMESMGCKH--NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            + AEEL   M S G +   ++ +YS L++GYCK  ++E +  L  E++S+G++PD ++Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 239 -----------------------------------NTLFIGLFEIHQVERAFKLFDEMQR 263
                                              NTL  G      +E A  L   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            GV AD   Y T +DGLCK G + EA +L   ++      D+ AY+  + GLCKSG++  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A ++   +       +VVTYN ++  LC  GK+D A ++   M + 
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASS 286



 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 122/218 (55%), Gaps = 10/218 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  +  ++R    +PNV TYNT+++GLC++G    AL + E+MA+ +G     C  N 
Sbjct: 239 LNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDG-----CGLNV 293

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+T++DGLCK G   +A+ +   M      P+VVTY+SL++G C A    EA     E
Sbjct: 294 VGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVRE 353

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR-----PNAFVYNTLMDGF 175
           M  +G +PN V++  +++ LC  G++ EA R++E M   G       P+   YN L+ G 
Sbjct: 354 MAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGL 413

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           C  GR++ A + F  M S GC  +  SYS ++ G  ++
Sbjct: 414 CKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARS 451


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 128/367 (34%), Positives = 187/367 (50%), Gaps = 9/367 (2%)

Query: 2   EAAALF--MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           EA+ L   M+ +  GC  N  TYN +I+ L R GH   A  L + M           K +
Sbjct: 261 EASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-------KAS 313

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           + TY  +I  L + GFV K + L ++M++E I P +VTYN++IHG   +     A+  F 
Sbjct: 314 SFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFA 373

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G+ P+++++N ++N  CK G + EA  LL  + + G+ P    YNTL+DG+C  G
Sbjct: 374 EMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A  L   M   GC  +V +Y+IL+NG  K + +  A   + EMLSKG++PD   YN
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN 493

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T       +    +AF+L + M   G+  DT  Y   IDGLCK G + +A +L   +   
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD 553

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D   Y CLI   C+ G L  A +L   +    L   VVTY I+IH  C  G +  A
Sbjct: 554 GLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSA 613

Query: 360 RDLFLDM 366
              F  M
Sbjct: 614 YGWFRKM 620



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 180/363 (49%), Gaps = 6/363 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL M++   G  P + TYN +I+GL ++     A   F EM       G++  P+ +TY 
Sbjct: 335 ALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMR----AMGLL--PDLITYN 388

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++++G CK G + +A  L   ++   + P V+TYN+LI G+C      EA+ L  EM++Q
Sbjct: 389 SMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQ 448

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+V ++ ++MN   K   +  A    + M+  G++P+ F YNT +    + G  ++A
Sbjct: 449 GCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKA 508

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +L   M   G   +  +Y+++I+G CK   ++ A  L  +M+S G++PD + Y  L   
Sbjct: 509 FQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHA 568

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             E   +  A KL + M   G+      Y   I   C+ G +  A   FR +  +  E +
Sbjct: 569 HCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPN 628

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              YN LI  LC++GR  +A+  F  +    L  +  TY ++I   C +G    A  L+ 
Sbjct: 629 EITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYF 688

Query: 365 DME 367
           +M 
Sbjct: 689 EMH 691



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 156/316 (49%), Gaps = 6/316 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   LR  G  P V TYNTLI+G CR G    A  L EEM          C P+  
Sbjct: 402 EALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQG------CFPDVC 455

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++G  K   +  A+E F +M  + + P+   YN+ I       D ++A  L   M
Sbjct: 456 TYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVM 515

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ P+ V++NVI++ LCK G + +A  L   M+  G++P+   Y  L+   C  G +
Sbjct: 516 MLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLL 575

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M S G + +V +Y+ILI+  C+   +  A   + +ML  GI+P+ + YN L
Sbjct: 576 SEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 635

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    +   A+  F EM   G+A + + Y   IDG C+ G   +A+ L+  +     
Sbjct: 636 IHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGI 695

Query: 302 ELDIRAYNCLIDGLCK 317
             D   +N L  G  K
Sbjct: 696 PPDYCTHNALFKGFDK 711



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 174/347 (50%), Gaps = 7/347 (2%)

Query: 1   MEAAAL-FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +EAA L F ++R  G  P++ TYN+++NG C+ G+   AL L  ++            P 
Sbjct: 365 VEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAG------LAPT 418

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TY T+IDG C+ G +++A+ L  +M ++   P+V TY  L++G     +   A+  F 
Sbjct: 419 VLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFD 478

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +G+QP+  ++N  +      G   +A +L E+M+  G+ P+   YN ++DG C TG
Sbjct: 479 EMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTG 538

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A++L + M S G + +  +Y+ LI+ +C+   +  A  L + M+S G++P VV Y 
Sbjct: 539 NLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYT 598

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L         +  A+  F +M   G+  +   Y   I  LC+ G  + A   F  +   
Sbjct: 599 ILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLER 658

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
               +   Y  LIDG C+ G    A  L+  + +  +  D  T+N +
Sbjct: 659 GLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNAL 705



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 162/346 (46%), Gaps = 36/346 (10%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-------NINPNVV------------- 96
           +P  VTY T++D   KEG  D+A  L  +M+ +       ++  NVV             
Sbjct: 240 EPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENA 299

Query: 97  ----------------TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
                           TYN LI          + + L +EM ++G+ P +V++N I++ L
Sbjct: 300 AKLVDSMRLSKKASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL 359

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            K+ +++ A      M  +G+ P+   YN++++G+C  G +  A  L   +   G    V
Sbjct: 360 LKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTV 419

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ LI+GYC+   +E A  L  EM+ +G  PDV  Y  L  G  ++  +  A + FDE
Sbjct: 420 LTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDE 479

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G+  D +AY T I      G   +A +L   + +     D   YN +IDGLCK+G 
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LK A +L   +    L  D +TY  +IHA C  G + +AR L   M
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGM 585



 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 127/247 (51%), Gaps = 6/247 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F ++   G +P+ F YNT I      G T  A  L E M       G+   P+TVT
Sbjct: 473 AREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLK----GIY--PDTVT 526

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  IIDGLCK G +  AK+L +KM  + + P+ +TY  LIH  C     +EA+ L   M+
Sbjct: 527 YNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMV 586

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+QP+VV++ ++++  C+ G +  A      M+ +G+ PN   YN L+   C TGR  
Sbjct: 587 SDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTL 646

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A   F  M   G   N ++Y++LI+G C+      A+ LY EM   GI PD   +N LF
Sbjct: 647 LAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALF 706

Query: 243 IGLFEIH 249
            G  + H
Sbjct: 707 KGFDKGH 713



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/327 (27%), Positives = 158/327 (48%), Gaps = 38/327 (11%)

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ--GVQPNVVSFN 134
           D  + ++ +M    I P +VTYN+L+  F      +EA  L  EM  Q  G   N V++N
Sbjct: 225 DDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYN 284

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           V+++ L + G ++ A++L++ M ++  + ++F YN L+      G V + E L + ME+ 
Sbjct: 285 VVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITALLERGFVQKVEALQMEMENE 343

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G    + +Y+ +I+G  K++++E A   ++EM + G+ PD++ YN++  G  +   ++ A
Sbjct: 344 GIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEA 403

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L  +++R G+A     Y T IDG C+ G + EA  L   +       D+  Y  L++G
Sbjct: 404 LWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNG 463

Query: 315 LCKSGRLKIAWELFRS-LPRGV----------------------------------LIAD 339
             K   L +A E F   L +G+                                  +  D
Sbjct: 464 SHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPD 523

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
            VTYN++I  LC  G +  A+DL + M
Sbjct: 524 TVTYNVIIDGLCKTGNLKDAKDLKMKM 550



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 139/283 (49%), Gaps = 3/283 (1%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
             + P+V   N ++     A  W++ + ++ EM+   ++P +V++N +++   K G+ DE
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 149 ASRLLELMIQIG--VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           AS LL+ M   G     N   YN ++      G +  A +L  SM  +  K + F+Y+ L
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMR-LSKKASSFTYNPL 320

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I    +   ++   +L  EM ++GI P +V YN +  GL +  QVE A   F EM+  G+
Sbjct: 321 ITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y + ++G CK G + EA+ L   LR       +  YN LIDG C+ G L+ A  
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR 440

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   +       DV TY I+++       +  AR+ F +M +K
Sbjct: 441 LKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSK 483



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 3/150 (2%)

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L+ +  +   G+ PDV   N +   L +  + +    ++ EM +  +      Y T +D 
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 280 LCKNGYIVEAVELFRTLRILKYE--LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             K G   EA  L + +        L+   YN +I  L + G L+ A +L  S+ R    
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKK 311

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
           A   TYN +I AL   G + K   L ++ME
Sbjct: 312 ASSFTYNPLITALLERGFVQKVEALQMEME 341


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 197/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF +++  GC P+V T+N+LI+G  + G       L EEM          CK + V
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG------CKADVV 259

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+  CK G ++ A   F  MK E +  NVVT+++ +  FC      EA  LF +M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N  ++  +++  CK G++D+A  LL+ M++ GV  N   Y  L+DG C   +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE++   ME  G + N   Y+ LI+G+  NK  E AL L SEM +KG++ D+ +Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  +H+++ A  L  +M   G+  +   Y T +D   K+G + EA+ + + +    +
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  Y  LIDGLCK+G +  A   F  +    L  +V  Y  ++  LC +G +++A  
Sbjct: 500 QPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQ 559

Query: 362 LFLDMEAK 369
           LF +M  K
Sbjct: 560 LFNEMVHK 567



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/358 (34%), Positives = 187/358 (52%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L  ++R  GC+ +V TYN LIN  C+ G    A   F  M       GV+   N V
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE----GVMA--NVV 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++T +D  CKEG V +A +LF +M+   +  N  TY  LI G C A   ++A  L  EM
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QGV  NVV++ V+++ LCK  K+ EA  +L +M + GVR N  +Y TL+ G  +    
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  L   M++ G + ++  Y  LI G C   +++ A SL ++M   G++P+ +IY T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               F+  +V  A  +  ++   G   +   Y   IDGLCK G I EA+  F  +R L  
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGL 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + +++AY  L+DGLCK+G L  A +LF  +    +  D V Y  ++      G +  A
Sbjct: 535 DPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 592



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 184/366 (50%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++RV G   N FTY  LI+G C+ G    A+ L +EM             N V
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------NVV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGLCKE  V +A+++   M+   +  N + Y +LIHG     +  +A  L  EM
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ ++  +  ++  LC   K+DEA  LL  M + G+ PN  +Y T+MD    +G+V
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   +   G + NV +Y  LI+G CK   I+ A+S +++M   G+ P+V  Y  L
Sbjct: 485 PEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTAL 544

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +  A +LF+EM   G++ D   Y   +DG  K G + +A  L   +     
Sbjct: 545 VDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGL 604

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LD+  Y C I G C    +  A E+F  +    +  D   YN +I      G +++A  
Sbjct: 605 QLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAIS 664

Query: 362 LFLDME 367
           L  +ME
Sbjct: 665 LQDEME 670



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 179/359 (49%), Gaps = 13/359 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A A   +LRV    PN  T N ++  L R     +   LFE++            PN 
Sbjct: 142 VRAVARVRELRV---PPNTRTCNHILLRLARDRSGRLVRRLFEQLP----------APNV 188

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  +ID LCKEG + +A+ LF +MK+    P+VVT+NSLI G+    + +E + L  E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G + +VV++N ++N  CK G+M+ A      M + GV  N   ++T +D FC  G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A +LF  M   G   N F+Y+ LI+G CK   ++ A+ L  EM+ +G+  +VV Y  
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +V  A  +   M++ GV A+   Y T I G   N    +A+ L   ++   
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ELDI  Y  LI GLC   +L  A  L   +    L  + + Y  M+ A    GK+ +A
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 130/242 (53%), Gaps = 4/242 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN  + N I+  L +    D + RL+  + +    PN F +N ++D  C  G +  A 
Sbjct: 153 VPPNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEAR 208

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF  M+ MGC  +V +++ LI+GY K  E++    L  EM   G K DVV YN L    
Sbjct: 209 SLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCF 268

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  ++E A+  F  M+R GV A+   + TF+D  CK G + EA++LF  +R+    L+ 
Sbjct: 269 CKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNE 328

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y CLIDG CK+GRL  A  L   + R  +  +VVTY +++  LC + K+ +A D+   
Sbjct: 329 FTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRM 388

Query: 366 ME 367
           ME
Sbjct: 389 ME 390



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 156/305 (51%), Gaps = 4/305 (1%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++  L   G +D A     ++++  + PN  T N ++            + LF    +Q
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF----EQ 182

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
              PNV +FN++++ LCK G++ EA  L   M ++G  P+   +N+L+DG+   G ++  
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           E+L   M   GCK +V +Y+ LIN +CK   +E A   ++ M  +G+  +VV ++T    
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   V  A KLF +M+  G+A + + Y   IDG CK G + +A+ L   +      L+
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  L+DGLCK  ++  A ++ R + +  + A+ + Y  +IH    +   +KA  L  
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 365 DMEAK 369
           +M+ K
Sbjct: 423 EMKNK 427



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 137/262 (52%), Gaps = 6/262 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  G E ++  Y  LI GLC       A +L  +M     E      PN +
Sbjct: 416 KALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE------PNYI 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTT++D   K G V +A  +  K+ D    PNV+TY +LI G C A   +EA   F +M
Sbjct: 470 IYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKM 529

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ PNV ++  +++ LCKNG ++EA +L   M+  G+  +  VY  L+DG+   G +
Sbjct: 530 RDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNL 589

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G + ++F Y+  I+G+C    +  A  ++SEM+  GI PD  +YN L
Sbjct: 590 HDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCL 649

Query: 242 FIGLFEIHQVERAFKLFDEMQR 263
                ++  +E A  L DEM+R
Sbjct: 650 ISKYQKLGNLEEAISLQDEMER 671



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 154/310 (49%), Gaps = 4/310 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PNT T   I+  L +    D++  L  ++ ++   PNV T+N +I   C   +  EA+ L
Sbjct: 155 PNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSL 210

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M + G  P+VV+FN +++   K G++DE  +L+E M + G + +   YN L++ FC 
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR+  A   F +M+  G   NV ++S  ++ +CK   +  A+ L+++M  +G+  +   
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G  +  +++ A  L DEM R GV  +   Y   +DGLCK   + EA ++ R + 
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +   Y  LI G   +   + A  L   +    L  D+  Y  +I  LC   K+D
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 358 KARDLFLDME 367
           +A+ L   M+
Sbjct: 451 EAKSLLTKMD 460



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 6/158 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F K+R  G +PNV  Y  L++GLC+ G    A+ LF EM +           + V
Sbjct: 521 EAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSL------DKV 574

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++DG  K+G +  A  L  KM D  +  ++  Y   I GFC  N   EA+ +F EM
Sbjct: 575 VYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEM 634

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           +  G+ P+   +N ++++  K G ++EA  L + M ++
Sbjct: 635 IGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEMERV 672


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 125/366 (34%), Positives = 189/366 (51%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  K+   GC P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ V
Sbjct: 4   EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 57

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++IDGL KE    +A +LF +M    +  + V Y +LI          +A  ++  M
Sbjct: 58  TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 117

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VV+ + +++ L K G++  A R+ + M   G+ PN  VY+ L+ G C   ++
Sbjct: 118 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 177

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+   M+   C  +  +Y++LI+G CK+ ++E A + + EML  G KPDV  YN L
Sbjct: 178 DCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237

Query: 242 FIGLFEIHQVERA-FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
             G  +    + A   L  E   +G   D   Y   +D L KN  I EAV L   +    
Sbjct: 238 ISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANG 297

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
               I  YN L++GLCK GRL+ A +L R +       DVVTY  +I  L  + +  +A 
Sbjct: 298 CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAY 357

Query: 361 DLFLDM 366
            LF +M
Sbjct: 358 KLFKEM 363



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 190/367 (51%), Gaps = 5/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A F ++   GC+P+V+TYN LI+G C+ G+T  A +   +    NG     C  +  T
Sbjct: 215 ARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTING-----CTIDIHT 269

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT I+D L K   +++A  L  K+      P + TYN+L++G C      EA  L  +++
Sbjct: 270 YTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 329

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D G  P+VV++  +++ L K  +  EA +L + M   G+  +   Y  L+     TG++ 
Sbjct: 330 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 389

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  ++ +M S GC  +V + S +I+G  K   I  A+ ++  M ++G+ P+ V+Y+ L 
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 449

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  +++ A ++  +M++     DT  Y   IDGLCK+G +  A   F  +     +
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 509

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  YN LI G CK+G    A  +F  +      A+VVTY  +I  LC   ++ KA   
Sbjct: 510 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLY 569

Query: 363 FLDMEAK 369
           F  M+ +
Sbjct: 570 FQHMKER 576



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/299 (32%), Positives = 144/299 (48%), Gaps = 41/299 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  K+   GC P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ V
Sbjct: 285 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 338

Query: 62  TYTTIIDGLCKE-----------------------------------GFVDKAKELFLKM 86
           TYT++IDGL KE                                   G + +A  ++  M
Sbjct: 339 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTM 398

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                 P+VVT +++I G   A     A  +F  M  +G+ PN V ++ +++ LCK  KM
Sbjct: 399 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 458

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A  +L  M +    P+   YN L+DG C +G V  A   F  M   GCK +V++Y+IL
Sbjct: 459 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 518

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           I+G+CK    + A  ++ +M S     +VV Y  L  GL +  Q+ +A   F  M+  G
Sbjct: 519 ISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 150/297 (50%), Gaps = 7/297 (2%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +++A  L  K+      P + TYN+L++G C      EA  L  +++D G  P+VV++  
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L K  +  EA +L + M   G+  +   Y  L+     TG++ +A  ++ +M S G
Sbjct: 62  LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  +V + S +I+G  K   I  A+ ++  M ++G+ P+ V+Y+ L  GL +  +++ A 
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 181

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++  +M++     DT  Y   IDGLCK+G +  A   F  +     + D+  YN LI G 
Sbjct: 182 EMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 241

Query: 316 CKSGRLKIAWELFRSLPRGVLI----ADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           CK+G    A     SL +   I     D+ TY  ++  L  + K+++A  L   + A
Sbjct: 242 CKAGNTDAASH---SLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITA 295



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 112/222 (50%)

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K++EA  L+E +   G  P    YN L++G C  GR+  A +L   +   GC  +V +Y+
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G  K K    A  L+ EM  +G+  D V Y  L   L +  ++ +A  ++  M  H
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D     T IDGL K G I  AV +F+++       +   Y+ LI GLCK+ ++  A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            E+   + +     D +TYN++I  LC  G ++ AR  F +M
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEM 222



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 62/188 (32%), Positives = 100/188 (53%)

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  A  L   + + GC   + +Y+ L+NG CK   +E A+ L  +++  G  PDVV Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  GL +  +   A+KLF EM   G+A DT  Y   I  L + G I +A  +++T+   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+   + +IDGL K+GR+  A  +F+S+    L  + V Y+ +IH LC   KMD A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 360 RDLFLDME 367
            ++   M+
Sbjct: 181 LEMLAQMK 188



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 81/155 (52%)

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +IE A++L  ++ + G  P +  YN L  GL ++ ++E A  L  ++  +G   D   Y 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           + IDGL K     EA +LF+ + +    LD   Y  LI  L ++G++  A  +++++   
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + DVVT + MI  L   G++  A  +F  MEA+
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 155


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 203/404 (50%), Gaps = 44/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +R  G   +V TY TLI GLC       A+ L  EM     E G+  +PN V
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC----ESGI--EPNVV 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y++++ G CK G  +   ++F++M ++ I P+VV Y  LI   C      +A  +   M
Sbjct: 187 VYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNG-----------------------------------KM 146
           + +G++PNVV++NV++N +CK G                                   +M
Sbjct: 247 VRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEM 306

Query: 147 DEASRLLELMIQIG--VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           DEA  LLE M++    V+PN   +N+++ G C  GR+ +A ++   ME  GC  N+ +Y+
Sbjct: 307 DEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYN 366

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +LI G  +  ++  A+ L  EM S G++PD   Y+ L  G  ++ QV+RA  L   M+  
Sbjct: 367 LLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+  + + Y   +  +C+ G +  A  LF  +    + LD+ AY+ +I G CK+G LK A
Sbjct: 427 GIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTA 485

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            EL +S+    L  D VTY+I+I+     G M+ A  +   M A
Sbjct: 486 KELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTA 529



 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 188/354 (53%), Gaps = 5/354 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  +YNT++  LCR GH   A  L   M+    E    C+PN V+YT ++  LC +   D
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSL---EPHPACRPNAVSYTVLMRALCADRLAD 132

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  L   M+   +  +VVTY +LI G C A + ++A  L  EM + G++PNVV ++ ++
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
              CK+G+ ++  ++   M + G+ P+  +Y  L+D  C  G+  +A  +   M   G +
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE 252

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +Y++LIN  CK   ++ A+ +  +M  KG+ PDVV YNTL  GL ++ +++ A  L
Sbjct: 253 PNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWL 312

Query: 258 FDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +EM R    V  +   + + I GLC  G + +A ++   +      +++  YN LI GL
Sbjct: 313 LEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGL 372

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  +++ A EL   +    L  D  TY+I+I   C   ++D+A DL   M  +
Sbjct: 373 LRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR 426



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/370 (32%), Positives = 195/370 (52%), Gaps = 9/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +   +F+++   G EP+V  Y  LI+ LC+ G    A  + + M     E      PN V
Sbjct: 203 DVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLE------PNVV 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+ +CKEG V +A  +  KM ++ + P+VVTYN+LI G     + +EA  L  EM
Sbjct: 257 TYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM 316

Query: 122 MDQG--VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +     V+PNVV+FN ++  LC  G+M +A ++  +M + G   N   YN L+ G     
Sbjct: 317 VRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVH 376

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V +A EL   M S+G + + F+YSILI G+CK  +++ A  L S M  +GI+P++  Y 
Sbjct: 377 KVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYI 436

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L + + E   +ERA  LF+EM  +    D  AY T I G CK G +  A EL +++   
Sbjct: 437 PLLVAMCEQGMMERARNLFNEMD-NNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDE 495

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   Y+ +I+   KSG ++ A  + + +     + DV  ++ +I      G+++K 
Sbjct: 496 GLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKV 555

Query: 360 RDLFLDMEAK 369
            +L  +M  K
Sbjct: 556 LELIREMITK 565



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 159/331 (48%), Gaps = 8/331 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G  P+V TYNTLI GL        A+ L EEM  G      + KPN V
Sbjct: 273 EAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKN----IVKPNVV 328

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++I GLC  G + +A ++   M++     N+VTYN LI G    +   +A  L  EM
Sbjct: 329 TFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEM 388

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++P+  ++++++   CK  ++D A  LL  M   G+ P  F Y  L+   C  G +
Sbjct: 389 TSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMM 448

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA  LF  M++     +V +YS +I+G CK  +++ A  L   ++ +G+ PD V Y+ +
Sbjct: 449 ERARNLFNEMDN-NFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIV 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +   +E A  +  +M   G   D   + + I G    G I + +EL R +     
Sbjct: 508 INMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNI 567

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            LD +  + L   L  S   K    L +SLP
Sbjct: 568 ALDSKIISTLSTSLVASNEGK---ALLQSLP 595



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 117/227 (51%), Gaps = 6/227 (2%)

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME---SMGCKHNVFS 202
           + EA+ LL+ +  +    +A  YNT++   C  G  +RA  L  +M       C+ N  S
Sbjct: 61  LGEATSLLDALPSV---RDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVS 117

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y++L+   C ++  + A+ L   M S G++ DVV Y TL  GL +  +V++A +L  EM 
Sbjct: 118 YTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMC 177

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G+  +   Y + + G CK+G   +  ++F  +     E D+  Y  LID LCK G+ K
Sbjct: 178 ESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAK 237

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  +   + R  L  +VVTYN++I+ +C +G + +A  +   M  K
Sbjct: 238 KAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEK 284


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/371 (34%), Positives = 194/371 (52%), Gaps = 11/371 (2%)

Query: 2   EAAALFMKL-RVFGCE-PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +A +LF ++ R + C  P+  TYNTL+NG C+      A  LFE M  G       C+PN
Sbjct: 130 KAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGD-----CRPN 184

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTY+ +ID  CK G V +   L  +M+ E +  +V  Y+SLI  FC   D    + LF 
Sbjct: 185 LVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFD 244

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ + V PNVV+++ +M  L + G+  EAS +L+ M   GVRP+   Y  L DG C  G
Sbjct: 245 EMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNG 304

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R   A ++   M   G +    +Y++++NG CK   ++ A  +   M+ KG KPD V YN
Sbjct: 305 RAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYN 364

Query: 240 TLFIGLF---EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           TL  GL    +IH+    +KL    + H V  D +     I GLCK G + +A  +  ++
Sbjct: 365 TLLKGLCGAGKIHEAMDLWKLLLSEKFH-VKPDVFTCNNLIQGLCKEGRVHDAARIHSSM 423

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
             +  + +I  YN LI+G   + +L  A +L++         + +TY++MI+ LC    +
Sbjct: 424 VEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQML 483

Query: 357 DKARDLFLDME 367
             AR LF  M+
Sbjct: 484 SVARGLFCKMK 494



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/438 (27%), Positives = 205/438 (46%), Gaps = 79/438 (18%)

Query: 2   EAAALFMKLRVFG-CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EA  LF  ++  G C PN+ TY+ LI+  C++G     L L EEM           K + 
Sbjct: 167 EARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREG------LKADV 220

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y+++I   C EG ++  +ELF +M    ++PNVVTY+ L+ G      W EA  +  +
Sbjct: 221 FVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKD 280

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGK----------------------------------- 145
           M  +GV+P+VV++ V+ + LCKNG+                                   
Sbjct: 281 MTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDR 340

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLM--------------------------------- 172
           MD+A  ++E+M++ G +P+A  YNTL+                                 
Sbjct: 341 MDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTC 400

Query: 173 ----DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
                G C  GRV+ A  +  SM  MG + N+ +Y+ LI GY   +++  AL L+   + 
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G  P+ + Y+ +  GL ++  +  A  LF +M+  G+      Y   +  LC+   + +
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  LF+ +R + + +D+ ++N +IDG  K+G +K A EL   +    L+ D VT++I+I+
Sbjct: 521 ARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILIN 580

Query: 349 ALCADGKMDKARDLFLDM 366
                G +D+A  L+  M
Sbjct: 581 RFSKLGMLDEAMGLYEKM 598



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 183/370 (49%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ +   +   G  P+V  Y  L +GLC+ G    A+ + + M     E      P T+
Sbjct: 273 EASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEE------PGTL 326

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCKE  +D A  +   M  +   P+ VTYN+L+ G C A   +EA  L+  +
Sbjct: 327 TYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386

Query: 122 MDQG--VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           + +   V+P+V + N ++  LCK G++ +A+R+   M+++G++ N   YN L++G+    
Sbjct: 387 LSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAAR 446

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  A +L+      G   N  +YS++ING CK + +  A  L+ +M   GI+P V+ YN
Sbjct: 447 KLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYN 506

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L   L     +E+A  LF EM+      D  ++   IDG  K G +  A EL   + ++
Sbjct: 507 ALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMM 566

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   ++ LI+   K G L  A  L+  +     +  VV ++ ++      G+ +K 
Sbjct: 567 DLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKI 626

Query: 360 RDLFLDMEAK 369
             L   M  K
Sbjct: 627 ISLLHQMADK 636



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 156/305 (51%), Gaps = 3/305 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+    +T+ID L K    D    ++ KM    + P   + ++L   F   +  + A  +
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ--IGVRPNAFVYNTLMDGF 175
              M  +G   NV + N+++   C++G+ D+A  L   M +    V P+   YNTL++GF
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 176 CLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           C   R+  A  LF +M+  G C+ N+ +YS+LI+ YCK+ E+   L L  EM  +G+K D
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V +Y++L         +E   +LFDEM R  V+ +   Y   + GL + G   EA E+ +
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       D+ AY  L DGLCK+GR   A ++   + +       +TYN++++ LC + 
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339

Query: 355 KMDKA 359
           +MD A
Sbjct: 340 RMDDA 344



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/340 (26%), Positives = 161/340 (47%), Gaps = 8/340 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP   TYN ++NGLC+      A  + E M           KP+ VTY T++ GLC  
Sbjct: 320 GEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGK------KPDAVTYNTLLKGLCGA 373

Query: 74  GFVDKAKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           G + +A +L+  +  E  ++ P+V T N+LI G C     ++A  +   M++ G+Q N+V
Sbjct: 374 GKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIV 433

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++N ++       K+ EA +L +  ++ G  PN+  Y+ +++G C    ++ A  LF  M
Sbjct: 434 TYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKM 493

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           +  G +  V  Y+ L+   C+   +E A SL+ EM +     DVV +N +  G  +   V
Sbjct: 494 KDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDV 553

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           + A +L  EM    +  D   +   I+   K G + EA+ L+  +    +   +  ++ L
Sbjct: 554 KSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSL 613

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           + G    G  +    L   +    ++ D    + ++  LC
Sbjct: 614 LKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLC 653



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 150/307 (48%), Gaps = 4/307 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+  TYNTL+ GLC  G    A++L++ + +   +F V  KP+  T   +I GLCKE
Sbjct: 355 GKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSE--KFHV--KPDVFTCNNLIQGLCKE 410

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A  +   M +  +  N+VTYN LI G+  A    EA  L+   ++ G  PN +++
Sbjct: 411 GRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTY 470

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +V++N LCK   +  A  L   M   G+RP    YN LM   C    + +A  LF  M +
Sbjct: 471 SVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRN 530

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +    +V S++I+I+G  K  +++ A  L SEM    + PD V ++ L     ++  ++ 
Sbjct: 531 VNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDE 590

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L+++M   G       + + + G    G   + + L   +      LD +  + ++ 
Sbjct: 591 AMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILA 650

Query: 314 GLCKSGR 320
            LC   R
Sbjct: 651 CLCHMSR 657



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 9/252 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+      G  PN  TY+ +INGLC+     VA  LF +M +         +P  
Sbjct: 449 IEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSG------IRPTV 502

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  ++  LC+E  +++A+ LF +M++ N N +VV++N +I G   A D   AK L  E
Sbjct: 503 IDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSE 562

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    + P+ V+F++++N   K G +DEA  L E M+  G  P   V+++L+ G+ L G 
Sbjct: 563 MFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGE 622

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYC---KNKEIEGALSLYSEMLSKGIKPDVVI 237
             +   L   M       +    S ++   C   +N ++E  L  +S+      K   + 
Sbjct: 623 TEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQSEHTSKGTTIK 682

Query: 238 YNTLFIGLFEIH 249
            + L + L   H
Sbjct: 683 CHELLMRLNNFH 694



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/282 (24%), Positives = 130/282 (46%), Gaps = 5/282 (1%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG--VQPNVVSFNVIMNELCKNGKMDEAS 150
           P  +  NS        +  ++A  LF   +D      P+  + + +++ L K  + D   
Sbjct: 3   PKRLLNNSSSIAHTQPHSLSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVV 62

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            +   M+   V P     + L + F  T   + A  +   M   G   NV++ ++++ G+
Sbjct: 63  SVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGF 122

Query: 211 CKNKEIEGALSLYSEMLSK--GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG-VA 267
           C++ + + A+SL+S+M      + PD V YNTL  G  +  ++  A  LF+ M++ G   
Sbjct: 123 CRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCR 182

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +   Y   ID  CK+G + E + L   +     + D+  Y+ LI   C  G ++   EL
Sbjct: 183 PNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGREL 242

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F  + R  +  +VVTY+ ++  L   G+  +A ++  DM A+
Sbjct: 243 FDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTAR 284


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 110/338 (32%), Positives = 181/338 (53%), Gaps = 6/338 (1%)

Query: 26  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLK 85
           +   C+      A+ L +EM N         KP+ VTY  +I+G+CKEG +D+A +    
Sbjct: 89  VQTTCKESGVGQAMKLLDEMRNKGS------KPDVVTYNVLINGICKEGRLDEAIKFLNN 142

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M      PNV+T+N ++   C    W +A+ L  +M+ +G  P+VV+FN+++N LC+ G 
Sbjct: 143 MPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGL 202

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +  A  +LE M   G  PN+  YN L+ GFC   +++RA E    M S GC  ++ +Y+ 
Sbjct: 203 LGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNT 262

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+   CK+ +++ A+ + +++ SKG  P ++ YNT+  GL ++ + ERA KL DEM+R G
Sbjct: 263 LLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKG 322

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D   Y + + GL + G + EA++ F  L  L    +   YN ++ GLCKS +   A 
Sbjct: 323 LKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAI 382

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +    +          TY I+I  +  +G   +A DL 
Sbjct: 383 DFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLL 420



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 165/307 (53%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           ++  +   CKE  V +A +L  +M+++   P+VVTYN LI+G C     +EA      M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G QPNV++ N+I+  +C  G+  +A +LL  M++ G  P+   +N L++  C  G + 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           RA ++   M   GC  N  SY+ L++G+CK K+++ A+     M+S+G  PD+V YNTL 
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  +V+ A ++ +++   G +     Y T IDGL K G    A++L   +R    +
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            DI  Y+ L+ GL + G++  A + F  L    +  + +TYN ++  LC   + D+A D 
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 363 FLDMEAK 369
              M +K
Sbjct: 385 LAYMISK 391



 Score =  181 bits (459), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 175/336 (52%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  G +P+V TYN LING+C+ G    A+     M +    +G  C+PN +
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPS----YG--CQPNVI 153

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  I+  +C  G    A++L   M  +  +P+VVT+N LI+  C       A  +  +M
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N +++  CK  KMD A   L++M+  G  P+   YNTL+   C  G+V
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+   + S GC   + +Y+ +I+G  K  + E A+ L  EM  KG+KPD++ Y++L
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 333

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +V+ A K F +++  G+  +   Y + + GLCK+     A++    +   + 
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRC 393

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
           +     Y  LI+G+   G  K A +L   L  RG++
Sbjct: 394 KPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 144/272 (52%), Gaps = 6/272 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   GC P+V T+N LIN LCR G    A+++ E+M          C PN+
Sbjct: 169 MDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG------CTPNS 222

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G CKE  +D+A E    M      P++VTYN+L+   C     + A  +  +
Sbjct: 223 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 282

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK + A +LL+ M + G++P+   Y++L+ G    G+
Sbjct: 283 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 342

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A + F  +E +G + N  +Y+ ++ G CK+++ + A+   + M+SK  KP    Y  
Sbjct: 343 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 402

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           L  G+      + A  L +E+   G+   + A
Sbjct: 403 LIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L +++ + GC P+V +Y+T+ING C+ G     L L EEM           KPN 
Sbjct: 270 VEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKG------LKPNP 323

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I  LCK G V +A+ +  +M  E I P+ V Y +LI GFC   + + A  LF E
Sbjct: 324 YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDE 383

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + + P+ +++  ++  LC+ G++ EA +L   M+   + P+   Y  L+DG+C  G+
Sbjct: 384 MQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGK 443

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  L   M  MG   N+ +Y+ L +G CK  E++ A  L  EM  KG++ ++  YN+
Sbjct: 444 MKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNS 503

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +   +++A KL  +M+  G   D   Y T +D  CK+  +V A EL R +   +
Sbjct: 504 LVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +  +  +N L++G C SG L+   +L + +    ++ +  TYN +I   C    M    
Sbjct: 564 LQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATT 623

Query: 361 DLFLDMEAK 369
           +++  M AK
Sbjct: 624 EIYRGMCAK 632



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 193/361 (53%), Gaps = 6/361 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F++    G   N  +YN + + LC+ G  + A  L  +M          C P+ ++
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRG------CIPDVIS 290

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T+I+G C+ G + +  +L  +M+ + + PN  TYN +I   C      EA+ +  EM+
Sbjct: 291 YSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMI 350

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ V +  +++  CK G +  A RL + M +  + P+   Y  ++ G C TGRV 
Sbjct: 351 SEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVM 410

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++LF  M     + +  +Y+ LI+GYCK  +++ A SL+++ML  G+ P++V Y  L 
Sbjct: 411 EADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALA 470

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  +V+ A +L  EM R G+  + + Y + ++GLCK G I +AV+L + + +  + 
Sbjct: 471 DGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFH 530

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y  L+D  CKS  +  A EL R +    L   VVT+N++++  C  G ++    L
Sbjct: 531 PDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKL 590

Query: 363 F 363
            
Sbjct: 591 L 591



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G  P+   Y TLI+G C+ G+   A  LF+EM            P+ +
Sbjct: 341 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK------ISPDFI 394

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I GLC+ G V +A +LF +M  + + P+ VTY +LI G+C      EA  L  +M
Sbjct: 395 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 454

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN+V++  + + LCK G++D A+ LL  M + G+  N + YN+L++G C  G +
Sbjct: 455 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 514

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A +L   ME  G   +  +Y+ L++ YCK++E+  A  L  +ML + ++P VV +N L
Sbjct: 515 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 574

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      +E   KL   M   G+  +   Y + I   C    +    E++R +     
Sbjct: 575 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 634

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN LI G CK+  +K AW L R +        V +YN +I       K  +AR+
Sbjct: 635 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 694

Query: 362 LFLDM 366
           LF  M
Sbjct: 695 LFEQM 699



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/363 (34%), Positives = 185/363 (50%), Gaps = 12/363 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PN 59
           A  LF +++     P+  TY  +I GLC+TG  + A  LF EM         VCK   P+
Sbjct: 377 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM---------VCKRLEPD 427

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTYT +IDG CKEG + +A  L  +M    + PN+VTY +L  G C   + + A  L  
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G++ N+ ++N ++N LCK G +D+A +L++ M   G  P+A  Y TLMD +C + 
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            + RA EL   M     +  V ++++L+NG+C +  +E    L   ML KGI P+   YN
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L       + +    +++  M   GV  D   Y   I G CK   + EA  L R +   
Sbjct: 608 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 667

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            + L + +YN LI G  K  +   A ELF  + R  L+AD   YNI       +GKM+  
Sbjct: 668 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELT 727

Query: 360 RDL 362
            +L
Sbjct: 728 LEL 730



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 168/344 (48%), Gaps = 6/344 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  LF ++     EP+  TY  LI+G C+ G    A +L  +M     + G+   PN 
Sbjct: 410 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML----QMGLT--PNI 463

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT + DGLCK G VD A EL  +M  + +  N+ TYNSL++G C A + ++A  L  +
Sbjct: 464 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 523

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ V++  +M+  CK+ +M  A  LL  M+   ++P    +N LM+GFC++G 
Sbjct: 524 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 583

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +   E+L   M   G   N  +Y+ LI  YC    +     +Y  M +KG+ PD   YN 
Sbjct: 584 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 643

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   ++ A+ L  +M   G      +Y   I G  K    +EA ELF  +R   
Sbjct: 644 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 703

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              D   YN   D     G++++  EL        L+ D+ T N
Sbjct: 704 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 747



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 172/356 (48%), Gaps = 9/356 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV-VCKPNTVTYTTIIDGLC 71
           +G +P VF  +     L   G    A  LF++M N      V  C       +  +DG  
Sbjct: 178 WGSDPRVF--DIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDG-- 233

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
               +  A ++F++  +  +  N  +YN + H  C      EA  L ++M  +G  P+V+
Sbjct: 234 ----IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVI 289

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           S++ ++N  C+ G++    +L+E M   G++PN + YN ++   C TG+V  AE +   M
Sbjct: 290 SYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM 349

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            S G   +   Y+ LI+G+CK   +  A  L+ EM  + I PD + Y  +  GL +  +V
Sbjct: 350 ISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRV 409

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             A KLF EM    +  D   Y   IDG CK G + EA  L   +  +    +I  Y  L
Sbjct: 410 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTAL 469

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            DGLCK G +  A EL   + R  L  ++ TYN +++ LC  G +D+A  L  DME
Sbjct: 470 ADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDME 525



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 6/239 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   + V G  P+  TY TL++  C++   + A  L  +M +         +P  V
Sbjct: 516 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE------LQPTVV 569

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++G C  G ++  ++L   M ++ I PN  TYNSLI  +C  N+      ++  M
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+  ++N+++   CK   M EA  L   M+  G       YN L+ GF    + 
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 689

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             A ELF  M   G   +   Y+I  +      ++E  L L  E + K +  D+   NT
Sbjct: 690 LEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/288 (23%), Positives = 121/288 (42%), Gaps = 53/288 (18%)

Query: 86  MKDENINPNV---VTYNSLIHGFCYA-NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           ++D  +NPN+   V++   +    Y   DW             G  P V  F++    L 
Sbjct: 149 IQDFWVNPNLDVGVSFGHFVEQLIYTYKDW-------------GSDPRV--FDIFFQVLV 193

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           + G +DEA +L + M+  G                          L +S++S  C   + 
Sbjct: 194 EAGMLDEARKLFDKMLNYG--------------------------LLISVDS--CNLFIS 225

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
             S  ++G      I+ AL ++ E    G+  +   YN +   L ++ +V  A +L  +M
Sbjct: 226 HLSEDLDG------IKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQM 279

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           +  G   D  +Y T I+G C+ G +   ++L   ++I   + +   YN +I  LCK+G++
Sbjct: 280 ELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKV 339

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             A  + R +    +  D V Y  +I   C  G +  A  LF +M+ +
Sbjct: 340 AEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKR 387


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 196/364 (53%), Gaps = 6/364 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  ++   G  PN++T+   I  L R G    A  + + M +        C P+ VTYT
Sbjct: 248 GLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAG------CGPDVVTYT 301

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +ID LC  G ++ AKELFLKMK  +  P+ VTY +L+  F    D +  K  + EM   
Sbjct: 302 VLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEAD 361

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+VV+F ++++ LCK GK+DEA   L++M + GV PN   YNTL+ G     R++ A
Sbjct: 362 GYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEA 421

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ELF SMES+G +   ++Y + I+ Y K+ E   A+  + +M + GI P++V  N     
Sbjct: 422 LELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYS 481

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L E  ++E A + F+ +++ G+A D   Y   +    K G + +A++L   +     + +
Sbjct: 482 LAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPE 541

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +   N LID L K+ R+  AW++F+ +    L   VVTYN ++  L  +G++ +A  LF 
Sbjct: 542 VVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFK 601

Query: 365 DMEA 368
            M A
Sbjct: 602 GMIA 605



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 177/335 (52%), Gaps = 7/335 (2%)

Query: 1    MEAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
            ++A  +F+KL + F   P++  YN+LI+GL +   T +A  LF +M N        C P+
Sbjct: 769  VDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAG------CTPD 822

Query: 60   TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
              TY   +D L K G + +  +L+ +M      PN +T+N +I G   +N  ++A  L+ 
Sbjct: 823  VFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYY 882

Query: 120  EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            ++M     P   ++  +++ L K G+++EA +  E M+  G  PN  +YN LM+GF   G
Sbjct: 883  DLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQG 942

Query: 180  RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
             V  A ELF  M   G + ++ SYSI+++  C   +++ AL  + E+   G+ PD+V YN
Sbjct: 943  DVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYN 1002

Query: 240  TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
             +  GL    +VE A  LFDEM+  G+  D + Y   I  L   G + EA +++  L++ 
Sbjct: 1003 LMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062

Query: 300  KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
              E ++  YN LI G   SG    A+ +++ +  G
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVG 1097



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 192/395 (48%), Gaps = 29/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  +  ++   GC P+V TY  LI+ LC  G    A  LF +M                
Sbjct: 280 EAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLL 339

Query: 47  ---NGNGEFGVVCK-----------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              + +G+   + +           P+ VT+T +ID LCK G VD+A      MK + + 
Sbjct: 340 DKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVA 399

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN+ TYN+LI G    N  +EA  LF  M   G++    ++ + ++   K+G+  +A + 
Sbjct: 400 PNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKT 459

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E M   G+ PN    N  +      GR+  A+E F  ++  G   +  +Y+IL+  Y K
Sbjct: 460 FEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGK 519

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A+ L SEM   G  P+VVI N+L   L++  +V+ A+K+F  M+   +A     
Sbjct: 520 AGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVT 579

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T + GL K G + EA  LF+ +       +  ++N L+D LCK+G + +A ++   + 
Sbjct: 580 YNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMT 639

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                 DV+TYN +I+ L  + +++ A  LF  M+
Sbjct: 640 EMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMK 674



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 183/366 (50%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G   N ++Y  LI+ L ++G    AL ++  M +         KP+  
Sbjct: 175 EAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEG------IKPSLK 228

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ ++  L K   ++    L  +M+   + PN+ T+   I     A   +EA  +   M
Sbjct: 229 TYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRM 288

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G  P+VV++ V+++ LC  GK++ A  L   M     +P+   Y TL+D F   G +
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL 348

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  +E +  ME+ G   +V +++ILI+  CK  +++ A      M  +G+ P++  YNTL
Sbjct: 349 DAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  +++++ A +LF+ M+  G+    + Y  FID   K+G   +A++ F  ++    
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I A N  +  L + GRL+ A E F  L +  L  D +TYNI++      G++D A  
Sbjct: 469 VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIK 528

Query: 362 LFLDME 367
           L  +ME
Sbjct: 529 LLSEME 534



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 171/342 (50%), Gaps = 5/342 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
            L+  LC+ G  + A N+F ++            P+   Y ++IDGL K    + A  LF 
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKS-----FCITPSLEAYNSLIDGLLKARLTEMAWGLFY 812

Query: 85   KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
            KMK+    P+V TYN  +     +    E   L+ EM+ +G +PN ++ N+++  L K+ 
Sbjct: 813  KMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSN 872

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             +D+A  L   ++     P  + Y  L+DG    GR+  A++ F  M   GC  N   Y+
Sbjct: 873  SLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYN 932

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            IL+NG+ K  ++E A  L+  M+ +GI+PD+  Y+ +   L  + +V+ A   F+E++  
Sbjct: 933  ILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLS 992

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            G+  D   Y   I+GL ++  + EA+ LF  +R      D+  YN LI  L  +G ++ A
Sbjct: 993  GLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEA 1052

Query: 325  WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             +++  L    L  +V TYN +I      G  D+A  ++  M
Sbjct: 1053 GKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 198/403 (49%), Gaps = 44/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF  +    C PN  ++NTL++ LC+ G   +AL +   M   N      C P+ +
Sbjct: 595 EATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMN------CFPDVL 648

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG----------FCYANDW 111
           TY T+I GL KE  V+ A  LF +MK + I P+ VT  +L+ G          F  A ++
Sbjct: 649 TYNTVIYGLIKENRVNYAFWLFHQMK-KVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEF 707

Query: 112 -----NEAKCLFIEMMDQGV-------QPNVVSFNVIMNE--------------LCKNGK 145
                + A   F E +  G+       Q  + + +++ N               LCK+GK
Sbjct: 708 VHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGK 767

Query: 146 -MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            +D  +  L+L     + P+   YN+L+DG         A  LF  M++ GC  +VF+Y+
Sbjct: 768 AVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYN 827

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           + ++   K+ +I+    LY EML +G KP+ + +N +  GL + + +++A  L+ ++   
Sbjct: 828 LFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSG 887

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
             +   W Y   IDGL K G + EA + F  +       +   YN L++G  K G ++ A
Sbjct: 888 DFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETA 947

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            ELFR + +  +  D+ +Y+IM+  LC  GK+D A   F +++
Sbjct: 948 CELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELK 990



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/306 (30%), Positives = 147/306 (48%), Gaps = 41/306 (13%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  LF K++  GC P+VFTYN  ++ L ++G      +L+EEM          CKPNT+T
Sbjct: 807  AWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRG------CKPNTIT 860

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +  +I GL K   +DKA +L+  +   + +P   TY  LI G        EAK  F EM+
Sbjct: 861  HNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEML 920

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            D G  PN   +N++MN   K G ++ A  L   M++ G+RP+   Y+ ++D  C+ G+V+
Sbjct: 921  DYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVD 980

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD-------- 234
             A   F  ++  G   ++  Y+++ING  +++ +E ALSL+ EM ++GI PD        
Sbjct: 981  DALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALI 1040

Query: 235  ---------------------------VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                                       V  YN L  G       +RA+ ++ +M   G  
Sbjct: 1041 LNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCR 1100

Query: 268  ADTWAY 273
             +T  +
Sbjct: 1101 PNTGTF 1106



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 165/317 (52%), Gaps = 2/317 (0%)

Query: 54   VVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWN 112
             +C+ ++V    ++  LCK G    A  +FLK+ K   I P++  YNSLI G   A    
Sbjct: 747  TICEDDSV-LIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTE 805

Query: 113  EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
             A  LF +M + G  P+V ++N+ ++ L K+GK+ E   L E M+  G +PN   +N ++
Sbjct: 806  MAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVI 865

Query: 173  DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             G   +  +++A +L+  + S       ++Y  LI+G  K   +E A   + EML  G  
Sbjct: 866  FGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCM 925

Query: 233  PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            P+  +YN L  G  +   VE A +LF  M + G+  D  +Y   +D LC  G + +A+  
Sbjct: 926  PNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHY 985

Query: 293  FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
            F  L++   + D+  YN +I+GL +S R++ A  LF  +    +  D+ TYN +I  L  
Sbjct: 986  FEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGI 1045

Query: 353  DGKMDKARDLFLDMEAK 369
             G +++A  ++ +++ K
Sbjct: 1046 AGMVEEAGKMYEELQLK 1062



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/373 (25%), Positives = 168/373 (45%), Gaps = 54/373 (14%)

Query: 31  RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           R    +V  NL ++          + K +  TY TI   L   G + +A     KM+   
Sbjct: 137 RVEDMVVVFNLMQKQ---------IIKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVG 187

Query: 91  INPNVVTYNSLIH-----GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
              N  +Y  LIH     GFC      EA  ++  M+ +G++P++ +++ +M  L K   
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFC-----REALKVYRRMVSEGIKPSLKTYSALMVALGKRRD 242

Query: 146 MDEASRLLELMIQIGVRPNAF-----------------------------------VYNT 170
           ++    LL+ M  +G+RPN +                                    Y  
Sbjct: 243 IETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTV 302

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+D  C  G++N A+ELF+ M++   K +  +Y  L++ +  + +++     +SEM + G
Sbjct: 303 LIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADG 362

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             PDVV +  L   L ++ +V+ AF   D M++ GVA +   Y T I GL +   + EA+
Sbjct: 363 YLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEAL 422

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           ELF ++  L  E     Y   ID   KSG    A + F  +    ++ ++V  N  +++L
Sbjct: 423 ELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSL 482

Query: 351 CADGKMDKARDLF 363
              G++++A++ F
Sbjct: 483 AEQGRLEEAKEFF 495



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 128/240 (53%), Gaps = 6/240 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  L+  L      P  +TY  LI+GL + G    A   FEEM     ++G  C PN  
Sbjct: 876  KAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEML----DYG--CMPNCP 929

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             Y  +++G  K+G V+ A ELF +M  E I P++ +Y+ ++   C     ++A   F E+
Sbjct: 930  LYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL 989

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               G+ P++V +N+++N L ++ +++EA  L + M   G+ P+ + YN L+    + G V
Sbjct: 990  KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMV 1049

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              A +++  ++  G + NVF+Y+ LI G+  +   + A ++Y +M+  G +P+   +  L
Sbjct: 1050 EEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 110/207 (53%), Gaps = 6/207 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA   F ++  +GC PN   YN L+NG  + G    A  LF  M           +P+  
Sbjct: 911  EAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEG------IRPDLK 964

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +Y+ ++D LC  G VD A   F ++K   ++P++V YN +I+G   +    EA  LF EM
Sbjct: 965  SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P++ ++N ++  L   G ++EA ++ E +   G+ PN F YN L+ G  ++G  
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNP 1084

Query: 182  NRAEELFVSMESMGCKHNVFSYSILIN 208
            +RA  ++  M   GC+ N  +++ L N
Sbjct: 1085 DRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/264 (25%), Positives = 120/264 (45%), Gaps = 7/264 (2%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVV----SFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           +D N+A   F  + +    P V+    + N ++  L  + ++++   +  LM +  ++ +
Sbjct: 100 SDPNQAFSFFNSVAEM---PRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRS 156

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              Y T+     + G +  A      M  +G   N +SY  LI+   K+     AL +Y 
Sbjct: 157 INTYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYR 216

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            M+S+GIKP +  Y+ L + L +   +E    L  EM+  G+  + + +   I  L + G
Sbjct: 217 RMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAG 276

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            I EA  + + +       D+  Y  LID LC +G+L  A ELF  +       D VTY 
Sbjct: 277 KIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYI 336

Query: 345 IMIHALCADGKMDKARDLFLDMEA 368
            ++      G +D  ++ + +MEA
Sbjct: 337 TLLDKFSDHGDLDAIKEFWSEMEA 360



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 6/138 (4%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A   F +L++ G +P++  YN +INGL R+     AL+LF+EM N          P+  
Sbjct: 981  DALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRG------ITPDLY 1034

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY  +I  L   G V++A +++ +++ + + PNV TYN+LI G   + + + A  ++ +M
Sbjct: 1035 TYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKM 1094

Query: 122  MDQGVQPNVVSFNVIMNE 139
            M  G +PN  +F  + N+
Sbjct: 1095 MVGGCRPNTGTFAQLPNQ 1112


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 198/404 (49%), Gaps = 48/404 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLIN---------------------------------- 27
           EA  +F ++  + CEP++F+YN ++N                                  
Sbjct: 94  EAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRI 153

Query: 28  -GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
              CRT   + AL L   M +        C+ N V Y T+I G  +E +  +A ELF KM
Sbjct: 154 KSFCRTKRPLAALRLLNNMPSQG------CELNAVVYCTVISGFYEENYQVEAYELFNKM 207

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG-- 144
               I P++ T+N L+H  C      E + L  +++  GV PN+ +FN+ +  LC+ G  
Sbjct: 208 LRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVL 267

Query: 145 -----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
                K+ EA   L  M+  G+ P+ F YNT++ G+   G++  A  +    +  G   +
Sbjct: 268 EGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPD 327

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
            F+Y  LI G C++ +I+ AL+L+ E L KG+KP +V+YNTL  GL +   V +A +L +
Sbjct: 328 EFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMN 387

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M + G++ D W Y   I+GLCK G + +A  L        Y  DI  +N LIDG CK  
Sbjct: 388 DMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRL 447

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++  A  +  S+    +  DV+TYN +++ LC   K +   + F
Sbjct: 448 KMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETF 491



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/376 (31%), Positives = 191/376 (50%), Gaps = 14/376 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-------HTIVALNLFEEMANGNGEFGV 54
           E   L  K+   G  PN+FT+N  I GLCR G         + A N   +M N   E   
Sbjct: 234 EGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLE--- 290

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
              P+  TY TII G  K G +  A  +    K +   P+  TY SLI G C   D + A
Sbjct: 291 ---PDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHA 347

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             LF E + +G++P++V +N ++  L + G + +A +L+  M + G+ P+ + YN +++G
Sbjct: 348 LALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVING 407

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C  G V+ A  L  +  + G   ++F+++ LI+GYCK  +++ A+ +   M S G+ PD
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V+ YN++  GL +  + E   + F  +   G   +   Y   I+ LCK   + EA++L  
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLE 527

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV-TYNIMIHALCAD 353
            +R      D  ++  +I G C +G L  A++LFR + +   I   V TYNIMI+A    
Sbjct: 528 EIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEK 587

Query: 354 GKMDKARDLFLDMEAK 369
             MD A+ LF +M  K
Sbjct: 588 LDMDMAQKLFHEMGDK 603



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 193/367 (52%), Gaps = 11/367 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPN 59
           +EA     K+   G EP+ FTYNT+I G  + G    A  + ++      +F G V  P+
Sbjct: 275 VEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKD-----AKFKGFV--PD 327

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY ++I G+C++G +D A  LF +   + + P++V YN+LI G        +A  L  
Sbjct: 328 EFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMN 387

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M  +G+ P++ ++N+++N LCK G + +A+ LL   I  G  P+ F +NTL+DG+C   
Sbjct: 388 DMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRL 447

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +++ A  +  SM S G   +V +Y+ ++NG CK  + E  +  +  ++ KG  P+++ YN
Sbjct: 448 KMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYN 507

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L   L +  +V  A  L +E++  G+  D  ++ T I G C NG + EA +LFR +   
Sbjct: 508 ILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRME-Q 566

Query: 300 KYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +Y +   +  YN +I+   +   + +A +LF  +       D  TY +MI   C  G ++
Sbjct: 567 QYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVN 626

Query: 358 KARDLFL 364
              D  L
Sbjct: 627 SGYDFLL 633



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/377 (29%), Positives = 197/377 (52%), Gaps = 15/377 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPN 59
           +EA  LF K+   G  P++ T+N L++ LC+ GH      L  + + NG      VC PN
Sbjct: 198 VEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNG------VC-PN 250

Query: 60  TVTYTTIIDGLCKEGFVD-------KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
             T+   I GLC++G ++       +A+    KM ++ + P+  TYN++I+G+       
Sbjct: 251 LFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQ 310

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A  +  +   +G  P+  ++  ++  +C++G +D A  L E  +  G++P+  +YNTL+
Sbjct: 311 DASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLI 370

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G    G V +A +L   M   G   ++++Y+++ING CK   +  A +L +  ++KG  
Sbjct: 371 KGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYL 430

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PD+  +NTL  G  +  +++ A  + D M  HGV  D   Y + ++GLCK     + +E 
Sbjct: 431 PDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMET 490

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F+ +       +I  YN LI+ LCK+ ++  A +L   +    LI D V++  +I   C 
Sbjct: 491 FKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCN 550

Query: 353 DGKMDKARDLFLDMEAK 369
           +G +D+A  LF  ME +
Sbjct: 551 NGDLDEAYQLFRRMEQQ 567



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 173/350 (49%), Gaps = 13/350 (3%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
            Y + +    R G    A+++FE M   N      C+P+  +Y  I++ L + G+ ++A 
Sbjct: 78  VYVSAMRNYGRKGKVQEAVDVFERMDFYN------CEPSIFSYNAIMNILVEYGYFNQAH 131

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +++L+MK E I P+V T+   I  FC       A  L   M  QG + N V +  +++  
Sbjct: 132 KVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGF 191

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            +     EA  L   M+++G+ P+   +N LM   C  G +   E+L   +   G   N+
Sbjct: 192 YEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNL 251

Query: 201 FSYSILINGYCKNKEIEGALSLYSE-------MLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           F+++I I G C+   +EGA S   E       M++KG++PD   YNT+  G  ++ +++ 
Sbjct: 252 FTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQD 311

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++  + +  G   D + Y + I G+C++G I  A+ LF        +  I  YN LI 
Sbjct: 312 ASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIK 371

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           GL + G +  A +L   + +  +  D+ TYN++I+ LC  G +  A +L 
Sbjct: 372 GLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLL 421



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/291 (30%), Positives = 145/291 (49%), Gaps = 7/291 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L   +   G  P+++TYN +INGLC+ G    A NL       N        P+ 
Sbjct: 380 LKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLL------NAAIAKGYLPDI 433

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+ T+IDG CK   +D A  +   M    + P+V+TYNS+++G C A    +    F  
Sbjct: 434 FTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKM 493

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +M++G  PN++++N+++  LCK  K+ EA  LLE +   G+ P+   + T++ GFC  G 
Sbjct: 494 IMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGD 553

Query: 181 VNRAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ A +LF  ME      H V +Y+I+IN + +  +++ A  L+ EM  KG  PD   Y 
Sbjct: 554 LDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYR 613

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            +  G  ++  V   +    +    G       +   I+ LC    + EAV
Sbjct: 614 VMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAV 664



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 115/225 (51%), Gaps = 7/225 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYN+++NGLC+       +  F+ +          C PN +TY  +I+ LCK 
Sbjct: 463 GVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKG------CLPNIITYNILIESLCKA 516

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVS 132
             V +A +L  ++++  + P+ V++ ++I GFC   D +EA  LF  M  Q  +   V +
Sbjct: 517 RKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVAT 576

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N+++N   +   MD A +L   M   G  P+++ Y  ++DGFC  G VN   +  +   
Sbjct: 577 YNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEI 636

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            +G   ++ ++  +IN  C    +  A+ +   M+  G+ P+ V+
Sbjct: 637 EIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVPEAVV 681



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/246 (25%), Positives = 112/246 (45%), Gaps = 1/246 (0%)

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASR-LLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + G +   +++  ++ +L  +G+ D   R L+E+ + +       VY + M  +   G+V
Sbjct: 33  EDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGVYVSAMRNYGRKGKV 92

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  M+   C+ ++FSY+ ++N   +      A  +Y  M  +GI PDV  +   
Sbjct: 93  QEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIR 152

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                   +   A +L + M   G   +   Y T I G  +  Y VEA ELF  +  L  
Sbjct: 153 IKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGI 212

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              I  +N L+  LCK G L+   +L   + +  +  ++ T+NI I  LC  G ++ A  
Sbjct: 213 FPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANS 272

Query: 362 LFLDME 367
             ++ E
Sbjct: 273 KVVEAE 278


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 191/366 (52%), Gaps = 11/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ + GC P+V T+NT+I G CR    +    L + M            PN +
Sbjct: 263 EALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKG------FTPNDM 316

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC-LFIE 120
           TY  ++ GLCK   +D+A+ L  K+      PNVV +N+L++GF      NEA   ++ +
Sbjct: 317 TYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDK 372

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G  P+V +F+ ++N LCK G    A  L+  M   G +PN   Y  L+DGFC  G+
Sbjct: 373 MINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQ 432

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  +   M + G   N   Y+ LI+  CK+ +I  AL ++ EM SKG KPD+  +N+
Sbjct: 433 LEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNS 492

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL  + ++E A  L+ +M   GV A++  + T I    + G I EA++L   +    
Sbjct: 493 LIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRG 552

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             LD   YN LI  LCK+G ++    LF  + R  L   ++T NI+I+  C  GK+  A 
Sbjct: 553 CPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNAL 612

Query: 361 DLFLDM 366
           +   DM
Sbjct: 613 EFMRDM 618



 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 180/358 (50%), Gaps = 9/358 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  K+      PNV  +NTL+NG  R G    A     +    NG       P+  
Sbjct: 333 EAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYV-----PDVF 383

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++T+++GLCK+G    A EL   M  +   PN+ TY  LI GFC      EA  +  EM
Sbjct: 384 TFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREM 443

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N V +N +++ LCK+GK+ EA  +   M   G +P+ F +N+L+ G C    +
Sbjct: 444 LTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEM 503

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   G   N  +++ LI+ + +  EI+ AL L ++ML +G   D + YN L
Sbjct: 504 EDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGL 563

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   VE+   LF+EM R G+          I+G C  G +  A+E  R +    +
Sbjct: 564 IKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGF 623

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             DI  YN LI+GLCK GR++ A  LF  L    +  D +TYN +I  LC +G  D A
Sbjct: 624 SPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDA 681



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 119/337 (35%), Positives = 181/337 (53%), Gaps = 10/337 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+VFT++TL+NGLC+ G    AL L  +M A G       CKPN  TYT +IDG CK
Sbjct: 377 GYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKG-------CKPNLNTYTILIDGFCK 429

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +G +++A  +  +M  +  + N V YN+LI   C     +EA  +F EM  +G +P++ +
Sbjct: 430 KGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFT 489

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN ++  LC+  +M++A  L   M+  GV  N+  +NTL+  F   G +  A +L   M 
Sbjct: 490 FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML 549

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC  +  +Y+ LI   CK   +E  L L+ EM+ KG+ P ++  N L  G     +V 
Sbjct: 550 FRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVH 609

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +   +M   G + D   Y + I+GLCK G I EA+ LF  L+    + D   YN LI
Sbjct: 610 NALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLI 669

Query: 313 DGLCKSGRLKIA-WELFRSLPRGVLIADVVTYNIMIH 348
             LC+ G    A + L+R +  G +  D VT+NI+++
Sbjct: 670 CWLCREGAFDDACFLLYRGVENGFVPND-VTWNILVY 705



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 160/315 (50%), Gaps = 5/315 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P+  +Y  ++D L        A  +F  M  + ++PN  T+  ++   C  N+ + A 
Sbjct: 171 CEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNAC 230

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M   G  PN + +  +++ L K  ++DEA +LLE M  +G  P+   +NT++ GF
Sbjct: 231 LLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGF 290

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   RV    +L   M   G   N  +Y  L++G CK   I+ A +L    LSK   P+V
Sbjct: 291 CRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQAL----LSKVPGPNV 346

Query: 236 VIYNTLFIGLFEIHQVERAFK-LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V +NTL  G     ++  A   ++D+M  +G   D + + T ++GLCK G    A+EL  
Sbjct: 347 VHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVN 406

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +     + ++  Y  LIDG CK G+L+ A  + R +       + V YN +I ALC  G
Sbjct: 407 DMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHG 466

Query: 355 KMDKARDLFLDMEAK 369
           K+ +A D+F +M +K
Sbjct: 467 KIHEALDMFGEMSSK 481



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 29/253 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM------ANG------- 48
           EA  +F ++   GC+P++FT+N+LI GLCR      AL L+ +M      AN        
Sbjct: 470 EALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLI 529

Query: 49  -----NGEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                 GE               C  + +TY  +I  LCK G V+K   LF +M  + + 
Sbjct: 530 HAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLT 589

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+++T N LI+GFC A   + A     +M+ +G  P++V++N ++N LCK G++ EA  L
Sbjct: 590 PSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNL 649

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E +   G++P++  YNTL+   C  G  + A  L       G   N  +++IL+  + K
Sbjct: 650 FEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709

Query: 213 NKEIEGALSLYSE 225
               EG    Y++
Sbjct: 710 QSNSEGQTITYAQ 722



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 121/290 (41%), Gaps = 41/290 (14%)

Query: 117 LFIEMMDQGV------------------------------------QPNVVSFNVIMNEL 140
           L ++M ++G+                                    +P+  S+NV+++ L
Sbjct: 126 LLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVL 185

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
                   AS +   M+  GV PN + +  +M   C+   V+ A  L   M   GC  N 
Sbjct: 186 VVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNS 245

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
             Y  LI+   K   ++ AL L  EM   G  PDV  +NT+  G   +++V    KL D 
Sbjct: 246 MIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDR 305

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G   +   Y   + GLCK   I EA  L   +       ++  +N L++G  ++GR
Sbjct: 306 MILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGR 361

Query: 321 LKIAWE-LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L  A   ++  +     + DV T++ +++ LC  G    A +L  DM+AK
Sbjct: 362 LNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK 411


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 134/435 (30%), Positives = 206/435 (47%), Gaps = 76/435 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   G +PN+  Y TL++G  + G T  A ++ +EM +     GV  +PN +
Sbjct: 331 EAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISA----GV--QPNKI 384

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I GLCK G + +A +L  +M    + P+  TYN L+ G    +D + A  L  EM
Sbjct: 385 MYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY------------- 168
            + G+ PNV S+ +++N LC+NG+  EA  LLE MI  G++PNAF+Y             
Sbjct: 445 RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNI 504

Query: 169 ----------------------NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                 N+L+ G    GR+  AEE +  ++  G   + F+YS L
Sbjct: 505 SLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGL 564

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER------------- 253
           I+GYCK   +E A  L  +ML+ G+KP+   Y  L  G F+ +  E+             
Sbjct: 565 IHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGD 624

Query: 254 ----------------------AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
                                 AF +  E++++G+  D   Y + I GLCK   + +AV 
Sbjct: 625 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVG 684

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +     E  I  YN LIDG C+SG +  A  +F S+    L+ + VTY  +I   C
Sbjct: 685 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNC 744

Query: 352 ADGKMDKARDLFLDM 366
            +G +  A DL+ +M
Sbjct: 745 KNGDITDAFDLYKEM 759



 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 191/369 (51%), Gaps = 10/369 (2%)

Query: 2   EAAALFMKLRVF----GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           +A  L  KL+ F    G  P+V+TY+T I   C+      A  +FEEM   +      C 
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRD------CA 275

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            N VTY  +I GLC+ G V++A     +M D  ++P+  TY +L++G C  +   EAK L
Sbjct: 276 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKAL 335

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM   G++PN+V +  +++   K GK  EA  +L+ MI  GV+PN  +Y+ L+ G C 
Sbjct: 336 LDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCK 395

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++ RA +L   M  +G + + F+Y+ L+ G+ +  + +GA  L +EM + GI P+V  
Sbjct: 396 IGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYS 455

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  +  GL +  + + A  L +EM   G+  + + Y   I G  K G I  A E    + 
Sbjct: 456 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMT 515

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN LI GL   GR++ A E +  + +  L+ D  TY+ +IH  C  G ++
Sbjct: 516 KANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLE 575

Query: 358 KARDLFLDM 366
           KA  L   M
Sbjct: 576 KADQLLRQM 584



 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 191/364 (52%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++R   C  N  TYN +I+GLCR+G    A    EEM     ++G+   P+  T
Sbjct: 262 AKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAFGFKEEMV----DYGL--SPDAFT 315

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +++GLCK   + +AK L  +M    + PN+V Y +L+ GF       EA  +  EM+
Sbjct: 316 YGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMI 375

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GVQPN + ++ ++  LCK G++  AS+LL+ MI++G+RP+ F YN LM G       +
Sbjct: 376 SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKD 435

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M + G   NV+SY I+ING C+N E + A +L  EM+S+G+KP+  +Y  L 
Sbjct: 436 GAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLI 495

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
           IG  +   +  A +  ++M +  V  D + Y + I GL   G + EA E +  ++     
Sbjct: 496 IGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLV 555

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y+ LI G CK+G L+ A +L R +    L  +  TY  ++         +K   +
Sbjct: 556 PDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSI 615

Query: 363 FLDM 366
              M
Sbjct: 616 LQSM 619



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 191/363 (52%), Gaps = 10/363 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++R  G  PNV++Y  +INGLC+ G +  A NL EEM +         KPN   Y  
Sbjct: 440 LLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEG------LKPNAFMYAP 493

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G  KEG +  A E   KM   N++P++  YNSLI G        EA+  + ++  +G
Sbjct: 494 LIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRG 553

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+  +++ +++  CK G +++A +LL  M+  G++PNA  Y  L++G+  +    +  
Sbjct: 554 LVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVS 613

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +  SM   G K +   Y I+I    +++ +E A  + +E+   G+ PD+ IY++L  GL
Sbjct: 614 SILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGL 673

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +I  +E+A  L DEM + G+      Y   IDG C++G I  A  +F ++       + 
Sbjct: 674 CKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNC 733

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             Y  LIDG CK+G +  A++L++  L RG+   D   YN++    C+D   D  + LFL
Sbjct: 734 VTYTALIDGNCKNGDITDAFDLYKEMLDRGI-APDAFVYNVLATG-CSDAA-DLEQALFL 790

Query: 365 DME 367
             E
Sbjct: 791 TEE 793



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 165/330 (50%), Gaps = 7/330 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   + +++  G  P+ FTY+ LI+G C+TG+   A  L  +M N         KPN  
Sbjct: 541 EAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSG------LKPNAD 594

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++G  K    +K   +   M      P+   Y  +I     + +   A  +  E+
Sbjct: 595 TYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 654

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P++  ++ +++ LCK   M++A  LL+ M + G+ P    YN L+DGFC +G +
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 714

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  +F S+ + G   N  +Y+ LI+G CKN +I  A  LY EML +GI PD  +YN L
Sbjct: 715 SRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVL 774

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +E+A  L +EM   G  A+   + T + G CK G + E  +L   +   + 
Sbjct: 775 ATGCSDAADLEQALFLTEEMFNRGY-ANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREI 833

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
             + +    ++    K+G+L  A  +F  L
Sbjct: 834 VPNAQTVEKVVSEFGKAGKLGEAHRVFAEL 863



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 165/382 (43%), Gaps = 70/382 (18%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKD----------------------------- 88
           P+T     ++D   K G V  A ++ L M D                             
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 89  ------ENINPNVVTYNSLIHGFCYANDWNEAKCLF------------------------ 118
                   I P+V TY++ I   C A D++ AK +F                        
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290

Query: 119 -----------IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
                       EM+D G+ P+  ++  +MN LCK  ++ EA  LL+ M   G++PN  V
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y TL+DGF   G+   A ++   M S G + N   Y  LI G CK  ++  A  L  EM+
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMI 410

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
             G++PD   YN L  G F+ H  + AF+L +EM+  G+  + ++Y   I+GLC+NG   
Sbjct: 411 KVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESK 470

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           EA  L   +     + +   Y  LI G  K G + +A E    + +  +  D+  YN +I
Sbjct: 471 EAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLI 530

Query: 348 HALCADGKMDKARDLFLDMEAK 369
             L   G+M++A + +  ++ +
Sbjct: 531 KGLSTVGRMEEAEEYYAQVQKR 552



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 130/280 (46%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           +  + +P+    + L+  +        A  + + M D G+ P     N ++ +L +   M
Sbjct: 165 RSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAM 224

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           +   +L   M   G+ P+ + Y+T ++  C     + A+++F  M    C  N  +Y+++
Sbjct: 225 ELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVM 284

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C++  +E A     EM+  G+ PD   Y  L  GL +  +++ A  L DEM   G+
Sbjct: 285 ISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGL 344

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +   Y T +DG  K G   EA ++ + +     + +   Y+ LI GLCK G+L  A +
Sbjct: 345 KPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASK 404

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L + + +  L  D  TYN ++         D A +L  +M
Sbjct: 405 LLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/232 (31%), Positives = 113/232 (48%), Gaps = 22/232 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G EP +  YN LI+G CR+G    A N+F+ +       G+V  PN V
Sbjct: 681 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK----GLV--PNCV 734

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDG CK G +  A +L+ +M D  I P+   YN L  G   A D  +A  L  EM
Sbjct: 735 TYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEM 794

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G   NV  FN +++  CK GK+ E  +LL +M+   + PNA     ++  F   G++
Sbjct: 795 FNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKL 853

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             A  +F  ++      +      L               L+++M++KG+ P
Sbjct: 854 GEAHRVFAELQQKKASQSATDRFSL---------------LFTDMINKGLIP 890



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 1/122 (0%)

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           +  ++RA +  D   R   +  T      +D   K G +  A ++   +  L      R 
Sbjct: 152 LASIQRAIQDTDHRSR-SPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRC 210

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            N L+  L ++  +++ W+L   +    ++ DV TY+  I A C     D A+ +F +M 
Sbjct: 211 CNGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMR 270

Query: 368 AK 369
            +
Sbjct: 271 RR 272


>gi|297793693|ref|XP_002864731.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310566|gb|EFH40990.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 732

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/374 (30%), Positives = 200/374 (53%), Gaps = 16/374 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +++ G  PN++TY+ +I+G C+TG+   A  L++E+            PN V
Sbjct: 286 EAEKMFELMKIHGVVPNLYTYSAMIDGYCKTGNLRQAYGLYKEILVAE------LLPNVV 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T++DG CK   +  A+ LF+ M    ++PN+  YN LIHG C + +  EA  L  EM
Sbjct: 340 VFGTLVDGFCKARELVAARSLFVHMVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+V ++ +++N LC   ++ EA+RL + M    + P++  YN+L+ GFC    +
Sbjct: 400 ESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNI 459

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +L   M S G + N+ ++S LI+GYCK + I+ A+ LY EM  KGI PDVV Y TL
Sbjct: 460 EKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTL 519

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-------- 293
               F+   ++ A +L+ +M   G+  +   +   +DG  K G + +A++ +        
Sbjct: 520 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSDAIDFYLENNQAAT 579

Query: 294 -RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
            +++ + +       + CLI+GLC++G +  A   F  +  G +  D+ +Y  M+ A   
Sbjct: 580 GKSI-VQRSCWKYVGFTCLIEGLCQNGYILRASRFFSDMKSGGVTPDIWSYVSMLKAHLR 638

Query: 353 DGKMDKARDLFLDM 366
           + ++     L  DM
Sbjct: 639 EKRITDTMMLHCDM 652



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 189/371 (50%), Gaps = 14/371 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G +PNV+ Y   I  LCR      A  +FE M       GVV  PN  TY+ 
Sbjct: 255 LLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIH----GVV--PNLYTYSA 308

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK G + +A  L+ ++    + PNVV + +L+ GFC A +   A+ LF+ M+  G
Sbjct: 309 MIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFG 368

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN+  +N +++  CK+G M EA  LL  M  + + P+ F Y  L++G C   R+  A 
Sbjct: 369 VDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEAN 428

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF  M++     +  +Y+ LI+G+CK   IE AL L SEM S G++P+++ ++TL  G 
Sbjct: 429 RLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGY 488

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            ++  ++ A  L+ EM   G+  D   Y T ID   K   + EA+ L+  +       + 
Sbjct: 489 CKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPND 548

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT--------YNIMIHALCADGKMD 357
             + CL+DG  K GRL  A + +    +      +V         +  +I  LC +G + 
Sbjct: 549 HTFACLVDGFWKEGRLSDAIDFYLENNQAATGKSIVQRSCWKYVGFTCLIEGLCQNGYIL 608

Query: 358 KARDLFLDMEA 368
           +A   F DM++
Sbjct: 609 RASRFFSDMKS 619



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 172/356 (48%), Gaps = 6/356 (1%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R   C P+      ++NGL R          ++ M +     G+V  P+   Y+ +    
Sbjct: 190 REMRCSPDSKACLAILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYSVLFQCC 243

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            K+GF  K ++L  +M    + PNV  Y   I   C  N   EA+ +F  M   GV PN+
Sbjct: 244 FKQGFPSKKEKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNL 303

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            +++ +++  CK G + +A  L + ++   + PN  V+ TL+DGFC    +  A  LFV 
Sbjct: 304 YTYSAMIDGYCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVH 363

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M   G   N++ Y+ LI+G CK+  +  A+ L SEM S  + PDV  Y  L  GL    +
Sbjct: 364 MVKFGVDPNLYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEER 423

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           +  A +LF  M+   +   +  Y + I G CK   I +A++L   +     E +I  ++ 
Sbjct: 424 LAEANRLFQRMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFST 483

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LIDG CK   +K A  L+  +    ++ DVVTY  +I A   +  M +A  L+ DM
Sbjct: 484 LIDGYCKVRNIKAAMGLYFEMTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDM 539



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 156/315 (49%), Gaps = 2/315 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C P++     I++GL +    D     +  M    + P+V  Y+ L    C+   +   K
Sbjct: 194 CSPDSKACLAILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYSVLFQC-CFKQGFPSKK 252

Query: 116 -CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             L  EM   GV+PNV  + + + +LC+  KM+EA ++ ELM   GV PN + Y+ ++DG
Sbjct: 253 EKLLDEMTSLGVKPNVYIYTIYIRDLCRENKMEEAEKMFELMKIHGVVPNLYTYSAMIDG 312

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +C TG + +A  L+  +       NV  +  L++G+CK +E+  A SL+  M+  G+ P+
Sbjct: 313 YCKTGNLRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVAARSLFVHMVKFGVDPN 372

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           + +YN L  G  +   +  A  L  EM+   ++ D + Y   I+GLC    + EA  LF+
Sbjct: 373 LYVYNCLIHGQCKSGNMLEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQ 432

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++  +       YN LI G CK   ++ A +L   +    +  +++T++ +I   C   
Sbjct: 433 RMKNERIFPSSVTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVR 492

Query: 355 KMDKARDLFLDMEAK 369
            +  A  L+ +M  K
Sbjct: 493 NIKAAMGLYFEMTIK 507



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 163/338 (48%), Gaps = 23/338 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  ++      P+VFTY  LINGLC       A  LF+ M N          P++
Sbjct: 390 LEAMGLLSEMESLNLSPDVFTYTILINGLCTEERLAEANRLFQRMKNER------IFPSS 443

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY ++I G CKE  ++KA +L  +M    + PN++T+++LI G+C   +   A  L+ E
Sbjct: 444 VTYNSLIHGFCKEYNIEKALDLCSEMTSSGVEPNIITFSTLIDGYCKVRNIKAAMGLYFE 503

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ P+VV++  +++   K   M EA RL   M++ G+ PN   +  L+DGF   GR
Sbjct: 504 MTIKGIVPDVVTYTTLIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 563

Query: 181 VNRAEELFV---------SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           ++ A + ++         S+    C   V  ++ LI G C+N  I  A   +S+M S G+
Sbjct: 564 LSDAIDFYLENNQAATGKSIVQRSCWKYV-GFTCLIEGLCQNGYILRASRFFSDMKSGGV 622

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            PD+  Y ++        ++     L  +M + G+  +    +       +NGY+  A  
Sbjct: 623 TPDIWSYVSMLKAHLREKRITDTMMLHCDMIKTGILPNLMVNQLLAMFYQENGYLRSACF 682

Query: 292 LFRTLR---ILKYELD----IRAYNCLIDGLCKSGRLK 322
           L  + R   I K   +    I  ++C + G+C S   K
Sbjct: 683 LTNSSRLGTIFKNTCNSIFLITVFHCKMYGICISSIYK 720


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/364 (31%), Positives = 192/364 (52%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F ++   GC PNV TYNTLI+G C+         L   MA    E      PN ++
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLE------PNLIS 277

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+GLC+EG + +   +  +M     + + VTYN+LI G+C   ++++A  +  EM+
Sbjct: 278 YNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+V+++  +++ +CK G M+ A+  L+ M   G+ PN   Y TL+DGF   G +N
Sbjct: 338 RHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   M   G   +V +Y+ LING+C   ++  A+++  +M  KG+ PDVV Y+T+ 
Sbjct: 398 EAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G    + V+ A ++  +M   G+  DT  Y + I G C+     EA +LF  +  +   
Sbjct: 458 SGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLP 517

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y  LI+  C  G L+ A +L   +    ++ DVVTY+++I+ L    +  +A+ L
Sbjct: 518 PDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRL 577

Query: 363 FLDM 366
            L +
Sbjct: 578 LLKL 581



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 202/372 (54%), Gaps = 21/372 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   G  P+V TY +LI+ +C+ G+   A    ++M         +C PN  
Sbjct: 328 QALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQM-----RVRGLC-PNER 381

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++DG  ++G++++A  +  +M D   +P+VVTYN+LI+G C A    +A  +  +M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDM 441

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+VVS++ +++  C++  +DEA R+   M+  G++P+   Y++L+ GFC   R 
Sbjct: 442 KEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRT 501

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M  +G   + F+Y+ LIN YC   +++ A+ L++EM+ KG+ PDVV Y+ L
Sbjct: 502 KEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVL 561

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID---------------GLCKNGYI 286
             GL +  +   A +L  ++           Y T I+               G C  G +
Sbjct: 562 INGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA ++F ++    ++ D  AYN +I G C+ G ++ A+ L++ + +   +   VT   +
Sbjct: 622 TEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIAL 681

Query: 347 IHALCADGKMDK 358
           +  L  +GK+++
Sbjct: 682 VKTLHKEGKVNE 693



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/316 (28%), Positives = 156/316 (49%), Gaps = 1/316 (0%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNE 113
           +C   +  +  ++    +   +DKA  +    +     P V++YN+++     +  + + 
Sbjct: 129 LCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISF 188

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A+ +F EM+   V PNV ++N+++   C  G +D A R  + M + G  PN   YNTL+D
Sbjct: 189 AENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLID 248

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C   +++   EL  SM   G + N+ SY+++ING C+   ++    + +EM  +G   
Sbjct: 249 GYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSL 308

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           D V YNTL  G  +     +A  +  EM RHG++     Y + I  +CK G +  A E  
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +R+     + R Y  L+DG  + G +  A+ + + +        VVTYN +I+  C  
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428

Query: 354 GKMDKARDLFLDMEAK 369
           GKM  A  +  DM+ K
Sbjct: 429 GKMVDAIAVLEDMKEK 444


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/338 (35%), Positives = 184/338 (54%), Gaps = 6/338 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           + F+YN+L+N LC+      A  +F  M +   E  VV  P+ V+Y+ +IDG CK   + 
Sbjct: 120 SCFSYNSLLNSLCKAKKVHQAFAIFSTMVS---ERSVV--PDVVSYSILIDGFCKIDELG 174

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A++L+ +M D N  PNV TYN+ ++G        +A+ ++ EM+  G  P+V++++ ++
Sbjct: 175 RAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLI 234

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +      K D+A  L E MI  G RPNA  YN L+ G C   + + A ELF  M   GC 
Sbjct: 235 HGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCD 294

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  +Y+ L+ G+C   +IE A+ ++ EM+SKG  PDVV YN L  G F   +   A +L
Sbjct: 295 PDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQL 354

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLC 316
           F  M       DT ++   IDGL K   + +AVE+F R  +      D+  YN LI GLC
Sbjct: 355 FQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLC 414

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
              RL  A ++F+ + R  L  D   +N+++ A+ A G
Sbjct: 415 GEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 194/353 (54%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ T++ LIN LC+      A    + M          C     +Y ++++ LCK   V
Sbjct: 82  PDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSC----FSYNSLLNSLCKAKKV 137

Query: 77  DKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            +A  +F  M  E ++ P+VV+Y+ LI GFC  ++   A+ L+ +M+D    PNV ++N 
Sbjct: 138 HQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNA 197

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
            +N L + G++ +A  + E MI  G  P+   Y+TL+ GF L  + ++A ELF +M S G
Sbjct: 198 FLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRG 257

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+ N  +Y+ L++G CK  + + A  L+ +M+ +G  PD V Y TL  G   + ++E+A 
Sbjct: 258 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAV 317

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++FDEM   G   D  AY   + G  + G   EA +LF+ +   + + D  ++N +IDGL
Sbjct: 318 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGL 377

Query: 316 CKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            K+ RL  A E+F  + +      D+VTYN +I  LC + ++ +A  +F +++
Sbjct: 378 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEID 430



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 174/305 (57%), Gaps = 7/305 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V +Y+ LI+G C+      A  L+++M + N      C PN  TY   ++GL ++G +
Sbjct: 155 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN------CVPNVTTYNAFLNGLMRKGRI 208

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A+ ++ +M     +P+V+TY++LIHGF  A   ++A  LF  M+ +G +PN V++N +
Sbjct: 209 ADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCL 268

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK  K DEA  L   M++ G  P+   Y TL+ GFC  G++ +A E+F  M S G 
Sbjct: 269 LHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH 328

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+ G+ +  +   A  L+  M+S+  KPD V +N +  GL +  +++ A +
Sbjct: 329 DPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVE 388

Query: 257 LFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +F+ M Q HG + D   Y + I GLC    + EA+++F+ +  LK   D  A+N L++ +
Sbjct: 389 VFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448

Query: 316 CKSGR 320
             +G 
Sbjct: 449 YAAGH 453



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 151/284 (53%), Gaps = 7/284 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ ++    C PNV TYN  +NGL R G    A  ++EEM +        C P+ +T
Sbjct: 176 AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAG------CSPDVIT 229

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T+I G       D+A ELF  M      PN VTYN L+HG C  +  +EA  LF +M+
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G  P+ V++  ++   C  GK+++A  + + M+  G  P+   YN L+ GF   G+  
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTL 241
            A +LF  M S  CK +  S++I+I+G  K K ++ A+ ++  M    G  PD+V YN+L
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSL 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
             GL    ++  A K+F E+ R  ++ D  A+   ++ +   G+
Sbjct: 410 IFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 184/388 (47%), Gaps = 41/388 (10%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N   +   + GLC++G    A   FE              P++ T  ++I  LCK G VD
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQA---FEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVD 66

Query: 78  KAKELFLKMKDENINPNVVT-------------------------------------YNS 100
            A  L   M      P++ T                                     YNS
Sbjct: 67  SALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNS 126

Query: 101 LIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           L++  C A   ++A  +F  M+ ++ V P+VVS++++++  CK  ++  A +L + MI +
Sbjct: 127 LLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDL 186

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
              PN   YN  ++G    GR+  A+ ++  M S GC  +V +YS LI+G+   ++ + A
Sbjct: 187 NCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQA 246

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             L+  M+S+G +P+ V YN L  GL +  + + A +LF +M   G   D   Y T + G
Sbjct: 247 HELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYG 306

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            C  G I +AVE+F  +    ++ D+ AYNCL+ G  ++G+   A +LF+ +       D
Sbjct: 307 FCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPD 366

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDME 367
            V++NIMI  L    ++D A ++F  ME
Sbjct: 367 TVSHNIMIDGLSKAKRLDDAVEVFERME 394



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/317 (31%), Positives = 163/317 (51%), Gaps = 6/317 (1%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV---TYNSLIHGFCYANDWNEAK 115
           N V +T  + GLCK G +++A E    M++   +       T +S+I   C A   + A 
Sbjct: 10  NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNA-FVYNTLMD 173
            L   M+ +G  P++ + ++++NELCK  K+ EA   L+ M + I  R ++ F YN+L++
Sbjct: 70  SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129

Query: 174 GFCLTGRVNRAEELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             C   +V++A  +F +M S      +V SYSILI+G+CK  E+  A  LY +M+     
Sbjct: 130 SLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCV 189

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P+V  YN    GL    ++  A  +++EM   G + D   Y T I G        +A EL
Sbjct: 190 PNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHEL 249

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F  +       +   YNCL+ GLCK  +   A ELFR +       D VTY  +++  C 
Sbjct: 250 FEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCN 309

Query: 353 DGKMDKARDLFLDMEAK 369
            GK+++A ++F +M +K
Sbjct: 310 VGKIEQAVEVFDEMVSK 326



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 135/246 (54%), Gaps = 7/246 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++ ++   GC P+V TY+TLI+G         A  LFE M +        C+PN V
Sbjct: 210 DAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRG------CRPNAV 263

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLCKE   D+A ELF KM +   +P+ VTY +L++GFC      +A  +F EM
Sbjct: 264 TYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEM 323

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P+VV++N ++    + GK  EA +L ++M+    +P+   +N ++DG     R+
Sbjct: 324 VSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRL 383

Query: 182 NRAEELFVSMES-MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + A E+F  ME   GC  ++ +Y+ LI G C  + +  A+ ++ E+    + PD   +N 
Sbjct: 384 DDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNV 443

Query: 241 LFIGLF 246
           L   ++
Sbjct: 444 LLEAMY 449



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 7/180 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   GC+P+  TY TL+ G C  G    A+ +F+EM +   +      P+ V
Sbjct: 280 EAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD------PDVV 333

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  ++ G  + G   +A++LF  M      P+ V++N +I G   A   ++A  +F  M
Sbjct: 334 AYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393

Query: 122 -MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             D G  P++V++N ++  LC   ++ EA ++ + + ++ + P+   +N L++     G 
Sbjct: 394 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAMYAAGH 453


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 193/352 (54%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV+T N ++N LC+ G          EM     E GV    + VTY T+++  C+ G V 
Sbjct: 223 NVYTLNIMVNALCKDGKLDNVGVYLSEME----EKGVYA--DLVTYNTLVNAYCRRGLVS 276

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  L   M  + + P + TYN+LI+G C    +  AK +  EM+  G+ PN  +FN ++
Sbjct: 277 EAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPML 336

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
            E C+   + EA R+   M+Q GV P+   +++++  F   G + RA   F  M+ +G  
Sbjct: 337 VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLV 396

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +   Y+ILINGYC+N ++ GAL + +EM+ +G   DVV YNTL  GL     ++ A +L
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL 456

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F EM   GV  D +   T I G CK+G + +A+ LF T+ +   + D+  YN L+DG CK
Sbjct: 457 FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G ++ A EL+  +    +    ++++I+I+  C+ G + +A  L+ +M+ K
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEK 568



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 181/353 (51%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   ++ TYNTL+N  CR G    A  L + MA G G      KP   TY  +I+GLCKE
Sbjct: 254 GVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMA-GKG-----LKPGLFTYNALINGLCKE 307

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  ++AK +  +M    + PN  T+N ++   C   D  EA+ +F EM+ +GV P+++SF
Sbjct: 308 GSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISF 367

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I+    +NG++  A    E M  +G+ P+  +Y  L++G+C    V+ A ++   M  
Sbjct: 368 SSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVE 427

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V +Y+ L+NG C+ K ++ A  L+ EM+ +G+ PD     TL  G  +   + +
Sbjct: 428 RGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTK 487

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF+ M    +  D   Y T +DG CK G + +A EL+  +   +      +++ LI+
Sbjct: 488 ALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILIN 547

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C  G +  A+ L+  +    +   +VT N +I      G + KA D    M
Sbjct: 548 GFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTM 600



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 180/362 (49%), Gaps = 14/362 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++   G  P++ ++++++    R G    AL  FE+M       GV   P+TV
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMK------GVGLVPDTV 400

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINP----NVVTYNSLIHGFCYANDWNEAKCL 117
            YT +I+G C+   V  A    LKM++E +      +VVTYN+L++G C     ++A  L
Sbjct: 401 IYTILINGYCRNDDVSGA----LKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADEL 456

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM+++GV P+  +   +++  CK+G M +A  L E M    ++P+   YNTLMDGFC 
Sbjct: 457 FKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCK 516

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G + +A+EL+  M S     +  S+SILING+C    +  A  L+ EM  KGIKP +V 
Sbjct: 517 VGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVT 576

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            NT+  G      + +A    + M   GV  D   Y T I+   K      A  L   + 
Sbjct: 577 CNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNME 636

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++  YN ++ G  + GR++ A  +   +    +  D  TY  +I+   +   M 
Sbjct: 637 ERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMK 696

Query: 358 KA 359
           +A
Sbjct: 697 EA 698



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 187/375 (49%), Gaps = 29/375 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM---------ANGNGEFGVVCK------- 57
           G +P +FTYN LINGLC+ G    A  + +EM         A  N      C+       
Sbjct: 289 GLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEA 348

Query: 58  -------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                        P+ +++++I+    + G + +A   F KMK   + P+ V Y  LI+G
Sbjct: 349 ERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILING 408

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           +C  +D + A  +  EM+++G   +VV++N ++N LC+   +D+A  L + M++ GV P+
Sbjct: 409 YCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPD 468

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            +   TL+ G+C  G + +A  LF +M     K +V +Y+ L++G+CK  E+E A  L+ 
Sbjct: 469 FYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWY 528

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M+S+ I P  + ++ L  G   +  V  AF+L+DEM+  G+        T I G  + G
Sbjct: 529 DMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAG 588

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + +A +   T+       D   YN LI+   K      A+ L  ++    L+ ++VTYN
Sbjct: 589 NLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYN 648

Query: 345 IMIHALCADGKMDKA 359
            ++      G+M +A
Sbjct: 649 AILGGFSRHGRMQEA 663



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 170/339 (50%), Gaps = 7/339 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A A F K++  G  P+   Y  LING CR      AL +  EM     E G  C  + V
Sbjct: 382 RALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV----ERG--CVMDVV 435

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++GLC+   +D A ELF +M +  + P+  T  +LIHG+C   +  +A  LF  M
Sbjct: 436 TYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM 495

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+VV++N +M+  CK G+M++A  L   MI   + P+   ++ L++GFC  G V
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLV 555

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L+  M+  G K  + + + +I GY +   +  A    + M+S+G+ PD + YNTL
Sbjct: 556 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +    +RAF L + M+  G+  +   Y   + G  ++G + EA  +   +     
Sbjct: 616 INSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGI 675

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIAD 339
             D   Y  LI+G      +K A+ +    L RG +  D
Sbjct: 676 NPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPDD 714



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/167 (19%), Positives = 76/167 (45%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V  + +LI  Y + +++      +  +  +G    +   N L   + ++  V+ A+K+++
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +  + G   + +     ++ LCK+G +         +       D+  YN L++  C+ G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +  A+ L   +    L   + TYN +I+ LC +G  ++A+ +  +M
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEM 320



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 15/166 (9%)

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+   ++K++  A SL   ++ K     V + ++L           +   +FD + R
Sbjct: 103 ATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTSSSNLNSNQNVVVFDLLIR 162

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
             V A                 + E  E F+ LR   + + I A N L+  + K G + +
Sbjct: 163 TYVQARK---------------LREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDL 207

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           AW+++    +   I +V T NIM++ALC DGK+D       +ME K
Sbjct: 208 AWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEK 253


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 194/389 (49%), Gaps = 37/389 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRT----------------------------- 32
           EAA L  ++   GC P+V TY  L+ GLCRT                             
Sbjct: 265 EAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVVMLNTVIRGCL 324

Query: 33  --GHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
             G    A  L+E M +        C P+  TY+ ++ GLCK G    A  +  +M+++ 
Sbjct: 325 TEGKLARATELYEMMGSKG------CPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKG 378

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             PN+VTY++L+H FC    W++A+ +  +M+ +G   N   +N I+  LCK+GK+D+A+
Sbjct: 379 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQAT 438

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           RL++ M   G +P+   YNT++   C    +  AE +F ++   G   N  +Y+ LI+  
Sbjct: 439 RLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHAL 498

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +N   +  L L SEML  G + DV+ YN L   L +   V+R+  L +EM   G+  + 
Sbjct: 499 LRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNN 558

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           ++Y   I+ LCK G + +A+EL + +       DI  YN LI+GLCK G    A  L   
Sbjct: 559 FSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEK 618

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKA 359
           LP   +  D+VTYNI+I   C    +D A
Sbjct: 619 LPNENVHPDIVTYNILISWHCKVRLLDDA 647



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 173/347 (49%), Gaps = 6/347 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L+  +   GC P+V TY+ L++GLC+ G    A+ + +EM     E G  C PN V
Sbjct: 331 RATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEME----EKG--CAPNIV 384

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T++   C+ G  D A+ +  +M  +  + N   YN +I+  C     ++A  L  EM
Sbjct: 385 TYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEM 444

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG +P++ ++N ++  LC N  M+EA  +   +I+ GV  N   YNTL+      GR 
Sbjct: 445 KSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRW 504

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                L   M   GC+ +V SY+ LI   CK   ++ +++L  EM++KGIKP+   YN L
Sbjct: 505 QEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNML 564

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A +L  EM   G+  D   Y T I+GLCK G+   A+ L   L     
Sbjct: 565 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 624

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
             DI  YN LI   CK   L  A  L      G ++ +  T+ +M+ 
Sbjct: 625 HPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQ 671



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 180/365 (49%), Gaps = 10/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++      P  FT+      LCR G    AL L   MA         C P+ V
Sbjct: 160 DALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALALLRGMARHG------CVPDAV 213

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I  L  +G V +A  L  +M       +V T+N L+ G C      EA  L   M
Sbjct: 214 LYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRM 273

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M QG  P+VV++  ++  LC+  + DEA  +L  + ++    N  + NT++ G    G++
Sbjct: 274 MTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEV----NVVMLNTVIRGCLTEGKL 329

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA EL+  M S GC  +V +YSIL++G CK      A+ +  EM  KG  P++V Y+TL
Sbjct: 330 ARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTL 389

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                     + A  + D+M   G + ++  Y   I  LCK+G + +A  L + ++    
Sbjct: 390 LHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGC 449

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  YN +I  LC +  ++ A  +FR+L    ++A+ +TYN +IHAL  +G+  +   
Sbjct: 450 KPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLR 509

Query: 362 LFLDM 366
           L  +M
Sbjct: 510 LASEM 514



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 10/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++ + GC  +V T+N L+ GLC  G    A  L + M          C P+ V
Sbjct: 230 EAAMLLDEMLLMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQG------CMPSVV 283

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLC+    D+A  +  ++ + N    VV  N++I G         A  L+  M
Sbjct: 284 TYGFLLQGLCRTRQADEACAMLGRLPEVN----VVMLNTVIRGCLTEGKLARATELYEMM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V +++++M+ LCK G+   A R+L+ M + G  PN   Y+TL+  FC  G  
Sbjct: 340 GSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M + G   N   Y+ +I   CK+ +++ A  L  EM S+G KPD+  YNT+
Sbjct: 400 DDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTM 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L     +E A  +F  +   GV A+   Y T I  L +NG   E + L   + +   
Sbjct: 460 IYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGC 519

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LD+ +YN LI  LCK G +  +  L   +    +  +  +YN++I+ LC  GK+  A +
Sbjct: 520 QLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALE 579

Query: 362 LFLDM 366
           L  +M
Sbjct: 580 LSKEM 584



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 175/368 (47%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL   +   GC P+   Y T+I+ L   G    A  L +EM        + C  +  
Sbjct: 195 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEM------LLMGCAADVN 248

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ GLC  G V +A  L  +M  +   P+VVTY  L+ G C     +EA      M
Sbjct: 249 TFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEA----CAM 304

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV  N ++      GK+  A+ L E+M   G  P+   Y+ LM G C  GR 
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   ME  GC  N+ +YS L++ +C+N   + A ++  +ML+KG   +   YN +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  ++++A +L  EM+  G   D   Y T I  LC N  + EA  +FR L     
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN LI  L ++GR +    L   +       DV++YN +I ALC +G +D++  
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 362 LFLDMEAK 369
           L  +M  K
Sbjct: 545 LLEEMVTK 552



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 159/360 (44%), Gaps = 36/360 (10%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL+L ++M      F V   P+  +Y  ++  L +      A  L+ +M  + + P   T
Sbjct: 125 ALHLLDQMPR---RFAV--SPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFT 179

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +       C      +A  L   M   G  P+ V +  +++ L   G + EA+ LL+ M+
Sbjct: 180 FGVAARALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEML 239

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE-- 215
            +G   +   +N L+ G C  GRV  A  L   M + GC  +V +Y  L+ G C+ ++  
Sbjct: 240 LMGCAADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQAD 299

Query: 216 -------------------------IEGALS----LYSEMLSKGIKPDVVIYNTLFIGLF 246
                                     EG L+    LY  M SKG  PDV  Y+ L  GL 
Sbjct: 300 EACAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           ++ +   A ++ DEM+  G A +   Y T +   C+NG   +A  +   +    + ++ +
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            YN +I  LCK G+L  A  L + +       D+ TYN MI+ LC +  M++A  +F ++
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 125/279 (44%), Gaps = 4/279 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           ++P+  +YN ++     A+   +A  L+  M+   V P   +F V    LC+ G+  +A 
Sbjct: 138 VSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDAL 197

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            LL  M + G  P+A +Y T++      G V  A  L   M  MGC  +V +++ L+ G 
Sbjct: 198 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLGL 257

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C    +  A  L   M+++G  P VV Y  L  GL    Q + A  +   +    V    
Sbjct: 258 CGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV--- 314

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
               T I G    G +  A EL+  +       D+  Y+ L+ GLCK GR   A  +   
Sbjct: 315 -MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDE 373

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +       ++VTY+ ++H+ C +G  D AR +   M AK
Sbjct: 374 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAK 412



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 107/218 (49%), Gaps = 7/218 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  L   G   N  TYNTLI+ L R G     L L  EM          C+ + +
Sbjct: 471 EAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG------CQLDVI 524

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I  LCKEG VD++  L  +M  + I PN  +YN LI+  C A    +A  L  EM
Sbjct: 525 SYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEM 584

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG+ P++V++N ++N LCK G    A  LLE +    V P+   YN L+   C    +
Sbjct: 585 LNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLL 644

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNK-EIEG 218
           + A  L     S G   N  ++ +++  + +    +EG
Sbjct: 645 DDAAMLLDKAISGGIVPNERTWGMMVQNFVRQTVNLEG 682


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 200/367 (54%), Gaps = 9/367 (2%)

Query: 2   EAAALFMKLRVFGCE-PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EA+ LF +     C+  N+FTYN+L++ LC+ G    A  L+++M +          P  
Sbjct: 437 EASKLFDE--AVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKG------LAPTK 488

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y ++I G C++G +D A  +F  M D  + PNV+TY+ L+ G+    D   A  +F  
Sbjct: 489 VSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDR 548

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+ + P+  ++N+ +N LCK G+  EA  +L+  ++ G  P    YN++MDGF   G 
Sbjct: 549 MVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGS 608

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A   +  M   G   NV +Y+ LING+CKN   + AL + +EM +KG++ D+  Y  
Sbjct: 609 VSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGA 668

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   +E A  LF E+   G++ ++  Y + I G      +  A+ L + +    
Sbjct: 669 LIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEG 728

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D++ Y  LIDGL K GRL +A +L+  +    +I D++ Y ++I+ LC  G+++ A+
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQ 788

Query: 361 DLFLDME 367
            +  +ME
Sbjct: 789 KILAEME 795



 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ K+   G  P   +YN++I G CR G+  +A ++F +M +         KPN +
Sbjct: 471 EATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCG------LKPNVI 524

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ ++DG  K G  + A  +F +M DENI P+  TYN  I+G C     +EA+ +  + 
Sbjct: 525 TYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKF 584

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P  +++N IM+   K G +  A      M + GV PN   Y TL++GFC     
Sbjct: 585 VEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNT 644

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M + G + ++ +Y  LI+G+CK ++IE A  L+SE+L  G+ P+ VIYN+L
Sbjct: 645 DLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSL 704

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   ++ +E A  L   M   G++ D   Y T IDGL K G +V A++L+  +     
Sbjct: 705 ISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGI 764

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  Y  LI+GLC  G+L+ A ++   + R  +  +V  YN +I      G + +A  
Sbjct: 765 IPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFR 824

Query: 362 LFLDM 366
           L  +M
Sbjct: 825 LHNEM 829



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/397 (32%), Positives = 189/397 (47%), Gaps = 42/397 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  ++   G + NV    TL+ G C+    + AL  F++M N NG       PN 
Sbjct: 331 VEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM-NENGP-----SPNR 384

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I+  CK G + KA +L+ +MK++NI P V   NSLI GF       EA  LF E
Sbjct: 385 VTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDE 444

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            +   +  N+ ++N +++ LCK GKM EA+ L + M+  G+ P    YN+++ G C  G 
Sbjct: 445 AVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGN 503

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------------ 228
           ++ A  +F  M   G K NV +YSIL++GY KN + E A  ++  M+             
Sbjct: 504 LDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNI 563

Query: 229 -----------------------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                                  KG  P  + YN++  G  +   V  A   + EM   G
Sbjct: 564 KINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESG 623

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V+ +   Y T I+G CKN     A+++   +R    ELDI AY  LIDG CK   ++ A 
Sbjct: 624 VSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETAS 683

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            LF  L  G L  + V YN +I        M+ A +L
Sbjct: 684 WLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNL 720



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 173/352 (49%), Gaps = 6/352 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA++F  +   G +PNV TY+ L++G  + G T  A  +F+ M + N        P+  T
Sbjct: 507 AASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDEN------IVPSDFT 560

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y   I+GLCK G   +A+++  K  ++   P  +TYNS++ GF      + A   + EM 
Sbjct: 561 YNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMC 620

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + GV PNV+++  ++N  CKN   D A ++   M   G+  +   Y  L+DGFC    + 
Sbjct: 621 ESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIE 680

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  +   G   N   Y+ LI+GY     +E AL+L   ML +GI  D+  Y TL 
Sbjct: 681 TASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLI 740

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  ++  A  L+ EM   G+  D   Y   I+GLC  G +  A ++   +      
Sbjct: 741 DGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSIT 800

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++  YN LI G  K+G L+ A+ L   +    L  +  TY+I+I+     G
Sbjct: 801 PNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGKIKGG 852



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 147/295 (49%), Gaps = 1/295 (0%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           K+   ++AK+ FL+ K   +  +   Y+ +I  FC   D   A  L  +M D+G  P+  
Sbjct: 256 KDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVELACGLLKDMRDKGWVPSEG 315

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +F  ++    K G M EA RL + M+  GV+ N  V  TL+ G+C   ++  A E F  M
Sbjct: 316 TFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKM 375

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   N  +Y++LI   CKN  +  A  LY++M +K I P V I N+L  G  ++   
Sbjct: 376 NENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESR 435

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A KLFDE     + A+ + Y + +  LCK G + EA  L++ +          +YN +
Sbjct: 436 EEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSM 494

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           I G C+ G L +A  +F  +    L  +V+TY+I++     +G  + A  +F  M
Sbjct: 495 ILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRM 549



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 138/311 (44%), Gaps = 34/311 (10%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           + + ++  YN L++ +  AN  N+A   F  +++  + P +   N ++  L KN  + EA
Sbjct: 169 DFDSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEA 228

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             + E M+  GV  + F  + +M           A++ F+  +S G K +  +YSI+I  
Sbjct: 229 REVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQA 288

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +CKN ++E A  L  +M  KG  P    + ++     +   +  A +L DEM   GV  +
Sbjct: 289 FCKNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMN 348

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF- 328
                T + G CK   +V A+E F  +       +   Y  LI+  CK+G +  A++L+ 
Sbjct: 349 VVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYT 408

Query: 329 --------------RSLPRGVL-------------------IADVVTYNIMIHALCADGK 355
                          SL RG L                   IA++ TYN ++  LC +GK
Sbjct: 409 QMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGK 468

Query: 356 MDKARDLFLDM 366
           M +A  L+  M
Sbjct: 469 MSEATTLWQKM 479



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 102/237 (43%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++N   K  K+++A      +++  + P     N L+        +  A E++  M 
Sbjct: 177 YNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKMV 236

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   + F+  I++    K+   E A   + E  S+G+K D   Y+ +     +   VE
Sbjct: 237 LKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLDVE 296

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L  +M+  G       + + I    K G +VEA+ L   +     ++++     L+
Sbjct: 297 LACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLV 356

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G CK  +L  A E F  +       + VTY ++I   C +G M KA DL+  M+ K
Sbjct: 357 KGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNK 413


>gi|302813417|ref|XP_002988394.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
 gi|300143796|gb|EFJ10484.1| hypothetical protein SELMODRAFT_128001 [Selaginella moellendorffii]
          Length = 388

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 190/351 (54%), Gaps = 11/351 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV  +N+++NG  R GH   AL     M          C P+ VTY T+ID   K    
Sbjct: 9   PNVVIFNSVVNGFARAGHLDGALGTLRMMRKAG------CDPDEVTYNTLIDVFHKLERF 62

Query: 77  DKAKELFLKMKDENINPNVV--TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           D A+EL  +M D  I P V+  TYN++I  FC   +  +AK +   M+D G +P+VV++N
Sbjct: 63  DSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYN 122

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ LCK  + D+A   L+LM ++   PN   YNT+++G   + +   A+ L   M S+
Sbjct: 123 TLISGLCKVRRADDA---LQLMREMEPAPNTITYNTVINGLWRSRKDTEAQALLDEMISV 179

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  +V +Y+ +I   C+++E+E A+ ++  M  K  + D V + TL  G     ++E A
Sbjct: 180 GCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCETDEVTFATLVDGFLRDKRLEDA 239

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
               D M R G+ +D  +Y   ++ LC  G   +A E+F  +    Y   + +YN L+ G
Sbjct: 240 GGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKG 299

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           LCK+ R++ A  LFR +    +  DVV+Y  +I  LCA  ++D+A DLF D
Sbjct: 300 LCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRD 350



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 163/320 (50%), Gaps = 7/320 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GC+P+  TYNTLI+   +      A  L E+M +     GV+ +    TY  +I  
Sbjct: 37  MRKAGCDPDEVTYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAE----TYNNVIAS 92

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            C+   V KAK +   M D    P+VVTYN+LI G C     ++A  L  EM      PN
Sbjct: 93  FCEVCNVRKAKGILELMIDSGCKPDVVTYNTLISGLCKVRRADDALQLMREMEP---APN 149

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            +++N ++N L ++ K  EA  LL+ MI +G   +   YN ++   C +  + +A ++F+
Sbjct: 150 TITYNTVINGLWRSRKDTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFL 209

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M    C+ +  +++ L++G+ ++K +E A      M   GI  DV  Y  L   L +  
Sbjct: 210 YMRKKKCETDEVTFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRG 269

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
             ++A ++F+ M   G A    +Y   + GLCK   +  A+ LFR ++  + + D+ +Y 
Sbjct: 270 SAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQPDVVSYT 329

Query: 310 CLIDGLCKSGRLKIAWELFR 329
            +I GLC + R+  A +LFR
Sbjct: 330 TVIKGLCAARRIDEAIDLFR 349



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 6/187 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC  +V TYN +I  LCR+     A+++F  M          C+ + V
Sbjct: 168 EAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKK------CETDEV 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T++DG  ++  ++ A      M    I  +V +Y  L++  C      +A  +F  M
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLM 281

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P +VS+NV++  LCK  +++ A  L   M +  ++P+   Y T++ G C   R+
Sbjct: 282 VDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRI 341

Query: 182 NRAEELF 188
           + A +LF
Sbjct: 342 DEAIDLF 348



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +L   + P+VVI+N++  G      ++ A      M++ G   D   Y T ID   K   
Sbjct: 2   ILGGAVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCDPDEVTYNTLIDVFHKLER 61

Query: 286 IVEAVELFRTLRILKYELDIR------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
              A EL   +    ++  IR       YN +I   C+   ++ A  +   +       D
Sbjct: 62  FDSARELLEQM----WDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPD 117

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDME 367
           VVTYN +I  LC   + D A  L  +ME
Sbjct: 118 VVTYNTLISGLCKVRRADDALQLMREME 145



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +++    +P+V +Y T+I GLC       A++LF + +          +PN +T
Sbjct: 309 ALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRDTS--------FLEPNDIT 360

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           + T+  GL K G ++    +  + KD+N
Sbjct: 361 HETLRIGLEKSGRLEDYSSVTGR-KDQN 387


>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/333 (36%), Positives = 183/333 (54%), Gaps = 19/333 (5%)

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           G +   + V Y TIIDGLCK+  V+ A EL+ +M  E I+P+V T+NSLI+GFC      
Sbjct: 10  GKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLK 69

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A  LF +M+ + + P+V +F ++++ LCK GKM EA  ++ +M++ GV PN   Y ++M
Sbjct: 70  DAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIM 129

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +G+CL   VN+ + +F ++  MG   N  SY+I+ING+CK K +  AL L+ EM  +GI 
Sbjct: 130 EGYCLVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIV 189

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P  V Y++L  GL +   +         M  H +   T  Y   ID LCK+ ++ +A+ L
Sbjct: 190 PITVTYSSLIDGLCKSTMLGSLLMRCMLMVNHLIYPLTVLY---IDALCKSNHLDKAIAL 246

Query: 293 ----------------FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
                           F+ L I  Y L+I+ YN +I+GLCK G    A  L   +    +
Sbjct: 247 VKKIKDQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGI 306

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           I D VTY   I AL    + +KA  LF  M A+
Sbjct: 307 IPDAVTYETNIRALFHKDENEKAEKLFRKMIAR 339



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 147/313 (46%), Gaps = 54/313 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++      P+V T+N+LI G C  G    A  LF +M   N        P+  
Sbjct: 35  DAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKN------INPSVY 88

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T ++DGLCKEG + +AK +   M  + + PNVVTY S++ G+C  N+ N+ K +F  +
Sbjct: 89  TFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVNKTKHVFRTI 148

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT--- 178
              GV PN  S+N+++N  CK   ++EA  L + M   G+ P    Y++L+DG C +   
Sbjct: 149 SRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCKSTML 208

Query: 179 ---------------------------------------------GRVNRAEELFVSMES 193
                                                        GR+  A+++F  +  
Sbjct: 209 GSLLMRCMLMVNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGRLKNAQDVFQDLLI 268

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N+ +Y+I+ING CK    + A +L S+M   GI PD V Y T    LF   + E+
Sbjct: 269 KGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEK 328

Query: 254 AFKLFDEMQRHGV 266
           A KLF +M   G+
Sbjct: 329 AEKLFRKMIARGL 341



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 58/105 (55%)

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           D+++   V +D   Y T IDGLCK+  + +A EL+  +   K   D+  +N LI G C  
Sbjct: 6   DQIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCII 65

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G+LK A+ LF  +    +   V T+ I++  LC +GKM +A+ + 
Sbjct: 66  GQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVI 110


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 202/404 (50%), Gaps = 46/404 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   + +  CEP+V T+N +I+GLCR G    A  L + M             + +
Sbjct: 258 EALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRG------FSTDAL 311

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI-- 119
           TY  ++ GLC+ G VD+A+ L  K+     NPN V YN+LI G+  +  + EAK L    
Sbjct: 312 TYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNN 367

Query: 120 ----------------------------------EMMDQGVQPNVVSFNVIMNELCKNGK 145
                                             EM+ +  +PNV+++ +++N  CK G+
Sbjct: 368 MVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGR 427

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           ++EA+ ++  M   G+  N   YN L+   C  G +  A +LF  M   GCK ++++++ 
Sbjct: 428 LEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNS 487

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LING CKN ++E ALSLY +M  +G+  + V YNTL         +++AFKL DEM   G
Sbjct: 488 LINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRG 547

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   Y   I  LCK G + + + LF  +        I + N LI GLC++G++  A 
Sbjct: 548 CPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDAL 607

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  + +    L  D+VTYN +I+ LC  G + +A +LF  ++++
Sbjct: 608 KFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSE 651



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 121/343 (35%), Positives = 177/343 (51%), Gaps = 6/343 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+  + + G EP+ +T+N +I+GL + G+ + AL L  EM     E      PN +TYT 
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFE------PNVITYTI 417

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G CK+G +++A E+   M  + ++ N V YN LI   C   +  EA  LF EM  +G
Sbjct: 418 LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +P++ +FN ++N LCKN KM+EA  L   M   GV  N   YNTL+  F +   + +A 
Sbjct: 478 CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAF 537

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   M   GC  +  +Y+ LI   CK   +E  L L+ EML KGI P ++  N L  GL
Sbjct: 538 KLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGL 597

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +V  A K   +M   G+  D   Y + I+GLCK G++ EA  LF  L+      D 
Sbjct: 598 CRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDA 657

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
             YN LI   C  G    A  L         I + VT++I+I+
Sbjct: 658 ITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILIN 700



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 195/365 (53%), Gaps = 11/365 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G  P V+T+  ++  LC       A +L  +MA         C PN+V 
Sbjct: 189 APNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHG------CVPNSVI 242

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I  LC+   V +A +L   M      P+V T+N +IHG C A   +EA  L   M+
Sbjct: 243 YQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRML 302

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   + +++  +M+ LC+ G++DEA  LL  +      PN  +YNTL+ G+  +GR  
Sbjct: 303 LRGFSTDALTYGYLMHGLCRMGQVDEARALLNKI----PNPNTVLYNTLISGYVASGRFE 358

Query: 183 RAEE-LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A++ L+ +M   G + + ++++I+I+G  K   +  AL L +EM++K  +P+V+ Y  L
Sbjct: 359 EAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTIL 418

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  ++E A ++ + M   G++ +T  Y   I  LCK+G I EA++LF  +     
Sbjct: 419 INGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGC 478

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  +N LI+GLCK+ +++ A  L+  +    +IA+ VTYN ++HA      + +A  
Sbjct: 479 KPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFK 538

Query: 362 LFLDM 366
           L  +M
Sbjct: 539 LVDEM 543



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 161/315 (51%), Gaps = 5/315 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C P   +Y  ++D L        A  +F  M    ++P V T+  ++   C  ++ + A 
Sbjct: 166 CDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSAC 225

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M   G  PN V +  +++ LC+N ++ EA +LLE M  +   P+   +N ++ G 
Sbjct: 226 SLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGL 285

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  GR++ A +L   M   G   +  +Y  L++G C+  +++ A +L    L+K   P+ 
Sbjct: 286 CRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARAL----LNKIPNPNT 341

Query: 236 VIYNTLFIGLFEIHQVERAFK-LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V+YNTL  G     + E A   L++ M   G   D + +   IDGL K GY+V A+EL  
Sbjct: 342 VLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLN 401

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +   ++E ++  Y  LI+G CK GRL+ A E+  S+    L  + V YN +I ALC DG
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461

Query: 355 KMDKARDLFLDMEAK 369
            +++A  LF +M  K
Sbjct: 462 NIEEALQLFGEMSGK 476



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 127/337 (37%), Gaps = 68/337 (20%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL------- 153
           LI       D+   + L  +M D+G+      F +IM    K G   +A+RLL       
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 154 -----------------------------ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
                                          M+  GV P  + +  +M   C+   V+ A
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSA 224

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M   GC  N   Y  LI+  C+N  +  AL L  +M     +PDV  +N +  G
Sbjct: 225 CSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHG 284

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE------------- 291
           L    ++  A KL D M   G + D   Y   + GLC+ G + EA               
Sbjct: 285 LCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLY 344

Query: 292 -------------------LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
                              L+  + I  YE D   +N +IDGL K G L  A EL   + 
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                 +V+TY I+I+  C  G++++A ++   M AK
Sbjct: 405 AKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAK 441



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 122/235 (51%), Gaps = 11/235 (4%)

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++++L   G      +LL+ M   G+     ++  +M  +   G   +A  L + M  +
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163

Query: 195 -GCKHNVFSYS----ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
             C     SY+    IL++G C       A +++ +MLS+G+ P V  +  +   L  + 
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPRV----APNVFYDMLSRGVSPTVYTFGVVMKALCMVS 219

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V+ A  L  +M +HG   ++  Y+T I  LC+N  + EA++L   + ++  E D++ +N
Sbjct: 220 EVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFN 279

Query: 310 CLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +I GLC++GR+  A +L  R L RG    D +TY  ++H LC  G++D+AR L 
Sbjct: 280 DVIHGLCRAGRIHEAAKLLDRMLLRG-FSTDALTYGYLMHGLCRMGQVDEARALL 333



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 6/138 (4%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            LF ++   G  P + + N LI+GLCRTG    AL   ++M +          P+ VTY 
Sbjct: 573 GLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRG------LTPDIVTYN 626

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++I+GLCK G V +A  LF K++ E I P+ +TYN+LI   C+   +N+A  L  + +D 
Sbjct: 627 SLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDS 686

Query: 125 GVQPNVVSFNVIMNELCK 142
           G  PN V++++++N + K
Sbjct: 687 GFIPNEVTWSILINYIVK 704


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 208/390 (53%), Gaps = 29/390 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++  K+   G EP++ T NT I G C  G    ALN  +++        +    + V+
Sbjct: 122 AFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV------ALGFHLDQVS 175

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+GLCK G    A +L  ++  + +  N V YN++I G       N+A  L+ EM+
Sbjct: 176 YGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMV 235

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + + P+VV+++ ++      GK+ +A  L   MI   ++P+ + +N L+DGFC  GR+ 
Sbjct: 236 AKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLK 295

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A+ +   M     K NV +++ L++G+CK+++++   ++++ M+ +GIKP+VV Y +L 
Sbjct: 296 KAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLM 355

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   + QV +A K+F+ M + GV A+  +Y   I+G CK   + +A++LF  +      
Sbjct: 356 DGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHII 415

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN------------------ 344
            D+  YN LIDGLCKSG++  A++L   +       +++TYN                  
Sbjct: 416 PDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALLTKLKDQGIQPN 475

Query: 345 -----IMIHALCADGKMDKARDLFLDMEAK 369
                I+I  LC  GK++ AR +F D+  K
Sbjct: 476 MHTDTILIKGLCQSGKLEAARKVFEDLLVK 505



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 158/297 (53%), Gaps = 18/297 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++      P+V TY+ LI G    G    A++LF +M   N       KP+  
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILEN------IKPDVY 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++DG CKEG + KAK +   M  ++I PNV T+N+L+ GFC      E K +F  M
Sbjct: 280 TFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M QG++PNVV++  +M+  C   ++++A ++   M Q GV  N   YN +++GFC   +V
Sbjct: 340 MKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKV 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A +LF+ M       +V +Y+ LI+G CK+ +I  A  L +EM  +G  P+++ YN++
Sbjct: 400 DKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSI 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
              L              +++  G+  +       I GLC++G +  A ++F  L +
Sbjct: 460 LNALLT------------KLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVFEDLLV 504



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 189/367 (51%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF  L         F +N ++  L ++ H    L+L ++M     EF  +  PN VT
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQM-----EFEGI-NPNFVT 105

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I+  C+ G +  A  +  K+      P+++T N+ I GFC     ++A     +++
Sbjct: 106 FNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLV 165

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G   + VS+  ++N LCK G+   A +LL  +    V+ NA +YNT++DG      VN
Sbjct: 166 ALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVN 225

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L+  M +     +V +YS LI G+    +++ A+ L+++M+ + IKPDV  +N L 
Sbjct: 226 DAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILV 285

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  ++++A  + D M    +  +   + T +DG CK+  + E   +F  +     +
Sbjct: 286 DGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIK 345

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  Y  L+DG C   ++  A ++F ++ +  + A+V +YNIMI+  C   K+DKA  L
Sbjct: 346 PNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKL 405

Query: 363 FLDMEAK 369
           F++M  K
Sbjct: 406 FIEMHHK 412



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 156/313 (49%), Gaps = 1/313 (0%)

Query: 51  EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
            F ++ + N + Y++I         VD A  LF  +  +N       +N ++     +  
Sbjct: 25  SFLILLQKNFIPYSSISTTFHSND-VDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKH 83

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
           ++    L  +M  +G+ PN V+FN+++N  C+ G +  A  +L  ++++G  P+    NT
Sbjct: 84  YHTVLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNT 143

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
            + GFCL G++++A      + ++G   +  SY  LING CK  E   AL L   +  K 
Sbjct: 144 FIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKL 203

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           ++ + V+YNT+  G+ +   V  AF L+ EM    ++ D   Y   I G    G + +A+
Sbjct: 204 VQLNAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAI 263

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           +LF  + +   + D+  +N L+DG CK GRLK A  +   +    +  +V T+N ++   
Sbjct: 264 DLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGF 323

Query: 351 CADGKMDKARDLF 363
           C D KM + + +F
Sbjct: 324 CKDRKMKEGKTVF 336



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/211 (28%), Positives = 101/211 (47%), Gaps = 1/211 (0%)

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
           I ++ N   Y+++   F  +  V+ A  LF S+         F ++ ++    K+K    
Sbjct: 28  ILLQKNFIPYSSISTTFH-SNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHT 86

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
            LSL  +M  +GI P+ V +N L     ++  +  AF +  ++ + G   D     TFI 
Sbjct: 87  VLSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIK 146

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G C  G I +A+     L  L + LD  +Y  LI+GLCK G  + A +L R +   ++  
Sbjct: 147 GFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQL 206

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + V YN +I  +  D  ++ A DL+ +M AK
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAK 237


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 190/365 (52%), Gaps = 11/365 (3%)

Query: 10  LRVFGC-----EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           L VFG      +PN+ TYN +I  LC+ G    A++ F EM   N      C P+  TY+
Sbjct: 160 LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN------CNPDVFTYS 213

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+++GLCKE  VD+A  L  +M+ E   PN VT+N LI       D + A  L   M  +
Sbjct: 214 TLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLK 273

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  PN V++N +++ LC  GK+D+A  LLE M+     PN   Y T+++G     R    
Sbjct: 274 GCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDG 333

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             + +SME  G K N + YS LI+G  K  + E A+ L+ EM  KG KP+VV+Y     G
Sbjct: 334 VHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 393

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    + + A  +  EM   G   + + Y + + G  K G   +A+ +++ +       +
Sbjct: 394 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 453

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +   + L++GLC+SGRL+ A  ++  +    L  DVV Y+ MI  LC  G +DK   LF 
Sbjct: 454 VVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFY 513

Query: 365 DMEAK 369
           +M+ +
Sbjct: 514 EMQCQ 518



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 195/369 (52%), Gaps = 14/369 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A   F ++ +  C P+VFTY+TL+NGLC+      A+ L +EM A G       C PN V
Sbjct: 193 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG-------CLPNPV 245

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID L K G + +A +L   M  +   PN VTYN+LIHG C     ++A  L  +M
Sbjct: 246 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 305

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN V++  I+N L K  + ++   +L  M + G + N ++Y++L+ G    G+ 
Sbjct: 306 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 365

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   GCK NV  Y   I+G C++++ + A  +  EMLSKG  P+   Y++L
Sbjct: 366 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 425

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+    ++A  ++ EM    +  +       ++GLC++G + EA+ ++  +     
Sbjct: 426 MKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGL 485

Query: 302 ELDIRAYNCLIDGLCKSGR----LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           + D+ AY+ +I GLC  G     LK+ +E+    P+     DVVTYNI+ +ALC    + 
Sbjct: 486 KPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSR--PDVVTYNILFNALCRQDNLT 543

Query: 358 KARDLFLDM 366
           +A DL   M
Sbjct: 544 RAIDLLNSM 552



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 43/332 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +++  GC PN  T+N LI+ L + G    A  L + M      F   C PN V
Sbjct: 227 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM------FLKGCVPNEV 280

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------- 106
           TY T+I GLC +G +DKA  L  KM      PN VTY ++I+G                 
Sbjct: 281 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM 340

Query: 107 -----YANDW----------NEAKC-----LFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                 AN++           E K      L+ EM ++G +PNVV +   ++ LC++ K 
Sbjct: 341 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 400

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA  +L+ M+  G  PNAF Y++LM GF   G   +A  ++  M S   +HNV   S+L
Sbjct: 401 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 460

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM--QRH 264
           +NG C++  +  AL++++ ML +G+KPDVV Y+++  GL ++  V++  KLF EM  Q  
Sbjct: 461 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 520

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
               D   Y    + LC+   +  A++L  ++
Sbjct: 521 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 552



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 159/325 (48%), Gaps = 8/325 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM---KDENINPN 94
           A+N F  MAN      + CK    ++ ++++ + +EG    A + +L +     +   PN
Sbjct: 119 AVNFFHRMAND-----LHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPN 173

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           ++TYN +I   C     + A   F EM  +   P+V +++ +MN LCK  ++DEA  LL+
Sbjct: 174 LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 233

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  PN   +N L+D     G ++RA +L  +M   GC  N  +Y+ LI+G C   
Sbjct: 234 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 293

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +++ ALSL  +M+S    P+ V Y T+  GL +  + E    +   M+  G  A+ + Y 
Sbjct: 294 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 353

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           + I GL K G    AV L++ +     + ++  Y   IDGLC+  +   A ++ + +   
Sbjct: 354 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413

Query: 335 VLIADVVTYNIMIHALCADGKMDKA 359
             + +  TY+ ++      G   KA
Sbjct: 414 GFLPNAFTYSSLMKGFFKKGDSQKA 438



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 158/313 (50%), Gaps = 29/313 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +   + M +   G + N + Y++LI+GL + G +  A+ L++EMA         CKPN V
Sbjct: 332 DGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG------CKPNVV 385

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   IDGLC++   D+A+++  +M  +   PN  TY+SL+ GF    D  +A  ++ EM
Sbjct: 386 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 445

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M Q ++ NVV  +V++N LC++G++ EA  +   M+  G++P+   Y++++ G C  G V
Sbjct: 446 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 505

Query: 182 NRAEELFVSMESMGCKH--NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  +LF  M+    K   +V +Y+IL N  C+   +  A+ L + ML +G  PD +  N
Sbjct: 506 DKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 565

Query: 240 ----------------TLFIGLFEIHQVER-----AFKLFDEMQRHGVAADTWAYRTFID 278
                            LF+    +  ++R     A ++ +EM    +  +   +   I 
Sbjct: 566 IFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQ 625

Query: 279 GLCKNGYIVEAVE 291
             CK   I E ++
Sbjct: 626 RTCKPKRIRETID 638



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 3/285 (1%)

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM---DQGVQPNVVSFNVIMNELCKNG 144
           D +    V ++NS+++      D++ A   ++ +     +G QPN++++N+I+  LCK G
Sbjct: 129 DLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLG 188

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           ++D A      M      P+ F Y+TLM+G C   RV+ A  L   M++ GC  N  +++
Sbjct: 189 QIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFN 248

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +LI+   KN ++  A  L   M  KG  P+ V YNTL  GL    ++++A  L ++M   
Sbjct: 249 VLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS 308

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
               +   Y T I+GL K     + V +  ++     + +   Y+ LI GL K G+ + A
Sbjct: 309 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENA 368

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L++ +       +VV Y   I  LC D K D+A D+  +M +K
Sbjct: 369 VRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413


>gi|302795973|ref|XP_002979749.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
 gi|300152509|gb|EFJ19151.1| hypothetical protein SELMODRAFT_111428 [Selaginella moellendorffii]
          Length = 388

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 190/351 (54%), Gaps = 11/351 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV  +N+++NG  R GH   AL     M          C P+ VTY T+ID   K    
Sbjct: 9   PNVVIFNSVVNGFARAGHLDGALGTLRMMRKAG------CNPDEVTYNTLIDVFHKLERF 62

Query: 77  DKAKELFLKMKDENINPNVV--TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           D A+EL  +M D  I P V+  TYN++I  FC   +  +AK +   M+D G +P+VV++N
Sbjct: 63  DSARELLEQMWDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPDVVTYN 122

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ LCK  + D+A   L+LM ++   PN   YNT+++G   + +   A+ L   M S+
Sbjct: 123 TLISGLCKLRRADDA---LQLMREMEPAPNTITYNTVINGLWRSRKDTEAQALLDEMISV 179

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  +V +Y+ +I   C+++E+E A+ ++  M  K  + D V + TL  G     ++E A
Sbjct: 180 GCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKKCEADEVTFATLVDGFLRDKRLEDA 239

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
               D M R G+ +D  +Y   ++ LC  G   +A E+F  +    Y   + +YN L+ G
Sbjct: 240 GGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLMVDRGYAPTLVSYNVLLKG 299

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           LCK+ R++ A  LFR +    +  DVV+Y  +I  LCA  ++D+A DLF D
Sbjct: 300 LCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRD 350



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/320 (30%), Positives = 162/320 (50%), Gaps = 7/320 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GC P+  TYNTLI+   +      A  L E+M +     GV+ +    TY  +I  
Sbjct: 37  MRKAGCNPDEVTYNTLIDVFHKLERFDSARELLEQMWDSGIRPGVMAE----TYNNVIAS 92

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            C+   V KAK +   M D    P+VVTYN+LI G C     ++A  L  EM      PN
Sbjct: 93  FCEVCNVRKAKGILELMIDSGCKPDVVTYNTLISGLCKLRRADDALQLMREMEP---APN 149

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            +++N ++N L ++ K  EA  LL+ MI +G   +   YN ++   C +  + +A ++F+
Sbjct: 150 TITYNTVINGLWRSRKDTEAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFL 209

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M    C+ +  +++ L++G+ ++K +E A      M   GI  DV  Y  L   L +  
Sbjct: 210 YMRKKKCEADEVTFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRG 269

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
             ++A ++F+ M   G A    +Y   + GLCK   +  A+ LFR ++  + + D+ +Y 
Sbjct: 270 SAQKACEIFNLMVDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQPDVVSYT 329

Query: 310 CLIDGLCKSGRLKIAWELFR 329
            +I GLC + R+  A +LFR
Sbjct: 330 TVIKGLCAARRIDEAIDLFR 349



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/187 (29%), Positives = 96/187 (51%), Gaps = 6/187 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   GC  +V TYN +I  LCR+     A+++F  M          C+ + V
Sbjct: 168 EAQALLDEMISVGCPFSVSTYNCVIANLCRSREMEKAVDVFLYMRKKK------CEADEV 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T++DG  ++  ++ A      M    I  +V +Y  L++  C      +A  +F  M
Sbjct: 222 TFATLVDGFLRDKRLEDAGGTLDWMARAGIPSDVKSYTKLLNALCDRGSAQKACEIFNLM 281

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P +VS+NV++  LCK  +++ A  L   M +  ++P+   Y T++ G C   R+
Sbjct: 282 VDRGYAPTLVSYNVLLKGLCKALRVEHALVLFREMQEREIQPDVVSYTTVIKGLCAARRI 341

Query: 182 NRAEELF 188
           + A +LF
Sbjct: 342 DEAIDLF 348



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 10/148 (6%)

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +L   + P+VVI+N++  G      ++ A      M++ G   D   Y T ID   K   
Sbjct: 2   ILGGAVAPNVVIFNSVVNGFARAGHLDGALGTLRMMRKAGCNPDEVTYNTLIDVFHKLER 61

Query: 286 IVEAVELFRTLRILKYELDIR------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
              A EL   +    ++  IR       YN +I   C+   ++ A  +   +       D
Sbjct: 62  FDSARELLEQM----WDSGIRPGVMAETYNNVIASFCEVCNVRKAKGILELMIDSGCKPD 117

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDME 367
           VVTYN +I  LC   + D A  L  +ME
Sbjct: 118 VVTYNTLISGLCKLRRADDALQLMREME 145



 Score = 38.5 bits (88), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 9/88 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +++    +P+V +Y T+I GLC       A++LF + +          +PN +T
Sbjct: 309 ALVLFREMQEREIQPDVVSYTTVIKGLCAARRIDEAIDLFRDPS--------FLEPNDIT 360

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           + T+  GL K G ++    +  + KD+N
Sbjct: 361 HETLRIGLEKSGRLEDYSSVTGR-KDQN 387


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/371 (33%), Positives = 202/371 (54%), Gaps = 15/371 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA +  ++ + G  P+  TY  L+NGLC+ G    A +LF  +           KP +V
Sbjct: 299 EAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----------KPTSV 348

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            + T+I G    G +D AK +   M     I P+V TYNSLI+G+        A  +  +
Sbjct: 349 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +PNV S+ ++++  CK GK+DEA  LL  M   G++PN   +N L+  FC   R
Sbjct: 409 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHR 468

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A E+F  M   GCK +V++++ LI+G C+  EI+ AL L  +M+S+G+  + V YNT
Sbjct: 469 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 528

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L        +++ A KL +EM   G   D   Y + I GLC+ G + +A  LF   ++L+
Sbjct: 529 LINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE--KMLR 586

Query: 301 YELDIRAYNC--LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             L   + +C  LI+GLC+SG ++ A E  + +       D+VT+N +I+ LC  G+++ 
Sbjct: 587 DGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIED 646

Query: 359 ARDLFLDMEAK 369
              +F  ++A+
Sbjct: 647 GLTMFRKLQAE 657



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/359 (33%), Positives = 192/359 (53%), Gaps = 11/359 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ + GC P+  T+N +I GLC+       +N   +M N     G    P+ +
Sbjct: 264 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDR----INEAAKMVNRMLIRGFT--PDDI 317

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G VD AK+LF ++      P  V +N+LIHGF      ++AK +  +M
Sbjct: 318 TYGYLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDM 373

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G+ P+V ++N ++    K G +  A  +L  M   G +PN + Y  L+DGFC  G+
Sbjct: 374 VTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGK 433

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  L   M + G K N   ++ LI+ +CK   I  A+ ++ EM  KG KPDV  +N+
Sbjct: 434 IDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 493

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL E+ +++ A  L  +M   GV A+T  Y T I+   + G I EA +L   +    
Sbjct: 494 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 553

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             LD   YN LI GLC++G +  A  LF  + R  L+   ++ NI+I+ LC  G +++A
Sbjct: 554 SLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEA 612



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 159/288 (55%), Gaps = 8/288 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A  +   +R  GC+PNV++Y  L++G C+ G    A NL  EM A+G        KPNTV
Sbjct: 402 ALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADG-------LKPNTV 454

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I   CKE  + +A E+F +M  +   P+V T+NSLI G C  ++   A  L  +M
Sbjct: 455 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 514

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV  N V++N ++N   + G++ EA +L+  M+  G   +   YN+L+ G C  G V
Sbjct: 515 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEV 574

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  LF  M   G   +  S +ILING C++  +E A+    EM+ +G  PD+V +N+L
Sbjct: 575 DKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 634

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
             GL    ++E    +F ++Q  G+  DT  Y T +  LCK G++ +A
Sbjct: 635 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDA 682



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 181/367 (49%), Gaps = 12/367 (3%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +   L +++R V+ CEP   +YN ++  L       VA N+F +M +          P  
Sbjct: 158 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK------IPPTL 211

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  ++  LC    VD A  +   M      PN V Y +LIH     N  NEA  L  E
Sbjct: 212 FTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 271

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+  +FN ++  LCK  +++EA++++  M+  G  P+   Y  LM+G C  GR
Sbjct: 272 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGR 331

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYN 239
           V+ A++LF  +     K     ++ LI+G+  +  ++ A ++ S+M+ S GI PDV  YN
Sbjct: 332 VDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 387

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  G ++   V  A ++  +M+  G   + ++Y   +DG CK G I EA  L   +   
Sbjct: 388 SLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSAD 447

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +   +NCLI   CK  R+  A E+FR +PR     DV T+N +I  LC   ++  A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507

Query: 360 RDLFLDM 366
             L  DM
Sbjct: 508 LWLLRDM 514



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 154/315 (48%), Gaps = 5/315 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P   +Y  +++ L        A  +F  M    I P + T+  ++   C  N+ + A 
Sbjct: 172 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSAL 231

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +  +M   G  PN V +  +++ L K  +++EA +LLE M  +G  P+A  +N ++ G 
Sbjct: 232 SVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 291

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   R+N A ++   M   G   +  +Y  L+NG CK   ++ A  L+  +     KP  
Sbjct: 292 CKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPTS 347

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VI+NTL  G     +++ A  +  +M   +G+  D   Y + I G  K G +  A+E+ R
Sbjct: 348 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLR 407

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +R    + ++ +Y  L+DG CK G++  A+ L   +    L  + V +N +I A C + 
Sbjct: 408 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEH 467

Query: 355 KMDKARDLFLDMEAK 369
           ++ +A ++F +M  K
Sbjct: 468 RIPEAVEIFREMPRK 482



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 140/252 (55%), Gaps = 6/252 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++   GC+P+V+T+N+LI+GLC       AL L  +M +     GVV   NTV
Sbjct: 471 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTV 524

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+   + G + +A++L  +M  +    + +TYNSLI G C A + ++A+ LF +M
Sbjct: 525 TYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKM 584

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P+ +S N+++N LC++G ++EA    + M+  G  P+   +N+L++G C  GR+
Sbjct: 585 LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 644

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                +F  +++ G   +  +Y+ L++  CK   +  A  L  E +  G  P+   ++ L
Sbjct: 645 EDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSIL 704

Query: 242 FIGLFEIHQVER 253
              L     ++R
Sbjct: 705 LQSLVPQETLDR 716


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 199/369 (53%), Gaps = 12/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  + +  CEP+V+TY TL++GLC+      A++L +EM          C P+ V
Sbjct: 217 DAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDG------CFPSPV 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+GLCK+G + +A +L   M  +   PN VTYN+LIHG C      +A  L   M
Sbjct: 271 TFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRM 330

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PNVV++  I+N L K G+  + + +L LM + G   N +VY+TL+ G    G+ 
Sbjct: 331 VSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKS 390

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G + N   YS +I+G C++ + + A+ + SEM +KG  P+    ++L
Sbjct: 391 QEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSL 450

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G FE     RA +++ +M +H    +   Y   I GLCK+G + EA+ ++  +     
Sbjct: 451 MKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGC 510

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL----PRGVLIADVVTYNIMIHALCADGKMD 357
           + D+ AY+ +I+GL  +G ++ A +L+  +    P      DVVTYNI+++ LC    + 
Sbjct: 511 KPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQ--PDVVTYNILLNTLCKQSSIS 568

Query: 358 KARDLFLDM 366
           +A DL   M
Sbjct: 569 RAIDLLNSM 577



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/372 (33%), Positives = 195/372 (52%), Gaps = 10/372 (2%)

Query: 2   EAAALFMKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A  LF ++   F C+    ++N+++N + + G    AL  +  +    G  GV   PN 
Sbjct: 143 KAVDLFDRMACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVI---GAKGVSISPNV 199

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T+  +I  +CK G VD A ++F  M      P+V TY +L+ G C A+  +EA  L  E
Sbjct: 200 LTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDE 259

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ V+FNV++N LCK G +  A++L++ M   G  PN   YNTL+ G CL G+
Sbjct: 260 MQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGK 319

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIYN 239
           + +A  L   M S  C  NV +Y  +ING  K  + ++GA  L + M  +G   +  +Y+
Sbjct: 320 LEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVL-ALMEERGYCVNEYVYS 378

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GLF+  + + A  LF EM   G   +T  Y   IDGLC++G   +AVE+   +   
Sbjct: 379 TLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMT-- 436

Query: 300 KYELDIRAYNC--LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  AY C  L+ G  ++G    A E+++ + +     + V Y+++IH LC DGK+ 
Sbjct: 437 NKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVK 496

Query: 358 KARDLFLDMEAK 369
           +A  ++  M  K
Sbjct: 497 EAMMVWTQMLGK 508



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 144/313 (46%), Gaps = 43/313 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AA L   + + GC PN  TYNTLI+GLC  G    A++L + M +        C PN V
Sbjct: 287 RAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSK------CVPNVV 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TII+GL K+G       +   M++     N   Y++LI G        EA  LF EM
Sbjct: 341 TYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEM 400

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF------ 175
             +G + N + ++ +++ LC++GK D+A  +L  M   G  PNA+  ++LM GF      
Sbjct: 401 TVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNS 460

Query: 176 -----------------------------CLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                        C  G+V  A  ++  M   GCK +V +YS +
Sbjct: 461 HRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSM 520

Query: 207 INGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ING      +E A+ LY+EML +G   +PDVV YN L   L +   + RA  L + M   
Sbjct: 521 INGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDR 580

Query: 265 GVAADTWAYRTFI 277
           G   D      F+
Sbjct: 581 GCDPDLVTCTIFL 593



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/297 (27%), Positives = 149/297 (50%), Gaps = 29/297 (9%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N + Y+TLI+GL + G +  A++LF+EM     E       NT+ Y+ +IDGLC++G  D
Sbjct: 373 NEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYEL------NTIVYSAVIDGLCRDGKPD 426

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A E+  +M ++   PN  T +SL+ GF  A + + A  ++ +M       N V ++V++
Sbjct: 427 DAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLI 486

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-- 195
           + LCK+GK+ EA  +   M+  G +P+   Y+++++G  + G V  A +L+  M   G  
Sbjct: 487 HGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPD 546

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI------------------ 237
            + +V +Y+IL+N  CK   I  A+ L + ML +G  PD+V                   
Sbjct: 547 SQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRMLREKLDPPQDG 606

Query: 238 ---YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
               + L + L +  +V  A K+ + M +  +      +   ++ LCK   +   ++
Sbjct: 607 REFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKPKKVQAVIQ 663



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 88/184 (47%), Gaps = 24/184 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  ++ ++   GC+P+V  Y+++INGL   G    A+ L+ EM       G   +P+ V
Sbjct: 497 EAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQ----GPDSQPDVV 552

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++ LCK+  + +A +L   M D   +P++VT                   +F+ M
Sbjct: 553 TYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCT-----------------IFLRM 595

Query: 122 MDQGVQPNVVS---FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           + + + P        + ++  L K  ++  AS+++E+M+Q  + P    +  +++  C  
Sbjct: 596 LREKLDPPQDGREFLDELVVRLLKRQRVLGASKIVEVMLQKLLPPKHSTWARVVENLCKP 655

Query: 179 GRVN 182
            +V 
Sbjct: 656 KKVQ 659


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 193/367 (52%), Gaps = 10/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--KPN 59
           EA  + +++   G +P   TYN LI+G  R G    A  + +EM        V C  + N
Sbjct: 303 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM--------VACGIEAN 354

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            + + T+++G+CK G ++KA E+  +M ++ + P+  TY+ LI G C   +   A  L  
Sbjct: 355 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 414

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  + + P V++++VI+N LC+ G +   + +L  M+  G++PNA VY TLM      G
Sbjct: 415 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 474

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           RV  +  +   M   G   +VF Y+ LI G+CK K +E A +   EML + ++P+   Y 
Sbjct: 475 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 534

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
               G  +  ++E A + F+EM   GV  +   Y   I+G CK G + EA  +FR +   
Sbjct: 535 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 594

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +   D++ Y+ LI GL ++G++  A+ +F  L    L+ +  TYN +I   C  G +DKA
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 654

Query: 360 RDLFLDM 366
             L  +M
Sbjct: 655 SQLLEEM 661



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 191/368 (51%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA    M++      PN  TY   I+G  + G   +A   F EM +     GV+  PN  
Sbjct: 513 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS----CGVL--PNVG 566

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +I+G CKEG V +A  +F  +    +  +V TY+ LIHG       +EA  +F E+
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN  ++N +++  CK G +D+AS+LLE M   G+ P+   YN L+DG C  G +
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA+ LF  +E  G   N  +Y+ +++GYCK+K    A  L  EML +G+ PD  IYN +
Sbjct: 687 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 746

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +  + E+A  LF EM   G A+ T ++ T I+G CK+G + EA  L   +   ++
Sbjct: 747 LNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 805

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   Y  LID  CK+G +  A  L+  +    ++    TY  ++H     G M +   
Sbjct: 806 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 865

Query: 362 LFLDMEAK 369
           LF +M AK
Sbjct: 866 LFEEMVAK 873



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 190/387 (49%), Gaps = 46/387 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P V TY+ +INGLCR G+      +  EM  NG        KPN V YTT++    KEG 
Sbjct: 423 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-------LKPNAVVYTTLMTAHAKEGR 475

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V++++ +  +M+++ I P+V  YNSLI GFC A    EA+   +EM+++ ++PN  ++  
Sbjct: 476 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 535

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE--------- 186
            ++   K G+M+ A R    M+  GV PN  +Y  L++G C  G V  A           
Sbjct: 536 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 595

Query: 187 --------------------------LFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                                     +F  ++  G   N F+Y+ LI+G CK   ++ A 
Sbjct: 596 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 655

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EM  KGI PD+V YN L  GL +  ++ERA  LFD+++  G+  +   Y   +DG 
Sbjct: 656 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 715

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIAD 339
           CK+     A +L   + +     D   YN +++  CK  + + A +LF+  L +G   A 
Sbjct: 716 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG--FAS 773

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
            V++N +I   C  GK+ +A  L  +M
Sbjct: 774 TVSFNTLIEGYCKSGKLQEANHLLEEM 800



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 210/405 (51%), Gaps = 45/405 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  + +++   GC PN+ TYN +I GLCR      A+ L   M +     G+V  P+  
Sbjct: 233 DAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDK----GLV--PDLY 286

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+G C E    +AK + L+M D  + P  +TYN+LI GF    D  +A  +  EM
Sbjct: 287 TYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM 346

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++ N++ +N ++N +CK GKM++A  +++ M++ GV P++  Y+ L++G C    +
Sbjct: 347 VACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNM 406

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA EL   M+       V +YS++ING C+   ++G  ++  EM+  G+KP+ V+Y TL
Sbjct: 407 ARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTL 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------NGYIVEAVELFR 294
                +  +VE +  + + M+  G+  D + Y + I G CK         Y++E +E  R
Sbjct: 467 MTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE--R 524

Query: 295 TLRILKY-------------ELDIR-----------------AYNCLIDGLCKSGRLKIA 324
            LR   +             E++I                   Y  LI+G CK G +  A
Sbjct: 525 RLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEA 584

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +FR +    ++ DV TY+++IH L  +GKM +A  +F +++ K
Sbjct: 585 FSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 629



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 191/388 (49%), Gaps = 41/388 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E N+  +NTL+NG+C+ G    AL + +EM     E GV  +P++ TY+ +I+G C+ 
Sbjct: 350 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM----EKGV--EPDSQTYSLLIEGHCRG 403

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A EL  +MK   + P V+TY+ +I+G C   +      +  EM+  G++PN V +
Sbjct: 404 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 463

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M    K G+++E+  +LE M + G+ P+ F YN+L+ GFC   R+  A    + M  
Sbjct: 464 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG--------- 244
              + N  +Y   I+GY K  E+E A   ++EMLS G+ P+V IY  L  G         
Sbjct: 524 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 583

Query: 245 ---LFE-----------------IHQVER------AFKLFDEMQRHGVAADTWAYRTFID 278
              +F                  IH + R      AF +F E+Q  G+  + + Y + I 
Sbjct: 584 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G CK G + +A +L   + I     DI  YN LIDGLCK+G ++ A  LF  +    L  
Sbjct: 644 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           + VTY  M+   C       A  L  +M
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEM 731



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 194/366 (53%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F+  + F   P++ + N+L+  L +       + LF ++ +G     V+  P+ 
Sbjct: 162 VEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNK----VELFWKVFDGMCAHKVL--PDV 215

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TYT +I   CK G V  AK + L+M ++  +PN+VTYN +I G C A   +EA  L   
Sbjct: 216 YTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRS 275

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G+ P++ ++++++N  C   +  EA  +L  MI +G++P    YN L+DGF   G 
Sbjct: 276 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 335

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A  +   M + G + N+  ++ L+NG CK  ++E AL +  EM+ KG++PD   Y+ 
Sbjct: 336 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 395

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      + RAF+L DEM++  +A     Y   I+GLC+ G +     + R + +  
Sbjct: 396 LIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNG 455

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +   Y  L+    K GR++ +  +   +    ++ DV  YN +I   C   +M++AR
Sbjct: 456 LKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEAR 515

Query: 361 DLFLDM 366
              ++M
Sbjct: 516 TYLMEM 521



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 181/365 (49%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +L+  G  PN FTYN+LI+G C+ G+   A  L EEM            P+ V
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG------INPDIV 671

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +IDGLCK G +++AK LF  ++   + PN VTY +++ G+C + +   A  L  EM
Sbjct: 672 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 731

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV P+   +NVI+N  CK  K ++A  L + M++ G   +   +NTL++G+C +G++
Sbjct: 732 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKL 790

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M       N  +Y+ LI+  CK   +  A  L+ EM  + + P    Y +L
Sbjct: 791 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 850

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   I  +     LF+EM   G+  D   Y   ID  C+ G ++EA +L   + +   
Sbjct: 851 LHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 910

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            + + AY+ LI  LCK        +L   +        + T +++       G MD+A +
Sbjct: 911 PMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAE 970

Query: 362 LFLDM 366
           +   M
Sbjct: 971 VLRSM 975



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 172/338 (50%), Gaps = 35/338 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKD----------------------------- 88
           PN+V +  ++D   K GF+ +A  +FL  K+                             
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 89  ------ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
                   + P+V TY ++I   C   +  +AK + +EM ++G  PN+V++NVI+  LC+
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
              +DEA  L   M+  G+ P+ + Y+ L++GFC+  R   A+ + + M  +G K    +
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ LI+G+ +  +IE A  +  EM++ GI+ +++I+NTL  G+ +  ++E+A ++  EM 
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             GV  D+  Y   I+G C+   +  A EL   ++  K    +  Y+ +I+GLC+ G L+
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
               + R +    L  + V Y  ++ A   +G+++++R
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 135/277 (48%), Gaps = 7/277 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++ + G  P+ F YN ++N  C+      AL+LF+EM     E G     +TV+
Sbjct: 724 AFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML----EKGFA---STVS 776

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+I+G CK G + +A  L  +M ++   PN VTY SLI   C A    EAK L++EM 
Sbjct: 777 FNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQ 836

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ V P   ++  +++     G M E S L E M+  G+ P+   Y  ++D +C  G V 
Sbjct: 837 ERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVM 896

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L   +   G   +V +Y  LI   CK +E    L L +E+   G +  +   + + 
Sbjct: 897 EACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIA 956

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
            G      ++ A ++   M + G  ++T +    +DG
Sbjct: 957 RGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 993



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 140/280 (50%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N +PN V ++ L+  +       EA  +F+   +   +P+++S N ++ +L K  K++  
Sbjct: 140 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 199

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
            ++ + M    V P+ + Y  ++   C  G V  A+ + + M   GC  N+ +Y+++I G
Sbjct: 200 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGG 259

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C+ + ++ A+ L   M+ KG+ PD+  Y+ L  G     +   A  +  EM   G+  +
Sbjct: 260 LCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPE 319

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   IDG  + G I +A  +   +     E ++  +N L++G+CK+G+++ A E+ +
Sbjct: 320 PITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQ 379

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +    +  D  TY+++I   C    M +A +L  +M+ +
Sbjct: 380 EMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419



 Score = 77.8 bits (190), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 6/210 (2%)

Query: 17   PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
            PN  TY +LI+  C+ G    A  L+ EM   N        P   TYT+++ G    G +
Sbjct: 807  PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN------VMPTAKTYTSLLHGYHNIGNM 860

Query: 77   DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             +   LF +M  + I P+ +TY  +I  +C   +  EA  L  E++ +G+  +V +++ +
Sbjct: 861  SEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDAL 920

Query: 137  MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
            +  LCK  +  E  +LL  + + G R      + +  GF + G ++ A E+  SM   G 
Sbjct: 921  IQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGW 980

Query: 197  KHNVFSYSILINGYCKNKEIEGALSLYSEM 226
              N  S   L++G       E + +L  +M
Sbjct: 981  VSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010


>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 524

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/373 (33%), Positives = 191/373 (51%), Gaps = 23/373 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   N  +Y  LINGLC+ G T  AL +  ++       G +   N V Y+TIID LCKE
Sbjct: 148 GFRLNEVSYGILINGLCKMGETRAALQVLRKID------GKLVNTNVVMYSTIIDSLCKE 201

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V +A EL+ +M  + ++P+VVT+++LI+GFC    + EA  LF EM+   + P+V +F
Sbjct: 202 KLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTF 261

Query: 134 NVIMNELCKNGKMDEASRLLELMIQ--------------IGVR---PNAFVYNTLMDGFC 176
           N++++ LCK G   E   +L +M++              IG R   P+   Y  ++   C
Sbjct: 262 NILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLC 321

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
               V+ A  LF  M   G   +  +YS LI+G CK++ I  A  L  +M ++G   DV+
Sbjct: 322 KIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVI 381

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y +    L + HQV++A  L  +++  G+  +   Y   IDGLCK G    A  +F+ L
Sbjct: 382 TYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDL 441

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            I  Y++ +  YN +I+GLC  G    A  L   +       DVVTY  +I AL  + + 
Sbjct: 442 LIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKNDEN 501

Query: 357 DKARDLFLDMEAK 369
            KA  L  +M A+
Sbjct: 502 HKAEKLLREMIAR 514



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/411 (31%), Positives = 205/411 (49%), Gaps = 46/411 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG-------------- 48
           A +L+ +L++    P++ T+NT+IN  C  G    A ++  ++                 
Sbjct: 67  AISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIK 126

Query: 49  ----NGEF--------GVVCKP---NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
               NG+          V+ +    N V+Y  +I+GLCK G    A ++  K+  + +N 
Sbjct: 127 GLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGLCKMGETRAALQVLRKIDGKLVNT 186

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           NVV Y+++I   C      EA  L+ +M+ + V P+VV+F+ ++   C  G+  EA  L 
Sbjct: 187 NVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLF 246

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTG-----------------RVNRAEELFVSMESMGC 196
             M+   + P+   +N L+D  C  G                 +VN+A+ +F  +     
Sbjct: 247 HEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNIIGKRRV 306

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V SY+I+I   CK K ++ ALSL++EM  KGI PD V Y++L  GL +  ++  A++
Sbjct: 307 TPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERISHAWE 366

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D+M   G  AD   Y +F+  LCKN  + +AV L + ++    + +I  YN LIDGLC
Sbjct: 367 LLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNILIDGLC 426

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           K GR + A  +F+ L        V TYNIMI+ LC +G  D+A  L   ME
Sbjct: 427 KEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKME 477



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/336 (29%), Positives = 160/336 (47%), Gaps = 25/336 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++ V    P+V T++ LI G C  G    A  LF EM   N        P+  
Sbjct: 206 EAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTN------INPDVC 259

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D LCKEG   + K +   M  E                   N  N+AK +F  +
Sbjct: 260 TFNILVDALCKEGSTKETKNVLAVMMKE------------------VNQVNKAKHVFNII 301

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + V P+V S+ +I+  LCK   +DEA  L   M   G+ P+   Y++L+DG C + R+
Sbjct: 302 GKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSERI 361

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M + G   +V +Y+  ++  CKN +++ A++L  ++  +GI+P++  YN L
Sbjct: 362 SHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNIL 421

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  + E A  +F ++   G     W Y   I+GLC  G   EA+ L   +     
Sbjct: 422 IDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNGC 481

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             D+  Y  +I  L K+     A +L R +  RG+L
Sbjct: 482 TPDVVTYETIIRALFKNDENHKAEKLLREMIARGLL 517



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 158/356 (44%), Gaps = 54/356 (15%)

Query: 58  PNTVTYTTIIDGLCKEGFVDK--AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           P+ + +  I+  L K    +   A  L+ +++   I P++VT+N++I+ +C+  + + A 
Sbjct: 44  PSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFAF 103

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +  +++  G  P+ ++   ++  LC NGK+ EA    + +I  G R N   Y  L++G 
Sbjct: 104 SVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVIARGFRLNEVSYGILINGL 163

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G    A ++   ++      NV  YS +I+  CK K +  A  LYS+M+ K + PDV
Sbjct: 164 CKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMIVKKVSPDV 223

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE------- 288
           V ++ L  G   + Q + AF LF EM    +  D   +   +D LCK G   E       
Sbjct: 224 VTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAV 283

Query: 289 ---------------------------------------------AVELFRTLRILKYEL 303
                                                        A+ LF  +R      
Sbjct: 284 MMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITP 343

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           D   Y+ LIDGLCKS R+  AWEL   +      ADV+TY   +HALC + ++DKA
Sbjct: 344 DKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKA 399



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 150/284 (52%), Gaps = 11/284 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-------FGV 54
           EA  LF ++ +    P+V T+N L++ LC+ G T    N+   M     +       F +
Sbjct: 241 EAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTKETKNVLAVMMKEVNQVNKAKHVFNI 300

Query: 55  VCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
           + K    P+  +YT II  LCK   VD+A  LF +M+ + I P+ VTY+SLI G C +  
Sbjct: 301 IGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLIDGLCKSER 360

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            + A  L  +M  +G   +V+++   ++ LCKN ++D+A  L++ +   G++PN   YN 
Sbjct: 361 ISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQPNINTYNI 420

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L+DG C  GR   A+ +F  +   G K  V++Y+I+ING C     + A++L  +M   G
Sbjct: 421 LIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMEDNG 480

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
             PDVV Y T+   LF+  +  +A KL  EM   G+  +    R
Sbjct: 481 CTPDVVTYETIIRALFKNDENHKAEKLLREMIARGLLEEKVEIR 524


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 190/365 (52%), Gaps = 11/365 (3%)

Query: 10  LRVFGC-----EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           L VFG      +PN+ TYN +I  LC+ G    A++ F EM   N      C P+  TY+
Sbjct: 184 LHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREMPLKN------CNPDVFTYS 237

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+++GLCKE  VD+A  L  +M+ E   PN VT+N LI       D + A  L   M  +
Sbjct: 238 TLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLK 297

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  PN V++N +++ LC  GK+D+A  LLE M+     PN   Y T+++G     R    
Sbjct: 298 GCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDG 357

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             + +SME  G K N + YS LI+G  K  + E A+ L+ EM  KG KP+VV+Y     G
Sbjct: 358 VHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDG 417

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    + + A  +  EM   G   + + Y + + G  K G   +A+ +++ +       +
Sbjct: 418 LCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHN 477

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +   + L++GLC+SGRL+ A  ++  +    L  DVV Y+ MI  LC  G +DK   LF 
Sbjct: 478 VVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFY 537

Query: 365 DMEAK 369
           +M+ +
Sbjct: 538 EMQCQ 542



 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/369 (32%), Positives = 195/369 (52%), Gaps = 14/369 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A   F ++ +  C P+VFTY+TL+NGLC+      A+ L +EM A G       C PN V
Sbjct: 217 AVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG-------CLPNPV 269

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID L K G + +A +L   M  +   PN VTYN+LIHG C     ++A  L  +M
Sbjct: 270 TFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKM 329

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN V++  I+N L K  + ++   +L  M + G + N ++Y++L+ G    G+ 
Sbjct: 330 VSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKS 389

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   GCK NV  Y   I+G C++++ + A  +  EMLSKG  P+   Y++L
Sbjct: 390 ENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+    ++A  ++ EM    +  +       ++GLC++G + EA+ ++  +     
Sbjct: 450 MKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGL 509

Query: 302 ELDIRAYNCLIDGLCKSGR----LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           + D+ AY+ +I GLC  G     LK+ +E+    P+     DVVTYNI+ +ALC    + 
Sbjct: 510 KPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSR--PDVVTYNILFNALCRQDNLT 567

Query: 358 KARDLFLDM 366
           +A DL   M
Sbjct: 568 RAIDLLNSM 576



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 168/332 (50%), Gaps = 43/332 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +++  GC PN  T+N LI+ L + G    A  L + M      F   C PN V
Sbjct: 251 EAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNM------FLKGCVPNEV 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------- 106
           TY T+I GLC +G +DKA  L  KM      PN VTY ++I+G                 
Sbjct: 305 TYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSM 364

Query: 107 -----YANDW----------NEAKC-----LFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                 AN++           E K      L+ EM ++G +PNVV +   ++ LC++ K 
Sbjct: 365 EERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKP 424

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA  +L+ M+  G  PNAF Y++LM GF   G   +A  ++  M S   +HNV   S+L
Sbjct: 425 DEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVL 484

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM--QRH 264
           +NG C++  +  AL++++ ML +G+KPDVV Y+++  GL ++  V++  KLF EM  Q  
Sbjct: 485 LNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEP 544

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
               D   Y    + LC+   +  A++L  ++
Sbjct: 545 KSRPDVVTYNILFNALCRQDNLTRAIDLLNSM 576



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 159/325 (48%), Gaps = 8/325 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM---KDENINPN 94
           A+N F  MAN      + CK    ++ ++++ + +EG    A + +L +     +   PN
Sbjct: 143 AVNFFHRMAND-----LHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPN 197

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           ++TYN +I   C     + A   F EM  +   P+V +++ +MN LCK  ++DEA  LL+
Sbjct: 198 LLTYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLD 257

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G  PN   +N L+D     G ++RA +L  +M   GC  N  +Y+ LI+G C   
Sbjct: 258 EMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKG 317

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +++ ALSL  +M+S    P+ V Y T+  GL +  + E    +   M+  G  A+ + Y 
Sbjct: 318 KLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYS 377

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           + I GL K G    AV L++ +     + ++  Y   IDGLC+  +   A ++ + +   
Sbjct: 378 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437

Query: 335 VLIADVVTYNIMIHALCADGKMDKA 359
             + +  TY+ ++      G   KA
Sbjct: 438 GFLPNAFTYSSLMKGFFKKGDSQKA 462



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 158/313 (50%), Gaps = 29/313 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +   + M +   G + N + Y++LI+GL + G +  A+ L++EMA         CKPN V
Sbjct: 356 DGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKG------CKPNVV 409

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   IDGLC++   D+A+++  +M  +   PN  TY+SL+ GF    D  +A  ++ EM
Sbjct: 410 VYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEM 469

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M Q ++ NVV  +V++N LC++G++ EA  +   M+  G++P+   Y++++ G C  G V
Sbjct: 470 MSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSV 529

Query: 182 NRAEELFVSMESMGCKH--NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  +LF  M+    K   +V +Y+IL N  C+   +  A+ L + ML +G  PD +  N
Sbjct: 530 DKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCN 589

Query: 240 ----------------TLFIGLFEIHQVER-----AFKLFDEMQRHGVAADTWAYRTFID 278
                            LF+    +  ++R     A ++ +EM    +  +   +   I 
Sbjct: 590 IFLETLRERINPPQDGRLFLDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRVIQ 649

Query: 279 GLCKNGYIVEAVE 291
             CK   I E ++
Sbjct: 650 RTCKPKRIRETID 662



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 143/285 (50%), Gaps = 3/285 (1%)

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM---DQGVQPNVVSFNVIMNELCKNG 144
           D +    V ++NS+++      D++ A   ++ +     +G QPN++++N+I+  LCK G
Sbjct: 153 DLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLG 212

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           ++D A      M      P+ F Y+TLM+G C   RV+ A  L   M++ GC  N  +++
Sbjct: 213 QIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFN 272

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +LI+   KN ++  A  L   M  KG  P+ V YNTL  GL    ++++A  L ++M   
Sbjct: 273 VLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS 332

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
               +   Y T I+GL K     + V +  ++     + +   Y+ LI GL K G+ + A
Sbjct: 333 KCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENA 392

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L++ +       +VV Y   I  LC D K D+A D+  +M +K
Sbjct: 393 VRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 189/351 (53%), Gaps = 9/351 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           +G  P V  YN LIN  C+ G    A  +F E+           +P TV++ T+I+GLCK
Sbjct: 217 YGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG------LRPTTVSFNTLINGLCK 270

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +D+   L   M++  I P+V TY+ LIHG C     + A+ LF EM  +G++PN ++
Sbjct: 271 SRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGIT 330

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F  +++   ++ +MD A      M+ +GV+P+  +YNTL++G C  G VN+A +L   M+
Sbjct: 331 FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMK 390

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            +G K +  +Y+ LI+GYCK  ++E A+ +   M  +G+  D V +  L  G     +V 
Sbjct: 391 MVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVR 450

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +   EM   G+  D   Y   IDG CK G +    +L + ++I  ++  +  YN L+
Sbjct: 451 DAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLM 510

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +GLCK G++K A  L  ++    +  D +TYNI++   C +G   KA DL 
Sbjct: 511 NGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLL 558



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/346 (31%), Positives = 182/346 (52%), Gaps = 9/346 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G  P   ++NTLINGLC++ +      L + M            P+  
Sbjct: 241 DAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR------IYPDVF 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I GLCKEG +D A++LF +M+   + PN +T+ +LI G   +   + A   + +M
Sbjct: 295 TYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+P++V +N ++N LCK G +++A +L++ M  +G++P+   Y TL+DG+C  G +
Sbjct: 355 LTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDL 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+   M   G   +  +++ LI+G+C++  +  A     EM+  G+KPD   Y  +
Sbjct: 415 ESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMV 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V+  FKL  EMQ +G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 475 IDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGV 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
             D   YN L++G CK+G+   A +L +      LI D   Y  ++
Sbjct: 535 TPDDITYNILLEGHCKNGK---AEDLLKLRNEKGLIVDYAYYTSLV 577



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 157/275 (57%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P V  YN LI+ FC      +AK +F E+  +G++P  VSFN ++N LCK+  +DE  RL
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M +  + P+ F Y+ L+ G C  GR++ AE+LF  M+  G + N  +++ LI+G  +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           ++ ++ A++ Y +ML+ G+KPD+V+YNTL  GL ++  V +A KL DEM+  G+  D   
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T IDG CK G +  A+E+ + +      LD  A+  LI G C+ GR++ A    R + 
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +  D  TY ++I   C  G +     L  +M+
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 118/263 (44%), Gaps = 35/263 (13%)

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF-------VSME 192
           + + GK   AS    ++   G R + FV++ LM  +  +G V+ A + F         + 
Sbjct: 128 VSRKGKDSAASVFAAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIP 187

Query: 193 SMGCKH----------------------------NVFSYSILINGYCKNKEIEGALSLYS 224
             GC +                             V  Y+ILIN +CK   I  A  +++
Sbjct: 188 FHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFN 247

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E+  +G++P  V +NTL  GL +   ++  F+L   M+ + +  D + Y   I GLCK G
Sbjct: 248 EIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEG 307

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +  A +LF  ++      +   +  LIDG  +S R+  A   +  +    +  D+V YN
Sbjct: 308 RLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYN 367

Query: 345 IMIHALCADGKMDKARDLFLDME 367
            +++ LC  G ++KAR L  +M+
Sbjct: 368 TLLNGLCKVGDVNKARKLVDEMK 390


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/396 (31%), Positives = 201/396 (50%), Gaps = 29/396 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A  +F ++   GC+PN  TY+TLINGLC  G    AL++ EEM     E  V        
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 56  ----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                 C+PN  TYT +I GL + G ++ A  L+ KM  E + P
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP 371

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N VTYN+LI+  C    ++ A  +F  M   G   N  ++N I+  LC  G +++A  L 
Sbjct: 372 NTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLF 431

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           E M+++G  P    YNTL++G+   G VN A  L   M+  GC+ + ++Y+ L++G+ K 
Sbjct: 432 EKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKW 491

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            ++E A   + EM+  G+ P+ V Y  L  G  +  +V+ A  L   M+  G   +  +Y
Sbjct: 492 GKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESY 551

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I+GL K     EA ++   +       ++  Y  LIDGLC++GR + A+++F  + +
Sbjct: 552 NAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK 611

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              + ++ TY+ +I+ LC +GK D+A  L  +ME K
Sbjct: 612 RKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERK 647



 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 186/354 (52%), Gaps = 6/354 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +++  GC PNV TY  LI+GL R G   VA+ L+ +M       G+V  PNTVTY  
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNA 378

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+ LC  G    A ++F  M+      N  TYN +I G C   D  +A  LF +M+  G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P VV++N ++N     G ++ A+RLL+LM + G  P+ + YN L+ GF   G++  A 
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F  M   G   N  SY+ LI+G+ K+ +++ ALSL   M   G  P+V  YN +  GL
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            + ++   A K+ D+M   G+  +   Y T IDGLC+NG    A ++F  +   K   ++
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             Y+ LI GLC+ G+   A  L + + R  L  D VT+  +I      G++D A
Sbjct: 619 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 672



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 196/403 (48%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++  +   P+VFTY +LI G CR  +  +A  +F+ M          C PN+V
Sbjct: 216 EAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG------CDPNSV 269

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+I+GLC EG VD+A ++  +M ++ I P V TY   I   C      EA  L   M
Sbjct: 270 TYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARM 329

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +PNV ++  +++ L + GK++ A  L   M++ G+ PN   YN L++  C+ GR 
Sbjct: 330 KKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRF 389

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  ME  G   N  +Y+ +I G C   +IE A+ L+ +ML  G  P VV YNTL
Sbjct: 390 STALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTL 449

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTW------------------------------ 271
             G      V  A +L D M+ +G   D W                              
Sbjct: 450 INGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGL 509

Query: 272 -----AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                +Y   IDG  K+G +  A+ L + +  +    ++ +YN +I+GL K  R   A +
Sbjct: 510 NPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEK 569

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +   +    L+ +V+TY  +I  LC +G+   A  +F DME +
Sbjct: 570 ICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/348 (34%), Positives = 177/348 (50%), Gaps = 6/348 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ K+   G  PN  TYN LIN LC  G    AL +F  M  G+G        NT T
Sbjct: 357 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQT 410

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  II GLC  G ++KA  LF KM      P VVTYN+LI+G+    + N A  L   M 
Sbjct: 411 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G +P+  ++N +++   K GK++ AS   + M++ G+ PN   Y  L+DG    G+V+
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   ME MGC  NV SY+ +ING  K      A  +  +M+ +G+ P+V+ Y TL 
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLI 590

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL    + + AFK+F +M++     + + Y + I GLC+ G   EA  L + +      
Sbjct: 591 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 650

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            D   +  LIDG    GR+  A+ L R +       +  TY++++  L
Sbjct: 651 PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGL 698



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 181/349 (51%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           ++++ NTL+  L +      A NL+++M N         +P+ +T+ T+I+ L K+G V 
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG------IQPSLLTFNTLINILSKKGKVR 215

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+ +  ++   +++P+V TY SLI G C   + + A  +F  M+ +G  PN V+++ ++
Sbjct: 216 EAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLI 275

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LC  G++DEA  +LE MI+ G+ P  + Y   +   C       A EL   M+  GC+
Sbjct: 276 NGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCR 335

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LI+G  +  ++E A+ LY +ML +G+ P+ V YN L   L    +   A K+
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M+ HG  A+T  Y   I GLC  G I +A+ LF  +  +     +  YN LI+G   
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G +  A  L   +       D  TYN ++      GK++ A   F +M
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/287 (34%), Positives = 145/287 (50%), Gaps = 6/287 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G  P V TYNTLING    G+   A  L + M   NG     C+P+  
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE-NG-----CEPDEW 479

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G  K G ++ A   F +M +  +NPN V+Y +LI G       + A  L   M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PNV S+N ++N L K  +  EA ++ + M++ G+ PN   Y TL+DG C  GR 
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  ME   C  N+++YS LI G C+  + + A  L  EM  KG+ PD V + +L
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 659

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             G   + +++ AF L   M   G   +   Y   + GL K   ++E
Sbjct: 660 IDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 130/249 (52%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+   G   ++ S N ++ +L K   ++ A  L + M+  G++P+   +NTL++     G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V  AE +   +       +VF+Y+ LI G+C+N+ ++ A  ++  M+ +G  P+ V Y+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL    +V+ A  + +EM   G+    + Y   I  LC   +  EA+EL   ++  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +++ Y  LI GL + G+L++A  L+  + +  L+ + VTYN +I+ LC  G+   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 360 RDLFLDMEA 368
             +F  ME 
Sbjct: 393 LKIFHWMEG 401


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/364 (32%), Positives = 191/364 (52%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F ++   G    ++ YN+LING C+ G    A  L+ +M N   E      P   T
Sbjct: 412 AESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLE------PTATT 465

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT+I G CK+  V+KA +L+ +M ++ I P+V T+ +LI+G C  N+  EA  LF EM+
Sbjct: 466 FTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMV 525

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ ++P  V++NV++   CK   MD+A  LLE M+  G+ P+ + Y  L+ G C TGRV+
Sbjct: 526 ERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVS 585

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++    +     K N   YS L++GYC    +  ALS   EM+ +GI  D+V +  L 
Sbjct: 586 AAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLI 645

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +   ++R F L  +M   G+  D+  Y + ID   K G   ++ E    +   K  
Sbjct: 646 DGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCF 705

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  Y   ++GLCK G +  A  LF  +    +  + VTY   + +L  +G M +A DL
Sbjct: 706 PNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL 765

Query: 363 FLDM 366
             +M
Sbjct: 766 HHEM 769



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 182/359 (50%), Gaps = 6/359 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +   LR  G + +V TY TL+ G CR       + L  EM     E G V  P  
Sbjct: 270 LEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMV----ELGFV--PTE 323

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
              + ++DGL K+G +D A +L +K+      PN+  YN+LI+  C   D ++A+ L+  
Sbjct: 324 AAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKN 383

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    +  N V+++++++  CK G +D A      MI+ G+R   + YN+L++G C  G 
Sbjct: 384 MHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGD 443

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE L+  M + G +    +++ LI+GYCK+ ++E A  LY EM  K I P V  +  
Sbjct: 444 LSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTA 503

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL   +++  A KLFDEM    +      Y   I+G CK   + +A EL   +    
Sbjct: 504 LIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNG 563

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              D   Y  LI GLC +GR+  A +    L +  L  + + Y+ ++H  C  G++ +A
Sbjct: 564 LVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEA 622



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 195/421 (46%), Gaps = 72/421 (17%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT---------------- 60
           P V T + ++NGL R    I+   +F+E  N     GV   P T                
Sbjct: 181 PEVRTLSAILNGLLRIRKFILVWEVFDESVNA----GVKPDPYTCSAVIRSLCELKDFCR 236

Query: 61  -----------------VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH 103
                            VTY  +I GLCK G V +A E+   ++++ +  +VVTY +L+ 
Sbjct: 237 AKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVL 296

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           GFC    +++  CL  EM++ G  P   + + +++ L K G +D A  L+  + + G  P
Sbjct: 297 GFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLP 356

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESM----------------------------- 194
           N FVYN L++  C    +++AE L+ +M SM                             
Sbjct: 357 NLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYF 416

Query: 195 ------GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
                 G +  ++ Y+ LING+CK  ++  A  LY++M+++G++P    + TL  G  + 
Sbjct: 417 GRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKD 476

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            QVE+AFKL+ EM    +A   + +   I GLC    + EA +LF  +   K +     Y
Sbjct: 477 LQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTY 536

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N +I+G CK+  +  A+EL   +    L+ D  TY  +I  LC+ G++  A+D   D+  
Sbjct: 537 NVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHK 596

Query: 369 K 369
           K
Sbjct: 597 K 597



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 189/368 (51%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ LF ++     +P   TYN +I G C+  +   A  L E+M +     G+V  P+T 
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHN----GLV--PDTY 569

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLC  G V  AK+    +  +N+  N + Y++L+HG+C      EA     EM
Sbjct: 570 TYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEM 629

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  ++V   V+++   K   M     LL+ M   G+RP++ +Y +++D +   G  
Sbjct: 630 IQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSF 689

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            ++ E    M +  C  NV +Y+  +NG CK  EI+ A  L+ +ML+  I P+ V Y   
Sbjct: 690 KKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCF 749

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   ++ A  L  EM + G+ A+T  Y   I G CK G ++EA ++   +     
Sbjct: 750 LDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGI 808

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y+ +I   C+SG +  A EL+ ++ R  +  D V +N++I+  C +G +DKA +
Sbjct: 809 FPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFE 868

Query: 362 LFLDMEAK 369
           L  DM ++
Sbjct: 869 LRNDMLSR 876



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 182/364 (50%), Gaps = 7/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ K+   G EP   T+ TLI+G C+      A  L+ EM            P+  T
Sbjct: 447 AEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKE------IAPSVYT 500

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T +I GLC    + +A +LF +M +  I P  VTYN +I G+C A++ ++A  L  +M+
Sbjct: 501 FTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDML 560

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  ++  +++ LC  G++  A   ++ + +  ++ N   Y+ L+ G+C  GR+ 
Sbjct: 561 HNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLT 620

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A      M   G   ++  +++LI+G  K ++++    L  +M  +G++PD VIY ++ 
Sbjct: 621 EALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMI 680

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +    +++ +  D M       +   Y  F++GLCK G I  A  LF  +      
Sbjct: 681 DAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANIS 740

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   Y C +D L K G +K A +L   + +G L+A+  TYNI+I   C  G++ +A  +
Sbjct: 741 PNSVTYGCFLDSLTKEGNMKEATDLHHEMLKG-LLANTATYNILIRGFCKLGRLIEATKV 799

Query: 363 FLDM 366
             +M
Sbjct: 800 LSEM 803



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 167/365 (45%), Gaps = 42/365 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP--------------- 58
           G  P+ +TY  LI+GLC TG    A +  +++   N +   +C                 
Sbjct: 563 GLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEA 622

Query: 59  --------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                         + V +  +IDG  K+  + +   L  KM D+ + P+ V Y S+I  
Sbjct: 623 LSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDA 682

Query: 105 FCYANDWNEA-KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           +     + ++ +CL + M+ +   PNVV++   MN LCK G++D A  L E M+   + P
Sbjct: 683 YSKEGSFKKSGECLDL-MVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISP 741

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N+  Y   +D     G +  A +L   M   G   N  +Y+ILI G+CK   +  A  + 
Sbjct: 742 NSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVL 800

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           SEM   GI PD + Y+T+         V  A +L+D M R GV  D+ A+   I G C N
Sbjct: 801 SEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVN 860

Query: 284 GYIVEAVEL--------FRTLRILKYE-LDIRAYNCLIDGLCKSGRLKIAWELFRS-LPR 333
           G + +A EL         +  +IL+ +  D+   N L+ G C +G +  A  L+ S L R
Sbjct: 861 GALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSMLTR 920

Query: 334 GVLIA 338
            V ++
Sbjct: 921 AVKLS 925



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 151/332 (45%), Gaps = 39/332 (11%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--------------------- 56
           N   Y+ L++G C  G    AL+   EM        +VC                     
Sbjct: 602 NEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLL 661

Query: 57  --------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 108
                   +P++V YT++ID   KEG   K+ E    M  E   PNVVTY + ++G C  
Sbjct: 662 KKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKV 721

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
            + + A  LF +M+   + PN V++   ++ L K G M EA+ L   M++ G+  N   Y
Sbjct: 722 GEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATY 780

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L+ GFC  GR+  A ++   M   G   +  +YS +I  +C++ ++  A+ L+  ML 
Sbjct: 781 NILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLR 840

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA---------DTWAYRTFIDG 279
           KG++PD V +N L  G      +++AF+L ++M   G+           D       + G
Sbjct: 841 KGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHG 900

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            C  G +  A+ L+ ++     +L +  + CL
Sbjct: 901 GCVTGEVDTALRLYHSMLTRAVKLSLEMWKCL 932



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/271 (30%), Positives = 137/271 (50%), Gaps = 16/271 (5%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  K+   G  P+   Y ++I+   + G    +    + M          C PN VTYT
Sbjct: 659 GLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEK------CFPNVVTYT 712

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
             ++GLCK G +D+A  LF KM   NI+PN VTY   +       +  EA  L  EM+ +
Sbjct: 713 AFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-K 771

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+  N  ++N+++   CK G++ EA+++L  M + G+ P+   Y+T++   C +G V  A
Sbjct: 772 GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAA 831

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP---------DV 235
            EL+ +M   G + +  ++++LI G C N  ++ A  L ++MLS+G+KP         D+
Sbjct: 832 VELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDL 891

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            + N L  G     +V+ A +L+  M    V
Sbjct: 892 GVCNFLMHGGCVTGEVDTALRLYHSMLTRAV 922



 Score =  110 bits (276), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 133/283 (46%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           E FL+   +    + + ++ L+H +       +A  +   M+   + P V + + I+N L
Sbjct: 134 EKFLESHKQCKFSSTLGFDFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGL 193

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            +  K      + +  +  GV+P+ +  + ++   C      RA+E  + MES     ++
Sbjct: 194 LRIRKFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSI 253

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y++LI+G CK   +  AL +   +  KG+K DVV Y TL +G   + Q +    L +E
Sbjct: 254 VTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNE 313

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G      A    +DGL K G I  A +L   L    +  ++  YN LI+ LCK   
Sbjct: 314 MVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGED 373

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L  A  L++++    L  + VTY+I+I + C  G +D A   F
Sbjct: 374 LDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYF 416



 Score = 53.5 bits (127), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 77/212 (36%), Gaps = 52/212 (24%)

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV--------------------- 236
           H   S++IL++   +NK    A SL   +L +G  P  V                     
Sbjct: 94  HTTTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDF 153

Query: 237 ---------------------IYNTLFI----------GLFEIHQVERAFKLFDEMQRHG 265
                                + NTL            GL  I +    +++FDE    G
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAG 213

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V  D +     I  LC+      A E    +   +++L I  YN LI GLCK G +  A 
Sbjct: 214 VKPDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEAL 273

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           E+ +SL    L  DVVTY  ++   C   + D
Sbjct: 274 EVRKSLREKGLKEDVVTYCTLVLGFCRVQQFD 305



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 15/136 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++   G  P+  TY+T+I   CR+G    A+ L++ M     E      P++
Sbjct: 794 IEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVE------PDS 847

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY---------NSLIHGFCYANDW 111
           V +  +I G C  G +DKA EL   M    + P  +           N L+HG C   + 
Sbjct: 848 VAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEV 907

Query: 112 NEAKCLFIEMMDQGVQ 127
           + A  L+  M+ + V+
Sbjct: 908 DTALRLYHSMLTRAVK 923


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 193/367 (52%), Gaps = 10/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--KPN 59
           EA  + +++   G +P   TYN LI+G  R G    A  + +EM        V C  + N
Sbjct: 294 EAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEM--------VACGIEAN 345

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            + + T+++G+CK G ++KA E+  +M ++ + P+  TY+ LI G C   +   A  L  
Sbjct: 346 LIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLD 405

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  + + P V++++VI+N LC+ G +   + +L  M+  G++PNA VY TLM      G
Sbjct: 406 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 465

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           RV  +  +   M   G   +VF Y+ LI G+CK K +E A +   EML + ++P+   Y 
Sbjct: 466 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 525

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
               G  +  ++E A + F+EM   GV  +   Y   I+G CK G + EA  +FR +   
Sbjct: 526 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 585

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +   D++ Y+ LI GL ++G++  A+ +F  L    L+ +  TYN +I   C  G +DKA
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 645

Query: 360 RDLFLDM 366
             L  +M
Sbjct: 646 SQLLEEM 652



 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 191/368 (51%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA    M++      PN  TY   I+G  + G   +A   F EM +     GV+  PN  
Sbjct: 504 EARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS----CGVL--PNVG 557

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +I+G CKEG V +A  +F  +    +  +V TY+ LIHG       +EA  +F E+
Sbjct: 558 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 617

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN  ++N +++  CK G +D+AS+LLE M   G+ P+   YN L+DG C  G +
Sbjct: 618 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 677

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA+ LF  +E  G   N  +Y+ +++GYCK+K    A  L  EML +G+ PD  IYN +
Sbjct: 678 ERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVI 737

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +  + E+A  LF EM   G A+ T ++ T I+G CK+G + EA  L   +   ++
Sbjct: 738 LNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTLIEGYCKSGKLQEANHLLEEMIEKQF 796

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   Y  LID  CK+G +  A  L+  +    ++    TY  ++H     G M +   
Sbjct: 797 IPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSA 856

Query: 362 LFLDMEAK 369
           LF +M AK
Sbjct: 857 LFEEMVAK 864



 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/387 (31%), Positives = 190/387 (49%), Gaps = 46/387 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P V TY+ +INGLCR G+      +  EM  NG        KPN V YTT++    KEG 
Sbjct: 414 PTVLTYSVIINGLCRCGNLQGTNAILREMVMNG-------LKPNAVVYTTLMTAHAKEGR 466

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V++++ +  +M+++ I P+V  YNSLI GFC A    EA+   +EM+++ ++PN  ++  
Sbjct: 467 VEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGA 526

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE--------- 186
            ++   K G+M+ A R    M+  GV PN  +Y  L++G C  G V  A           
Sbjct: 527 FIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRR 586

Query: 187 --------------------------LFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                                     +F  ++  G   N F+Y+ LI+G CK   ++ A 
Sbjct: 587 VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKAS 646

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EM  KGI PD+V YN L  GL +  ++ERA  LFD+++  G+  +   Y   +DG 
Sbjct: 647 QLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGY 706

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIAD 339
           CK+     A +L   + +     D   YN +++  CK  + + A +LF+  L +G   A 
Sbjct: 707 CKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG--FAS 764

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
            V++N +I   C  GK+ +A  L  +M
Sbjct: 765 TVSFNTLIEGYCKSGKLQEANHLLEEM 791



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 191/388 (49%), Gaps = 41/388 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E N+  +NTL+NG+C+ G    AL + +EM     E GV  +P++ TY+ +I+G C+ 
Sbjct: 341 GIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM----EKGV--EPDSQTYSLLIEGHCRG 394

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A EL  +MK   + P V+TY+ +I+G C   +      +  EM+  G++PN V +
Sbjct: 395 QNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVY 454

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M    K G+++E+  +LE M + G+ P+ F YN+L+ GFC   R+  A    + M  
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG--------- 244
              + N  +Y   I+GY K  E+E A   ++EMLS G+ P+V IY  L  G         
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574

Query: 245 ---LFE-----------------IHQVER------AFKLFDEMQRHGVAADTWAYRTFID 278
              +F                  IH + R      AF +F E+Q  G+  + + Y + I 
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G CK G + +A +L   + I     DI  YN LIDGLCK+G ++ A  LF  +    L  
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           + VTY  M+   C       A  L  +M
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEM 722



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 203/403 (50%), Gaps = 54/403 (13%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG-------------EFGVVCKPNTVTY 63
           P+V+TY  +I+  C+ G+   A  +  EM                  + G+V  P+  TY
Sbjct: 222 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLV--PDLYTY 279

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
             +I+G C E    +AK + L+M D  + P  +TYN+LI GF    D  +A  +  EM+ 
Sbjct: 280 DILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVA 339

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G++ N++ +N ++N +CK GKM++A  +++ M++ GV P++  Y+ L++G C    + R
Sbjct: 340 CGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMAR 399

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A EL   M+       V +YS++ING C+   ++G  ++  EM+  G+KP+ V+Y TL  
Sbjct: 400 AFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMT 459

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------NGYIVEAVELFRTL 296
              +  +VE +  + + M+  G+  D + Y + I G CK         Y++E +E  R L
Sbjct: 460 AHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE--RRL 517

Query: 297 RILKY-------------ELDIR-----------------AYNCLIDGLCKSGRLKIAWE 326
           R   +             E++I                   Y  LI+G CK G +  A+ 
Sbjct: 518 RPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFS 577

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +FR +    ++ DV TY+++IH L  +GKM +A  +F +++ K
Sbjct: 578 VFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 620



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 181/355 (50%), Gaps = 13/355 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V TY+ LI+GL R G    A  +F E+     E G++  PN  TY ++I G CK+G VD
Sbjct: 590 DVQTYSVLIHGLSRNGKMHEAFGIFSELQ----EKGLL--PNAFTYNSLISGSCKQGNVD 643

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA +L  +M  + INP++VTYN LI G C A +   AK LF ++  +G+ PN V++  ++
Sbjct: 644 KASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMV 703

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK+     A +LLE M+  GV P+AF+YN +++  C   +  +A +LF  M   G  
Sbjct: 704 DGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA 763

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             V S++ LI GYCK+ +++ A  L  EM+ K   P+ V Y +L     +   +  A +L
Sbjct: 764 STV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           + EMQ   V      Y + + G    G + E   LF  +     E D   Y  +ID  C+
Sbjct: 823 WLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCR 882

Query: 318 SGRLKIAWE-----LFRSLP-RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G +  A +     L + +P +      + T +++       G MD+A ++   M
Sbjct: 883 EGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 937



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 166/354 (46%), Gaps = 48/354 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +L+  G  PN FTYN+LI+G C+ G+   A  L EEM            P+ V
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKG------INPDIV 662

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +IDGLCK G +++AK LF  ++   + PN VTY +++ G+C + +   A  L  EM
Sbjct: 663 TYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEM 722

Query: 122 MDQGVQPN----------------------------------VVSFNVIMNELCKNGKMD 147
           + +GV P+                                   VSFN ++   CK+GK+ 
Sbjct: 723 LLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQ 782

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA+ LLE MI+    PN   Y +L+D  C  G +  A+ L++ M+         +Y+ L+
Sbjct: 783 EANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLL 842

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +GY     +    +L+ EM++KGI+PD + Y  +         V  A KL DE+   G+ 
Sbjct: 843 HGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMP 902

Query: 268 ADTWAYR-------TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +  +R           G    G + EA E+ R++    +  +  +   L+DG
Sbjct: 903 MKS-GFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDG 955



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 166/320 (51%), Gaps = 17/320 (5%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN+V +  ++D   K GF+ +A  +FL  K+    P++++ NSL+      N       +
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR-LLEL----------------MIQIG 160
           F  M    V P+V ++  +++  CK G + +A R LLE+                M+  G
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKG 271

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + P+ + Y+ L++GFC+  R   A+ + + M  +G K    +Y+ LI+G+ +  +IE A 
Sbjct: 272 LVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAF 331

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  EM++ GI+ +++I+NTL  G+ +  ++E+A ++  EM   GV  D+  Y   I+G 
Sbjct: 332 RIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGH 391

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           C+   +  A EL   ++  K    +  Y+ +I+GLC+ G L+    + R +    L  + 
Sbjct: 392 CRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNA 451

Query: 341 VTYNIMIHALCADGKMDKAR 360
           V Y  ++ A   +G+++++R
Sbjct: 452 VVYTTLMTAHAKEGRVEESR 471


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/396 (31%), Positives = 200/396 (50%), Gaps = 32/396 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN-----GEFGVV- 55
           EA  LF +L+  GC PNV  Y  +I+GL + G     L  FEEM+  +       + VV 
Sbjct: 126 EACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVI 185

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C P+T+TYTT+IDG  K   +D+A++L   M  +   
Sbjct: 186 DGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE 245

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P  VTY S++HGFC  +  NEAK +  +M ++G +P +  F  +++     G+ +EA ++
Sbjct: 246 PTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQV 305

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M   G  P+  +Y +L+D    TGRV  A  +F SM   GC  +  +Y  +I  + K
Sbjct: 306 LTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSK 365

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  +   M   G+ PD   YN+L  G  ++ +V++AF ++D M   G+  +   
Sbjct: 366 IGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVT 425

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELD--IRAYNCLIDGLCKSGRLKIAWELFRS 330
           +   + GL K+G    A  LF+ + + K E+   + +Y  LIDGL K+GR+  A+  F+ 
Sbjct: 426 FNVLMHGLFKDGKTDRAFSLFKEM-LEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQE 484

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +I +  TY  +I++L   G++ +A+ L  DM
Sbjct: 485 MIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDM 520



 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 179/352 (50%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V +Y T+I GL  +     A  LFEE+          C PN V YT +IDGL K G ++
Sbjct: 107 DVISYTTVIKGLADSKRIDEACELFEELKTAG------CSPNVVAYTAVIDGLLKAGRIE 160

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
              + F +M   +  P   TY  +I G C A    +A  +F +M+ +G  P+ +++  ++
Sbjct: 161 DGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLI 220

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +   K  KMDEA +LL++M+  G  P A  Y +++ GFC    +N A+E+   M   GC+
Sbjct: 221 DGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCE 280

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             +F ++ L++ Y      E A  + +EM ++G  PDV++Y +L   LF   +V  A  +
Sbjct: 281 PGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHV 340

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           FD M   G A D   Y T I    K G +  A E+   +       D  AYN L+DG  K
Sbjct: 341 FDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVK 400

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             R+  A+ ++  +    +  + VT+N+++H L  DGK D+A  LF +M  K
Sbjct: 401 LERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 452



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 191/403 (47%), Gaps = 49/403 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   GC P+  TY TLI+G  +      A  L + M     E      P  V
Sbjct: 196 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE------PTAV 249

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINP---------------------------- 93
           TY +I+ G CK   +++AKE+  +M++    P                            
Sbjct: 250 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 309

Query: 94  -------NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                  +V+ Y SLI          EA+ +F  M+++G  P+ +++  I+    K G +
Sbjct: 310 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 369

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           + A  +LELM + GV P+ F YN+LMDG+    RV++A  ++  M + G K N  ++++L
Sbjct: 370 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 429

Query: 207 INGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++G  K+ + + A SL+ EML K  + P +V Y  L  GL +  +V  AF  F EM   G
Sbjct: 430 MHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRG 489

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +   Y + I  L K G I EA +L   +  L    D++AY+ LI GL  S  +  AW
Sbjct: 490 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 549

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           ++F+ + +     + VTY ++     A G+        LD+EA
Sbjct: 550 DVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA-------LDLEA 585



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 166/353 (47%), Gaps = 10/353 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GCEP + +YNT+I+GL        A   F  M + NG     C+P+ + +TT+I G CK 
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID-NG-----CEPDVIAFTTLIHGFCKA 55

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G      +L L    +   P+V  Y S+IHG+C A D +     +   +      +V+S+
Sbjct: 56  GQPQVGHKL-LNQALKRFRPDVFLYTSVIHGYCKAGDLDTG---YFRAVTPKASLDVISY 111

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++  L  + ++DEA  L E +   G  PN   Y  ++DG    GR+    + F  M  
Sbjct: 112 TTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSG 171

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C     +Y+++I+G CK + +  A  ++ +M+ KG  PD + Y TL  G  +  +++ 
Sbjct: 172 SSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDE 231

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KL D M   G       Y + + G CK   I EA E+   +R    E  +  +  L+ 
Sbjct: 232 ARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 291

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                GR + A+++   +       DV+ Y  +I  L + G++ +AR +F  M
Sbjct: 292 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 344



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 31/236 (13%)

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
           +G  P    YNT++ G     +++ A + F SM   GC+ +V +++ LI+G+CK  + + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 219 ALSLYSEMLS---------------------------KGIKP----DVVIYNTLFIGLFE 247
              L ++ L                            + + P    DV+ Y T+  GL +
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             +++ A +LF+E++  G + +  AY   IDGL K G I + ++ F  +           
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           Y  +IDGLCK+  L  A ++F  + +   + D +TY  +I       KMD+AR L 
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLL 236



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 89/207 (42%), Gaps = 31/207 (14%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           MGC+  + SY+ +I+G     +++ A   ++ M+  G +PDV+ + TL  G  +  Q + 
Sbjct: 1   MGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQV 60

Query: 254 AFKLFDEMQR-------------HG------------------VAADTWAYRTFIDGLCK 282
             KL ++  +             HG                   + D  +Y T I GL  
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLAD 120

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +  I EA ELF  L+      ++ AY  +IDGL K+GR++   + F  +     +    T
Sbjct: 121 SKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTT 180

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           Y ++I  LC    +  A  +F  M  K
Sbjct: 181 YTVVIDGLCKAQMLPDACKVFEQMVQK 207


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 196/361 (54%), Gaps = 8/361 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G  PN+ TYN +++GLC+ G    A +++E M   N +      P+ +TY T+I G
Sbjct: 256 VRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQ------PDMITYGTMIHG 309

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC+   VD A  ++ +M    + P+VV YNSL+ GFC+A    EA   +  M   G++ N
Sbjct: 310 LCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-N 368

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           V S+N+++  L   G +D+A+ L EL+ +   + P+   ++T++ G C  G  N++ ++ 
Sbjct: 369 VTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQIL 428

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
               + G + + FSYS +I+G CK+  ++ A+ LY ++     KP+  IYN L  G  + 
Sbjct: 429 EEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQA 488

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +   A +++ +M  +  +  T  Y T I GLCK    +EA    R +      LD+  Y
Sbjct: 489 SKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTY 548

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             LI GLC+  ++  A  L+  +    L  DVV +NI+IH LC+ GK+D+A  L  +M+ 
Sbjct: 549 GSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKE 608

Query: 369 K 369
           K
Sbjct: 609 K 609



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 193/401 (48%), Gaps = 39/401 (9%)

Query: 3   AAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           A A F +L  F GC P V ++N L++   R      A   F  +++G   FG    PN  
Sbjct: 103 ALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHG--AFGRRIAPNLQ 160

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++  LC  G +D+A  LF  ++   + P+ +TY++L+ GF   N  + A  L  EM
Sbjct: 161 TYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEM 220

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGR 180
               VQP+ V +N ++    +NG+ ++A R+ E +++  G  PN   YN ++DG C  G 
Sbjct: 221 PSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGM 280

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +++  M +   + ++ +Y  +I+G C++ +++ A  +YSEM+  G+ PDVVIYN+
Sbjct: 281 FKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNS 340

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV---------------------AADTW-------- 271
           L  G     +V  A+K +D M   G+                     A D W        
Sbjct: 341 LLKGFCHAGRVGEAWKFWDSMSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDS 400

Query: 272 ------AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
                  + T I GLC+ G+  +++++    R    ELD  +Y+ +I GLCK GRL  A 
Sbjct: 401 LSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAV 460

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +L+  +       +   YN +I+  C   K   A  ++  M
Sbjct: 461 KLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQM 501



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 190/370 (51%), Gaps = 9/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AA ++ ++   G  P+V  YN+L+ G C  G    A   ++ M+       V    N  
Sbjct: 318 SAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMS-------VSGIRNVT 370

Query: 62  TYTTIIDGLCKEGFVDKAKELF-LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +Y  ++ GL   G VDKA +L+ L  KD++++P++VT++++IHG C     N++  +  E
Sbjct: 371 SYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEE 430

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               G + +  S++ +++ LCK+G++D+A +L E +     +PN+ +YN L++GFC   +
Sbjct: 431 ARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASK 490

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A  ++  M    C     +Y+ LI+G CK ++   A     EML KG   DV  Y +
Sbjct: 491 FSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGS 550

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL    +++ A  L++++   G+  D   +   I GLC  G + EA +L   ++   
Sbjct: 551 LIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKN 610

Query: 301 YEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++  YN L+DG  ++G    A  L+ ++    L+ D+++YN  I  LC+  +  + 
Sbjct: 611 NCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEG 670

Query: 360 RDLFLDMEAK 369
             L  +M A 
Sbjct: 671 VQLLNEMLAS 680



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/277 (28%), Positives = 148/277 (53%), Gaps = 7/277 (2%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R  G E + F+Y+++I+GLC+ G    A+ L+E+++  +       KPN+  Y  +I+G 
Sbjct: 432 RTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS------FKPNSHIYNALINGF 485

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+      A  ++ +M + + +P  +TYN+LIHG C A  + EA     EM+++G   +V
Sbjct: 486 CQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDV 545

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            ++  ++  LC++ K+D A  L   ++  G++ +  ++N L+ G C  G+V+ A +L   
Sbjct: 546 NTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSE 605

Query: 191 M-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           M E   C  NV +Y+ L++G+ +    + A SL+  +L  G+ PD++ YNT   GL   +
Sbjct: 606 MKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCN 665

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           +     +L +EM   G+      +   +  + K G I
Sbjct: 666 RTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPI 702



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 136/252 (53%), Gaps = 7/252 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ K+ +   +PN   YN LING C+      A+ ++ +MA  +      C P T+
Sbjct: 458 DAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND------CSPTTI 511

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GLCK     +A     +M ++    +V TY SLI G C     + A  L+ ++
Sbjct: 512 TYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQI 571

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +D+G+Q +VV  N++++ LC  GK+DEAS+LL E+  +    PN   YNTLMDGF  TG 
Sbjct: 572 LDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGC 631

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            ++A  L++++   G   ++ SY+  I G C        + L +EML+ GI P  + +N 
Sbjct: 632 FDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNI 691

Query: 241 LFIGLFEIHQVE 252
           L   + +   ++
Sbjct: 692 LVRAVIKYGPIQ 703



 Score = 97.8 bits (242), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 97/173 (56%), Gaps = 7/173 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA+    ++   GC  +V TY +LI GLCR      AL L+ ++ +         + + 
Sbjct: 527 LEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKG------LQTDV 580

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           V +  +I GLC  G VD+A +L  +MK++ N  PNVVTYN+L+ GF     +++A  L++
Sbjct: 581 VMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWM 640

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
            +++ G+ P+++S+N  +  LC   +  E  +LL  M+  G+ P A  +N L+
Sbjct: 641 AILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILV 693


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 190/354 (53%), Gaps = 9/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+++T+NT+I+GLCR G    A ++ +++      +G+   P+  TY ++IDG CK+G 
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIK----AWGLA--PSVATYNSLIDGYCKKGG 241

Query: 76  VD---KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
                    L  +M +  I+P  VT+  LI+G+C  ++   A  +F EM  QG+  +VV+
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++ LC  GK++E  +L+E M  +G+ PN   +  ++ GFC  G +  A +    M 
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               + +V  Y+ILI+ Y +  ++E A+++   M  KGI P+V  YN L  G        
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWR 421

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L DEM+  G+ AD   Y   I  LC  G + +AV+L   +  +  E +   YN +I
Sbjct: 422 SASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G C  G +K A+E+   + +    A+VVTYN+ I   C  GKMD+A DL  +M
Sbjct: 482 QGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN---LFEEMANGNGEFGVVCKP 58
           +A  +   ++ +G  P+V TYN+LI+G C+ G      +   L +EM     E G+   P
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SP 262

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
             VT+  +I+G CK      A  +F +MK + I  +VVTYNSLI G C      E   L 
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM D G+ PN ++F  ++   CK G M +A+  ++ M +  V P+  +YN L+D +   
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++  A  +  +M   G   NV +Y+ LI G+ ++ +   A  L  EM  KGI+ DVV Y
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L   L    +V +A KL DEM   G+  +   Y T I G C  G I  A E+   +  
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +   ++  YN  I   C+ G++  A +L   +    L+ + +TY  +   +   G
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 38/313 (12%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  + N+L+ G   A   + A+  F   + + V P++ +FN +++ LC+ G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAEELFVSMESMGCKHNVFSYSILING 209
            + +   G+ P+   YN+L+DG+C  G        + L   M   G      ++ +LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YCKN     A+ ++ EM  +GI   VV YN+L  GL    +VE   KL +EM+  G++ +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 270 TWAYRTFIDGLCKNGYIVEA----------------------VELFRTLRILKYELDIR- 306
              +   + G CK G + +A                      ++++R L  ++  + ++ 
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 307 ------------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
                        YNCLI G  +SG  + A  L   +    + ADVVTYN++I ALC  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 355 KMDKARDLFLDME 367
           ++ KA  L  +M 
Sbjct: 454 EVRKAVKLLDEMS 466



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 9/239 (3%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           +P+  S N ++  L    ++D A +     ++  V P+ + +NT++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPDVVIYNT 240
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI P  V +  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +      A ++F+EM++ G+AA    Y + I GLC  G + E V+L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +   + C++ G CK G +  A +    +    +  DVV YNI+I      GKM+ A
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 38/174 (21%)

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P     N L  GL    +V+ A K F    R  V+ D + + T I GLC+ G + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSG-------------------------------- 319
           + + ++       +  YN LIDG CK G                                
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 320 ------RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                     A  +F  + +  + A VVTYN +I  LC++GK+++   L  +ME
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 22/129 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G EPN  TYNT+I G C  G+   A  +   M           + N V
Sbjct: 457 KAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK------RANVV 510

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY   I   C+ G +D+A +L  +M D+ + PN +TY ++  G                M
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------M 554

Query: 122 MDQGVQPNV 130
           M++G  P++
Sbjct: 555 MEKGYTPDI 563


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/354 (35%), Positives = 186/354 (52%), Gaps = 6/354 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +++  GC PNV TY  LI+GL R G   VA+ L+ +M       G+V  PNTVTY  
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNA 420

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+ LC  G    A ++F  M+      N  TYN +I G C   D  +A  LF +M+  G
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 480

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P VV++N ++N     G ++ A+RLL+LM + G  P+ + YN L+ GF   G++  A 
Sbjct: 481 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 540

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F  M   G   N  SY+ LI+G+ K+ +++ ALSL   M   G  P+V  YN +  GL
Sbjct: 541 FYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGL 600

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            + ++   A K+ D+M   G+  +   Y T IDGLC+NG    A ++F  +   K   ++
Sbjct: 601 SKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 660

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             Y+ LI GLC+ G+   A  L + + R  L  D VT+  +I      G++D A
Sbjct: 661 YTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 714



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/367 (34%), Positives = 185/367 (50%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   GC+PN  TY+TLINGLC  G    AL++ EEM     E G+  +P   T
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI----EKGI--EPTVYT 347

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT  I  LC     ++A EL  +MK     PNV TY +LI G         A  L+ +M+
Sbjct: 348 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 407

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN V++N ++NELC  G+   A ++   M   G   N   YN ++ G CL G + 
Sbjct: 408 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 467

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  LF  M  MG    V +Y+ LINGY     +  A  L   M   G +PD   YN L 
Sbjct: 468 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 527

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  ++E A   F EM   G+  +  +Y T IDG  K+G +  A+ L   +  +   
Sbjct: 528 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN 587

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++ +YN +I+GL K  R   A ++   +    L+ +V+TY  +I  LC +G+   A  +
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647

Query: 363 FLDMEAK 369
           F DME +
Sbjct: 648 FHDMEKR 654



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 177/348 (50%), Gaps = 6/348 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ K+   G  PN  TYN LIN LC  G    AL +F  M  G+G        NT T
Sbjct: 399 AIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWM-EGHGSLA-----NTQT 452

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  II GLC  G ++KA  LF KM      P VVTYN+LI+G+    + N A  L   M 
Sbjct: 453 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 512

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G +P+  ++N +++   K GK++ AS   + M++ G+ PN   Y TL+DG    G+V+
Sbjct: 513 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVD 572

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   ME MGC  NV SY+ +ING  K      A  +  +M  +G+ P+V+ Y TL 
Sbjct: 573 IALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLI 632

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL    + + AFK+F +M++     + + Y + I GLC+ G   EA  L + +      
Sbjct: 633 DGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLA 692

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            D   +  LIDG    GR+  A+ L R +       +  TY++++  L
Sbjct: 693 PDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGL 740



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 208/426 (48%), Gaps = 65/426 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L   ++  GCEP+ +TYN L++G  + G    A   F+EM     E G+   PN V+
Sbjct: 504 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV----ECGL--NPNPVS 557

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT+IDG  K+G VD A  L  +M++   NPNV +YN++I+G    N ++EA+ +  +M 
Sbjct: 558 YTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMA 617

Query: 123 DQGVQPNVVSFNVIMNELCKNG-----------------------------------KMD 147
           +QG+ PNV+++  +++ LC+NG                                   K D
Sbjct: 618 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 677

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA  LL+ M + G+ P+   + +L+DGF + GR++ A  L   M  +GCK N  +YS+L+
Sbjct: 678 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLL 737

Query: 208 NG------------------------YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
            G                        + K+   E   +L + M   G +P +  Y+TL  
Sbjct: 738 KGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVS 797

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GL    +   A +L  +M+  G   D   Y + +   CKN  +  A+++F ++    ++L
Sbjct: 798 GLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQL 857

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +  Y  LI  LCK+G+++ A  LF ++      AD + + +++  L  +G++D    L 
Sbjct: 858 HLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL 917

Query: 364 LDMEAK 369
             ME+K
Sbjct: 918 HIMESK 923



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 121/392 (30%), Positives = 183/392 (46%), Gaps = 30/392 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G  P V TYNTLING    G+   A  L + M   NG     C+P+  
Sbjct: 468 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE-NG-----CEPDEW 521

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G  K G ++ A   F +M +  +NPN V+Y +LI G       + A  L   M
Sbjct: 522 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERM 581

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PNV S+N ++N L K  +  EA ++ + M + G+ PN   Y TL+DG C  GR 
Sbjct: 582 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRT 641

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  ME   C  N+++YS LI G C+  + + A  L  EM  KG+ PD V + +L
Sbjct: 642 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSL 701

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE---AVELFRTLRI 298
             G   + +++ AF L   M   G   +   Y   + GL K   ++E   AV+       
Sbjct: 702 IDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSF 761

Query: 299 LKYELDIR---------------------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             +E D+                       Y+ L+ GLC+ GR   A +L + +      
Sbjct: 762 SPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFC 821

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            D   Y  ++ A C + ++D A  +F  +EAK
Sbjct: 822 PDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 853



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 181/349 (51%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           ++++ NTL+  L +      A NL+++M N         +P+ +T+ T+I+ L K+G V 
Sbjct: 204 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG------IQPSLLTFNTLINILSKKGKVR 257

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+ +  ++   +++P+V TY SLI G C   + + A  +F  M+ +G  PN V+++ ++
Sbjct: 258 EAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLI 317

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LC  G++DEA  +LE MI+ G+ P  + Y   +   C       A EL   M+  GC+
Sbjct: 318 NGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCR 377

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LI+G  +  ++E A+ LY +ML +G+ P+ V YN L   L    +   A K+
Sbjct: 378 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 437

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M+ HG  A+T  Y   I GLC  G I +A+ LF  +  +     +  YN LI+G   
Sbjct: 438 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 497

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G +  A  L   +       D  TYN ++      GK++ A   F +M
Sbjct: 498 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 165/344 (47%), Gaps = 32/344 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G  PNV TY TLI+GLCR G T  A  +F +M          C PN  
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK------CLPNLY 661

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I GLC+EG  D+A+ L  +M+ + + P+ VT+ SLI GF      + A  L   M
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDE------------------------ASRLLELMI 157
           +D G +PN  +++V++  L K   + E                         S LL  M 
Sbjct: 722 VDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMS 781

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEI 216
           +IG  P    Y+TL+ G C  GR   AE+L   M+  G C      YS+LI  +CKN E+
Sbjct: 782 EIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLI-AHCKNLEV 840

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + AL ++  + +KG +  + IY  L   L +  QVE A  LFD M      AD   +   
Sbjct: 841 DHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVL 900

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           +DGL K G +   ++L   +    +  +I+ Y  L   L + G+
Sbjct: 901 VDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGK 944



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 130/249 (52%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+   G   ++ S N ++ +L K   ++ A  L + M+  G++P+   +NTL++     G
Sbjct: 195 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 254

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V  AE +   +       +VF+Y+ LI G+C+N+ ++ A  ++  M+ +G  P+ V Y+
Sbjct: 255 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 314

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL    +V+ A  + +EM   G+    + Y   I  LC   +  EA+EL   ++  
Sbjct: 315 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 374

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +++ Y  LI GL + G+L++A  L+  + +  L+ + VTYN +I+ LC  G+   A
Sbjct: 375 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 434

Query: 360 RDLFLDMEA 368
             +F  ME 
Sbjct: 435 LKIFHWMEG 443



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 124/285 (43%), Gaps = 30/285 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+  T+ +LI+G    G    A  L   M +      V CKPN  
Sbjct: 678 EAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVD------VGCKPNYR 731

Query: 62  TYTTIIDGLCKE----------------GFVDKAKE--------LFLKMKDENINPNVVT 97
           TY+ ++ GL KE                 F    K+        L  +M +    P + T
Sbjct: 732 TYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDT 791

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y++L+ G C    + EA+ L  +M ++G  P+   +  ++   CKN ++D A ++   + 
Sbjct: 792 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 851

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G + +  +Y  L+   C  G+V  A+ LF +M       +   +++L++G  K  E++
Sbjct: 852 AKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELD 911

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
             + L   M SK   P++  Y  L   L  I +   +  L D+++
Sbjct: 912 LCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKLK 956


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/354 (33%), Positives = 190/354 (53%), Gaps = 9/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+++T+NT+I+GLCR G    A ++ +++      +G+   P+  TY ++IDG CK+G 
Sbjct: 188 SPDIYTFNTVISGLCRIGQLRKAGDVAKDIK----AWGLA--PSVATYNSLIDGYCKKGG 241

Query: 76  VD---KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
                    L  +M +  I+P  VT+  LI+G+C  ++   A  +F EM  QG+  +VV+
Sbjct: 242 AGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVT 301

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++ LC  GK++E  +L+E M  +G+ PN   +  ++ GFC  G +  A +    M 
Sbjct: 302 YNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMT 361

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               + +V  Y+ILI+ Y +  ++E A+++   M  KGI P+V  YN L  G        
Sbjct: 362 ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWR 421

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L DEM+  G+ AD   Y   I  LC  G + +AV+L   +  +  E +   YN +I
Sbjct: 422 SASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTII 481

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G C  G +K A+E+   + +    A+VVTYN+ I   C  GKMD+A DL  +M
Sbjct: 482 QGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEM 535



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 175/356 (49%), Gaps = 9/356 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN---LFEEMANGNGEFGVVCKP 58
           +A  +   ++ +G  P+V TYN+LI+G C+ G      +   L +EM     E G+   P
Sbjct: 209 KAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV----EAGI--SP 262

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
             VT+  +I+G CK      A  +F +MK + I  +VVTYNSLI G C      E   L 
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLM 322

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM D G+ PN ++F  ++   CK G M +A+  ++ M +  V P+  +YN L+D +   
Sbjct: 323 EEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRL 382

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++  A  +  +M   G   NV +Y+ LI G+ ++ +   A  L  EM  KGI+ DVV Y
Sbjct: 383 GKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTY 442

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L   L    +V +A KL DEM   G+  +   Y T I G C  G I  A E+   +  
Sbjct: 443 NVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEK 502

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +   ++  YN  I   C+ G++  A +L   +    L+ + +TY  +   +   G
Sbjct: 503 CRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 38/313 (12%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  + N+L+ G   A   + A+  F   + + V P++ +FN +++ LC+ G++ +A  +
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAEELFVSMESMGCKHNVFSYSILING 209
            + +   G+ P+   YN+L+DG+C  G        + L   M   G      ++ +LING
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YCKN     A+ ++ EM  +GI   VV YN+L  GL    +VE   KL +EM+  G++ +
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 270 TWAYRTFIDGLCKNGYIVEA----------------------VELFRTLRILKYELDIR- 306
              +   + G CK G + +A                      ++++R L  ++  + ++ 
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 307 ------------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
                        YNCLI G  +SG  + A  L   +    + ADVVTYN++I ALC  G
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 355 KMDKARDLFLDME 367
           ++ KA  L  +M 
Sbjct: 454 EVRKAVKLLDEMS 466



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 119/239 (49%), Gaps = 9/239 (3%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           +P+  S N ++  L    ++D A +     ++  V P+ + +NT++ G C  G++ +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY------SEMLSKGIKPDVVIYNT 240
           +   +++ G   +V +Y+ LI+GYCK     GA ++Y       EM+  GI P  V +  
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKG---GAGNMYHVDMLLKEMVEAGISPTAVTFGV 269

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +      A ++F+EM++ G+AA    Y + I GLC  G + E V+L   +  L 
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +   + C++ G CK G +  A +    +    +  DVV YNI+I      GKM+ A
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDA 388



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 38/174 (21%)

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           +P     N L  GL    +V+ A K F    R  V+ D + + T I GLC+ G + +A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSG-------------------------------- 319
           + + ++       +  YN LIDG CK G                                
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272

Query: 320 ------RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                     A  +F  + +  + A VVTYN +I  LC++GK+++   L  +ME
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEME 326



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 22/129 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G EPN  TYNT+I G C  G+   A  +   M           + N V
Sbjct: 457 KAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRK------RANVV 510

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY   I   C+ G +D+A +L  +M D+ + PN +TY ++  G                M
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEG----------------M 554

Query: 122 MDQGVQPNV 130
           M++G  P++
Sbjct: 555 MEKGYTPDI 563


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/359 (34%), Positives = 181/359 (50%), Gaps = 7/359 (1%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M+ R  GC PN  TYN +I GL R G    A  L E M           K ++ TY  +I
Sbjct: 230 METRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-------KASSFTYNPLI 282

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GL   G V K  +L L+M++E I P VVTYN++IHG   +     A+  F EM   G+ 
Sbjct: 283 TGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLL 342

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+V+++N ++N  CK G + EA  L   + + G+ P    YN  +DG+C  G +  A  L
Sbjct: 343 PDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARIL 402

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M   GC  NV +Y+IL+ G      +  A   + EMLSKG++PD   YNT       
Sbjct: 403 KEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELI 462

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           +  + RA +L + +   G+++DT  Y   I GLCK G + +A EL   +     + D   
Sbjct: 463 LGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCIT 522

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y CLI   C+ G L+ A ++F ++    L+   VT+ ++IHA C  G +  A   F  M
Sbjct: 523 YTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKM 581



 Score =  174 bits (440), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 173/354 (48%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P V TYN +I+GL ++G    A   F EM       G++  P+ +TY ++++G CK 
Sbjct: 305 GIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMR----AMGLL--PDVITYNSLLNGYCKA 358

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A  LF  ++   + P V+TYN  I G+C   D  EA+ L  EM +QG  PNV ++
Sbjct: 359 GNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 418

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++M        +  A    + M+  G++P+ F YNT +    + G + RA EL   +  
Sbjct: 419 TILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLML 478

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ILI+G CK   ++ A  L  +M+S G++PD + Y  L     E   +  
Sbjct: 479 EGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 538

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K+F+ M   G+      +   I   C+ G +  A   FR +     E +   YN LI 
Sbjct: 539 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 598

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            LC+ GR ++A   F  +    L+A+  TY ++I   C  G  + A   + +M 
Sbjct: 599 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 652



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 121/396 (30%), Positives = 181/396 (45%), Gaps = 42/396 (10%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F ++   G  P+V   N ++  L           + EEM     + G+  +P+ VTY T+
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEML----QLGI--EPSIVTYNTL 210

Query: 67  IDGLCKEGFVDKAKELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLF------ 118
           +D   KEG  DK   L  +M+       PN VTYN +I G     D  EA  L       
Sbjct: 211 LDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLS 270

Query: 119 ----------------------------IEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                                       +EM ++G+ P VV++N +++ L ++G ++ A 
Sbjct: 271 KKASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQ 330

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
                M  +G+ P+   YN+L++G+C  G +  A  LF  +   G    V +Y+I I+GY
Sbjct: 331 VKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGY 390

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  ++E A  L  EM  +G  P+V  Y  L  G   +  +  A + FDEM   G+  D 
Sbjct: 391 CRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDC 450

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           +AY T I      G I  A+EL   L +     D   YN LI GLCK+G LK A EL   
Sbjct: 451 FAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMK 510

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    L  D +TY  +IHA C  G + +AR +F +M
Sbjct: 511 MVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 546



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 153/313 (48%), Gaps = 6/313 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  LR  G  P V TYN  I+G CR G    A  L EEM    GE G  C PN  
Sbjct: 363 EALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEM----GEQG--CLPNVC 416

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++ G      +  A+E F +M  + + P+   YN+ I       D   A  L   +
Sbjct: 417 TYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVL 476

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+  + V++N++++ LCK G + +A  L   M+  G++P+   Y  L+   C  G +
Sbjct: 477 MLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLL 536

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F +M S G   +  +++++I+ YC+   +  A   + +ML +G++P+ + YN L
Sbjct: 537 REARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 596

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L  + + + A   F EM   G+ A+ + Y   IDG CK G   +A+  +  +     
Sbjct: 597 IHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 656

Query: 302 ELDIRAYNCLIDG 314
             D   +  L+ G
Sbjct: 657 HPDYLTHKALVKG 669



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 167/348 (47%), Gaps = 7/348 (2%)

Query: 1   MEAAAL-FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +EAA + F ++R  G  P+V TYN+L+NG C+ G+   AL LF ++            P 
Sbjct: 326 VEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAG------LAPT 379

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TY   IDG C+ G +++A+ L  +M ++   PNV TY  L+ G         A+  F 
Sbjct: 380 VLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFD 439

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +G+QP+  ++N  +      G +  A  L E+++  G+  +   YN L+ G C TG
Sbjct: 440 EMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTG 499

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A+EL + M S G + +  +Y+ LI+ +C+   +  A  +++ M+S G+ P  V + 
Sbjct: 500 NLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFT 559

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +         +  A+  F +M   GV  +   Y   I  LC+ G    A   F  +   
Sbjct: 560 VIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLER 619

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
               +   Y  LIDG CK G  + A   +  + +  +  D +T+  ++
Sbjct: 620 GLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALV 667



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 140/289 (48%), Gaps = 3/289 (1%)

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           F +M    + P+V   N ++     A  W++   +  EM+  G++P++V++N +++   K
Sbjct: 157 FREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLK 216

Query: 143 NGKMDEASRLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            G+ D+ + LL+ M     G  PN   YN ++ G    G +  A EL   M  +  K + 
Sbjct: 217 EGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMR-LSKKASS 275

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           F+Y+ LI G      ++    L  EM ++GI P VV YN +  GL +   VE A   F E
Sbjct: 276 FTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAE 335

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G+  D   Y + ++G CK G + EA+ LF  LR       +  YN  IDG C+ G 
Sbjct: 336 MRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGD 395

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+ A  L   +     + +V TY I++        +  AR+ F +M +K
Sbjct: 396 LEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK 444



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 107/197 (54%), Gaps = 6/197 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +  TYN LI+GLC+TG+   A  L  +M + NG      +P+ +TYT +I   C+ 
Sbjct: 480 GISSDTVTYNILIHGLCKTGNLKDAKELQMKMVS-NG-----LQPDCITYTCLIHAHCER 533

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A+++F  M  + + P+ VT+  +IH +C   +   A   F +M+++GV+PN +++
Sbjct: 534 GLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITY 593

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           NV+++ LC+ G+   AS     M++ G+  N + Y  L+DG C  G    A   +  M  
Sbjct: 594 NVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQ 653

Query: 194 MGCKHNVFSYSILINGY 210
            G   +  ++  L+ G+
Sbjct: 654 NGIHPDYLTHKALVKGF 670



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 74/186 (39%), Gaps = 38/186 (20%)

Query: 220 LSLYSEMLSKGIKPDV-----------------------------------VIYNTLFIG 244
           LS + EM S G+ PDV                                   V YNTL   
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 245 LFEIHQVERAFKLFDEMQRHGVA--ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             +  + ++   L  EM+  G     +   Y   I GL + G + EA EL   +R+ K  
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKA 273

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                YN LI GL   G +K  ++L   +    ++  VVTYN MIH L   G ++ A+  
Sbjct: 274 SSF-TYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVK 332

Query: 363 FLDMEA 368
           F +M A
Sbjct: 333 FAEMRA 338


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 187/368 (50%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNT 60
           EA  L  +++  G E ++  Y +LI G C  G       LF+E +  G+        P  
Sbjct: 230 EAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCA 282

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+I G CK G + +A E+F  M +  + PNV TY  LI G C      EA  L   
Sbjct: 283 ITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +  +PNVV++N+I+N+LCK+  + +A  ++ELM +   RP+   YN+L+ G C  G 
Sbjct: 343 MLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGD 402

Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           ++ A +L   M  +S     +V S++ LI+G CK   +  AL +Y  ++ K    D+V  
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTT 462

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L     +   V +A +L+ ++    +  ++  Y T IDG CK G +  A  L   +R+
Sbjct: 463 NILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRL 522

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +    +  YNCL+  LCK G L  AW LF  + R     DV+++NIMI      G +  
Sbjct: 523 SELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKS 582

Query: 359 ARDLFLDM 366
           A  L + M
Sbjct: 583 AESLLVGM 590



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 189/367 (51%), Gaps = 8/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  ++R     P+V +YNT+I G C       AL L  EM  G+G     C  + V
Sbjct: 160 KAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEM-QGSG-----CSWSLV 213

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID  CK G +D+A  L  +MK + +  +++ Y SLI GFC   + +  K LF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P  +++N ++   CK G++ EAS + E M++ GVRPN + Y  L+DG C  G+ 
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M     + NV +Y+I+IN  CK+  +  AL +   M  +  +PD + YN+L
Sbjct: 334 KEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
             GL     ++ A KL   M +       D  ++   I GLCK   + +A++++  L   
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEK 453

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               DI   N L++   KSG +  A EL++ +    ++ +  TY  MI   C  G ++ A
Sbjct: 454 LGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVA 513

Query: 360 RDLFLDM 366
           + L   M
Sbjct: 514 KGLLCKM 520



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 163/307 (53%), Gaps = 2/307 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y  ++ GLC+     KA  L  +M+  ++ P+VV+YN++I GFC   +  +A  L 
Sbjct: 141 NVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLA 200

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G   ++V++ ++++  CK GKMDEA  LL+ M   G+  +  VY +L+ GFC  
Sbjct: 201 NEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDC 260

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++R + LF  +   G      +Y+ LI G+CK   ++ A  ++  M+ +G++P+V  Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTY 320

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L  GL  + + + A +L + M +     +   Y   I+ LCK+  + +A+E+   ++ 
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKK 380

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKM 356
            +   D   YN L+ GLC  G L  A +L   + +       DV+++N +IH LC   ++
Sbjct: 381 RRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRL 440

Query: 357 DKARDLF 363
            +A D++
Sbjct: 441 HQALDIY 447



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 193/394 (48%), Gaps = 32/394 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA+ +F  +   G  PNV+TY  LI+GLC  G T  AL L   M   + E  VV      
Sbjct: 300 EASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIII 359

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKA-KELFLKMKDEN- 90
              CK                    P+ +TY +++ GLC +G +D+A K L+L +KD + 
Sbjct: 360 NKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSY 419

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
            +P+V+++N+LIHG C  N  ++A  ++  ++++    ++V+ N+++N   K+G +++A 
Sbjct: 420 TDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAM 479

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L + +    + PN+  Y T++DGFC TG +N A+ L   M       +VF Y+ L++  
Sbjct: 480 ELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSL 539

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   ++ A  L+ EM      PDV+ +N +  G  +   ++ A  L   M   G++ D 
Sbjct: 540 CKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDL 599

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + Y   I+   K GY+ EA+  F  +    +E D    + ++      G      E  + 
Sbjct: 600 FTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSVLKYCISQGETDKLTEFVKK 659

Query: 331 L-PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L  + V++   +T  +M +   + G MD A+ L 
Sbjct: 660 LVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLL 693



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 145/275 (52%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A   + KM + +   N V+ + L+  F        A  +   M+ +G   NV ++N+++ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLK 150

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LC+N +  +A  LL  M Q  + P+   YNT++ GFC    + +A +L   M+  GC  
Sbjct: 151 GLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSW 210

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++ ++ ILI+ +CK  +++ A+ L  EM  KG++ D+++Y +L  G  +  +++R   LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DE+   G +     Y T I G CK G + EA E+F  +       ++  Y  LIDGLC  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGV 330

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           G+ K A +L   + +     +VVTYNI+I+ LC D
Sbjct: 331 GKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKD 365



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 81/165 (49%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N  S S L+  + + ++   A  + + ML +G   +V  YN L  GL    +  +A  L 
Sbjct: 106 NFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLL 165

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            EM+++ +  D  +Y T I G C+   + +A++L   ++       +  +  LID  CK+
Sbjct: 166 REMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKA 225

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G++  A  L + +    L AD++ Y  +I   C  G++D+ + LF
Sbjct: 226 GKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALF 270



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 80/169 (47%)

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           F+ + L+    +++  E A S Y +ML      + V  + L     ++ +   A  +   
Sbjct: 73  FAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLAL 132

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M + G A + + Y   + GLC+N    +AV L R +R      D+ +YN +I G C+   
Sbjct: 133 MLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKE 192

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+ A +L   +        +VT+ I+I A C  GKMD+A  L  +M+ K
Sbjct: 193 LEKALQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHK 241


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/364 (34%), Positives = 187/364 (51%), Gaps = 7/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   L   GC+     Y T++ GL   GH   A +LF+EM       G    P+  T
Sbjct: 160 ALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEM------LGRDVFPDVAT 213

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++  LC++G V ++  L  K+    ++ N  T N  I G C      EA  L +E M
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVAL-VERM 272

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V P+VV++N +M  LCK+ K+ EA++ L  M+  G  P+ F YNT++DG+C +G + 
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL       G   +  +Y  LING C   +IE AL L++E  +K +KPD+V+YN+L 
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL     +  A ++ +EM   G   D W Y   I+GLCK G I +A  +     +  Y 
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYL 452

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  +N LIDG CK  +L  A +L   +    +  DV+TYN +++ LC  GK  +  + 
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512

Query: 363 FLDM 366
           F +M
Sbjct: 513 FEEM 516



 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 200/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA    ++   GC P+ FTYNT+I+G C++G    A  L ++        G V  P+ V
Sbjct: 298 EAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFK----GFV--PDRV 351

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+GLC EG +++A ELF + + +++ P++V YNSL+ G C       A  +  EM
Sbjct: 352 TYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 411

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P++ ++N+I+N LCK G + +A+ ++   I  G  P+ F +NTL+DG+C   ++
Sbjct: 412 VEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKL 471

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M + G   +V +Y+ ++NG CK  + +     + EM+ KG +P+ + YN L
Sbjct: 472 DSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 531

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +I+Q+E A  +   M + G+  D  ++ T I G C+NG +  A  LF+ L    Y
Sbjct: 532 IENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 591

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 +N LI        +++A ++F  +       D+ TY I++  LC    +D+A  
Sbjct: 592 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYA 651

Query: 362 LFLDMEAK 369
              +M +K
Sbjct: 652 HLAEMISK 659



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 191/369 (51%), Gaps = 7/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME+ AL  K+   G   N FT N  I GLC  G    A+ L E M       G    P+ 
Sbjct: 228 MESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERM-------GAYVAPDV 280

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ GLCK+  V +A +   +M ++   P+  TYN++I G+C +    EA  L  +
Sbjct: 281 VTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKD 340

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ V++  ++N LC  G ++ A  L        ++P+  VYN+L+ G C  G 
Sbjct: 341 AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 400

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++   M   GC  ++++Y+I+ING CK   I  A  + ++ + KG  PDV  +NT
Sbjct: 401 ILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 460

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +++ A +L + M  +G+A D   Y + ++GLCK G   E  E F  + +  
Sbjct: 461 LIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKG 520

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   YN LI+  CK  +L+ A  +   + +  L+ D V++N +IH  C +G +D A 
Sbjct: 521 CRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAY 580

Query: 361 DLFLDMEAK 369
            LF  ++ K
Sbjct: 581 LLFQKLDEK 589



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/335 (31%), Positives = 174/335 (51%), Gaps = 22/335 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P+++TYN +INGLC+ G+ +  A+ + + +  G         P+  T+ T+IDG CK
Sbjct: 415 GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGY-------LPDVFTFNTLIDGYCK 467

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +D A +L  +M    I P+V+TYNS+++G C A    E    F EM+ +G +PN ++
Sbjct: 468 RLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 527

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N+++   CK  +++EAS ++  M Q G+ P+A  +NTL+ GFC  G ++ A  LF  ++
Sbjct: 528 YNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLD 587

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G      +++ILI  Y     ++ A  ++ EM+SKG KPD+  Y  L  GL +   V+
Sbjct: 588 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVD 647

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-----------RILKY 301
           RA+    EM   G       +   ++ L  N  + EAV +   +            IL  
Sbjct: 648 RAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILST 707

Query: 302 E-LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
           +  +I A   L++ L K G   I++  +  L  GV
Sbjct: 708 DKKEIAAPKILVEELMKKGH--ISYRAYEVLHEGV 740



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 149/333 (44%), Gaps = 7/333 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y   I    R G    A++ FE M          C P    Y  I+D L    + D+A +
Sbjct: 74  YVASIQAYARAGRLRAAVDAFERMDL------FACPPAAPAYNAIMDALVNAAYHDQAHK 127

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           ++++M    + P+  T+   +  FC     + A  L   + ++G      ++  ++  L 
Sbjct: 128 VYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLY 187

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
            +G    A  L + M+   V P+   +N ++   C  G V  +  L   +   G   N F
Sbjct: 188 AHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKF 247

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           + +I I G C++  +E A++L  E +   + PDVV YNTL  GL +  +V+ A +    M
Sbjct: 248 TCNIWIRGLCEDGRLEEAVALV-ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              G   D + Y T IDG CK+G + EA EL +      +  D   Y  LI+GLC  G +
Sbjct: 307 MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDI 366

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           + A ELF       L  D+V YN ++  LC  G
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 399



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 150/344 (43%), Gaps = 37/344 (10%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT--YNSLIHGFCYANDWNEAKCLFI 119
            Y  +I  L   G +D   +  L     ++ P+ +   Y + I  +  A     A   F 
Sbjct: 37  AYRALIRELVSAGRLDDV-DAALASARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFE 95

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M      P   ++N IM+ L      D+A ++   M+  GV P+A  +   +  FCLTG
Sbjct: 96  RMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTG 155

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R + A  L  S+   GC     +Y  ++ G   +     A  L+ EML + + PDV  +N
Sbjct: 156 RPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL--- 296
            +   L +   V  +  L  ++ + G++A+ +    +I GLC++G + EAV L   +   
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY 275

Query: 297 ---RILKYELDIRA----------------------------YNCLIDGLCKSGRLKIAW 325
               ++ Y   +R                             YN +IDG CKSG L+ A 
Sbjct: 276 VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEAT 335

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           EL +       + D VTY  +I+ LCA+G +++A +LF + +AK
Sbjct: 336 ELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK 379


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 191/365 (52%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF + +  G  PN+ T N LIN  C   H   A ++F  +            P+ +T  
Sbjct: 114 SLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYH------PDAITLN 167

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC  G + +A     K+  +    + V+Y +LI+G C A +      L  ++   
Sbjct: 168 TLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH 227

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P+VV +  I++ LCKN ++ +A  L   MI  G+ PN F YNTL+ GFC+ G +  A
Sbjct: 228 SVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEA 287

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M+      +V++++ILI+   K  +I+ A+SL+ EM  K + P++V Y +L  G
Sbjct: 288 FSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDG 347

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L + H +ERA  L  +M+  G+  D ++Y   +D LCK G +  A + F+ L +  Y L+
Sbjct: 348 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLN 407

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +R YN +I+GLCK+G      +L   +     + D +T+  +I AL    + DKA     
Sbjct: 408 VRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLR 467

Query: 365 DMEAK 369
           +M A+
Sbjct: 468 EMIAR 472



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 96/312 (30%), Positives = 155/312 (49%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P T  +  I+  L K         LF + +   + PN+ T N LI+ FC+      A  +
Sbjct: 91  PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G  P+ ++ N ++  LC  G++  A    + ++  G + +   Y TL++G C 
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCK 210

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G       L   +E    K +V  Y+ +I+  CKNK +  A  LYSEM+ KGI P+V  
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNTL  G   +  ++ AF L +EM+   +  D + +   ID L K G I EA+ LF  ++
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +I  Y  LIDGLCK+  L+ A  L + +    +  DV +Y I++ ALC  G+++
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390

Query: 358 KARDLFLDMEAK 369
            A+  F  +  K
Sbjct: 391 NAKQFFQHLLVK 402



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 148/290 (51%), Gaps = 6/290 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++F  +   G  P+  T NTLI GLC  G    AL   +++     +       + V+
Sbjct: 147 AFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQL------DQVS 200

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+GLCK G       L  K++  ++ P+VV Y ++IH  C      +A  L+ EM+
Sbjct: 201 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMI 260

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PNV ++N ++   C  G + EA  LL  M    + P+ + +N L+D     G+++
Sbjct: 261 VKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKID 320

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  M+      N+ +Y+ LI+G CKN  +E A++L  +M  +GI+PDV  Y  L 
Sbjct: 321 EAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 380

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
             L +  ++E A + F  +   G   +   Y   I+GLCK G   + ++L
Sbjct: 381 DALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 141/288 (48%), Gaps = 41/288 (14%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +  +Y TLINGLC+ G T     L  ++       G   KP+ V YTTII  LCK 
Sbjct: 193 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLE------GHSVKPDVVMYTTIIHCLCKN 246

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V  A +L+ +M  + I+PNV TYN+LI+GFC   +  EA  L  EM  + + P+V +F
Sbjct: 247 KRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTF 306

Query: 134 NVIMNELCKNGKMDEASRLLE-----------------------------------LMIQ 158
           N++++ L K GK+DEA  L E                                    M +
Sbjct: 307 NILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 366

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G++P+ + Y  L+D  C  GR+  A++ F  +   G   NV +Y+++ING CK      
Sbjct: 367 QGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 426

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            + L S+M  KG  PD + + T+   LFE  + ++A K   EM   G+
Sbjct: 427 VMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 125/230 (54%), Gaps = 6/230 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++ V G  PNVFTYNTLI G C  G+   A +L  EM   N        P+  
Sbjct: 251 DACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKN------INPDVY 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID L KEG +D+A  LF +MK +N+ PN+VTY SLI G C  +    A  L  +M
Sbjct: 305 TFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKM 364

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QG+QP+V S+ ++++ LCK G+++ A +  + ++  G   N   YN +++G C  G  
Sbjct: 365 KEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 424

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
               +L   ME  GC  +  ++  +I    +  E + A     EM+++G+
Sbjct: 425 GDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/370 (34%), Positives = 198/370 (53%), Gaps = 14/370 (3%)

Query: 2   EAAALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           EAA L   +   G  C PNV +Y T+I+G  + G    A  LF +M     + G+   PN
Sbjct: 233 EAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKML----DHGI--PPN 286

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VT  ++IDGLCK   +DKA+ +  +M DE+I PN  TYNSLIHG+  +  W EA  +  
Sbjct: 287 VVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILK 346

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G +PNVV+++++++ LCK+G   EA  +   MIQ G +PNA  Y +L+ G+   G
Sbjct: 347 EMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEG 406

Query: 180 RV---NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            +   N  ++L V     G +     ++I I  YCK   ++ A   +++M  +G  PD+V
Sbjct: 407 NLVDMNNVKDLMV---QNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIV 463

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y T+  GL +I +++ A   F +M   G++ D   + T I G   +G   +A ELF  +
Sbjct: 464 AYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM 523

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++  +N +ID L K G++  A +LF  +PR     +VV+YN MIH     G++
Sbjct: 524 MDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEV 583

Query: 357 DKARDLFLDM 366
            +   L  DM
Sbjct: 584 GEVMKLLDDM 593



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/356 (33%), Positives = 182/356 (51%), Gaps = 9/356 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G      T+  L+  LC    T  A+N+    M     E G  C P+  +YTT++ GLC 
Sbjct: 174 GLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMP----ELG--CTPDVFSYTTLLKGLCA 227

Query: 73  EGFVDKAKELFLKMKD--ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           E   ++A EL   M +  +N  PNVV+Y ++IHGF    D  +A  LF +M+D G+ PNV
Sbjct: 228 EKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNV 287

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V+ N +++ LCK   MD+A  +L+ MI   + PN   YN+L+ G+  +G+   A  +   
Sbjct: 288 VTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKE 347

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M   G + NV +YS+LI+  CK+     A  +++ M+  G KP+   Y +L  G      
Sbjct: 348 MSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGN 407

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           +     + D M ++G+      +   I   CK G + EA   F  ++   +  DI AY  
Sbjct: 408 LVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTT 467

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +IDGLCK GRL  A   F  +    L  D++T+N +IH     GK +KA +LF +M
Sbjct: 468 VIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEM 523



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 195/388 (50%), Gaps = 27/388 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G  PNV T N++I+GLC+      A  + ++M + +        PN  
Sbjct: 270 KAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH------IMPNCT 323

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I G    G   +A  +  +M  +   PNVVTY+ LI   C +    EA+ +F  M
Sbjct: 324 TYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSM 383

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PN  ++  +++     G + + + + +LM+Q G+RP   V+N  +  +C  GR+
Sbjct: 384 IQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRL 443

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   F  M+  G   ++ +Y+ +I+G CK   ++ A+S + +M+  G+ PD++ +NTL
Sbjct: 444 DEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTL 503

Query: 242 FIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
             G F +H + E+A +LF EM   G+  +   + + ID L K G + EA +LF  +    
Sbjct: 504 IHG-FALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAG 562

Query: 301 YELDIRAYNCLIDGLCKSGR---------------LKIAWELFRSLPRGV----LIADVV 341
            + ++ +YN +I G   +G                LK     F +L  G+    L  DVV
Sbjct: 563 AKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVV 622

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
           T   +I + C DG+++    LF +M  K
Sbjct: 623 TCKTLIDSCCEDGRIEDILTLFREMLGK 650



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 148/293 (50%), Gaps = 50/293 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----------E 51
           EA  +F  +   G +PN  TY +L++G    G+ +V +N  +++   NG          E
Sbjct: 375 EAREIFNSMIQSGQKPNASTYGSLLHGYATEGN-LVDMNNVKDLMVQNGMRPGRHVFNIE 433

Query: 52  FGVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
               CK                    P+ V YTT+IDGLCK G +D A   F +M D+ +
Sbjct: 434 IYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 493

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +P+++T+N+LIHGF     W +A+ LF EMMD+G+ PNV +FN ++++L K GK+ EA +
Sbjct: 494 SPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARK 553

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA-------------------EELFVSME 192
           L +LM + G +PN   YNT++ G+ + G V                        L   M 
Sbjct: 554 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 613

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           SMG K +V +   LI+  C++  IE  L+L+ EML K  K D +  N    G+
Sbjct: 614 SMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGV 666



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 137/282 (48%), Gaps = 6/282 (2%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + + P++ T+  LI   C A   N       +++  G++   V+F  ++  LC   +  +
Sbjct: 138 KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSD 197

Query: 149 ASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYSI 205
           A  + L  M ++G  P+ F Y TL+ G C   +   A EL   M   G  C  NV SY+ 
Sbjct: 198 AMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTT 257

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G+ K  ++  A +L+ +ML  GI P+VV  N++  GL ++  +++A  +  +M    
Sbjct: 258 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 317

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +   Y + I G   +G   EAV + + +       ++  Y+ LID LCKSG    A 
Sbjct: 318 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAR 377

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGK---MDKARDLFL 364
           E+F S+ +     +  TY  ++H    +G    M+  +DL +
Sbjct: 378 EIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMV 419



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/244 (29%), Positives = 120/244 (49%), Gaps = 3/244 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P++ +F ++++  C  G ++     L  +I+ G+R  A  +  L+   C   R + A 
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIYNTLF 242
            + +  M  +GC  +VFSY+ L+ G C  K+ E A  L   M   G    P+VV Y T+ 
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVI 259

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A+ LF +M  HG+  +     + IDGLCK   + +A  + + +      
Sbjct: 260 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 319

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G   SG+   A  + + + R     +VVTY+++I  LC  G   +AR++
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379

Query: 363 FLDM 366
           F  M
Sbjct: 380 FNSM 383


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  207 bits (528), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 183/345 (53%), Gaps = 1/345 (0%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PNV TYNT++NGLC+      AL LF++M     E    C+P+ ++Y+T+ID LCK  
Sbjct: 176 CSPNVITYNTVVNGLCKANRIDEALELFDDMEK-RYEASHGCEPDVISYSTVIDALCKAQ 234

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VDKA E F +M+     PNVVTY+SLI G C  +  +E   L + M ++G   N++ FN
Sbjct: 235 RVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFN 294

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ L KN + ++A +  E +++ G +PN   YN  + G C  GRV+ A  + + M   
Sbjct: 295 AMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVES 354

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
               +V +YS +I+G+CK   ++ A  +++ M+     P  V + TL  G  E  +   A
Sbjct: 355 KVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA 414

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           F++ ++M   G       Y   +D +C    +  A+E++  ++  K + D   Y  LI  
Sbjct: 415 FRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQC 474

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           LC++ R+  A E    +    ++ +    + ++  LC  G++D+A
Sbjct: 475 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 519



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 181/358 (50%), Gaps = 12/358 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N +T   L+N   +      A  L +E      E   +C PN + YTT+I+G CK 
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKE------ELEPLCFPNEIMYTTVINGFCKA 124

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD+A EL  +MK+  +  +V+ +++LI G C     +EA   F  M ++   PNV+++
Sbjct: 125 GQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITY 183

Query: 134 NVIMNELCKNGKMDEASRLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N ++N LCK  ++DEA  L + M        G  P+   Y+T++D  C   RV++A E F
Sbjct: 184 NTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYF 243

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M ++GC  NV +YS LI+G CK       L L   M  KG   +++ +N +   L++ 
Sbjct: 244 KRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKN 303

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            + E+A + F+ + + G   +   Y   + GLCK G + EA  +   +   K   D+  Y
Sbjct: 304 DEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITY 363

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + +IDG CK+GR+  A ++F  +     I   VT+  ++H      K  +A  +  DM
Sbjct: 364 SSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 421



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 194/394 (49%), Gaps = 47/394 (11%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PN   Y T+ING C+ G    A  L +EM     E GV  K + + ++T+I GLC++G
Sbjct: 107 CFPNEIMYTTVINGFCKAGQVDQAFELLDEMK----ERGV--KMDVLLHSTLIQGLCRKG 160

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM-----MDQGVQPN 129
            +D+A E F  M +E  +PNV+TYN++++G C AN  +EA  LF +M        G +P+
Sbjct: 161 RIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPD 219

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V+S++ +++ LCK  ++D+A    + M  +G  PN   Y++L+DG C   R +   EL +
Sbjct: 220 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLL 279

Query: 190 SMESMG------------------------C-----------KHNVFSYSILINGYCKNK 214
            M+  G                        C           K NV +Y++ ++G CK  
Sbjct: 280 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 339

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++ A  +  EM+   + PDV+ Y+++  G  +  ++++A  +F  M  H        + 
Sbjct: 340 RVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFM 399

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T + G  ++    EA  +   +    +   ++ YN L+D +C +  ++ A E++  + R 
Sbjct: 400 TLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRK 459

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
               D  TY  +I  LC   ++D+A++    MEA
Sbjct: 460 KRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEA 493



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 177/423 (41%), Gaps = 61/423 (14%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------------ 48
           F ++R  GC PNV TY++LI+GLC+       L L   M                     
Sbjct: 243 FKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWK 302

Query: 49  NGEFGVVC-----------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           N E    C           KPN VTY   + GLCK G VD+A  + L+M +  + P+V+T
Sbjct: 303 NDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVIT 362

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y+S+I GFC A   ++A  +F  MM     P+ V+F  +++   ++ K  EA R+ E M+
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  P    YN LMD  C    V  A E++  M+    + +  +Y+ LI   C+ + ++
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVD 482

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE----------------- 260
            A      M +  + P+  I + L   L +  +V+ A  + D                  
Sbjct: 483 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542

Query: 261 ---------------MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                          ++  G  AD   Y   +  +CK G   EAVE+   + +     D 
Sbjct: 543 EELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDE 602

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  ++  LC   R++ A   F  +        +VTY ++I   C+    D+A  +F  
Sbjct: 603 GTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEA 662

Query: 366 MEA 368
           M A
Sbjct: 663 MVA 665



 Score =  121 bits (303), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 138/295 (46%), Gaps = 9/295 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++ V  C P+  T+ TL++G      +  A  + E+M N     G +  P   
Sbjct: 378 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA----GFI--PGLQ 431

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D +C    V+ A E++ KMK +   P+  TY  LI   C A   +EAK     M
Sbjct: 432 TYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V PN    + ++  LCK G++DEA  +L+ ++++G +P    +  L++   L  + 
Sbjct: 492 EADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKW 551

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   + S G   +  +YS+ +   CK  + + A+ +  +M+ KG++PD   Y  +
Sbjct: 552 EAASKL---LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAV 608

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L  + +VE A   F++M   G A     Y   I   C      EA  +F  +
Sbjct: 609 LRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAM 663



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 102/179 (56%), Gaps = 6/179 (3%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G +HN ++ ++L+N + K K  E A  L  E L     P+ ++Y T+  G  +  QV++A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           F+L DEM+  GV  D   + T I GLC+ G I EA+E F+++   +   ++  YN +++G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVITYNTVVNG 189

Query: 315 LCKSGRLKIAWELFRSLPRGVLIA-----DVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           LCK+ R+  A ELF  + +    +     DV++Y+ +I ALC   ++DKA + F  M A
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRA 248



 Score =  107 bits (267), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 110/216 (50%), Gaps = 8/216 (3%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G + NA+    L++ F    R   A  L        C  N   Y+ +ING+CK  +++ A
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             L  EM  +G+K DV++++TL  GL    +++ A + F  M     + +   Y T ++G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNG 189

Query: 280 LCKNGYIVEAVELFRTLRILKYEL------DIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
           LCK   I EA+ELF  +   +YE       D+ +Y+ +ID LCK+ R+  A+E F+ +  
Sbjct: 190 LCKANRIDEALELFDDME-KRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRA 248

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                +VVTY+ +I  LC   +  +  +L L M+ K
Sbjct: 249 VGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEK 284



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 38/257 (14%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P + TYN L++ +C       AL ++ +M     +      P+  TY  +I  LC+   V
Sbjct: 428 PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQ------PDCNTYAPLIQCLCRARRV 481

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP-------- 128
           D+AKE    M+ +N+ PN    ++L+   C   + +EA  +   +++ G QP        
Sbjct: 482 DEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKIL 541

Query: 129 ------------------------NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
                                   +  ++++ + E+CK GK DEA  ++E M+  GVRP+
Sbjct: 542 VEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPD 601

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              Y  ++   C   RV  A   F  M S GC   + +Y++LI   C     + A  ++ 
Sbjct: 602 EGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFE 661

Query: 225 EMLSKGIKPDVVIYNTL 241
            M++ G  P      TL
Sbjct: 662 AMVAAGFTPQAQTMRTL 678



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 60/138 (43%), Gaps = 6/138 (4%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           LR  G   +  TY+  +  +C+ G    A+ + E+M       GV  +P+  TY  ++  
Sbjct: 558 LRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK----GV--RPDEGTYVAVLRS 611

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC    V+ A   F KM      P +VTY  LI   C A+  +EA  +F  M+  G  P 
Sbjct: 612 LCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQ 671

Query: 130 VVSFNVIMNELCKNGKMD 147
             +   + + L   G  D
Sbjct: 672 AQTMRTLSSCLRDAGYQD 689


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/389 (32%), Positives = 190/389 (48%), Gaps = 26/389 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG-EFGVV----- 55
           E A L  ++   G  PN  TY  L+NGLCR G    A  L  ++   N   F ++     
Sbjct: 296 EGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILINGYV 355

Query: 56  --------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
                               C+P+  T+ T+I GLCK+G +  A ++   M      PN+
Sbjct: 356 KSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNL 415

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +TY +L+ GFC  N   EA  +  EM  +G + N++ +NV++  LCKNGK+ +A  +L  
Sbjct: 416 ITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGE 475

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G +P+ F +NTL+ G C   R   A  L+  M   G   N  +Y+ LI+ + +   
Sbjct: 476 MSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGA 535

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ AL L ++ML +G   D + YN L     ++   E+A  LFDEM R  +     +   
Sbjct: 536 IQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNL 595

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+GLC+ G +  A+EL R +       D+  YN LI+GLCK G ++ A+ LF  L    
Sbjct: 596 LINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEG 655

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  D +TYN +I   C  G  D A  L L
Sbjct: 656 IQPDAITYNTLICWHCRAGMFDDAYLLLL 684



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 190/366 (51%), Gaps = 11/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ + GC P+V T+N +I GLCR         L + M            PN +
Sbjct: 261 EALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG------FTPNDI 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC-LFIE 120
           TY  +++GLC+ G VD+A+ L  K+      PN V +  LI+G+  +   +EA   L+ +
Sbjct: 315 TYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHFTILINGYVKSGRLDEANAFLYDK 370

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G +P+V +FN +++ LCK G M  A  ++  M   G  PN   Y TL+DGFC   +
Sbjct: 371 MIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQ 430

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  +   M + G + N+  Y++L+   CKN ++  AL +  EM  KG KPD+  +NT
Sbjct: 431 LEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNT 490

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++ + E A  L+ +M   GV A+T  Y T I    + G I EA++L   +    
Sbjct: 491 LIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRG 550

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             LD   YN LI   CK G  + A  LF  + R  L+   ++ N++I+ LC  GK+  A 
Sbjct: 551 CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNAL 610

Query: 361 DLFLDM 366
           +L  DM
Sbjct: 611 ELLRDM 616



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 181/345 (52%), Gaps = 8/345 (2%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVT 62
           A L+ K+   GC P+VFT+NTLI+GLC+ G    A+++  +M ANG       C PN +T
Sbjct: 365 AFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANG-------CTPNLIT 417

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++DG CK+  +++A  +  +M  +    N++ YN L+   C      +A  +  EM 
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMS 477

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G +P++ +FN ++  LCK  + ++A  L   M+  GV  N   YNTL+  F   G + 
Sbjct: 478 DKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQ 537

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L   M   GC  +  +Y+ LI  +CK    E AL L+ EM+ K + P  +  N L 
Sbjct: 538 EALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLI 597

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL  + +V  A +L  +M   G+A D   Y + I+GLCK G I EA  LF  L+    +
Sbjct: 598 NGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQ 657

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            D   YN LI   C++G    A+ L         I + VT+ I++
Sbjct: 658 PDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILV 702



 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 192/365 (52%), Gaps = 11/365 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA +F ++   G  P V+T+  ++  LC       A +L  +M          C PN+V 
Sbjct: 192 AANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHG------CVPNSVV 245

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I  L K   V++A +L  +M      P+V T+N +I+G C  N  +E   L   M+
Sbjct: 246 YQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRML 305

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN +++ V+MN LC+ GK+DEA  LL  +      PN   +  L++G+  +GR++
Sbjct: 306 FRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV----PTPNDVHFTILINGYVKSGRLD 361

Query: 183 RAEE-LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A   L+  M   GC+ +VF+++ LI+G CK   +  A+ + ++M + G  P+++ Y TL
Sbjct: 362 EANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTL 421

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + +Q+E A  + +EM   G   +   Y   +  LCKNG + +A+++   +     
Sbjct: 422 LDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGC 481

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  +N LI GLCK  R + A  L+R +    +IA+ VTYN +IHA    G + +A  
Sbjct: 482 KPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALK 541

Query: 362 LFLDM 366
           L  DM
Sbjct: 542 LVNDM 546



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 155/343 (45%), Gaps = 32/343 (9%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P   +Y  ++D L        A  +F +M  + + P V T+  ++   C  N+ + A 
Sbjct: 169 CEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNAC 228

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M   G  PN V +  +++ L K  +++EA +LLE M  +G  P+   +N ++ G 
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS-------------- 221
           C   R++   +L   M   G   N  +Y +L+NG C+  +++ A                
Sbjct: 289 CRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFT 348

Query: 222 ------------------LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
                             LY +M+  G +PDV  +NTL  GL +   +  A  + ++M  
Sbjct: 349 ILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSA 408

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
           +G   +   Y T +DG CK   + EA  +   +    +EL+I  YN L+  LCK+G++  
Sbjct: 409 NGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPK 468

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A ++   +       D+ T+N +I  LC   + + A  L+ DM
Sbjct: 469 ALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDM 511



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/325 (28%), Positives = 149/325 (45%), Gaps = 33/325 (10%)

Query: 78  KAKELFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           +A  + L MK      P   +YN ++     AN  + A  +F EM+ +GV P V +F V+
Sbjct: 155 QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVV 214

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           M  LC   ++D A  LL  M + G  PN+ VY TL+       RVN A +L   M  MGC
Sbjct: 215 MKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGC 274

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +++ +I G C+   I     L   ML +G  P+ + Y  L  GL  + +V+ A  
Sbjct: 275 LPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQV 334

Query: 257 --------------------------------LFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                                           L+D+M ++G   D + + T I GLCK G
Sbjct: 335 LLNKVPTPNDVHFTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKG 394

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +  AV++   +       ++  Y  L+DG CK  +L+ A  +   +       +++ YN
Sbjct: 395 LMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYN 454

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
           +++ ALC +GK+ KA D+  +M  K
Sbjct: 455 VLLRALCKNGKVPKALDMLGEMSDK 479



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 90/174 (51%), Gaps = 6/174 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC  +  TYN LI   C+ G T  AL LF+EM   +        P+ +
Sbjct: 538 EALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKD------LVPSNI 591

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +   +I+GLC+ G V  A EL   M    + P+VVTYNSLI+G C   +  EA  LF ++
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL 651

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
             +G+QP+ +++N ++   C+ G  D+A  LL   ++    PN   +  L+  F
Sbjct: 652 QAEGIQPDAITYNTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 185/353 (52%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYNT ++ LC+ GH   AL + + M     +      P+  TY T+I+ L K 
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD------PDVFTYNTVINCLSKN 348

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+AK +  +M D    P+  T+N+LI   C  N   EA  L  E+  +G+ P+V +F
Sbjct: 349 GELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTF 408

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK G      RL E M   G  P+   YN L+D  C  G++  A +L   MES
Sbjct: 409 NILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMES 468

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+  CK   IE A  ++ +M + GI    V +NTL  GL +  +++ 
Sbjct: 469 NGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDD 528

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L ++M + G+      Y + +   CK G + +A ++  T+    +E+D+  Y  LI+
Sbjct: 529 ATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLIN 588

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GLCK+GR ++A +L R +    +      YN +I +L     +  A  LF +M
Sbjct: 589 GLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREM 641



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 188/354 (53%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+VFTYNT+IN L + G    A  +  +M +        C P+T T+ T+I  LC +
Sbjct: 330 GHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRG------CLPDTTTFNTLIVALCSQ 383

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A +L  ++  + ++P+V T+N LI+  C   D +    LF EM   G  P+ V++
Sbjct: 384 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTY 443

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC  GK+  A  LL+ M   G   +   YNT++D  C   R+  AEE+F  M++
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +++ LI+G CK K I+ A  L  +M+ +G++P  + YN++     +   +++
Sbjct: 504 HGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKK 563

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + + M  +G   D   Y T I+GLCK G    A++L R +RI       +AYN +I 
Sbjct: 564 AADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQ 623

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDM 366
            L +   L+ A  LFR +       D +TY I+   LC   G + +A D  ++M
Sbjct: 624 SLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEM 677



 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/319 (32%), Positives = 167/319 (52%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +L V G  P+V+T+N LIN LC+ G   + + LFEEM +        C P+ V
Sbjct: 388 EALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSG------CAPDEV 441

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC  G +  A +L  +M+      + VTYN++I   C      EA+ +F +M
Sbjct: 442 TYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQM 501

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  + V+FN +++ LCK  ++D+A+ L+E M++ G++P+   YN+++  +C  G +
Sbjct: 502 DAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDL 561

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A ++  +M + G + +V +Y  LING CK    + AL L   M  KGI+P    YN +
Sbjct: 562 KKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPV 621

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILK 300
              LF  + +  A  LF EM   G   D   Y+    GLC+  G I EA +    +    
Sbjct: 622 IQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKG 681

Query: 301 YELDIRAYNCLIDGLCKSG 319
           +  +  ++  L +GL   G
Sbjct: 682 FMPEFSSFRMLAEGLLNLG 700



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/360 (29%), Positives = 179/360 (49%), Gaps = 6/360 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           +L  FG + +   YN L+N L         + L E + N   + G+  +P+ VT  T+I 
Sbjct: 150 QLNTFGVQADTAVYNHLLNVLAEGSR----MKLLESVYNEMTDRGI--QPDVVTLNTLIK 203

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LC+   V  A  +  +M    + P+  T+ +L+ GF        A  +  +MM+ G  P
Sbjct: 204 ALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSP 263

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
             V+ NV++N  CK G++++A   ++  I  G  P+   YNT +   C  G V+ A ++ 
Sbjct: 264 TRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVM 323

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G   +VF+Y+ +IN   KN E++ A  + ++M+ +G  PD   +NTL + L   
Sbjct: 324 DLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQ 383

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
           +++E A  L  E+   G++ D + +   I+ LCK G     + LF  ++      D   Y
Sbjct: 384 NRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTY 443

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N LID LC  G+L  A +L + +         VTYN +I ALC   ++++A ++F  M+A
Sbjct: 444 NILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDA 503



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 35/279 (12%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           +  +   YN L++     +     + ++ EM D+G+QP+VV+ N ++  LC+  ++  A 
Sbjct: 156 VQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAV 215

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            +LE M    V P+   + TLM GF   G +  A  +   M   GC     + ++LINGY
Sbjct: 216 LMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGY 275

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +E AL    + ++ G +PD V YN                               
Sbjct: 276 CKMGRVEDALGYIQKEIADGFEPDQVTYN------------------------------- 304

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
               TF+  LC+NG++  A+++   +    ++ D+  YN +I+ L K+G L  A  +   
Sbjct: 305 ----TFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 360

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +     + D  T+N +I ALC+  ++++A DL  ++  K
Sbjct: 361 MVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVK 399



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   G E +V TY TLINGLC+ G T VAL L   M           +P   
Sbjct: 563 KAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG------IRPTPK 616

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  +I  L +   +  A  LF +M +    P+ +TY  +  G C       EA    +E
Sbjct: 617 AYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVE 676

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+++G  P   SF ++   L   G  D     +EL+I+
Sbjct: 677 MVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIELIIE 714


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 181/366 (49%), Gaps = 12/366 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME+ A  M +R      N+ TY TLIN  C  G    A      +            P++
Sbjct: 62  MESLAARMPVR------NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAG------LAPDS 109

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             YT+ + G C+ G    A  LFL M          TY +L+ G C A    EA  +F  
Sbjct: 110 HAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAG 169

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+   ++++++ LC  G+  EA  LL   +  G  PN  VYN L+DG+C TG 
Sbjct: 170 MWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGD 229

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++F  M+S GC  NV +Y+ LI G+CK+ ++E A+ LYS M+  G+ P+VV Y T
Sbjct: 230 LELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTT 289

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      +E AF+L   M+  G+A + W     ID LCK+G I EA +   +L    
Sbjct: 290 LIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKG 349

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +++   Y  +ID LCKSG+   A  L + +     + D   Y+ +I  LC + K+ +A 
Sbjct: 350 IKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAI 409

Query: 361 DLFLDM 366
            L  DM
Sbjct: 410 SLLNDM 415



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 172/365 (47%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF+ +   GC    FTY  L+ GLC  G    A+ +F  M          C P++ 
Sbjct: 127 HACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDG------CAPDSH 180

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ ++ GLC  G   +A  L      +   PNV  YN+LI G+C   D   A  +F  M
Sbjct: 181 VYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGM 240

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNV ++  ++   CK+GK++ A  L   MI+ G+ PN   Y TL+ G C  G +
Sbjct: 241 QSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHL 300

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L  SME+ G   N ++  +LI+  CK+  IE A      ++ KGIK + VIY ++
Sbjct: 301 EHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSM 360

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  + + A  L  ++   G   D   Y + IDGLC+   ++EA+ L   +     
Sbjct: 361 IDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGV 420

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +   +  LID   +  R      +   +    +  DVVTY + I + C DG+M+ A  
Sbjct: 421 QANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAES 480

Query: 362 LFLDM 366
           + + M
Sbjct: 481 MMIQM 485



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 144/294 (48%), Gaps = 6/294 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  ++  GC PNV TY  LI G C++G    A+ L+  M     E G+   PN VT
Sbjct: 233 AIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMI----EAGLA--PNVVT 286

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT+I G C EG ++ A  L   M+   + PN  T   LI   C      EA+     ++
Sbjct: 287 YTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLV 346

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ N V +  +++ LCK+GK D A  L++ +I  G  P+A +Y++L+DG C   ++ 
Sbjct: 347 QKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLL 406

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M   G + N   ++ILI+ + +    +    +   M + G+KPDVV Y    
Sbjct: 407 EAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFI 466

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
               +  ++E A  +  +M  HGV  +   Y T I G    G + +A    + +
Sbjct: 467 RSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNM 520



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 119/240 (49%)

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N+ ++  ++N  C  G +  A R L  +++ G+ P++  Y + + G+C TG    A  LF
Sbjct: 73  NLHTYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLF 132

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
           + M   GC    F+Y+ L+ G C    +  A+++++ M   G  PD  +Y+ +  GL   
Sbjct: 133 LLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGA 192

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +   A  L  +    G   +   Y   IDG C  G +  A+++F+ ++      ++R Y
Sbjct: 193 GRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTY 252

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             LI G CKSG+++ A  L+  +    L  +VVTY  +I   C++G ++ A  L   MEA
Sbjct: 253 TQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEA 312



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/433 (26%), Positives = 162/433 (37%), Gaps = 115/433 (26%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVC---- 56
            A  L+ ++   G  PNV TY TLI G C  GH   A  L   M A G       C    
Sbjct: 267 RAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLI 326

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                   K N V YT++ID LCK G  D A  L  K+  E   
Sbjct: 327 DALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFV 386

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ------------------------- 127
           P+   Y+SLI G C  N   EA  L  +M++ GVQ                         
Sbjct: 387 PDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMI 446

Query: 128 ----------PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
                     P+VV++ V +   C++G+M++A  ++  MI  GVRPN   YNTL+ G+  
Sbjct: 447 SDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYAN 506

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILI------NGY--------------------- 210
            G V++A     +M   GCK N  SY++L+      N Y                     
Sbjct: 507 LGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEE 566

Query: 211 ----------------------CKNK--EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
                                 C +K   +E A S    M S  + P   +Y  +    +
Sbjct: 567 LLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCY 626

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
            +  ++ A +  D M +        +YR  I  LC+ G    A  +F  +   +Y  D  
Sbjct: 627 RMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEI 686

Query: 307 AYNCLIDGLCKSG 319
           A+  LIDGL + G
Sbjct: 687 AWKILIDGLLQKG 699



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/336 (23%), Positives = 135/336 (40%), Gaps = 45/336 (13%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A  L  K+   G  P+   Y++LI+GLCR    + A++L  +M     +   V       
Sbjct: 373 AHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILID 432

Query: 56  ----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                  KP+ VTYT  I   C++G ++ A+ + ++M D  + P
Sbjct: 433 KHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRP 492

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK-------- 145
           N+ TYN+LI G+      ++A      M+D G +PN  S+ V++  L K           
Sbjct: 493 NLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADS 552

Query: 146 --------MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
                   M     LLE +I++     ++VY+  +       R+  A+   V M+S    
Sbjct: 553 ISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLT 612

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +   Y+ +I    + K ++ AL     M+ +   P +  Y  +   L E      A  +
Sbjct: 613 PSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSI 672

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           F ++       D  A++  IDGL + G   +   L 
Sbjct: 673 FGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLL 708



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 4/207 (1%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P     NTL+      G ++  E L   M       N+ +Y+ LIN YC   ++  A   
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPV----RNLHTYTTLINAYCHAGDLPAAKRH 96

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
            S +L  G+ PD   Y +  +G         A +LF  M + G A   + Y   + GLC 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + EA+ +F  +       D   Y+ ++ GLC +GR   A  L         + +V  
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAV 216

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           YN +I   C+ G ++ A D+F  M++K
Sbjct: 217 YNALIDGYCSTGDLELAIDIFKGMQSK 243



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 24/257 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++ +++   G  PN+ TYNTLI G    G    A +  + M + NG     CKPN  
Sbjct: 477 DAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMID-NG-----CKPNDE 530

Query: 62  TYTTIIDGLCKEG--------------FVDKA--KELFLKMKDENINPNVVTYNSLIHGF 105
           +YT ++  L K+                VD    +EL  ++     +     Y+  I   
Sbjct: 531 SYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCL 590

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM-DEASRLLELMIQIGVRPN 164
              +   EAK   + M    + P+   +   M E C   K+  EA R L+ M++    P 
Sbjct: 591 SKVDRLEEAKSFLVGMQSANLTPSEDVYTC-MIECCYRMKLLKEALRFLDSMVKRNYLPR 649

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              Y  ++   C  G  + A+ +F  + S     +  ++ ILI+G  +         L S
Sbjct: 650 LESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCSRLLS 709

Query: 225 EMLSKGIKPDVVIYNTL 241
            M  +  +P   IY+ L
Sbjct: 710 FMEEQNCRPGSAIYSRL 726



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 6/168 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C    + Y+  I  L +      A +    M + N        P+   YT +I+   +  
Sbjct: 576 CSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSAN------LTPSEDVYTCMIECCYRMK 629

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            + +A      M   N  P + +Y  +I   C    ++ AK +F +++ +    + +++ 
Sbjct: 630 LLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWK 689

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++++ L + G   + SRLL  M +   RP + +Y+ L     +T    
Sbjct: 690 ILIDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQ 737


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 191/358 (53%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+ ++  GCEPNV+TY  LI+GLC +G   VA+ LF  M+  +G F     PNTV
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR-DGVF-----PNTV 391

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+ L +   +  A  +   M     +PN+VTYN +I G+C   D  +A  +   M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N+V++N I+   C +G    A R+L+LM   G +P+ + Y  L+ GFC   ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   N  +Y+ LI+GYCK+++++ A SL   M   G +P+V  YN L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + +    A +L   M   G+  +   Y   IDGLCKNG    A+E+F  +     
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y+ LI  L + G+++ A  LF  L R  LI D +TY  MI A    GK++ A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689



 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 182/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   GCEPN  TY+TLINGLC +G    A +L  EM       G++  P   
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAH 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T T  I  LC  G  + A  LF+ MK++   PNV TY +LI G C +     A  LF  M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN V++N ++N L +N ++  A  +L LM + G  PN   YN ++ G+C+ G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +  +M   G   N+ +Y+ +I GYC +     AL +   M   G KPD   Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +I ++E AF LF+EM   G+  +   Y   IDG CK+  +  A  L   ++    
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +++ YN LI GL K      A EL + +    +  +VVTY  MI  LC +G    A +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 362 LFLDM 366
           +F  M
Sbjct: 622 MFNKM 626



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 184/369 (49%), Gaps = 8/369 (2%)

Query: 1   MEAAAL--FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           M AA +  + ++   G +PN+  YN +IN LC+ G+   A  + +++      F     P
Sbjct: 195 MTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV------FESEMSP 248

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +T TYT++I G C++  +D A ++F +M  E   PN VTY++LI+G C +   NEA  L 
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI 308

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+  G+ P   +    +  LC  G  ++A RL   M   G  PN + Y  L+ G C++
Sbjct: 309 REMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVS 368

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A  LF  M   G   N  +Y+ LIN   +N+ I+ A  + + M   G  P++V Y
Sbjct: 369 GLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N +  G   +   ++A  + + M + G +A+   Y T I G C +G    A+ +   +R 
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 488

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D  +Y  LI G CK  +++ A+ LF  +    L  + VTY  +I   C D K+D 
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 548

Query: 359 ARDLFLDME 367
           A  L   M+
Sbjct: 549 ATSLLEHMK 557



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G    +F Y+ L+  L R G T   ++ +  M +     GV  +PN + Y  +I+ LCK+
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GV--QPNLLIYNAVINALCKD 228

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +  K+ +  ++P+  TY S+I G C  +D + A  +F +M  +G +PN V++
Sbjct: 229 GNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++N LC +G+++EA  L+  MI  G+ P A      +   C  G    A  LFV M++
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ NV++Y+ LI+G C +  ++ A+ L+  M   G+ P+ V YN L   L E  +++ 
Sbjct: 349 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF + + M R+G + +   Y   I G C  G   +A+ +   +    +  ++  YN +I 
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C SG    A  +   +  G    D  +Y  +I   C   KM+ A  LF +M
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 149/302 (49%), Gaps = 6/302 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+ TYN +I G C  G    A+ +   M             N VTY TII G C  
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHS------ANLVTYNTIIKGYCDS 473

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A  +   M+D    P+  +Y  LI GFC  +    A  LF EM+D G+ PN V++
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++  CK+ K+D A+ LLE M + G RPN   YN L+ G       + AEEL   M  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV +Y+ +I+G CKN     AL ++++M+ +G  P+++ Y++L   L +  +VE 
Sbjct: 594 EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 653

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF E++RHG+  D   Y   I+    +G +  A      +     +  +  Y  LI 
Sbjct: 654 AENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 713

Query: 314 GL 315
           GL
Sbjct: 714 GL 715



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 177/419 (42%), Gaps = 65/419 (15%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GC+P+ ++Y  LI G C+      A  LF EM +       +C PN VTYT +IDG
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDG 539

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            CK+  +D A  L   MK     PNV TYN LIHG    N+++ A+ L   M+++G+ PN
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV++  +++ LCKNG    A  +   MI+ G  PN   Y++L+      G+V  AE LF 
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--------------KGIK--- 232
            +E  G   +  +Y  +I  Y  + ++E A +    M+               KG+K   
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 233 ----------PDVV--------------------------------IYNTLFIGLFEIHQ 250
                     PDVV                                + N L   L    +
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
              A +L   M   G+  D  AY + +  L +   +  A+ +F+ +     E+ +  Y  
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI  LC+  R K A   F ++       D V   ++I  L  DG  D   +    ME +
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 106 CYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           C++ +       F++M+ Q G++  + +++ ++  L + G           M+  GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN +++  C  G V  AE +   +       + F+Y+ +I G+C+  +++ AL +++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G +P+ V Y+TL  GL +  +V  AF L  EM  HG+          I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              +A  LF  ++    E ++  Y  LI GLC SG LK+A  LF  + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 345 IMIHALCADGKMDKA 359
            +I+ L  + ++  A
Sbjct: 395 ALINILVENRRIKYA 409



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 144/337 (42%), Gaps = 34/337 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV TY  +I+GLC+ G T +AL +F +M          C PN +TY+++I  L +E
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG------CLPNLLTYSSLIRALGQE 648

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A+ LF +++   + P+ +TY  +I  +  +     A      M+  G QP + ++
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 708

Query: 134 NVIMNEL--------------------CKNG----KMDEASRLLELMIQIGVRPNAFVYN 169
            V++  L                    C  G      D  S +   + ++    +  V N
Sbjct: 709 GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQN 768

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L+      GR   A EL  SM S G   +  +Y+ L+    + + ++ A+ ++  M ++
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G +  +  Y  L   L ++H+ + A   F+ M       D       IDGL ++GY    
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           +E    +   +Y      Y      L +    K +W+
Sbjct: 889 MEFLHIMETRRYMPSFHIYTI----LAREASKKRSWK 921



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 1/183 (0%)

Query: 188 FVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           F+ M S  G +  +F+YS L+    +       +  Y  MLS+G++P+++IYN +   L 
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +   V  A  +  ++    ++ DT+ Y + I G C+   +  A+++F  +     E +  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y+ LI+GLC SGR+  A++L R +    ++    T    I ALC  G  + A  LF+DM
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 367 EAK 369
           + K
Sbjct: 347 KNK 349



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 1/157 (0%)

Query: 211 CKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           C +KE       + +MLS+ G++  +  Y+ L I L  +         +  M   GV  +
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   I+ LCK+G + +A  + + +   +   D   Y  +I G C+   L  A ++F 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +     + VTY+ +I+ LC  G++++A DL  +M
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311



 Score = 38.1 bits (87), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 43/116 (37%), Gaps = 7/116 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   GCE ++  Y  LI  LC+      A   FE M            P+ V 
Sbjct: 818 AMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENM------LMRTWNPDDVV 871

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE-AKCL 117
              +IDGL ++G+ D   E    M+     P+   Y  L         W   A C+
Sbjct: 872 QAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCI 927


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 129/404 (31%), Positives = 202/404 (50%), Gaps = 46/404 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ + GCEP+V T+N +I+GLC+ G    A  L + M   +         + +
Sbjct: 253 EAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD------FTADAL 306

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK-CLFIE 120
               ++ GLC+ G VD+A+ +  K+     NPN V YN+LI+G+  +  + EAK  L+  
Sbjct: 307 IQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKN 362

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G +P+  +FN++++ LCK G +  A   L+ M++ G  PN   Y  L+DGFC  G 
Sbjct: 363 MVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGH 422

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A ++  SM + G   N   Y+ LI   CK+ +I+ AL +Y EM SKG KPD+  +N+
Sbjct: 423 FEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNS 482

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  ++E A  L+ +M   GV A+T  Y T I    +   I +A +L   +R   
Sbjct: 483 LIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRG 542

Query: 301 YELDIRAYNCLIDGLCK-----------------------------------SGRLKIAW 325
             LD   YN LI  LCK                                   +G++  A 
Sbjct: 543 CPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDAL 602

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  R + +  L  D+VTYN +I+ LC  G+  +A +LF  ++AK
Sbjct: 603 QFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 174/344 (50%), Gaps = 8/344 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+  + + G EP+ FT+N +I+GLC+ G+ + AL   +EM     E      PN +TYT 
Sbjct: 359 LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE------PNVITYTI 412

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK+G  ++A ++   M  + ++ N V YN LI   C      +A  ++ EM  +G
Sbjct: 413 LIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +P++ +FN ++  LCKN KM+EA  L   M+  GV  N   YNTL+  F     + +A+
Sbjct: 473 CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQAD 532

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   M   GC  +  +Y+ LI   CK    E  L L  +M  + I P +   N L    
Sbjct: 533 KLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSF 592

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +V  A +   +M + G+  D   Y + I+GLCK G   EA+ LF  L+      D 
Sbjct: 593 CRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDA 652

Query: 306 RAYNCLIDGLCKSGRLKIAWE-LFRSLPRGVLIADVVTYNIMIH 348
             YN LI   C  G    A + LF+ +  G  I + +T++I+I+
Sbjct: 653 VTYNTLISRYCYEGLFNDACQLLFKGVSNG-FIPNEITWSILIN 695



 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 6/320 (1%)

Query: 52  FGVVC-KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
           +GV C +P   +Y  +++ L        A  +F  M    I+P V T+  ++  FC  N+
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNE 215

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            + A  L  +M   G  PN + + ++++ L +N +++EA +LLE M  +G  P+   +N 
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++ G C  GR++ A +L   M       +      L++G C+  +++ A +    MLSK 
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA----MLSKI 331

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKL-FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
             P+ V+YNTL  G     + E A  L +  M   G   D + +   IDGLCK GY+V A
Sbjct: 332 PNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSA 391

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           +E    +    +E ++  Y  LIDG CK G  + A ++  S+    L  + V YN +I A
Sbjct: 392 LEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGA 451

Query: 350 LCADGKMDKARDLFLDMEAK 369
           LC DGK+  A  ++ +M +K
Sbjct: 452 LCKDGKIQDALQMYGEMSSK 471



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 117/241 (48%), Gaps = 29/241 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG---------------------------- 33
           +A  ++ ++   GC+P+++T+N+LI GLC+                              
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519

Query: 34  HTIVALNLFEEMANGNGEFGVV-CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           H  + L L ++     GE     C  + +TY  +I  LCK G  +K   L  +M  E I 
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++ + N LI+ FC     N+A     +M+ +G+ P++V++N ++N LCK G+  EA  L
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              +   G+ P+A  YNTL+  +C  G  N A +L     S G   N  ++SILIN + K
Sbjct: 640 FNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVK 699

Query: 213 N 213
           N
Sbjct: 700 N 700



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 8/145 (5%)

Query: 11  RVFGCE--PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++FG E  P++ + N LIN  CRTG    AL    +M     + G+   P+ VTY ++I+
Sbjct: 572 QMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMI----QRGLT--PDIVTYNSLIN 625

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLCK G   +A  LF  ++ + I+P+ VTYN+LI  +CY   +N+A  L  + +  G  P
Sbjct: 626 GLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIP 685

Query: 129 NVVSFNVIMNELCKNGKMDEASRLL 153
           N +++++++N   KN    E   +L
Sbjct: 686 NEITWSILINYFVKNNSDSEQFTIL 710



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 110/247 (44%), Gaps = 44/247 (17%)

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC--KHNVF------------- 201
           +Q G   +  VY  L+D     G     ++L   M+  GC  K ++F             
Sbjct: 86  LQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLP 145

Query: 202 ---------------------SYS----ILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
                                SY+    IL+ G C     + A +++ +MLS+GI P V 
Sbjct: 146 GQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCP----KVAPNVFYDMLSRGISPTVY 201

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +  +      +++V+ A  L  +M +HG   ++  Y+  I  L +N  + EA++L   +
Sbjct: 202 TFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEM 261

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            ++  E D++ +N +I GLCK+GR+  A +L   +      AD +    ++H LC  GK+
Sbjct: 262 FLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKV 321

Query: 357 DKARDLF 363
           D+AR + 
Sbjct: 322 DEARAML 328


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 121/362 (33%), Positives = 189/362 (52%), Gaps = 8/362 (2%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           MK R  G  P+V +Y+T+ING C  G     L L +EM           KPN  TY +II
Sbjct: 1   MKFR--GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKG------LKPNLYTYNSII 52

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
             LCK G VD A+ +  +M ++ I P+ V Y +LI GFC   +   A  LF EM  Q + 
Sbjct: 53  LLLCKSGKVDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIV 112

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+ +++  ++  LC+ GKM EA ++   M   GV P+   Y TL+DG+C +G + +A  L
Sbjct: 113 PDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSL 172

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M   G   NV +Y+ L +G CK  +++ A  L  EM  KG++ ++  YN+L  GL +
Sbjct: 173 HNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCK 232

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
              + +A KL +EM+  G+  DT  + T +D  CK G +V+A EL R +     +  +  
Sbjct: 233 SGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVIT 292

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +N L++G C SG L+    L   +    ++ +  TYN ++   C    M    +++  M 
Sbjct: 293 FNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC 352

Query: 368 AK 369
           A+
Sbjct: 353 AR 354



 Score =  201 bits (510), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 193/365 (52%), Gaps = 8/365 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++++ G +PN++TYN++I  LC++G    A  +  EM N     G+V  P+TV YTT
Sbjct: 32  LIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQ----GIV--PDTVVYTT 85

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK G +  A +LF +M+ + I P+ + Y ++I G C      EA  +F +M  +G
Sbjct: 86  LIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRG 145

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+P+ V++  +++  CK+G+M++A  L   M+Q G+ PN   Y  L DG C  G+V+ A 
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           EL   M   G + N+ +Y+ L+NG CK+  I  A+ L  EM   G+ PD + + TL    
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  ++ +A +L  EM   G+      +   ++G C +G + +   L   +       + 
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             YN L+   C    ++   E+++ +  RGV+  D  TYNI+I   C    M +A  L  
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVM-PDSNTYNILIKGHCKARNMKEAWFLHK 384

Query: 365 DMEAK 369
           +M  K
Sbjct: 385 EMAEK 389



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 180/346 (52%), Gaps = 6/346 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   Y  +I GLCR G  + A  +F +M      F    +P+ VTYTT+IDG CK G +
Sbjct: 113 PDFIAYTAVICGLCRCGKMMEADKVFNKM------FSRGVEPDEVTYTTLIDGYCKSGEM 166

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           +KA  L  +M    + PNVVTY +L  G C     + A  L  EM  +G+Q N+ ++N +
Sbjct: 167 EKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSL 226

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LCK+G + +A +L+E M   G+ P+   + TLMD +C TG + +A EL   M   G 
Sbjct: 227 VNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGL 286

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           +  V ++++L+NG+C +  +E    L + ML KGI P+   YN+L       + +    +
Sbjct: 287 QPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTE 346

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           ++  M   GV  D+  Y   I G CK   + EA  L + +    + L   +YN +I G  
Sbjct: 347 IYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFF 406

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           K  ++  A ELF  + R  + AD   YN+ +     +G M+ A +L
Sbjct: 407 KKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALEL 452



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 183/353 (51%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   Y TLI+G C+ G+   A  LF+EM        +V  P+ + YT +I GLC+ 
Sbjct: 75  GIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQR----IV--PDFIAYTAVICGLCRC 128

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A ++F KM    + P+ VTY +LI G+C + +  +A  L  +M+  G+ PNVV++
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             + + LCK G++D A+ LL  M   G++ N   YN+L++G C +G + +A +L   ME 
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +++ L++ YCK  E+  A  L  EML +G++P V+ +N L  G      +E 
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED 308

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             +L   M   G+  +T  Y + +   C    +    E+++ +       D   YN LI 
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIK 368

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G CK+  +K AW L + +          +YN +I       K+ +AR+LF +M
Sbjct: 369 GHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEM 421



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 164/327 (50%), Gaps = 6/327 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  +F K+   G EP+  TY TLI+G C++G    A +L  +M            PN 
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG------LTPNV 185

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT + DGLCK G VD A EL  +M  + +  N+ TYNSL++G C + +  +A  L  E
Sbjct: 186 VTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEE 245

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+ ++F  +M+  CK G+M +A  LL  M+  G++P    +N LM+GFC++G 
Sbjct: 246 MEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGM 305

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +   E L   M   G   N  +Y+ L+  YC    +     +Y  M ++G+ PD   YN 
Sbjct: 306 LEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNI 365

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   ++ A+ L  EM   G      +Y + I G  K   I EA ELF  +R   
Sbjct: 366 LIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREG 425

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWEL 327
              D   YN  +D     G ++ A EL
Sbjct: 426 MAADAEIYNLFVDISYGEGNMETALEL 452



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 110/226 (48%), Gaps = 6/226 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++ V G  P+  T+ TL++  C+TG  + A  L  EM +         +P  +
Sbjct: 238 QAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRG------LQPTVI 291

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++G C  G ++  + L   M ++ I PN  TYNSL+  +C  N+      ++  M
Sbjct: 292 TFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGM 351

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+  ++N+++   CK   M EA  L + M + G    A  YN+++ GF    ++
Sbjct: 352 CARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKI 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           + A ELF  M   G   +   Y++ ++       +E AL L  E +
Sbjct: 412 SEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAI 457



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 6/145 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  TYN+L+   C   +      +++ M       GV+  P++ TY  +I G CK 
Sbjct: 320 GIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMC----ARGVM--PDSNTYNILIKGHCKA 373

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A  L  +M ++  N    +YNS+I GF      +EA+ LF EM  +G+  +   +
Sbjct: 374 RNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIY 433

Query: 134 NVIMNELCKNGKMDEASRLLELMIQ 158
           N+ ++     G M+ A  L +  I+
Sbjct: 434 NLFVDISYGEGNMETALELCDEAIE 458


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 191/358 (53%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+ ++  GCEPNV+TY  LI+GLC +G   VA+ LF  M+  +G F     PNTV
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR-DGVF-----PNTV 391

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+ L +   +  A  +   M     +PN+VTYN +I G+C   D  +A  +   M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N+V++N I+   C +G    A R+L+LM   G +P+ + Y  L+ GFC   ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   N  +Y+ LI+GYCK+++++ A SL   M   G +P+V  YN L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + +    A +L   M   G+  +   Y   IDGLCKNG    A+E+F  +     
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y+ LI  L + G+++ A  LF  L R  LI D +TY  MI A    GK++ A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 182/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   GCEPN  TY+TLINGLC +G    A +L  EM       G++  P   
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAH 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T T  I  LC  G  + A  LF+ MK++   PNV TY +LI G C +     A  LF  M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 381

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN V++N ++N L +N ++  A  +L LM + G  PN   YN ++ G+C+ G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +  +M   G   N+ +Y+ +I GYC +     AL +   M   G KPD   Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +I ++E AF LF+EM   G+  +   Y   IDG CK+  +  A  L   ++    
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +++ YN LI GL K      A EL + +    +  +VVTY  MI  LC +G    A +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 362 LFLDM 366
           +F  M
Sbjct: 622 MFNKM 626



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 184/369 (49%), Gaps = 8/369 (2%)

Query: 1   MEAAAL--FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           M AA +  + ++   G +PN+  YN +IN LC+ G+   A  + +++      F     P
Sbjct: 195 MTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV------FESEMSP 248

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +T TYT++I G C++  +D A ++F +M  E   PN VTY++LI+G C +   NEA  L 
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI 308

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+  G+ P   +    +  LC  G  ++A RL   M   G  PN + Y  L+ G C++
Sbjct: 309 REMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVS 368

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A  LF  M   G   N  +Y+ LIN   +N+ I+ A  + + M   G  P++V Y
Sbjct: 369 GLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N +  G   +   ++A  + + M + G +A+   Y T I G C +G    A+ +   +R 
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 488

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D  +Y  LI G CK  +++ A+ LF  +    L  + VTY  +I   C D K+D 
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 548

Query: 359 ARDLFLDME 367
           A  L   M+
Sbjct: 549 ATSLLEHMK 557



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G    +F Y+ L+  L R G T   ++ +  M +     GV  +PN + Y  +I+ LCK+
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GV--QPNLLIYNAVINALCKD 228

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +  K+ +  ++P+  TY S+I G C  +D + A  +F +M  +G +PN V++
Sbjct: 229 GNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++N LC +G+++EA  L+  MI  G+ P A      +   C  G    A  LFV M++
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ NV++Y+ LI+G C +  ++ A+ L+  M   G+ P+ V YN L   L E  +++ 
Sbjct: 349 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF + + M R+G + +   Y   I G C  G   +A+ +   +    +  ++  YN +I 
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C SG    A  +   +  G    D  +Y  +I   C   KM+ A  LF +M
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 149/302 (49%), Gaps = 6/302 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+ TYN +I G C  G    A+ +   M             N VTY TII G C  
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH------SANLVTYNTIIKGYCDS 473

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A  +   M+D    P+  +Y  LI GFC  +    A  LF EM+D G+ PN V++
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++  CK+ K+D A+ LLE M + G RPN   YN L+ G       + AEEL   M  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV +Y+ +I+G CKN     AL ++++M+ +G  P+++ Y++L   L +  +VE 
Sbjct: 594 EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 653

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF E++RHG+  D   Y   I+    +G +  A      +     +  +  Y  LI 
Sbjct: 654 AENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 713

Query: 314 GL 315
           GL
Sbjct: 714 GL 715



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 177/419 (42%), Gaps = 65/419 (15%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GC+P+ ++Y  LI G C+      A  LF EM +       +C PN VTYT +IDG
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDG 539

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            CK+  +D A  L   MK     PNV TYN LIHG    N+++ A+ L   M+++G+ PN
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV++  +++ LCKNG    A  +   MI+ G  PN   Y++L+      G+V  AE LF 
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--------------KGIK--- 232
            +E  G   +  +Y  +I  Y  + ++E A +    M+               KG+K   
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 233 ----------PDVV--------------------------------IYNTLFIGLFEIHQ 250
                     PDVV                                + N L   L    +
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
              A +L   M   G+  D  AY + +  L +   +  A+ +F+ +     E+ +  Y  
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI  LC+  R K A   F ++       D V   ++I  L  DG  D   +    ME +
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 106 CYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           C++ +       F++M+ Q G++  + +++ ++  L + G           M+  GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN +++  C  G V  AE +   +       + F+Y+ +I G+C+  +++ AL +++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G +P+ V Y+TL  GL +  +V  AF L  EM  HG+          I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              +A  LF  ++    E ++  Y  LI GLC SG LK+A  LF  + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 345 IMIHALCADGKMDKA 359
            +I+ L  + ++  A
Sbjct: 395 ALINILVENRRIKYA 409



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 30/322 (9%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV TY  +I+GLC+ G T +AL +F +M     E G  C PN +TY+++I  L +E
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI----EQG--CLPNLLTYSSLIRALGQE 648

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A+ LF +++   + P+ +TY  +I  +  +     A      M+  G QP + ++
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 708

Query: 134 NVIMNEL--------------------CKNG----KMDEASRLLELMIQIGVRPNAFVYN 169
            V++  L                    C  G      D  S +   + ++    +  V N
Sbjct: 709 GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQN 768

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L+      GR   A EL  SM S G   +  +Y+ L+    + + ++ A+ ++  M ++
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G +  +  Y  L   L ++H+ + A   F+ M       D       IDGL ++GY    
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888

Query: 290 VELFRTLRILKYELDIRAYNCL 311
           +E    +   +Y      Y  L
Sbjct: 889 MEFLHIMETRRYMPSFHIYTIL 910



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 1/183 (0%)

Query: 188 FVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           F+ M S  G +  +F+YS L+    +       +  Y  MLS+G++P+++IYN +   L 
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +   V  A  +  ++    ++ DT+ Y + I G C+   +  A+++F  +     E +  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y+ LI+GLC SGR+  A++L R +    ++    T    I ALC  G  + A  LF+DM
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 367 EAK 369
           + K
Sbjct: 347 KNK 349



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 1/157 (0%)

Query: 211 CKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           C +KE       + +MLS+ G++  +  Y+ L I L  +         +  M   GV  +
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   I+ LCK+G + +A  + + +   +   D   Y  +I G C+   L  A ++F 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +     + VTY+ +I+ LC  G++++A DL  +M
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311



 Score = 47.0 bits (110), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 22/221 (9%)

Query: 14  GCEPNVFTYNTLINGL--------------------CRTGHTIVALNLFEEMANGNGEFG 53
           GC+P ++TY  LI GL                    C  G+     +    M+    E  
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 759

Query: 54  VVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
                +      ++  L   G   +A EL   M  + + P+   YNSL+       + + 
Sbjct: 760 PGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDL 817

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A  +F  M  QG + ++  +  ++  LC+  +  EA    E M+     P+  V   L+D
Sbjct: 818 AMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLID 877

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           G    G  +   E    ME+     +   Y+IL     K +
Sbjct: 878 GLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 918


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/358 (35%), Positives = 191/358 (53%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+ ++  GCEPNV+TY  LI+GLC +G   VA+ LF  M+  +G F     PNTV
Sbjct: 338 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSR-DGVF-----PNTV 391

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+ L +   +  A  +   M     +PN+VTYN +I G+C   D  +A  +   M
Sbjct: 392 TYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNM 451

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N+V++N I+   C +G    A R+L+LM   G +P+ + Y  L+ GFC   ++
Sbjct: 452 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 511

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   N  +Y+ LI+GYCK+++++ A SL   M   G +P+V  YN L
Sbjct: 512 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + +    A +L   M   G+  +   Y   IDGLCKNG    A+E+F  +     
Sbjct: 572 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 631

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y+ LI  L + G+++ A  LF  L R  LI D +TY  MI A    GK++ A
Sbjct: 632 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 689



 Score =  203 bits (517), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 126/365 (34%), Positives = 182/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   GCEPN  TY+TLINGLC +G    A +L  EM       G++  P   
Sbjct: 268 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAH 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T T  I  LC  G  + A  LF+ MK++   PNV TY +LI G C +     A  LF  M
Sbjct: 322 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRM 381

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN V++N ++N L +N ++  A  +L LM + G  PN   YN ++ G+C+ G  
Sbjct: 382 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDP 441

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +  +M   G   N+ +Y+ +I GYC +     AL +   M   G KPD   Y  L
Sbjct: 442 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +I ++E AF LF+EM   G+  +   Y   IDG CK+  +  A  L   ++    
Sbjct: 502 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 561

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +++ YN LI GL K      A EL + +    +  +VVTY  MI  LC +G    A +
Sbjct: 562 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 621

Query: 362 LFLDM 366
           +F  M
Sbjct: 622 MFNKM 626



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 184/369 (49%), Gaps = 8/369 (2%)

Query: 1   MEAAAL--FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           M AA +  + ++   G +PN+  YN +IN LC+ G+   A  + +++      F     P
Sbjct: 195 MTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKV------FESEMSP 248

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +T TYT++I G C++  +D A ++F +M  E   PN VTY++LI+G C +   NEA  L 
Sbjct: 249 DTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLI 308

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+  G+ P   +    +  LC  G  ++A RL   M   G  PN + Y  L+ G C++
Sbjct: 309 REMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVS 368

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A  LF  M   G   N  +Y+ LIN   +N+ I+ A  + + M   G  P++V Y
Sbjct: 369 GILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N +  G   +   ++A  + + M + G +A+   Y T I G C +G    A+ +   +R 
Sbjct: 429 NEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRD 488

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D  +Y  LI G CK  +++ A+ LF  +    L  + VTY  +I   C D K+D 
Sbjct: 489 GGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDT 548

Query: 359 ARDLFLDME 367
           A  L   M+
Sbjct: 549 ATSLLEHMK 557



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G    +F Y+ L+  L R G T   ++ +  M +     GV  +PN + Y  +I+ LCK+
Sbjct: 175 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GV--QPNLLIYNAVINALCKD 228

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +  K+ +  ++P+  TY S+I G C  +D + A  +F +M  +G +PN V++
Sbjct: 229 GNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 288

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++N LC +G+++EA  L+  MI  G+ P A      +   C  G    A  LFV M++
Sbjct: 289 STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 348

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ NV++Y+ LI+G C +  ++ A+ L+  M   G+ P+ V YN L   L E  +++ 
Sbjct: 349 KGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 408

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF + + M R+G + +   Y   I G C  G   +A+ +   +    +  ++  YN +I 
Sbjct: 409 AFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 468

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C SG    A  +   +  G    D  +Y  +I   C   KM+ A  LF +M
Sbjct: 469 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 149/302 (49%), Gaps = 6/302 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+ TYN +I G C  G    A+ +   M             N VTY TII G C  
Sbjct: 420 GCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGH------SANLVTYNTIIKGYCDS 473

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A  +   M+D    P+  +Y  LI GFC  +    A  LF EM+D G+ PN V++
Sbjct: 474 GNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTY 533

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++  CK+ K+D A+ LLE M + G RPN   YN L+ G       + AEEL   M  
Sbjct: 534 TALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIE 593

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV +Y+ +I+G CKN     AL ++++M+ +G  P+++ Y++L   L +  +VE 
Sbjct: 594 EGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEE 653

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF E++RHG+  D   Y   I+    +G +  A      +     +  +  Y  LI 
Sbjct: 654 AENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIK 713

Query: 314 GL 315
           GL
Sbjct: 714 GL 715



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 177/419 (42%), Gaps = 65/419 (15%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GC+P+ ++Y  LI G C+      A  LF EM +       +C PN VTYT +IDG
Sbjct: 486 MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDG 539

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            CK+  +D A  L   MK     PNV TYN LIHG    N+++ A+ L   M+++G+ PN
Sbjct: 540 YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 599

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV++  +++ LCKNG    A  +   MI+ G  PN   Y++L+      G+V  AE LF 
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--------------KGIK--- 232
            +E  G   +  +Y  +I  Y  + ++E A +    M+               KG+K   
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 233 ----------PDVV--------------------------------IYNTLFIGLFEIHQ 250
                     PDVV                                + N L   L    +
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
              A +L   M   G+  D  AY + +  L +   +  A+ +F+ +     E+ +  Y  
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI  LC+  R K A   F ++       D V   ++I  L  DG  D   +    ME +
Sbjct: 840 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 898



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 106 CYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           C++ +       F++M+ Q G++  + +++ ++  L + G           M+  GV+PN
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN +++  C  G V  AE +   +       + F+Y+ +I G+C+  +++ AL +++
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G +P+ V Y+TL  GL +  +V  AF L  EM  HG+          I  LC  G
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 334

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              +A  LF  ++    E ++  Y  LI GLC SG LK+A  LF  + R  +  + VTYN
Sbjct: 335 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYN 394

Query: 345 IMIHALCADGKMDKA 359
            +I+ L  + ++  A
Sbjct: 395 ALINILVENRRIKYA 409



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 30/322 (9%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV TY  +I+GLC+ G T +AL +F +M     E G  C PN +TY+++I  L +E
Sbjct: 595 GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI----EQG--CLPNLLTYSSLIRALGQE 648

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A+ LF +++   + P+ +TY  +I  +  +     A      M+  G QP + ++
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 708

Query: 134 NVIMNEL--------------------CKNG----KMDEASRLLELMIQIGVRPNAFVYN 169
            V++  L                    C  G      D  S +   + ++    +  V N
Sbjct: 709 GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQN 768

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L+      GR   A EL  SM S G   +  +Y+ L+    + + ++ A+ ++  M ++
Sbjct: 769 ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G +  +  Y  L   L ++H+ + A   F+ M       D       IDGL ++GY    
Sbjct: 829 GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 888

Query: 290 VELFRTLRILKYELDIRAYNCL 311
           +E    +   +Y      Y  L
Sbjct: 889 MEFLHIMETRRYMPSFHIYTIL 910



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 1/183 (0%)

Query: 188 FVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           F+ M S  G +  +F+YS L+    +       +  Y  MLS+G++P+++IYN +   L 
Sbjct: 167 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 226

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +   V  A  +  ++    ++ DT+ Y + I G C+   +  A+++F  +     E +  
Sbjct: 227 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 286

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y+ LI+GLC SGR+  A++L R +    ++    T    I ALC  G  + A  LF+DM
Sbjct: 287 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 346

Query: 367 EAK 369
           + K
Sbjct: 347 KNK 349



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 1/157 (0%)

Query: 211 CKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           C +KE       + +MLS+ G++  +  Y+ L I L  +         +  M   GV  +
Sbjct: 155 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 214

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   I+ LCK+G + +A  + + +   +   D   Y  +I G C+   L  A ++F 
Sbjct: 215 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 274

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +     + VTY+ +I+ LC  G++++A DL  +M
Sbjct: 275 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 311



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 48/221 (21%), Positives = 81/221 (36%), Gaps = 22/221 (9%)

Query: 14  GCEPNVFTYNTLINGL--------------------CRTGHTIVALNLFEEMANGNGEFG 53
           GC+P ++TY  LI GL                    C  G+     +    M+    E  
Sbjct: 700 GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELD 759

Query: 54  VVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
                +      ++  L   G   +A EL   M  + + P+   YNSL+       + + 
Sbjct: 760 PGL--SVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDL 817

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A  +F  M  QG + ++  +  ++  LC+  +  EA    E M+     P+  V   L+D
Sbjct: 818 AMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLID 877

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           G    G  +   E    ME+     +   Y+IL     K +
Sbjct: 878 GLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 918


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 207/402 (51%), Gaps = 41/402 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   ++  G  P VF YN +I GLC+      A  LF+EM +          PN +T
Sbjct: 201 AIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRR------VAPNRIT 254

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG CK G +++A  +  +MK EN+ P ++T+NSL++G C A    EA+ +  EM 
Sbjct: 255 YNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME 314

Query: 123 DQGVQPNVVSF-----------------------------------NVIMNELCKNGKMD 147
             G  P+  ++                                   ++++N LCK G M+
Sbjct: 315 VYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNME 374

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A  +L+  ++ G+ P    +NT+++G+C  G +N+A      ME++G + N  +Y+ L+
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLV 434

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
             +C+ K +E A     +M+ KG+ P+V  YNTL  G       +R F++ +EM++ G+ 
Sbjct: 435 KKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLK 494

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +  +Y   I+ LCK+  I+EA  +   +       + + YN LIDG C +G+LK A+  
Sbjct: 495 PNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRF 554

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F  +    ++  +VTYNI+I+ LC  GK+ +A +L  ++  K
Sbjct: 555 FDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRK 596



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/437 (29%), Positives = 204/437 (46%), Gaps = 75/437 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  +++V   EP + T+N+L+NGLCR      A  + EEM      +G V  P+  
Sbjct: 270 EAFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEME----VYGFV--PDRF 323

Query: 62  TYTTIIDG-----------------------------------LCKEGFVDKAKELFLKM 86
           TYTT+ DG                                   LCKEG ++KA+E+  K 
Sbjct: 324 TYTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKF 383

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
            +  + P  V +N++++G+C   D N+A     +M   G++PN V++N ++ + C+   M
Sbjct: 384 LENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNM 443

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           +EA + ++ M++ GV PN   YNTL+DG+  +   +R  ++   ME  G K NV SY  L
Sbjct: 444 EEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCL 503

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN  CK+  I  A  +  +M+ +G+ P+  IYN L  G     +++ AF+ FDEM    +
Sbjct: 504 INCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREI 563

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                 Y   I+GLCK G ++EA  L   +       D+  YN LI G   +G ++ A E
Sbjct: 564 VPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALE 623

Query: 327 LFRSLPR-GV---------------------------------LIADVVTYNIMIHALCA 352
           L+ ++ + G+                                 L+ D V YN +IH    
Sbjct: 624 LYETMKKSGIKPTLNTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVE 683

Query: 353 DGKMDKARDLFLDMEAK 369
            G + KA  L   MEA+
Sbjct: 684 HGDVQKACSLHSAMEAQ 700



 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 194/368 (52%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  K    G  P    +NT++NG C+ G    A    E+M        V  +PN V
Sbjct: 375 KAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKME------AVGLRPNHV 428

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++   C+   +++A++   KM ++ + PNV TYN+LI G+  +  ++    +  EM
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PNV+S+  ++N LCK+  + EA  +L  M+  GV PNA +YN L+DG C+ G++
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A   F  M +      + +Y+ILING CK  ++  A +L SE+  KG+  DV+ YN+L
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      V++A +L++ M++ G+      Y   I G  K G ++   ++++ +  +  
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLVL-VEKIYQEMLQMNL 667

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN LI    + G ++ A  L  ++    +  D +TYN +I     +G+M K ++
Sbjct: 668 VPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKN 727

Query: 362 LFLDMEAK 369
           L  DM+ +
Sbjct: 728 LVNDMKIR 735



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 171/368 (46%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+   G  PNV TYNTLI+G  R+        + EEM           KPN +
Sbjct: 445 EAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKG------LKPNVI 498

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I+ LCK+  + +A+ +   M    + PN   YN LI G C A    +A   F EM
Sbjct: 499 SYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEM 558

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P +V++N+++N LCK GK+ EA  L   + + G+  +   YN+L+ G+   G V
Sbjct: 559 VAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNV 618

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A EL+ +M+  G K  + +Y  LI G C  + +     +Y EML   + PD VIYN L
Sbjct: 619 QKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNAL 677

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E   V++A  L   M+  G+  D   Y   I G  K G + +   L   ++I   
Sbjct: 678 IHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGL 737

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 Y+ LI G CK      A+  +R +        V   + +I  L  +G+   A  
Sbjct: 738 IPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADV 797

Query: 362 LFLDMEAK 369
           +  +M  K
Sbjct: 798 ICSEMNMK 805



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 158/320 (49%), Gaps = 5/320 (1%)

Query: 52  FGVVCKPNTVTYTTIIDGLCKEG-FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
           F +   P    ++ ++  +C E   V ++ EL++ MK + + P+V + N  +        
Sbjct: 103 FSLSSTPMKPLFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKR 162

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
           + +   LF E+++ G++P+   +   +    K G +  A  L+  M + GV P  FVYN 
Sbjct: 163 YEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNV 222

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++ G C   R+  AE+LF  M       N  +Y+ LI+GYCK  ++E A ++   M  + 
Sbjct: 223 VIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVEN 282

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           ++P ++ +N+L  GL     +E A ++ +EM+ +G   D + Y T  DG  K G +  ++
Sbjct: 283 VEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASI 342

Query: 291 ELFRTLRILKYELDIRAYNC--LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
            L  +   ++  + I  Y C  L++ LCK G ++ A E+ +      L    V +N +++
Sbjct: 343 TL--SEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN 400

Query: 349 ALCADGKMDKARDLFLDMEA 368
             C  G ++KA      MEA
Sbjct: 401 GYCQVGDINKAYTTIEKMEA 420



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 122/249 (48%), Gaps = 7/249 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P + TYN LINGLC+ G  + A NL  E+      F V+      TY ++I G    G V
Sbjct: 565 PTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVI------TYNSLISGYSSAGNV 618

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA EL+  MK   I P + TY+ LI G C        + ++ EM+   + P+ V +N +
Sbjct: 619 QKALELYETMKKSGIKPTLNTYHRLIAG-CGKEGLVLVEKIYQEMLQMNLVPDRVIYNAL 677

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++   ++G + +A  L   M   G++P+   YN L+ G    GR+++ + L   M+  G 
Sbjct: 678 IHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGL 737

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
                +Y ILI G+CK K+ +GA   Y EM   G  P V I + L  GL E  +   A  
Sbjct: 738 IPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDADV 797

Query: 257 LFDEMQRHG 265
           +  EM   G
Sbjct: 798 ICSEMNMKG 806



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 143/284 (50%), Gaps = 7/284 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +   +   G  PN   YN LI+G C  G    A   F+EM        +V  P  
Sbjct: 514 LEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVARE----IV--PTL 567

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I+GLCK+G V +A+ L  ++  + ++ +V+TYNSLI G+  A +  +A  L+  
Sbjct: 568 VTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYET 627

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G++P + +++ ++    K G +    ++ + M+Q+ + P+  +YN L+  +   G 
Sbjct: 628 MKKSGIKPTLNTYHRLIAGCGKEG-LVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGD 686

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V +A  L  +ME+ G + +  +Y+ LI G+ K   +    +L ++M  +G+ P    Y+ 
Sbjct: 687 VQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDI 746

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           L +G  ++   + A+  + EM  +G           I GL + G
Sbjct: 747 LIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEG 790


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 193/368 (52%), Gaps = 23/368 (6%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY+ +I  LC       A  LF+EM   NG       P+   YTT+ID  CK GF+
Sbjct: 220 PDTSTYSKVIGYLCNASKVEKAFQLFQEMKR-NG-----IAPDVYVYTTLIDSFCKAGFI 273

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A+  F +M+ +   PNVVTY +LIH +  +   ++A  ++  M+ +G  PN+V++  +
Sbjct: 274 EQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTAL 333

Query: 137 MNELCKNGKMDEASRLLELMIQIGVR-----------------PNAFVYNTLMDGFCLTG 179
           ++ LCK GK+++AS++ ++M +  V                  PN F Y  L+DG C   
Sbjct: 334 IDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAY 393

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V  A +L  SM   GC+ N   Y  LI+G CK  +++ A  +++ ML  G  P+V  Y+
Sbjct: 394 QVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYS 453

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L   LF+  +++ A K+  +M  +  A +   Y   IDGLCK G   EA +L   +   
Sbjct: 454 SLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEK 513

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++  Y  +IDG  KSGR++   EL + +       + VTY ++I+  C+ G +D+A
Sbjct: 514 GCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEA 573

Query: 360 RDLFLDME 367
             L  +M+
Sbjct: 574 HKLLEEMK 581



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 187/368 (50%), Gaps = 19/368 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-----------GVVCKPNTVT 62
           GC PN+ TY  LI+GLC+ G    A  +++ M   N E            G   +PN  T
Sbjct: 322 GCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFT 381

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++DGLCK   V +A++L   M  E   PN V Y++LI G C A   +EA+ +F  M+
Sbjct: 382 YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTML 441

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G  PNV +++ +++ L K+ ++D A ++L  M++    PN  +Y  ++DG C  G+ +
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTD 501

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L V ME  GC  NV +Y+ +I+G+ K+  +E  L L  +M SKG  P+ V Y  L 
Sbjct: 502 EAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLI 561

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                   ++ A KL +EM++         YR  I+G  +  +I     L+ +  I + +
Sbjct: 562 NHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNRE-FI---ASLYLSFEISEND 617

Query: 303 LDIRA--YNCLIDGLCKSGRLKIAWELFRSLP--RGVLIADVVTYNIMIHALCADGKMDK 358
               A  Y  LID   K+GRL+IA EL   L        A+   +  +I  L    K DK
Sbjct: 618 SVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADK 677

Query: 359 ARDLFLDM 366
           A +L+ DM
Sbjct: 678 AFELYADM 685



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 180/366 (49%), Gaps = 23/366 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF +++  G  P+V+ Y TLI+  C+ G    A N F+EM          C PN V
Sbjct: 240 KAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDG------CAPNVV 293

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I    K   V KA E++  M  +   PN+VTY +LI G C A    +A  ++  M
Sbjct: 294 TYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIM 353

Query: 122 MDQGV-----------------QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
             + V                 +PNV ++  +++ LCK  ++ EA  LL+ M   G  PN
Sbjct: 354 KKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPN 413

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             VY+ L+DG C  G+++ A+E+F +M   G   NV++YS LI+   K+K ++ AL + S
Sbjct: 414 HVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLS 473

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +ML     P+VVIY  +  GL ++ + + A+KL   M+  G   +   Y   IDG  K+G
Sbjct: 474 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSG 533

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + + +EL + +       +   Y  LI+  C +G L  A +L   + +      V  Y 
Sbjct: 534 RVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYR 593

Query: 345 IMIHAL 350
            +I   
Sbjct: 594 KVIEGF 599



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 191/375 (50%), Gaps = 28/375 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK- 72
           GC P+   +N+L++  CR+G    A  L ++M          C+P  V Y  +I G+C  
Sbjct: 107 GCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCG------CQPGYVVYNILIGGICSS 160

Query: 73  ----EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
               +  +D A++ + +M +  +  N V  ++     C    + +A  +  EMM +G  P
Sbjct: 161 EEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIP 220

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +  +++ ++  LC   K+++A +L + M + G+ P+ +VY TL+D FC  G + +A   F
Sbjct: 221 DTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWF 280

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ME  GC  NV +Y+ LI+ Y K++++  A  +Y  MLSKG  P++V Y  L  GL + 
Sbjct: 281 DEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKA 340

Query: 249 HQVERAFKLFDEMQRHGV-----------------AADTWAYRTFIDGLCKNGYIVEAVE 291
            ++E+A +++  M++  V                   + + Y   +DGLCK   + EA +
Sbjct: 341 GKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARD 400

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L +++ +   E +   Y+ LIDG CK+G+L  A E+F ++       +V TY+ +I  L 
Sbjct: 401 LLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLF 460

Query: 352 ADGKMDKARDLFLDM 366
            D ++D A  +   M
Sbjct: 461 KDKRLDLALKVLSKM 475



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/387 (31%), Positives = 184/387 (47%), Gaps = 24/387 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRT---GHTIVALNLFEEMANGNGEFGVVCKPN 59
           A  L  K+   GC+P    YN LI G+C +   G  +  L+L E+      E GVV   N
Sbjct: 131 AYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDV--LDLAEKAYGEMLEAGVVL--N 186

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V  +     LC  G  +KA  +  +M  +   P+  TY+ +I   C A+   +A  LF 
Sbjct: 187 KVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQ 246

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G+ P+V  +  +++  CK G +++A    + M + G  PN   Y  L+  +  + 
Sbjct: 247 EMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSR 306

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK------- 232
           +V++A E++  M S GC  N+ +Y+ LI+G CK  +IE A  +Y  M  + ++       
Sbjct: 307 KVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMH 366

Query: 233 ----------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
                     P+V  Y  L  GL + +QV+ A  L   M   G   +   Y   IDG CK
Sbjct: 367 FRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCK 426

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + EA E+F T+    Y+ ++  Y+ LID L K  RL +A ++   +       +VV 
Sbjct: 427 AGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVI 486

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           Y  MI  LC  GK D+A  L + ME K
Sbjct: 487 YTEMIDGLCKVGKTDEAYKLMVMMEEK 513



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/363 (30%), Positives = 177/363 (48%), Gaps = 14/363 (3%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +   G   + FT     + LC++G    AL+L E+      EF     P+TV YT +I G
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEK-----EEF----VPDTVLYTKMISG 51

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC+    ++A +   +M+  +  PNV+TY  L+ G          K +   M+ +G  P+
Sbjct: 52  LCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPS 111

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR-----A 184
              FN +++  C++G    A +LL+ M+Q G +P   VYN L+ G C +    +     A
Sbjct: 112 PRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLA 171

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           E+ +  M   G   N  + S      C   + E A ++  EM+SKG  PD   Y+ +   
Sbjct: 172 EKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGY 231

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    +VE+AF+LF EM+R+G+A D + Y T ID  CK G+I +A   F  +       +
Sbjct: 232 LCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPN 291

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  LI    KS ++  A E++  +       ++VTY  +I  LC  GK++KA  ++ 
Sbjct: 292 VVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYK 351

Query: 365 DME 367
            M+
Sbjct: 352 IMK 354



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 141/295 (47%), Gaps = 41/295 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G +PNV+TY++LI+ L +     +AL +  +M   +      C PN V
Sbjct: 432 EAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENS------CAPNVV 485

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +IDGLCK G  D+A +L + M+++  NPNVVTY ++I GF  +    +   L  +M
Sbjct: 486 IYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQM 545

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI-------GVR------------ 162
             +G  PN V++ V++N  C  G +DEA +LLE M Q        G R            
Sbjct: 546 SSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIA 605

Query: 163 --------------PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYSIL 206
                         P A VY  L+D F   GR+  A EL   + S       N   +  L
Sbjct: 606 SLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITL 665

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           I       + + A  LY++M+S+G  P++ I   L  GL  +++ E A +L D +
Sbjct: 666 IENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720


>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
 gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 198/366 (54%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A   ++++   G  PNV+T+N L+N LC+ G    A  +F+E+           +P  
Sbjct: 214 MVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTG------LQPTA 267

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V++ T+I+G CK G +++   L + M++  + P+V TY++LI G C      +A  LF E
Sbjct: 268 VSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKE 327

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D+G+ PN V+F  ++N  CKNG++D A  + + M   G++ +  +YNTL+DG C  G 
Sbjct: 328 MCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGY 387

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +    M   G   + F+Y+ L++G CK  ++E AL +  EM+ +GI+ D V +  
Sbjct: 388 FREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTA 447

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL    ++  A +   EM R G+  D   Y   +DG CK G +    +L + ++   
Sbjct: 448 IISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQSDG 507

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           +   +  YN L++GLCK G++K A  L  ++    ++ D +TYNI++   C  GK+   +
Sbjct: 508 HIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVVPDDITYNILLQGHCKHGKLGDFQ 567

Query: 361 DLFLDM 366
           ++  +M
Sbjct: 568 NVKTEM 573



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 157/290 (54%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A E +L++ D    PNV T+N L++  C      +A+ +F E+   G+QP  VSFN ++N
Sbjct: 216 ALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVSFNTLIN 275

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
             CK+G ++E  RL  +M +  V P+ F Y+ L+DG C   ++  A  LF  M   G   
Sbjct: 276 GYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMCDRGLVP 335

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N  +++ LING CKN  ++ AL +Y +M +KG+K D+V+YNTL  GL +      A K  
Sbjct: 336 NDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFREARKFV 395

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            EM + G+  D + Y T +DG CK G +  A+E+ + +     +LD  A+  +I GLC+ 
Sbjct: 396 GEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAIISGLCRD 455

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           G++  A    R + R  L  D  TY +++   C  G +     L  +M++
Sbjct: 456 GKIVDAERTLREMLRAGLKPDDGTYTMVMDGFCKKGDVKMGFKLLKEMQS 505



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 112/230 (48%)

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           + + GK   +S    ++   G   ++FV++ LM  +   G V+ A + F   +    K  
Sbjct: 137 VSRKGKGSASSVFASILETKGTLSSSFVFDALMSVYTEFGYVSDAIQCFRLTKKHNLKIP 196

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
                 L+    K      AL  Y E+L  G  P+V  +N L   L +  +V+ A  +FD
Sbjct: 197 FNGCKCLLERMIKMSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFD 256

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           E+++ G+     ++ T I+G CK+G + E   L   +   +   D+  Y+ LIDGLCK  
Sbjct: 257 EIRKTGLQPTAVSFNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKEC 316

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +L+ A  LF+ +    L+ + VT+  +I+  C +G++D A +++  M  K
Sbjct: 317 QLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTK 366


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 200/363 (55%), Gaps = 14/363 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F ++   G  P++ ++++LI  L R GH   AL  F EM       G+V  P+ 
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--PDN 432

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINP----NVVTYNSLIHGFCYANDWNEAKC 116
           V YT +IDG C+ G +  A    LKM+DE +      +VVTYN+ ++G C    + +A  
Sbjct: 433 VIYTILIDGFCRNGALSDA----LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM+++G+ P+  +F  ++   CK+G MD+A  L E M++  ++P+   YNTL+DGFC
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G + RA+EL+  M       +  SY  ++NG+C +  +  AL+L  +ML KGI+P++V
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             NTL  G      + +A++   +M  +G+  D+++Y T IDG  K   + +A  L   +
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + +I  YN +++G C  G+++ A ++ R +    +  D  TY+ +I+   +   M
Sbjct: 669 EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNM 728

Query: 357 DKA 359
            +A
Sbjct: 729 KEA 731



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 188/349 (53%), Gaps = 6/349 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E NV+T N ++N LC+       +    +M  G G F      + VTY T+I+  C+E
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFA-----DIVTYNTLINAYCRE 305

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A +L        + P ++TYN++++G C    ++ AK + IEM+  G+ PN  ++
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++ E+C+   + EA  + + M + GV P+   +++L+      G + +A   F  ME 
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +   Y+ILI+G+C+N  +  AL +  EML++G   DVV YNT   GL +      
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF+EM   G+  D + + T I G CK+G + +A+ LF  +     + D   YN LID
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           G CK+G +  A EL+  + R  +I D ++Y  +++  C+ G + +A +L
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 180/368 (48%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E +  F  LR  G   ++   N L+ GL RTG   +A  ++ E+  G  E       N  
Sbjct: 205 EGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIEL------NVY 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +++ LCK+   +        M+ + +  ++VTYN+LI+ +C      EA  L    
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P ++++N I+  LCK GK D A  +L  M+Q+G+ PNA  YNTL+   C    +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+E+F  M   G   ++ S+S LI    +N  +  AL  + EM   GI PD VIY  L
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      +  A K+ DEM   G   D   Y TF++GLCK     +A  LF  +     
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +  LI G CK G +  A  LF ++ R  L  D VTYN +I   C  G+M +A++
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 362 LFLDMEAK 369
           L+ DM  K
Sbjct: 559 LWDDMIRK 566



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 193/391 (49%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   ++ TYNTLIN  CR G    A  L    ++   E      P  +TY  I+ GLCK 
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME------PGLLTYNAILYGLCKI 340

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  D+AK++ ++M    + PN  TYN+L+   C  ++  EA+ +F EM  +GV P++VSF
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++  L +NG + +A      M + G+ P+  +Y  L+DGFC  G ++ A ++   M +
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460

Query: 194 MGCKHNVFSY-----------------------------------SILINGYCKNKEIEG 218
            GC  +V +Y                                   + LI GYCK+  ++ 
Sbjct: 461 RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDK 520

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL+L+  M+   +KPD V YNTL  G  +  ++ RA +L+D+M R  +  D  +Y T ++
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLN 580

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G C +G + EA+ L   +       ++   N LI G C+SG +  A+E    +    +I 
Sbjct: 581 GFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP 640

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D  +YN +I     +  ++KA  L  +ME +
Sbjct: 641 DSFSYNTLIDGYLKEANLEKAFILINEMEKR 671



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 176/339 (51%), Gaps = 8/339 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A   F ++   G  P+   Y  LI+G CR G    AL + +EM A G       C  + 
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG-------CFMDV 467

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T ++GLCK+     A  LF +M +  + P+  T+ +LI G+C   + ++A  LF  
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   ++P+ V++N +++  CK G+M  A  L + MI+  + P+   Y T+++GFC +G 
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  L   M   G + N+ + + LI GYC++ ++  A    S+M+S GI PD   YNT
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   +E+AF L +EM++ G+  +   Y   ++G C  G + EA ++ R +  + 
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
              D   Y+ LI+G      +K A+     + +  L+ D
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 132/272 (48%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           Y+ L+  +  A    E    F  +  +GV  ++ + N ++  L + G +D A  +   ++
Sbjct: 190 YDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVV 249

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + G+  N +  N +++  C   +          ME  G   ++ +Y+ LIN YC+   +E
Sbjct: 250 RGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVE 309

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L +   S+G++P ++ YN +  GL +I + +RA  +  EM + G+  +   Y T +
Sbjct: 310 EAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLL 369

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             +C+   I+EA E+F  +       D+ +++ LI  L ++G L  A   FR + R  ++
Sbjct: 370 VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIV 429

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            D V Y I+I   C +G +  A  +  +M A+
Sbjct: 430 PDNVIYTILIDGFCRNGALSDALKMRDEMLAR 461



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/205 (22%), Positives = 95/205 (46%)

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +Y+ L+  +    ++    E F  +   G   ++ + + L+ G  +   ++ A  +Y 
Sbjct: 187 GLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYG 246

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E++  GI+ +V   N +   L +  + E       +M+  GV AD   Y T I+  C+ G
Sbjct: 247 EVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + EA +L  +      E  +  YN ++ GLCK G+   A ++   + +  L  +  TYN
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            ++  +C    + +A+++F +M  +
Sbjct: 367 TLLVEICRRDNILEAQEIFDEMSRR 391


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  207 bits (526), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 133/377 (35%), Positives = 192/377 (50%), Gaps = 16/377 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   L   G   +V TY TL+ GLC+    +      EEM N   EFG V  P+  
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCK----VEEFEAGEEMMNEMIEFGFV--PSEA 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             + ++DGL K+G +  A +L  K+K   + P++  YN+LI+  C     +EA+ LF  M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN V+++++++  CK GK+D A   L  M ++G++   + Y++L+ G C  G++
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ LF  M + G K NV  Y+ LI+GYCK  E+  A  LY EM  KGI P+   +  L
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL   +++  A KLF EM    V  +   Y   I+G CK G  V A EL   +     
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP---------RGVLIADVVTYNIMIHALCA 352
             D   Y  LI GLC +GR+  A E    L           G L  +VVTY  +I+ LC 
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCL-PNVVTYTALINGLCK 620

Query: 353 DGKMDKARDLFLDMEAK 369
            G MDKA  L  +M A 
Sbjct: 621 IGLMDKAELLCREMLAS 637



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 196/399 (49%), Gaps = 52/399 (13%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTII 67
           K+   G +  V+ Y++LI+G C+ G    A +LF+EM ANG        KPN V YT++I
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG-------LKPNVVIYTSLI 467

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            G CKEG +  A  L+ +M  + I+PN  T+ +LI G C+AN   EA  LF EM++  V 
Sbjct: 468 SGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PN V++NV++   CK G    A  LL+ M++ G+ P+ + Y  L+ G C TGRV+ A E 
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587

Query: 188 FVSM--------ESMGCKHNVFSYSILINGYCK--------------------------- 212
              +        E  GC  NV +Y+ LING CK                           
Sbjct: 588 MNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYA 647

Query: 213 --------NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
                      IE A+ L+ ++L +G   + V YN L  G  ++ +++ A ++   M   
Sbjct: 648 CFLDYLTSEGNIEKAIQLH-DVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDS 706

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G++ D  +Y T I   C+ G + EA++L+ ++       D  AYN LI G C +G L  A
Sbjct: 707 GISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKA 766

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +EL   + R  +  +  TYN +IH  C    +    D F
Sbjct: 767 FELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  +  ++   GC+ +V TYN  I GLC+      A+    E+ N     G+  + + 
Sbjct: 232 IRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV----EIKNLLSYKGL--RADV 285

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++ GLCK    +  +E+  +M +    P+    ++L+ G     +   A  L  +
Sbjct: 286 GTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNK 345

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   GV P++  +N ++N +CK+GK+DEA  L   M   G+ PN   Y+ L+D FC  G+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A      M  +G K  V+ YS LI+G+CK  ++  A SL+ EM++ G+KP+VVIY +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  ++  AF+L+ EM   G++ +T+ +   I GLC    + EA +LF  +    
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   YN LI+G CK G    A+EL   +    L+ D  TY  +I  LC+ G++ +AR
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 361 DLFLDMEAK 369
           +   D++ +
Sbjct: 586 EFMNDLQGE 594



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 127/407 (31%), Positives = 185/407 (45%), Gaps = 48/407 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  K++ FG  P++F YN LIN +C+ G    A +LF  M +  G F     PN V
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH-KGLF-----PNDV 391

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +ID  CK G +D A     KM +  I   V  Y+SLI G C       AK LF EM
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++PNVV +  +++  CK G++  A RL   M   G+ PN + +  L+ G C   R+
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M       N  +Y++LI G+CK      A  L  EM+ KG+ PD   Y  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRH--------GVAADTWAYRTFIDGLCKNGYIVEAVELF 293
             GL    +V  A +  +++Q          G   +   Y   I+GLCK G + +A  L 
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLC 631

Query: 294 RT----------------LRILKYELDIR------------------AYNCLIDGLCKSG 319
           R                 L  L  E +I                    YN LI G CK G
Sbjct: 632 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLG 691

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           R++ A E+  ++    +  D ++Y+ +I+  C  G + +A  L+  M
Sbjct: 692 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESM 738



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 161/300 (53%), Gaps = 15/300 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++  +   PN  TYN LI G C+ G+T+ A  L +EM     E G+V  P+T 
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGLV--PDTY 566

Query: 62  TYTTIIDGLCKEGFVDKAKELF--LKMKDENIN------PNVVTYNSLIHGFCYANDWNE 113
           TY  +I GLC  G V +A+E    L+ + + +N      PNVVTY +LI+G C     ++
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDK 626

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A+ L  EM+     PN  ++   ++ L   G +++A +L +++++ G   N   YN L+ 
Sbjct: 627 AELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIR 685

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GFC  GR+  A E+ V+M   G   +  SYS +I  YC+  +++ A+ L+  ML++G+ P
Sbjct: 686 GFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNP 745

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           D V YN L  G     ++ +AF+L D+M R GV  +   Y + I G C    +    + F
Sbjct: 746 DTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYF 805



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MMD G+ P + + + ++N L +  +   A  L + ++  G+RP+ +VY  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             RA E+   MES GC  +V +Y++ I G CKN+ +  A+ + + +  KG++ DV  Y T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L +GL ++ + E   ++ +EM   G      A    +DGL K G I  A +L   ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  YN LI+ +CK G+L  A  LF ++    L  + VTY+I+I + C  GK+D A
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 116/247 (46%), Gaps = 36/247 (14%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV--CKPNTVTYTTIIDGLC 71
           G  P+ +TY  LI+GLC TG    A     ++     +   +  C PN VTYT +I+GLC
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLC 619

Query: 72  KEGFVDKAKELFLKMKDENINPN----------------------------------VVT 97
           K G +DKA+ L  +M   N  PN                                   VT
Sbjct: 620 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT 679

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           YN LI GFC      EA  + + M+D G+ P+ +S++ I+ E C+ G + EA +L E M+
Sbjct: 680 YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESML 739

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             GV P+   YN L+ G C+TG + +A EL   M   G K N  +Y+ LI+G C    + 
Sbjct: 740 NRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVS 799

Query: 218 GALSLYS 224
                +S
Sbjct: 800 STADYFS 806



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P   T + +++GL +      A  LF ++    + P+V  Y +++   C   D+  A+ +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   G   +V ++NV +  LCKN ++ EA  +  L+   G+R +   Y TL+ G C 
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
                  EE+   M   G   +  + S L++G  K   I  A  L +++   G+ P + +
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L   + +  +++ A  LF+ M   G+  +   Y   ID  CK G +  A+     + 
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +  +  +  Y+ LI G CK G+L+ A  LF  +    L  +VV Y  +I   C +G++ 
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 358 KARDLFLDMEAK 369
            A  L+ +M  K
Sbjct: 478 NAFRLYHEMTGK 489



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 132/283 (46%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M D  I P + T + +++G      +  A  LF E++  G++P+V  +  ++  LC+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
              A  ++  M   G   +   YN  + G C   RV  A E+   +   G + +V +Y  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+ G CK +E E    + +EM+  G  P     + L  GL +   +  AF L +++++ G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           VA   + Y   I+ +CK+G + EA  LF  +       +   Y+ LID  CK G+L +A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
                +    + A V  Y+ +I   C  GK+  A+ LF +M A
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 75/167 (44%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
              + +LI  Y +N+     L +   M+  GI P +   + +  GL  I Q   A  LFD
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           E+   G+  D + Y   +  LC+    + A E+   +     +L +  YN  I GLCK+ 
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           R+  A E+   L    L ADV TY  ++  LC   + +   ++  +M
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 200/363 (55%), Gaps = 14/363 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F ++   G  P++ ++++LI  L R GH   AL  F EM       G+V  P+ 
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERS----GIV--PDN 432

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINP----NVVTYNSLIHGFCYANDWNEAKC 116
           V YT +IDG C+ G +  A    LKM+DE +      +VVTYN+ ++G C    + +A  
Sbjct: 433 VIYTILIDGFCRNGALSDA----LKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADM 488

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM+++G+ P+  +F  ++   CK+G MD+A  L E M++  ++P+   YNTL+DGFC
Sbjct: 489 LFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFC 548

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G + RA+EL+  M       +  SY  ++NG+C +  +  AL+L  +ML KGI+P++V
Sbjct: 549 KAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLV 608

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             NTL  G      + +A++   +M  +G+  D+++Y T IDG  K   + +A  L   +
Sbjct: 609 TCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEM 668

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + +I  YN +++G C  G+++ A ++ R +    +  D  TY+ +I+   +   M
Sbjct: 669 EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNM 728

Query: 357 DKA 359
            +A
Sbjct: 729 KEA 731



 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 188/349 (53%), Gaps = 6/349 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E NV+T N ++N LC+       +    +M  G G F      + VTY T+I+  C+E
Sbjct: 252 GIELNVYTLNIMVNALCKDRKFENVMFFLSDM-EGKGVFA-----DIVTYNTLINAYCRE 305

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A +L        + P ++TYN++++G C    ++ AK + IEM+  G+ PN  ++
Sbjct: 306 GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATY 365

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++ E+C+   + EA  + + M + GV P+   +++L+      G + +A   F  ME 
Sbjct: 366 NTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMER 425

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +   Y+ILI+G+C+N  +  AL +  EML++G   DVV YNT   GL +      
Sbjct: 426 SGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFAD 485

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF+EM   G+  D + + T I G CK+G + +A+ LF  +     + D   YN LID
Sbjct: 486 ADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLID 545

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           G CK+G +  A EL+  + R  +I D ++Y  +++  C+ G + +A +L
Sbjct: 546 GFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNL 594



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 180/368 (48%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E +  F  LR  G   ++   N L+ GL RTG   +A  ++ E+  G  E       N  
Sbjct: 205 EGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIEL------NVY 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +++ LCK+   +        M+ + +  ++VTYN+LI+ +C      EA  L    
Sbjct: 259 TLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSF 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P ++++N I+  LCK GK D A  +L  M+Q+G+ PNA  YNTL+   C    +
Sbjct: 319 SSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNI 378

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+E+F  M   G   ++ S+S LI    +N  +  AL  + EM   GI PD VIY  L
Sbjct: 379 LEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTIL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      +  A K+ DEM   G   D   Y TF++GLCK     +A  LF  +     
Sbjct: 439 IDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGM 498

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +  LI G CK G +  A  LF ++ R  L  D VTYN +I   C  G+M +A++
Sbjct: 499 VPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKE 558

Query: 362 LFLDMEAK 369
           L+ DM  K
Sbjct: 559 LWDDMIRK 566



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 193/391 (49%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   ++ TYNTLIN  CR G    A  L    ++   E      P  +TY  I+ GLCK 
Sbjct: 287 GVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGME------PGLLTYNAILYGLCKI 340

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  D+AK++ ++M    + PN  TYN+L+   C  ++  EA+ +F EM  +GV P++VSF
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++  L +NG + +A      M + G+ P+  +Y  L+DGFC  G ++ A ++   M +
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460

Query: 194 MGCKHNVFSY-----------------------------------SILINGYCKNKEIEG 218
            GC  +V +Y                                   + LI GYCK+  ++ 
Sbjct: 461 RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDK 520

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL+L+  M+   +KPD V YNTL  G  +  ++ RA +L+D+M R  +  D  +Y T ++
Sbjct: 521 ALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLN 580

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G C +G + EA+ L   +       ++   N LI G C+SG +  A+E    +    +I 
Sbjct: 581 GFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP 640

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D  +YN +I     +  ++KA  L  +ME +
Sbjct: 641 DSFSYNTLIDGYLKEANLEKAFILINEMEKR 671



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 176/339 (51%), Gaps = 8/339 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A   F ++   G  P+   Y  LI+G CR G    AL + +EM A G       C  + 
Sbjct: 415 QALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG-------CFMDV 467

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T ++GLCK+     A  LF +M +  + P+  T+ +LI G+C   + ++A  LF  
Sbjct: 468 VTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   ++P+ V++N +++  CK G+M  A  L + MI+  + P+   Y T+++GFC +G 
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGL 587

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  L   M   G + N+ + + LI GYC++ ++  A    S+M+S GI PD   YNT
Sbjct: 588 LPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNT 647

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   +E+AF L +EM++ G+  +   Y   ++G C  G + EA ++ R +  + 
Sbjct: 648 LIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
              D   Y+ LI+G      +K A+     + +  L+ D
Sbjct: 708 INPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 133/274 (48%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           + Y+ L+  +  A    E    F  +  +GV  ++ + N ++  L + G +D A  +   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           +++ G+  N +  N +++  C   +          ME  G   ++ +Y+ LIN YC+   
Sbjct: 248 VVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGL 307

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +E A  L +   S+G++P ++ YN +  GL +I + +RA  +  EM + G+  +   Y T
Sbjct: 308 VEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNT 367

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            +  +C+   I+EA E+F  +       D+ +++ LI  L ++G L  A   FR + R  
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++ D V Y I+I   C +G +  A  +  +M A+
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLAR 461


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 122/369 (33%), Positives = 197/369 (53%), Gaps = 11/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA +  ++ + G  P+  TY  L+NGLC+ G    A +LF  +           KP  V
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----------KPEIV 354

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            + T+I G    G +D AK +   M     I P+V TYNSLI+G+        A  +  +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G +PNV S+ ++++  CK GK+DEA  +L  M   G++PN   +N L+  FC   R
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A E+F  M   GCK +V++++ LI+G C+  EI+ AL L  +M+S+G+  + V YNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L        +++ A KL +EM   G   D   Y + I GLC+ G + +A  LF  +    
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           +     + N LI+GLC+SG ++ A E  + +       D+VT+N +I+ LC  G+++   
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654

Query: 361 DLFLDMEAK 369
            +F  ++A+
Sbjct: 655 TMFRKLQAE 663



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/359 (33%), Positives = 191/359 (53%), Gaps = 11/359 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ + GC P+  T+N +I GLC+       +N   +M N     G    P+ +
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDR----INEAAKMVNRMLIRGFA--PDDI 323

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++GLCK G VD AK+LF ++      P +V +N+LIHGF      ++AK +  +M
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G+ P+V ++N ++    K G +  A  +L  M   G +PN + Y  L+DGFC  G+
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +   M + G K N   ++ LI+ +CK   I  A+ ++ EM  KG KPDV  +N+
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL E+ +++ A  L  +M   GV A+T  Y T I+   + G I EA +L   +    
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             LD   YN LI GLC++G +  A  LF  + R       ++ NI+I+ LC  G +++A
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 159/288 (55%), Gaps = 8/288 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A  +   +R  GC+PNV++Y  L++G C+ G    A N+  EM A+G        KPNTV
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG-------LKPNTV 460

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I   CKE  + +A E+F +M  +   P+V T+NSLI G C  ++   A  L  +M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV  N V++N ++N   + G++ EA +L+  M+  G   +   YN+L+ G C  G V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  LF  M   G   +  S +ILING C++  +E A+    EM+ +G  PD+V +N+L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
             GL    ++E    +F ++Q  G+  DT  + T +  LCK G++ +A
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 181/367 (49%), Gaps = 12/367 (3%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +   L +++R V+ CEP   +YN ++  L       VA N+F +M +          P  
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK------IPPTL 217

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  ++   C    +D A  L   M      PN V Y +LIH     N  NEA  L  E
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+  +FN ++  LCK  +++EA++++  M+  G  P+   Y  LM+G C  GR
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYN 239
           V+ A++LF  +     K  +  ++ LI+G+  +  ++ A ++ S+M+ S GI PDV  YN
Sbjct: 338 VDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  G ++   V  A ++  +M+  G   + ++Y   +DG CK G I EA  +   +   
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +   +NCLI   CK  R+  A E+FR +PR     DV T+N +I  LC   ++  A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513

Query: 360 RDLFLDM 366
             L  DM
Sbjct: 514 LWLLRDM 520



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 156/315 (49%), Gaps = 5/315 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P   +Y  +++ L        A  +F  M    I P + T+  ++  FC  N+ + A 
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M   G  PN V +  +++ L K  +++EA +LLE M  +G  P+A  +N ++ G 
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   R+N A ++   M   G   +  +Y  L+NG CK   ++ A  L+  +     KP++
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEI 353

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VI+NTL  G     +++ A  +  +M   +G+  D   Y + I G  K G +  A+E+  
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +R    + ++ +Y  L+DG CK G++  A+ +   +    L  + V +N +I A C + 
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473

Query: 355 KMDKARDLFLDMEAK 369
           ++ +A ++F +M  K
Sbjct: 474 RIPEAVEIFREMPRK 488



 Score =  137 bits (345), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 139/252 (55%), Gaps = 6/252 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++   GC+P+V+T+N+LI+GLC       AL L  +M +     GVV   NTV
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTV 530

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+   + G + +A++L  +M  +    + +TYNSLI G C A + ++A+ LF +M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+ +S N+++N LC++G ++EA    + M+  G  P+   +N+L++G C  GR+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                +F  +++ G   +  +++ L++  CK   +  A  L  E +  G  P+   ++ L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710

Query: 242 FIGLFEIHQVER 253
              +     ++R
Sbjct: 711 LQSIIPQETLDR 722



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 7/271 (2%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL-LELM 156
           Y  LI       ++     L I+M D+G+      F  IM +  K G   + +RL LE+ 
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNR-AEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                 P    YN +++   ++G  ++ A  +F  M S      +F++ +++  +C   E
Sbjct: 174 NVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ ALSL  +M   G  P+ VIY TL   L + ++V  A +L +EM   G   D   +  
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I GLCK   I EA ++   + I  +  D   Y  L++GLCK GR+  A +LF  +P+  
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              ++V +N +IH     G++D A+ +  DM
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 108/336 (32%), Positives = 179/336 (53%), Gaps = 6/336 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  LI   C       A+ L +EM          CKP+ VTY  +I+G+CKEG
Sbjct: 240 CYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKG------CKPDVVTYNVLINGICKEG 293

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A +    M      PNV+T+N ++   C    W +A+ L  +M+ +G  P+VV+FN
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++N LC+   +  A  +LE M + G  PN+  YN L+ GFC   +++RA E    M S 
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 413

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ L+   CK+ + + A+ + +++ SKG  P ++ YNT+  GL ++ + E A
Sbjct: 414 GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 473

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L +EM+R G+  D   Y T + GL   G + EA+++F  +  L  +     YN ++ G
Sbjct: 474 AELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLG 533

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           LCK+ +   A +    +          TY I+I  +
Sbjct: 534 LCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569



 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 192/387 (49%), Gaps = 44/387 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V    +LI G CR+G T  A  + E + N     G V  P+ +TY  +I G CK G +
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENS----GAV--PDVITYNVLIGGYCKSGEI 193

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA----------KC---------- 116
           DKA ++  +M   ++ P+VVTYN+++   C +    EA          +C          
Sbjct: 194 DKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTIL 250

Query: 117 ---------------LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
                          L  EM  +G +P+VV++NV++N +CK G++DEA + L  M   G 
Sbjct: 251 IEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGC 310

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
           +PN   +N ++   C TGR   AE L   M   GC  +V +++ILIN  C+ + +  A+ 
Sbjct: 311 QPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAID 370

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +  +M   G  P+ + YN L  G  +  +++RA +  + M   G   D   Y T +  LC
Sbjct: 371 VLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALC 430

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K+G    AVE+   L        +  YN +IDGL K G+ + A EL   + R  L  D++
Sbjct: 431 KDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDII 490

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEA 368
           TY+ ++  L  +GK+D+A  +F DME 
Sbjct: 491 TYSTLLRGLGCEGKVDEAIKIFHDMEG 517



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 181/353 (51%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNT++  LC +G    A+ + +            C P+ +TYT +I+  C +  V
Sbjct: 207 PDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRE------CYPDVITYTILIEATCNDSGV 260

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A +L  +M+ +   P+VVTYN LI+G C     +EA      M   G QPNV++ N+I
Sbjct: 261 GQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNII 320

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  +C  G+  +A RLL  M++ G  P+   +N L++  C    + RA ++   M   GC
Sbjct: 321 LRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGC 380

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N  SY+ L++G+C+ K+++ A+     M+S+G  PD+V YNTL   L +  + + A +
Sbjct: 381 MPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVE 440

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + +++   G +     Y T IDGL K G    A EL   +R    + DI  Y+ L+ GL 
Sbjct: 441 ILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLG 500

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             G++  A ++F  +    +    VTYN ++  LC   +  +A D    M  K
Sbjct: 501 CEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEK 553



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 149/290 (51%), Gaps = 3/290 (1%)

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           L + G +++  +   +M  +   P+V+   SLI GFC +    +A  +   + + G  P+
Sbjct: 117 LVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPD 176

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V+++NV++   CK+G++D+A ++LE M    V P+   YNT++   C +G++  A E+  
Sbjct: 177 VITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLD 233

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
                 C  +V +Y+ILI   C +  +  A+ L  EM  KG KPDVV YN L  G+ +  
Sbjct: 234 RQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 293

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +++ A K  + M  +G   +   +   +  +C  G  ++A  L   +        +  +N
Sbjct: 294 RLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFN 353

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            LI+ LC+   L  A ++   +P+   + + ++YN ++H  C + KMD+A
Sbjct: 354 ILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA 403



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 132/247 (53%), Gaps = 6/247 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   GC P+V T+N LIN LCR      A+++ E+M          C PN+
Sbjct: 331 MDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHG------CMPNS 384

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G C+E  +D+A E    M      P++VTYN+L+   C     + A  +  +
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK + A+ LLE M + G++P+   Y+TL+ G    G+
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A ++F  ME +  K +  +Y+ ++ G CK ++   A+   + M+ KG KP    Y  
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564

Query: 241 LFIGLFE 247
           L  G+ +
Sbjct: 565 LIEGIAD 571



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 128/233 (54%), Gaps = 3/233 (1%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+ + +L +NG+++E  + LE MI  G  P+     +L+ GFC +G+  +A  +   +E+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V +Y++LI GYCK+ EI+ AL +   M    + PDVV YNT+   L +  +++ 
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++ D   +     D   Y   I+  C +  + +A++L   +R    + D+  YN LI+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G+CK GRL  A +   ++P      +V+T+NI++ ++C+ G+   A  L  DM
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADM 340



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 82/169 (48%), Gaps = 3/169 (1%)

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           F+ +I +    +N E+E  L     M+ +G  PDV+   +L  G     +  +A ++ + 
Sbjct: 108 FASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEI 167

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           ++  G   D   Y   I G CK+G I +A+++   + +     D+  YN ++  LC SG+
Sbjct: 168 LENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAP---DVVTYNTILRSLCDSGK 224

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LK A E+     +     DV+TY I+I A C D  + +A  L  +M  K
Sbjct: 225 LKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKK 273


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 114/358 (31%), Positives = 187/358 (52%), Gaps = 8/358 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +V TY TLI+GLC++G    A  L ++MA+        C PN VTYT +IDGLCK 
Sbjct: 40  GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG------CAPNVVTYTALIDGLCKA 93

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVS 132
                A +   +M      P++VTYNSLIHG C AN  ++A  +  E+M + G  P+VV+
Sbjct: 94  RRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVT 153

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N  ++ LCK GK+D+   +LE M + G+ P+   + +++ G C   R++ A ++F  M 
Sbjct: 154 YNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGML 213

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC  +  +YSI+++   +   ++    +   M+  G       Y  L   L     +E
Sbjct: 214 ERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIE 273

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A   +++    G   + + +  FI  LC++G    A  +   +       ++ +YN +I
Sbjct: 274 SASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVI 333

Query: 313 DGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DGLCKSG +  AW+L R  L  G    DV+ +N +I   C  G++ +A+ L  +M+AK
Sbjct: 334 DGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAK 391



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 188/371 (50%), Gaps = 13/371 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A AL  K+   GC PNV TY  LI+GLC+      A+   + M          C+P+ VT
Sbjct: 64  AQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG------CEPDLVT 117

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENIN-PNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           Y ++I GLC    +D A  +  ++  E+   P+VVTYN+ I G C A   ++   +  EM
Sbjct: 118 YNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+VV+F  I++ LCK  ++D+A ++ + M++ G  P++  Y+ ++D      R+
Sbjct: 178 DRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 237

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  EE+   M   G      +Y+ LI+   +  +IE A   Y + +  G   +V  +N  
Sbjct: 238 DTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAF 297

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    +   A  +   M   G   +  +Y   IDGLCK+G + +A +L R  ++L  
Sbjct: 298 IGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSR--KMLDS 355

Query: 302 ---ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMD 357
              + D+  +N LI G CK+GRL  A +L + +  + + + DVVTYN MI      G + 
Sbjct: 356 GCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLK 415

Query: 358 KARDLFLDMEA 368
           +A+ L  +M+A
Sbjct: 416 QAKLLLEEMQA 426



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 136/275 (49%), Gaps = 1/275 (0%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M   +   +   YN+LI G C A     A  L   M   G   +VV++  +++ LCK+G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D A  LL+ M   G  PN   Y  L+DG C   R + A +    M   GC+ ++ +Y+ 
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 206 LINGYC-KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           LI+G C  N+  +  L L   M+  G  PDVV YNT   GL +  ++++  ++ +EM R 
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G++ D   + + I GLCK   I +A ++F+ +       D   Y+ ++D L ++ RL   
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            E+   + +    A   TY  +IHAL   G ++ A
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHALIRAGDIESA 275



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 133/286 (46%), Gaps = 43/286 (15%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNT I+GLC+ G     L + EEM  G         P+ VT+ +II GLCK   +
Sbjct: 149 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGG------ISPDVVTFCSIISGLCKANRI 202

Query: 77  DKAKELFLKMKDENINPNVVTYN-----------------------------------SL 101
           D A ++F  M +    P+ +TY+                                    L
Sbjct: 203 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPL 262

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           IH    A D   A   + + M+ G    V + N  +  LC++GK   A  +L  MI+ G 
Sbjct: 263 IHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGS 322

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC-KHNVFSYSILINGYCKNKEIEGAL 220
            PN   YN ++DG C +G V+ A +L   M   GC K +V  ++ LI+G+CK   +  A 
Sbjct: 323 LPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQ 382

Query: 221 SLYSEMLSKGI-KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            L  EM +K I  PDVV YNT+  G  +   +++A  L +EMQ  G
Sbjct: 383 QLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 121/231 (52%), Gaps = 8/231 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   GC P+  TY+ +++ L R         + E M   +G + +     + 
Sbjct: 204 DAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVK-SGHYAL-----SA 257

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  L + G ++ A   + +  +      V T+N+ I   C +  +  AK + + M
Sbjct: 258 TYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGM 317

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
           ++ G  PN++S+N +++ LCK+G +D+A +L   M+  G  +P+   +NTL+ GFC  GR
Sbjct: 318 IESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGR 377

Query: 181 VNRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++A++L   M++   C  +V +Y+ +I+G  K   ++ A  L  EM + G
Sbjct: 378 LSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/66 (39%), Positives = 34/66 (51%)

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           + LD   YN LI GLCK+ + + A EL   +      A VVTY  +I  LC  G +D A+
Sbjct: 6   FRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQ 65

Query: 361 DLFLDM 366
            L   M
Sbjct: 66  ALLQKM 71


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 125/395 (31%), Positives = 196/395 (49%), Gaps = 29/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  +  +++  G  P+V+TY+ LI+G C+ G     L L EEM   N E  +V      
Sbjct: 343 EALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLF 402

Query: 56  ---CKP--------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                     +   Y+ +I G C +G +D A +L  +M   N+ 
Sbjct: 403 HGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLA 462

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+   + SL+HGFC    W  A   F  M++ G+ P++ + NVI++  C+ G+++EA  L
Sbjct: 463 PDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNL 522

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M   G+ PN F YN +++  C   +  RA ELF  M       +V  YS LI+G+ K
Sbjct: 523 MNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAK 582

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               + AL LY+ ML  G+ PD+V Y  L   L    ++  A+ LF +M  +G+  D  +
Sbjct: 583 QSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKIS 642

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + I G C+ G + +A  LF  +    +   +  Y  L+DG CK  R+ IA  L   + 
Sbjct: 643 YTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMK 702

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           R  +  DVVTYN++I A    G +DKA ++  +M+
Sbjct: 703 RKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMK 737



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 198/438 (45%), Gaps = 76/438 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   G  P V TY+T I GLCR G+   AL+    + + NG   V C     
Sbjct: 273 QATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYC----- 327

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  II GLCK+G +D+A ++  +MK   I+P+V TY+ LIHGFC   D  +   L  EM
Sbjct: 328 -YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEM 386

Query: 122 MDQGVQPNVVSFNVIMNELCK-----------------------------------NGKM 146
               ++P++VS++ + + LCK                                    G +
Sbjct: 387 KYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDL 446

Query: 147 DEASRLLE-----------------------------------LMIQIGVRPNAFVYNTL 171
           D A +L+E                                   +M++ G+ P+    N +
Sbjct: 447 DSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C  GRV  A  L   M++ G   N+F+Y+ +IN  CK ++ E AL L+  ML + +
Sbjct: 507 IDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNV 566

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P VV+Y+TL  G  +    ++A  L+  M + GV  D  AY   I+ LC    + EA  
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYN 626

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LF+ +       D  +Y  +I G C+ G ++ AW LF  + +   +  VVTY  ++   C
Sbjct: 627 LFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYC 686

Query: 352 ADGKMDKARDLFLDMEAK 369
              ++D A  L  +M+ K
Sbjct: 687 KMNRIDIADMLIDEMKRK 704



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 190/403 (47%), Gaps = 47/403 (11%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTG------HTIVALNLFEEMANGNGEFGVVCKP 58
           +LF +++  G  PNVFTY  ++N  C+         T  A  + EEM   NGE      P
Sbjct: 235 SLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMER-NGE-----SP 288

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
             VTY+T I GLC+ G+V+ A +    +   N   NV  YN++IHG C   + +EA  + 
Sbjct: 289 TVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVL 348

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G+ P+V +++++++  CK G +++   L+E M    + P+   Y++L  G C  
Sbjct: 349 EEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKK 408

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
              + + ++F  + + G K++  +YSILI G+C   +++ A  L  EM+   + PD   +
Sbjct: 409 RLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNF 468

Query: 239 NTLFIG-------------------------------LFEIH----QVERAFKLFDEMQR 263
            +L  G                               + + H    +VE A  L +EMQ 
Sbjct: 469 ESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQT 528

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+  + + Y   I+ LCK      A+ELF  +        +  Y+ LIDG  K    + 
Sbjct: 529 QGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQK 588

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A  L+  + +  +  D+V Y I+I+ LC   +M +A +LF  M
Sbjct: 589 ALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKM 631



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 142/260 (54%), Gaps = 6/260 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P++ T N +I+  CR G    ALNL  EM    G F     PN  TY  +I+ LCKE
Sbjct: 495 GILPSIATCNVIIDAHCREGRVEEALNLMNEMQT-QGIF-----PNLFTYNAVINRLCKE 548

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              ++A ELF  M   N+ P+VV Y++LI GF   ++  +A  L+  M+  GV P++V++
Sbjct: 549 RKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAY 608

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            +++N LC   +M EA  L + M + G+ P+   Y +++ GFC  G + +A  LF  M  
Sbjct: 609 TILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQ 668

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    V +Y+ L++GYCK   I+ A  L  EM  KGI PDVV YN L         +++
Sbjct: 669 RGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDK 728

Query: 254 AFKLFDEMQRHGVAADTWAY 273
           A ++ +EM+ +GV  D   Y
Sbjct: 729 ALEMLNEMKENGVLPDHMTY 748



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 179/367 (48%), Gaps = 12/367 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F++ +  G E +  + N L+  L          +LFEEM +          PN  T
Sbjct: 198 AVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEEMKSTGP------PPNVFT 251

Query: 63  YTTIIDGLCKEGF------VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           YT +++  CK  F        +A E+  +M+    +P VVTY++ I+G C       A  
Sbjct: 252 YTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALD 311

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
               ++      NV  +N I++ LCK G++DEA ++LE M   G+ P+ + Y+ L+ GFC
Sbjct: 312 FVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFC 371

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G V +   L   M+    + ++ SYS L +G CK +  + +L ++ ++ + G K D  
Sbjct: 372 KQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQT 431

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y+ L  G      ++ A KL +EM R+ +A D   + + + G CK G  V A+E F  +
Sbjct: 432 AYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMM 491

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                   I   N +ID  C+ GR++ A  L   +    +  ++ TYN +I+ LC + K 
Sbjct: 492 LEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKS 551

Query: 357 DKARDLF 363
           ++A +LF
Sbjct: 552 ERALELF 558



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/296 (28%), Positives = 148/296 (50%), Gaps = 6/296 (2%)

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYAN------DWNEAKCLFIEMMDQGVQPNVVSF 133
           + LF +MK     PNV TY  +++ +C  N      D  +A  +  EM   G  P VV++
Sbjct: 234 RSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTY 293

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +  +  LC+ G ++ A   +  +I      N + YN ++ G C  G ++ A ++   M+S
Sbjct: 294 STYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKS 353

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V++YSILI+G+CK  ++E  L L  EM    ++P +V Y++LF GL +    + 
Sbjct: 354 CGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDI 413

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           +  +F ++   G   D  AY   I G C  G +  A +L   +       D   +  L+ 
Sbjct: 414 SLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVH 473

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G CK G    A E F  +  G ++  + T N++I A C +G++++A +L  +M+ +
Sbjct: 474 GFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQ 529



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 146/311 (46%), Gaps = 6/311 (1%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           + + +  +I        ++ A ++FL+ K   +  +  + N L+     AN     + LF
Sbjct: 178 SVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLF 237

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKN--GKMD----EASRLLELMIQIGVRPNAFVYNTLM 172
            EM   G  PNV ++ ++MN  CK   G+ D    +A+ +LE M + G  P    Y+T +
Sbjct: 238 EEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYI 297

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G C  G V  A +   S+ S     NV+ Y+ +I+G CK  E++ AL +  EM S GI 
Sbjct: 298 YGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGIS 357

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PDV  Y+ L  G  +   VE+   L +EM+   +     +Y +   GLCK      ++++
Sbjct: 358 PDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDI 417

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           FR L    Y+ D  AY+ LI G C  G L  A +L   + R  L  D   +  ++H  C 
Sbjct: 418 FRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCK 477

Query: 353 DGKMDKARDLF 363
            G    A + F
Sbjct: 478 MGLWVNALEFF 488


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/371 (35%), Positives = 191/371 (51%), Gaps = 9/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF ++   G  P+V T+  +I+GLC++G+   A   FEEM  G       CKPN V
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG------CKPNVV 401

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTTII GL K G V  A  +   M      P+ VTY  L+ GFC     +EA  L  E+
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEA-SRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                 PN+  ++ ++N LC  G +++    L E         +  +  +++ G C TGR
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGR 521

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE--IEGALSLYSEMLSKGIKPDVVIY 238
           ++ A  +F  M S GCK +  +Y+ILING C+++E  +E A +L  ++   G  PD V Y
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTY 581

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L IGL +I +V+RA K+ +E    G  AD  AY     GLC  G +  AV LF+ +  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D  AY C+I+GL K  +L+ A + F  +        V TY  ++ ALC  G +D+
Sbjct: 642 QGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701

Query: 359 ARDLFLDMEAK 369
           A   F  M A+
Sbjct: 702 AFHRFESMLAR 712



 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/441 (29%), Positives = 194/441 (43%), Gaps = 79/441 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++   G  P+   YNT+I+GL + GH   AL + + M          C P  V
Sbjct: 243 EAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM------LAKACVPTEV 296

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++ LCK G +++A+ELF  M      PN V Y SLIHGF  +    EA  LF EM
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT----------- 170
           ++ G +P+V++  V+++ LCK+G  ++A++  E M++ G +PN   Y T           
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416

Query: 171 ------------------------LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                   L+DGFC  GR++ A +L   ++      N+  YS L
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476

Query: 207 INGYCKNKEIEGALS------------------------------------LYSEMLSKG 230
           +NG C    +E  L                                     ++  M+S+G
Sbjct: 477 VNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536

Query: 231 IKPDVVIYNTLFIGLFEIHQ--VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            KPD   YN L  GL    +  VERAF L  ++++ G   D   Y     GLCK G +  
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           AV++        +  D+ AY  L  GLC  G++  A  LF+ + R     D   Y  +I+
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656

Query: 349 ALCADGKMDKARDLFLDMEAK 369
            L    K++ A   F +M  K
Sbjct: 657 GLIKVKKLEDACKFFDEMIGK 677



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 197/404 (48%), Gaps = 43/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  ++   C+P++ T+  L++ LC+ G    A  +F EM       G V  P+  
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM----AMGFV-PPDRA 226

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +T ++  L K   V +A+E+F +M+     P+ + YN++I G   A    EA  +   M
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P  V++ +++N LCK G ++ A  L  +M   G RPN+ +Y +L+ GF  +GR+
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G + +V +++++I+G CK+   E A   + EM+  G KP+VV Y T+
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +I +V  AF++   M  HG   D+  Y   +DG CK G + EA +L   L     
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466

Query: 302 ELDIRAYNCLID------------------------------------GLCKSGRLKIAW 325
             +++ Y+ L++                                    GLCK+GRL  A 
Sbjct: 467 SPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEAC 526

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALC--ADGKMDKARDLFLDME 367
            +F+ +       D  TYNI+I+ LC   + ++++A  L  D+E
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 198/408 (48%), Gaps = 49/408 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +AA  F ++   GC+PNV TY T+I GL + G    A  + + M A+G       C P++
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG-------CFPDS 435

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND---------- 110
           VTY  ++DG CK G +D+A +L  ++   + +PN+  Y+SL++G C              
Sbjct: 436 VTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFE 495

Query: 111 --------------------------WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN- 143
                                      +EA  +F  M+ +G +P+  ++N+++N LC++ 
Sbjct: 496 QSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSR 555

Query: 144 -GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
             +++ A  LL  + ++G  P+A  Y  L  G C  G V+RA ++     S G   +V +
Sbjct: 556 ENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVA 615

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ L  G C   +++ A+SL+ EM+ +G  PD   Y  +  GL ++ ++E A K FDEM 
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMI 675

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKSGR 320
             G       Y   +  LC  G + EA   F ++ + + EL   +  Y+ LI G CK+ +
Sbjct: 676 GKGQKPTVATYTALVQALCHAGNVDEAFHRFESM-LARGELVGSVMIYDALIHGFCKALK 734

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +  A +LF  +     +   VT   +   L   GK +KA++L  +M A
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA 782



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 146/285 (51%), Gaps = 9/285 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIV--ALNLFEEMANGNGEFGVVCKPN 59
           EA  +F ++   GC+P+  TYN LINGLCR+    V  A  L  ++        V   P+
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEK------VGYLPD 577

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTYT +  GLCK G VD+A ++  +      N +VV Y +L  G CY    + A  LF 
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ QG  P+  ++  I+N L K  K+++A +  + MI  G +P    Y  L+   C  G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 180 RVNRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            V+ A   F SM + G    +V  Y  LI+G+CK  +++ AL L+ +M+S+G  P  V  
Sbjct: 698 NVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +LF GL    + E+A +L  EM   G       +   +DGL K+
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +VFTYN L+N L    +      + EEM       G+   PNT ++  +I    + 
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA----GIA--PNTFSFNILIRSFART 167

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVS 132
              D A   F  MK +   P++ T+  L+   C A    +A  +F EMM  G V P+   
Sbjct: 168 RRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRAL 227

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
              ++  L K  ++ EA  +   M + G  P+A  YNT++DG    G    A ++  +M 
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           +  C     +Y IL+N  CK   +E A  L+  M + G +P+ VIY +L  G  +  +++
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  LFDEM   G   D   +   IDGLCK+G   +A + F  +     + ++  Y  +I
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            GL K GR+  A+ + + +       D VTY  ++   C  G++D+A  L  +++
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 7/213 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +V  Y  L  GLC  G    A++LF+EM    G       P+   Y  II+GL K 
Sbjct: 608 GWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG------APDAAAYCCIINGLIKV 661

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVS 132
             ++ A + F +M  +   P V TY +L+   C+A + +EA   F  M+ +G +  +V+ 
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMI 721

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ +++  CK  K+D A +L E MI  G  P A    +L DG   +G+  +A+EL   M 
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           + G   +  +++ +++G  K+ E    L L  E
Sbjct: 782 AGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 1/212 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G + + F YN LM+        ++   +   M   G   N FS++ILI  + + +  +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTF 276
            A++ +  M  K  KPD+  +  L   L +    E+AF++F EM   G V  D   +   
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +  L K   + EA E+F  +    +  D  AYN +IDGL K+G  + A ++  ++     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +   VTY I++++LC  G +++A +LF  M A
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 191/361 (52%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L   L  FG  PNV  Y TLI+G C+ G+ ++A NLF +M       G+V  PN  TY+ 
Sbjct: 180 LLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKM----DRLGLV--PNPHTYSV 233

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++G  K+G   +  +++  MK   I PN   YN LI  +C     ++A  +F EM ++G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKG 293

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +   V+++N+++  LC+  K  EA +L+  + ++G+ PN   YN L++GFC  G+++ A 
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF  ++S G    + +Y+ LI GY K + + GAL L  EM  + I P  V Y  L    
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             ++  E+A ++   M++ G+  D + Y   I GLC +G + EA +LF++L  +  + + 
Sbjct: 414 ARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNS 473

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I G CK G    A  L   +    ++ +V ++   I  LC D K  +A  L   
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQ 533

Query: 366 M 366
           M
Sbjct: 534 M 534



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           + +++  +I G C  G+ +    L   +     EFG+   PN V YTT+IDG CK G V 
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLE----EFGL--SPNVVIYTTLIDGCCKYGNVM 210

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            AK LF KM    + PN  TY+ L++GF       E   ++  M   G+ PN  ++N ++
Sbjct: 211 LAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +E C  G +D+A ++   M + G+      YN L+ G C   +   A +L   +  +G  
Sbjct: 271 SEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ILING+C   +++ A+ L++++ S G+ P +V YNTL  G  ++  +  A  L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+   +A     Y   ID   +  Y  +A E+   +       D+  Y+ LI GLC 
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCV 450

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G +K A +LF+SL    L  + V YN MIH  C +G   +A  L  +M
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 166/353 (47%), Gaps = 7/353 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A  LF K+   G  PN  TY+ L+NG  + G       ++E M       G+V  PN 
Sbjct: 210 MLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS----GIV--PNA 263

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  +I   C  G VDKA ++F +M+++ I   V+TYN LI G C    + EA  L  +
Sbjct: 264 YAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G+ PN+V++N+++N  C  GKMD A RL   +   G+ P    YNTL+ G+     
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   ME      +  +Y+ILI+ + +    E A  ++S M   G+ PDV  Y+ 
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL     ++ A KLF  +    +  ++  Y T I G CK G    A+ L   +    
Sbjct: 444 LIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSG 503

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
              ++ ++   I  LC+  + K A  L   +    L   V  Y  M+H +  D
Sbjct: 504 MVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK-MVHKVKGD 555



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 149/314 (47%), Gaps = 1/314 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C   T  Y TI++        D+A      M  E   P   T+N+L+     +N +++A 
Sbjct: 85  CLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAW 144

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +F E+  + V  +  SF +++   C+ G   +  RLL ++ + G+ PN  +Y TL+DG 
Sbjct: 145 WIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G V  A+ LF  M+ +G   N  +YS+L+NG+ K         +Y  M   GI P+ 
Sbjct: 204 CKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             YN L         V++AFK+F EM+  G+A     Y   I GLC+     EAV+L   
Sbjct: 264 YAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +    +I  YN LI+G C  G++  A  LF  L    L   +VTYN +I        
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 356 MDKARDLFLDMEAK 369
           +  A DL  +ME +
Sbjct: 384 LAGALDLVKEMEER 397



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 169/377 (44%), Gaps = 42/377 (11%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y+T++N    +  T  AL     M +  G       P + T+  ++  L +  + DKA  
Sbjct: 92  YDTIVNAYVHSHSTDQALTFLHHMIH-EGHV-----PLSNTFNNLMCLLIRSNYFDKAWW 145

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +F ++K + +  +  ++  +I G C A  + +   L   + + G+ PNVV +  +++  C
Sbjct: 146 IFNELKSKVV-LDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCC 204

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G +  A  L   M ++G+ PN   Y+ LM+GF   G      +++ +M+  G   N +
Sbjct: 205 KYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAY 264

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+ YC    ++ A  +++EM  KGI   V+ YN L  GL    +   A KL  ++
Sbjct: 265 AYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            + G++ +   Y   I+G C  G +  AV LF  L+       +  YN LI G  K   L
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENL 384

Query: 322 KIAWELFRSL------PRGV-----------------------------LIADVVTYNIM 346
             A +L + +      P  V                             L+ DV TY+++
Sbjct: 385 AGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVL 444

Query: 347 IHALCADGKMDKARDLF 363
           IH LC  G M +A  LF
Sbjct: 445 IHGLCVHGNMKEASKLF 461



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 132/343 (38%), Gaps = 85/343 (24%)

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL----------ELMIQIG- 160
            +A  LF     QG+Q    S + I+N L  +G + +A  L+           LM+Q+  
Sbjct: 20  TKALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQ 79

Query: 161 --VRP------------NAFVY-----------------------NTLMDGFCLTGRVNR 183
               P            NA+V+                       NT  +  CL  R N 
Sbjct: 80  AHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNY 139

Query: 184 AEELFVSMESMGCK--HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            ++ +     +  K   + +S+ I+I G C+         L + +   G+ P+VVIY TL
Sbjct: 140 FDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTL 199

Query: 242 FI-----------------------------------GLFEIHQVERAFKLFDEMQRHGV 266
                                                G F+       F++++ M+R G+
Sbjct: 200 IDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGI 259

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             + +AY   I   C  G + +A ++F  +R       +  YN LI GLC+  +   A +
Sbjct: 260 VPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVK 319

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   + +  L  ++VTYNI+I+  C  GKMD A  LF  +++ 
Sbjct: 320 LVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSS 362


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 194/356 (54%), Gaps = 7/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GCE +   Y T+I G     H + A  LFEEM       G+   P+ + +  +I  LC++
Sbjct: 176 GCESSAVAYCTVIGGFYEENHRVEAHELFEEM------LGLGICPDIMAFNKLIHTLCRK 229

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +++ L  K+    ++PN+ T N  I GFC     NEA  L ++ + +G+ P+V+++
Sbjct: 230 GHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRL-LDGVGRGLTPDVITY 288

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LCKN K+ EA   L  M+  G  P+ F YN+++DG+C  G +  A+++      
Sbjct: 289 NTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAF 348

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y  LING C++ +I+ A+++++E + KG+KP++V+ NTL  GL +   + +
Sbjct: 349 KGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQ 408

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KL +EM  +G + D W Y   I+GLCK G + +A  L        +  D+  +N LID
Sbjct: 409 ALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLID 468

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G CK  +L  A E+   +    +  DV+TYN +++ LC  GK +     F  M  K
Sbjct: 469 GYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEK 524



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 182/354 (51%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYNTLI GLC+    + A +   +M N   E      P+  TY +IIDG CK 
Sbjct: 280 GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYE------PDGFTYNSIIDGYCKL 333

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A ++      +   P+  TY SLI+G C   D + A  +F E M++G++PN+V  
Sbjct: 334 GMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLC 393

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  L + G + +A +L+  M + G  P+ + YN +++G C  G V+ A+ L +   +
Sbjct: 394 NTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIA 453

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +VF+++ LI+GYCK  +++ A+ +   M + G+ PDV+ YN++  GL +  + E 
Sbjct: 454 KGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYED 513

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
               F  M   G   +   Y    +  CK   + EA+ L   ++      D+  +  L+ 
Sbjct: 514 VMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMK 573

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVV-TYNIMIHALCADGKMDKARDLFLDM 366
           G C +G L  A++LF+ +      +  + TYNIMI+A      M+ A  LF  M
Sbjct: 574 GFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKM 627



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 188/366 (51%), Gaps = 9/366 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPN 59
           +EA     K+   G EP+ FTYN++I+G C+ G    A  +  +     G F G V  P+
Sbjct: 302 VEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRD-----GAFKGFV--PD 354

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY ++I+GLC++G +D+A  +F +  ++ + PN+V  N+L+ G        +A  L  
Sbjct: 355 ESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMN 414

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM + G  P++ ++N+++N LCK G + +A  L+   I  G  P+ F +NTL+DG+C   
Sbjct: 415 EMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKL 474

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +++ A E+   M + G   +V +Y+ ++NG CK  + E  +  +  M+ KG  P+++ YN
Sbjct: 475 KLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYN 534

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRI 298
            L     +  +VE A  L +EMQ  G+  D   + T + G C NG +  A +LF R    
Sbjct: 535 ILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQ 594

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            K+   I  YN +I+       + +A +LF  +       D  TY +MI   C  G ++ 
Sbjct: 595 YKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINS 654

Query: 359 ARDLFL 364
                L
Sbjct: 655 GYSFLL 660



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 181/347 (52%), Gaps = 7/347 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TY +LINGLC+ G    A+N+F E      E G+  KPN V   T++ GL ++
Sbjct: 350 GFVPDESTYCSLINGLCQDGDIDRAINVFNEAM----EKGL--KPNLVLCNTLVKGLSQQ 403

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A +L  +M +   +P++ TYN +I+G C     ++A  L I+ + +G  P+V +F
Sbjct: 404 GLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTF 463

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK  K+D A  +++ M   GV P+   YN++++G C  G+       F  M  
Sbjct: 464 NTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME 523

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  N+ +Y+IL   +CK +++E AL+L  EM +KG+ PDVV + TL  G  +   ++ 
Sbjct: 524 KGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDG 583

Query: 254 AFKLFDEMQRHGVAADTWA-YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           A++LF  +      + T A Y   I+       +  A +LF  +    +  D   Y  +I
Sbjct: 584 AYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMI 643

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           DG CK+G +   +          LI  + T+  +++ LC   ++ +A
Sbjct: 644 DGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEA 690



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 156/336 (46%), Gaps = 56/336 (16%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPN 59
           ++A  L  ++   GC P+++TYN +INGLC+ G    A NL  + +A G+        P+
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGH-------LPD 459

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T+ T+IDG CK+  +D A E+  +M +  ++P+V+TYNS+++G C A  + +    F 
Sbjct: 460 VFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFK 519

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            MM++G  PN++++N++    CK  K++EA  L+E M   G+ P+   + TLM GFC  G
Sbjct: 520 LMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNG 579

Query: 180 ------------------------------------RVNRAEELFVSMESMGCKHNVFSY 203
                                                +N AE+LF  M   G   + ++Y
Sbjct: 580 DLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTY 639

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
            ++I+G+CK   I    S     + KG+ P +  +  +   L    +V  A  +   M  
Sbjct: 640 RVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVH 699

Query: 264 HGVAA------------DTWAYRTFIDGLCKNGYIV 287
            G+              +  A +  ++ L K G+I 
Sbjct: 700 KGIVPEVVNTIFEADKKEVAAPKIVVENLMKKGHIT 735



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 101/363 (27%), Positives = 163/363 (44%), Gaps = 44/363 (12%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV- 96
           AL +F  +   +G      K   +TY  +I+ L   G  +  +E+  + +  NI+  ++ 
Sbjct: 23  ALEIFNSVKKEDG-----FKHTLLTYKGMIEKLGFHGEFEAMEEVLAETR-MNIDNGLLE 76

Query: 97  -TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
             Y   +  +       EA  +F  M     +P+V S+N IMN L +    D+A ++   
Sbjct: 77  GVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMR 136

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING-YCKNK 214
           M   G+ P+ + +   M  FC T R + A  L  +M S GC+ +  +Y  +I G Y +N 
Sbjct: 137 MRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENH 196

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA------- 267
            +E A  L+ EML  GI PD++ +N L   L     V+ + +L +++ + GV+       
Sbjct: 197 RVE-AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVN 255

Query: 268 ---------------------------ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                                       D   Y T I GLCKN  +VEA    R +    
Sbjct: 256 IFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEG 315

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           YE D   YN +IDG CK G ++ A ++ R       + D  TY  +I+ LC DG +D+A 
Sbjct: 316 YEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAI 375

Query: 361 DLF 363
           ++F
Sbjct: 376 NVF 378


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 195/365 (53%), Gaps = 12/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L M ++  G  PN  TYN L+ G C+ G    A N+ E M   N        P+  
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN------LLPDVW 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLC EG +++A +L  +M++  + P+VV+YN+LI+G    +  +EA  L  EM
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+PN V+ N+++   CK GKMD+AS  +  M + G  P+   YNTL++G+C  G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 182 NRAEELFVSMESMGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
             A   F +M+ MG K+   +  + + ++   C+ K++E A  L S    +G   D V Y
Sbjct: 435 GEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL +G F+   V+RA KL+DEM+   +   T  Y   I GLC+ G   +A+     L  
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D   YN ++ G C+ G ++ A++    +       DV T NI++  LC +G ++K
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEK 611

Query: 359 ARDLF 363
           A  LF
Sbjct: 612 ALKLF 616



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 183/353 (51%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V +YNTLING         A  L EEM+    E GV  KPN VT+  ++   CKEG +
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGKM 399

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A     KM++   +P+ VTYN+LI+G+C A +  EA     EM  + ++ + V+ N I
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC+  K++EA +LL    + G   +   Y TL+ G+   G V+RA +L+  M+    
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +Y+ +I G C+  + E A+S  +E+L  G+ PD   YNT+  G      VE+AF+
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             ++M  +    D +     + GLC  G + +A++LF T       +D   YN LI  LC
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K GRL  A+ L   +    L  D  TYN +I AL   G++ +A +    M  K
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEK 692



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 182/348 (52%), Gaps = 8/348 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  PNV T+N +I G C       A+     M   N      C P+ VTY TI+D LCK
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN------CSPDNVTYNTILDALCK 255

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVV 131
           +G +  A++L + MK   + PN  TYN L++G+C    W +     IE+M Q  + P+V 
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMG-WLKEAANVIELMTQNNLLPDVW 314

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++N+++N LC  G+++EA +L + M  + + P+   YNTL++G     +++ A +L   M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G K N  +++I++  YCK  +++ A +  ++M   G  PD V YNTL  G  +   +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             AF+  DEM R  +  D+    T +  LC+   + EA +L  + R   Y +D  +Y  L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           I G  K G +  A +L+  +    +I   VTYN +I  LC  GK ++A
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 189/369 (51%), Gaps = 7/369 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCR--TGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           A  +F K++     PN+ T NTL+N L R  + H++   +   E  N   + G+V  PN 
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV---SFSREAFNDAIKLGIV--PNV 208

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  +I G C E     A E    M   N +P+ VTYN+++   C      +A+ L ++
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMD 268

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN  ++N+++   CK G + EA+ ++ELM Q  + P+ + YN L++G C  GR
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   ME++    +V SY+ LING  +  +I  A  L  EM  KG+KP+ V +N 
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +     +  +++ A     +M+  G + D   Y T I+G CK G + EA      +    
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            ++D    N ++  LC+  +L+ A++L  S  +     D V+Y  +I     DG +D+A 
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508

Query: 361 DLFLDMEAK 369
            L+ +M+ K
Sbjct: 509 KLWDEMKEK 517



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 153/347 (44%), Gaps = 38/347 (10%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL------------- 101
           +  P+     T I    + G    A ++F KMK   + PN++T N+L             
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189

Query: 102 -------------------------IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
                                    I+G+C  N + +A      M      P+ V++N I
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK G++ +A  LL  M   G+ PN   YN L+ G+C  G +  A  +   M     
Sbjct: 250 LDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V++Y++LING C    IE A  L  EM +  + PDVV YNTL  G  E  ++  AFK
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L +EM   GV  +   +   +   CK G + +A      +    +  D   YN LI+G C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K+G +  A+     + R  +  D VT N ++  LC + K+++A  L 
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/368 (26%), Positives = 166/368 (45%), Gaps = 52/368 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A+    K+   G  P+  TYNTLING C+ G+   A    +EM   N +   V      
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTIL 460

Query: 56  ---CKP--------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              C+                     + V+Y T+I G  K+G VD+A +L+ +MK++ I 
Sbjct: 461 RTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEII 520

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ VTYN +I G C      +A     E+++ G+ P+  ++N I++  C+ G +++A + 
Sbjct: 521 PSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQF 580

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M++   +P+ F  N L+ G C+ G + +A +LF +  S G   +  +Y+ LI   CK
Sbjct: 581 HNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG------- 265
              ++ A +L SEM  K + PD   YN +   L +  ++  A +   +M   G       
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQVL 700

Query: 266 ----------------VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
                             + + AY  +I  LC  G   +A+ +F   +     +D   Y 
Sbjct: 701 QLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYI 760

Query: 310 CLIDGLCK 317
            L+DGL K
Sbjct: 761 NLMDGLIK 768


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 184/351 (52%), Gaps = 6/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TYNT+I G C  G    AL++  EM    G       PN  TY T+I G CK G V
Sbjct: 70  PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRV 124

Query: 77  DKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           D+A ++F +M  +  + P  V YN+LI G+C     + A      M+++GV   V ++N+
Sbjct: 125 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 184

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L  +G+  EA  L+E M   G+ P+ F YN L++G C  G V +A E+F +M   G
Sbjct: 185 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 244

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            +  V +Y+ LI    K  +++    L+ E + +GI+PD+V+YN L         ++RAF
Sbjct: 245 VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 304

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+  YN LI G 
Sbjct: 305 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGY 364

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              G +K A  +   +        ++TYN +I  LC +G+ D A ++  +M
Sbjct: 365 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 415



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 178/362 (49%), Gaps = 18/362 (4%)

Query: 3   AAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           A ALF    +LR+  C     T+N ++  LC  G    AL L  +M           +PN
Sbjct: 25  AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 71

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            VTY T+I G C  G V  A ++  +M++   I PN  TY ++I G+C     +EA  +F
Sbjct: 72  AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 131

Query: 119 IEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            EM+ +G V+P  V +N ++   C  GK+D A    + M++ GV      YN L+    +
Sbjct: 132 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 191

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR   A EL   M   G   +VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 192 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 251

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y +L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 252 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 311

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D   YN L+ GLC  GR+  A +L   + +  +  D+VTYN +I      G + 
Sbjct: 312 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 371

Query: 358 KA 359
            A
Sbjct: 372 DA 373



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 137/244 (56%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+VFTYN LING C+ G+   AL +FE M+      GV  +   V
Sbjct: 197 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS----RRGV--RATVV 250

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I  L K+G V +  +LF +     I P++V YN+LI+    + + + A  +  EM
Sbjct: 251 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 310

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ V++N +M  LC  G++DEA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 311 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 370

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI PD   Y +L
Sbjct: 371 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 430

Query: 242 FIGL 245
             GL
Sbjct: 431 IEGL 434



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 138/264 (52%), Gaps = 6/264 (2%)

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           +H    A     A  LF +M    +     +FN+++  LC  GK    +R LEL+ Q+  
Sbjct: 13  LHPLLSALPSAPAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK---PARALELLRQM-P 68

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           RPNA  YNT++ GFC  GRV  A ++   M E  G   N ++Y  +I+G+CK   ++ A+
Sbjct: 69  RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAV 128

Query: 221 SLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
            ++ EML+KG +KP+ V+YN L  G  +  +++ A    D M   GVA     Y   +  
Sbjct: 129 KVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHA 188

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           L  +G   EA EL   +       D+  YN LI+G CK G +K A E+F ++ R  + A 
Sbjct: 189 LFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRAT 248

Query: 340 VVTYNIMIHALCADGKMDKARDLF 363
           VVTY  +I+AL   G++ +   LF
Sbjct: 249 VVTYTSLIYALSKKGQVQETDKLF 272



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 6/277 (2%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL- 153
             T+N ++   C A     A    +E++ Q  +PN V++N ++   C  G++  A  ++ 
Sbjct: 41  TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+   V  YN L   LF   +   A++L +EM   G+A D + 
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+G CK G + +A+E+F  +        +  Y  LI  L K G+++   +LF    
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R  +  D+V YN +I++    G +D+A ++  +ME K
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 313



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 4/81 (4%)

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  LF  +  L+  L    +N ++  LC +G+   A EL R +PR     + VTYN +I 
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80

Query: 349 ALCADGKMDKARDLFLDMEAK 369
             C+ G++  A D+  +M  +
Sbjct: 81  GFCSRGRVQAALDIMREMRER 101


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/368 (32%), Positives = 185/368 (50%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNT 60
           EA     +++  G E ++  Y +LI G C  G       LF+E +  G+        P  
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCA 282

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+I G CK G + +A E+F  M +  + PNV TY  LI G C      EA  L   
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++  +PN V++N+I+N+LCK+G + +A  ++ELM +   RP+   YN L+ G C  G 
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402

Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           ++ A +L   M  +S     +V SY+ LI+G CK   +  AL +Y  ++ K    D V  
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L     +   V +A +L+ ++    +  ++  Y   IDG CK G +  A  L   +R+
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            + +  +  YNCL+  LCK G L  AW LF  + R     DVV++NIMI      G +  
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 359 ARDLFLDM 366
           A  L + M
Sbjct: 583 AESLLVGM 590



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 193/403 (47%), Gaps = 43/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  ++R     P+VF+YNT+I G C       AL L  EM  G+G     C  + V
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLV 213

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID  CK G +D+A     +MK   +  ++V Y SLI GFC   + +  K LF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P  +++N ++   CK G++ EAS + E MI+ GVRPN + Y  L+DG C  G+ 
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M     + N  +Y+I+IN  CK+  +  A+ +   M  +  +PD + YN L
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKN---------------- 283
             GL     ++ A KL   M +       D  +Y   I GLCK                 
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453

Query: 284 -------------------GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
                              G + +A+EL++ +   K   +   Y  +IDG CK+G L +A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L   +    L   V  YN ++ +LC +G +D+A  LF +M+
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 164/307 (53%), Gaps = 2/307 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   +  ++ GLC+     KA  L  +M+  ++ P+V +YN++I GFC   +  +A  L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G   ++V++ ++++  CK GKMDEA   L+ M  +G+  +  VY +L+ GFC  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++R + LF  +   G      +Y+ LI G+CK  +++ A  ++  M+ +G++P+V  Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L  GL  + + + A +L + M       +   Y   I+ LCK+G + +AVE+   ++ 
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKM 356
            +   D   YN L+ GLC  G L  A +L   + +       DV++YN +IH LC + ++
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440

Query: 357 DKARDLF 363
            +A D++
Sbjct: 441 HQALDIY 447



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 9/351 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EPN  TYN +IN LC+ G    A+ + E M           +P+ +TY  ++ GLC +G 
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR------TRPDNITYNILLGGLCAKGD 402

Query: 76  VDKA-KELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           +D+A K L+L +KD +  +P+V++YN+LIHG C  N  ++A  ++  ++++    + V+ 
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N   K G +++A  L + +    +  N+  Y  ++DGFC TG +N A+ L   M  
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              + +VF Y+ L++  CK   ++ A  L+ EM      PDVV +N +  G  +   ++ 
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L   M R G++ D + Y   I+   K GY+ EA+  F  +    +E D    + ++ 
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642

Query: 314 GLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
                G      EL + L  + +++   +T  +M +   +   MD A+ L 
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/276 (30%), Positives = 142/276 (51%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A   + KM + +   N V+ + L+  +        A  +   M+ +G   NV + N+++ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LC+N +  +A  LL  M +  + P+ F YNT++ GFC    + +A EL   M+  GC  
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++ ++ ILI+ +CK  +++ A+    EM   G++ D+V+Y +L  G  +  +++R   LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DE+   G +     Y T I G CK G + EA E+F  +       ++  Y  LIDGLC  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           G+ K A +L   +       + VTYNI+I+ LC DG
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 145/283 (51%), Gaps = 8/283 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V +YN LI+GLC+      AL++++ +    G        + VT   +++   K G 
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG------AGDRVTTNILLNSTLKAGD 474

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V+KA EL+ ++ D  I  N  TY ++I GFC     N AK L  +M    +QP+V  +N 
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCK G +D+A RL E M +    P+   +N ++DG    G +  AE L V M   G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              ++F+YS LIN + K   ++ A+S + +M+  G +PD  I +++        + ++  
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +L  ++    +  D     T +D +C +   ++  +  R LR+
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAK--RLLRV 695



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 17/286 (5%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKC------------LFIEMMDQGVQPNVVSFNVIMN 138
           +NP V  Y+ L++ F        + C            +F + +D G      + N +M 
Sbjct: 24  LNPRV--YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMA 80

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
           +L ++   + A      M++     N    + L++ +    +   A  +   M   G   
Sbjct: 81  KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           NV++++IL+ G C+N E   A+SL  EM    + PDV  YNT+  G  E  ++E+A +L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           +EM+  G +     +   ID  CK G + EA+   + ++ +  E D+  Y  LI G C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 319 GRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G L     LF   L RG      +TYN +I   C  G++ +A ++F
Sbjct: 261 GELDRGKALFDEVLERGDSPC-AITYNTLIRGFCKLGQLKEASEIF 305



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 79/168 (47%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
            F+ + L+    +++  E A S Y +ML      + V  + L     ++ +   AF +  
Sbjct: 72  AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M + G A + + +   + GLC+N    +AV L R +R      D+ +YN +I G C+  
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L+ A EL   +        +VT+ I+I A C  GKMD+A     +M+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 7/155 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF +++     P+V ++N +I+G  + G    A +L   M+           P+  
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG------LSPDLF 600

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+   K G++D+A   F KM D    P+    +S++       + ++   L  ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660

Query: 122 MDQGVQPNVVSFNVIMNELC-KNGKMDEASRLLEL 155
           +D+ +  +      +M+ +C  +  MD A RLL +
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/400 (32%), Positives = 195/400 (48%), Gaps = 45/400 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + +   GC PN+ TY  LI GLC+ G    A  L +EM       GVV  P+  
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMP----RRGVV--PSVW 324

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +IDG CK G +  A  +   M+    NP+  TYNSLIHG C     +EA+ L    
Sbjct: 325 TYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGA 383

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---------------------- 159
           + +G  P V++F  I+N  CK  K+D+A R+  +MI                        
Sbjct: 384 IARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRL 443

Query: 160 -------------GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                        G+ PN  +Y +++D +C  G+V  A E+F   E  GC+ N ++YS L
Sbjct: 444 KEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSL 503

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G  +++++  A++L ++M   GI P V+ Y TL  G  + H+ + AF+LF+ M+++G+
Sbjct: 504 IYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 563

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D  AY    D LCK+G   EA        ++   L    Y  L+DG  K+G  + A  
Sbjct: 564 TPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVV---LTKVTYTSLVDGFSKAGNTEFAAA 620

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L   +      AD  TY++++ ALC   K+++A  +   M
Sbjct: 621 LIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQM 660



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 183/361 (50%), Gaps = 7/361 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F  LR  G E + +T N L+ G CRTG    A  L   M        + C+ N  +YT +
Sbjct: 206 FRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPL------MGCRRNEYSYTIL 259

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I GLC+   V +A  L L M  +  +PN+ TY  LI G C     ++A+ L  EM  +GV
Sbjct: 260 IQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGV 319

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            P+V ++N +++  CK+G++ +A  +  LM   G  P+ + YN+L+ G C  G+ + AEE
Sbjct: 320 VPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEE 378

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           L     + G    V +++ +INGYCK ++I+ AL + S M+S   K D+  Y  L   L 
Sbjct: 379 LLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLI 438

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           + H+++ A    +E+  +G++ +   Y + ID  CK G +  A+E+F+         +  
Sbjct: 439 KKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAW 498

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y+ LI GL +  +L  A  L   +    +   V+TY  +I   C   + D A  LF  M
Sbjct: 499 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 558

Query: 367 E 367
           E
Sbjct: 559 E 559



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 175/407 (42%), Gaps = 42/407 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------NGEF 52
           +A AL  K++  G  P V TY TLI G C+      A  LFE M  NG        N   
Sbjct: 515 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 574

Query: 53  GVVCKP-----------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
             +CK                    VTYT+++DG  K G  + A  L  KM +E    + 
Sbjct: 575 DALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADS 634

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
            TY+ L+   C     NEA  +  +M  +GV+ N+V++ +I++E+ K GK D A  +   
Sbjct: 635 HTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNE 694

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           MI  G +P+A  Y   +  +C  GR+  A  L   ME  G   +V +Y++ ING      
Sbjct: 695 MISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGY 754

Query: 216 IEGALSLYSEMLSKGIKPDVVIY-------------NTLFI---GLFEIHQVERAFKLFD 259
           ++ A S    M+    +P+   Y             N  ++   G++   +++  ++L +
Sbjct: 755 MDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLE 814

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M +HG+      Y + I G CK   + EA  L   +       +   Y  LI   C   
Sbjct: 815 RMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 874

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             + A     ++        + +Y+ +I  LC +G  DKA+ LF D+
Sbjct: 875 LFEKAASFVTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDL 921



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 155/306 (50%), Gaps = 1/306 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+TVTY T+I   CKEG +  A   F  +++  +  +  T N+L+ G+C   D  +A  L
Sbjct: 181 PDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWL 240

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            + M   G + N  S+ +++  LC+   + EA  LL +M+Q G  PN   Y  L+ G C 
Sbjct: 241 LMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCK 300

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR++ A  L   M   G   +V++Y+ +I+GYCK+  ++ AL + + M   G  PD   
Sbjct: 301 EGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWT 360

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN+L  GL    + + A +L +     G +     +   I+G CK   I +A+ +   + 
Sbjct: 361 YNSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMI 419

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K +LD++AY  LI  L K  RLK A +    +    L  +VV Y  +I A C  GK+ 
Sbjct: 420 SSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVG 479

Query: 358 KARDLF 363
            A ++F
Sbjct: 480 AALEVF 485



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 128/244 (52%), Gaps = 3/244 (1%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L+ +++ +G+ P+ V++N ++   CK G +  A R   L+ + G+  + +  N L+ G+C
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYC 229

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            TG + +A  L + M  MGC+ N +SY+ILI G C+ + +  AL L   ML  G  P++ 
Sbjct: 230 RTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLH 289

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y  L  GL +  ++  A  L DEM R GV    W Y   IDG CK+G + +A+ +   +
Sbjct: 290 TYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLM 349

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALCADGK 355
                  D   YN LI GLC  G+   A EL   ++ RG     V+T+  +I+  C   K
Sbjct: 350 EGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAIARG-FSPTVITFTNIINGYCKAEK 407

Query: 356 MDKA 359
           +D A
Sbjct: 408 IDDA 411



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 163/365 (44%), Gaps = 32/365 (8%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA ++  ++ + G + N+  Y  +I+ + + G    A ++F EM +         KP+ +
Sbjct: 652  EALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGH------KPSAI 705

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TYT  I   CK G +++A  L  +M+   + P+VVTYN  I+G  +    + A      M
Sbjct: 706  TYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRM 765

Query: 122  MDQGVQPNVVSFNVIMNELCKNG----------------KMDEASRLLELMIQIGVRPNA 165
            +D   +PN  ++ +++    K                  K+D   +LLE M++ G+ P A
Sbjct: 766  IDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTA 825

Query: 166  FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
              Y++++ GFC   R+  A  L   M       N   Y++LI   C  K  E A S  + 
Sbjct: 826  VTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTN 885

Query: 226  MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
            M+  G +P +  Y+ L  GL +    ++A  LF ++       +  A++   DGL K G+
Sbjct: 886  MIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGH 945

Query: 286  IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
            +    +L   +      +D   Y+ + + + ++  +  ++          + A +V  N 
Sbjct: 946  VDICSQLLSAMENRHCRIDSETYSMVTNNIHEASGMYESY----------MCAPLVGQNR 995

Query: 346  MIHAL 350
            M HAL
Sbjct: 996  MQHAL 1000



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 47/182 (25%), Positives = 75/182 (41%), Gaps = 35/182 (19%)

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT----------- 270
           LYS+++ +G+ PD V YNT+ +   +   +  A + F  ++  G+  DT           
Sbjct: 170 LYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYC 229

Query: 271 ------------------------WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
                                   ++Y   I GLC+   + EA+ L   +       ++ 
Sbjct: 230 RTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLH 289

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y  LI GLCK GR+  A  L   +PR  ++  V TYN MI   C  G++  A  +   M
Sbjct: 290 TYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLM 349

Query: 367 EA 368
           E 
Sbjct: 350 EG 351


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 167/316 (52%), Gaps = 4/316 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +    GC P+VF+YN L+  LC  G +  A NL   MA G    G VC P+ V Y T
Sbjct: 135 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEG----GTVCSPDVVAYNT 190

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG  KEG V+KA +LF +M    I P++VTYNS++H  C A   ++A+    +M+++ 
Sbjct: 191 VIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR 250

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN  ++N ++      G+  EA R+ + M +  + P+    + LM   C  G++  A 
Sbjct: 251 VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEAR 310

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F +M   G   +VFSY+I++NGY     +     L+  ML  GI PD   +N      
Sbjct: 311 DVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAY 370

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                +++A  +F+EM+ HGV  D   YRT I  LC+ G + +A+E F  +       D 
Sbjct: 371 ANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDK 430

Query: 306 RAYNCLIDGLCKSGRL 321
            AYNCLI G C  G L
Sbjct: 431 YAYNCLIQGFCTHGIL 446



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 172/362 (47%), Gaps = 7/362 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A F +L   G   +    + L+ G C    T  AL++   + +   E G  C P+  +
Sbjct: 96  ALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI---LLHRTPELG--CVPDVFS 150

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENI--NPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           Y  ++  LC +G   +A  L   M +     +P+VV YN++I GF    D N+A  LF E
Sbjct: 151 YNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKE 210

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P++V++N +++ LCK   MD+A   L  M+   V PN + YN L+ G+  TG+
Sbjct: 211 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 270

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  +F  M       +V + S+L+   CK  +I+ A  ++  M  KG  PDV  YN 
Sbjct: 271 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 330

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G      +     LFD M   G+A D + +   I      G + +A+ +F  +R   
Sbjct: 331 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHG 390

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D+  Y  +I  LC+ G++  A E F  +    +  D   YN +I   C  G + K +
Sbjct: 391 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGILLKTQ 450

Query: 361 DL 362
            +
Sbjct: 451 GI 452



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 169/341 (49%), Gaps = 5/341 (1%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           C +G  + A+ LF   A+   +   V  P + TY  ++D   +    + A   F ++   
Sbjct: 49  CGSGPAL-AVALFNRAAS-RAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRT 106

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDE 148
            +  + +  + L+ GFC A   +EA  + +    + G  P+V S+N+++  LC  GK  +
Sbjct: 107 GLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQ 166

Query: 149 ASRLLELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           A  LL +M + G    P+   YNT++DGF   G VN+A +LF  M   G   ++ +Y+ +
Sbjct: 167 ADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSV 226

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++  CK + ++ A +   +M++K + P+   YN L  G     Q + A ++F EM+RH +
Sbjct: 227 VHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSI 286

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D       +  LCK G I EA ++F T+ +     D+ +YN +++G    G L    +
Sbjct: 287 LPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTD 346

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LF  +    +  D  T+N+ I A    G +DKA  +F +M 
Sbjct: 347 LFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMR 387



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 126/247 (51%), Gaps = 3/247 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P   ++ ++M+   +  + + A      +++ G+R +A + + L+ GFC   R + A 
Sbjct: 73  LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--KPDVVIYNTLF 242
           ++ +     +GC  +VFSY+IL+   C   +   A +L   M   G    PDVV YNT+ 
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVI 192

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A  LF EM + G+  D   Y + +  LCK   + +A    R +   +  
Sbjct: 193 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 252

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G   +G+ K A  +F+ + R  ++ DVVT ++++ +LC  GK+ +ARD+
Sbjct: 253 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 312

Query: 363 FLDMEAK 369
           F  M  K
Sbjct: 313 FDTMAMK 319



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 123/244 (50%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P++ TYN++++ LC+      A     +M N          PN  
Sbjct: 203 KACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKR------VLPNNW 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G    G   +A  +F +M+  +I P+VVT + L+   C      EA+ +F  M
Sbjct: 257 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V S+N+++N     G + + + L +LM+  G+ P+ + +N  +  +   G +
Sbjct: 317 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGML 376

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  +F  M   G K +V +Y  +I   C+  +++ A+  +++M+ +G+ PD   YN L
Sbjct: 377 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 436

Query: 242 FIGL 245
             G 
Sbjct: 437 IQGF 440



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 94/178 (52%), Gaps = 6/178 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++R     P+V T + L+  LC+ G    A ++F+ MA   G+      P+  
Sbjct: 273 EAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAM-KGQ-----NPDVF 326

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +++G   +G +    +LF  M  + I P+  T+N  I  +      ++A  +F EM
Sbjct: 327 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEM 386

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            D GV+P+VV++  ++  LC+ GKMD+A      MI  GV P+ + YN L+ GFC  G
Sbjct: 387 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHG 444



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 6/79 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G +P+V TY T+I  LCR G    A+  F +M +     GV   P+  
Sbjct: 378 KAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQ----GVA--PDKY 431

Query: 62  TYTTIIDGLCKEGFVDKAK 80
            Y  +I G C  G + K +
Sbjct: 432 AYNCLIQGFCTHGILLKTQ 450


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 203/403 (50%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F++++  G  P+V+T+   I   CRT     AL L   M +        C+ N V
Sbjct: 129 QAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQG------CQLNAV 182

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL---- 117
            Y T++ G  +E +  +A ELF  M    I P+V T+N L+H  C   +  E++ L    
Sbjct: 183 AYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKV 242

Query: 118 --------------FIE-------------MMD----QGVQPNVVSFNVIMNELCKNGKM 146
                         FI+             M+D    +G+ P+VV++N ++  LCKN  +
Sbjct: 243 LKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNV 302

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA + L  ++  G+ P+ F YNTL+DG+C  G +  AE++       G   + F+Y  L
Sbjct: 303 VEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSL 362

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING C+N EI+ AL+L++  L KG+KP V++YN L  GL +   + +A ++ +EM  +G 
Sbjct: 363 INGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGC 422

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           ++D W Y   I+GLCK G + +A  L        Y  D+  +N LIDG CK  +++   +
Sbjct: 423 SSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQ 482

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +   +    +  DV+TYN +++ L    K +   + F  M  K
Sbjct: 483 ILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEK 525



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 182/373 (48%), Gaps = 13/373 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK--- 57
           +EA     KL   G EP+ FTYNTLI+G C+ G    A  + +         G +CK   
Sbjct: 303 VEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQ---------GAICKGFV 353

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  TY ++I+GLC+   +D+A  LF     + + P V+ YN LI G C      +A  +
Sbjct: 354 PDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQM 413

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM + G   ++ ++N+++N LCK G + +A+ L+   I  G  P+ F +NTL+DG+C 
Sbjct: 414 MNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCK 473

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             ++    ++   M S G   +V +Y+ ++NG  K  + E  +  +  M+ KG  P+ + 
Sbjct: 474 QLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKIT 533

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL- 296
           YN L   L +  +V  A  L DE+   G+  DT ++ T I G   NG +  A +LFR + 
Sbjct: 534 YNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMG 593

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
              K       YN +I+   +   L +  +LF  +  G    D  TY +MI   C  G  
Sbjct: 594 EQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNT 653

Query: 357 DKARDLFLDMEAK 369
           D      L+M  K
Sbjct: 654 DSGYKFLLEMIEK 666



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 186/362 (51%), Gaps = 6/362 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   G  P+V T+N L++ LC+ G    +  L  ++         +C  N 
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKG-----MCS-NL 251

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+   I GLC++G +  A  +   +  E + P+VVTYN+LI G C  ++  EA+    +
Sbjct: 252 FTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHK 311

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++ G++P+  ++N +++  CK G +  A ++L+  I  G  P+ F Y +L++G C    
Sbjct: 312 LVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDE 371

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++RA  LF +    G K  V  Y++LI G C+   I  AL + +EM   G   D+  YN 
Sbjct: 372 IDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNL 431

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL ++  V  A  L ++    G   D + + T IDG CK   +   +++   +    
Sbjct: 432 VINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHG 491

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+  YN +++GL K+ + +   E F ++     + + +TYNI+  +LC  GK+++A 
Sbjct: 492 VTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEAL 551

Query: 361 DL 362
           DL
Sbjct: 552 DL 553



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 170/337 (50%), Gaps = 6/337 (1%)

Query: 31  RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           R G    A+++FE M   N      C+P+ ++Y  I++ L + G+  +A ++FL+MK+  
Sbjct: 88  RKGKVQEAVDVFERMDFYN------CEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVG 141

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I P+V T+   I  FC     + A  L   M+ QG Q N V++  ++    +     EA 
Sbjct: 142 IVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAY 201

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L   M++IG+ P+   +N L+   C  G V  +E L   +   G   N+F+++I I G 
Sbjct: 202 ELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGL 261

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+   + GA+S+   ++ +G+ PDVV YNTL  GL +   V  A K   ++   G+  D 
Sbjct: 262 CRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDG 321

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + Y T IDG CK G +  A ++ +      +  D   Y  LI+GLC++  +  A  LF +
Sbjct: 322 FTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNA 381

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                L   V+ YN++I  LC +G + +A  +  +M 
Sbjct: 382 ALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMS 418



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 148/296 (50%), Gaps = 9/296 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPN 59
           ++A  +  ++   GC  +++TYN +INGLC+ G    A NL  + +A G         P+
Sbjct: 408 LQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGY-------VPD 460

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T+ T+IDG CK+  ++   ++  KM    + P+V+TYNS+++G   A    +    F 
Sbjct: 461 VFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFE 520

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+++G  PN +++N++   LCK GK++EA  L++ ++  G+ P+   + T++ GF   G
Sbjct: 521 TMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNG 580

Query: 180 RVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            +  A +LF  M E     H   +Y+I+IN + +  ++     L+ EM + G  PD   Y
Sbjct: 581 DLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTY 640

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
             +  G       +  +K   EM   G       +   I+ LC    + EAV++  
Sbjct: 641 RVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIH 696



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 147/289 (50%), Gaps = 10/289 (3%)

Query: 78  KAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEM---MDQGVQPNVVSF 133
           KA E+F K+K E+    +++TY  +I    +  ++   + +  E    +D  +   V  +
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGV--Y 79

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
              M    + GK+ EA  + E M      P+   YN +M+    +G   +A ++F+ M++
Sbjct: 80  IGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKN 139

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   +V++++I I  +C+ K    AL L + M+S+G + + V Y T+  G +E +    
Sbjct: 140 VGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVE 199

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCL 311
           A++LF++M R G+  D   +   +  LCK G + E+  L    ++LK  +  ++  +N  
Sbjct: 200 AYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLN--KVLKKGMCSNLFTFNIF 257

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           I GLC+ G L  A  +  S+ R  L  DVVTYN +I  LC +  + +A 
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAE 306



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 112/229 (48%), Gaps = 7/229 (3%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G  P+V TYN+++NGL +       +  FE M          C PN +TY  + +
Sbjct: 486 KMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKG------CVPNKITYNILTE 539

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQ 127
            LCK G V++A +L  ++ ++ I P+ V++ ++I GF    D   A  LF  M +Q  V 
Sbjct: 540 SLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVS 599

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
               ++N+++N   +   +    +L   M   G  P+ + Y  ++DGFC+TG  +   + 
Sbjct: 600 HTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKF 659

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            + M   G   ++ ++  +IN  C    +  A+ +   M+  GI P+VV
Sbjct: 660 LLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           TYN +IN         +   LF EM  G       C P+T TY  +IDG C  G  D   
Sbjct: 604 TYNIMINAFAEKLDLHMGEKLFLEMGAGG------CAPDTYTYRVMIDGFCITGNTDSGY 657

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +  L+M ++   P++ T+  +I+  C  +  +EA  +   M+  G+ P VV+
Sbjct: 658 KFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVVN 709


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/367 (34%), Positives = 194/367 (52%), Gaps = 8/367 (2%)

Query: 2   EAAALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           EAA L   +   G  C P+V +Y+T+I+G  + G    A  LF +M     + G+   PN
Sbjct: 102 EAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKML----DHGI--PPN 155

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VT  ++IDGLCK   +DKA+ +  +M DE+I PN  TYNSLIHG+  +  W EA  +  
Sbjct: 156 VVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILK 215

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G +PNVV++N++++ LCK+G   EA  +   MIQ G +P+A  Y +L+ G+   G
Sbjct: 216 EMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEG 275

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +     +   M   G + N  ++SI I  YCK   ++ A   + +M   G  PD+V Y 
Sbjct: 276 NLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYT 335

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T+  GL +I +++ A   F +M   G++ +   + T I G    G   +A ELF  +   
Sbjct: 336 TVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDR 395

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+  +  +ID L K G++  A +LF  +PR     +VV+YN MIH     G++ + 
Sbjct: 396 GIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEV 455

Query: 360 RDLFLDM 366
             L  DM
Sbjct: 456 MKLLDDM 462



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 179/353 (50%), Gaps = 22/353 (6%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TYN+LI+G   +G    A+ + +EM+  +G+     +PN VTY  +ID LCK GF 
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSR-DGQ-----RPNVVTYNMLIDCLCKSGFH 242

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+E+F  M      P+  TY SL+HG+    +  E   +   M+  G++ N  +F++ 
Sbjct: 243 AEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIE 302

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   CK G++DEAS     M Q+G  P+   Y T++DG C  GR++ A   F  M   G 
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N+ +++ LI+G+    + E A  L+ EM+ +GI PDV I+  +   LF+  +V  A K
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LFD M R G   +  +Y T I G    G + E ++L   + ++  +     +N L+DG+ 
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             G                L  DV T   +I + C DG+++    LF +M  K
Sbjct: 483 SMG----------------LKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGK 519



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 143/287 (49%), Gaps = 50/287 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----------E 51
           EA  +F  +   G +P+  TY +L++G    G+ +V +N  +++   NG          E
Sbjct: 244 EAREIFNSMIQSGPKPDATTYGSLLHGYATEGN-LVEMNNVKDLMVQNGMRSNHHTFSIE 302

Query: 52  FGVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
               CK                    P+ VTYTT+IDGLCK G +D A   F +M D+ +
Sbjct: 303 IYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGL 362

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +PN++T+ +LIHGF     W +A+ LF EMMD+G+ P+V  F  +++ L K GK+ EA +
Sbjct: 363 SPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQK 422

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA-------------------EELFVSME 192
           L +LM + G +PN   YNT++ G+ + G V                        L   M 
Sbjct: 423 LFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMV 482

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           SMG K +V +   LI+  C++  IE  L+L+ EML K  K D +  N
Sbjct: 483 SMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITEN 529



 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 140/282 (49%), Gaps = 6/282 (2%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + + P++ T+  LI   C A   N       +++  G++ + V+F  ++  LC   +  +
Sbjct: 7   KKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSD 66

Query: 149 ASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYSI 205
           A  + L  M ++G  P+ F Y+TL+ G C   +   A EL   M   G  C  +V SYS 
Sbjct: 67  AMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYST 126

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G+ K  ++  A +L+ +ML  GI P+VV  N++  GL ++  +++A  +  +M    
Sbjct: 127 VIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH 186

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +   Y + I G   +G   EAV + + +       ++  YN LID LCKSG    A 
Sbjct: 187 IMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAR 246

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADG---KMDKARDLFL 364
           E+F S+ +     D  TY  ++H    +G   +M+  +DL +
Sbjct: 247 EIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMV 288



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 150/347 (43%), Gaps = 38/347 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  T+  +I   C  G ++       ++    +  + V +  L+   C     ++A  +
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 118 FIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDG 174
            +  M + G  P+V S++ ++  LC   K +EA+ L+ +M + G    P+   Y+T++ G
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           F   G V +A  LF  M   G   NV + + +I+G CK + ++ A ++  +M+ + I P+
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
              YN+L  G     Q   A ++  EM R G   +   Y   ID LCK+G+  EA E+F 
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 295 TLRILKYELDIRAYNCLIDG-----------------------------------LCKSG 319
           ++     + D   Y  L+ G                                    CK G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           RL  A   F  + +   + D+VTY  +I  LC  G++D A   F  M
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQM 357



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 122/244 (50%), Gaps = 3/244 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P++ +F ++++  C  G ++     L  +I+ G+R +A  +  L+   C   R + A 
Sbjct: 9   VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAM 68

Query: 186 ELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIYNTLF 242
            + +  M  +GC  +VFSYS L+ G C  K+ E A  L   M   G    PDVV Y+T+ 
Sbjct: 69  NIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVI 128

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+   V +A+ LF +M  HG+  +     + IDGLCK   + +A  + + +      
Sbjct: 129 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 188

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G   SG+   A  + + + R     +VVTYN++I  LC  G   +AR++
Sbjct: 189 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREI 248

Query: 363 FLDM 366
           F  M
Sbjct: 249 FNSM 252


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 183/351 (52%), Gaps = 7/351 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP+V  YNTLI+GLC+ G     L L E M +  G     C P+T+TY  +IDG CK G 
Sbjct: 380 EPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKG-----CAPDTITYNCLIDGFCKAGE 434

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++K KELF +M  E + PNVVT N+L+ G C     + A   F+E   +G++ + V++  
Sbjct: 435 IEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTA 494

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C     ++A  L   M++ G  P+A VY TL+ GF   GR+  A  +   ++ +G
Sbjct: 495 LINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLG 554

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +   Y+ LI G+C+  +      +  EM   G+KPD + YNTL     +   ++ A 
Sbjct: 555 IRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQ 614

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL-KYELDIRAYNCLIDG 314
           K+  +M + GV      Y   I+  C NG   EA+E+F+ ++   K   +   YN LI+ 
Sbjct: 615 KVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINS 674

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           LCK+ ++K A  L   +    +  +  TYN +   L  +  ++K  + F+D
Sbjct: 675 LCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFE-FMD 724



 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 187/366 (51%), Gaps = 4/366 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCKPNTVTY 63
           L  K+     +PNV T+  LIN +C+      AL + E+M+ G  +G   V  +P+ V Y
Sbjct: 327 LMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIY 386

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            T+IDGLCK G   +   L  +M+ +    P+ +TYN LI GFC A +  + K LF EM 
Sbjct: 387 NTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMN 446

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV PNVV+ N ++  +C+ G++  A        + G++ +A  Y  L++ FC      
Sbjct: 447 KEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFE 506

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A ELF  M   GC  +   Y  LI+G+ +   +  A  + +E+   GI+PD V YNTL 
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLI 566

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G    ++  R F++  EM+  G+  DT  Y T I    KNG +  A ++ R +      
Sbjct: 567 GGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVV 626

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIMIHALCADGKMDKARD 361
             +  Y  +I+  C +G    A E+F+ +     +  + V YNI+I++LC + K+  A  
Sbjct: 627 PTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVS 686

Query: 362 LFLDME 367
           L  DM+
Sbjct: 687 LMEDMK 692



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/372 (31%), Positives = 186/372 (50%), Gaps = 15/372 (4%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF ++   G        N+L+ GL R G+      L E+M   +       +PN VT+  
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD------IQPNVVTFGI 345

Query: 66  IIDGLCKEGFVDKAKELFLKMK--------DENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           +I+ +CK   VD A E+  KM           ++ P+VV YN+LI G C      E   L
Sbjct: 346 LINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGL 405

Query: 118 FIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
              M  Q G  P+ +++N +++  CK G++++   L + M + GV PN    NTL+ G C
Sbjct: 406 MERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMC 465

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            TGRV+ A   FV  +  G K +  +Y+ LIN +C     E A+ L++EML  G  PD +
Sbjct: 466 RTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAI 525

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +Y TL  G  +  ++  A  +  E+++ G+  DT  Y T I G C+        E+ + +
Sbjct: 526 VYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEM 585

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D   YN LI    K+G LK A ++ R + +  ++  V TY  +I+A C +G  
Sbjct: 586 EEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNG 645

Query: 357 DKARDLFLDMEA 368
           ++A ++F DM+A
Sbjct: 646 NEAMEIFKDMKA 657



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 146/311 (46%), Gaps = 30/311 (9%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------- 55
           LF ++   G  PNV T NTL+ G+CRTG    A+N F E      +   V          
Sbjct: 441 LFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFC 500

Query: 56  -------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
                              C P+ + Y T+I G  + G +  A  +  ++K   I P+ V
Sbjct: 501 NVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTV 560

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
            YN+LI GFC  N ++    +  EM + G++P+ +++N ++    KNG +  A +++  M
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCKNKE 215
           I+ GV P    Y  +++ +CL G  N A E+F  M++      N   Y+ILIN  CKN +
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNK 680

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+SL  +M   G+ P+   YN +F GL +   +E+ F+  D M  H    D      
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEI 740

Query: 276 FIDGLCKNGYI 286
             + L   G I
Sbjct: 741 LTEWLSAVGEI 751



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 163/358 (45%), Gaps = 40/358 (11%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N +  N  ++ L R+G    AL + +EM   N +    C+PN  T   +   L K    +
Sbjct: 189 NTYLRNVWLSILLRSGRVKDALKVIDEMFESNDDSN--CRPNDATGDILFSFLLKR---E 243

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           + +EL    +DE +N                        L ++  + GV  +      ++
Sbjct: 244 RNEELL--SEDEIVN------------------------LVLKFGEHGVLISSFWMGRLI 277

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC+N K +    L   MI++G    +   N+L+ G    G  NR  EL   M  M  +
Sbjct: 278 TRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQ 337

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEM--------LSKGIKPDVVIYNTLFIGLFEIH 249
            NV ++ ILIN  CK + ++ AL +  +M        +S  ++PDVVIYNTL  GL ++ 
Sbjct: 338 PNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVG 397

Query: 250 QVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
           + +    L + M+ + G A DT  Y   IDG CK G I +  ELF  +       ++   
Sbjct: 398 RQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTV 457

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N L+ G+C++GR+  A   F    R  +  D VTY  +I+A C     +KA +LF +M
Sbjct: 458 NTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 7/275 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   GC P+   Y TLI+G  + G    A  +  E+     + G+  +P+TV
Sbjct: 507 KAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK----KLGI--RPDTV 560

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I G C+     +  E+  +M++  + P+ +TYN+LI       D   A+ +  +M
Sbjct: 561 CYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
           +  GV P V ++  ++N  C NG  +EA  + + M     V PN  +YN L++  C   +
Sbjct: 621 IKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNK 680

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  L   M+  G   N  +Y+ +  G    K++E        M+     PD +    
Sbjct: 681 VKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEI 740

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           L   L  + ++ER  K     +     A   + R+
Sbjct: 741 LTEWLSAVGEIERLKKFVAGCEVSSSTAQKASSRS 775


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/352 (32%), Positives = 184/352 (52%), Gaps = 6/352 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PN  TYNT+I G C  G    AL++  EM    G       PN  TY T+I G CK G 
Sbjct: 142 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGR 196

Query: 76  VDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           VD+A ++F +M  +  + P  V YN+LI G+C     + A      M+++GV   V ++N
Sbjct: 197 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 256

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++++ L  +G+  EA  L+E M   G+ P+ F YN L++G C  G V +A E+F +M   
Sbjct: 257 LLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRR 316

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G +  V +Y+ LI    K  +++    L+ E + +GI+PD+V+YN L         ++RA
Sbjct: 317 GVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 376

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           F++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+  YN LI G
Sbjct: 377 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISG 436

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               G +K A  +   +        ++TYN +I  LC +G+ D A ++  +M
Sbjct: 437 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 488



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 176/362 (48%), Gaps = 18/362 (4%)

Query: 3   AAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           A ALF    +LR+  C     T+N ++  LC  G    AL L  +M           +PN
Sbjct: 98  AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 144

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            VTY T+I G C  G V  A ++  +M++   I PN  TY ++I G+C     +EA  +F
Sbjct: 145 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 204

Query: 119 IEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            EM+ +G V+P  V +N ++   C  GK+D A    + M++ GV      YN L+    +
Sbjct: 205 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 264

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR   A EL   M   G   +VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 265 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 324

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D   YN L+ GLC  GR+  A +L   +    +  D+VTYN +I      G + 
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444

Query: 358 KA 359
            A
Sbjct: 445 DA 446



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 136/244 (55%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+VFTYN LING C+ G+   AL +FE M+      GV  +   V
Sbjct: 270 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS----RRGV--RATVV 323

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I  L K+G V +  +LF +     I P++V YN+LI+    + + + A  +  EM
Sbjct: 324 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 383

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ V++N +M  LC  G++DEA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 384 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 443

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI PD   Y +L
Sbjct: 444 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 503

Query: 242 FIGL 245
             GL
Sbjct: 504 IEGL 507



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 148/285 (51%), Gaps = 10/285 (3%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            L+ +MK  ++  +  + + L+     A     A  LF +M    +     +FN+++  L
Sbjct: 69  RLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHL 124

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHN 199
           C  GK    +R LEL+ Q+  RPNA  YNT++ GFC  GRV  A ++   M E  G   N
Sbjct: 125 CSAGK---PARALELLRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 180

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLF 258
            ++Y  +I+G+CK   ++ A+ ++ EML+KG +KP+ V+YN L  G  +  +++ A    
Sbjct: 181 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 240

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           D M   GVA     Y   +  L  +G   EA EL   +       D+  YN LI+G CK 
Sbjct: 241 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKE 300

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G +K A E+F ++ R  + A VVTY  +I+AL   G++ +   LF
Sbjct: 301 GNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 345



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 6/277 (2%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL- 153
             T+N ++   C A     A    +E++ Q  +PN V++N ++   C  G++  A  ++ 
Sbjct: 114 TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+   V  YN L   LF   +   A++L +EM   G+A D + 
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+G CK G + +A+E+F  +        +  Y  LI  L K G+++   +LF    
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R  +  D+V YN +I++    G +D+A ++  +ME K
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 386



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 20/164 (12%)

Query: 218 GALSLYSEMLS--KGIKPDVVIY----------NTLFIGLFEIHQVERAFKLFDEMQRHG 265
            AL+L+  +LS  K + P  V+           N L      +     + +L+  M+   
Sbjct: 19  AALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLS 78

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +   T +    +  L          ++FR    L+  L    +N ++  LC +G+   A 
Sbjct: 79  LPISTASLHPLLSALPSAPAFALFADMFR----LRLPLCTTTFNIMLRHLCSAGKPARAL 134

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           EL R +PR     + VTYN +I   C+ G++  A D+  +M  +
Sbjct: 135 ELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRER 174


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/364 (33%), Positives = 192/364 (52%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G  PNV+T+   I  L R G    A  +F  M +        C P+ VTYT 
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG------CGPDLVTYTV 302

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +ID LC  G ++ AKELF+KMK     P+ V Y +L+  F    D +  K  + +M   G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+VV+F ++++ LCK    DEA    ++M + G+ PN   YNTL+ G    GR+  A 
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L  +MES+G +   ++Y+I I+ + K+ E   A+  + +M +KGI P++V  N     L
Sbjct: 423 KLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            E+ ++  A  +F+ ++ +G+A D+  Y   +    K G + EAV L   +     E D+
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
              N LID L K+GR+  AW++F  +    L   VVTYN ++  L  +G++ KA +LF  
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 366 MEAK 369
           M  K
Sbjct: 603 MIEK 606



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 208/394 (52%), Gaps = 43/394 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +F ++   GC P++ TY  LI+ LC  G    A  LF +M ANG+       KP+ 
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH-------KPDQ 332

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T++D     G +D  KE + +M+ +   P+VVT+  L+   C A D++EA   F  
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  QG+ PN+ ++N ++  L + G++++A +LL  M  +GV+P A+ YN  +D F  +G 
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452

Query: 181 VNRAEELFVSMESMG-------CKHNVFS----------------------------YSI 205
             +A E F  M++ G       C  +++S                            Y++
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++  Y K  +++ A++L SEM+  G +PDV++ N+L   L++  +V+ A+++FD M+   
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           ++     Y T + GL K G + +A+ELF ++   K   +  ++N L+D  CK+  +++A 
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELAL 632

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++F  +       DV+TYN +I+ L  + K++ A
Sbjct: 633 KMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 149/278 (53%), Gaps = 6/278 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  LF  ++  GC P+ FT+N L+    ++G       L++EM +        CKP+ +
Sbjct: 806  KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR------CKPDAI 859

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY  +I  L K   +DKA + F  +   +  P   TY  LI G        EA  LF EM
Sbjct: 860  TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             D G +PN   FN+++N   K G  + A +L + M+  G+RP+   Y  L+D  CL GRV
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            + A   F  ++S G   +  +Y+ +ING  K++ +E AL+LY+EM ++GI PD+  YN+L
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             + L     VE+A ++++E+Q  G+  D + Y   I G
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 185/358 (51%), Gaps = 6/358 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+R  G   N ++YN LI+ L ++G    AL ++  M +         KP+  TY+ ++ 
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG------LKPSLKTYSALMV 235

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            L K+   +    L  +M+D  + PNV T+   I     A   +EA  +F  M D+G  P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           ++V++ V+++ LC  G+++ A  L   M   G +P+  +Y TL+D F   G ++  +E +
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ME+ G   +V +++IL++  CK ++ + A + +  M  +GI P++  YNTL  GL   
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++E A KL   M+  GV    + Y  FID   K+G   +AVE F  ++      +I A 
Sbjct: 416 GRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N  +  L + GRL+ A  +F  L    L  D VTYN+M+      G++D+A +L  +M
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 169/321 (52%), Gaps = 6/321 (1%)

Query: 11   RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
            +  G  P + +YN LI  L    +T  A +LF++M N      V C P+  T+  ++   
Sbjct: 780  KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN------VGCAPDAFTFNMLLAVH 833

Query: 71   CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
             K G + +  EL+ +M      P+ +TYN +I     +N+ ++A   F +++    +P  
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 131  VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
             ++  +++ L K G+++EA RL E M   G +PN  ++N L++G+   G    A +LF  
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 191  MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
            M + G + ++ SY+IL++  C    ++ AL  ++E+ S G+ PD + YN +  GL +  +
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 251  VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
            +E A  L++EM+  G+  D + Y + +  L   G + +A  ++  L++   E D+  YN 
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 311  LIDGLCKSGRLKIAWELFRSL 331
            LI G   S   + A+ +++++
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNM 1094



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 166/342 (48%), Gaps = 5/342 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
            L+  LC+    + A  +F++     G       P   +Y  +I  L +  + +KA +LF 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLG-----ISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 85   KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
             MK+    P+  T+N L+     +    E   L+ EM+ +  +P+ +++N++++ L K+ 
Sbjct: 813  DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             +D+A      ++    RP    Y  L+DG    GR+  A  LF  M   GCK N   ++
Sbjct: 873  NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILINGY K  + E A  L+  M+++GI+PD+  Y  L   L    +V+ A   F+E++  
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            G+  D  AY   I+GL K+  + EA+ L+  +R      D+  YN L+  L  +G ++ A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 325  WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              ++  L    L  DV TYN +I         + A  ++ +M
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 187/404 (46%), Gaps = 44/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +    C PN  ++NTL++  C+     +AL +F +M   +      CKP+ +
Sbjct: 595 KAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD------CKPDVL 648

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GL KE  V+ A   F ++K ++++P+ VT  +L+ G        +A  +  + 
Sbjct: 649 TYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707

Query: 122 MDQG-----------------VQPNVVSFNVIMNELCKNGKMDEASRLLELM-------- 156
           M Q                  V+  +    +   EL  NG   E S L+ L+        
Sbjct: 708 MYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKR 767

Query: 157 ------------IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
                        ++G+ P    YN L+          +A +LF  M+++GC  + F+++
Sbjct: 768 ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFN 827

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +L+  + K+ +I     LY EM+S+  KPD + YN +   L + + +++A   F ++   
Sbjct: 828 MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
                   Y   IDGL K G + EA+ LF  +     + +   +N LI+G  K G  + A
Sbjct: 888 DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +LF+ +    +  D+ +Y I++  LC  G++D+A   F ++++
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 150/308 (48%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TI   L   G + +   +  KM+      N  +YN LIH    +    EA  ++  M
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRM 218

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P++ +++ +M  L K    +    LL+ M  +G+RPN + +   +      G++
Sbjct: 219 VSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKI 278

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+F  M+  GC  ++ +Y++LI+  C   ++E A  L+ +M + G KPD VIY TL
Sbjct: 279 DEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITL 338

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +   ++   + + +M+  G   D   +   +D LCK     EA   F  +R    
Sbjct: 339 LDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGI 398

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  YN LI GL ++GR++ A +L  ++    +     TYNI I      G+  KA +
Sbjct: 399 LPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVE 458

Query: 362 LFLDMEAK 369
            F  M+AK
Sbjct: 459 TFEKMKAK 466



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 189/430 (43%), Gaps = 65/430 (15%)

Query: 3    AAALFMKLRVFGCEPNVFTYNT----------------------------------LING 28
            A  +F K+ V  C+P+V TYNT                                  L+ G
Sbjct: 631  ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPG 690

Query: 29   LCRTGHTIVALNL----------------FEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            L + G    A+++                +E++  G      + K        +++G+C+
Sbjct: 691  LVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICR 750

Query: 73   E-GFVDKAKELFLKMKDE--------------NINPNVVTYNSLIHGFCYANDWNEAKCL 117
            E  F+     +  K K E               I+P + +YN LI      +   +A  L
Sbjct: 751  EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810

Query: 118  FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            F +M + G  P+  +FN+++    K+GK+ E   L + MI    +P+A  YN ++     
Sbjct: 811  FKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAK 870

Query: 178  TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            +  +++A + F  + S   +    +Y  LI+G  K   +E A+ L+ EM   G KP+  I
Sbjct: 871  SNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930

Query: 238  YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            +N L  G  +I   E A +LF  M   G+  D  +Y   +D LC  G + EA+  F  L+
Sbjct: 931  FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990

Query: 298  ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                + D  AYN +I+GL KS R++ A  L+  +    ++ D+ TYN ++  L   G ++
Sbjct: 991  STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVE 1050

Query: 358  KARDLFLDME 367
            +A+ ++ +++
Sbjct: 1051 QAKRMYEELQ 1060



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 129/240 (53%), Gaps = 6/240 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A   F  L      P   TY  LI+GL + G    A+ LFEEM+    ++G  CKPN  
Sbjct: 876  KALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS----DYG--CKPNCA 929

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             +  +I+G  K G  + A +LF +M +E I P++ +Y  L+   C A   +EA   F E+
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               G+ P+ +++N I+N L K+ +M+EA  L   M   G+ P+ + YN+LM    L G V
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             +A+ ++  ++  G + +VF+Y+ LI GY  ++  E A ++Y  M+  G  P++  Y  L
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 114/207 (55%), Gaps = 6/207 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  LF ++  +GC+PN   +N LING  + G T  A  LF+ M N         +P+  
Sbjct: 911  EAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG------IRPDLK 964

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +YT ++D LC  G VD+A   F ++K   ++P+ + YN +I+G   +    EA  L+ EM
Sbjct: 965  SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P++ ++N +M  L   G +++A R+ E +   G+ P+ F YN L+ G+ L+   
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084

Query: 182  NRAEELFVSMESMGCKHNVFSYSILIN 208
              A  ++ +M   GC  N+ +Y+ L N
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + ++ ++ ++  I   L   G + + + +L  M + G   NA+ YN L+     +G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A E++  M S G K ++ +YS L+    K ++ E  + L  EM   G++P+V  +  
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               L    +++ A+++F  M   G   D   Y   ID LC  G +  A ELF  ++   
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++ D   Y  L+D     G L    E +  +     + DVVT+ I++  LC     D+A
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 110/235 (46%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  L  + K+++ + + E M +  +R +   Y T+     + G + +   +   M  
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N +SY+ LI+   ++     AL +Y  M+S+G+KP +  Y+ L + L +    E 
Sbjct: 186 AGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              L  EM+  G+  + + +   I  L + G I EA E+FR +       D+  Y  LID
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            LC +G+L+ A ELF  +       D V Y  ++      G +D  ++ +  MEA
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA   F +L+  G +P+   YN +INGL ++     AL L+ EM N     G+V  P+  
Sbjct: 981  EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR----GIV--PDLY 1034

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY +++  L   G V++AK ++ +++   + P+V TYN+LI G+  + +   A  ++  M
Sbjct: 1035 TYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094

Query: 122  MDQGVQPNVVSFNVIMNE 139
            M  G  PN+ ++  + N+
Sbjct: 1095 MVDGCNPNIGTYAQLPNQ 1112


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/359 (34%), Positives = 196/359 (54%), Gaps = 12/359 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V   N +++   ++  T  A  L+ EM      F +  K + VT+  +I+ LCKE
Sbjct: 151 GVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM------FRMRIKSSVVTFNIMINVLCKE 204

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + KAKE    M+   I PNVVTYN++IHG+C       A+ +F  M  +GV+P+  ++
Sbjct: 205 GKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTY 264

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
              ++ +CK GK++EAS +LE M +IG+RP A  YNTL+DG+C  G +  A +    M  
Sbjct: 265 GSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVR 324

Query: 194 MGCKHNVFSYSILINGY---CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
            G    V +Y++LI+     CK  E +G   +  EM  KG+ PD V YN L  G      
Sbjct: 325 EGLMPTVSTYNMLIHALFLDCKMDEADG---IIKEMSEKGLVPDSVTYNILINGYCRCGN 381

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V++AF L DEM   G+      Y + I  L K G + +A +LF  +       D+  +N 
Sbjct: 382 VKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNA 441

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LIDG C +G +  A+ + + + +  ++ D VT+N ++   C +GK++ AR+L  +M+++
Sbjct: 442 LIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSR 500



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 193/360 (53%), Gaps = 6/360 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +   G +PNV TYNT+I+G C  G    A  +F+ M       GV  KP++ TY + I G
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCR----GV--KPDSYTYGSFISG 270

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           +CKEG +++A  +  KMK+  + P  VTYN+LI G+C   +   A     +M+ +G+ P 
Sbjct: 271 MCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPT 330

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V ++N++++ L  + KMDEA  +++ M + G+ P++  YN L++G+C  G V +A  L  
Sbjct: 331 VSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHD 390

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M S G +    +Y+ LI    K   ++ A  L+ +++ KGI PD++++N L  G     
Sbjct: 391 EMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANG 450

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            ++RAF +  EM +  V  D   + T + G C+ G +  A EL   ++    + D  +YN
Sbjct: 451 NMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYN 510

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LI G  K G +K A+ +   +        ++TYN +I  LC + + D A  L  +M +K
Sbjct: 511 TLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISK 570



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 182/348 (52%), Gaps = 6/348 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  ++  G +P+ +TY + I+G+C+ G    A  + E+M     E G+  +P  VT
Sbjct: 245 ARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMK----EIGL--RPTAVT 298

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C +G ++ A +   KM  E + P V TYN LIH        +EA  +  EM 
Sbjct: 299 YNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMS 358

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P+ V++N+++N  C+ G + +A  L + MI  G++P    Y +L+      GR+ 
Sbjct: 359 EKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMK 418

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A++LF  +   G   ++  ++ LI+G+C N  ++ A ++  EM    + PD V +NTL 
Sbjct: 419 QADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLM 478

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     +VE A +L +EM+  G+  D  +Y T I G  K G + +A  +   +  + + 
Sbjct: 479 QGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFN 538

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
             +  YN LI GLCK+     A +L + +    +  +  TY  +I  +
Sbjct: 539 PTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/323 (31%), Positives = 161/323 (49%), Gaps = 3/323 (0%)

Query: 41  LFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS 100
           +F E+    G  G+      V Y  +I   C+    D A E F  MK + + P+V   N 
Sbjct: 105 VFNELGVARGVLGI---KTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACND 161

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           ++  F  +N   +A  L+ EM    ++ +VV+FN+++N LCK GK+ +A   + LM  +G
Sbjct: 162 MLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALG 221

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           ++PN   YNT++ G+C  GRV  A  +F  M+  G K + ++Y   I+G CK  ++E A 
Sbjct: 222 IKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEAS 281

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  +M   G++P  V YNTL  G      +E AF   D+M R G+      Y   I  L
Sbjct: 282 GMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHAL 341

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
             +  + EA  + + +       D   YN LI+G C+ G +K A+ L   +    +    
Sbjct: 342 FLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTR 401

Query: 341 VTYNIMIHALCADGKMDKARDLF 363
           VTY  +I+ L   G+M +A DLF
Sbjct: 402 VTYTSLIYVLSKRGRMKQADDLF 424



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 129/239 (53%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V +++++   C+  + D+A    ++M   GV P+    N ++  F  + R  +A  L+  
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M  M  K +V +++I+IN  CK  +++ A      M + GIKP+VV YNT+  G     +
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           VE A  +FD M+  GV  D++ Y +FI G+CK G + EA  +   ++ +        YN 
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LIDG C  G L++A++    + R  L+  V TYN++IHAL  D KMD+A  +  +M  K
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 188/368 (51%), Gaps = 5/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +   +  FG EP+++TYN L  GLC+ G    A  L +EM     E   +  P+ V
Sbjct: 298 QATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEM-----EHLSIVSPDVV 352

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D   K      A  L  +M+D+ +  ++VT+N ++ G C      EA      M
Sbjct: 353 TYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMM 412

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V+++N +++  CK   + +A  L++ M++ G++ + F  NTL+   C   R 
Sbjct: 413 TEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRY 472

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AEEL  S    G   +  SY  ++  Y K  + E AL L+ EM  + + P +  YNTL
Sbjct: 473 EEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTL 532

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  I ++  A    +E+ + G+  D   Y   I   CK G + +A +    +    +
Sbjct: 533 IKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYF 592

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+   N L++GLC  G+L+ A +LF S        DV+TYN +I ALC DG +D A  
Sbjct: 593 KPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALH 652

Query: 362 LFLDMEAK 369
            F DMEA+
Sbjct: 653 FFADMEAR 660



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 182/347 (52%), Gaps = 6/347 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNTL++   +   +  ALNL EEM +     GV  K + VT+  ++ GLC+EG +
Sbjct: 349 PDVVTYNTLVDACFKYQRSSDALNLLEEMRDK----GV--KSSLVTHNIVVKGLCREGQL 402

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A      M +E + P+V+TYN+LI  +C A +  +A  L  EM+  G++ +  + N +
Sbjct: 403 EEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTL 462

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LCK  + +EA  LL    Q G  P+   Y T+M  +    +   A  L+  M     
Sbjct: 463 LYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKL 522

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++++Y+ LI G C   ++  A+   +E++ KG+ PD   YN +     +   +E+AF+
Sbjct: 523 TPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQ 582

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             ++M  +    D     T ++GLC +G + +A++LF +      ++D+  YN LI  LC
Sbjct: 583 FHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALC 642

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K G +  A   F  +    L  D  TYN+++ AL   G+ ++A+++ 
Sbjct: 643 KDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNML 689



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 184/431 (42%), Gaps = 80/431 (18%)

Query: 3   AAALFMKLRVFG-CEPNVFTYNTLINGLCRTGHTI--VALNLFEEMANGNGEFGVVCKPN 59
           AA L    R  G   P++   N +++ L R+  T    +L++F  +        +   PN
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSL------IALRLHPN 209

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T+  ++   C +G +  A      M+   ++P+VVTYN+L+   C      EA+ L  
Sbjct: 210 HYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLA 269

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M  +G+ P   ++N +++   + G + +A+ ++E M   G  P+ + YN L  G C  G
Sbjct: 270 RMKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAG 329

Query: 180 RVNRAEELFVSMESM------------------------------------GCKHNVFSY 203
           +V+ A +L   ME +                                    G K ++ ++
Sbjct: 330 KVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTH 389

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +I++ G C+  ++E AL     M  +G+ PDV+ YNTL     +   V +AF L DEM R
Sbjct: 390 NIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRT---------------------------- 295
            G+  DT+   T +  LCK     EA EL R+                            
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509

Query: 296 -------LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
                  +   K    I  YN LI GLC  G+L  A +    L +  L+ D  TYNI+IH
Sbjct: 510 ALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIH 569

Query: 349 ALCADGKMDKA 359
           A C +G ++KA
Sbjct: 570 AYCKEGDLEKA 580



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 169/345 (48%), Gaps = 6/345 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  G + ++ T+N ++ GLCR G    AL   + M     E G+   P+ +
Sbjct: 369 DALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKMMT----EEGLA--PDVI 422

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID  CK   V KA  L  +M    +  +  T N+L++  C    + EA+ L    
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP 482

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ VS+  +M    K  K + A  L + M +  + P+ + YNTL+ G C  G++
Sbjct: 483 PQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKL 542

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +    +   G   +  +Y+I+I+ YCK  ++E A   +++ML    KPDVV  NTL
Sbjct: 543 TEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTL 602

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E+A KLF+     G   D   Y T I  LCK+G +  A+  F  +     
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGL 662

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
           + D   YN ++  L ++GR + A  +   L     +++  +Y ++
Sbjct: 663 QPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLI 707



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 175/382 (45%), Gaps = 50/382 (13%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK------- 57
           G  P+V TYNTLI+  C+  +   A  L +EM     +            +CK       
Sbjct: 416 GLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 475

Query: 58  -------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                        P+ V+Y T++    KE   + A  L+ +M    + P++ TYN+LI G
Sbjct: 476 EELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKG 535

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C      EA     E+M +G+ P+  ++N+I++  CK G +++A +    M++   +P+
Sbjct: 536 LCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPD 595

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
               NTLM+G CL G++ +A +LF S    G K +V +Y+ LI   CK+ +++ AL  ++
Sbjct: 596 VVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFA 655

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M ++G++PD   YN +   L E  + E A  +  ++   G  ++ ++Y           
Sbjct: 656 DMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSY----------P 705

Query: 285 YIVEAVELFRTLRILKYELDIRA-----------YNCLIDGLCKSGRLKIAWELFRSLPR 333
            I  + E  +T +  + + D  +           YN  +  LC  G+LK A  +   + +
Sbjct: 706 LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQ 765

Query: 334 GVLIADVVTYNIMIHALCADGK 355
             +  D  TY  ++  L    K
Sbjct: 766 KGMSVDSSTYITLMEGLIKRQK 787



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 148/310 (47%), Gaps = 3/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKEL--FLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           +P+      ++  L +         L  F  +    ++PN  T+N L+H  C      +A
Sbjct: 170 RPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVHTHCSKGTLADA 229

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
                 M   G+ P+VV++N ++   C+ G + EA  LL  M + G+ P    YNTL+  
Sbjct: 230 LSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSA 289

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KP 233
           +   G + +A  +  +M + G + ++++Y++L  G C+  +++ A  L  EM    I  P
Sbjct: 290 YARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSP 349

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV YNTL    F+  +   A  L +EM+  GV +    +   + GLC+ G + EA+   
Sbjct: 350 DVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRL 409

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           + +       D+  YN LID  CK+  +  A+ L   + R  L  D  T N +++ LC +
Sbjct: 410 KMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 469

Query: 354 GKMDKARDLF 363
            + ++A +L 
Sbjct: 470 KRYEEAEELL 479


>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
          Length = 332

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 165/290 (56%), Gaps = 8/290 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM------ANGNGEFGVVCKPNTVTYTTII 67
           GC PNV T+NTL+N LCR G  + AL L + M       N  G+  +  K + V  T I+
Sbjct: 5   GCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHI--KADVVISTAIV 62

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           D LCK+G    A+ LF +M ++ I PNV+TYN +I  FC++  W++A  L   M+++ + 
Sbjct: 63  DRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQIN 122

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P++V+F+ ++N   K  K+ EA  + + M++  + P    YN+++DGFC   RV+ A+ +
Sbjct: 123 PDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRM 182

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
             SM S GC  +V ++S LINGYCK K ++  + ++ EM  +GI  + V Y TL  G  +
Sbjct: 183 LDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ 242

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +  ++ A  L +EM   GVA D   +   + GLC    + +A  +   L+
Sbjct: 243 VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 292



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 153/289 (52%), Gaps = 10/289 (3%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPN----------VVTYNSLIHGF 105
           C+PN VT+ T+++ LC+EG V +A  L  +M +E   PN          VV   +++   
Sbjct: 6   CRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVDRL 65

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C   +   A+ LF EM ++G+ PNV+++N +++  C +G+  +A +LL  MI+  + P+ 
Sbjct: 66  CKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDI 125

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             ++ L++ F    +V+ AEE++  M          +Y+ +I+G+CK   ++ A  +   
Sbjct: 126 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDS 185

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M SKG  PDVV ++TL  G  +  +V+   ++F EM R G+ A+T  Y T I G C+ G 
Sbjct: 186 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 245

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           +  A +L   +       D   ++C++ GLC    L+ A+ +   L + 
Sbjct: 246 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 294



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 133/256 (51%), Gaps = 10/256 (3%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF----------VYNT 170
           M++ G +PNVV+FN +MN LC+ G++ EA  L++ M++ G +PNA           +   
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++D  C  G    A+ LF  M   G   NV +Y+ +I+ +C +     A  L   M+ K 
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           I PD+V ++ L     +  +V  A +++ EM R  +   T  Y + IDG CK   + +A 
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +  ++       D+  ++ LI+G CK+ R+    E+F  + R  ++A+ VTY  +IH  
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 240

Query: 351 CADGKMDKARDLFLDM 366
           C  G +D A+DL  +M
Sbjct: 241 CQVGDLDAAQDLLNEM 256



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 143/292 (48%), Gaps = 10/292 (3%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN----------VVSFNV 135
           M +    PNVVT+N+L++  C      EA  L   M+++G QPN          VV    
Sbjct: 1   MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I++ LCK+G    A  L   M + G+ PN   YN ++D FC +GR + A++L   M    
Sbjct: 61  IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              ++ ++S LIN + K +++  A  +Y EML   I P  + YN++  G  +  +V+ A 
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++ D M   G + D   + T I+G CK   +   +E+F  +       +   Y  LI G 
Sbjct: 181 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGF 240

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           C+ G L  A +L   +    +  D +T++ M+  LC+  ++ KA  +  D++
Sbjct: 241 CQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQ 292



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 6/162 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  ++ ++  +   P   TYN++I+G C+      A  + + MA+        C P+ V
Sbjct: 143 EAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG------CSPDVV 196

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++T+I+G CK   VD   E+F +M    I  N VTY +LIHGFC   D + A+ L  EM
Sbjct: 197 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 256

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           +  GV P+ ++F+ ++  LC   ++ +A  +LE + +  V P
Sbjct: 257 ISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKSEVCP 298


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 197/369 (53%), Gaps = 21/369 (5%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F   P+V+ +N LI+GL + G+   A+ LFE M +          P+  TY T+I GLCK
Sbjct: 91  FSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR------VNPDIFTYNTVISGLCK 144

Query: 73  EGFVDKAKELFLKM--KDENINPNVVTYNSLIH-GFCYANDWNEAKCLFIEMMDQGVQPN 129
            G ++KA+EL  +M  +     P++VTYN+LI+ G C   D  EA  +   M   G  P+
Sbjct: 145 SGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPD 204

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V+++N I++ LC  G++ EA+ +L+ M      P+   +NTL+DGFC  G + RA E+  
Sbjct: 205 VITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLE 261

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M       +V +Y+IL+NG C+  +++ A  L  E++ +G  PDV+ Y +L  GL +  
Sbjct: 262 EMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSG 321

Query: 250 QVERAFKLFDEMQRHGVAADT---------WAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           ++E A KL  EM    + A+          + Y   + GL K+G I +AV L   L    
Sbjct: 322 EIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARG 381

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y  D+  YN LIDGLCK+ R++ A +L   +       + VT   ++  LC  G++D A 
Sbjct: 382 YVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAW 441

Query: 361 DLFLDMEAK 369
            L ++M  K
Sbjct: 442 SLVVEMSRK 450



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/368 (32%), Positives = 187/368 (50%), Gaps = 17/368 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +      P++FTYNT+I+GLC++G+   A  L EEM    G+      P+ V
Sbjct: 115 QAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGK----SAPDIV 170

Query: 62  TYTTIID-GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY T+I+ G+CK+G V++A E+   MK     P+V+TYNS+IH  C A    EA  +   
Sbjct: 171 TYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKT 230

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P++V+FN +++  CK G +  A  +LE M +  + P+   Y  L++G C  G+
Sbjct: 231 M---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQ 287

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE---------GALSLYSEMLSKGI 231
           V  A  L   +   G   +V +Y+ L++G CK+ EIE          A  + +EM+S  +
Sbjct: 288 VQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINM 347

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P +  YN +  GL +   + +A  L  ++   G   D   Y T IDGLCK   + EA +
Sbjct: 348 VPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACD 407

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +  L    +      ++ GLC+ GR+  AW L   + R     +VV Y  +I  LC
Sbjct: 408 LADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLC 467

Query: 352 ADGKMDKA 359
              +MD A
Sbjct: 468 KSDRMDDA 475



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 198/402 (49%), Gaps = 56/402 (13%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +V +YN L++ L ++GH      +++++ +        C PN VT+  +I G CK 
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG------CSPNLVTFKILIRGNCKA 75

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A E    + + ++ P+V  +N LIHG     + ++A  LF  M    V P++ ++
Sbjct: 76  GQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTY 135

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVR------------------------------- 162
           N +++ LCK+G +++A  LLE MI+ G +                               
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDG 195

Query: 163 -------PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                  P+   YN+++   C+ GRV  A E+   +++M C  ++ +++ L++G+CK   
Sbjct: 196 MKLAGPAPDVITYNSIIHALCVAGRVVEAAEI---LKTMSCSPDLVTFNTLLDGFCKAGM 252

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  AL +  EM  + I PDV+ Y  L  GL  + QV+ AF L +E+ R G   D  AY +
Sbjct: 253 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 312

Query: 276 FIDGLCKNGYIVEAVELFRTL---RILKYELDIR------AYNCLIDGLCKSGRLKIAWE 326
            +DGLCK+G I EA +L + +    IL   + I        YN ++ GL K G +  A  
Sbjct: 313 LVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVS 372

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           L   L     + DVVTYN +I  LC   ++ +A DL  +M +
Sbjct: 373 LISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMAS 414



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 165/336 (49%), Gaps = 53/336 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +++ G  P+V TYN++I+ LC  G  + A  + + M+         C P+ V
Sbjct: 188 EALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---------CSPDLV 238

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T++DG CK G + +A E+  +M  ENI P+V+TY  L++G C       A  L  E+
Sbjct: 239 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM------------------------- 156
           + QG  P+V+++  +++ LCK+G+++EA +L++ M                         
Sbjct: 299 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVL 358

Query: 157 -------------------IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
                              +  G  P+   YNTL+DG C   RV  A +L   M S+GC 
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCF 418

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  +   ++ G C+   ++ A SL  EM  K   P+VV+Y +L  GL +  +++ A  +
Sbjct: 419 PNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVV 478

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            D M+  GVA D +AYR  I  +   G + EA+ ++
Sbjct: 479 LDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMY 514



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 174/343 (50%), Gaps = 13/343 (3%)

Query: 31  RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           R+    +A+  F+     +G      K +  +Y  ++D L K G   +  +++  +    
Sbjct: 3   RSSRPDLAIQFFDWAGEQDGY-----KHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSG 57

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEA 149
            +PN+VT+  LI G C A     A   F+  +D+  V P+V  FN +++ L K+G  D+A
Sbjct: 58  CSPNLVTFKILIRGNCKAGQATRA-LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQA 116

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH--NVFSYSILI 207
            +L E M    V P+ F YNT++ G C +G + +A EL   M   G K   ++ +Y+ LI
Sbjct: 117 VKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLI 176

Query: 208 N-GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           N G CK+ ++E AL +   M   G  PDV+ YN++   L    +V  A ++   M     
Sbjct: 177 NAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---C 233

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + D   + T +DG CK G +  A+E+   +       D+  Y  L++GLC+ G++++A+ 
Sbjct: 234 SPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFY 293

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   + R   I DV+ Y  ++  LC  G++++A  L  +M A+
Sbjct: 294 LLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAR 336



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 138/276 (50%), Gaps = 15/276 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TY  L+NGLCR G   VA  L EE+       G +  P+ + YT+++DGLCK G +
Sbjct: 270 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQ----GYI--PDVIAYTSLVDGLCKSGEI 323

Query: 77  DKA---------KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           ++A         +E+  +M   N+ P + TYN ++ G       ++A  L  +++ +G  
Sbjct: 324 EEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYV 383

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+VV++N +++ LCK  ++ EA  L + M  +G  PN     +++ G C  GRV+ A  L
Sbjct: 384 PDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSL 443

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
            V M       NV  Y+ LI+G CK+  ++ A  +   M  +G+  D   Y  L + +  
Sbjct: 444 VVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIH 503

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             +V  A  ++DEM   G   D    +T  +    N
Sbjct: 504 GGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 539


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 195/365 (53%), Gaps = 12/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L M ++  G  PN  TYN L+ G C+ G    A N+ E M   N        P+  
Sbjct: 261 DARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN------LLPDVW 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLC EG +++A +L  +M++  + P+VV+YN+LI+G    +  +EA  L  EM
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++GV+PN V+ N+++   CK GKMD+AS  +  M + G  P+   YNTL++G+C  G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 182 NRAEELFVSMESMGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
             A   F +M+ MG K+   +  + + ++   C+ K++E A  L S    +G   D V Y
Sbjct: 435 GEA---FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL +G F+   V+RA KL+DEM+   +   T  Y   I GLC+ G   +A+     L  
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D   YN ++ G C+ G ++ A++    +       DV T NI++  LC +G ++K
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEK 611

Query: 359 ARDLF 363
           A  LF
Sbjct: 612 ALKLF 616



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 183/353 (51%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V +YNTLING         A  L EEM+    E GV  KPN VT+  ++   CKEG +
Sbjct: 346 PDVVSYNTLINGCLEWSKISEAFKLLEEMS----EKGV--KPNAVTHNIMVKWYCKEGKM 399

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A     KM++   +P+ VTYN+LI+G+C A +  EA     EM  + ++ + V+ N I
Sbjct: 400 DDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTI 459

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC+  K++EA +LL    + G   +   Y TL+ G+   G V+RA +L+  M+    
Sbjct: 460 LRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +Y+ +I G C+  + E A+S  +E+L  G+ PD   YNT+  G      VE+AF+
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQ 579

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             ++M  +    D +     + GLC  G + +A++LF T       +D   YN LI  LC
Sbjct: 580 FHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K GRL  A+ L   +    L  D  TYN +I AL   G++ +A +    M  K
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEK 692



 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 182/348 (52%), Gaps = 8/348 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  PNV T+N +I G C       A+     M   N      C P+ VTY TI+D LCK
Sbjct: 202 LGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYN------CSPDNVTYNTILDTLCK 255

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVV 131
           +G +  A++L + MK   + PN  TYN L++G+C    W +     IE+M Q  + P+V 
Sbjct: 256 KGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMG-WLKEAANVIELMTQNNLLPDVW 314

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++N+++N LC  G+++EA +L + M  + + P+   YNTL++G     +++ A +L   M
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G K N  +++I++  YCK  +++ A +  ++M   G  PD V YNTL  G  +   +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             AF+  DEM R  +  D+    T +  LC+   + EA +L  + R   Y +D  +Y  L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           I G  K G +  A +L+  +    +I   VTYN +I  LC  GK ++A
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA 542



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 189/369 (51%), Gaps = 7/369 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCR--TGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           A  +F K++     PN+ T NTL+N L R  + H++   +   E  N   + G+V  PN 
Sbjct: 154 AFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV---SFSREAFNDAIKLGIV--PNV 208

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  +I G C E     A E    M   N +P+ VTYN+++   C      +A+ L ++
Sbjct: 209 NTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMD 268

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN  ++N+++   CK G + EA+ ++ELM Q  + P+ + YN L++G C  GR
Sbjct: 269 MKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGR 328

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   ME++    +V SY+ LING  +  +I  A  L  EM  KG+KP+ V +N 
Sbjct: 329 IEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNI 388

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +     +  +++ A     +M+  G + D   Y T I+G CK G + EA      +    
Sbjct: 389 MVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN 448

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            ++D    N ++  LC+  +L+ A++L  S  +     D V+Y  +I     DG +D+A 
Sbjct: 449 MKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRAL 508

Query: 361 DLFLDMEAK 369
            L+ +M+ K
Sbjct: 509 KLWDEMKEK 517



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 179/369 (48%), Gaps = 30/369 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+    K+   G  P+  TYNTLING C+ G+   A    +EM   N       K ++V
Sbjct: 401 DASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKN------MKMDSV 454

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T  TI+  LC+E  +++A +L    +      + V+Y +LI G+    + + A  L+ EM
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + P+ V++N I+  LC+ GK ++A   L  +++ G+ P+   YNT++ G+C  G V
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +    M     K +VF+ +IL+ G C    +E AL L++  +SKG   D V YNTL
Sbjct: 575 EKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTL 634

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-------- 293
              L +  +++ AF L  EM+   +  D + Y   I  L  +G I EA E          
Sbjct: 635 ITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGN 694

Query: 294 ---RTLRILKYELDIR------------AYNCLIDGLCKSGRLKIAWELF-RSLPRGVLI 337
              + L++ K E  +             AY+  I  LC  G+ K A  +F  S  +G+ +
Sbjct: 695 LPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITV 754

Query: 338 ADVVTYNIM 346
                 N+M
Sbjct: 755 DKSTYINLM 763



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/347 (28%), Positives = 153/347 (44%), Gaps = 38/347 (10%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL------------- 101
           +  P+     T I    + G    A ++F KMK   + PN++T N+L             
Sbjct: 130 LTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSV 189

Query: 102 -------------------------IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
                                    I+G+C  N + +A      M      P+ V++N I
Sbjct: 190 SFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTI 249

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK G++ +A  LL  M   G+ PN   YN L+ G+C  G +  A  +   M     
Sbjct: 250 LDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNL 309

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V++Y++LING C    IE A  L  EM +  + PDVV YNTL  G  E  ++  AFK
Sbjct: 310 LPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFK 369

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L +EM   GV  +   +   +   CK G + +A      +    +  D   YN LI+G C
Sbjct: 370 LLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYC 429

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K+G +  A+     + R  +  D VT N ++  LC + K+++A  L 
Sbjct: 430 KAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLL 476



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 65/167 (38%), Gaps = 29/167 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF      G   +  TYNTLI  LC+ G    A NL  EM     E G    P+  
Sbjct: 611 KALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK--ELG----PDHY 664

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPN-----------------------VVTY 98
           TY  II  L   G + +A+E   KM ++   P+                        V Y
Sbjct: 665 TYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAY 724

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           +  I   C    + +A  +F E   +G+  +  ++  +M+ L K  K
Sbjct: 725 SEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKRRK 771


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 194/368 (52%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L +++   G  P+V +Y+ +++G C+       L L EE+           KPN  
Sbjct: 270 EAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKG------LKPNQY 323

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +II  LCK G V +A+++   MK++ I P+ V Y +LI GF  + + +    LF EM
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ V++  +++ LC+ GK+ EA +L   M+  G++P+   Y  L+DG+C  G +
Sbjct: 384 KRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEM 443

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M   G   NV +Y+ L++G CK  E++ A  L  EM  KG++P+V  YN L
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++  +E+A KL +EM   G   DT  Y T +D  CK G + +A EL R +     
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGL 563

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  I  +N L++G C SG L+    L + +    ++ +  T+N ++   C    M    +
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIE 623

Query: 362 LFLDMEAK 369
           ++  M A+
Sbjct: 624 IYKGMHAQ 631



 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 186/357 (52%), Gaps = 6/357 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF +++     P+  TY ++I+GLC+ G  + A  LF EM +         KP+ VTYT 
Sbjct: 379 LFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG------LKPDEVTYTA 432

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK G + +A  L  +M ++ + PNVVTY +L+ G C   + + A  L  EM ++G
Sbjct: 433 LIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKG 492

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +QPNV ++N ++N LCK G +++A +L+E M   G  P+   Y T+MD +C  G + +A 
Sbjct: 493 LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAH 552

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           EL   M   G +  + ++++L+NG+C +  +E    L   ML KGI P+   +N+L    
Sbjct: 553 ELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQY 612

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
              + +    +++  M   GV  DT  Y   I G CK   + EA  L + +    + L  
Sbjct: 613 CIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTA 672

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +YN LI G  K  + + A +LF  +     IA+   Y+I +     +G  +   +L
Sbjct: 673 ASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/392 (30%), Positives = 198/392 (50%), Gaps = 29/392 (7%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN---------------GNG 50
           L  +L+  G +PN +TYN++I+ LC+TG  + A  +   M N               G G
Sbjct: 309 LMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFG 368

Query: 51  EFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           + G V                P+ VTYT++I GLC+ G V +A++LF +M  + + P+ V
Sbjct: 369 KSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEV 428

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           TY +LI G+C A +  EA  L  +M+++G+ PNVV++  +++ LCK G++D A+ LL  M
Sbjct: 429 TYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            + G++PN   YN L++G C  G + +A +L   M+  G   +  +Y+ +++ YCK  E+
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEM 548

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             A  L   ML KG++P +V +N L  G      +E   +L   M   G+  +   + + 
Sbjct: 549 AKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +   C    +   +E+++ +       D   YN LI G CK+  +K AW L + +     
Sbjct: 609 MKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGF 668

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
                +YN +I       K ++AR LF +M  
Sbjct: 669 SLTAASYNSLIKGFYKRKKFEEARKLFEEMRT 700



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 194/364 (53%), Gaps = 7/364 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPN 59
           +EA  LF KL  +G   +V + N  +  L  +   I  A  +F E +    E GV    N
Sbjct: 198 LEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYS----EVGVCW--N 251

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TV+Y  I+  LC+ G V +A  L ++M+     P+VV+Y+ ++ G+C      +   L  
Sbjct: 252 TVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLME 311

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+  +G++PN  ++N I++ LCK G++ EA ++L +M    + P+  VY TL+ GF  +G
Sbjct: 312 ELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSG 371

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V+   +LF  M+      +  +Y+ +I+G C+  ++  A  L+SEMLSKG+KPD V Y 
Sbjct: 372 NVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYT 431

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G  +  +++ AF L ++M   G+  +   Y   +DGLCK G +  A EL   +   
Sbjct: 432 ALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEK 491

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + ++  YN LI+GLCK G ++ A +L   +       D +TY  ++ A C  G+M KA
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551

Query: 360 RDLF 363
            +L 
Sbjct: 552 HELL 555



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 137/253 (54%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F E  + GV  N VS+N+I++ LC+ GK+ EA  LL  M   G  P+   Y+ ++DG+C
Sbjct: 239 VFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYC 298

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              ++ +  +L   ++  G K N ++Y+ +I+  CK   +  A  +   M ++ I PD V
Sbjct: 299 QVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNV 358

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +Y TL  G  +   V   +KLFDEM+R  +  D   Y + I GLC+ G +VEA +LF  +
Sbjct: 359 VYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEM 418

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D   Y  LIDG CK+G +K A+ L   +    L  +VVTY  ++  LC  G++
Sbjct: 419 LSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEV 478

Query: 357 DKARDLFLDMEAK 369
           D A +L  +M  K
Sbjct: 479 DIANELLHEMSEK 491



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 132/258 (51%), Gaps = 6/258 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G +PNV TYN LINGLC+ G+   A+ L EEM +  G F     P+T+T
Sbjct: 481 ANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM-DLAGFF-----PDTIT 534

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTTI+D  CK G + KA EL   M D+ + P +VT+N L++GFC +    + + L   M+
Sbjct: 535 YTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWML 594

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ PN  +FN +M + C    M     + + M   GV P+   YN L+ G C    + 
Sbjct: 595 DKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMK 654

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M   G      SY+ LI G+ K K+ E A  L+ EM + G   +  IY+   
Sbjct: 655 EAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714

Query: 243 IGLFEIHQVERAFKLFDE 260
              +E    E   +L DE
Sbjct: 715 DVNYEEGNWENTLELCDE 732



 Score = 41.2 bits (95), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 3/141 (2%)

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVE 288
           G  P  ++++  F  L E   +  A KLFD++  +GV     +   F+  L  +   I  
Sbjct: 178 GAHP--LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRT 235

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  +FR    +    +  +YN ++  LC+ G++K A  L   +     + DVV+Y++++ 
Sbjct: 236 AFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVD 295

Query: 349 ALCADGKMDKARDLFLDMEAK 369
             C   ++ K   L  +++ K
Sbjct: 296 GYCQVEQLGKVLKLMEELQRK 316


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/394 (32%), Positives = 199/394 (50%), Gaps = 44/394 (11%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTII 67
           K+   G +  V+ Y++LI+G C+ G    A +LF+EM ANG        KPN V YT++I
Sbjct: 415 KMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG-------LKPNVVIYTSLI 467

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            G CKEG +  A  L+ +M  + I+PN  T+ +LI G C+AN   EA  LF EM++  V 
Sbjct: 468 SGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVI 527

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PN V++NV++   CK G    A  LL+ M++ G+ P+ + Y  L+ G C TGRV+ A E 
Sbjct: 528 PNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREF 587

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF- 246
              ++    K N   +S L++GYCK   ++ AL    EML +G+  D+V Y+ L  G+  
Sbjct: 588 MNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILR 647

Query: 247 ------------EIHQ----------------------VERAFKLFDEMQRHGVAADTWA 272
                       ++H                       ++ AF L+D M   G   +   
Sbjct: 648 QQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVT 707

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+GLCK G + +A  L R +       +   Y C +D L   G ++ A +L   L 
Sbjct: 708 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLL 767

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G L A+ VTYNI+I   C  G++ +A ++ ++M
Sbjct: 768 EGFL-ANTVTYNILIRGFCKLGRIQEAAEVLVNM 800



 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 199/404 (49%), Gaps = 43/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   L   G   +V TY TL+ GLC+    +      EEM N   EFG V  P+  
Sbjct: 268 EAVEIKNLLSYKGLRADVGTYCTLVLGLCK----VEEFEAGEEMMNEMIEFGFV--PSEA 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             + ++DGL K+G +  A +L  K+K   + P++  YN+LI+  C     +EA+ LF  M
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN V+++++++  CK GK+D A   L  M ++G++   + Y++L+ G C  G++
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ LF  M + G K NV  Y+ LI+GYCK  E+  A  LY EM  KGI P+   +  L
Sbjct: 442 RAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTAL 501

Query: 242 FIGL-------------------------------FEIHQVE----RAFKLFDEMQRHGV 266
             GL                                E H  E    RAF+L DEM   G+
Sbjct: 502 ISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGL 561

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             DT+ YR  I GLC  G + EA E    L+  + +L+   ++ L+ G CK GRL  A +
Sbjct: 562 VPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALD 621

Query: 327 LFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             R  L RGV + D+V Y+++I+ +          DL   M  +
Sbjct: 622 ACREMLGRGVAM-DLVCYSVLIYGILRQQDRRSIIDLLKQMHDQ 664



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 194/369 (52%), Gaps = 6/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  +  ++   GC+ +V TYN  I GLC+      A+    E+ N     G+  + + 
Sbjct: 232 IRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV----EIKNLLSYKGL--RADV 285

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++ GLCK    +  +E+  +M +    P+    ++L+ G     +   A  L  +
Sbjct: 286 GTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNK 345

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   GV P++  +N ++N +CK+GK+DEA  L   M   G+ PN   Y+ L+D FC  G+
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGK 405

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A      M  +G K  V+ YS LI+G+CK  ++  A SL+ EM++ G+KP+VVIY +
Sbjct: 406 LDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTS 465

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  ++  AF+L+ EM   G++ +T+ +   I GLC    + EA +LF  +    
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   YN LI+G CK G    A+EL   +    L+ D  TY  +I  LC+ G++ +AR
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 361 DLFLDMEAK 369
           +   D++ +
Sbjct: 586 EFMNDLQGE 594



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 127/403 (31%), Positives = 188/403 (46%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  K++ FG  P++F YN LIN +C+ G    A +LF  M +  G F     PN V
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGH-KGLF-----PNDV 391

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +ID  CK G +D A     KM +  I   V  Y+SLI G C       AK LF EM
Sbjct: 392 TYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM 451

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++PNVV +  +++  CK G++  A RL   M   G+ PN + +  L+ G C   R+
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M       N  +Y++LI G+CK      A  L  EM+ KG+ PD   Y  L
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL----- 296
             GL    +V  A +  +++Q      +   +   + G CK G + +A++  R +     
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631

Query: 297 -------RILKY----ELDIRA-------------------YNCLIDGLCKSGRLKIAWE 326
                   +L Y    + D R+                   Y  +ID   K+G LK+A+ 
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+  +     + +VVTY  +I+ LC  G MDKA  L  +M A 
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS 734



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/366 (33%), Positives = 187/366 (51%), Gaps = 9/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++  +   PN  TYN LI G C+ G+T+ A  L +EM     E G+V  P+T 
Sbjct: 513 EANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMV----EKGLV--PDTY 566

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLC  G V +A+E    ++ E    N + +++L+HG+C     ++A     EM
Sbjct: 567 TYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREM 626

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV  ++V ++V++  + +         LL+ M   G+RP+  +Y T++D     G +
Sbjct: 627 LGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNL 686

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M S GC  NV +Y+ LING CK   ++ A  L  EML+    P+   Y   
Sbjct: 687 KMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACF 746

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L     +E+A +L D +   G  A+T  Y   I G CK G I EA E+   +     
Sbjct: 747 LDYLTSEGNIEKAIQLHDVLL-EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 805

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             D  +Y+ +I   C+ G LK A +L+ S L RGV   D V YN +I+  C  G++ KA 
Sbjct: 806 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV-NPDTVAYNFLIYGCCVTGELTKAF 864

Query: 361 DLFLDM 366
           +L  DM
Sbjct: 865 ELRDDM 870



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 141/268 (52%), Gaps = 7/268 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   ++  Y+ LI G+ R       ++L ++M +         +P+ V YTT+ID   K 
Sbjct: 630 GVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQG------LRPDNVLYTTMIDANAKA 683

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A  L+  M  E   PNVVTY +LI+G C     ++A+ L  EM+     PN  ++
Sbjct: 684 GNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTY 743

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
              ++ L   G +++A +L +++++ G   N   YN L+ GFC  GR+  A E+ V+M  
Sbjct: 744 ACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMID 802

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  SYS +I  YC+  +++ A+ L+  ML++G+ PD V YN L  G     ++ +
Sbjct: 803 SGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTK 862

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           AF+L D+M R GV  +   Y + I G C
Sbjct: 863 AFELRDDMMRRGVKPNRATYNSLIHGTC 890



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 126/239 (52%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MMD G+ P + + + ++N L +  +   A  L + ++  G+RP+ +VY  ++   C    
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             RA E+   MES GC  +V +Y++ I G CKN+ +  A+ + + +  KG++ DV  Y T
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L +GL ++ + E   ++ +EM   G      A    +DGL K G I  A +L   ++   
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  YN LI+ +CK G+L  A  LF ++    L  + VTY+I+I + C  GK+D A
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 144/312 (46%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P   T + +++GL +      A  LF ++    + P+V  Y +++   C   D+  A+ +
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   G   +V ++NV +  LCKN ++ EA  +  L+   G+R +   Y TL+ G C 
Sbjct: 238 IGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCK 297

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
                  EE+   M   G   +  + S L++G  K   I  A  L +++   G+ P + +
Sbjct: 298 VEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFV 357

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L   + +  +++ A  LF+ M   G+  +   Y   ID  CK G +  A+     + 
Sbjct: 358 YNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMT 417

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +  +  +  Y+ LI G CK G+L+ A  LF  +    L  +VV Y  +I   C +G++ 
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 358 KARDLFLDMEAK 369
            A  L+ +M  K
Sbjct: 478 NAFRLYHEMTGK 489



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 132/283 (46%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M D  I P + T + +++G      +  A  LF E++  G++P+V  +  ++  LC+   
Sbjct: 171 MMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKD 230

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
              A  ++  M   G   +   YN  + G C   RV  A E+   +   G + +V +Y  
Sbjct: 231 FIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCT 290

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L+ G CK +E E    + +EM+  G  P     + L  GL +   +  AF L +++++ G
Sbjct: 291 LVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFG 350

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           VA   + Y   I+ +CK+G + EA  LF  +       +   Y+ LID  CK G+L +A 
Sbjct: 351 VAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVAL 410

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
                +    + A V  Y+ +I   C  GK+  A+ LF +M A
Sbjct: 411 HFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 28/201 (13%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM--------------------ANGNGEFG 53
           GC PNV TY  LINGLC+ G    A  L  EM                    + GN E  
Sbjct: 700 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 759

Query: 54  VVCK--------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           +            NTVTY  +I G CK G + +A E+ + M D  I+P+ ++Y+++I+ +
Sbjct: 760 IQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEY 819

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C   D  EA  L+  M+++GV P+ V++N ++   C  G++ +A  L + M++ GV+PN 
Sbjct: 820 CRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNR 879

Query: 166 FVYNTLMDGFCLTGRVNRAEE 186
             YN+L+ G CL   V+   +
Sbjct: 880 ATYNSLIHGTCLMSSVSSTAD 900



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 75/167 (44%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
              + +LI  Y +N+     L +   M+  GI P +   + +  GL  I Q   A  LFD
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           E+   G+  D + Y   +  LC+    + A E+   +     +L +  YN  I GLCK+ 
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           R+  A E+   L    L ADV TY  ++  LC   + +   ++  +M
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311


>gi|42567170|ref|NP_194410.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332659854|gb|AEE85254.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 369

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 194/356 (54%), Gaps = 6/356 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
            +K+   G EP++ T ++L+NG C +     A+ +  +M     + G+  K + V  T +
Sbjct: 1   MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME----KMGI--KRDVVVDTIL 54

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           ID LCK   V  A E+  +MKD  I+PNVVTY+SLI G C +    +A+    EM  + +
Sbjct: 55  IDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 114

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            PNV++F+ +++   K GK+ +   + ++MIQ+ + PN F Y++L+ G C+  RV+ A +
Sbjct: 115 NPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIK 174

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +   M S GC  NV +YS L NG+ K+  ++  + L  +M  +G+  + V  NTL  G F
Sbjct: 175 MLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYF 234

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  +++ A  +F  M  +G+  +  +Y   + GL  NG + +A+  F  ++  + +LDI 
Sbjct: 235 QAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDII 294

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            Y  +I G+CK+  +K A++LF  L    +  D   Y IMI  L   G   +A  L
Sbjct: 295 TYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 169/313 (53%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P+ VT +++++G C    +  A  +  +M+   I  +VV    LI   C       A  
Sbjct: 10  EPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALE 69

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +   M D+G+ PNVV+++ ++  LCK+G++ +A R L  M    + PN   ++ L+D + 
Sbjct: 70  VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G++++ + ++  M  M    NVF+YS LI G C +  ++ A+ +   M+SKG  P+VV
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y+TL  G F+  +V+   KL D+M + GVAA+T +  T I G  + G I  A+ +F  +
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  +IR+YN ++ GL  +G ++ A   F  + +     D++TY IMIH +C    +
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309

Query: 357 DKARDLFLDMEAK 369
            +A DLF  ++ K
Sbjct: 310 KEAYDLFYKLKFK 322



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 153/294 (52%), Gaps = 6/294 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  +  +++  G  PNV TY++LI GLC++G    A     EM +          PN 
Sbjct: 65  VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK------INPNV 118

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T++ +ID   K G + K   ++  M   +I+PNV TY+SLI+G C  N  +EA  +   
Sbjct: 119 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PNVV+++ + N   K+ ++D+  +LL+ M Q GV  N    NTL+ G+   G+
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +F  M S G   N+ SY+I++ G   N E+E ALS +  M       D++ Y  
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 298

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +  G+ +   V+ A+ LF +++   V  D  AY   I  L + G   EA  L R
Sbjct: 299 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 352



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 107/214 (50%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+++G+ P+    ++L++GFCL+  +  A  +   ME MG K +V   +ILI+  CKN+ 
Sbjct: 4   MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  AL +   M  +GI P+VV Y++L  GL +  ++  A +   EM    +  +   +  
Sbjct: 64  VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            ID   K G + +   +++ +  +  + ++  Y+ LI GLC   R+  A ++   +    
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +VVTY+ + +      ++D    L  DM  +
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 217



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 73/139 (52%)

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M+  GI+PD+V  ++L  G    + ++ A  +  +M++ G+  D       ID LCKN 
Sbjct: 3   KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +V A+E+ + ++      ++  Y+ LI GLCKSGRL  A      +    +  +V+T++
Sbjct: 63  LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122

Query: 345 IMIHALCADGKMDKARDLF 363
            +I A    GK+ K   ++
Sbjct: 123 ALIDAYAKRGKLSKVDSVY 141



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 55/110 (50%)

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M + G+  D     + ++G C +  I +AV +   +  +  + D+     LID LCK+ 
Sbjct: 3   KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  A E+ + +    +  +VVTY+ +I  LC  G++  A     +M++K
Sbjct: 63  LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK 112


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 194/397 (48%), Gaps = 37/397 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++   C PNV TY TL+NGL + G    A  +F EM   N      C P+ +
Sbjct: 340 EACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENN------CSPDAI 393

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+IDGL K G  D A  LF +MKD  + PN+ TYN +I     A    EA  LF ++
Sbjct: 394 AYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL 453

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR------PNA---------- 165
            +QG  P+V ++N +++ L K G+MD+   +++ M++ G         NA          
Sbjct: 454 KEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGAD 513

Query: 166 ---------------FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
                            YNTLM  F   G V+ A +L   M+   C   V +Y+ L++G 
Sbjct: 514 RTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGL 573

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K   ++ A+SL  EM  +G +P VV Y++L    ++  Q E +  LFDEM R G  AD 
Sbjct: 574 GKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADV 633

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I+ LCK+  + +A+++F  ++    E  +  Y  L+  L K  ++  A ++F  
Sbjct: 634 STYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNE 693

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L    L+ D   YNIM++ L    ++D+A  L   M+
Sbjct: 694 LQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMK 730



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 196/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  ++   GCEP+V TY++L+    +      +L+LF+EM          C  +  
Sbjct: 581 EAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKG------CVADVS 634

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+ LCK   VD+A ++F +MK+E + P +  Y +L+         + A  +F E+
Sbjct: 635 TYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNEL 694

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  + P+   +N+++N L K+ ++DEA +L++ M    + P+ F Y +L+DG   +GR+
Sbjct: 695 QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRL 754

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M   G + +V +Y+ L++   K  ++  AL ++  M  K   PDVV Y++L
Sbjct: 755 EEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSL 814

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +VE A+  F+     G   +   Y + ID   K G +  A+ELF  ++  + 
Sbjct: 815 IDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQC 874

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  YN L+ GL K+GRL +A +L   + +   + D+VTYNI+I  +   G +D+A  
Sbjct: 875 PPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAES 934

Query: 362 LFLDMEAK 369
            F  M+ K
Sbjct: 935 YFKRMKEK 942



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 192/368 (52%), Gaps = 6/368 (1%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  +F +++  G EP +  Y TL++ L +      AL +F E+   +        P+T 
Sbjct: 651  QALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESS------LVPDTF 704

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             Y  +++GL K   VD+A +L   MK++NI P++ TY SL+ G   +    EA  +F +M
Sbjct: 705  VYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKM 764

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G +P+VV++  +M+ L K GK+  A  +   M +    P+   Y++L+D     GRV
Sbjct: 765  TEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRV 824

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              A   F +  S GC  NV  YS LI+ + K   ++ AL L+ EM  +   P++V YN L
Sbjct: 825  EEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNL 884

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              GL +  ++  A KL +EM++ G   D   Y   IDG+ K G + EA   F+ ++    
Sbjct: 885  LSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGI 944

Query: 302  ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              D+  +  LI+ L K  +L  A ELF S+        VVTYN++I  L   GK+ +A  
Sbjct: 945  VPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAM 1004

Query: 362  LFLDMEAK 369
            +F +M+ K
Sbjct: 1005 IFHEMKVK 1012



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 188/351 (53%), Gaps = 8/351 (2%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
            TYNTL++     GH   A+ L E M          C P  VTYTT++DGL K G +D+A
Sbjct: 529 ITYNTLMSAFIHNGHVDEAVKLLEVMKKHE------CIPTVVTYTTLVDGLGKAGRLDEA 582

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
             L  +M+ +   P+VVTY+SL+  F   +   E+  LF EM+ +G   +V ++++++N 
Sbjct: 583 VSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINC 642

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LCK+  +D+A  +   M + G+ P    Y TL+       +++ A ++F  ++      +
Sbjct: 643 LCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPD 702

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
            F Y+I++NG  K+  ++ A  L   M ++ I PD+  Y +L  GL +  ++E AF +F 
Sbjct: 703 TFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFT 762

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M   G   D  AY + +D L K G +  A+ +FR +   +   D+  Y+ LID L K G
Sbjct: 763 KMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEG 822

Query: 320 RLKIAWELFR-SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R++ A+  F  S+ +G    +V  Y+ +I +    G +D+A +LF +M+ +
Sbjct: 823 RVEEAYYFFENSISKGC-TPNVGVYSSLIDSFGKKGMVDRALELFEEMQRR 872



 Score =  184 bits (466), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 110/344 (31%), Positives = 177/344 (51%), Gaps = 6/344 (1%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  +F +L+     P+ F YN ++NGL ++     A  L + M N N        P+  T
Sbjct: 687  ALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQN------ILPDLFT 740

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            YT+++DGL K G +++A  +F KM +E   P+VV Y SL+         + A  +F  M 
Sbjct: 741  YTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMA 800

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             +   P+VV+++ +++ L K G+++EA    E  I  G  PN  VY++L+D F   G V+
Sbjct: 801  KKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVD 860

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            RA ELF  M+   C  N+ +Y+ L++G  K   +  A  L  EM   G  PD+V YN L 
Sbjct: 861  RALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILI 920

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             G+ ++  V+ A   F  M+  G+  D   + + I+ L K   ++EA ELF ++    Y 
Sbjct: 921  DGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYN 980

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
              +  YN LID L ++G++  A  +F  +     + D +T  IM
Sbjct: 981  PSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/434 (28%), Positives = 203/434 (46%), Gaps = 72/434 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F++++   C P+   YNTLI+GL + G   +A  LF+EM +     G+V  PN  
Sbjct: 375 EACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKD----RGLV--PNLR 428

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  L K G   +A +LF  +K++   P+V TYN+LI         ++   +  EM
Sbjct: 429 TYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEM 488

Query: 122 MDQGVQ------------------------PNV-------VSFNVIMNELCKNGKMDEAS 150
           +++G +                        P++       +++N +M+    NG +DEA 
Sbjct: 489 VEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAV 548

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +LLE+M +    P    Y TL+DG    GR++ A  L   ME  GC+ +V +YS L+  +
Sbjct: 549 KLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASF 608

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYN------------------------------- 239
            K  + E +LSL+ EM+ KG   DV  Y+                               
Sbjct: 609 YKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLL 668

Query: 240 ----TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
               TL   L +  +++ A ++F+E+Q   +  DT+ Y   ++GL K+  + EA +L  +
Sbjct: 669 GNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDS 728

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      D+  Y  L+DGL KSGRL+ A+ +F  +       DVV Y  ++  L   GK
Sbjct: 729 MKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGK 788

Query: 356 MDKARDLFLDMEAK 369
           +  A  +F  M  K
Sbjct: 789 LSHALIIFRAMAKK 802



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 184/398 (46%), Gaps = 37/398 (9%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F +++ FGC P+   YN ++  L + G    A+ +F ++    G+F +  +P+  T
Sbjct: 236 ALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL----GQFRI--QPDAQT 289

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +   +    + G +D A E   +M    I+P V T+  LI     + + +EA   F  M 
Sbjct: 290 FRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMK 349

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +    PNVV++  ++N L K G+++EA  +   M +    P+A  YNTL+DG    G  +
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEAD 409

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  M+  G   N+ +Y+I+I+   K      A  L+ ++  +G  PDV  YNTL 
Sbjct: 410 MACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLI 469

Query: 243 IGLFEIHQVERAFKLFDEMQRHG----VAADTWA-------------------------- 272
             L +  Q+++   +  EM   G    ++ D+ A                          
Sbjct: 470 DVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEI 529

Query: 273 -YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y T +     NG++ EAV+L   ++  +    +  Y  L+DGL K+GRL  A  L R +
Sbjct: 530 TYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +      VVTY+ ++ +     + +++  LF +M  K
Sbjct: 590 EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRK 627



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 147/308 (47%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I  L      D   ++   M  E    ++    SL+  F   N+ + A  +F +M
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+   +N ++  L K G    A  +   + Q  ++P+A  +   +  F  +GR+
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E    M   G    V ++++LI+   K+  I+ A   ++ M +    P+VV Y TL
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E A ++F EM+ +  + D  AY T IDGL K G    A  LF+ ++    
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++R YN +I  L K+GR   AW+LF  L     + DV TYN +I  L   G+MDK   
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 362 LFLDMEAK 369
           +  +M  K
Sbjct: 484 IIKEMVEK 491



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 131/296 (44%), Gaps = 36/296 (12%)

Query: 110 DWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           D + AKC F     Q G    V ++ +++  L    + D   ++L  M + G R +  + 
Sbjct: 161 DLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLL 220

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGC-------------------------------- 196
            +L+  F  T  V+ A E+F  M+S GC                                
Sbjct: 221 TSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ 280

Query: 197 ---KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              + +  ++ I ++ + ++  ++ A     EM+  GI P V  +  L   L +   ++ 
Sbjct: 281 FRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDE 340

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K F+ M+    + +   Y T ++GL K G + EA E+F  ++      D  AYN LID
Sbjct: 341 ACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLID 400

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL K+G   +A  LF+ +    L+ ++ TYNIMI  L   G+  +A  LF D++ +
Sbjct: 401 GLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQ 456


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/430 (29%), Positives = 199/430 (46%), Gaps = 64/430 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------F 52
           EA  L + + + G  P+V +Y+T++NG CR G       L E M     +          
Sbjct: 264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 323

Query: 53  GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           G++C+                    P+TV YTT+IDG CK G +  A + F +M   +I 
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+V+TY ++I GFC   D  EA  LF EM  +G++P+ V+F  ++N  CK G M +A R+
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING--- 209
              MIQ G  PN   Y TL+DG C  G ++ A EL   M  +G + N+F+Y+ ++NG   
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503

Query: 210 --------------------------------YCKNKEIEGALSLYSEMLSKGIKPDVVI 237
                                           YCK+ E++ A  +  EML KG++P +V 
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N L  G      +E   KL + M   G+A +   + + +   C    +  A  +++ + 
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D + Y  L+ G CK+  +K AW LF+ +        V TY+++I       K  
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683

Query: 358 KARDLFLDME 367
           +AR++F  M 
Sbjct: 684 EAREVFDQMR 693



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 6/297 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++   G EP+  T+  LING C+ GH   A  +   M          C PN 
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------CSPNV 456

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYTT+IDGLCKEG +D A EL  +M    + PN+ TYNS+++G C + +  EA  L  E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               G+  + V++  +M+  CK+G+MD+A  +L+ M+  G++P    +N LM+GFCL G 
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +   E+L   M + G   N  +++ L+  YC    ++ A ++Y +M S+G+ PD   Y  
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           L  G  +   ++ A+ LF EM+  G +     Y   I G  K    +EA E+F  +R
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 198/369 (53%), Gaps = 7/369 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKPNT 60
           EA  +F K+  +G   +V + N  +  L +  + T  A+ +F E      E GV    N 
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP----EVGVCW--NV 246

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  +I  +C+ G + +A  L L M+ +   P+V++Y+++++G+C   + ++   L   
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN   +  I+  LC+  K+ EA      MI+ G+ P+  VY TL+DGFC  G 
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A + F  M S     +V +Y+ +I+G+C+  ++  A  L+ EM  KG++PD V +  
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   ++ AF++ + M + G + +   Y T IDGLCK G +  A EL   +  + 
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +I  YN +++GLCKSG ++ A +L        L AD VTY  ++ A C  G+MDKA+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546

Query: 361 DLFLDMEAK 369
           ++  +M  K
Sbjct: 547 EILKEMLGK 555



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 178/337 (52%), Gaps = 6/337 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+  F ++      P+V TY  +I+G C+ G  + A  LF EM      F    +P++VT
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM------FCKGLEPDSVT 423

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T +I+G CK G +  A  +   M     +PNVVTY +LI G C   D + A  L  EM 
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+QPN+ ++N I+N LCK+G ++EA +L+      G+  +   Y TLMD +C +G ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A+E+   M   G +  + ++++L+NG+C +  +E    L + ML+KGI P+   +N+L 
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                 + ++ A  ++ +M   GV  D   Y   + G CK   + EA  LF+ ++   + 
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           + +  Y+ LI G  K  +   A E+F  + R  L AD
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 90/265 (33%), Positives = 153/265 (57%), Gaps = 6/265 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNV TY TLI+GLC+ G    A  L  EM      + +  +PN  TY +I++GLCK 
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEM------WKIGLQPNIFTYNSIVNGLCKS 504

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A +L  + +   +N + VTY +L+  +C + + ++A+ +  EM+ +G+QP +V+F
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           NV+MN  C +G +++  +LL  M+  G+ PNA  +N+L+  +C+   +  A  ++  M S
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y  L+ G+CK + ++ A  L+ EM  KG    V  Y+ L  G  +  +   
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684

Query: 254 AFKLFDEMQRHGVAADTWAYRTFID 278
           A ++FD+M+R G+AAD   +  F D
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSD 709



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  PN  T+N+L+   C   +   A  ++++M + G G       P+  TY  ++ G CK
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCK 643

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              + +A  LF +MK +  + +V TY+ LI GF     + EA+ +F +M  +G+  +   
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703

Query: 133 FNVIMNELCKNGKMD 147
           F+   +   K  + D
Sbjct: 704 FDFFSDTKYKGKRPD 718


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 192/368 (52%), Gaps = 9/368 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF +    G  P++ T + LIN  C   H  +A ++F  +            P+ +T  
Sbjct: 79  SLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFH------PDAITLN 132

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC  G + K      ++  +    + V+Y +LI+G C A +      L  ++   
Sbjct: 133 TLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH 192

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P+VV +N I+N LCKN  + +A  +   MI  G+ P+   Y TL+ GFC+ G++  A
Sbjct: 193 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEA 252

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCK---NKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             L   M+      +V+++S+LI+   K    K ++ A+SL+ EM  K + PD+V YN+L
Sbjct: 253 FSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSL 312

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + H +ERA  L  EM+ HG+  D ++Y   +DGLCK G +  A E F+ L +   
Sbjct: 313 IDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGC 372

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L++  YN +I+GLCK+G    A +L   +     + + +T+  +I AL    + DKA  
Sbjct: 373 HLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEK 432

Query: 362 LFLDMEAK 369
           +  +M A+
Sbjct: 433 ILREMIAR 440



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 161/350 (46%), Gaps = 38/350 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P T  +  I+  L K         LF + +   I P++ T + LI+ FC+      A  +
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSV 115

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G  P+ ++ N ++  LC  G++ +     + ++  G + +   Y TL++G C 
Sbjct: 116 FANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCK 175

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G       L   +E    K +V  Y+ +IN  CKNK +  A  +YSEM+ KGI PDVV 
Sbjct: 176 AGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVT 235

Query: 238 YNTLFIGL---------------------------FEI-----------HQVERAFKLFD 259
           Y TL  G                            F +             V+ A  LF+
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFE 295

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           EM+   +  D   Y + IDGLCKN ++  A+ L + ++    + D+ +Y  L+DGLCK G
Sbjct: 296 EMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGG 355

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           RL+IA E F+ L       +V  YN+MI+ LC  G   +A DL   ME K
Sbjct: 356 RLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGK 405



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 152/293 (51%), Gaps = 9/293 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++F  +   G  P+  T NTLI GLC  G     L   +++     +       + V+
Sbjct: 112 AFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQL------DQVS 165

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+GLCK G       L  K++  ++ P+VV YN++I+  C      +A  ++ EM+
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMI 225

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR-- 180
            +G+ P+VV++  +++  C  GKM EA  LL  M    + P+ + ++ L+D     G+  
Sbjct: 226 VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKK 285

Query: 181 -VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V+ A  LF  M+      ++ +Y+ LI+G CKN  +E A++L  EM   GI+PDV  Y 
Sbjct: 286 MVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYT 345

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            L  GL +  ++E A + F  +   G   + W Y   I+GLCK G   EA++L
Sbjct: 346 ILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDL 398



 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 145/266 (54%), Gaps = 9/266 (3%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           A L  KL     +P+V  YNT+IN LC+      A +++ EM            P+ VTY
Sbjct: 183 ARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKG------ISPDVVTY 236

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW---NEAKCLFIE 120
           TT+I G C  G + +A  L  +MK +NINP+V T++ LI            +EA  LF E
Sbjct: 237 TTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEE 296

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + + P++V++N +++ LCKN  ++ A  LL+ M + G++P+ + Y  L+DG C  GR
Sbjct: 297 MKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGR 356

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A+E F  +   GC  NV+ Y+++ING CK      A+ L S+M  KG  P+ + + T
Sbjct: 357 LEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRT 416

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV 266
           +   L E  + ++A K+  EM   G+
Sbjct: 417 IICALSEKDENDKAEKILREMIARGL 442



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 126/233 (54%), Gaps = 9/233 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++ ++ V G  P+V TY TLI+G C  G    A +L  EM   N        P+  
Sbjct: 216 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKN------INPDVY 269

Query: 62  TYTTIIDGLCKEG---FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           T++ +ID L KEG    VD+A  LF +MK +N+ P++VTYNSLI G C  +    A  L 
Sbjct: 270 TFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALL 329

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM + G+QP+V S+ ++++ LCK G+++ A    + ++  G   N + YN +++G C  
Sbjct: 330 KEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKA 389

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           G    A +L   ME  GC  N  ++  +I    +  E + A  +  EM+++G+
Sbjct: 390 GLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 104/215 (48%)

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           LM+ +   P  F++N ++       R      LF   E  G   ++ + SILIN +C   
Sbjct: 48  LMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQA 107

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            I  A S+++ +L +G  PD +  NTL  GL    ++++     D++   G   D  +Y 
Sbjct: 108 HITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYG 167

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I+GLCK G       L R L     + D+  YN +I+ LCK+  L  A +++  +   
Sbjct: 168 TLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK 227

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  DVVTY  +IH  C  GKM +A  L  +M+ K
Sbjct: 228 GISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLK 262


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 194/360 (53%), Gaps = 6/360 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A F  L  FG   + FTY +LI G C+      A  +FE M          C  N V+
Sbjct: 209 AKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEG------CLRNEVS 262

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I G C+ G +D+A ELF +MK++   P+V TY  L+  FC      EA   F EM+
Sbjct: 263 YTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMV 322

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G++PNV ++ V+++  CK GKMDE   +L  M++ G+  +   +N L+DG+C  G + 
Sbjct: 323 ENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMME 382

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +  SM+      N  +Y+ LI G+C+ K ++ A++L ++M    + P++V YNTL 
Sbjct: 383 DAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLI 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   V+ A++L   M + G   D   +  FID LCK G + +A ++F +L+    E
Sbjct: 443 HGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAE 502

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   Y  LIDG CK+ +   A  LF+ +       + +T+N+++  L  +GK++ A  L
Sbjct: 503 ANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSL 562



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 176/353 (49%), Gaps = 8/353 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           +V +YN L   L R G  I  LN LF++M N   E      PN +++ T+++  CK G V
Sbjct: 154 SVTSYNRLFMVLSRFG-LIDELNCLFKDMLNDGVE------PNLISFNTMVNAHCKIGNV 206

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             AK  F  +       +  TY SLI G+C  ++  +A  +F  M  +G   N VS+  +
Sbjct: 207 VVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNL 266

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  C+ GK+DEA  L   M + G  P+   Y  L+  FC  G+   A + F  M   G 
Sbjct: 267 IHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGI 326

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV++Y++LI+ +CK  +++  + + S ML KG+   VV +N L  G  +   +E A  
Sbjct: 327 EPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAIC 386

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + D M+ + V  ++  Y   I G C+   +  A+ L   +   K   ++  YN LI GLC
Sbjct: 387 VLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLC 446

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K+  +  AW L   + +   + D  T+   I  LC  GK+++A  +F  ++ K
Sbjct: 447 KARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEK 499



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 164/353 (46%), Gaps = 29/353 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG---------HTIVALNLFEEMANGNGEF 52
           EA   F ++   G EPNV+TY  LI+  C+ G          T++   L   +   N   
Sbjct: 313 EALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALI 372

Query: 53  GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                    PN+ TY  +I G C++  +D+A  L  KM +  ++
Sbjct: 373 DGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLS 432

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN+VTYN+LIHG C A   + A  L   M+  G  P+  +F   ++ LCK GK+++A ++
Sbjct: 433 PNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQV 492

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E + +     N F+Y  L+DG+C   + + A  LF  M   GC  N  ++++L++G  K
Sbjct: 493 FESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRK 552

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++E A+SL   M     KP V  Y  L   +      +RA    D+M   G   +   
Sbjct: 553 EGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVT 612

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           Y  FI   C+ G ++EA E+   ++     LD   Y+ L++     G+L  A+
Sbjct: 613 YTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAF 665



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 180/387 (46%), Gaps = 32/387 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  L+    E N F Y  LI+G C+      A  LF+ M          C PN++
Sbjct: 488 QAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEG------CFPNSI 541

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++DGL KEG V+ A  L   M   +  P V TY  LI      +D++ A     +M
Sbjct: 542 TFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQM 601

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G QPNVV++   +   C+ G++ EA  ++  + + G+  ++F+Y+ L++ +   G++
Sbjct: 602 ISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQL 661

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNK--------------------------E 215
           + A  + + M   GC+ +  +YSIL+      K                          +
Sbjct: 662 DSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIAD 721

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            E    L+ +M+ +G  P+V  Y+ L  GL ++  +  AF+LF+ M+  G++     + +
Sbjct: 722 FEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNS 781

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            +   CK G   EA+ L  ++    +   + +Y  L+ GL + G  + A E+FRSL    
Sbjct: 782 LLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCG 841

Query: 336 LIADVVTYNIMIHALCADGKMDKARDL 362
              D V + +++  L   G +D+   L
Sbjct: 842 YNYDEVVWKVLLDGLVRKGYVDECSQL 868



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 177/390 (45%), Gaps = 32/390 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A AL  K+      PN+ TYNTLI+GLC+      A  L   M       G V  P+  T
Sbjct: 419 AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKD----GFV--PDQRT 472

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +   ID LCK G V++A ++F  +K+++   N   Y +LI G+C A  +++A  LF  M+
Sbjct: 473 FCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRML 532

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN ++FNV+++ L K GK+++A  L+++M +   +P    Y  L++        +
Sbjct: 533 FEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFD 592

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           RA      M S GC+ NV +Y+  I  YC+   +  A  +  ++  +GI  D  IY+ L 
Sbjct: 593 RANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLV 652

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE-----------AVE 291
                I Q++ AF +   M   G       Y   +  L    Y  E           +V+
Sbjct: 653 NAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVD 712

Query: 292 LFRTLRILKYEL---------------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
                +I  +E+               ++  Y+ LI GLCK   L +A+ LF  +    +
Sbjct: 713 NANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGI 772

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
                 +N ++ + C  G  ++A  L   M
Sbjct: 773 SPSENIHNSLLSSCCKLGMHEEALRLLDSM 802



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 122/278 (43%), Gaps = 32/278 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+PNV TY   I   CR G  + A    EEM     E G++   ++  Y  +++     
Sbjct: 605 GCQPNVVTYTAFIKAYCRQGRLLEA----EEMVVKIKEEGILL--DSFIYDVLVNAYGCI 658

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY---------------------ANDWN 112
           G +D A  + ++M D    P+  TY+ L+    +                     AN W 
Sbjct: 659 GQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWK 718

Query: 113 EA-----KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
            A       LF +M++QG  PNV +++ ++  LCK   +  A RL   M + G+ P+  +
Sbjct: 719 IADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENI 778

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           +N+L+   C  G    A  L  SM       ++ SY +L+ G  +    E A  ++  +L
Sbjct: 779 HNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLL 838

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           S G   D V++  L  GL     V+   +L D M++ G
Sbjct: 839 SCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTG 876



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 105/222 (47%)

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA  +L L+       +   YN L       G ++    LF  M + G + N+ S++ ++
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMV 197

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           N +CK   +  A + +  ++  G   D   Y +L +G  +IH++  A+K+F+ M + G  
Sbjct: 198 NAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCL 257

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +  +Y   I G C+ G I EA+ELF  ++      D+  Y  L+   C+ G+   A + 
Sbjct: 258 RNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKF 317

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F  +    +  +V TY ++I   C  GKMD+  ++   M  K
Sbjct: 318 FEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK 359



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 105/225 (46%), Gaps = 22/225 (9%)

Query: 4   AALFMKLRVF--GCEPNVFTYNTLINGLC-------RTGHTIVALNLFEEMAN--GNGEF 52
           +A  + +R+F  GCEP+  TY+ L+  L          G  + + N+  + AN     +F
Sbjct: 663 SAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADF 722

Query: 53  GVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
            ++           C PN  TY+ +I GLCK   +  A  LF  MK+  I+P+   +NSL
Sbjct: 723 EIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSL 782

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           +   C      EA  L   MM+     ++ S+ +++  L + G  ++A  +   ++  G 
Sbjct: 783 LSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGY 842

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
             +  V+  L+DG    G V+   +L   ME  GC+ +  ++++L
Sbjct: 843 NYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887


>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680 [Vitis vinifera]
 gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
          Length = 592

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 191/352 (54%), Gaps = 6/352 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A + ++   G  P+V  +N L++ LC+      A  LF E+    G+ G+  +P  V+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI----GKRGL--RPTVVS 262

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+I+G CK G +D+   L   M +  + P+V TY+ LI+G C     ++A  LF+EM 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ PN V+F  ++N  C  G+ D    + + M++ GV+P+   YNTL++G C  G + 
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++L + M   G K + F+Y++LI+G CK  ++E AL +  EM+ +GI+ D V +  L 
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     QV  A +   EM   G+  D   Y   I G CK G +    +L + ++   + 
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHV 502

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             +  YN L++GLCK G++K A  L  ++    ++ D +TYNI++   C  G
Sbjct: 503 PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 172/318 (54%), Gaps = 6/318 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P V ++NTLING C++G+      L   M   N  F     P+  
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMME-NRVF-----PDVF 296

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+GLCKEG +D A +LFL+M D  + PN VT+ +LI+G C     +    ++ +M
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV+P+V+++N ++N LCK G + EA +L+  M Q G++P+ F Y  L+DG C  G +
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+   M   G + +  +++ LI+G+C+  ++  A     EML  GIKPD   Y  +
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V+  FKL  EMQ  G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536

Query: 302 ELDIRAYNCLIDGLCKSG 319
             D   YN L++G CK G
Sbjct: 537 VPDDITYNILLEGHCKHG 554



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 188/367 (51%), Gaps = 7/367 (1%)

Query: 2   EAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            A+++F   L   G   +   ++ L+N    +G+   A+  F  +   N +       ++
Sbjct: 137 SASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF----HS 192

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  + D L K      A   + ++ D    P+V  +N L+H  C  +  NEA+ LF E
Sbjct: 193 CGY--LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGE 250

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G++P VVSFN ++N  CK+G +D+  RL   M++  V P+ F Y+ L++G C  G+
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A +LF+ M   G   N  +++ LING+C     +  + +Y +ML KG+KPDV+ YNT
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++  +  A KL  EM + G+  D + Y   IDG CK G +  A+E+ + +    
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            ELD  A+  LI G C+ G++  A    R +    +  D  TY ++IH  C  G +    
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490

Query: 361 DLFLDME 367
            L  +M+
Sbjct: 491 KLLKEMQ 497



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 173/308 (56%), Gaps = 1/308 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   +  ++  LCKE  +++A+ LF ++    + P VV++N+LI+G+C + + ++   L
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              MM+  V P+V +++V++N LCK G++D+A++L   M   G+ PN   + TL++G C+
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           TGR +   E++  M   G K +V +Y+ LING CK  ++  A  L  EM  +G+KPD   
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G  +   +E A ++  EM + G+  D  A+   I G C+ G ++EA    R + 
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D   Y  +I G CK G +K  ++L + +     +  VVTYN++++ LC  G+M 
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522

Query: 358 KARDLFLD 365
            A ++ LD
Sbjct: 523 NA-NMLLD 529



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 153/283 (54%), Gaps = 11/283 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+++   G  PN  T+ TLING C TG   + + ++++M       GV  KP+ +
Sbjct: 313 DANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK----GV--KPDVI 366

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GLCK G + +AK+L ++M    + P+  TY  LI G C   D   A  +  EM
Sbjct: 367 TYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEM 426

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++ + V+F  +++  C+ G++ EA R L  M++ G++P+   Y  ++ GFC  G V
Sbjct: 427 VKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDV 486

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +L   M+  G    V +Y++L+NG CK  +++ A  L   ML+ G+ PD + YN L
Sbjct: 487 KTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNIL 546

Query: 242 FIGLFEIHQVERAFKLFDEMQRH-GVAADTWAYRTFIDGLCKN 283
             G    H      + FD++Q   G+  D  +Y + I  L K 
Sbjct: 547 LEG----HCKHGNREDFDKLQSEKGLVQDYGSYTSLIGDLRKT 585



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 29/297 (9%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N+NP+ ++  SL+  F     W   +  F        + ++ S+  + + LC +  + EA
Sbjct: 75  NLNPHSLSPPSLLSFF----KWLSTQHHF--------RLSIHSYCTMTHFLCTHKMLSEA 122

Query: 150 SRLLELMIQI-----------------GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
             LL+ ++                   G   +  V++ LM+ +  +G  + A + F  + 
Sbjct: 123 QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR 182

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               +    S   L +   K      A + Y E+L  G  PDV  +N L   L + H++ 
Sbjct: 183 KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  LF E+ + G+     ++ T I+G CK+G + +   L R +   +   D+  Y+ LI
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +GLCK G+L  A +LF  +    L+ + VT+  +I+  C  G+ D   +++  M  K
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK 359



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 9/145 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     ++   G +P+  TY  +I+G C+ G       L +EM   +G       P  
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM-QCDGHV-----PGV 505

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +++GLCK+G +  A  L   M +  + P+ +TYN L+ G C   +  +   L  E
Sbjct: 506 VTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNREDFDKLQSE 565

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGK 145
              +G+  +  S+  ++ +L K  K
Sbjct: 566 ---KGLVQDYGSYTSLIGDLRKTCK 587


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 199/429 (46%), Gaps = 64/429 (14%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------F 52
            EA  L + + + G  P+V +Y+T++NG CR G       L E M     +          
Sbjct: 707  EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 766

Query: 53   GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G++C+                    P+TV YTT+IDG CK G +  A + F +M   +I 
Sbjct: 767  GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 826

Query: 93   PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            P+V+TY ++I GFC   D  EA  LF EM  +G++P+ V+F  ++N  CK G M +A R+
Sbjct: 827  PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 886

Query: 153  LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING--- 209
               MIQ G  PN   Y TL+DG C  G ++ A EL   M  +G + N+F+Y+ ++NG   
Sbjct: 887  HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 946

Query: 210  --------------------------------YCKNKEIEGALSLYSEMLSKGIKPDVVI 237
                                            YCK+ E++ A  +  EML KG++P +V 
Sbjct: 947  SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 1006

Query: 238  YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            +N L  G      +E   KL + M   G+A +   + + +   C    +  A  +++ + 
Sbjct: 1007 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 1066

Query: 298  ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  D + Y  L+ G CK+  +K AW LF+ +        V TY+++I       K  
Sbjct: 1067 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 1126

Query: 358  KARDLFLDM 366
            +AR++F  M
Sbjct: 1127 EAREVFDQM 1135



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 166/320 (51%), Gaps = 6/320 (1%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  LF ++   G EP+  T+  LING C+ GH   A  +   M          C PN 
Sbjct: 846  VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------CSPNV 899

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            VTYTT+IDGLCKEG +D A EL  +M    + PN+ TYNS+++G C + +  EA  L  E
Sbjct: 900  VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 959

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                G+  + V++  +M+  CK+G+MD+A  +L+ M+  G++P    +N LM+GFCL G 
Sbjct: 960  FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 1019

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +   E+L   M + G   N  +++ L+  YC    ++ A ++Y +M S+G+ PD   Y  
Sbjct: 1020 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 1079

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
            L  G  +   ++ A+ LF EM+  G +     Y   I G  K    +EA E+F  +R   
Sbjct: 1080 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREG 1139

Query: 301  YELDIRAYNCLIDGLCKSGR 320
               D   ++   D   K  R
Sbjct: 1140 LAADKEIFDFFSDTKYKGKR 1159



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 198/369 (53%), Gaps = 7/369 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKPNT 60
           EA  +F K+  +G   +V + N  +  L +  + T  A+ +F E      E GV    N 
Sbjct: 636 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP----EVGVCW--NV 689

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  +I  +C+ G + +A  L L M+ +   P+V++Y+++++G+C   + ++   L   
Sbjct: 690 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 749

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN   +  I+  LC+  K+ EA      MI+ G+ P+  VY TL+DGFC  G 
Sbjct: 750 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 809

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A + F  M S     +V +Y+ +I+G+C+  ++  A  L+ EM  KG++PD V +  
Sbjct: 810 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 869

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   ++ AF++ + M + G + +   Y T IDGLCK G +  A EL   +  + 
Sbjct: 870 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 929

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + +I  YN +++GLCKSG ++ A +L        L AD VTY  ++ A C  G+MDKA+
Sbjct: 930 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 989

Query: 361 DLFLDMEAK 369
           ++  +M  K
Sbjct: 990 EILKEMLGK 998



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 178/337 (52%), Gaps = 6/337 (1%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A+  F ++      P+V TY  +I+G C+ G  + A  LF EM      F    +P++VT
Sbjct: 813  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM------FCKGLEPDSVT 866

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +T +I+G CK G +  A  +   M     +PNVVTY +LI G C   D + A  L  EM 
Sbjct: 867  FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              G+QPN+ ++N I+N LCK+G ++EA +L+      G+  +   Y TLMD +C +G ++
Sbjct: 927  KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            +A+E+   M   G +  + ++++L+NG+C +  +E    L + ML+KGI P+   +N+L 
Sbjct: 987  KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 1046

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                  + ++ A  ++ +M   GV  D   Y   + G CK   + EA  LF+ ++   + 
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            + +  Y+ LI G  K  +   A E+F  + R  L AD
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  PN  T+N+L+   C   +   A  ++++M + G G       P+  TY  ++ G CK
Sbjct: 1034 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCK 1086

Query: 73   EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
               + +A  LF +MK +  + +V TY+ LI GF     + EA+ +F +M  +G+  +   
Sbjct: 1087 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 1146

Query: 133  FNVIMNELCKNGKMD 147
            F+   +   K  + D
Sbjct: 1147 FDFFSDTKYKGKRPD 1161


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/368 (33%), Positives = 195/368 (52%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K++  GC PNV TY  LI+GL R G   VA+ ++ +M       G+V  P  V
Sbjct: 325 EAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD----GLV--PTAV 378

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+ L  EG  + A  +F  M   +  PN  TYN +I GFC      +A  +F +M
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  PNV+++N+I++   K G M+ A RLLE+M   G++ + + Y  L+ GF   G++
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   NV +Y+ +INGY    +++ AL+L+ +M+  G  P    YN +
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + +++  A     +M + G+  +   Y +FIDGLCKNG    A ++F  ++   Y
Sbjct: 559 ISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y+ LIDGLC+ G+   A +  R L  G    +V TY  ++  LC  G+  +A  
Sbjct: 619 FPNLCTYSSLIDGLCQEGQ---AEDAERLLDDGCE-PNVDTYTTLVRGLCGKGRCYEADQ 674

Query: 362 LFLDMEAK 369
           L   M+ K
Sbjct: 675 LVESMKKK 682



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 189/392 (48%), Gaps = 29/392 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A  +F ++   GC+PN  TY+ LINGLC  G    A+++ EEM +   E  V        
Sbjct: 256 AFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIV 315

Query: 56  ----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                 C PN  TYT +I GL ++G  + A  ++ KM  + + P
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
             VTY++LI+       +  A  +F  M+     PN  ++NVI+   C  G + +A+ + 
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M++ G  PN   YN ++  +   G +N A  L   M+  G K + ++Y+ LI+G+ + 
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            ++E A SL++EM+  GI P+VV YN +  G   + +V+ A  LF +M   G    +  Y
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I G  K   I EA      +       ++  Y   IDGLCK+GR  +A+++F  + +
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
                ++ TY+ +I  LC +G+ + A  L  D
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD 647



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 177/353 (50%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+FT+N +I  LC  G    A     E+  G+      C P+T TYT++I G CK 
Sbjct: 197 GIRPNLFTFNAMIKILCNKGKVQEA-----ELIMGHIFHYGAC-PDTFTYTSLIIGHCKN 250

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A E+F +M  +  +PN VTY++LI+G C      EA  +  EM+D+G++P V ++
Sbjct: 251 GNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAY 310

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            + +  LC  G+  EA +LL  M + G  PN   Y  L+ G    G+   A  ++  M +
Sbjct: 311 TIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLA 370

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G      +YS LIN        E AL+++  MLS    P+   YN +  G   I  +++
Sbjct: 371 DGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQK 430

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +FD+M + G + +   Y   I    K GY+  A+ L   ++    +LD   Y  LI 
Sbjct: 431 ATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLIS 490

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G  + G+L+ A+ LF  +    +  +VVTYN +I+      K+D A  LF  M
Sbjct: 491 GFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKM 543



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 195/368 (52%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+F ++   G  PNV TYN +I+   + G+   A+ L E M  GNG      K +T 
Sbjct: 430 KATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLE-MMKGNG-----LKLDTW 483

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G  + G ++ A  LF +M +  I+PNVVTYN++I+G+      ++A  LF +M
Sbjct: 484 TYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKM 543

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P+  ++N++++   K  ++ EA      M++ G+ PN   Y + +DG C  GR 
Sbjct: 544 VESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRT 603

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  M+      N+ +YS LI+G C+  + E A      +L  G +P+V  Y TL
Sbjct: 604 SLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTL 659

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +   A +L + M++ G+      YR  + G CKN  +  A+++F ++    +
Sbjct: 660 VRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGF 719

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  Y  LI  LCK+   + A  +F+++ +    +D V + +++  L  +G+ D + +
Sbjct: 720 QPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLE 779

Query: 362 LFLDMEAK 369
           L   ME++
Sbjct: 780 LLHVMESR 787



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 10/299 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ALF K+   G  P+  TYN +I+G  +T     A N   +M       G++  PN +
Sbjct: 535 DALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQ----GLL--PNVI 588

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT+ IDGLCK G    A ++F +MK  +  PN+ TY+SLI G C      +A+     +
Sbjct: 589 TYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAE----RL 644

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G +PNV ++  ++  LC  G+  EA +L+E M + G++P+  +Y  L+ G C    V
Sbjct: 645 LDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEV 704

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F SM + G +  +  Y  LI   CK    + A  ++  ML K    D V++  L
Sbjct: 705 ESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVL 764

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
             GL +  + + + +L   M+      +          L   G  +E  ++ + L I+K
Sbjct: 765 LDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVK 823



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 123/259 (47%), Gaps = 10/259 (3%)

Query: 118 FIEMMDQGVQPNVV----SFNVIMNELCKNGKMDEASRLLELMIQIGVRPN----AFVYN 169
           F+ M+++ V+  +     +  ++M + C+N    E  R+++++ +I    +     + ++
Sbjct: 114 FVSMLNRLVRDRLFVPADNVRILMIKSCRNE--GEVKRVIQVLSEINTTYDFGYTLYSFS 171

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           TL+             ++++ M + G + N+F+++ +I   C   +++ A  +   +   
Sbjct: 172 TLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHY 231

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G  PD   Y +L IG  +   ++ AF++FD M + G   ++  Y   I+GLC  G + EA
Sbjct: 232 GACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEA 291

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           +++   +     E  + AY   I  LC +GR   A +L   + +     +V TY  +I  
Sbjct: 292 MDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISG 351

Query: 350 LCADGKMDKARDLFLDMEA 368
           L  DGK + A  ++  M A
Sbjct: 352 LSRDGKFEVAIGVYHKMLA 370


>gi|115479179|ref|NP_001063183.1| Os09g0417500 [Oryza sativa Japonica Group]
 gi|50253027|dbj|BAD29277.1| putative fertility restorer homologue A [Oryza sativa Japonica
           Group]
 gi|113631416|dbj|BAF25097.1| Os09g0417500 [Oryza sativa Japonica Group]
          Length = 618

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 204/376 (54%), Gaps = 22/376 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF++++  G  PN++TYN L++   +  +   AL  + ++     + G+V  PN V
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDV 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +TT+IDGLC+   + +AK +FL M    + P V  YNSLIHG   +    EA   F E+
Sbjct: 280 IFTTLIDGLCQANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+  + ++++  LC  G+M  A+R LE+M Q G+  NA  YN L+D +C +G +
Sbjct: 340 IRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M  +G + NV +YS LI+G+ KN E+E A+++Y+EM++KG++P+VV Y  L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ AF L  EM+  G+ ++       +DGLC+   + +AV       I++Y
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRF-----IMEY 514

Query: 302 ELDIRA-----------YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
               ++           Y  LI GL   G+   A   F  +    ++ D  TY ++I  L
Sbjct: 515 SGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574

Query: 351 CADGKMDKARDLFLDM 366
           C  G +  A  L+ DM
Sbjct: 575 CMLGYVLNAMMLYADM 590



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 195/368 (52%), Gaps = 9/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F +LR     P +   N +++GL +         LF+EM       G    P+ V
Sbjct: 124 EALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEM------LGRGMVPSVV 174

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+    +G V KA E++ +M    I+PNVVTY ++I   C  +   +A+ LF+EM
Sbjct: 175 TYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMICALCEEDCIGDAEGLFLEM 234

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PN+ ++N +M+   K   +  A      +++ G+ PN  ++ TL+DG C   R+
Sbjct: 235 KEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCQANRI 294

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ +F+ M        V  Y+ LI+G  ++   + AL+ + E++ KG++PD    + +
Sbjct: 295 TEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKGLRPDEFTCSIV 354

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  Q++ A +  + MQ+ G+A +  AY   ID  CK+G + EA+     +  +  
Sbjct: 355 VRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV 414

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E ++  Y+ LIDG  K+G ++IA  ++  +    +  +VVTY  +IH    +G MD A  
Sbjct: 415 EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 474

Query: 362 LFLDMEAK 369
           L  +ME K
Sbjct: 475 LQKEMEEK 482



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 122/273 (44%), Gaps = 47/273 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A F ++   G  P+ FT + ++ GLC  G   VA    E M       G+    N  
Sbjct: 331 EALAFFQEIIRKGLRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQS----GIAL--NAA 384

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +ID  CK G +D+A     +M +  + PNVVTY+SLI G     +   A  ++ EM
Sbjct: 385 AYNVLIDEYCKSGNLDEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEM 444

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC----- 176
           + +GV+PNVV++  +++   KNG MD A  L + M + G+  NA   + L+DG C     
Sbjct: 445 VAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRV 504

Query: 177 ------------------------------------LTGRVNRAEELFVSMESMGCKHNV 200
                                               + G+ N A   F  M   G   + 
Sbjct: 505 QDAVRFIMEYSGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDR 564

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           F+Y+++I G C    +  A+ LY++M+  G+KP
Sbjct: 565 FTYTLVIRGLCMLGYVLNAMMLYADMVKVGVKP 597


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 200/365 (54%), Gaps = 15/365 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++    C PN  T+ T I   C+ G    A+ L + M     ++G  C P+ V
Sbjct: 230 DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMP----QYG--CTPDVV 283

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+T+++G  ++G VD A EL   M      PN + YN+ + G C A  W +   L +EM
Sbjct: 284 IYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEM 340

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN  +F+++ + LC+NG +D A  +LE M + G RP+A +YNTL+  F   GRV
Sbjct: 341 VRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRV 400

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   + SM C  +V S++  + G C+ +  + A  L  +ML +      + +N L
Sbjct: 401 DDALKL---LNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNIL 457

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A ++F++M ++G   D   Y + I+GL + G +  A+ELF+++     
Sbjct: 458 IDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PC 514

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  YN ++ GLC++ R + A EL  ++ R     + +T+NI+I++LC  G +D+A +
Sbjct: 515 KPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIE 574

Query: 362 LFLDM 366
           +F  M
Sbjct: 575 VFEQM 579



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 173/352 (49%), Gaps = 15/352 (4%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV TY TLING CR+G    AL L   M            P+T TY T++ GLC     +
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---------VAPDTYTYNTVLMGLCGARQWE 229

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A+ L  +M   +  PN VT+ + I  FC     + A  L   M   G  P+VV ++ ++
Sbjct: 230 DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLV 289

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N   + G++D+A  LL  M+    +PN   YN  + G C+  R     +L V M    C 
Sbjct: 290 NGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  ++S+L +  C+N  ++ A+ +  +M   G +PD VIYNTL     E  +V+ A KL
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            + M     + D  ++   + GLC+     +A EL   +      L    +N LID LC+
Sbjct: 407 LNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +GR+  A E+F  +P+     D+VTY+ +I+ L   G ++ A +LF  M  K
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCK 515



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 178/329 (54%), Gaps = 15/329 (4%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PN  T++ L + LC+ G    A+ + E+M     ++G  C+P+ V Y T+I    ++G
Sbjct: 345 CLPNEATFSMLTSCLCQNGLVDCAMEVLEQMH----KYG--CRPDAVIYNTLIYSFSEQG 398

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD A +L   M     +P+V+++N+ + G C A  W++A+ L ++M+ +      ++FN
Sbjct: 399 RVDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFN 455

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++++ LC+NG+++ A  + E M + G  P+   Y++L++G    G V  A ELF   +SM
Sbjct: 456 ILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELF---QSM 512

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
            CK ++F Y+ ++ G C+    E A  L S M  K   P+ + +N L   L +   V+RA
Sbjct: 513 PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRA 572

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            ++F++M ++G   D + Y   I+G  + G + +A  L  T   +  + D  +YN  + G
Sbjct: 573 IEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLST---MSCKPDAVSYNSALKG 629

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           LC++ R K A E+   + R     + VT+
Sbjct: 630 LCRAERWKEAEEVVAEMLRMKCPPNEVTF 658



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 175/400 (43%), Gaps = 53/400 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  ++  +GC P+V  Y+TL+NG    G    A+ L           G++CKPNT+
Sbjct: 265 RAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLN---------GMLCKPNTI 315

Query: 62  TYTTIIDGLC-----------------------------------KEGFVDKAKELFLKM 86
            Y   + GLC                                   + G VD A E+  +M
Sbjct: 316 CYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQM 375

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                 P+ V YN+LI+ F      ++A  L   M      P+V+SFN  +  LC+  + 
Sbjct: 376 HKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERW 432

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A  L+  M++         +N L+D  C  GRVN A E+F  M   GC  ++ +YS L
Sbjct: 433 DDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSL 492

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING  +   +E A+ L+  M     KPD+  YN +  GL    + E A +L   M R   
Sbjct: 493 INGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDC 549

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +   +   I+ LC+ G +  A+E+F  +       DI  YN LI+G  + GRL  A  
Sbjct: 550 PPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARR 609

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L  ++       D V+YN  +  LC   +  +A ++  +M
Sbjct: 610 LLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEM 646



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 134/245 (54%), Gaps = 15/245 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L +++    C     T+N LI+ LC+ G    A+ +FE+M     ++G  C P+ V
Sbjct: 434 DAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMP----KYG--CTPDIV 487

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I+GL ++G V+ A ELF  M      P++  YN+++ G C A  W +A  L   M
Sbjct: 488 TYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRAARWEDAGELISNM 544

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   PN ++FN+++N LC+ G +D A  + E M + G  P+ F YN L++GF   GR+
Sbjct: 545 ARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRL 604

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY--- 238
           + A  L   + +M CK +  SY+  + G C+ +  + A  + +EML     P+ V +   
Sbjct: 605 DDARRL---LSTMSCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYA 661

Query: 239 NTLFI 243
           N LF+
Sbjct: 662 NRLFV 666



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 120/240 (50%), Gaps = 8/240 (3%)

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+ N+++ +LC   ++ +A R+L+ +   G   +   +NTL+ G+C  GR+  AE L  
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGA-ADPVSHNTLVAGYCRDGRLADAERLLA 170

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           +    G   NV +Y+ LINGYC++  +  AL+L + M    + PD   YNT+ +GL    
Sbjct: 171 AAGLSG-AANVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGAR 226

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           Q E A  L  EM R+    +   + T I   C+NG +  AV+L   +       D+  Y+
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYS 286

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L++G  + GR+  A EL   +   +   + + YN  +  LC   + +    L ++M  K
Sbjct: 287 TLVNGFSEQGRVDDAIELLNGM---LCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRK 343



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 9/143 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +    C PN  T+N LIN LC+ G    A+ +FE+M     ++G    P+  
Sbjct: 536 DAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMP----KYGST--PDIF 589

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+G  ++G +D A+ L   M   +  P+ V+YNS + G C A  W EA+ +  EM
Sbjct: 590 TYNALINGFSEQGRLDDARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEM 646

Query: 122 MDQGVQPNVVSFNVIMNELCKNG 144
           +     PN V+F         NG
Sbjct: 647 LRMKCPPNEVTFKYANRLFVPNG 669


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/363 (31%), Positives = 193/363 (53%), Gaps = 7/363 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  + +++   GC+ N+  YN LI+GLC+      A+ + +++A      G   KP+ VT
Sbjct: 246 AKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLA------GKELKPDVVT 299

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++ GLCK    +   E+  +M     +P+    +SL+ G        EA  L   + 
Sbjct: 300 YCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVA 359

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + GV PN+  +N +++ LCK    DEA  L + M +IG+ PN   Y+ L+D FC  G+++
Sbjct: 360 EFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLD 419

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A      M  MG K +V+ Y+ LING+CK  +I  A SL +EM++K ++P VV Y +L 
Sbjct: 420 TALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLM 479

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     ++ +A +L+ EM   G+    + + T + GL + G I +AV+LF  +     +
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVK 539

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN +I+G C+ G +  A+E    +    ++ D  +Y  +IH LC  G+  +A+ +
Sbjct: 540 PNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK-V 598

Query: 363 FLD 365
           F+D
Sbjct: 599 FVD 601



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/358 (32%), Positives = 177/358 (49%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++  FG  PN+F YN LI+ LC+  +   A  LF+ M    G+ G+   PN V
Sbjct: 350 EALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRM----GKIGLC--PNDV 403

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +ID  C+ G +D A     +M D  + P+V  YNSLI+G C   D + A+ L  EM
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEM 463

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ ++P VV++  +M   C  GK+++A RL   M   G+ P+ + + TL+ G    G +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLI 523

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M     K N  +Y+++I GYC+   +  A    +EM+ KGI PD   Y  L
Sbjct: 524 RDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    Q   A    D + +     +   Y   + G C+ G + EA+ + + + +   
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +LD+  Y  LIDG  K    K+   L + +    L  D V Y  MI A    G   +A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 185/352 (52%), Gaps = 8/352 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP V TY +L+ G C  G    AL L+ EM       G+V  P+  T+TT++ GL + G 
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK----GIV--PSIYTFTTLLSGLFRAGL 522

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A +LF +M + N+ PN VTYN +I G+C   + ++A     EM+++G+ P+  S+  
Sbjct: 523 IRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRP 582

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC  G+  EA   ++ + +     N   Y  L+ GFC  G++  A  +   M   G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRG 642

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              ++  Y +LI+G  K+K+ +  L L  EM  +G+KPD VIY ++     +    + AF
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            ++D M   G   +   Y   I+GLCK G++ EA  L   +R      +   Y C +D L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDIL 762

Query: 316 CKS-GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            K  G +K A EL  ++ +G L+A+  TYN++I   C  G+M++A +L   M
Sbjct: 763 TKGVGDMKKAVELHNAILKG-LLANTATYNMLIRGFCRQGRMEEASELITRM 813



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 195/427 (45%), Gaps = 76/427 (17%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G +P+V+ YN+LING C+ G    A +L  EM N   E      P  VTYT+++ G C 
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLE------PTVVTYTSLMGGYCS 484

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +G ++KA  L+ +M  + I P++ T+ +L+ G   A    +A  LF EM +  V+PN V+
Sbjct: 485 KGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVT 544

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +NV++   C+ G M +A   L  MI+ G+ P+ + Y  L+ G CLTG+ + A+     + 
Sbjct: 545 YNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALS------------------------------- 221
              C+ N   Y+ L++G+C+  ++E ALS                               
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRK 664

Query: 222 ----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
               L  EM  +G+KPD VIY ++     +    + AF ++D M   G   +   Y   I
Sbjct: 665 VFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724

Query: 278 DGLCKNGYIVEAVELFRTLR----------------------------------ILKYEL 303
           +GLCK G++ EA  L   +R                                  ILK  L
Sbjct: 725 NGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLL 784

Query: 304 -DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN LI G C+ GR++ A EL   +    +  D +TY  MI  LC    + KA +L
Sbjct: 785 ANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIEL 844

Query: 363 FLDMEAK 369
           +  M  K
Sbjct: 845 WNSMTEK 851



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 184/352 (52%), Gaps = 14/352 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+    ++L+ GL + G    ALNL + +A    EFGV   PN   Y  +ID LCK    
Sbjct: 330 PSEAAVSSLVEGLRKRGKVEEALNLVKRVA----EFGV--SPNIFVYNALIDSLCKGRNF 383

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A+ LF +M    + PN VTY+ LI  FC     + A     EM+D G++P+V  +N +
Sbjct: 384 DEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSL 443

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  CK G +  A  L+  MI   + P    Y +LM G+C  G++N+A  L+  M   G 
Sbjct: 444 INGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++++++ L++G  +   I  A+ L++EM    +KP+ V YN +  G  E   + +AF+
Sbjct: 504 VPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFE 563

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             +EM   G+  DT++YR  I GLC  G   EA      L     EL+   Y  L+ G C
Sbjct: 564 FLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623

Query: 317 KSGRLKIAWELFRSLP-RGVLIADVVTYNIMIHALCADGKMD-KARDLFLDM 366
           + G+L+ A  + + +  RGV + D+V Y ++I     DG +  K R +FL +
Sbjct: 624 REGKLEEALSVCQDMGLRGVDL-DLVCYGVLI-----DGSLKHKDRKVFLGL 669



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 193/402 (48%), Gaps = 45/402 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++   G  P+++T+ TL++GL R G    A+ LF EMA  N       KPN V
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWN------VKPNRV 543

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+G C+EG + KA E   +M ++ I P+  +Y  LIHG C     +EAK +F++ 
Sbjct: 544 TYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDG 602

Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASR----------------------------- 151
           + +G  + N + +  +++  C+ GK++EA                               
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKD 662

Query: 152 ------LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                 LL+ M   G++P+  +Y +++D    TG    A  ++  M + GC  N  +Y+ 
Sbjct: 663 RKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE-IHQVERAFKLFDEMQRH 264
           +ING CK   +  A  L S+M      P+ V Y      L + +  +++A +L + + + 
Sbjct: 723 VINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK- 781

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+ A+T  Y   I G C+ G + EA EL   +       D   Y  +I  LC+   +K A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            EL+ S+    +  D V YN +IH  C  G+M KA +L  +M
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 141/270 (52%), Gaps = 1/270 (0%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           ++ LI  +  +    +   +F  MM +  + P V + + +++ L K      A  L + M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM 218

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           I +G+RP+ ++Y  ++   C    ++RA+E+ V ME+ GC  N+  Y++LI+G CK +++
Sbjct: 219 INVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             A+ +  ++  K +KPDVV Y TL  GL ++ + E   ++ DEM R   +    A  + 
Sbjct: 279 WEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSL 338

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           ++GL K G + EA+ L + +       +I  YN LID LCK      A  LF  + +  L
Sbjct: 339 VEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGL 398

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
             + VTY+I+I   C  GK+D A     +M
Sbjct: 399 CPNDVTYSILIDMFCRRGKLDTALSFLGEM 428



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 158/335 (47%), Gaps = 8/335 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ ++Y  LI+GLC TG    A    + +  GN      C+ N + YT ++ G C+E
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN------CELNEICYTGLLHGFCRE 625

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A  +   M    ++ ++V Y  LI G     D      L  EM D+G++P+ V +
Sbjct: 626 GKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIY 685

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++   K G   EA  + +LMI  G  PN   Y  +++G C  G VN AE L   M  
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRP 745

Query: 194 MGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                N  +Y   ++   K   +++ A+ L++ +L KG+  +   YN L  G     ++E
Sbjct: 746 GNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRME 804

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L   M   GV+ D   Y T I  LC+   + +A+EL+ ++       D  AYN LI
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            G C +G +  A EL   + R  L  +  T    I
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLKPNTETSETTI 899



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/312 (28%), Positives = 146/312 (46%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P   T + ++ GL K      A ELF  M +  I P+V  Y  +I   C   D + AK +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            ++M   G   N+V +NV+++ LCK  K+ EA  + + +    ++P+   Y TL+ G C 
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
                   E+   M  +    +  + S L+ G  K  ++E AL+L   +   G+ P++ +
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L   L +    + A  LFD M + G+  +   Y   ID  C+ G +  A+     + 
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +  +  +  YN LI+G CK G +  A  L   +    L   VVTY  ++   C+ GK++
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 358 KARDLFLDMEAK 369
           KA  L+ +M  K
Sbjct: 490 KALRLYHEMTGK 501



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 144/306 (47%), Gaps = 31/306 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA      L    CE N   Y  L++G CR G    AL++ ++M     +  +VC     
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLI 654

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                   KP+ V YT++ID   K G   +A  ++  M +E   
Sbjct: 655 DGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN-GKMDEASR 151
           PN VTY ++I+G C A   NEA+ L  +M      PN V++   ++ L K  G M +A  
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVE 774

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L   +++ G+  N   YN L+ GFC  GR+  A EL   M   G   +  +Y+ +I+  C
Sbjct: 775 LHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELC 833

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +  +++ A+ L++ M  KGI+PD V YNTL  G     ++ +A +L +EM R G+  +T 
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTE 893

Query: 272 AYRTFI 277
              T I
Sbjct: 894 TSETTI 899



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 111/245 (45%), Gaps = 41/245 (16%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  ++   G +P+   Y ++I+   +TG    A  +++ M N        C PN VTYT
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG------CVPNEVTYT 721

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY-------------------------- 98
            +I+GLCK GFV++A+ L  KM+  N  PN VTY                          
Sbjct: 722 AVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK 781

Query: 99  ---------NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
                    N LI GFC      EA  L   M+  GV P+ +++  +++ELC+   + +A
Sbjct: 782 GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKA 841

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             L   M + G+RP+   YNTL+ G C+ G + +A EL   M   G K N  +    I+ 
Sbjct: 842 IELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISN 901

Query: 210 YCKNK 214
              +K
Sbjct: 902 DSSSK 906


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 191/351 (54%), Gaps = 7/351 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FT+N L+  LC+   T  A+   ++M+         C P   TYT+++DG  K G +D+A
Sbjct: 255 FTFNPLVAALCKAERTEEAIAFVKKMSERR------CFPTLFTYTSLVDGFLKLGRLDEA 308

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
                +  +    P+ VTY S+I G C      E    F EM ++G +P+ V++  +++ 
Sbjct: 309 LLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDG 368

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
             K   + +A R+   M+Q G   +   YN ++DG C  GRV  A   F++ME  GC   
Sbjct: 369 FMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVAT 428

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V +YS L++G+C    +  A+ L+  ML +G +P++V YN +  GL    ++ +A+  F+
Sbjct: 429 VVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFE 488

Query: 260 EMQRHGVAADTWAYRTFIDGLCKN-GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           ++ +  +  D + + +F+ GLC+    + + VELF ++       ++ +Y+ L+DG+C++
Sbjct: 489 KLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRA 548

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G L++  E+F  +    +  DVV +N +I  LC  G++D+A ++F ++E +
Sbjct: 549 GGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 599



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/373 (30%), Positives = 188/373 (50%), Gaps = 13/373 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++  +    GCEP+  TYN  I+GLC+      A  L ++M          C P TV
Sbjct: 59  EAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKK------CLPTTV 112

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGL K G +D+A  +  +M ++  +P + TY  +I G   A    EA+ +F++M
Sbjct: 113 TYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 172

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ----IGVRPNAFVYNTLMDGFCL 177
           +  G +P+   +  +++ L K GK+DEA   L  M++     GV P+  ++N ++   C 
Sbjct: 173 LGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCA 232

Query: 178 TGRVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           +G +  A   F  + +S+   H  F+++ L+   CK +  E A++   +M  +   P + 
Sbjct: 233 SGNLEDALAYFDELDDSLDLTH--FTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLF 290

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y +L  G  ++ +++ A     E    G   D   Y + IDGLCK G + E  E F  +
Sbjct: 291 TYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEM 350

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R   YE D   Y  LIDG  K+  +  A  ++R + +   +   VTYNI++  LC  G++
Sbjct: 351 RNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRV 410

Query: 357 DKARDLFLDMEAK 369
            +A   FL ME +
Sbjct: 411 AEAYATFLAMEER 423



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 177/350 (50%), Gaps = 3/350 (0%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F+ +   GC P+ F Y  LI+GL + G    AL    +M       GV  +P+ V
Sbjct: 164 EARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGV--EPDVV 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I  LC  G ++ A   F ++ D++++    T+N L+   C A    EA     +M
Sbjct: 222 IHNLVIRQLCASGNLEDALAYFDEL-DDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKM 280

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++   P + ++  +++   K G++DEA   L+  ++ G  P+A  Y +++DG C  GRV
Sbjct: 281 SERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRV 340

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               E F  M + G + +  +Y+ LI+G+ K K I  A  +Y +ML  G     V YN +
Sbjct: 341 EEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNII 400

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V  A+  F  M+  G  A    Y   +DG C  G +  AVELFR +     
Sbjct: 401 LDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGC 460

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           E ++ +YN +I GLC++G+L  A+  F  L +  L  DV T+N  +H LC
Sbjct: 461 EPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLC 510



 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 181/370 (48%), Gaps = 13/370 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           +A  L  K+    C P   TY  L++GL + G    A+ + E+M   GN        P  
Sbjct: 94  DAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGN-------SPTL 146

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TYT +IDGL K G V++A+ +F+ M      P+   Y +LI G       +EA     +
Sbjct: 147 KTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQ 206

Query: 121 MMD----QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           M++    +GV+P+VV  N+++ +LC +G +++A    +  +   +    F +N L+   C
Sbjct: 207 MVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD-ELDDSLDLTHFTFNPLVAALC 265

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R   A      M    C   +F+Y+ L++G+ K   ++ AL    E + +G  PD V
Sbjct: 266 KAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAV 325

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y ++  GL ++ +VE   + F EM+  G   D   Y   IDG  K   I +A  ++R +
Sbjct: 326 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 385

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                 +    YN ++DGLCK+GR+  A+  F ++     +A VVTY+ ++   C++G +
Sbjct: 386 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 445

Query: 357 DKARDLFLDM 366
             A +LF  M
Sbjct: 446 SAAVELFRRM 455



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 180/352 (51%), Gaps = 16/352 (4%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
             L+NGLC+TG    A+ L +EM          C P+ V +T +I+GLC+E  +D+A  +
Sbjct: 13  TALLNGLCKTGQLDRAMLLLDEMP---------CSPDMVAFTVVINGLCREKRLDEAFSV 63

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
             +       P+ VTYN  I G C A   ++A  L  +M ++   P  V++  +++ L K
Sbjct: 64  LERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 123

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
            G++DEA  +LE M++ G  P    Y  ++DG    GRV  A  +FV M   GC+ + F 
Sbjct: 124 AGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 183

Query: 203 YSILINGYCKNKEIEGALSLYSEML----SKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           Y+ LI+G  K  +++ AL   ++M+    ++G++PDVVI+N +   L     +E A   F
Sbjct: 184 YTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYF 243

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DE+    +    + +   +  LCK     EA+   + +   +    +  Y  L+DG  K 
Sbjct: 244 DELD-DSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL 302

Query: 319 GRLKIA-WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GRL  A  +L  ++ RG  I D VTY  +I  LC  G++++  + F +M  +
Sbjct: 303 GRLDEALLQLKEAVERG-FIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNR 353



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 106/206 (51%), Gaps = 12/206 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   GCEPN+ +YN +I GLCR G    A   FE++         +C P+  T
Sbjct: 448 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRR-----LC-PDVYT 501

Query: 63  YTTIIDGLCKE-GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           + + + GLC+    V    ELF  M  +  +PN+ +Y+ L+ G C A        +F EM
Sbjct: 502 FNSFLHGLCQRLDTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEM 561

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR--PNAFVYNTLMDGFCLTG 179
           + +GV P+VV FN ++  LC  G++DEA   LE+  ++  R  P+A+ Y +L+D      
Sbjct: 562 VSRGVAPDVVVFNTLIRWLCIAGRVDEA---LEVFRELERRSAPDAWSYWSLLDALSRCE 618

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSI 205
           R+  A  L   M+  GC    +  ++
Sbjct: 619 RMEEARLLSFHMKLQGCAPRHYDLTV 644



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 7/134 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +   LF  +   G  PN+ +Y+ L++G+CR G   V L +F EM +     GV   P+ V
Sbjct: 518 DGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSR----GVA--PDVV 571

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T+I  LC  G VD+A E+F +++  +  P+  +Y SL+          EA+ L   M
Sbjct: 572 VFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDALSRCERMEEARLLSFHM 630

Query: 122 MDQGVQPNVVSFNV 135
             QG  P      V
Sbjct: 631 KLQGCAPRHYDLTV 644



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 3/136 (2%)

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           D  +   L  GL +  Q++RA  L DEM     + D  A+   I+GLC+   + EA  + 
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
                   E D   YN  IDGLCK+ R+  A++L + +     +   VTY  ++  L   
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 354 GKMDKARDLFLDMEAK 369
           G++D+A  +   M  K
Sbjct: 125 GRLDEAMAILEQMVEK 140



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +D R    L++GLCK+G+L  A  L   +P      D+V + ++I+ LC + ++D+A
Sbjct: 7   VDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEA 60


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 192/388 (49%), Gaps = 41/388 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V T+N LI+   R G    A+ L + MAN         KP  VT+ +++ GLCK    
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANKG------LKPGIVTFNSVLKGLCKHRRF 243

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKAKE+F  M   ++ P+V ++N LI GFC   +  EA   + EM  +GV P+VVSF+ +
Sbjct: 244 DKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL 303

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +      GKMD A+  L  M  +G+ P+  +Y  ++ GFC  G ++ A  +   M  +GC
Sbjct: 304 IGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGC 363

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+NG CK   +  A  L +EM  +G+ PD+  + TL  G       E+A +
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQ 423

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-------LKYEL------ 303
           LFD +    +  D  AY + IDG+C+ G + +A EL+  +         + Y +      
Sbjct: 424 LFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHC 483

Query: 304 ----------------------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
                                 +I  YN +I G C+SG +K   +  + + +  ++ D++
Sbjct: 484 EKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLI 543

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
           T+N +IH    +  M  A ++F  ME +
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIMEKE 571



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/354 (31%), Positives = 191/354 (53%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E N +T N +++  C++     A  +  EM            P+ VT+  +ID   + G 
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEK------RCVFPDVVTHNVLIDARFRAGD 207

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A  L   M ++ + P +VT+NS++ G C    +++AK +F  M    V P+V SFN+
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++   C+ G+++EA +  + M Q GV P+   ++ L+  F   G+++ A      M+ +G
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +   Y+++I G+C+   +  AL +  EM+  G  PDVV YNTL  GL + H++  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L +EM+  GV  D   + T I G C++G   +A++LF TL   +   D+ AYN LIDG+
Sbjct: 388 ELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGM 447

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C+ G L  A EL+  +    +  + VTY+I+I + C  G++++A     +M +K
Sbjct: 448 CRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSK 501



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 175/326 (53%), Gaps = 6/326 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AAA   +++  G  P+   Y  +I G CR G    AL + +EM       G+ C P+ V
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMV------GLGCLPDVV 368

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++GLCK+  +  A+EL  +MK+  + P++ T+ +LIHG+C   ++ +A  LF  +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q ++P+VV++N +++ +C+ G + +A+ L + M    + PN   Y+ L+D  C  G+V
Sbjct: 429 LHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQV 488

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A      M S G   N+ +Y+ +I GYC++  ++       +M+   I PD++ +NTL
Sbjct: 489 EEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTL 548

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +  AF +F+ M++  V  D   Y   I+G  + G + EA  +F+ +     
Sbjct: 549 IHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGI 608

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWEL 327
           E D   Y  LI+G   +G  K A++L
Sbjct: 609 EPDRYTYMSLINGHVTAGNSKEAFQL 634



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/398 (26%), Positives = 191/398 (47%), Gaps = 37/398 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           +A  +F  +      P+V ++N LI G CR G    A+  ++EM                
Sbjct: 245 KAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLI 304

Query: 50  GEFGVVCK-----------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           G F    K                 P+ V YT +I G C+ G + +A    L+++DE + 
Sbjct: 305 GLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA----LRVRDEMVG 360

Query: 93  ----PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
               P+VVTYN+L++G C  +   +A+ L  EM ++GV P++ +F  +++  C++G  ++
Sbjct: 361 LGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEK 420

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A +L + ++   +RP+   YN+L+DG C  G + +A EL+  M +     N  +YSILI+
Sbjct: 421 ALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILID 480

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            +C+  ++E A     EM+SKG  P+++ YN++  G      V++  +   +M +  +  
Sbjct: 481 SHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILP 540

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           D   + T I G  K   +  A  +F  +     + D   YN +I+G  + G ++ A  +F
Sbjct: 541 DLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVF 600

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + +    +  D  TY  +I+     G   +A  L  +M
Sbjct: 601 KKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEM 638



 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 92/293 (31%), Positives = 159/293 (54%), Gaps = 2/293 (0%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           + G+   A+E +  +   +   N  T N ++H +C + ++++A  +  EM  + V P+VV
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + NV+++   + G +D A  L++ M   G++P    +N+++ G C   R ++A+E+F +M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH-Q 250
           +      +V S++ILI G+C+  E+E A+  Y EM  +G+ PDVV ++ L IGLF    +
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCL-IGLFSTRGK 312

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ A     EM+  G+  D   Y   I G C+ G + EA+ +   +  L    D+  YN 
Sbjct: 313 MDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNT 372

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L++GLCK  RL  A EL   +    +  D+ T+  +IH  C DG  +KA  LF
Sbjct: 373 LLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 146/269 (54%), Gaps = 6/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  +++  G  P++ T+ TLI+G CR G+   AL LF+ + +         +P+ 
Sbjct: 384 LDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQR------LRPDV 437

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y ++IDG+C++G + KA EL+  M    I PN VTY+ LI   C      EA     E
Sbjct: 438 VAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDE 497

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PN++++N I+   C++G + +  + L+ M+Q  + P+   +NTL+ G+     
Sbjct: 498 MVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEEN 557

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +F  ME    + +  +Y+++ING+ +   +E A  ++ +M + GI+PD   Y +
Sbjct: 558 MHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMS 617

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L  G       + AF+L DEM   G A D
Sbjct: 618 LINGHVTAGNSKEAFQLHDEMMHRGFAPD 646



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 120/242 (49%), Gaps = 2/242 (0%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           QP V  F++++    ++ K  EA     L++   V   A   N L+      G  + AEE
Sbjct: 86  QPQV--FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEE 143

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
            +  + S   + N ++ +I+++ YCK+ E + A ++ SEM  + + PDVV +N L    F
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARF 203

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
               V+ A  L D M   G+      + + + GLCK+    +A E+FR +       D+R
Sbjct: 204 RAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVR 263

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ++N LI G C+ G ++ A + ++ + +  +  DVV+++ +I      GKMD A     +M
Sbjct: 264 SFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREM 323

Query: 367 EA 368
           + 
Sbjct: 324 KG 325



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/280 (22%), Positives = 134/280 (47%)

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
           +E+   +   +  P    ++ LI  +  +    EA   F  ++D  V     + N ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAA 131

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L + G    A     L++      NA+  N ++  +C +   ++A+ +   ME      +
Sbjct: 132 LSRAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPD 191

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V ++++LI+   +  +++ A++L   M +KG+KP +V +N++  GL +  + ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFR 251

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M +  VA D  ++   I G C+ G + EA++ ++ ++      D+ +++CLI      G
Sbjct: 252 AMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRG 311

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++  A    R +    L+ D V Y ++I   C  G M +A
Sbjct: 312 KMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351



 Score = 41.2 bits (95), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 61/148 (41%)

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           + S +L+    P   +++ L     +  +   AF+ F  +  H V     A    +  L 
Sbjct: 74  IVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALS 133

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           + G+   A E +R +     E++    N ++   CKS     A  +   + +  +  DVV
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
           T+N++I A    G +D A  L   M  K
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANK 221


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/391 (30%), Positives = 187/391 (47%), Gaps = 23/391 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  LF  L  +GC+PN  TY T+I GL        A   F+E  +      V+      
Sbjct: 317 DALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVISYTTVIKGLADS 376

Query: 56  -----------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY 98
                            C PN V YT +IDGL K G ++   + F  M   +  P   TY
Sbjct: 377 KRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTY 436

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
             +I G C A    +A  +F +M+ +G  P+ +++  +++   K  KMDEA +LL++M+ 
Sbjct: 437 TVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 496

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  P A  Y +++ GFC    +N A+E+   M   GC+  +F ++ L++ Y      E 
Sbjct: 497 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 556

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  + +EM ++G  PDV++Y +L   LF   +V  A  +FD M   G A D   Y T I 
Sbjct: 557 AYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQ 616

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
              K G +  A E+   +       D  AYN L+DG  K  R+  A+ ++  +    +  
Sbjct: 617 NFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKP 676

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + VT+N+++H L  DGK D+A  LF +M  K
Sbjct: 677 NAVTFNVLMHGLFKDGKTDRAFSLFKEMLEK 707



 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 181/353 (51%), Gaps = 12/353 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VF Y ++I+G C+ G       + EEM          C P+   Y  +ID LCK G V
Sbjct: 122 PDVFLYTSVIHGYCKAGDLDTGFKILEEM------LAAGCIPDAAAYFVLIDPLCKLGRV 175

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A ELF +M+      + VT+ +LI         +EA  L+ EM+++G +P +   + +
Sbjct: 176 DEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSL 235

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LCK GK+DEA+ + + ++   V  +   YN+LMDG+C  GRV+   +L + M     
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDN 295

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +Y+IL+ G+ +   ++ AL L+  + S G KP+   Y T+  GL++  ++E A  
Sbjct: 296 FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKA 355

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
            FDE      A D  +Y T I GL  +  I EA ELF  L+      ++ AY  +IDGL 
Sbjct: 356 FFDE------ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLL 409

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K+GR++   + F  +     +    TY ++I  LC    +  A  +F  M  K
Sbjct: 410 KAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK 462



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 191/403 (47%), Gaps = 49/403 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   GC P+  TY TLI+G  +      A  L + M     E      P  V
Sbjct: 451 DACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPE------PTAV 504

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINP---------------------------- 93
           TY +I+ G CK   +++AKE+  +M++    P                            
Sbjct: 505 TYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEM 564

Query: 94  -------NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                  +V+ Y SLI          EA+ +F  M+++G  P+ +++  I+    K G +
Sbjct: 565 TARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNV 624

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           + A  +LELM + GV P+ F YN+LMDG+    RV++A  ++  M + G K N  ++++L
Sbjct: 625 EAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVL 684

Query: 207 INGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++G  K+ + + A SL+ EML K  + P +V Y  L  GL +  +V  AF  F EM   G
Sbjct: 685 MHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRG 744

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +   Y + I  L K G I EA +L   +  L    D++AY+ LI GL  S  +  AW
Sbjct: 745 IIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAW 804

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           ++F+ + +     + VTY ++     A G+        LD+EA
Sbjct: 805 DVFQEMMKRGCAPNEVTYKVLRRGFRAAGRA-------LDLEA 840



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 181/362 (50%), Gaps = 7/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     ++   G  P+V   N ++NGLC+      A+ LF EM +      + C+P  V
Sbjct: 3   EALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPS------MGCEPTIV 56

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I GL     +D+A + F  M D    P+V+ + +LIHGFC A        L  + 
Sbjct: 57  SYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQA 116

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  +P+V  +  +++  CK G +D   ++LE M+  G  P+A  Y  L+D  C  GRV
Sbjct: 117 LKR-FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRV 175

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF  M   GC  +  ++  LI     + +++ A  LY EM+ +G +P + + ++L
Sbjct: 176 DEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSL 235

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V+ A +++  +    VA    AY + +DG CK G + + ++L   +     
Sbjct: 236 IFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDN 295

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI+ YN L+ G  ++ RL  A ELF+ L       +  TY  +I  L    +M++A+ 
Sbjct: 296 FPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKA 355

Query: 362 LF 363
            F
Sbjct: 356 FF 357



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 155/291 (53%), Gaps = 1/291 (0%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +++A +   +M    + P+VV  N +++G C A   ++A  LF+EM   G +P +VS+N 
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L    KMDEA +    MI  G  P+   + TL+ GFC  G+  +   + ++     
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKR 119

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +VF Y+ +I+GYCK  +++    +  EML+ G  PD   Y  L   L ++ +V+ A+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +LF+ M++ G   D   + T I+ L  +G + EA EL+R +    YE  +   + LI  L
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           CK+G++  A E+++++    +    V YN ++   C  G++D    L L M
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQM 290



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 174/400 (43%), Gaps = 47/400 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G EP +   ++LI  LC+ G    A  +++ +             + V
Sbjct: 212 EACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKK------VATSRV 265

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y +++DG CK G VD   +L L+M + +  P++ TYN L+ GF  AN  ++A  LF  +
Sbjct: 266 AYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLL 325

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +PN  ++  I+  L    +M+EA    +  + +        Y T++ G   + R+
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDV------ISYTTVIKGLADSKRI 379

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF  +++ GC  NV +Y+ +I+G  K   IE  L  + +M      P    Y  +
Sbjct: 380 DEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVV 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +  A K+F++M + G   DT  Y T IDG  K   + EA +L   +     
Sbjct: 440 IDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGP 499

Query: 302 ELDIRAYNCLIDGLCK-----------------------------------SGRLKIAWE 326
           E     Y  ++ G CK                                    GR + A++
Sbjct: 500 EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQ 559

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +   +       DV+ Y  +I  L + G++ +AR +F  M
Sbjct: 560 VLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSM 599


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 184/351 (52%), Gaps = 6/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TYNT+I G C  G    AL++  EM    G       PN  TY T+I G CK G V
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRV 566

Query: 77  DKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           D+A ++F +M  +  + P  V YN+LI G+C     + A      M+++GV   V ++N+
Sbjct: 567 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 626

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L  +G+  EA  L+E M   G+ P+ F YN L++G C  G V +A E+F +M   G
Sbjct: 627 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 686

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            +  V +Y+ LI    K  +++    L+ E + +GI+PD+V+YN L         ++RAF
Sbjct: 687 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 746

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+  YN LI G 
Sbjct: 747 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 806

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              G +K A  +   +        ++TYN +I  LC +G+ D A ++  +M
Sbjct: 807 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 857



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 176/362 (48%), Gaps = 18/362 (4%)

Query: 3   AAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           A ALF    +LR+  C     T+N ++  LC  G    AL L  +M           +PN
Sbjct: 467 AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 513

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            VTY T+I G C  G V  A ++  +M++   I PN  TY ++I G+C     +EA  +F
Sbjct: 514 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 573

Query: 119 IEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            EM+ +G V+P  V +N ++   C  GK+D A    + M++ GV      YN L+    +
Sbjct: 574 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 633

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR   A EL   M   G   +VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 634 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 693

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D   YN L+ GLC  GR+  A +L   +    +  D+VTYN +I      G + 
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813

Query: 358 KA 359
            A
Sbjct: 814 DA 815



 Score =  148 bits (373), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 148/284 (52%), Gaps = 10/284 (3%)

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           L+ +MK  ++  +  + + L+     A     A  LF +M    +     +FN+++  LC
Sbjct: 439 LYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLC 494

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNV 200
             GK    +R LEL+ Q+  RPNA  YNT++ GFC  GRV  A ++   M E  G   N 
Sbjct: 495 SAGK---PARALELLRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 550

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           ++Y  +I+G+CK   ++ A+ ++ EML+KG +KP+ V+YN L  G  +  +++ A    D
Sbjct: 551 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 610

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M   GVA     Y   +  L  +G   EA EL   +       D+  YN LI+G CK G
Sbjct: 611 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 670

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +K A E+F ++ R  + A VVTY  +I+AL   G++ +   LF
Sbjct: 671 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 714



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 140/254 (55%), Gaps = 8/254 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+VFTYN LING C+ G+   AL +FE M+      GV  +   V
Sbjct: 639 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS----RRGV--RATVV 692

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I  L K+G V +  +LF +     I P++V YN+LI+    + + + A  +  EM
Sbjct: 693 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 752

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ V++N +M  LC  G++DEA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 753 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 812

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI PD   Y +L
Sbjct: 813 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 872

Query: 242 FIGLFEIHQVERAF 255
             GL    + ERA 
Sbjct: 873 IEGL--TTEDERAI 884



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 6/277 (2%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL- 153
             T+N ++   C A     A    +E++ Q  +PN V++N ++   C  G++  A  ++ 
Sbjct: 483 TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+   V  YN L   LF   +   A++L +EM   G+A D + 
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+G CK G + +A+E+F  +        +  Y  LI  L K G+++   +LF    
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R  +  D+V YN +I++    G +D+A ++  +ME K
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 755



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 20/164 (12%)

Query: 218 GALSLYSEMLS--KGIKPDVVIY----------NTLFIGLFEIHQVERAFKLFDEMQRHG 265
            AL+L+  +LS  K + P  V+           N L      +     + +L+  M+   
Sbjct: 388 AALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLS 447

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +   T +    +  L          ++FR    L+  L    +N ++  LC +G+   A 
Sbjct: 448 LPISTASLHPLLSALPSAPAFALFADMFR----LRLPLCTTTFNIMLRHLCSAGKPARAL 503

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           EL R +PR     + VTYN +I   C+ G++  A D+  +M  +
Sbjct: 504 ELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRER 543


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 188/350 (53%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV ++N +I  +C+ G    A+ +F EMA         C+P+  TY T++DGLCKE  +
Sbjct: 186 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK------CEPDVFTYCTLMDGLCKEDRI 239

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L  +M+ E   P+ VT+N LI+G C   D      L   M  +G  PN V++N I
Sbjct: 240 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LC  GK+D+A  LL+ M+     PN   Y TL++G    GR      L  S+E  G 
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 359

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N ++YS LI+G  K ++ E A+ L+ +M+ KG +P++V+Y+ L  GL    +++ A +
Sbjct: 360 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 419

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM   G   + + Y + I G  K G   +A+ +++ +       +   Y+ LI GLC
Sbjct: 420 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 479

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + G+L+ A  ++  +    L  DVV Y+ MIH LC  G ++    LF +M
Sbjct: 480 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 529



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 194/366 (53%), Gaps = 8/366 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++ +  CEP+VFTY TL++GLC+      A+ L +EM          C P++VT
Sbjct: 207 AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG------CFPSSVT 260

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I+GLCK+G + +  +L   M  +   PN VTYN++I+G C     ++A  L   M+
Sbjct: 261 FNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 320

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                PN V++  ++N L K G+  +   LL  + + G   N + Y+TL+ G     +  
Sbjct: 321 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 380

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L+  M   GC+ N+  YS LI+G C+  +++ A  +  EM++KG  P+   Y++L 
Sbjct: 381 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 440

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+    ++A +++ EM ++    +   Y   I GLC++G + EA+ ++  +      
Sbjct: 441 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 500

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSL--PRGVLIADVVTYNIMIHALCADGKMDKAR 360
            D+ AY+ +I GLC +G +++  +LF  +         DVVTYNI++ ALC    +  A 
Sbjct: 501 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAI 560

Query: 361 DLFLDM 366
           DL   M
Sbjct: 561 DLLNSM 566



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 173/332 (52%), Gaps = 43/332 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++++ GC P+  T+N LINGLC+ G  +    L + M      F   C PN V
Sbjct: 241 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM------FLKGCVPNEV 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------- 106
           TY TII+GLC +G +DKA  L  +M      PN VTY +LI+G                 
Sbjct: 295 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 354

Query: 107 -----YANDW---------------NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                +AN++                EA  L+ +M+++G QPN+V ++ +++ LC+ GK+
Sbjct: 355 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 414

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA  +L  M+  G  PNAF Y++L+ GF  TG   +A  ++  M    C  N   YS+L
Sbjct: 415 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL 474

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM--QRH 264
           I+G C++ ++  A+ +++ ML +G++PDVV Y+++  GL     VE   KLF+EM  Q  
Sbjct: 475 IHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQES 534

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
               D   Y   +  LCK   I  A++L  ++
Sbjct: 535 DSQPDVVTYNILLRALCKQNSISHAIDLLNSM 566



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 52/333 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLF---EEMANGNGEFGVV--- 55
           +A +L  ++    C PN  TY TLINGL + G ++  ++L    EE  +   E+      
Sbjct: 311 KAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLI 370

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C+PN V Y+ +IDGLC+EG +D+AKE+  +M ++   
Sbjct: 371 SGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCT 430

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN  TY+SLI GF    +  +A  ++ EM      PN + ++V+++ LC++GK+ EA  +
Sbjct: 431 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 490

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM--ESMGCKHNVFSYSILINGY 210
              M+  G+RP+   Y++++ G C  G V    +LF  M  +    + +V +Y+IL+   
Sbjct: 491 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 550

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE------------------IHQVE 252
           CK   I  A+ L + ML +G  PD++  N     L E                  +H+ +
Sbjct: 551 CKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQ 610

Query: 253 R---AFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           R   A K+ + M +  +  +   +   I  LCK
Sbjct: 611 RIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 643



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 178/366 (48%), Gaps = 42/366 (11%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL--KMKDENINPNV 95
           A+ LF  M +   EF   C+    ++ ++++ + +EG   +A E +        NI+PNV
Sbjct: 134 AIELFGRMVD---EFQ--CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNV 188

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +++N +I   C     + A  +F EM  Q  +P+V ++  +M+ LCK  ++DEA  LL+ 
Sbjct: 189 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 248

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G  P++  +N L++G C  G + R  +L  +M   GC  N  +Y+ +ING C   +
Sbjct: 249 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 308

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+SL   M++    P+ V Y TL  GL +  +      L   ++  G  A+ +AY T
Sbjct: 309 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 368

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL-------- 327
            I GL K     EA+ L++ +     + +I  Y+ LIDGLC+ G+L  A E+        
Sbjct: 369 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 428

Query: 328 -------FRSLPRGVL--------------------IADVVTYNIMIHALCADGKMDKAR 360
                  + SL +G                      + + + Y+++IH LC DGK+ +A 
Sbjct: 429 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 488

Query: 361 DLFLDM 366
            ++  M
Sbjct: 489 MMWTHM 494



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 170/356 (47%), Gaps = 17/356 (4%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T+ +LI     +G       +F+ M     E  V  + N   +  +     K    +KA 
Sbjct: 82  TFYSLIENYANSGDFGTLFQVFDRMKR---ERRVFIEKN---FILVFRAYGKAHLPEKAI 135

Query: 81  ELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV------QPNVVSF 133
           ELF +M DE      V ++NS+++       ++ A    +E  + GV       PNV+SF
Sbjct: 136 ELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA----LEFYECGVGGKTNISPNVLSF 191

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++  +CK G +D A  +   M      P+ F Y TLMDG C   R++ A  L   M+ 
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 251

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  ++++LING CK  ++     L   M  KG  P+ V YNT+  GL    ++++
Sbjct: 252 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 311

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L D M       +   Y T I+GL K G  V+ V L  +L    +  +  AY+ LI 
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 371

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL K  + + A  L++ +       ++V Y+ +I  LC +GK+D+A+++  +M  K
Sbjct: 372 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 427



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 64/239 (26%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   GC PN FTY++LI G  +TG++  A+ +++EMA  N      C PN +
Sbjct: 416 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN------CVPNEI 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND-------WNEA 114
            Y+ +I GLC++G + +A  ++  M    + P+VV Y+S+IHG C A         +NE 
Sbjct: 470 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 529

Query: 115 KC------------------------------LFIEMMDQGVQPNVVSFNVIMNEL---- 140
            C                              L   M+D+G  P++++ N+ +N L    
Sbjct: 530 LCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKL 589

Query: 141 --CKNGK--MDE-------------ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              ++G+  +DE             A++++E+M+Q  + PNA  +  ++   C   +V 
Sbjct: 590 NPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 648


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 195/361 (54%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A +   K+   G EP++ T ++L+NG C +     A+ +  +M     + G+  K + V
Sbjct: 66  SALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME----KMGI--KRDVV 119

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T +ID LCK   V  A E+  +MKD  I+PNVVTY+SLI G C +    +A+    EM
Sbjct: 120 VDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 179

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV++F+ +++   K GK+ +   + ++MIQ+ + PN F Y++L+ G C+  RV
Sbjct: 180 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 239

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M S GC  NV +YS L NG+ K+  ++  + L  +M  +G+  + V  NTL
Sbjct: 240 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 299

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+  +++ A  +F  M  +G+  +  +Y   + GL  NG + +A+  F  ++  + 
Sbjct: 300 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 359

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LDI  Y  +I G+CK+  +K A++LF  L    +  D   Y IMI  L   G   +A  
Sbjct: 360 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 419

Query: 362 L 362
           L
Sbjct: 420 L 420



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 188/354 (53%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+++T N L+N  CR      AL+   +M     + G+  +P+ VT +++++G C    
Sbjct: 45  SPDLYTCNILVNCFCRCFQPSSALSYLGKMM----KLGI--EPDIVTASSLVNGFCLSNS 98

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A  +  +M+   I  +VV    LI   C       A  +   M D+G+ PNVV+++ 
Sbjct: 99  IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 158

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LCK+G++ +A R L  M    + PN   ++ L+D +   G++++ + ++  M  M 
Sbjct: 159 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 218

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NVF+YS LI G C +  ++ A+ +   M+SKG  P+VV Y+TL  G F+  +V+   
Sbjct: 219 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 278

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           KL D+M + GVAA+T +  T I G  + G I  A+ +F  +       +IR+YN ++ GL
Sbjct: 279 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 338

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +G ++ A   F  + +     D++TY IMIH +C    + +A DLF  ++ K
Sbjct: 339 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK 392



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 153/294 (52%), Gaps = 6/294 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  +  +++  G  PNV TY++LI GLC++G    A     EM +          PN 
Sbjct: 135 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK------INPNV 188

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T++ +ID   K G + K   ++  M   +I+PNV TY+SLI+G C  N  +EA  +   
Sbjct: 189 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 248

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PNVV+++ + N   K+ ++D+  +LL+ M Q GV  N    NTL+ G+   G+
Sbjct: 249 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 308

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +F  M S G   N+ SY+I++ G   N E+E ALS +  M       D++ Y  
Sbjct: 309 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 368

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +  G+ +   V+ A+ LF +++   V  D  AY   I  L + G   EA  L R
Sbjct: 369 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 422



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 150/309 (48%), Gaps = 3/309 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN---INPNVVTYNSLIHGFCYANDWNEA 114
           P+ V +  ++  + K    D    L+ ++++     I+P++ T N L++ FC     + A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
                +MM  G++P++V+ + ++N  C +  + +A  +   M ++G++ +  V   L+D 
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C    V  A E+   M+  G   NV +YS LI G CK+  +  A     EM SK I P+
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           V+ ++ L     +  ++ +   ++  M +  +  + + Y + I GLC +  + EA+++  
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       ++  Y+ L +G  KS R+    +L   +P+  + A+ V+ N +I      G
Sbjct: 248 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG 307

Query: 355 KMDKARDLF 363
           K+D A  +F
Sbjct: 308 KIDLALGVF 316



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/280 (23%), Positives = 139/280 (49%), Gaps = 3/280 (1%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-QGVQ--PNVVSFNVIMNELCKNGKMDEA 149
           P++V +N ++        ++    L+  + + +G++  P++ + N+++N  C+  +   A
Sbjct: 8   PSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSA 67

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
              L  M+++G+ P+    ++L++GFCL+  +  A  +   ME MG K +V   +ILI+ 
Sbjct: 68  LSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDT 127

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CKN+ +  AL +   M  +GI P+VV Y++L  GL +  ++  A +   EM    +  +
Sbjct: 128 LCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPN 187

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              +   ID   K G + +   +++ +  +  + ++  Y+ LI GLC   R+  A ++  
Sbjct: 188 VITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLD 247

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +       +VVTY+ + +      ++D    L  DM  +
Sbjct: 248 LMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR 287


>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
 gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
          Length = 485

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A +++L   G  P    +N L+  L R G    A N+F+EM +     GV  +   V
Sbjct: 99  EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS----RGV--RRTVV 152

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ T+I G+C+ G +D A+ L  +M +  + P+V TY +LI G C      +A+ +F +M
Sbjct: 153 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 212

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN V F ++++  CK G  +    L   M + GVRP+A  YN +++G C    +
Sbjct: 213 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 272

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  + V M S G + +  +Y+ LI+GYCK +E++ A+ +   M+++G+  D V Y  L
Sbjct: 273 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 332

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +   A ++  EM   G+  D   Y   ID  C+ G +   + L + ++    
Sbjct: 333 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 392

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  YN +++G CK G++K A  L  ++    +  D +TYNI++   C  GK+    +
Sbjct: 393 KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEE 452

Query: 362 L 362
           L
Sbjct: 453 L 453



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 143/287 (49%)

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           +L++ D  + P    +N L+       +   A+ +F EM  +GV+  VVSFN +++ +C+
Sbjct: 104 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 163

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
            G +D A  L   M + GV P+ + Y  L+ G C  GR+  A  +F  M   G K N   
Sbjct: 164 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 223

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++ILI+ +CK  + E  L L+ EM  +G++PD V YN +  GL     ++ A  +  EM+
Sbjct: 224 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 283

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G+  DT  Y T IDG CK   +  A+E+ + +      LD   Y  LI GL K+GR  
Sbjct: 284 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 343

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  +   +    L  D  TY ++I A C  G +     L  +M+ K
Sbjct: 344 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 390


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/350 (34%), Positives = 188/350 (53%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV ++N +I  +C+ G    A+ +F EMA         C+P+  TY T++DGLCKE  +
Sbjct: 170 PNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQK------CEPDVFTYCTLMDGLCKEDRI 223

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L  +M+ E   P+ VT+N LI+G C   D      L   M  +G  PN V++N I
Sbjct: 224 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LC  GK+D+A  LL+ M+     PN   Y TL++G    GR      L  S+E  G 
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGH 343

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N ++YS LI+G  K ++ E A+ L+ +M+ KG +P++V+Y+ L  GL    +++ A +
Sbjct: 344 HANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKE 403

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM   G   + + Y + I G  K G   +A+ +++ +       +   Y+ LI GLC
Sbjct: 404 ILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLC 463

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + G+L+ A  ++  +    L  DVV Y+ MIH LC  G ++    LF +M
Sbjct: 464 EDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 513



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 194/366 (53%), Gaps = 8/366 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++ +  CEP+VFTY TL++GLC+      A+ L +EM          C P++VT
Sbjct: 191 AIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEG------CFPSSVT 244

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I+GLCK+G + +  +L   M  +   PN VTYN++I+G C     ++A  L   M+
Sbjct: 245 FNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMV 304

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                PN V++  ++N L K G+  +   LL  + + G   N + Y+TL+ G     +  
Sbjct: 305 ASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSE 364

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L+  M   GC+ N+  YS LI+G C+  +++ A  +  EM++KG  P+   Y++L 
Sbjct: 365 EAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLI 424

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+    ++A +++ EM ++    +   Y   I GLC++G + EA+ ++  +      
Sbjct: 425 KGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLR 484

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSL--PRGVLIADVVTYNIMIHALCADGKMDKAR 360
            D+ AY+ +I GLC +G +++  +LF  +         DVVTYNI++ ALC    +  A 
Sbjct: 485 PDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAI 544

Query: 361 DLFLDM 366
           DL   M
Sbjct: 545 DLLNSM 550



 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 173/332 (52%), Gaps = 43/332 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++++ GC P+  T+N LINGLC+ G  +    L + M      F   C PN V
Sbjct: 225 EAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNM------FLKGCVPNEV 278

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------- 106
           TY TII+GLC +G +DKA  L  +M      PN VTY +LI+G                 
Sbjct: 279 TYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSL 338

Query: 107 -----YANDW---------------NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                +AN++                EA  L+ +M+++G QPN+V ++ +++ LC+ GK+
Sbjct: 339 EERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKL 398

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA  +L  M+  G  PNAF Y++L+ GF  TG   +A  ++  M    C  N   YS+L
Sbjct: 399 DEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVL 458

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM--QRH 264
           I+G C++ ++  A+ +++ ML +G++PDVV Y+++  GL     VE   KLF+EM  Q  
Sbjct: 459 IHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQES 518

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
               D   Y   +  LCK   I  A++L  ++
Sbjct: 519 DSQPDVVTYNILLRALCKQNSISHAIDLLNSM 550



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 52/333 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLF---EEMANGNGEFGVV--- 55
           +A +L  ++    C PN  TY TLINGL + G ++  ++L    EE  +   E+      
Sbjct: 295 KAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLI 354

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C+PN V Y+ +IDGLC+EG +D+AKE+  +M ++   
Sbjct: 355 SGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCT 414

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN  TY+SLI GF    +  +A  ++ EM      PN + ++V+++ LC++GK+ EA  +
Sbjct: 415 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 474

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM--ESMGCKHNVFSYSILINGY 210
              M+  G+RP+   Y++++ G C  G V    +LF  M  +    + +V +Y+IL+   
Sbjct: 475 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 534

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE------------------IHQVE 252
           CK   I  A+ L + ML +G  PD++  N     L E                  +H+ +
Sbjct: 535 CKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVRLHKRQ 594

Query: 253 R---AFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           R   A K+ + M +  +  +   +   I  LCK
Sbjct: 595 RIVGAAKIIEVMLQKFLPPNASTWERIIPELCK 627



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 178/366 (48%), Gaps = 42/366 (11%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL--KMKDENINPNV 95
           A+ LF  M +   EF   C+    ++ ++++ + +EG   +A E +        NI+PNV
Sbjct: 118 AIELFGRMVD---EFQ--CRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNV 172

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +++N +I   C     + A  +F EM  Q  +P+V ++  +M+ LCK  ++DEA  LL+ 
Sbjct: 173 LSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDE 232

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M   G  P++  +N L++G C  G + R  +L  +M   GC  N  +Y+ +ING C   +
Sbjct: 233 MQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGK 292

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A+SL   M++    P+ V Y TL  GL +  +      L   ++  G  A+ +AY T
Sbjct: 293 LDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYST 352

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL-------- 327
            I GL K     EA+ L++ +     + +I  Y+ LIDGLC+ G+L  A E+        
Sbjct: 353 LISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKG 412

Query: 328 -------FRSLPRGVL--------------------IADVVTYNIMIHALCADGKMDKAR 360
                  + SL +G                      + + + Y+++IH LC DGK+ +A 
Sbjct: 413 CTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAM 472

Query: 361 DLFLDM 366
            ++  M
Sbjct: 473 MMWTHM 478



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 170/356 (47%), Gaps = 17/356 (4%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T+ +LI     +G       +F+ M     E  V  + N   +  +     K    +KA 
Sbjct: 66  TFYSLIENYANSGDFGTLFQVFDRMKR---ERRVFIEKN---FILVFRAYGKAHLPEKAI 119

Query: 81  ELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV------QPNVVSF 133
           ELF +M DE      V ++NS+++       ++ A    +E  + GV       PNV+SF
Sbjct: 120 ELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRA----LEFYECGVGGKTNISPNVLSF 175

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++  +CK G +D A  +   M      P+ F Y TLMDG C   R++ A  L   M+ 
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQI 235

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  ++++LING CK  ++     L   M  KG  P+ V YNT+  GL    ++++
Sbjct: 236 EGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 295

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L D M       +   Y T I+GL K G  V+ V L  +L    +  +  AY+ LI 
Sbjct: 296 AVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLIS 355

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL K  + + A  L++ +       ++V Y+ +I  LC +GK+D+A+++  +M  K
Sbjct: 356 GLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNK 411



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 112/239 (46%), Gaps = 64/239 (26%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   GC PN FTY++LI G  +TG++  A+ +++EMA  N      C PN +
Sbjct: 400 EAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNN------CVPNEI 453

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND-------WNEA 114
            Y+ +I GLC++G + +A  ++  M    + P+VV Y+S+IHG C A         +NE 
Sbjct: 454 CYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEM 513

Query: 115 KC------------------------------LFIEMMDQGVQPNVVSFNVIMNEL---- 140
            C                              L   M+D+G  P++++ N+ +N L    
Sbjct: 514 LCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKL 573

Query: 141 --CKNGK--MDE-------------ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              ++G+  +DE             A++++E+M+Q  + PNA  +  ++   C   +V 
Sbjct: 574 NPPQDGREFLDELVVRLHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQ 632


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 189/400 (47%), Gaps = 46/400 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A +L   +   GC PN   Y TLI+ L +      AL L EEM      F + C P+  
Sbjct: 236 SACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM------FVMGCMPDVQ 289

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I GLCK   +  A +L  +M      P+ +TY  L+HG C     NEA+ + I++
Sbjct: 290 TFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                 PN    N ++N    +G++ EA   L E MI  G +P+ F YN LM G C  G 
Sbjct: 350 ----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCK---------------------------- 212
           ++ A +L   M   GC+ NV +Y+IL+NG CK                            
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 213 -------NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                   +++  AL+L SEM +KG KPD+  YN+L  GL ++ +++ AF+LF  M   G
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
             A+   Y T I  L + G   +A+ L   +      LD   YN LI   CK G ++   
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           EL+  +    L AD ++ NIMI+ LC  GK+D A +   D
Sbjct: 586 ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRD 625



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 175/339 (51%), Gaps = 8/339 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FG +P++FTYN L++GLC+ G    A +L  EM+         C+PN +TY  +++GLCK
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCK 437

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +++A  +  +M    +  N V YN LI   C     + A  L  EM  +G +P++ +
Sbjct: 438 AGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++  LCK  ++DEA RL   M+  G   N   YNTL+      G   +A  L   M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC  +  +Y+ LI  +CK   IE  L LY +M+  G+  D +  N +  GL ++ +V+
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF+   +    G   D   Y + ++GLCK G I EA+ LF  L++     D   YN  I
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 313 DGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHAL 350
              CK G +  A   F R +  G + ++ +T+N++++ L
Sbjct: 678 SWQCKEGMVNDACSFFYRGIENGFVPSN-LTWNVLVYTL 715



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 178/348 (51%), Gaps = 7/348 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           PN    NTLING   +G    A +   E M N    FG   +P+  TY  ++ GLCKEG 
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMIN----FGF--QPDIFTYNILMHGLCKEGS 405

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A++L  +M      PNV+TY  L++G C A    EA  +  EM  +G+  N V +N 
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC+  K+  A  LL  M   G +P+ F YN+L+ G C   R++ A  LF +M   G
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              N  +Y+ LI+   +    + AL+L ++ML +G   D + YN L     ++  +E+  
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L+++M   G+ ADT +    I+GLCK G +  A E  R      +  DI  YN +++GL
Sbjct: 586 ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           CK GR+K A  LF  L    +  D  TYN  I   C +G ++ A   F
Sbjct: 646 CKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFF 693



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 191/365 (52%), Gaps = 11/365 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G  P VFT+  ++  LC       A +L  +M          C PN++ 
Sbjct: 202 ATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG------CVPNSIV 255

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I  L ++  V +A +L  +M      P+V T+N +IHG C  N  ++A  L   M+
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+ +++  +++ LC+ GK++EA ++L   I+I   PN  + NTL++G+ ++G++ 
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEARKIL---IKIPC-PNNAILNTLINGYVMSGQLK 371

Query: 183 RAEELF-VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A+     +M + G + ++F+Y+IL++G CK   +  A  L +EM  +G +P+V+ Y  L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +E A  +  EM   G+  ++  Y   I  LC+   +  A+ L   +     
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  YN LI GLCK  R+  A+ LF ++     +A+ VTYN +IHAL   G   KA  
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 362 LFLDM 366
           L  DM
Sbjct: 552 LVNDM 556



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 12/350 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y   IN L   G   +   L  +M     E G+V + +   +  I+    K G   +A  
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMK----EEGIVFRESI--FMIIMKHYGKAGQPGQAIR 168

Query: 82  LFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           L L M+   +  P   +Y+ ++      N    A  +F +M+ +GV P V +F ++M  L
Sbjct: 169 LLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C   ++D A  LL  M + G  PN+ VY TL+       +V+ A +L   M  MGC  +V
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDV 288

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +++ +I+G CK  +I  A  L   ML +G  PD + Y  L  GL  I ++  A K+  +
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIK 348

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSG 319
           +       +     T I+G   +G + EA      T+    ++ DI  YN L+ GLCK G
Sbjct: 349 IP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  A +L   + R     +V+TY I+++ LC  G +++A  +  +M A+
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 6/248 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+P++FTYN+LI GLC+      A  LF  M       G V   N VTY T+I  L + 
Sbjct: 490 GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD----GAV--ANNVTYNTLIHALLRR 543

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   KA  L   M       + +TYN LI  FC   +  +   L+ +M+  G+  + +S 
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK GK+D A   L   I  G  P+   YN++++G C  GR+  A  LF  ++ 
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + + F+Y+  I+  CK   +  A S +   +  G  P  + +N L   L +    E 
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN 723

Query: 254 AFKLFDEM 261
            F + DE+
Sbjct: 724 NFFVLDEL 731


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/364 (31%), Positives = 196/364 (53%), Gaps = 8/364 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++ +  C P+ +TY+TL++GLC+      A++L +EM    G F     PN V
Sbjct: 188 KAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEM-QVEGTF-----PNLV 241

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I  LCK+G + +A +L   M  +   PN VTYN+L+HG C      +A  L  +M
Sbjct: 242 AFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM 301

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN V+F  ++N     G+  + +R+L  +   G R N +VY++L+ G C  G+ 
Sbjct: 302 VSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKF 361

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A EL+  M   GC  N   YS LI+G C+  +++ A    SEM +KG  P+   Y++L
Sbjct: 362 NQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSL 421

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G FE     +A  ++ EM  +    +   Y   I+GLCK+G  +EA+ +++ +     
Sbjct: 422 MRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGI 481

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL--PRGVLIADVVTYNIMIHALCADGKMDKA 359
           +LD+ AY+ +I G C +  ++   +LF  +     V+  DV+TYNI+++A C    + +A
Sbjct: 482 KLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRA 541

Query: 360 RDLF 363
            D+ 
Sbjct: 542 IDIL 545



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 187/352 (53%), Gaps = 8/352 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PN  T+N +I  +CR G    A+ +F E+   N      C P+  TY+T++ GLCKE  
Sbjct: 167 HPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRN------CAPDNYTYSTLMHGLCKEER 220

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A  L  +M+ E   PN+V +N LI   C   D   A  L   M  +G  PN V++N 
Sbjct: 221 IDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNA 280

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC  GK+++A  LL  M+     PN   + TL++GF + GR +    + VS+E+ G
Sbjct: 281 LVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARG 340

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + N + YS LI+G CK  +   A+ L+ EM+ KG  P+ ++Y+ L  GL    +++ A 
Sbjct: 341 HRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEAR 400

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
               EM+  G   +++ Y + + G  + G   +A+ +++ +       +   Y+ LI+GL
Sbjct: 401 GFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGL 460

Query: 316 CKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           CK G+   A  +++  L RG+ + DVV Y+ MIH  C    +++   LF  M
Sbjct: 461 CKDGKFMEALMVWKQMLSRGIKL-DVVAYSSMIHGFCNANLVEQGLKLFNQM 511



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 147/319 (46%), Gaps = 43/319 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AA L   + + GC PN  TYN L++GLC  G    A++L  +M +        C PN V
Sbjct: 258 RAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNK------CVPNDV 311

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I+G   +G       + + ++      N   Y+SLI G C    +N+A  L+ EM
Sbjct: 312 TFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEM 371

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  PN + ++ +++ LC+ GK+DEA   L  M   G  PN+F Y++LM G+   G  
Sbjct: 372 VGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDS 431

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--------- 232
           ++A  ++  M +  C HN   YSILING CK+ +   AL ++ +MLS+GIK         
Sbjct: 432 HKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSM 491

Query: 233 ----------------------------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
                                       PDV+ YN L         + RA  + + M   
Sbjct: 492 IHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQ 551

Query: 265 GVAADTWAYRTFIDGLCKN 283
           G   D      F+  L +N
Sbjct: 552 GCDPDFITCDIFLKTLREN 570



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 159/335 (47%), Gaps = 43/335 (12%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A++LF  M    GEF   CK    ++ ++++ + +EG  ++A E +          +VV 
Sbjct: 115 AVDLFHRMW---GEFQ--CKQTVKSFNSVLNVIVQEGLFNRALEFY---------NHVVA 160

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
             SL                        + PN ++FN+++  +C+ G +D+A   +E+  
Sbjct: 161 SKSL-----------------------NIHPNALTFNLVIKAMCRLGLVDKA---IEVFR 194

Query: 158 QIGVR---PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           +I +R   P+ + Y+TLM G C   R++ A  L   M+  G   N+ ++++LI+  CK  
Sbjct: 195 EIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKG 254

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           ++  A  L   M  KG  P+ V YN L  GL    ++E+A  L ++M  +    +   + 
Sbjct: 255 DLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFG 314

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I+G    G   +   +  +L    +  +   Y+ LI GLCK G+   A EL++ +   
Sbjct: 315 TLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGK 374

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               + + Y+ +I  LC +GK+D+AR    +M+ K
Sbjct: 375 GCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNK 409



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 7/222 (3%)

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVN---RAEELFVSM-ESMGCKHNVFSYSILI 207
           L E++ Q+      F+    +  F   G+ +   +A +LF  M     CK  V S++ ++
Sbjct: 80  LEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVL 139

Query: 208 NGYCKNKEIEGALSLYSEML---SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           N   +      AL  Y+ ++   S  I P+ + +N +   +  +  V++A ++F E+   
Sbjct: 140 NVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLR 199

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
             A D + Y T + GLCK   I EAV L   +++     ++ A+N LI  LCK G L  A
Sbjct: 200 NCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRA 259

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +L  ++     + + VTYN ++H LC  GK++KA  L   M
Sbjct: 260 AKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM 301



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 94/193 (48%), Gaps = 29/193 (15%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C  N   Y+ LINGLC+ G  + AL ++++M +         K + V Y+++I G C   
Sbjct: 446 CIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRG------IKLDVVAYSSMIHGFCNAN 499

Query: 75  FVDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            V++  +LF +M  +   + P+V+TYN L++ FC       A  +   M+DQG  P+ ++
Sbjct: 500 LVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFIT 559

Query: 133 FNVIMNELCKN------GK--MDE-------------ASRLLELMIQIGVRPNAFVYNTL 171
            ++ +  L +N      G+  +DE             AS+++E+M+   + P A  +  +
Sbjct: 560 CDIFLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMV 619

Query: 172 MDGFCLTGRVNRA 184
           +   C    V +A
Sbjct: 620 VQQVCKPKNVRKA 632


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 130/400 (32%), Positives = 189/400 (47%), Gaps = 46/400 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A +L   +   GC PN   Y TLI+ L +      AL L EEM      F + C P+  
Sbjct: 236 SACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEM------FVMGCMPDVQ 289

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I GLCK   +  A +L  +M      P+ +TY  L+HG C     NEA+ + I++
Sbjct: 290 TFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKI 349

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                 PN    N ++N    +G++ EA   L E MI  G +P+ F YN LM G C  G 
Sbjct: 350 ----PCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGS 405

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCK---------------------------- 212
           ++ A +L   M   GC+ NV +Y+IL+NG CK                            
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 213 -------NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                   +++  AL+L SEM +KG KPD+  YN+L  GL ++ +++ AF+LF  M   G
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
             A+   Y T I  L + G   +A+ L   +      LD   YN LI   CK G ++   
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           EL+  +    L AD ++ NIMI+ LC  GK+D A +   D
Sbjct: 586 ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRD 625



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 196/394 (49%), Gaps = 38/394 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ V GC P+V T+N +I+GLC+      A  L + M    G +     P+ +
Sbjct: 271 EALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML-LRGFY-----PDNM 324

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN------------------------------- 90
           TY  ++ GLC+ G +++A+++ +K+   N                               
Sbjct: 325 TYGFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINF 384

Query: 91  -INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
              P++ TYN L+HG C     + A+ L  EM  +G +PNV+++ +++N LCK G ++EA
Sbjct: 385 GFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEA 444

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             +L  M   G+  N+ +YN L+   C   +V+ A  L   M + GCK ++F+Y+ LI G
Sbjct: 445 GLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYG 504

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK   I+ A  L+  ML  G   + V YNTL   L      ++A  L ++M   G   D
Sbjct: 505 LCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   I   CK G I + +EL+  + +     D  + N +I+GLCK G++  A+E  R
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
                  + D+VTYN +++ LC  G++ +A +LF
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLF 658



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/339 (32%), Positives = 175/339 (51%), Gaps = 8/339 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FG +P++FTYN L++GLC+ G    A +L  EM+         C+PN +TY  +++GLCK
Sbjct: 384 FGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRG------CEPNVITYAILVNGLCK 437

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +++A  +  +M    +  N V YN LI   C     + A  L  EM  +G +P++ +
Sbjct: 438 AGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFT 497

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++  LCK  ++DEA RL   M+  G   N   YNTL+      G   +A  L   M 
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC  +  +Y+ LI  +CK   IE  L LY +M+  G+  D +  N +  GL ++ +V+
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF+   +    G   D   Y + ++GLCK G I EA+ LF  L++     D   YN  I
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677

Query: 313 DGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHAL 350
              CK G +  A   F R +  G + ++ +T+N++++ L
Sbjct: 678 SWQCKEGMVNDACLFFYRGIENGFVPSN-LTWNVLVYTL 715



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 177/344 (51%), Gaps = 7/344 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           PN    NTLING   +G    A +   E M N    FG   +P+  TY  ++ GLCKEG 
Sbjct: 352 PNNAILNTLINGYVMSGQLKEAQSFLNETMIN----FGF--QPDIFTYNILMHGLCKEGS 405

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A++L  +M      PNV+TY  L++G C A    EA  +  EM  +G+  N V +N 
Sbjct: 406 LSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNC 465

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC+  K+  A  LL  M   G +P+ F YN+L+ G C   R++ A  LF +M   G
Sbjct: 466 LICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDG 525

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              N  +Y+ LI+   +    + AL+L ++ML +G   D + YN L     ++  +E+  
Sbjct: 526 AVANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGL 585

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L+++M   G+ ADT +    I+GLCK G +  A E  R      +  DI  YN +++GL
Sbjct: 586 ELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGL 645

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           CK GR+K A  LF  L    +  D  TYN  I   C +G ++ A
Sbjct: 646 CKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDA 689



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 191/365 (52%), Gaps = 11/365 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G  P VFT+  ++  LC       A +L  +M          C PN++ 
Sbjct: 202 ATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHG------CVPNSIV 255

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I  L ++  V +A +L  +M      P+V T+N +IHG C  N  ++A  L   M+
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+ +++  +++ LC+ GK++EA ++L   I+I   PN  + NTL++G+ ++G++ 
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEARKIL---IKIPC-PNNAILNTLINGYVMSGQLK 371

Query: 183 RAEELF-VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A+     +M + G + ++F+Y+IL++G CK   +  A  L +EM  +G +P+V+ Y  L
Sbjct: 372 EAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAIL 431

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +E A  +  EM   G+  ++  Y   I  LC+   +  A+ L   +     
Sbjct: 432 VNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGC 491

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  YN LI GLCK  R+  A+ LF ++     +A+ VTYN +IHAL   G   KA  
Sbjct: 492 KPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALT 551

Query: 362 LFLDM 366
           L  DM
Sbjct: 552 LVNDM 556



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 165/350 (47%), Gaps = 12/350 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y   IN L   G   +   L  +M     E G+V + +   +  I+    K G   +A  
Sbjct: 115 YYVFINKLGAIGKFKLIDKLLMQMK----EEGIVFRESI--FMIIMKHYGKAGQPGQAIR 168

Query: 82  LFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           L L M+   +  P   +Y+ ++      N    A  +F +M+ +GV P V +F ++M  L
Sbjct: 169 LLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKAL 228

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C   ++D A  LL  M + G  PN+ VY TL+       +V+ A +L   M  MGC  +V
Sbjct: 229 CMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDV 288

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +++ +I+G CK  +I  A  L   ML +G  PD + Y  L  GL  I ++  A K+  +
Sbjct: 289 QTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIK 348

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSG 319
           +       +     T I+G   +G + EA      T+    ++ DI  YN L+ GLCK G
Sbjct: 349 IP----CPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEG 404

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  A +L   + R     +V+TY I+++ LC  G +++A  +  +M A+
Sbjct: 405 SLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSAR 454



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 6/248 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+P++FTYN+LI GLC+      A  LF  M       G V   N VTY T+I  L + 
Sbjct: 490 GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLD----GAV--ANNVTYNTLIHALLRR 543

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   KA  L   M       + +TYN LI  FC   +  +   L+ +M+  G+  + +S 
Sbjct: 544 GAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISC 603

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N LCK GK+D A   L   I  G  P+   YN++++G C  GR+  A  LF  ++ 
Sbjct: 604 NIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQV 663

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + + F+Y+  I+  CK   +  A   +   +  G  P  + +N L   L +    E 
Sbjct: 664 EGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQEN 723

Query: 254 AFKLFDEM 261
            F + DE+
Sbjct: 724 NFFVLDEL 731


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 195/361 (54%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L M++   G   NV  YNT+I+   + GH + A+   E M     E G  CKP+ VTY T
Sbjct: 296 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI----ECG--CKPDIVTYNT 349

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G C++G V +A +L  +   + + PN  +Y  LIH +C    ++ A    IEM ++G
Sbjct: 350 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 409

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +P++V++  +++ L   G++D A  + E M++ GV P+A +YN LM G C   ++  A+
Sbjct: 410 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 469

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M       + F Y+ L++G+ +N  ++ A  L+   + KG+ P +V YN +  G 
Sbjct: 470 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 529

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A    + M++  +A D + Y T IDG  K   +  A ++FR +  +K + ++
Sbjct: 530 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 589

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  LI+G C+ G L  + ++FR +    L+ +VVTY+I+I + C + K+  A   F +
Sbjct: 590 VTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEE 649

Query: 366 M 366
           M
Sbjct: 650 M 650



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 107/341 (31%), Positives = 182/341 (53%), Gaps = 6/341 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+P++ TYNTLI+G CR G    A  L E+ A G G       PN  +YT +I   CK+
Sbjct: 339 GCKPDIVTYNTLISGSCRDGKVSEADQLLEQ-ALGKGLM-----PNKFSYTPLIHAYCKQ 392

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  D+A    ++M +    P++VTY +L+HG   A + + A  +  +M+++GV P+   +
Sbjct: 393 GGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIY 452

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++M+ LCK  K+  A  LL  M+   V P+AFVY TL+DGF   G ++ A +LF     
Sbjct: 453 NILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIE 512

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    +  Y+ +I GYCK   ++ A++  + M  + + PD   Y+T+  G  + H ++ 
Sbjct: 513 KGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDG 572

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K+F EM +     +   Y + I+G C+ G +  ++++FR ++      ++  Y+ LI 
Sbjct: 573 AQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIG 632

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             CK  +L  A   F  +     + + VT+N +++    +G
Sbjct: 633 SFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNG 673



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 176/353 (49%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+  YNTLI+G C+ G   +A  LF E+       G +  P   TY  II+G CK+
Sbjct: 234 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK----GFL--PTVETYGAIINGFCKK 287

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G       L ++M    +  NV  YN++I          +A      M++ G +P++V++
Sbjct: 288 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 347

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C++GK+ EA +LLE  +  G+ PN F Y  L+  +C  G  +RA    + M  
Sbjct: 348 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 407

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K ++ +Y  L++G     E++ AL++  +ML +G+ PD  IYN L  GL +  ++  
Sbjct: 408 RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPA 467

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L  EM    V  D + Y T +DG  +NG + EA +LF           I  YN +I 
Sbjct: 468 AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIK 527

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G CK G +K A      + +  L  D  TY+ +I        +D A+ +F +M
Sbjct: 528 GYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREM 580



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 158/327 (48%), Gaps = 21/327 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   YN L++GLC+      A  L  EM + +        P+   Y T++DG  + 
Sbjct: 444 GVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQS------VLPDAFVYATLVDGFIRN 497

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A++LF    ++ +NP +V YN++I G+C      +A      M  + + P+  ++
Sbjct: 498 GNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTY 557

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + +++   K   +D A ++   M+++  +PN   Y +L++GFC  G ++R+ ++F  M++
Sbjct: 558 STVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQA 617

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL-------- 245
            G   NV +YSILI  +CK  ++  A S + EML     P+ V +N L  G         
Sbjct: 618 CGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAI 677

Query: 246 ------FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                 F+ ++       F  M   G A  + AY + +  LC+ G    A++L   +   
Sbjct: 678 SEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSK 737

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWE 326
               D  ++  L+ G+C  GR K  W+
Sbjct: 738 GCIPDSVSFVALLHGVCLEGRSK-EWK 763



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 155/317 (48%), Gaps = 7/317 (2%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y++++  L +     + + +   M+ E ++P     + +I  +  +    +A  L+
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 119 IEMMDQGVQ-PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN----TLMD 173
             ++      P+V++ N ++N L K G+++ A +L + M++I    +  V N     ++ 
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C  G++    +L       GC  N+  Y+ LI+GYCK  ++E A  L+ E+  KG  P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            V  Y  +  G  +    +   +L  EM   G+  +   Y T ID   K+G+IV+AVE  
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCA 352
             +     + DI  YN LI G C+ G++  A +L  ++L +G L+ +  +Y  +IHA C 
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG-LMPNKFSYTPLIHAYCK 391

Query: 353 DGKMDKARDLFLDMEAK 369
            G  D+A +  ++M  +
Sbjct: 392 QGGYDRASNWLIEMTER 408



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 110/254 (43%), Gaps = 36/254 (14%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++    C+PNV TY +LING CR G    +L +F EM       G+V  PN VT
Sbjct: 573 AQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQ----ACGLV--PNVVT 626

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY---------ANDWNE 113
           Y+ +I   CKE  +  A   F +M      PN VT+N L++GF            N++ E
Sbjct: 627 YSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQE 686

Query: 114 AKC-----LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
            K       F  M+  G  P   ++N I+  LC+ G    A +L   M   G  P++  +
Sbjct: 687 NKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSF 746

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             L+ G CL GR    + +      + C  N     I +N            S+  + L 
Sbjct: 747 VALLHGVCLEGRSKEWKNI------VSCNLNERELQIAVN----------YSSILDQYLP 790

Query: 229 KGIKPDVVIYNTLF 242
           +G     VI  T+F
Sbjct: 791 QGTSEASVILQTMF 804



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 21/172 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVA--------------LNLFEEMA 46
           ++AA+ F ++ +  C PN  T+N L+NG  + G   ++              LN F  M 
Sbjct: 641 IDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMI 700

Query: 47  NGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 106
           +          P +  Y +I+  LC+ G    A +L  KM  +   P+ V++ +L+HG C
Sbjct: 701 SDG------WAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVC 754

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                 E K +    +++      V+++ I+++    G   EAS +L+ M +
Sbjct: 755 LEGRSKEWKNIVSCNLNERELQIAVNYSSILDQYLPQG-TSEASVILQTMFE 805


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 183/355 (51%), Gaps = 11/355 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   N  TY+ L++GLC+      A+ L E MA    E G  C P  VTY +II G C+ 
Sbjct: 104 GMAANAITYSALVDGLCKCERLDEAVALVETMA----ERG--CAPTVVTYNSIITGFCRA 157

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A     +M  E  +P+++TY +LI GFC + D      L  E+  +G  P++V++
Sbjct: 158 RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTY 217

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + +++ LCK G++ +A  + E   ++   P A  YN+L+ G+C  G ++ A  L   M  
Sbjct: 218 STVIDGLCKAGRLRDAVDIFE---EMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C  +V +Y+ L++ +CK   ++ A  L+ +M++  + PDVV + +L  GL    ++E 
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L +E+ R G     + Y   +DG CK   + +A EL    R   +  +   YN L+ 
Sbjct: 335 ALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVA 394

Query: 314 GLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C++GR   A +    L    G     V  Y I++ ALC DG+ D A   + +M
Sbjct: 395 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 449



 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 182/347 (52%), Gaps = 10/347 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P    +N +I GLCR G    AL ++ +M + +        P+ +TYT ++ GL K   +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-------PPDFLTYTKLVHGLSKARRL 55

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A ++  +M      P+  T   ++   C  +  ++A+ L  EM+ +G+  N ++++ +
Sbjct: 56  RDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 115

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK  ++DEA  L+E M + G  P    YN+++ GFC   RV+ A      M + GC
Sbjct: 116 VDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGC 175

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +Y+ LI G+CK++++   L L  E+  +G  PD+V Y+T+  GL +  ++  A  
Sbjct: 176 HPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F+EM     A     Y + I G C+ G + EA+ L   +   K   D+  Y  L+   C
Sbjct: 236 IFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFC 292

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K GRL  A+ELF+ +    L  DVVT+  ++  LC +G+M+ A +L 
Sbjct: 293 KMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 339



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 183/346 (52%), Gaps = 15/346 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  T   ++  LC       A  L EEM +           N +TY+ ++DGLCK   +
Sbjct: 72  PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG------MAANAITYSALVDGLCKCERL 125

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L   M +    P VVTYNS+I GFC A   +EA     +M+ +G  P+++++  +
Sbjct: 126 DEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTAL 185

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   CK+  +     LL  + + G  P+   Y+T++DG C  GR+  A ++F   E M C
Sbjct: 186 IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF---EEMSC 242

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
                +Y+ LI GYC+  +++ A+ L  +M+     PDVV Y TL     ++ +++ A++
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF +M  + ++ D   + + +DGLC  G + +A+EL   +        I  YNC++DG C
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 317 KSGRLKIAWEL---FRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K+ +++ A EL   FRS  RG  + + VTYNI++   C  G+ D+A
Sbjct: 363 KANQVRKAEELVADFRS--RG-FVPNTVTYNILVAGCCRAGRTDQA 405



 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 190/392 (48%), Gaps = 34/392 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------NGEF 52
           EA AL   +   GC P V TYN++I G CR      A    E+M A G            
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186

Query: 53  GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           G  CK                    P+ VTY+T+IDGLCK G +  A ++F +M   +  
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM---SCA 243

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P  +TYNSLI G+C A D +EA  L  +M+D    P+VV++  +M+  CK G++D+A  L
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M+   + P+   + +L+DG C  GR+  A EL   +   GC   +++Y+ +++GYCK
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCK 363

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++  A  L ++  S+G  P+ V YN L  G     + ++A +  D++   G    T  
Sbjct: 364 ANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSV 423

Query: 273 --YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   +D LC++G   +AV+ +  +    Y      +  ++  LCK+ + + A EL   
Sbjct: 424 AMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEE 483

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           + +        T + ++ A C  G + KA +L
Sbjct: 484 MIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 515



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 160/311 (51%), Gaps = 4/311 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P T+ +  +I GLC+ G +  A  ++ +M D +  P+ +TY  L+HG   A    +A  +
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM+     P+  +  V++  LC   ++D+A  L+E M+  G+  NA  Y+ L+DG C 
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R++ A  L  +M   GC   V +Y+ +I G+C+ + ++ A     +M+++G  PD++ 
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G  +   V R  +L  E+ R G   D   Y T IDGLCK G + +AV++F  + 
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                +    YN LI G C++G +  A  L   +       DVVTY  ++ A C  G++D
Sbjct: 242 CAPTAI---TYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLD 298

Query: 358 KARDLFLDMEA 368
            A +LF  M A
Sbjct: 299 DAYELFQQMVA 309



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 160/322 (49%), Gaps = 46/322 (14%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P++ TY+T+I+GLC+ G    A+++FEEM+         C P  +TY ++I G C+ 
Sbjct: 209 GFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---------CAPTAITYNSLIGGYCRA 259

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A  L  KM D+   P+VVTY +L+  FC     ++A  LF +M+   + P+VV+F
Sbjct: 260 GDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTF 319

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++ LC  G+M++A  LLE + + G  P  + YN ++DG+C   +V +AEEL     S
Sbjct: 320 TSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRS 379

Query: 194 MG-------------------------------------CKHNVFSYSILINGYCKNKEI 216
            G                                     C  +V  Y+I+++  C++   
Sbjct: 380 RGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRT 439

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A+  Y EM+ +G  P    + T+   L + HQ ++A +L +EM ++G           
Sbjct: 440 DDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAV 499

Query: 277 IDGLCKNGYIVEAVELFRTLRI 298
           +   C+ G I +A EL   LR+
Sbjct: 500 VSAYCRAGMIQKADELASELRL 521


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  204 bits (519), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 187/352 (53%), Gaps = 6/352 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C+P V TY  LI      G    AL L +EM +         KP+  TY TII G+CKEG
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTIIRGMCKEG 277

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD+A E+   ++ +   P+V++YN L+        W E + L  +M  +   PNVV+++
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++  LC++GK++EA  LL+LM + G+ P+A+ Y+ L+  FC  GR++ A E   +M S 
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ ++   CKN + + AL ++ ++   G  P+   YNT+F  L+      RA
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +  EM  +G+  D   Y + I  LC+ G + EA EL   +R  ++   +  YN ++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            CK+ R++ A  +  S+       +  TY ++I  +   G   +A +L  D+
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 178/359 (49%), Gaps = 7/359 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L  FG +P+VF YN LING C+      A  + + M + +        P+TVTY  +I  
Sbjct: 150 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGS 202

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC  G +D A ++  ++  +N  P V+TY  LI         +EA  L  EM+ +G++P+
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           + ++N I+  +CK G +D A  ++  +   G  P+   YN L+      G+    E+L  
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M S  C  NV +YSILI   C++ +IE A++L   M  KG+ PD   Y+ L        
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +++ A +  + M   G   D   Y T +  LCKNG   +A+E+F  L  +    +  +YN
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +   L  SG    A  +   +    +  D +TYN MI  LC +G +D+A +L +DM +
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 6/332 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +P++FTYNT+I G+C+ G    A  +   +          C+P+ +
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG------CEPDVI 299

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++  L  +G  ++ ++L  KM  E  +PNVVTY+ LI   C      EA  L   M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+  S++ ++   C+ G++D A   LE MI  G  P+   YNT++   C  G+ 
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A E+F  +  +GC  N  SY+ + +    + +   AL +  EM+S GI PD + YN++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L     V+ AF+L  +M+          Y   + G CK   I +A+ +  ++     
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
             +   Y  LI+G+  +G    A EL   L R
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 36/328 (10%)

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+ G   ++  L   M  +  NP+V+    LI GF    +  +A    +E++++  QP+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA-VRVMEILEKFGQPDV 158

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            ++N ++N  CK  ++D+A+R+L+ M      P+   YN ++   C  G+++ A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           + S  C+  V +Y+ILI        ++ AL L  EMLS+G+KPD+  YNT+  G+ +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 251 VERAFKLFDEMQRHGVAADT---------------W--------------------AYRT 275
           V+RAF++   ++  G   D                W                     Y  
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I  LC++G I EA+ L + ++      D  +Y+ LI   C+ GRL +A E   ++    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLF 363
            + D+V YN ++  LC +GK D+A ++F
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIF 426



 Score =  138 bits (347), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 139/269 (51%), Gaps = 1/269 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           + H  C + ++ E+  L   M+ +G  P+V+    ++        + +A R++E++ + G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            +P+ F YN L++GFC   R++ A  +   M S     +  +Y+I+I   C   +++ AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            + +++LS   +P V+ Y  L         V+ A KL DEM   G+  D + Y T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G +  A E+ R L +   E D+ +YN L+  L   G+ +   +L   +       +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VTY+I+I  LC DGK+++A +L   M+ K
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEK 362



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 9/188 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNT 60
           +A  +F KL   GC PN  +YNT+ + L  +G  I AL++  E M+NG         P+ 
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG-------IDPDE 473

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY ++I  LC+EG VD+A EL + M+    +P+VVTYN ++ GFC A+   +A  +   
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G +PN  ++ V++  +   G   EA  L   +++I    + + +  L   F L   
Sbjct: 534 MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA-ISEYSFKRLHRTFPLLNV 592

Query: 181 VNRAEELF 188
           + R+ + F
Sbjct: 593 LQRSSQTF 600



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  + +++   G +P+  TYN++I+ LCR G    A  L  +M   + EF     P+ 
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR--SCEF----HPSV 508

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VTY  ++ G CK   ++ A  +   M      PN  TY  LI G  +A    EA
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 184/351 (52%), Gaps = 6/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TYNT+I G C  G    AL++  EM    G       PN  TY T+I G CK G V
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGRV 571

Query: 77  DKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           D+A ++F +M  +  + P  V YN+LI G+C     + A      M+++GV   V ++N+
Sbjct: 572 DEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNL 631

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L  +G+  EA  L+E M   G+ P+ F YN L++G C  G V +A E+F +M   G
Sbjct: 632 LVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRG 691

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            +  V +Y+ LI    K  +++    L+ E + +GI+PD+V+YN L         ++RAF
Sbjct: 692 VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAF 751

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+  YN LI G 
Sbjct: 752 EIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGY 811

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              G +K A  +   +        ++TYN +I  LC +G+ D A ++  +M
Sbjct: 812 SMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 862



 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 176/362 (48%), Gaps = 18/362 (4%)

Query: 3   AAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           A ALF    +LR+  C     T+N ++  LC  G    AL L  +M           +PN
Sbjct: 472 AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 518

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            VTY T+I G C  G V  A ++  +M++   I PN  TY ++I G+C     +EA  +F
Sbjct: 519 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 578

Query: 119 IEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            EM+ +G V+P  V +N ++   C  GK+D A    + M++ GV      YN L+    +
Sbjct: 579 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 638

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR   A EL   M   G   +VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 639 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 698

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D   YN L+ GLC  GR+  A +L   +    +  D+VTYN +I      G + 
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818

Query: 358 KA 359
            A
Sbjct: 819 DA 820



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 136/244 (55%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+VFTYN LING C+ G+   AL +FE M+      GV  +   V
Sbjct: 644 EAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS----RRGV--RATVV 697

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I  L K+G V +  +LF +     I P++V YN+LI+    + + + A  +  EM
Sbjct: 698 TYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 757

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ V++N +M  LC  G++DEA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 758 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDV 817

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI PD   Y +L
Sbjct: 818 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 877

Query: 242 FIGL 245
             GL
Sbjct: 878 IEGL 881



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 148/284 (52%), Gaps = 10/284 (3%)

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           L+ +MK  ++  +  + + L+     A     A  LF +M    +     +FN+++  LC
Sbjct: 444 LYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLC 499

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNV 200
             GK    +R LEL+ Q+  RPNA  YNT++ GFC  GRV  A ++   M E  G   N 
Sbjct: 500 SAGK---PARALELLRQM-PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQ 555

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           ++Y  +I+G+CK   ++ A+ ++ EML+KG +KP+ V+YN L  G  +  +++ A    D
Sbjct: 556 YTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRD 615

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M   GVA     Y   +  L  +G   EA EL   +       D+  YN LI+G CK G
Sbjct: 616 RMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEG 675

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +K A E+F ++ R  + A VVTY  +I+AL   G++ +   LF
Sbjct: 676 NVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLF 719



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 6/277 (2%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL- 153
             T+N ++   C A     A    +E++ Q  +PN V++N ++   C  G++  A  ++ 
Sbjct: 488 TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+   V  YN L   LF   +   A++L +EM   G+A D + 
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+G CK G + +A+E+F  +        +  Y  LI  L K G+++   +LF    
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R  +  D+V YN +I++    G +D+A ++  +ME K
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 760



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 68/164 (41%), Gaps = 20/164 (12%)

Query: 218 GALSLYSEMLS--KGIKPDVVIY----------NTLFIGLFEIHQVERAFKLFDEMQRHG 265
            AL+L+  +LS  K + P  V+           N L      +     + +L+  M+   
Sbjct: 393 AALALFKSVLSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLS 452

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +   T +    +  L          ++FR    L+  L    +N ++  LC +G+   A 
Sbjct: 453 LPISTASLHPLLSALPSAPAFALFADMFR----LRLPLCTTTFNIMLRHLCSAGKPARAL 508

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           EL R +PR     + VTYN +I   C+ G++  A D+  +M  +
Sbjct: 509 ELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRER 548


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 196/362 (54%), Gaps = 17/362 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + ++  G  P    +N +I GLCR G    AL ++ +M + +        P+ +
Sbjct: 98  EAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-------PPDFL 150

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++ GL K G +  A ++  +M      P+  T   ++   C  +  ++A+ L  EM
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEA-SRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +G+  N ++++ +++ LCK  ++DEA + LL  + + G  P+   Y+T++DG C  GR
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++F   E M C     +Y+ LI GYC+  +++ A+ L  +M+     PDV+ Y T
Sbjct: 271 LRDAVDIF---EEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTT 327

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     ++ +++ A++LF +M  + ++ D   + + +DGLC  G + +A+EL   +    
Sbjct: 328 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 387

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWEL---FRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               I  YNC++DG CKS +++ A EL   FRS  RG  + + VTYNI++   C  G+ D
Sbjct: 388 CPPTIYTYNCVVDGYCKSNQVRKAEELVADFRS--RG-FVPNTVTYNILVAGCCRAGRTD 444

Query: 358 KA 359
           +A
Sbjct: 445 QA 446



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 182/359 (50%), Gaps = 12/359 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++R  G  P+    NT++  LC    T  A+ LF++MA    E G V   N  TY  
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMA----ELGAV---NHTTYYN 85

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I  LCK   +D+A  L L MK   +NP  + +N +I G C A     A  ++ +M D  
Sbjct: 86  LIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMND-A 144

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+ +++  +++ L K G++ +A ++L+ M+     P+      ++   CL  RV+ A 
Sbjct: 145 HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDAR 204

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS-LYSEMLSKGIKPDVVIYNTLFIG 244
           EL   M   G   N  +YS L++G CK + ++ A++ L  E+  +G  PD+V Y+T+  G
Sbjct: 205 ELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDG 264

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  ++  A  +F+EM     A     Y + I G C+ G + EA+ L   +       D
Sbjct: 265 LCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPD 321

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +  Y  L+   CK GRL  A+ELF+ +    L  DVVT+  ++  LC +G+M+ A +L 
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 380



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 169/335 (50%), Gaps = 47/335 (14%)

Query: 2   EAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EA AL + ++   G  P++ TY+T+I+GLC+ G    A+++FEEM+         C P  
Sbjct: 237 EAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---------CAPTA 287

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY ++I G C+ G +D+A  L  KM D+N  P+V+TY +L+  FC     ++A  LF +
Sbjct: 288 ITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQ 347

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   + P+VV+F  +++ LC  G+M++A  LLE + + G  P  + YN ++DG+C + +
Sbjct: 348 MVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQ 407

Query: 181 VNRAEELFVSMESMG-------------------------------------CKHNVFSY 203
           V +AEEL     S G                                     C  +V  Y
Sbjct: 408 VRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMY 467

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +I+++  C++   + A+  Y EM+ +G  P    + T+   L + HQ ++A +L +EM +
Sbjct: 468 AIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIK 527

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +G           +   C+ G I +A EL   LR+
Sbjct: 528 YGHTPGPGTCDAVVSAYCRAGMIQKADELASELRL 562



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 172/355 (48%), Gaps = 45/355 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGH--TIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           G   N  TY+ L++GLC+       VAL L E    G         P+ VTY+T+IDGLC
Sbjct: 214 GMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGF-------TPDIVTYSTVIDGLC 266

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           K G +  A ++F +M   +  P  +TYNSLI G+C A D +EA  L  +M+D    P+V+
Sbjct: 267 KAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVI 323

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++  +M+  CK G++D+A  L + M+   + P+   + +L+DG C  GR+  A EL   +
Sbjct: 324 TYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              GC   +++Y+ +++GYCK+ ++  A  L ++  S+G  P+ V YN L  G     + 
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           ++A +  D++   G             G C                       +  Y  +
Sbjct: 444 DQALQYLDQLNSEG-------------GPCPTS--------------------VAMYAII 470

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +D LC+ GR   A + +  + +   +    T+  ++ ALC   +  +A +L  +M
Sbjct: 471 LDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 525


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 187/352 (53%), Gaps = 6/352 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C+P V TY  LI      G    AL L +EM +         KP+  TY TII G+CKEG
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTIIRGMCKEG 277

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD+A E+   ++ +   P+V++YN L+        W E + L  +M  +   PNVV+++
Sbjct: 278 MVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++  LC++GK++EA  LL+LM + G+ P+A+ Y+ L+  FC  GR++ A E   +M S 
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ ++   CKN + + AL ++ ++   G  P+   YNT+F  L+      RA
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +  EM  +G+  D   Y + I  LC+ G + EA EL   +R  ++   +  YN ++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            CK+ R++ A  +  S+       +  TY ++I  +   G   +A +L  D+
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 178/359 (49%), Gaps = 7/359 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L  FG +P+VF YN LING C+      A  + + M + +        P+TVTY  +I  
Sbjct: 150 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGS 202

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC  G +D A ++  ++  +N  P V+TY  LI         +EA  L  EM+ +G++P+
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           + ++N I+  +CK G +D A  ++  +   G  P+   YN L+      G+    E+L  
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMT 322

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M S  C  NV +YSILI   C++ +IE A++L   M  KG+ PD   Y+ L        
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +++ A +  + M   G   D   Y T +  LCKNG   +A+E+F  L  +    +  +YN
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +   L  SG    A  +   +    +  D +TYN MI  LC +G +D+A +L +DM +
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 153/320 (47%), Gaps = 29/320 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  L  ++   G +P++FTYNT+I G+C+ G    A  +   +     E  V+      
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILL 305

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C PN VTY+ +I  LC++G +++A  L   MK++ + 
Sbjct: 306 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 365

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  +Y+ LI  FC     + A      M+  G  P++V++N ++  LCKNGK D+A  +
Sbjct: 366 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 425

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              + ++G  PN+  YNT+      +G   RA  + + M S G   +  +Y+ +I+  C+
Sbjct: 426 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCR 485

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A  L  +M S    P VV YN + +G  + H++E A  + + M  +G   +   
Sbjct: 486 EGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETT 545

Query: 273 YRTFIDGLCKNGYIVEAVEL 292
           Y   I+G+   GY  EA+EL
Sbjct: 546 YTVLIEGIGFAGYRAEAMEL 565



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 36/328 (10%)

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+ G   ++  L   M  +  NP+V+    LI GF    +  +A    +E++++  QP+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA-VRVMEILEKFGQPDV 158

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            ++N ++N  CK  ++D+A+R+L+ M      P+   YN ++   C  G+++ A ++   
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           + S  C+  V +Y+ILI        ++ AL L  EMLS+G+KPD+  YNT+  G+ +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 251 VERAFKLFDEMQRHGVAADT---------------W--------------------AYRT 275
           V+RAF++   ++  G   D                W                     Y  
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I  LC++G I EA+ L + ++      D  +Y+ LI   C+ GRL +A E   ++    
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLF 363
            + D+V YN ++  LC +GK D+A ++F
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIF 426



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 139/269 (51%), Gaps = 1/269 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           + H  C + ++ E+  L   M+ +G  P+V+    ++        + +A R++E++ + G
Sbjct: 95  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            +P+ F YN L++GFC   R++ A  +   M S     +  +Y+I+I   C   +++ AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            + +++LS   +P V+ Y  L         V+ A KL DEM   G+  D + Y T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G +  A E+ R L +   E D+ +YN L+  L   G+ +   +L   +       +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VTY+I+I  LC DGK+++A +L   M+ K
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEK 362



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 9/188 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNT 60
           +A  +F KL   GC PN  +YNT+ + L  +G  I AL++  E M+NG         P+ 
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG-------IDPDE 473

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY ++I  LC+EG VD+A EL + M+    +P+VVTYN ++ GFC A+   +A  +   
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G +PN  ++ V++  +   G   EA  L   +++I    + + +  L   F L   
Sbjct: 534 MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA-ISEYSFKRLHRTFPLLNV 592

Query: 181 VNRAEELF 188
           + R+ + F
Sbjct: 593 LQRSSQTF 600



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  + +++   G +P+  TYN++I+ LCR G    A  L  +M   + EF     P+ 
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR--SCEF----HPSV 508

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VTY  ++ G CK   ++ A  +   M      PN  TY  LI G  +A    EA
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 201/433 (46%), Gaps = 65/433 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
            A +LF  LR  G  P+  TY+TL++GL +      AL+L +EM N   +   VC     
Sbjct: 176 RAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALL 235

Query: 57  -------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                                     PN  TY  ++DGLCK G   +A E++ +M   N 
Sbjct: 236 SGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNH 295

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA-- 149
             + VTY  LIHG C + D + A  ++ +M+  G+  +V  +N ++   C+ G+  EA  
Sbjct: 296 QADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK 355

Query: 150 -----------------------------SRLLELMIQI----GVRPNAFVYNTLMDGFC 176
                                        S   EL+ Q+       P+   + TL+ G C
Sbjct: 356 FWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLC 415

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G  NRA E+     + G + +VFSYS +IN +CK+     A  +Y  M+  G KP+  
Sbjct: 416 ENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSH 475

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +YN L  G   + ++  A K++ EM  +G       Y T IDGLCK     EA  L + +
Sbjct: 476 VYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEM 535

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               ++ DIR Y  LI GLC+  ++ +A  ++  +    L  DV+ +NI+IH LC+ GK+
Sbjct: 536 LERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKV 595

Query: 357 DKARDLFLDMEAK 369
           D+A  ++L+M+ K
Sbjct: 596 DEAFCIYLEMKEK 608



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 188/352 (53%), Gaps = 8/352 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AA ++  +   G   +V  YN+LI G C  G T  A   ++      G  G+       
Sbjct: 317 SAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDS----TGFSGIR---QIT 369

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMK-DENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY  +  GL   G V +A EL  +++ D + +P+ VT+ +LIHG C     N A  +  +
Sbjct: 370 TYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILED 429

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             + G + +V S++ ++N  CK+G+  +A+ + + M++ G +PN+ VYN L++GFC   +
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A ++++ M S GC   + +Y+ LI+G CK ++ + A SL  EML +G KPD+  Y +
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL    +V+ A +++DE+   G+  D   +   I GLC  G + EA  ++  ++   
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKN 609

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
              ++  YN L+DG  + G +  A  L+ ++    L  D+VTYN  I  LC+
Sbjct: 610 CSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCS 661



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 195/403 (48%), Gaps = 39/403 (9%)

Query: 3   AAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           A A F  L  + GC P V ++NTL++   R      A   F  +++G   FG    PN  
Sbjct: 102 ALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHG--AFGRRIAPNLQ 159

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I+  LC  G VD+A  LF  ++   + P+ VTY++L+ G    +  + A  L  EM
Sbjct: 160 TYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEM 219

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGR 180
            + GVQ + V +N +++   + G  ++A ++ E +++  G  PN   Y  ++DG C  GR
Sbjct: 220 PNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGR 279

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A E++  M +   + +  +Y ILI+G C++ +++ A  +YS+M+  G+  DV +YN+
Sbjct: 280 FKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNS 339

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV---------------------------------- 266
           L  G  E+ +   A+K +D     G+                                  
Sbjct: 340 LIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDAS 399

Query: 267 -AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
            + D   + T I GLC+NGY   A E+    R    ELD+ +Y+ +I+  CK GR   A 
Sbjct: 400 CSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDAN 459

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           E+++++ +     +   YN +I+  C   K++ A  ++++M +
Sbjct: 460 EVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTS 502



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 185/389 (47%), Gaps = 41/389 (10%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G  PN+ TY  +++GLC+ G    A  ++  M   N +       +TVTY  +I G
Sbjct: 255 VRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQ------ADTVTYGILIHG 308

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA--------------- 114
           LC+ G VD A  ++  M    +  +V  YNSLI GFC      EA               
Sbjct: 309 LCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQI 368

Query: 115 -------KCLFIEMM-------------DQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
                  K L    M             D    P+ V+F  +++ LC+NG  + A  +LE
Sbjct: 369 TTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILE 428

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
                G   + F Y+++++ FC  GR + A E++ +M   GCK N   Y+ LING+C+  
Sbjct: 429 DARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVS 488

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +I  A+ +Y EM S G  P ++ YNTL  GL +  + + A  L  EM   G   D   Y 
Sbjct: 489 KINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYA 548

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           + I GLC++  +  A+ ++  +     ++D+  +N LI GLC +G++  A+ ++  +   
Sbjct: 549 SLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEK 608

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLF 363
               ++VTYN ++      G +DKA  L+
Sbjct: 609 NCSPNLVTYNTLMDGFYEIGSIDKAASLW 637



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 162/310 (52%), Gaps = 6/310 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            C P+  T+ TLI+GLC  G+   A  + E+  N   E  V       +Y+++I+  CK+
Sbjct: 399 SCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVF------SYSSMINRFCKD 452

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A E++  M  +   PN   YN+LI+GFC  +  N+A  ++IEM   G  P ++++
Sbjct: 453 GRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITY 512

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ LCK  K  EAS L + M++ G +P+   Y +L+ G C   +V+ A  ++  +  
Sbjct: 513 NTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILD 572

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + +V  ++ILI+G C   +++ A  +Y EM  K   P++V YNTL  G +EI  +++
Sbjct: 573 AGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDK 632

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L+  +  +G+  D   Y T I GLC      E V L   +        +  ++ L+ 
Sbjct: 633 AASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVR 692

Query: 314 GLCKSGRLKI 323
            + K G ++I
Sbjct: 693 AVIKYGPIQI 702



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 175/339 (51%), Gaps = 5/339 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
            + TYN +  GL  +G    A  L +++ N        C P+ VT+ T+I GLC+ G+ +
Sbjct: 367 QITTYNIMTKGLLDSGMVSEATELLKQLEND-----ASCSPDKVTFGTLIHGLCENGYAN 421

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A E+    ++     +V +Y+S+I+ FC     ++A  ++  M+  G +PN   +N ++
Sbjct: 422 RAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALI 481

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N  C+  K+++A ++   M   G  P    YNTL+DG C   +   A  L   M   G K
Sbjct: 482 NGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFK 541

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ +Y+ LI G C++K+++ AL ++ E+L  G++ DV+++N L  GL    +V+ AF +
Sbjct: 542 PDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           + EM+    + +   Y T +DG  + G I +A  L+  +     + DI  YN  I GLC 
Sbjct: 602 YLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCS 661

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
             R      L   +    ++  V+T++I++ A+   G +
Sbjct: 662 CNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPI 700



 Score = 44.7 bits (104), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 5/86 (5%)

Query: 289 AVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV----LIADVVTY 343
           A+  FR L  +L     +R++N L+D   ++ R   A   F SL  G     +  ++ TY
Sbjct: 102 ALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTY 161

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
           NI++ +LCA G +D+A  LF  +  +
Sbjct: 162 NIILRSLCARGDVDRAVSLFSSLRRR 187


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 191/361 (52%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L   L  FG  PNV  Y TLI+G C+ G+ ++A NLF +M       G+V  PN  TY+ 
Sbjct: 180 LLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKM----NRLGLV--PNPHTYSV 233

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++G  K+G   +  +++  MK   I PN   YN LI  +C     ++A  +F EM ++G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +   V+++N+++  LC+  K  EA +L+  + ++G+ PN   YN L++GFC   +++ A 
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAV 353

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF  ++S G    + +Y+ LI GY K + + GAL L  EM  + I P  V Y  L    
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAF 413

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             ++  E+A ++   M++ G+  D + Y   + GLC +G + EA +LF++L  +  + + 
Sbjct: 414 ARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNS 473

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I G CK G    A  L   + +  ++ +V ++   I  LC D K  +A  L   
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQ 533

Query: 366 M 366
           M
Sbjct: 534 M 534



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 179/349 (51%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           + +++  +I G C  G+ +    L   +     EFG+   PN V YTT+IDG CK+G V 
Sbjct: 157 DAYSFGIMIKGCCEAGYFVKGFRLLAMLE----EFGL--SPNVVIYTTLIDGCCKDGNVM 210

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            AK LF KM    + PN  TY+ L++GF       E   ++  M   G+ PN  ++N ++
Sbjct: 211 LAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLI 270

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +E C +G +D+A ++   M + G+      YN L+ G C   +   A +L   +  +G  
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ILING+C  ++++ A+ L++++ S G+ P +V YNTL  G  ++  +  A  L
Sbjct: 331 PNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+   +A     Y   ID   +  +  +A E+   +       D+  Y+ L+ GLC 
Sbjct: 391 VKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCV 450

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G +K A +LF+SL    L  + V YN MIH  C +G   +A  L  +M
Sbjct: 451 HGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 166/353 (47%), Gaps = 7/353 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A  LF K+   G  PN  TY+ L+NG  + G       ++E M       G+V  PN 
Sbjct: 210 MLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS----GIV--PNA 263

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  +I   C +G VDKA ++F +M+++ I   V+TYN LI G C    + EA  L  +
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G+ PN+V++N+++N  C   KMD A RL   +   G+ P    YNTL+ G+     
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   ME      +  +Y+ILI+ + +    E A  ++S M   G+ PDV  Y+ 
Sbjct: 384 LAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSV 443

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL     ++ A KLF  +    +  ++  Y T I G CK G    A+ L   +    
Sbjct: 444 LLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSG 503

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
              ++ ++   I  LC+  + K A  L   +    L   V  Y  M+H +  D
Sbjct: 504 MVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK-MVHKVKGD 555



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 147/314 (46%), Gaps = 1/314 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C   T  Y T+++        D+A      M  E   P   T+N+L+     +N +++A 
Sbjct: 85  CSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAW 144

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +F E+  + V  +  SF +++   C+ G   +  RLL ++ + G+ PN  +Y TL+DG 
Sbjct: 145 WIFNELKSK-VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGC 203

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G V  A+ LF  M  +G   N  +YS+L+NG+ K         +Y  M   GI P+ 
Sbjct: 204 CKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNA 263

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             YN L         V++AFK+F EM+  G+A     Y   I GLC+     EAV+L   
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +    +I  YN LI+G C   ++  A  LF  L    L   +VTYN +I        
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 356 MDKARDLFLDMEAK 369
           +  A DL  +ME +
Sbjct: 384 LAGALDLVKEMEER 397



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/384 (23%), Positives = 173/384 (45%), Gaps = 42/384 (10%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C      Y+T++N    +  T  AL     M +  G       P + T+  ++  L +  
Sbjct: 85  CSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIH-EGHV-----PLSNTFNNLLCLLIRSN 138

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           + DKA  +F ++K + +  +  ++  +I G C A  + +   L   + + G+ PNVV + 
Sbjct: 139 YFDKAWWIFNELKSKVV-LDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYT 197

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++  CK+G +  A  L   M ++G+ PN   Y+ LM+GF   G      +++ +M+  
Sbjct: 198 TLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRS 257

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI----------------------- 231
           G   N ++Y+ LI+ YC +  ++ A  +++EM  KGI                       
Sbjct: 258 GIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEA 317

Query: 232 ------------KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
                        P++V YN L  G  ++ +++ A +LF++++  G++     Y T I G
Sbjct: 318 VKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAG 377

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
             K   +  A++L + +           Y  LID   +    + A E+   + +  L+ D
Sbjct: 378 YSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPD 437

Query: 340 VVTYNIMIHALCADGKMDKARDLF 363
           V TY++++H LC  G M +A  LF
Sbjct: 438 VYTYSVLLHGLCVHGNMKEASKLF 461



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/342 (22%), Positives = 132/342 (38%), Gaps = 85/342 (24%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL----------ELMIQIG-- 160
           +A  LF     QG+Q    S + I+N L  +G + +A  L+           LM+Q+   
Sbjct: 21  KALLLFNTATYQGLQHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQA 80

Query: 161 -VRP------------NAFVY-----------------------NTLMDGFCLTGRVNRA 184
              P            NA+V+                       NT  +  CL  R N  
Sbjct: 81  HFTPCSTYTPLYDTVVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYF 140

Query: 185 EELFVSMESMGCK--HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           ++ +     +  K   + +S+ I+I G C+         L + +   G+ P+VVIY TL 
Sbjct: 141 DKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLI 200

Query: 243 I-----------------------------------GLFEIHQVERAFKLFDEMQRHGVA 267
                                               G F+       F++++ M+R G+ 
Sbjct: 201 DGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIV 260

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            + +AY   I   C +G + +A ++F  +R       +  YN LI GLC+  +   A +L
Sbjct: 261 PNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKL 320

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              + +  L  ++VTYNI+I+  C   KMD A  LF  +++ 
Sbjct: 321 VHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSS 362


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 196/368 (53%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A      +   G +PNV TYNT+I+G C  G    A  +F+ M +   E      P+  
Sbjct: 234 KAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLE------PDCY 287

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY + I GLCKEG +++A  L  KM +  + PN VTYN+LI G+C   D ++A     EM
Sbjct: 288 TYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM 347

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+  ++V++N+ ++ L   G+M +A  +++ M + G+ P+A  +N L++G+C  G  
Sbjct: 348 ISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDA 407

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA  L   M   G +  + +Y+ LI    K   ++ A +L+S++  +G+ PD++++N L
Sbjct: 408 KRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      ++RAF+L  EM    V  D   Y T + G C+ G + EA +L   ++    
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D  +YN LI G  K G +K A+ +   +        ++TYN +I  LC + + + A +
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEE 587

Query: 362 LFLDMEAK 369
           L  +M +K
Sbjct: 588 LLKEMVSK 595



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 183/357 (51%), Gaps = 6/357 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ ++       +++T+N +IN LC+ G    A      M       GV  KPN VT
Sbjct: 200 AWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMET----LGV--KPNVVT 253

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TII G C  G   +A+ +F  MKD+ + P+  TYNS I G C      EA  L  +M+
Sbjct: 254 YNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKML 313

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN V++N +++  C  G +D+A    + MI  G+  +   YN  +    + GR+ 
Sbjct: 314 EGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMG 373

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ +   M   G   +  +++ILINGYC+  + + A  L  EM+ KGI+P +V Y +L 
Sbjct: 374 DADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLI 433

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L + ++++ A  LF ++Q+ G+  D   +   IDG C NG I  A +L + +  +K  
Sbjct: 434 YVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVL 493

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            D   YN L+ G C+ G+++ A +L   + R  +  D ++YN +I      G M  A
Sbjct: 494 PDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDA 550



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/314 (33%), Positives = 162/314 (51%), Gaps = 6/314 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ L  K+   G  PN  TYN LI+G C  G    A    +EM +     G++   + V
Sbjct: 304 EASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISK----GIMA--SLV 357

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY   I  L  EG +  A  +  +M+++ + P+ VT+N LI+G+C   D   A  L  EM
Sbjct: 358 TYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEM 417

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+QP +V++  ++  L K  +M EA  L   + Q G+ P+  V+N L+DG C  G +
Sbjct: 418 VGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNI 477

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA +L   M++M    +  +Y+ L+ GYC+  ++E A  L  EM  +GIKPD + YNTL
Sbjct: 478 DRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTL 537

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ AF++ DEM   G       Y   I GLCKN     A EL + +     
Sbjct: 538 ISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGI 597

Query: 302 ELDIRAYNCLIDGL 315
             D   Y  +I+ +
Sbjct: 598 TPDDSTYLSIIEAM 611



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 181/392 (46%), Gaps = 43/392 (10%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R+   +P++     LI     T  TI     F+E+A        V    T+ +  ++   
Sbjct: 105 RLPSPKPSINLIQRLILSPTCTNRTI-----FDELALARDR---VDAKTTLIFDLLVRAY 156

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+    ++A E F  +K++   PN+ T N ++  F   N    A  L+ EM    ++ ++
Sbjct: 157 CELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSL 216

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            +FN+++N LCK GK+ +A   +  M  +GV+PN   YNT++ G CL G+  RA  +F +
Sbjct: 217 YTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQT 276

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M+  G + + ++Y+  I+G CK   +E A  L  +ML  G+ P+ V YN L  G      
Sbjct: 277 MKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGD 336

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           +++A+   DEM   G+ A    Y  FI  L   G + +A  + + +R      D   +N 
Sbjct: 337 LDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNI 396

Query: 311 LIDGLCKSG-----------------------------------RLKIAWELFRSLPRGV 335
           LI+G C+ G                                   R+K A  LF  + +  
Sbjct: 397 LINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEG 456

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L+ D++ +N +I   CA+G +D+A  L  +M+
Sbjct: 457 LLPDIIVFNALIDGHCANGNIDRAFQLLKEMD 488



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 138/251 (54%), Gaps = 6/251 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++R  G  P+  T+N LING CR G    A  L +EM  G G      +P  V
Sbjct: 374 DADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV-GKG-----IQPTLV 427

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I  L K   + +A  LF K++ E + P+++ +N+LI G C   + + A  L  EM
Sbjct: 428 TYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEM 487

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  V P+ +++N +M   C+ GK++EA +LL+ M + G++P+   YNTL+ G+   G +
Sbjct: 488 DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDM 547

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M + G    + +Y+ LI G CKN+E E A  L  EM+SKGI PD   Y ++
Sbjct: 548 KDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSI 607

Query: 242 FIGLFEIHQVE 252
              +  +  +E
Sbjct: 608 IEAMETVDDLE 618



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 36/185 (19%)

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +EL ++ + +  K  +  + +L+  YC+ K+   AL  +  +  KG  P++   N +   
Sbjct: 132 DELALARDRVDAKTTLI-FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSL 190

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             ++++ + A+ L+ EM R  + +  + +                               
Sbjct: 191 FLKLNRTQMAWVLYAEMFRMNIRSSLYTF------------------------------- 219

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
               N +I+ LCK G+LK A E    +    +  +VVTYN +IH  C  GK  +AR +F 
Sbjct: 220 ----NIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQ 275

Query: 365 DMEAK 369
            M+ K
Sbjct: 276 TMKDK 280


>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
 gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
          Length = 609

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A +++L   G  P    +N L+  L R G    A N+F+EM +     GV  +   V
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQS----RGV--RRTVV 276

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ T+I G+C+ G +D A+ L  +M +  + P+V TY +LI G C      +A+ +F +M
Sbjct: 277 SFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKM 336

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++PN V F ++++  CK G  +    L   M + GVRP+A  YN +++G C    +
Sbjct: 337 CGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDL 396

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  + V M S G + +  +Y+ LI+GYCK +E++ A+ +   M+++G+  D V Y  L
Sbjct: 397 KSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTAL 456

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +   A ++  EM   G+  D   Y   ID  C+ G +   + L + ++    
Sbjct: 457 ISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGR 516

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  YN +++G CK G++K A  L  ++    +  D +TYNI++   C  GK+    +
Sbjct: 517 KPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEE 576

Query: 362 L 362
           L
Sbjct: 577 L 577



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 143/287 (49%)

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           +L++ D  + P    +N L+       +   A+ +F EM  +GV+  VVSFN +++ +C+
Sbjct: 228 YLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCR 287

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
            G +D A  L   M + GV P+ + Y  L+ G C  GR+  A  +F  M   G K N   
Sbjct: 288 AGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVV 347

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           ++ILI+ +CK  + E  L L+ EM  +G++PD V YN +  GL     ++ A  +  EM+
Sbjct: 348 FTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMR 407

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G+  DT  Y T IDG CK   +  A+E+ + +      LD   Y  LI GL K+GR  
Sbjct: 408 SAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSA 467

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  +   +    L  D  TY ++I A C  G +     L  +M+ K
Sbjct: 468 DAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNK 514


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  204 bits (519), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/354 (32%), Positives = 179/354 (50%), Gaps = 9/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P+V TYN L+   C+      AL L + M A G       C+PN VTY  IID +C+
Sbjct: 193 GCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEG-------CEPNNVTYNVIIDAMCR 245

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG VD+A+EL   +      PN V YN+++ GFC    W +A  +  EM+ +   PN  +
Sbjct: 246 EGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEAT 305

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            NVI+N LC+ G + + +  LE M + G   N   YN ++ G C  G V+ A EL  +M+
Sbjct: 306 LNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQ 365

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S GCK ++ +Y+ ++ G C     E A  L  +M      PD   +NT+     +   + 
Sbjct: 366 SFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLIL 425

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +AF++F +M   G   ++  Y T I GL K G + +A+EL   +    +  D + Y  L 
Sbjct: 426 QAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTD-KMYRVLT 484

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + L K  +++   ++   L    +    V YN ++  LC +GK D A D+  DM
Sbjct: 485 ESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADM 538



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 177/363 (48%), Gaps = 9/363 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +R  GCEPN  TYN +I+ +CR G    A  L   + +        CKPNTV
Sbjct: 216 QALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRG------CKPNTV 269

Query: 62  TYTTIIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            Y T++ G C  E +VD A E+  +M  EN  PN  T N +I+  C      +      +
Sbjct: 270 NYNTVLKGFCSIERWVD-ADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEK 328

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G   NVV++N +++ +C+ G +D A  LL  M   G +P+   YNT++ G C   R
Sbjct: 329 MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 388

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              AEEL + M       +  +++ +I+ +C+   I  A  ++ +M  KG  P+   Y+T
Sbjct: 389 WEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYST 448

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  ++E+A +L +EM   G   D   YR   + L K   I E V++   L+   
Sbjct: 449 IIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSG 507

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
                  YN ++ GLC++G+   A ++   +     + D  TY I+I  L  +G   +AR
Sbjct: 508 ISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEAR 567

Query: 361 DLF 363
           +L 
Sbjct: 568 ELL 570



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 170/369 (46%), Gaps = 16/369 (4%)

Query: 6   LFMKLRVFGCEP---NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP--NT 60
           L   LR+ G  P   +V   N L+  LCR G    A  + E            C P    
Sbjct: 80  LDAALRLVGSSPRPPDVPLANRLVRDLCRRGRPADAARVVE-----------ACGPEATA 128

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  ++DG C+ G ++ A+ +   M       +   +N LIH  C      +A  +   
Sbjct: 129 ATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDG 188

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  P+VV++N+++   CK     +A  L++ M   G  PN   YN ++D  C  G 
Sbjct: 189 MLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGD 248

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V++A EL  S+ S GCK N  +Y+ ++ G+C  +    A  +  EM+ +   P+    N 
Sbjct: 249 VDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNV 308

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L     +++     ++M +HG  A+   Y   I G+C+ G +  A+EL   ++   
Sbjct: 309 IINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFG 368

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + DI  YN ++ GLC + R + A EL   + +   + D  T+N +I   C  G + +A 
Sbjct: 369 CKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAF 428

Query: 361 DLFLDMEAK 369
           ++F  M  K
Sbjct: 429 EVFKQMPEK 437



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 171/358 (47%), Gaps = 10/358 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV-TYTTIIDGLCK 72
           G E    TY  L++G CR G       L E+     G      + ++   +  +I  LC+
Sbjct: 123 GPEATAATYGALVDGYCRAG-------LLEDARRVVGGMPAHVQASSAYAHNPLIHALCE 175

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G V  A  +   M      P+VVTYN L+   C    + +A  L   M  +G +PN V+
Sbjct: 176 RGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVT 235

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +NVI++ +C+ G +D+A  LL  +   G +PN   YNT++ GFC   R   A+E+   M 
Sbjct: 236 YNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMV 295

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQV 251
              C  N  + +++IN  C+ K +   ++LY E +SK G   +VV YN +  G+ E   V
Sbjct: 296 RENCPPNEATLNVIINTLCR-KGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNV 354

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           + A +L   MQ  G   D   Y T + GLC      +A EL   +       D   +N +
Sbjct: 355 DSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTI 414

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           I   C+ G +  A+E+F+ +P      +  TY+ +I  L   GKM++A +L  +M  K
Sbjct: 415 ISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANK 472



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 144/282 (51%), Gaps = 7/282 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PN  T N +IN LCR G  +  + L+ E  + +G     C  N VTY  +I G+C++G
Sbjct: 299 CPPNEATLNVIINTLCRKG-LLQKVTLYLEKMSKHG-----CTANVVTYNAVISGMCEQG 352

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD A EL   M+     P++VTYN+++ G C A+ W +A+ L I+M      P+  +FN
Sbjct: 353 NVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFN 412

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            I++  C+ G + +A  + + M + G  PN+  Y+T++ G    G++ +A EL   M + 
Sbjct: 413 TIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANK 472

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +   Y +L     K  +IE  + +  ++   GI P  V+YNT+ +GL    + + A
Sbjct: 473 GFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYA 531

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             +  +M   G   D   Y   I+GL   GY  EA EL   L
Sbjct: 532 IDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRL 573



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 133/278 (47%), Gaps = 41/278 (14%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++   L++ K+   GC  NV TYN +I+G+C  G+   AL L   M +    FG  CKP+
Sbjct: 319 LQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQS----FG--CKPD 372

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTY T++ GLC     + A+EL +KM   +  P+  T+N++I  +C      +A  +F 
Sbjct: 373 IVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFK 432

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-------------------------- 153
           +M ++G  PN  +++ I+  L K GKM++A  LL                          
Sbjct: 433 QMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDK 492

Query: 154 -ELMIQI-------GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            E ++Q+       G+ P   +YNT++ G C  G+ + A ++   M S GC  +  +Y I
Sbjct: 493 IEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYII 552

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           LI G       + A  L S + S+ +  + +I N   +
Sbjct: 553 LIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKNEALL 590


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 192/366 (52%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +R +G  P+   Y T+I+G C+ G+   A  LF+EM            P+ 
Sbjct: 329 VEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKK------IVPDI 382

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT++I G+CK G + +A+E+F +M  + + P+ VTY +LI G+C A +  EA  +  +
Sbjct: 383 VTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQ 442

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ PNVV++  + + LCKNG++D A+ LL  M + G++PN + YNT+++G C  G 
Sbjct: 443 MVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGN 502

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +  +L   M+  G   +  +Y+ L++ YCK  E+  A  L   ML+K ++P +V +N 
Sbjct: 503 IEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNV 562

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      +E   +L + M   G+  +   + + +   C    +    E+++ +    
Sbjct: 563 LMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRG 622

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   YN LI G CK+  +K AW L + +          TY+ +I       K  +AR
Sbjct: 623 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEAR 682

Query: 361 DLFLDM 366
            LF +M
Sbjct: 683 KLFEEM 688



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L +++   G  P+V +Y  +++G CR G     L L +E+  G G      KP+  
Sbjct: 260 EAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDEL-KGKG-----LKPDEY 313

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  II  LCK G V +A++L   M+   + P+ V Y ++I GFC   + + A  LF EM
Sbjct: 314 IYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM 373

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P++V++  +++ +CK+GKM EA  +   M+  G+ P+   Y  L+DG+C  G +
Sbjct: 374 RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEM 433

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M   G   NV +Y+ L +G CKN EI+ A  L  EM  KG++P+V  YNT+
Sbjct: 434 KEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTI 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +I  +E+  KL +EM   G   DT  Y T +D  CK G + +A EL R +   + 
Sbjct: 494 VNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL 553

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  +N L++G C SG L+    L   +    ++ +  T+N ++   C    M    +
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTE 613

Query: 362 LFLDMEAK 369
           ++  M  +
Sbjct: 614 IYKAMHDR 621



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/360 (30%), Positives = 184/360 (51%), Gaps = 6/360 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++R     P++ TY ++I+G+C++G  + A  +F EM     E      P+ VT
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLE------PDEVT 419

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +IDG CK G + +A  +  +M  + + PNVVTY +L  G C   + + A  L  EM 
Sbjct: 420 YTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMS 479

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+QPNV ++N I+N LCK G +++  +L+E M   G  P+   Y TLMD +C  G + 
Sbjct: 480 RKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMA 539

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A EL   M +   +  + ++++L+NG+C +  +E    L   ML KGI P+   +N+L 
Sbjct: 540 KAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLM 599

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                 + +    +++  M   GV  D+  Y   I G CK   + EA  L + +    Y 
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           +    Y+ LI G  K  +   A +LF  + +  L+A+   Y+I +     +G  +   +L
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLEL 719



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 156/277 (56%), Gaps = 6/277 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++  ++   G  PNV TY  L +GLC+ G   VA  L  EM+          +PN  
Sbjct: 435 EAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG------LQPNVY 488

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TI++GLCK G +++  +L  +M      P+ +TY +L+  +C   +  +A  L   M
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ +QP +V+FNV+MN  C +G +++  RL+E M++ G+ PNA  +N+LM  +C+   +
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               E++ +M   G   +  +Y+ILI G+CK + ++ A  L+ EM+ KG       Y+ L
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             G ++  +   A KLF+EM++HG+ A+   Y  F+D
Sbjct: 669 IRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 197/364 (54%), Gaps = 7/364 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGL-CRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +EA  LF KL  +G   +V + N  ++ L C      +A+ +FEE      E GV    N
Sbjct: 188 LEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFP----ELGVCW--N 241

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TV+   ++  LC+ G V +A  L ++M D    P+VV+Y  ++ G+C   + ++   L  
Sbjct: 242 TVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVD 301

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+  +G++P+   +N I+  LCKNG++ EA +LL  M + GV P+  VY T++ GFC  G
Sbjct: 302 ELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLG 361

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V+ A +LF  M       ++ +Y+ +I+G CK+ ++  A  +++EML KG++PD V Y 
Sbjct: 362 NVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYT 421

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G  +  +++ AF + ++M + G+  +   Y    DGLCKNG I  A EL   +   
Sbjct: 422 ALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRK 481

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + ++  YN +++GLCK G ++   +L   +       D +TY  ++ A C  G+M KA
Sbjct: 482 GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKA 541

Query: 360 RDLF 363
            +L 
Sbjct: 542 HELL 545



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 178/355 (50%), Gaps = 7/355 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           +G  P VF  +     L   G  + A  LF ++      +GVV   ++            
Sbjct: 167 WGSHPLVF--DLYFQVLVENGFVLEAQKLFHKLL----RYGVVVSVDSCNLFLSRLSCNF 220

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG +  A ++F +  +  +  N V+ N ++H  C      EA  L ++M D+G  P+VVS
Sbjct: 221 EG-IKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVS 279

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           + V+++  C+ G++D+  +L++ +   G++P+ ++YN ++   C  G V  AE+L   M 
Sbjct: 280 YGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMR 339

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   +   Y+ +I+G+CK   +  A  L+ EM  K I PD+V Y ++  G+ +  ++ 
Sbjct: 340 KWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMV 399

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F+EM   G+  D   Y   IDG CK G + EA  +   +       ++  Y  L 
Sbjct: 400 EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALA 459

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           DGLCK+G + +A EL   + R  L  +V TYN +++ LC  G +++   L  +M+
Sbjct: 460 DGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD 514



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 159/301 (52%), Gaps = 1/301 (0%)

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF-CYANDWNEAKCLFIEMMDQGVQP 128
           L + GFV +A++LF K+    +  +V + N  +    C       A  +F E  + GV  
Sbjct: 181 LVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCW 240

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N VS N++++ LC+ GK+ EA  LL  M   G  P+   Y  ++ G+C  G +++  +L 
Sbjct: 241 NTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLV 300

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ++  G K + + Y+ +I   CKN E+  A  L   M   G+ PD V+Y T+  G  ++
Sbjct: 301 DELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKL 360

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             V  A KLFDEM+R  +  D   Y + I G+CK+G +VEA E+F  + +   E D   Y
Sbjct: 361 GNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTY 420

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             LIDG CK+G +K A+ +   + +  L  +VVTY  +   LC +G++D A +L  +M  
Sbjct: 421 TALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSR 480

Query: 369 K 369
           K
Sbjct: 481 K 481



 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 124/277 (44%), Gaps = 41/277 (14%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G +PNV+TYNT++NGLC+ G+    + L EEM +  G +     P+T+T
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM-DLAGFY-----PDTIT 524

Query: 63  YTTIIDGLCKEGFVDKAKELFL-----------------------------------KMK 87
           YTT++D  CK G + KA EL                                      M 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
           ++ I PN  T+NSL+  +C  N+      ++  M D+GV P+  ++N+++   CK   M 
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA  L + M++ G    A  Y+ L+ GF    +   A +LF  M   G       Y I +
Sbjct: 645 EAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +   +    E  L L  E +++      V+Y   FIG
Sbjct: 705 DVNYEEGNWEITLELCDEFMTELSGTIFVVYICFFIG 741


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  204 bits (518), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 184/368 (50%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNT 60
           EA     +++  G E ++  Y +LI G C  G       LF+E +  G+        P  
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCA 282

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+I G CK G + +A E+F  M +  + PNV TY  LI G C      EA      
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNL 342

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++  +PN V++N+I+N+LCK+G + +A  ++ELM +   RP+   YN L+ G C  G 
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402

Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           ++ A +L   M  +S     +V SY+ LI+G CK   +  AL +Y  ++ K    D V  
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L     +   V +A +L+ ++    +  ++  Y   IDG CK G +  A  L   +R+
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            + +  +  YNCL+  LCK G L  AW LF  + R     DVV++NIMI      G +  
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 359 ARDLFLDM 366
           A  L + M
Sbjct: 583 AESLLVGM 590



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 192/403 (47%), Gaps = 43/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  ++R     P+VF+YNT+I G C       AL L  EM  G+G     C  + V
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLV 213

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID  CK G +D+A     +MK   +  ++V Y SLI GFC   + +  K LF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G  P  +++N ++   CK G++ EAS + E MI+ GVRPN + Y  L+DG C  G+ 
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +    M     + N  +Y+I+IN  CK+  +  A+ +   M  +  +PD + YN L
Sbjct: 334 KEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKN---------------- 283
             GL     ++ A KL   M +       D  +Y   I GLCK                 
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453

Query: 284 -------------------GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
                              G + +A+EL++ +   K   +   Y  +IDG CK+G L +A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L   +    L   V  YN ++ +LC +G +D+A  LF +M+
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 163/307 (53%), Gaps = 2/307 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   +  ++ GLC+     KA  L  +M+  ++ P+V +YN++I GFC   +  +A  L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G   ++V++ ++++  CK GKMDEA   L+ M  +G+  +  VY +L+ GFC  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++R + LF  +   G      +Y+ LI G+CK  +++ A  ++  M+ +G++P+V  Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L  GL  + + + A +  + M       +   Y   I+ LCK+G + +AVE+   ++ 
Sbjct: 321 TGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKM 356
            +   D   YN L+ GLC  G L  A +L   + +       DV++YN +IH LC + ++
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440

Query: 357 DKARDLF 363
            +A D++
Sbjct: 441 HQALDIY 447



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 9/351 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EPN  TYN +IN LC+ G    A+ + E M           +P+ +TY  ++ GLC +G 
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR------TRPDNITYNILLGGLCAKGD 402

Query: 76  VDKA-KELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           +D+A K L+L +KD +  +P+V++YN+LIHG C  N  ++A  ++  ++++    + V+ 
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N   K G +++A  L + +    +  N+  Y  ++DGFC TG +N A+ L   M  
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              + +VF Y+ L++  CK   ++ A  L+ EM      PDVV +N +  G  +   ++ 
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L   M R G++ D + Y   I+   K GY+ EA+  F  +    +E D    + ++ 
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642

Query: 314 GLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
                G      EL + L  + +++   +T  +M +   +   MD A+ L 
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 141/276 (51%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A   + KM + +   N V+ + L+  +        A  +   M+ +G   NV + N+++ 
Sbjct: 91  AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LC+N +  +A  LL  M +  + P+ F YNT++ GFC    + +A EL   M+  GC  
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++ ++ ILI+ +CK  +++ A+    EM   G++ D+V+Y +L  G  +  +++R   LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DE+   G +     Y T I G CK G + EA E+F  +       ++  Y  LIDGLC  
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           G+ K A +    +       + VTYNI+I+ LC DG
Sbjct: 331 GKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDG 366



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 145/283 (51%), Gaps = 8/283 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V +YN LI+GLC+      AL++++ +    G        + VT   +++   K G 
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG------AGDRVTTNILLNSTLKAGD 474

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V+KA EL+ ++ D  I  N  TY ++I GFC     N AK L  +M    +QP+V  +N 
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCK G +D+A RL E M +    P+   +N ++DG    G +  AE L V M   G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              ++F+YS LIN + K   ++ A+S + +M+  G +PD  I +++        + ++  
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +L  ++    +  D     T +D +C +   ++  +  R LR+
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAK--RLLRV 695



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 17/286 (5%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKC------------LFIEMMDQGVQPNVVSFNVIMN 138
           +NP V  Y+ L++ F        + C            +F + +D G        N +M 
Sbjct: 24  LNPRV--YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAFAGSN-LMA 80

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
           +L ++   + A      M++     N    + L++ +    +   A  +   M   G   
Sbjct: 81  KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           NV++++IL+ G C+N E   A+SL  EM    + PDV  YNT+  G  E  ++E+A +L 
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           +EM+  G +     +   ID  CK G + EA+   + ++ +  E D+  Y  LI G C  
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260

Query: 319 GRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G L     LF   L RG      +TYN +I   C  G++ +A ++F
Sbjct: 261 GELDRGKALFDEVLERGDSPC-AITYNTLIRGFCKLGQLKEASEIF 305



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 79/168 (47%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
            F+ S L+    +++  E A S Y +ML      + V  + L     ++ +   AF +  
Sbjct: 72  AFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M + G A + + +   + GLC+N    +AV L R +R      D+ +YN +I G C+  
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            L+ A EL   +        +VT+ I+I A C  GKMD+A     +M+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 7/155 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF +++     P+V ++N +I+G  + G    A +L   M+           P+  
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG------LSPDLF 600

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+   K G++D+A   F KM D    P+    +S++       + ++   L  ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660

Query: 122 MDQGVQPNVVSFNVIMNELC-KNGKMDEASRLLEL 155
           +D+ +  +      +M+ +C  +  MD A RLL +
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 188/363 (51%), Gaps = 10/363 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G  P+V  YN ++ G C  G    AL  F       G+ G  CKPN  TY T+I+G
Sbjct: 105 MRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKF-------GKMGKTCKPNVATYNTVING 157

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK G +D A  LF ++  + ++P+  TY++L+HG C A     A  ++  M++     +
Sbjct: 158 LCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGD 217

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-LTGRVNRAEELF 188
             ++N + +  CK  ++DEA  +L+ MIQ G +P+   YN +++G C    R+  A  LF
Sbjct: 218 AGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLF 277

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M    C  N  +Y  +I G  K  E++  L L+  M   G+ PD   Y++L     ++
Sbjct: 278 QQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKV 337

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC--KNGYIVEAVELFRTLRILKYELDIR 306
            +++ A  +  +  R+ V  D + Y T I G C  +   + EA+ LF+ ++  +   ++ 
Sbjct: 338 RKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVI 397

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            YN ++ GLCK+GR   A+++F+ + +     + +T+ +M   +   GK DK   +F+DM
Sbjct: 398 TYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDM 457

Query: 367 EAK 369
             K
Sbjct: 458 VYK 460



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 185/391 (47%), Gaps = 45/391 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +V+ Y  L++ L R   T  A+  F+       E    C+P+  ++T II   C  
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKR------ELCAHCRPSLYSFTIIIQCFCNV 92

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               +A      M+   I P+V  YN ++ G+C       A   F + M +  +PNV ++
Sbjct: 93  RNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGK-MGKTCKPNVATY 151

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM--------------------- 172
           N ++N LCK GK+D A  L   +    V P+ F Y+TL+                     
Sbjct: 152 NTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLE 211

Query: 173 --------------DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK-EIE 217
                         DGFC   RV+ A E+  +M   GCK +V +Y+ +ING C+ K  IE
Sbjct: 212 ANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIE 271

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L+ +M+     P+ V Y T+ +GL +I++V+R  +LF  M + G++ D +AY + I
Sbjct: 272 EAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLI 331

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI--AWELFRSLPRGV 335
               K   + EA  + +         D+  Y  LI G C++ + ++  A  LF+++    
Sbjct: 332 YAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRR 391

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  +V+TYNI++  LC  G+ D+A  +F +M
Sbjct: 392 VWPNVITYNIVLRGLCKTGRFDEAYQIFQEM 422



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 138/282 (48%), Gaps = 2/282 (0%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           K E    +V  Y  L+H    A    EA   F   +    +P++ SF +I+   C     
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
             A R L  M  +G+ P+   YN ++ G+C  GRV RA   F  M    CK NV +Y+ +
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTV 154

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING CK  +I+ A+ L++ +    + PD   Y+TL  GL +  ++E A K++D M     
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK-SGRLKIAW 325
             D  AY    DG CK   + EA+E+ +T+     +  +  YNC+I+G+C+   R++ A+
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAY 274

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            LF+ +       + VTY  MI  L    ++ +  +LF  M 
Sbjct: 275 RLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMS 316



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 151/290 (52%), Gaps = 19/290 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM--ANGNGEFGVVCKPNT 60
           A  LF +L     +P+ FTY+TL++GLC+      A+ +++ M  AN +G+ G       
Sbjct: 167 AVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG------- 219

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC-YANDWNEAKCLFI 119
             Y  + DG CKE  VD+A E+   M      P+VVTYN +I+G C Y N   EA  LF 
Sbjct: 220 -AYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQ 278

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL---MIQIGVRPNAFVYNTLMDGFC 176
           +M+     PN V++  ++  L    K+ E  R LEL   M + G+ P+ + Y++L+  F 
Sbjct: 279 QMVGSDCPPNAVTYGTMILGL---SKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFV 335

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE--IEGALSLYSEMLSKGIKPD 234
              +++ A+ +           +V+ Y+ LI+GYC+ ++  ++ AL L+  M  + + P+
Sbjct: 336 KVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPN 395

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           V+ YN +  GL +  + + A+++F EM +   + +   ++    G+   G
Sbjct: 396 VITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCG 445



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 9/220 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIV-ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC+P+V TYN +ING+C+  + I  A  LF++M       G  C PN VTY T+I GL K
Sbjct: 248 GCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMV------GSDCPPNAVTYGTMILGLSK 301

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              V +  ELF  M    ++P+   Y+SLI+ F      +EAK +  +     V P+V  
Sbjct: 302 IYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYM 361

Query: 133 FNVIMNELCKNGK--MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           +  +++  C+  K  +DEA  L + M    V PN   YN ++ G C TGR + A ++F  
Sbjct: 362 YTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQE 421

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           M  + C  N  ++ ++  G     + +    ++ +M+ KG
Sbjct: 422 MFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYKG 461



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           S +  G +H+V+ Y+ L++   + +    A+  +   L    +P +  +  +      + 
Sbjct: 34  SSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVR 93

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
              RA++    M+  G+  D  AY   + G C  G +  A+  F  +     + ++  YN
Sbjct: 94  NPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCKPNVATYN 152

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +I+GLCK G++  A  LF  LP  ++  D  TY+ ++H LC   +++ A
Sbjct: 153 TVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAA 202


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/368 (33%), Positives = 200/368 (54%), Gaps = 13/368 (3%)

Query: 4   AALFMKLRVFGCE--PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           AALF+ LRV   E  P   +Y TL+  LC    T  A+ L  +M A+G        +P+ 
Sbjct: 97  AALFL-LRVMAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASG-------VRPDV 148

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I GLC    VDKA EL  +M +  I PNVV Y+ L+ G+C A  W     +F E
Sbjct: 149 VTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEE 208

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++P+VV +  +++ LC+ GK+ +A+++++ M++ G+ PN   YN L++  C  G 
Sbjct: 209 MSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGS 268

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML--SKGIKPDVVIY 238
           V  A  L  +M   G   +  +Y+ LI G     E++ A+ L  EM+     ++P+VV +
Sbjct: 269 VKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTF 328

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++  GL +  ++ +AF++ D M  +G A +   +   I GL +   + +A+EL   +  
Sbjct: 329 NSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMAS 388

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              E D   Y+ LI+G CK  ++  A  L   + R  +  ++V Y  ++ ALC  G M++
Sbjct: 389 SGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQ 448

Query: 359 ARDLFLDM 366
           AR+ F +M
Sbjct: 449 ARNFFDEM 456



 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 197/399 (49%), Gaps = 32/399 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  L   ++  G  P+V TY TLI GLC       A+ L  EM     E  VV      
Sbjct: 131 QAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLL 190

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                    P+ V YT +ID LC+EG V KA ++  KM +  + 
Sbjct: 191 QGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLE 250

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTYN LI+  C      EA  L   M+++GV  + V++N ++  L    +MDEA  L
Sbjct: 251 PNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGL 310

Query: 153 LELMI--QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           LE MI  +  V PN   +N+++ G C TGR+ +A ++   M   GC  N+ ++++LI G 
Sbjct: 311 LEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGL 370

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  +++ A+ L  EM S G++PD   Y+ L  G  ++ QV+RA  L  +M+R G+  + 
Sbjct: 371 LRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPEL 430

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   +  LC+ G + +A   F  +     +LD+ AY+ +I G C+    K A E  + 
Sbjct: 431 VHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKH 489

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    LI D VTY+++I+     G +  A  +   M A 
Sbjct: 490 MLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTAS 528



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/353 (33%), Positives = 188/353 (53%), Gaps = 12/353 (3%)

Query: 18  NVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           +  +YNT++  LCR G  +  AL L   MA+         +P  V+YTT++  LC E   
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHET-------RPTAVSYTTLMRALCAERRT 129

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  L   M+   + P+VVTY +LI G C A D ++A  L  EM + G++PNVV ++ +
Sbjct: 130 GQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCL 189

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   CK G+ +  S++ E M   G+ P+  +Y  L+D  C  G+V +A ++   M   G 
Sbjct: 190 LQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGL 249

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV +Y++LIN  CK   ++ A+SL + ML KG+  D V YNTL  GL  + +++ A  
Sbjct: 250 EPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMG 309

Query: 257 LFDEMQRHG---VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           L +EM  HG   V  +   + + I GLCK G + +A ++   +       ++  +N LI 
Sbjct: 310 LLEEMI-HGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIG 368

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GL +  ++K A EL   +    L  D  TY+I+I+  C   ++D+A  L   M
Sbjct: 369 GLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKM 421



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/405 (32%), Positives = 196/405 (48%), Gaps = 44/405 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G EPNV  Y+ L+ G C+ G       +FEEM+ G G      +P+ V
Sbjct: 166 KAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMS-GRG-----IEPDVV 219

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +ID LC+EG V KA ++  KM +  + PNVVTYN LI+  C      EA  L   M
Sbjct: 220 MYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNM 279

Query: 122 MDQGV-------------------------------------QPNVVSFNVIMNELCKNG 144
           +++GV                                     +PNVV+FN +++ LCK G
Sbjct: 280 LEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTG 339

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           +M +A ++ ++M + G   N   +N L+ G     +V +A EL   M S G + + F+YS
Sbjct: 340 RMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYS 399

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILING+CK  +++ A SL S+M   GI+P++V Y  L   L E   +E+A   FDEM ++
Sbjct: 400 ILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN 459

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
               D  AY T I G C+      A E  + +       D   Y+ LI+    SG L  A
Sbjct: 460 -CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAA 518

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + + +     + DV  ++ +I    A G  +K  +L  +M AK
Sbjct: 519 ERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAK 563



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 133/268 (49%), Gaps = 7/268 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EPNV T+N++I+GLC+TG    A  + + MA  NG     C  N VT+  +I GL +   
Sbjct: 322 EPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAE-NG-----CACNLVTFNLLIGGLLRVHK 375

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V KA EL  +M    + P+  TY+ LI+GFC     + A+ L  +M   G++P +V +  
Sbjct: 376 VKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIP 435

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC+ G M++A    + M +   + +   Y+T++ G C       AEE    M   G
Sbjct: 436 LLAALCEQGMMEQARNFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEG 494

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +  +YS+LIN +  + ++  A  +  +M + G  PDV ++++L  G       E+  
Sbjct: 495 LIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVL 554

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKN 283
           +L  EM    +A D+    T    L  N
Sbjct: 555 ELIREMTAKDIALDSKIISTIYTCLVAN 582



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/233 (27%), Positives = 113/233 (48%), Gaps = 3/233 (1%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N L +   + E+  LL  +  +    +A  YNT++   C  G    A    + + +   
Sbjct: 53  LNRLLRLVPLPESPALLSSLPSVR---DAVSYNTVLAALCRQGGCLDAALFLLRVMAHET 109

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           +    SY+ L+   C  +    A+ L  +M + G++PDVV Y TL  GL +   V++A +
Sbjct: 110 RPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVE 169

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  EM   G+  +   Y   + G CK G      ++F  +     E D+  Y  LID LC
Sbjct: 170 LLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLC 229

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + G++K A ++   +    L  +VVTYN++I+++C +G + +A  L  +M  K
Sbjct: 230 REGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEK 282



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  K+R  G EP +  Y  L+  LC  G    A N F+EM          CK + V 
Sbjct: 414 AESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKN-------CKLDVVA 466

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T+I G C+      A+E    M DE + P+ VTY+ LI+ F  + D   A+ +  +M 
Sbjct: 467 YSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMT 526

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
             G  P+V  F+ ++      G  ++   L+  M    +  ++ + +T+
Sbjct: 527 ASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A  F       C+ +V  Y+T+I+G CR      A    + M +     G++  P++
Sbjct: 446 MEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDE----GLI--PDS 499

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +I+     G +  A+ +  +M      P+V  ++SLI G+    D  +   L  E
Sbjct: 500 VTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIRE 559

Query: 121 MMDQGV 126
           M  + +
Sbjct: 560 MTAKDI 565


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 195/361 (54%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A +   K+   G EP++ T ++L+NG C +     A+ +  +M     + G+  K + V
Sbjct: 141 SALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME----KMGI--KRDVV 194

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T +ID LCK   V  A E+  +MKD  I+PNVVTY+SLI G C +    +A+    EM
Sbjct: 195 VDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 254

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNV++F+ +++   K GK+ +   + ++MIQ+ + PN F Y++L+ G C+  RV
Sbjct: 255 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 314

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M S GC  NV +YS L NG+ K+  ++  + L  +M  +G+  + V  NTL
Sbjct: 315 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+  +++ A  +F  M  +G+  +  +Y   + GL  NG + +A+  F  ++  + 
Sbjct: 375 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 434

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LDI  Y  +I G+CK+  +K A++LF  L    +  D   Y IMI  L   G   +A  
Sbjct: 435 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 494

Query: 362 L 362
           L
Sbjct: 495 L 495



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 188/354 (53%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+++T N L+N  CR      AL+   +M     + G+  +P+ VT +++++G C    
Sbjct: 120 SPDLYTCNILVNCFCRCFQPSSALSYLGKMM----KLGI--EPDIVTASSLVNGFCLSNS 173

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A  +  +M+   I  +VV    LI   C       A  +   M D+G+ PNVV+++ 
Sbjct: 174 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 233

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LCK+G++ +A R L  M    + PN   ++ L+D +   G++++ + ++  M  M 
Sbjct: 234 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 293

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NVF+YS LI G C +  ++ A+ +   M+SKG  P+VV Y+TL  G F+  +V+   
Sbjct: 294 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 353

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           KL D+M + GVAA+T +  T I G  + G I  A+ +F  +       +IR+YN ++ GL
Sbjct: 354 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 413

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +G ++ A   F  + +     D++TY IMIH +C    + +A DLF  ++ K
Sbjct: 414 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK 467



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 153/294 (52%), Gaps = 6/294 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  +  +++  G  PNV TY++LI GLC++G    A     EM +          PN 
Sbjct: 210 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK------INPNV 263

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T++ +ID   K G + K   ++  M   +I+PNV TY+SLI+G C  N  +EA  +   
Sbjct: 264 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 323

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PNVV+++ + N   K+ ++D+  +LL+ M Q GV  N    NTL+ G+   G+
Sbjct: 324 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 383

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +F  M S G   N+ SY+I++ G   N E+E ALS +  M       D++ Y  
Sbjct: 384 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 443

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +  G+ +   V+ A+ LF +++   V  D  AY   I  L + G   EA  L R
Sbjct: 444 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 497



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/315 (24%), Positives = 153/315 (48%), Gaps = 5/315 (1%)

Query: 59  NTVTYTTII-DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            T+ Y  ++  GL    F D A  LF+ M      P++V +N ++        ++    L
Sbjct: 49  TTIDYREVLRSGLHNIKF-DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINL 107

Query: 118 FIEMMD-QGVQ--PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           +  + + +G++  P++ + N+++N  C+  +   A   L  M+++G+ P+    ++L++G
Sbjct: 108 WKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNG 167

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           FCL+  +  A  +   ME MG K +V   +ILI+  CKN+ +  AL +   M  +GI P+
Sbjct: 168 FCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPN 227

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y++L  GL +  ++  A +   EM    +  +   +   ID   K G + +   +++
Sbjct: 228 VVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYK 287

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  + ++  Y+ LI GLC   R+  A ++   +       +VVTY+ + +      
Sbjct: 288 MMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSS 347

Query: 355 KMDKARDLFLDMEAK 369
           ++D    L  DM  +
Sbjct: 348 RVDDGIKLLDDMPQR 362


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/371 (35%), Positives = 189/371 (50%), Gaps = 9/371 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF ++   G  P+V T+  +I+GLC++G+   A   FEEM  G       CKPN V
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGG------CKPNVV 401

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTTII GL K G V  A  +   M      P+ VTY  L+ GFC     +EA  L  E+
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEA-SRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                 PN+  ++ ++  LC  G ++     L E         +  +  +++ G C TGR
Sbjct: 462 DKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGR 521

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE--IEGALSLYSEMLSKGIKPDVVIY 238
           ++ A  +F  M S GCK +  +Y+ILING C+++E  +E A +L  ++   G  PD V Y
Sbjct: 522 LDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTY 581

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L IGL +I +V+RA K+ +E    G  AD  AY     GLC  G +  AV LF+ +  
Sbjct: 582 TPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVR 641

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D  AY C+I+GL K  +L+ A + F  +        V TY  ++ ALC  G +D+
Sbjct: 642 QGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDE 701

Query: 359 ARDLFLDMEAK 369
           A   F  M A+
Sbjct: 702 AFHRFEGMLAR 712



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 192/441 (43%), Gaps = 79/441 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++   G  P+   YNT+I+GL + GH   AL + + M          C P  V
Sbjct: 243 EAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM------LAKACVPTEV 296

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++ LCK G +++A+ELF  M      PN V Y SLIHGF  +    EA  LF EM
Sbjct: 297 TYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEM 356

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT----------- 170
           ++ G +P+V++  V+++ LCK+G  ++A++  E M++ G +PN   Y T           
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416

Query: 171 ------------------------LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                   L+DGFC  GR++ A +L   ++      N+  YS L
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476

Query: 207 INGYCKNKEIEGALS------------------------------------LYSEMLSKG 230
           + G C    +E  L                                     ++  M+S+G
Sbjct: 477 VKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536

Query: 231 IKPDVVIYNTLFIGLFEIHQ--VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            KPD   YN L  GL    +  VERAF L  +++  G   D   Y     GLCK G +  
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDR 596

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           AV++        +  D+ AY  L  GLC  G++  A  LF+ + R     D   Y  +I+
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656

Query: 349 ALCADGKMDKARDLFLDMEAK 369
            L    K++ A   F +M  K
Sbjct: 657 GLIKGKKLEDACKFFDEMIGK 677



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 196/404 (48%), Gaps = 43/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  ++   C+P++ T+  L++ LC+ G    A  +F EM       G V  P+  
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMM----AMGFV-PPDRA 226

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +T ++  L K   V +A+E+F +M+     P+ + YN++I G   A    EA  +   M
Sbjct: 227 LHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNM 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P  V++ +++N LCK G ++ A  L  +M   G RPN+ +Y +L+ GF  +GR+
Sbjct: 287 LAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRM 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G + +V +++++I+G CK+   E A   + EM+  G KP+VV Y T+
Sbjct: 347 KEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTI 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +I +V  AF++   M  HG   D+  Y   +DG CK G + EA +L   L     
Sbjct: 407 IQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSS 466

Query: 302 ELDIRAYNCLID------------------------------------GLCKSGRLKIAW 325
             +++ Y+ L+                                     GLCK+GRL  A 
Sbjct: 467 SPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEAC 526

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALC--ADGKMDKARDLFLDME 367
            +F+ +       D  TYNI+I+ LC   + ++++A  L  D+E
Sbjct: 527 RIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 194/408 (47%), Gaps = 49/408 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +AA  F ++   GC+PNV TY T+I GL + G    A  + + M A+G       C P++
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG-------CFPDS 435

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND---------- 110
           VTY  ++DG CK G +D+A +L  ++   + +PN+  Y+SL+ G C              
Sbjct: 436 VTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFE 495

Query: 111 --------------------------WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN- 143
                                      +EA  +F  M+ +G +P+  ++N+++N LC++ 
Sbjct: 496 QSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSR 555

Query: 144 -GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
             +++ A  LL  +  +G  P+A  Y  L  G C  G V+RA ++     S G   +V +
Sbjct: 556 ENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVA 615

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ L  G C   +++ A+SL+ EM+ +G  PD   Y  +  GL +  ++E A K FDEM 
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMI 675

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKSGR 320
             G       Y   +  LC  G + EA   F  + + + EL   +  Y+ LI G CK+ +
Sbjct: 676 GKGQKPTVATYTALVQALCHAGNVDEAFHRFEGM-LARGELVGSVMIYDALIHGFCKALK 734

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +  A +LF  +     +   VT   +   L   GK +KA++L  +M A
Sbjct: 735 VDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAA 782



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 145/285 (50%), Gaps = 9/285 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIV--ALNLFEEMANGNGEFGVVCKPN 59
           EA  +F ++   GC+P+  TYN LINGLCR+    V  A  L  ++        V   P+
Sbjct: 524 EACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEM------VGYLPD 577

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTYT +  GLCK G VD+A ++  +      N +VV Y +L  G CY    + A  LF 
Sbjct: 578 AVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQ 637

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ QG  P+  ++  I+N L K  K+++A +  + MI  G +P    Y  L+   C  G
Sbjct: 638 EMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAG 697

Query: 180 RVNRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            V+ A   F  M + G    +V  Y  LI+G+CK  +++ AL L+ +M+S+G  P  V  
Sbjct: 698 NVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTS 757

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +LF GL    + E+A +L  EM   G       +   +DGL K+
Sbjct: 758 ASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKS 802



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 168/355 (47%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +VFTYN L+N L    +      + EEM       G+   PNT ++  +I    + 
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKA----GIA--PNTFSFNILIRSFART 167

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVS 132
              D A   F  MK +   P++ T+  L+   C A    +A  +F EMM  G V P+   
Sbjct: 168 RRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRAL 227

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
              ++  L K  ++ EA  +   M + G  P+A  YNT++DG    G    A ++  +M 
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNML 287

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           +  C     +Y IL+N  CK   +E A  L+  M + G +P+ VIY +L  G  +  +++
Sbjct: 288 AKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMK 347

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  LFDEM   G   D   +   IDGLCK+G   +A + F  +     + ++  Y  +I
Sbjct: 348 EACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTII 407

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            GL K GR+  A+ + + +       D VTY  ++   C  G++D+A  L  +++
Sbjct: 408 QGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELD 462



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 7/213 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +V  Y  L  GLC  G    A++LF+EM    G       P+   Y  II+GL K 
Sbjct: 608 GWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG------APDAAAYCCIINGLIKG 661

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVS 132
             ++ A + F +M  +   P V TY +L+   C+A + +EA   F  M+ +G +  +V+ 
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMI 721

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ +++  CK  K+D A +L E MI  G  P A    +L DG   +G+  +A+EL   M 
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           + G   +  +++ +++G  K+ E    L L  E
Sbjct: 782 AGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/212 (28%), Positives = 104/212 (49%), Gaps = 1/212 (0%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           Q G + + F YN LM+        ++   +   M   G   N FS++ILI  + + +  +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG-VAADTWAYRTF 276
            A++ +  M  K  KPD+  +  L   L +    E+AF++F EM   G V  D   +   
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +  L K   + EA E+F  +    +  D  AYN +IDGL K+G  + A ++  ++     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +   VTY I++++LC  G +++A +LF  M A
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAA 323


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/365 (33%), Positives = 192/365 (52%), Gaps = 9/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F+ ++  GC+PNV+TY +LI+G      + +A+ LF  M+      GVV  PNTV
Sbjct: 351 DAWKIFIDMKKKGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRD----GVV--PNTV 401

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++ L +   +D A  +F  M      PN  +YN LI G+C   D  +A  +   M
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     P +V++N+I+   C +G  D A R+LELM   G +P+ + Y  L+ GFC   ++
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M   G   N  +Y+ LI+GYCK+++++ A  +   M   G +P+V  YN L
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + +    A +L   M    ++ D   Y T I+GLC NG I  A+E+F  +     
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y+ LI  L + GR++ A E+F  L +  LI D VTY  MI      GK+D+A D
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701

Query: 362 LFLDM 366
              +M
Sbjct: 702 FLGEM 706



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 204/402 (50%), Gaps = 44/402 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   GCEPN  TY+TLINGLC +G    AL+   EM       GV+  P   T
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMT----RHGVL--PTVHT 335

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +T  I  LC  G ++ A ++F+ MK +   PNV TY SLI G   +     A  LF  M 
Sbjct: 336 FTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMS 392

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV PN V++N +MN L +N ++D A  +  +M + G  PN   YN L+ G+C  G   
Sbjct: 393 RDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTE 452

Query: 183 RAEELFVS-----------------------------------MESMGCKHNVFSYSILI 207
           +A  +  +                                   M++ GC+ + +SY+ LI
Sbjct: 453 KAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELI 512

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +G+CK  ++E A  +++EM+ +G+ P+ V Y  L  G  +  +++ A ++ + M+R G  
Sbjct: 513 SGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCR 572

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +   Y   I GL K      A EL + +   K   D+  Y+ +I+GLC +G + +A E+
Sbjct: 573 PNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEM 632

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F  + +   + ++ TY+ +I AL  +G++++A ++F +++ +
Sbjct: 633 FNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQ 674



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 175/353 (49%), Gaps = 9/353 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +  +FTY TL+  L +   T   ++ + ++           +PN + Y ++I+ LCK+
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG------LQPNLLIYNSVINALCKD 241

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +  K+    + P+  TY S+I G+C   D + A  +F  M ++G +PN  ++
Sbjct: 242 GNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATY 301

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++N LC +G+++EA   +  M + GV P    +   +   C  GR+  A ++F+ M+ 
Sbjct: 302 STLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKK 361

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GCK NV++Y+ LI+G    +    A+ L+  M   G+ P+ V YN L   L E  +++ 
Sbjct: 362 KGCKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDS 418

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +F+ M +HG   +T +Y   I G C  G   +A+ +   +   +    +  YN +I 
Sbjct: 419 ALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIK 478

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C SG   +A  +   +       D  +Y  +I   C   KM+ A  +F +M
Sbjct: 479 GYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEM 531



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 170/348 (48%), Gaps = 6/348 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G  PN  TYN L+N L        AL +F  M    G+ G  C PNT +
Sbjct: 384 AIGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMM----GKHG--CLPNTSS 437

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I G C  G  +KA  +   M      P +VTYN +I G+C + D + A  +   M 
Sbjct: 438 YNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMK 497

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G QP+  S+  +++  CK  KM+ AS +   M+  G+ PN   Y  L+ G+C   +++
Sbjct: 498 ANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLD 557

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   M+  GC+ NV +Y++LI+G  K     GA  L   ML + I PDVV Y+T+ 
Sbjct: 558 CAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVI 617

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL     +  A ++F++M +HG   +   Y + I  L + G + EA E+F  L+     
Sbjct: 618 NGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLI 677

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            D   Y  +I+    SG++  A++    +        + TY+++I  L
Sbjct: 678 PDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 112/373 (30%), Positives = 173/373 (46%), Gaps = 30/373 (8%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P + TYN +I G C +G T VA+ + E M ANG       C+P+  +YT +I G CK   
Sbjct: 468 PTLVTYNIIIKGYCDSGDTDVAIRVLELMKANG-------CQPDEWSYTELISGFCKISK 520

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A  +F +M D  + PN VTY +LI G+C     + A  +   M   G +PNV ++NV
Sbjct: 521 MELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L K      A  L ++M++  + P+   Y+T+++G C  G +  A E+F  M   G
Sbjct: 581 LIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHG 640

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  N+ +YS LI    +   +E A  ++SE+  +G+ PD V Y  +        +V+RAF
Sbjct: 641 CLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAF 700

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGL-----------CKNGYIVEAVE-----------LF 293
               EM   G       Y   I GL             N       +           L 
Sbjct: 701 DFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLS 760

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             L  L +EL  + Y+ L+  L +SGR   A  L+RS+       +  TY   + +L   
Sbjct: 761 SKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRA 820

Query: 354 GKMDKARDLFLDM 366
            K+D A D+F  M
Sbjct: 821 LKVDLAMDVFKHM 833



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 131/250 (52%), Gaps = 10/250 (4%)

Query: 118 FIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMD 173
           +++M  Q G +  + ++  ++ +L    K++  S +++   QI   G++PN  +YN++++
Sbjct: 180 YLDMFSQRGPKMGLFTYTTLLIQL---NKLNMTSTVMDRYHQILREGLQPNLLIYNSVIN 236

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C  G V  AE +   +   G K + F+Y+ +I GYC+N++++ A  +++ M  +G +P
Sbjct: 237 ALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEP 296

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +   Y+TL  GL    +V  A     EM RHGV      +   I  LC  G I +A ++F
Sbjct: 297 NAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIF 356

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             ++    + ++  Y  LI G   S   ++A  LF  + R  ++ + VTYN +++ L  +
Sbjct: 357 IDMKKKGCKPNVYTYTSLISGQRVS---RMAIGLFHRMSRDGVVPNTVTYNALMNVLMEN 413

Query: 354 GKMDKARDLF 363
            ++D A  +F
Sbjct: 414 MEIDSALIVF 423



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 143/341 (41%), Gaps = 65/341 (19%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA +  +++  GC PNV TYN LI+GL +  +   A  L + M            P+ VT
Sbjct: 559 AARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEK------ISPDVVT 612

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T+I+GLC  G +  A E+F KM      PN+ TY+SLI          EA+ +F E+ 
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELK 672

Query: 123 DQGVQPNVVSFNVIMNELC-KNGKMDEASRLLELMIQIGVR------------------- 162
            QG+ P+ V++ V M E+C  +GK+D A   L  MI  G +                   
Sbjct: 673 KQGLIPDEVTY-VKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVY 731

Query: 163 ------PNAF--------------------------------VYNTLMDGFCLTGRVNRA 184
                 PNA                                 +Y+ L+     +GR   A
Sbjct: 732 HKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEA 791

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L+ SM S     N  +Y   +    +  +++ A+ ++  M  +  +  +  Y  L   
Sbjct: 792 NNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICT 851

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           L ++H+ + A  +F++M    + AD   +   I+GL   GY
Sbjct: 852 LCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGY 892



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/175 (29%), Positives = 94/175 (53%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G K  +F+Y+ L+    K       +  Y ++L +G++P+++IYN++   L +   V  A
Sbjct: 188 GPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPNLLIYNSVINALCKDGNVRDA 247

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             + +++ + G+  DT+ Y + I G C+N  +  A E+F  +     E +   Y+ LI+G
Sbjct: 248 ESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLING 307

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LC SGR+  A +    + R  ++  V T+   I ALC  G+++ A  +F+DM+ K
Sbjct: 308 LCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKK 362



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 75/157 (47%), Gaps = 1/157 (0%)

Query: 211 CKNK-EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           C NK E+  AL+       +G K  +  Y TL I L +++        + ++ R G+  +
Sbjct: 168 CSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREGLQPN 227

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y + I+ LCK+G + +A  +   +     + D   Y  +I G C++  L  A+E+F 
Sbjct: 228 LLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFN 287

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +       +  TY+ +I+ LC  G++++A D   +M
Sbjct: 288 RMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEM 324



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 6/135 (4%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y+ L++ L R+G    A NL+  M + +      C PN  TY   +  L +   VD A +
Sbjct: 775 YDALLSRLSRSGRWFEANNLYRSMVSQSQ-----C-PNQDTYKHFLISLLRALKVDLAMD 828

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +F  M D+    ++  Y  LI   C  +   EA+ +F +M+ + +  + + + +++N L 
Sbjct: 829 VFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLL 888

Query: 142 KNGKMDEASRLLELM 156
             G  D     L +M
Sbjct: 889 GAGYKDLCMEFLHIM 903



 Score = 44.7 bits (104), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 80/196 (40%), Gaps = 16/196 (8%)

Query: 14  GCEPNVFTYNTLINGLCR--TGHTIVAL------NLFEEMANGNGEFGVVCKP------- 58
           GC+P + TY+ LI GL      H +VAL      + F++         V+          
Sbjct: 710 GCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFE 769

Query: 59  -NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            +   Y  ++  L + G   +A  L+  M  ++  PN  TY   +     A   + A  +
Sbjct: 770 LSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDV 829

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M DQ  + ++  +  ++  LC+  +  EA  + E M+   +  +  V+  L++G   
Sbjct: 830 FKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLG 889

Query: 178 TGRVNRAEELFVSMES 193
            G  +   E    ME+
Sbjct: 890 AGYKDLCMEFLHIMET 905


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 186/365 (50%), Gaps = 8/365 (2%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           A  ++K     C PNV +YN +I+G C+  +   AL    EM     E G    P    Y
Sbjct: 83  AESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREME----ELGH--PPTPHAY 136

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           ++I+   CK G V KA ++F +M  +   P++V +N L+ G   A   +EA+ LF  M  
Sbjct: 137 SSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNS 196

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G +P+VV++N ++  LCK  K+DEA  LLE M Q  V P    Y TL+D  C   R+ +
Sbjct: 197 RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQ 256

Query: 184 AEELFVSMESMGCKHNVFSYS--ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           A E+F  M    C     +YS  ILING CK +    A  ++ EM  +GI P VV YNTL
Sbjct: 257 AYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTL 316

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +++ A +L   M     A + + Y   I  LCK   + EA +L   +R   +
Sbjct: 317 LEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGF 376

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              ++ +  L+  L ++GRL  A+EL++ + R      V + NI++  +   G +D+A+D
Sbjct: 377 VPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKD 436

Query: 362 LFLDM 366
               M
Sbjct: 437 FLKQM 441



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 188/370 (50%), Gaps = 9/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+  +++  G  P+V ++  LI G  ++G      +  + M    G F     PN +
Sbjct: 12  QAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEA-GLF-----PNAI 65

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I  LCK G + +A E +LK   ++  PNVV+YN +I G+C A +  +A     EM
Sbjct: 66  LYNNLISCLCKAGMLAEA-ESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREM 124

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P   +++ I+   CK G + +A  +   M   G  P+   +N L+ G     ++
Sbjct: 125 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKI 184

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF SM S GCK +V +Y+ +I G CK K+++ A+ L   M  + + P  V Y TL
Sbjct: 185 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 244

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI--DGLCKNGYIVEAVELFRTLRIL 299
              L +  ++++A+++F++M          AY   I  +GLCK     EA E+F+ +R  
Sbjct: 245 IDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGR 304

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                +  YN L++GL  + +L+ A EL   +   V   ++ TY I+I +LC   ++++A
Sbjct: 305 GISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEA 364

Query: 360 RDLFLDMEAK 369
             L   M  K
Sbjct: 365 FKLLSAMRDK 374



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 165/335 (49%), Gaps = 10/335 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   GCEP++  +N L++GL R      A  LF  M N  G     CKP+ V
Sbjct: 151 KAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSM-NSRG-----CKPDVV 204

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GLCK   +D+A  L  +MK E+++P  VTY +LI   C      +A  +F E 
Sbjct: 205 TYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVF-EK 263

Query: 122 MDQGVQP---NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           M +G  P      S  +++N LCK  +  EA  + + M   G+ P    YNTL++G   T
Sbjct: 264 MAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLST 323

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            ++  A EL   M       N+F+Y ILI+  CK  ++E A  L S M  KG  P + I+
Sbjct: 324 AKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIW 383

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L   L    +++ AF+L+ EM R        +    +DG+ + G + EA +  + +  
Sbjct: 384 EVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTD 443

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
                D   Y+ L+ GLC  G+   A +L   L R
Sbjct: 444 TGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVR 478



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 152/305 (49%), Gaps = 3/305 (0%)

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I  L +   V +A+ +  +MK    +P+V ++  LI GF  +  +         M++ G+
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            PN + +N +++ LCK G + EA   L+ M Q    PN   YN ++DG+C    + +A  
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
               ME +G      +YS ++  +CK   +  A+ +++EM +KG +PD+V +N L  GL+
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              ++  A +LF  M   G   D   Y T I GLCK   + EAV L   ++         
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN--IMIHALCADGKMDKARDLFL 364
            Y  LID LCK  RL+ A+E+F  +  G        Y+  I+I+ LC   +  +A+++F 
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 365 DMEAK 369
           +M  +
Sbjct: 300 EMRGR 304



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 143/301 (47%), Gaps = 43/301 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  +   GC+P+V TYNT+I GLC+      A+ L E M   +        P  V
Sbjct: 186 EARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQED------VSPTFV 239

Query: 62  TYTTIID-------------------------------------GLCKEGFVDKAKELFL 84
           TYTT+ID                                     GLCK     +AKE+F 
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
           +M+   I+P VVTYN+L+ G        +A  L   M+DQ   PN+ ++ ++++ LCK  
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           +++EA +LL  M   G  P+  ++  L+      GR++ A EL+  M  + C+  V S +
Sbjct: 360 QVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSN 419

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           IL++G  +   ++ A     +M   GI PD   Y+ L +GL    + ++A KL +E+ R 
Sbjct: 420 ILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRD 479

Query: 265 G 265
           G
Sbjct: 480 G 480


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  204 bits (518), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 188/367 (51%), Gaps = 22/367 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY+ +I  LC       A  LF+EM        V   P+  TYT +ID  CK G +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKM------VGVTPDVYTYTILIDSFCKAGLI 339

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A+ LF +M+    +P VVTY +LIH +  A    +A  +F  M+D G +PN V++  +
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 399

Query: 137 MNELCKNGKMDEASRLLELMIQIG----------------VRPNAFVYNTLMDGFCLTGR 180
           ++ LCK G + +A  +   +I                   + PN   Y  L+DG C   +
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A EL  +M S GC+ N   Y  LI+G+CK  +I+ A  ++ +M   G  P V  Y +
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 519

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   +F+  +++ A K+  +M +     +   Y   IDGLC+ G   +A++L   +    
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  Y  LIDGL K+G++ ++ +LF  + R     + VTY ++I+ LCA G +DKAR
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639

Query: 361 DLFLDME 367
            L  +M+
Sbjct: 640 LLLGEMK 646



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 197/385 (51%), Gaps = 24/385 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA----NGNGEFGVVCK 57
           +A  +F ++   GC PN  TY  L++GLC+ G+   A  ++ ++     + + +F   C+
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 58  ------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
                 PN VTY  ++DGLCK   VD A EL   M      PN + Y++LI GFC A   
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           + A+ +F++M   G  P+V ++  +++ + K+G++D A ++L  M++    PN   Y  +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K  +I+ +L L+++M  KG 
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY----IV 287
            P+ V Y  L   L     +++A  L  EM++         YR  I G  K+      I+
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGIL 675

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL---PRGVLIADVVTYN 344
           E +E + T+ I         Y  LID   K+GRL+IA EL + +   P  V   D   Y 
Sbjct: 676 EEMESYGTVPIAP------VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK-TDNDMYA 728

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +I ALC   ++++A  L+ +M  +
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRR 753



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 174/384 (45%), Gaps = 18/384 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTV 61
           A  L  ++   GC P    YN  I  +C     + + +L +      GE     C  N V
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLDLAEKIYGEMLAANCVLNKV 254

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
                   LC  G  DKA +L  +M  +   P+  TY+ +I   C+A    +A  LF EM
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V ++ ++++  CK G +++A  L E M  +G  P    Y  L+  +    +V
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------- 230
            +A ++F  M   GC+ N  +Y  L++G CK   I  A  +Y++++              
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 231 -----IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                + P+VV Y  L  GL + H+V+ A +L D M   G   +   Y   IDG CK G 
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           I  A E+F  +    Y   +  Y  LID + K GRL +A ++   + +     +VVTY  
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           MI  LC  G+ +KA  L   ME K
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEK 578



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 175/375 (46%), Gaps = 28/375 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN   +N+L++  C       A  L   M          C P  V Y   I  +C +
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG------CPPGYVVYNIFIGSICGQ 225

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D A++++ +M   N   N V   +     C    +++A  L  EMM +G  
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +++ ++  LC   K+++A  L + M  +GV P+ + Y  L+D FC  G + +A+ L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M S+GC   V +Y+ LI+ Y K K++  A  ++  M+  G +P+ V Y  L  GL +
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 248 IHQVERAFKLFDEM----------------QRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
              + +AF+++ ++                 RH +A +   Y   +DGLCK   +  A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +     E +   Y+ LIDG CK+G++  A E+F  + +   +  V TY  +I  + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 352 ADGKMDKARDLFLDM 366
            DG++D A  +   M
Sbjct: 526 KDGRLDLAMKVLSQM 540



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 22/357 (6%)

Query: 29  LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 88
           LC  G    A  L +EM       G V  P+T TY+ +I  LC    V+KA  LF +MK 
Sbjct: 263 LCGVGKFDKAFQLIKEMMRK----GFV--PDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
             + P+V TY  LI  FC A    +A+ LF EM   G  P VV++  +++   K  ++ +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 376

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM----------------E 192
           A+ +   M+  G RPN   Y  L+DG C  G +++A E++  +                +
Sbjct: 377 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 436

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 NV +Y  L++G CK  +++ A  L   MLS G +P+ ++Y+ L  G  +  +++
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F +M + G       Y + ID + K+G +  A+++   +       ++  Y  +I
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DGLC+ G  + A +L   +       +VVTY  +I  L   GK+D + DLF  M  K
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 174/437 (39%), Gaps = 83/437 (18%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN---GEFGVVC---------- 56
           L+ FG  P+  TYN L+  L   G   +   + +EM+        F V C          
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 57  -------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH 103
                        K +TV  T +I GL +  + D+A     +M+  +  PNVVTY +L+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           GF         K +   MM +G  PN   FN +++  C       A +LL  M   G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 164 NAFVYNTLMDGFCLTGR------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              VYN  +   C   +      ++ AE+++  M +  C  N  + +      C   + +
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  EM+ KG  PD   Y+ +   L    +VE+AF LF EM+  GV  D + Y   I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 278 DGLCKNGYIVEAVELFRTLR-------ILKYELDIRA----------------------- 307
           D  CK G I +A  LF  +R       ++ Y   I A                       
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 308 -----YNCLIDGLCKSGRLKIAWELFRSL----------------PRGVLIADVVTYNIM 346
                Y  L+DGLCK+G +  A+E++  L                 R  L  +VVTY  +
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 450

Query: 347 IHALCADGKMDKARDLF 363
           +  LC   K+D A +L 
Sbjct: 451 VDGLCKAHKVDHAHELL 467



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 10/293 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+++   G  P+V TY +LI+ + + G   +A+ +  +M   +      C PN V
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS------CTPNVV 550

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDGLC+ G  +KA +L   M+++  +PNVVTY +LI G   A   + +  LF +M
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN V++ V++N LC  G +D+A  LL  M Q         Y   + GF  +   
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSF 668

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML--SKGIKPDVVIYN 239
             +  +   MES G       Y +LI+ + K   +E A+ L+ EM+     +K D  +Y 
Sbjct: 669 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 728

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           +L   L    QVE AF+L+ EM R G   +   +   I GL +     EA++L
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 4/118 (3%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++  +G  P    Y  LI+   + G   +A+ L +EM     E     K +   Y ++I 
Sbjct: 677 EMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM----EVPSSVKTDNDMYASLIQ 732

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
            LC    V++A  L+ +M      P +  +  LI G      W+EA  L   +  +GV
Sbjct: 733 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 790


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 195/368 (52%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L M++   GC P+V +Y T+I+G C  G     + L +EM           KPN  
Sbjct: 128 EAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQLKG------LKPNLY 181

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++II  LCK G V + +++  +M    + P+ V Y +LI GFC   +   A  LF EM
Sbjct: 182 TYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEM 241

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ ++F+ ++  L  +GK+ EA +L   MI+ G  P+   Y  L+DG+C  G +
Sbjct: 242 EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEM 301

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  L   M  +G   NV +Y+ L +G CK+ E++ A  L  EM  KG++ ++  YNT+
Sbjct: 302 KKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTI 361

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   + +A KL +EM+  G+  DT  Y T +D   K G +V+A EL R +     
Sbjct: 362 VNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGL 421

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  +N L++GLC SG+L+    L + +    ++ +  TYN ++   C    M  + +
Sbjct: 422 QPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTE 481

Query: 362 LFLDMEAK 369
           ++  M A+
Sbjct: 482 IYRGMCAQ 489



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 194/364 (53%), Gaps = 12/364 (3%)

Query: 6   LFMKLRVFGCEP------NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           L M L+VF   P      N  +YN L+N L R G    A +L   M     EF   C P+
Sbjct: 91  LGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRM-----EFKG-CIPD 144

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V+YTTIIDG C  G + K  +L  +M+ + + PN+ TY+S+I   C +    E + +  
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLR 204

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EMM +GV P+ V +  +++  CK G    A +L   M    + P++  ++ L+ G   +G
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V  A++LF  M   G + +  +Y+ LI+GYCK  E++ A  L+++M+  G+ P+VV Y 
Sbjct: 265 KVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYT 324

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GL +  +++ A +L  EM R G+  +   Y T ++GLCK G I++AV+L   ++  
Sbjct: 325 ALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEA 384

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   Y  L+D   K+G +  A EL R +    L   VVT+N++++ LC  GK++  
Sbjct: 385 GLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDG 444

Query: 360 RDLF 363
             L 
Sbjct: 445 ERLL 448



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 183/360 (50%), Gaps = 6/360 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++      P+   ++ LI GL  +G  + A  LF EM     E      P+ VT
Sbjct: 234 AYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFE------PDEVT 287

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +IDG CK G + KA  L  +M    + PNVVTY +L  G C + + + A  L  EM 
Sbjct: 288 YTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMC 347

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+Q N+ ++N I+N LCK G + +A +L+E M + G+ P+   Y TLMD +  TG + 
Sbjct: 348 RKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMV 407

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A EL   M   G +  V ++++L+NG C + ++E    L   ML KGI P+   YN++ 
Sbjct: 408 KARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIM 467

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                 + +  + +++  M   GV  D+  Y   I G CK   + EA  L + +   ++ 
Sbjct: 468 KQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFN 527

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           L   +YN LI G  K  +L  A +LF  + R  L+A    YN+ +     +G M+   +L
Sbjct: 528 LTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 198/366 (54%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNT 60
           EA   F KL  +G   +  + N  +  L      + + L +F E      + GV    NT
Sbjct: 57  EARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFP----QLGVCW--NT 110

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  +++ L + G + +A  L ++M+ +   P+VV+Y ++I G+C+  +  +   L  E
Sbjct: 111 ESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKE 170

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN+ +++ I+  LCK+GK+ E  ++L  M++ GV P+  +Y TL+DGFC  G 
Sbjct: 171 MQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGN 230

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +LF  ME+     +  ++S LI G   + ++  A  L++EM+ KG +PD V Y  
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++ ++++AF L ++M + G+  +   Y    DGLCK+G +  A EL   +    
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +L+I  YN +++GLCK+G +  A +L   +    L  D +TY  ++ A    G+M KAR
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410

Query: 361 DLFLDM 366
           +L  +M
Sbjct: 411 ELLREM 416



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 183/359 (50%), Gaps = 9/359 (2%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           MK  VF   P+   Y TLI+G C+ G+T  A  LF EM            P+++ ++ +I
Sbjct: 207 MKRGVF---PDHVIYTTLIDGFCKLGNTQAAYKLFSEMEARE------IVPDSIAFSALI 257

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GL   G V +A +LF +M  +   P+ VTY +LI G+C   +  +A  L  +M+  G+ 
Sbjct: 258 CGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLT 317

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PNVV++  + + LCK+G++D A+ LL  M + G++ N   YNT+++G C  G + +A +L
Sbjct: 318 PNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKL 377

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M+  G   +  +Y+ L++ Y K  E+  A  L  EML +G++P VV +N L  GL  
Sbjct: 378 MEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCM 437

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             ++E   +L   M   G+  +   Y + +   C    +  + E++R +       D   
Sbjct: 438 SGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNT 497

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           YN LI G CK+  +K AW L + +          +YN +I       K+ +AR LF +M
Sbjct: 498 YNILIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEM 556



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 41/327 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++   G EP+  TY  LI+G C+ G    A  L  +M     + G+   PN 
Sbjct: 267 VEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMV----QIGLT--PNV 320

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA------------ 108
           VTYT + DGLCK G +D A EL  +M  + +  N+ TYN++++G C A            
Sbjct: 321 VTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEE 380

Query: 109 -----------------------NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                                   +  +A+ L  EM+D+G+QP VV+FNV+MN LC +GK
Sbjct: 381 MKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGK 440

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +++  RLL+ M++ G+ PNA  YN++M  +C+   +  + E++  M + G   +  +Y+I
Sbjct: 441 LEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNI 500

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI G+CK + ++ A  L+ EM+ K        YN L  G F+  ++  A +LF+EM+R G
Sbjct: 501 LIKGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREG 560

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVEL 292
           + A    Y  F+D   + G +   +EL
Sbjct: 561 LVASAEIYNLFVDMNYEEGNMETTLEL 587



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/356 (28%), Positives = 173/356 (48%), Gaps = 9/356 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT-YTTIIDGLC 71
           +G +P+VF  +     L   G    A   F+++ N    +GV     +   Y T +    
Sbjct: 35  WGSDPHVF--DVFFQVLVEAGLLNEARKFFDKLLN----YGVALSAGSCNLYLTCLSS-- 86

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           K   +    ++F +     +  N  +YN L++         EA  L + M  +G  P+VV
Sbjct: 87  KRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVV 146

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           S+  I++  C  G++ +  +L++ M   G++PN + Y++++   C +G+V   E++   M
Sbjct: 147 SYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREM 206

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   +   Y+ LI+G+CK    + A  L+SEM ++ I PD + ++ L  GL    +V
Sbjct: 207 MKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKV 266

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             A KLF+EM + G   D   Y   IDG CK G + +A  L   +  +    ++  Y  L
Sbjct: 267 VEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTAL 326

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            DGLCKSG L  A EL   + R  L  ++ TYN +++ LC  G + +A  L  +M+
Sbjct: 327 ADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382



 Score =  102 bits (253), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 117/251 (46%), Gaps = 41/251 (16%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N+ TYNT++NGLC+ G+ + A+ L EEM     E G+   P+T+TYTT++D   K 
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK----EAGL--HPDTITYTTLMDAYYKT 403

Query: 74  GFVDKAKELFLKMKDENINPNVV-----------------------------------TY 98
           G + KA+EL  +M D  + P VV                                   TY
Sbjct: 404 GEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATY 463

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           NS++  +C  N+   +  ++  M  QGV P+  ++N+++   CK   M EA  L + M++
Sbjct: 464 NSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 523

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
                 A  YN L+ GF    ++  A +LF  M   G   +   Y++ ++   +   +E 
Sbjct: 524 KRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMET 583

Query: 219 ALSLYSEMLSK 229
            L L  E + K
Sbjct: 584 TLELCDEAIEK 594



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 3/220 (1%)

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           RL+      G  P+  V++         G +N A + F  + + G   +  S ++ +   
Sbjct: 27  RLIYTYKDWGSDPH--VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCL 84

Query: 211 CKNKEIEG-ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
              +++ G  L ++SE    G+  +   YN L   LF + ++  A  L   M+  G   D
Sbjct: 85  SSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPD 144

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
             +Y T IDG C  G + + V+L + +++   + ++  Y+ +I  LCKSG++    ++ R
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLR 204

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +  +  D V Y  +I   C  G    A  LF +MEA+
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAR 244


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  204 bits (518), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 188/367 (51%), Gaps = 22/367 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY+ +I  LC       A  LF+EM        V   P+  TYT +ID  CK G +
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKM------VGVTPDVYTYTILIDSFCKAGLI 339

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A+ LF +M+    +P VVTY +LIH +  A    +A  +F  M+D G +PN V++  +
Sbjct: 340 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 399

Query: 137 MNELCKNGKMDEASRLLELMIQIG----------------VRPNAFVYNTLMDGFCLTGR 180
           ++ LCK G + +A  +   +I                   + PN   Y  L+DG C   +
Sbjct: 400 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 459

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A EL  +M S GC+ N   Y  LI+G+CK  +I+ A  ++ +M   G  P V  Y +
Sbjct: 460 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 519

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   +F+  +++ A K+  +M +     +   Y   IDGLC+ G   +A++L   +    
Sbjct: 520 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 579

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  Y  LIDGL K+G++ ++ +LF  + R     + VTY ++I+ LCA G +DKAR
Sbjct: 580 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 639

Query: 361 DLFLDME 367
            L  +M+
Sbjct: 640 LLLGEMK 646



 Score =  193 bits (491), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 197/385 (51%), Gaps = 24/385 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA----NGNGEFGVVCK 57
           +A  +F ++   GC PN  TY  L++GLC+ G+   A  ++ ++     + + +F   C+
Sbjct: 376 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 435

Query: 58  ------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
                 PN VTY  ++DGLCK   VD A EL   M      PN + Y++LI GFC A   
Sbjct: 436 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 495

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           + A+ +F++M   G  P+V ++  +++ + K+G++D A ++L  M++    PN   Y  +
Sbjct: 496 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 555

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K  +I+ +L L+++M  KG 
Sbjct: 556 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 615

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY----IV 287
            P+ V Y  L   L     +++A  L  EM++         YR  I G  K+      I+
Sbjct: 616 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGIL 675

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL---PRGVLIADVVTYN 344
           E +E + T+ I         Y  LID   K+GRL+IA EL + +   P  V   D   Y 
Sbjct: 676 EEMESYGTVPIAP------VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK-TDNDMYA 728

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +I ALC   ++++A  L+ +M  +
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRR 753



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 174/384 (45%), Gaps = 18/384 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTV 61
           A  L  ++   GC P    YN  I  +C     + + +L +      GE     C  N V
Sbjct: 196 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLDLAEKIYGEMLAANCVLNKV 254

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
                   LC  G  DKA +L  +M  +   P+  TY+ +I   C+A    +A  LF EM
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V ++ ++++  CK G +++A  L E M  +G  P    Y  L+  +    +V
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------- 230
            +A ++F  M   GC+ N  +Y  L++G CK   I  A  +Y++++              
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434

Query: 231 -----IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                + P+VV Y  L  GL + H+V+ A +L D M   G   +   Y   IDG CK G 
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           I  A E+F  +    Y   +  Y  LID + K GRL +A ++   + +     +VVTY  
Sbjct: 495 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 554

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           MI  LC  G+ +KA  L   ME K
Sbjct: 555 MIDGLCRIGESEKALKLLSLMEEK 578



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 175/375 (46%), Gaps = 28/375 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN   +N+L++  C       A  L   M          C P  V Y   I  +C +
Sbjct: 172 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG------CPPGYVVYNIFIGSICGQ 225

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D A++++ +M   N   N V   +     C    +++A  L  EMM +G  
Sbjct: 226 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 285

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +++ ++  LC   K+++A  L + M  +GV P+ + Y  L+D FC  G + +A+ L
Sbjct: 286 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 345

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M S+GC   V +Y+ LI+ Y K K++  A  ++  M+  G +P+ V Y  L  GL +
Sbjct: 346 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 405

Query: 248 IHQVERAFKLFDEM----------------QRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
              + +AF+++ ++                 RH +A +   Y   +DGLCK   +  A E
Sbjct: 406 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 465

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +     E +   Y+ LIDG CK+G++  A E+F  + +   +  V TY  +I  + 
Sbjct: 466 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 525

Query: 352 ADGKMDKARDLFLDM 366
            DG++D A  +   M
Sbjct: 526 KDGRLDLAMKVLSQM 540



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 22/357 (6%)

Query: 29  LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 88
           LC  G    A  L +EM       G V  P+T TY+ +I  LC    V+KA  LF +MK 
Sbjct: 263 LCGVGKFDKAFQLIKEMMRK----GFV--PDTSTYSKVITFLCHATKVEKAFLLFQEMKM 316

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
             + P+V TY  LI  FC A    +A+ LF EM   G  P VV++  +++   K  ++ +
Sbjct: 317 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 376

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM----------------E 192
           A+ +   M+  G RPN   Y  L+DG C  G +++A E++  +                +
Sbjct: 377 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 436

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 NV +Y  L++G CK  +++ A  L   MLS G +P+ ++Y+ L  G  +  +++
Sbjct: 437 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 496

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F +M + G       Y + ID + K+G +  A+++   +       ++  Y  +I
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 556

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DGLC+ G  + A +L   +       +VVTY  +I  L   GK+D + DLF  M  K
Sbjct: 557 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 613



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 174/437 (39%), Gaps = 83/437 (18%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN---GEFGVVC---------- 56
           L+ FG  P+  TYN L+  L   G   +   + +EM+        F V C          
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 57  -------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH 103
                        K +TV  T +I GL +  + D+A     +M+  +  PNVVTY +L+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           GF         K +   MM +G  PN   FN +++  C       A +LL  M   G  P
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPP 210

Query: 164 NAFVYNTLMDGFCLTGR------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              VYN  +   C   +      ++ AE+++  M +  C  N  + +      C   + +
Sbjct: 211 GYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFD 270

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  EM+ KG  PD   Y+ +   L    +VE+AF LF EM+  GV  D + Y   I
Sbjct: 271 KAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILI 330

Query: 278 DGLCKNGYIVEAVELFRTLR-------ILKYELDIRA----------------------- 307
           D  CK G I +A  LF  +R       ++ Y   I A                       
Sbjct: 331 DSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCR 390

Query: 308 -----YNCLIDGLCKSGRLKIAWELFRSL----------------PRGVLIADVVTYNIM 346
                Y  L+DGLCK+G +  A+E++  L                 R  L  +VVTY  +
Sbjct: 391 PNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGAL 450

Query: 347 IHALCADGKMDKARDLF 363
           +  LC   K+D A +L 
Sbjct: 451 VDGLCKAHKVDHAHELL 467



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 10/293 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+++   G  P+V TY +LI+ + + G   +A+ +  +M   +      C PN V
Sbjct: 497 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS------CTPNVV 550

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDGLC+ G  +KA +L   M+++  +PNVVTY +LI G   A   + +  LF +M
Sbjct: 551 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 610

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN V++ V++N LC  G +D+A  LL  M Q         Y   + GF  +   
Sbjct: 611 SRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSF 668

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML--SKGIKPDVVIYN 239
             +  +   MES G       Y +LI+ + K   +E A+ L+ EM+     +K D  +Y 
Sbjct: 669 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 728

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           +L   L    QVE AF+L+ EM R G   +   +   I GL +     EA++L
Sbjct: 729 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 188/367 (51%), Gaps = 22/367 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY+ +I  LC       A  LF+EM        V   P+  TYT +ID  CK G +
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKM------VGVTPDVYTYTILIDSFCKAGLI 274

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A+ LF +M+    +P VVTY +LIH +  A    +A  +F  M+D G +PN V++  +
Sbjct: 275 EQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGAL 334

Query: 137 MNELCKNGKMDEASRLLELMIQIG----------------VRPNAFVYNTLMDGFCLTGR 180
           ++ LCK G + +A  +   +I                   + PN   Y  L+DG C   +
Sbjct: 335 VDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHK 394

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A EL  +M S GC+ N   Y  LI+G+CK  +I+ A  ++ +M   G  P V  Y +
Sbjct: 395 VDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTS 454

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   +F+  +++ A K+  +M +     +   Y   IDGLC+ G   +A++L   +    
Sbjct: 455 LIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKG 514

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  Y  LIDGL K+G++ ++ +LF  + R     + VTY ++I+ LCA G +DKAR
Sbjct: 515 CSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKAR 574

Query: 361 DLFLDME 367
            L  +M+
Sbjct: 575 LLLGEMK 581



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 197/385 (51%), Gaps = 24/385 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA----NGNGEFGVVCK 57
           +A  +F ++   GC PN  TY  L++GLC+ G+   A  ++ ++     + + +F   C+
Sbjct: 311 QANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCE 370

Query: 58  ------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
                 PN VTY  ++DGLCK   VD A EL   M      PN + Y++LI GFC A   
Sbjct: 371 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 430

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           + A+ +F++M   G  P+V ++  +++ + K+G++D A ++L  M++    PN   Y  +
Sbjct: 431 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 490

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K  +I+ +L L+++M  KG 
Sbjct: 491 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGC 550

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY----IV 287
            P+ V Y  L   L     +++A  L  EM++         YR  I G  K+      I+
Sbjct: 551 SPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGIL 610

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL---PRGVLIADVVTYN 344
           E +E + T+ I         Y  LID   K+GRL+IA EL + +   P  V   D   Y 
Sbjct: 611 EEMESYGTVPIAP------VYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVK-TDNDMYA 663

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +I ALC   ++++A  L+ +M  +
Sbjct: 664 SLIQALCLASQVEEAFRLYSEMTRR 688



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 174/384 (45%), Gaps = 18/384 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTV 61
           A  L  ++   GC P    YN  I  +C     + + +L +      GE     C  N V
Sbjct: 131 AYKLLNRMTTCGCPPGYVVYNIFIGSICGQ-EKLPSPDLLDLAEKIYGEMLAANCVLNKV 189

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
                   LC  G  DKA +L  +M  +   P+  TY+ +I   C+A    +A  LF EM
Sbjct: 190 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 249

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P+V ++ ++++  CK G +++A  L E M  +G  P    Y  L+  +    +V
Sbjct: 250 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 309

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG----------- 230
            +A ++F  M   GC+ N  +Y  L++G CK   I  A  +Y++++              
Sbjct: 310 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 369

Query: 231 -----IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                + P+VV Y  L  GL + H+V+ A +L D M   G   +   Y   IDG CK G 
Sbjct: 370 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           I  A E+F  +    Y   +  Y  LID + K GRL +A ++   + +     +VVTY  
Sbjct: 430 IDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTA 489

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           MI  LC  G+ +KA  L   ME K
Sbjct: 490 MIDGLCRIGESEKALKLLSLMEEK 513



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 175/375 (46%), Gaps = 28/375 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN   +N+L++  C       A  L   M          C P  V Y   I  +C +
Sbjct: 107 GCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCG------CPPGYVVYNIFIGSICGQ 160

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D A++++ +M   N   N V   +     C    +++A  L  EMM +G  
Sbjct: 161 EKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFV 220

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +++ ++  LC   K+++A  L + M  +GV P+ + Y  L+D FC  G + +A+ L
Sbjct: 221 PDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWL 280

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M S+GC   V +Y+ LI+ Y K K++  A  ++  M+  G +P+ V Y  L  GL +
Sbjct: 281 FEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCK 340

Query: 248 IHQVERAFKLFDEM----------------QRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
              + +AF+++ ++                 RH +A +   Y   +DGLCK   +  A E
Sbjct: 341 AGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHE 400

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +     E +   Y+ LIDG CK+G++  A E+F  + +   +  V TY  +I  + 
Sbjct: 401 LLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMF 460

Query: 352 ADGKMDKARDLFLDM 366
            DG++D A  +   M
Sbjct: 461 KDGRLDLAMKVLSQM 475



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 173/357 (48%), Gaps = 22/357 (6%)

Query: 29  LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 88
           LC  G    A  L +EM       G V  P+T TY+ +I  LC    V+KA  LF +MK 
Sbjct: 198 LCGVGKFDKAFQLIKEMMRK----GFV--PDTSTYSKVITFLCHATKVEKAFLLFQEMKM 251

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
             + P+V TY  LI  FC A    +A+ LF EM   G  P VV++  +++   K  ++ +
Sbjct: 252 VGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQ 311

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM----------------E 192
           A+ +   M+  G RPN   Y  L+DG C  G +++A E++  +                +
Sbjct: 312 ANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCED 371

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 NV +Y  L++G CK  +++ A  L   MLS G +P+ ++Y+ L  G  +  +++
Sbjct: 372 RHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKID 431

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F +M + G       Y + ID + K+G +  A+++   +       ++  Y  +I
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMI 491

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DGLC+ G  + A +L   +       +VVTY  +I  L   GK+D + DLF  M  K
Sbjct: 492 DGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRK 548



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 166/401 (41%), Gaps = 66/401 (16%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FT     + LC+ G    AL++ E       +F    K +TV  T +I GL +  + D+A
Sbjct: 11  FTVGCFAHALCKEGRWADALDMIER-----EDF----KLDTVLCTHMISGLMEASYFDEA 61

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
                +M+  +  PNVVTY +L+ GF         K +   MM +G  PN   FN +++ 
Sbjct: 62  MSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHS 121

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR------VNRAEELFVSMES 193
            C       A +LL  M   G  P   VYN  +   C   +      ++ AE+++  M +
Sbjct: 122 YCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLA 181

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C  N  + +      C   + + A  L  EM+ KG  PD   Y+ +   L    +VE+
Sbjct: 182 ANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEK 241

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-------ILKYELDIR 306
           AF LF EM+  GV  D + Y   ID  CK G I +A  LF  +R       ++ Y   I 
Sbjct: 242 AFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 301

Query: 307 A----------------------------YNCLIDGLCKSGRLKIAWELFRSL------- 331
           A                            Y  L+DGLCK+G +  A+E++  L       
Sbjct: 302 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 361

Query: 332 ---------PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
                     R  L  +VVTY  ++  LC   K+D A +L 
Sbjct: 362 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELL 402



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 148/293 (50%), Gaps = 10/293 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+++   G  P+V TY +LI+ + + G   +A+ +  +M   +      C PN V
Sbjct: 432 SAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS------CTPNVV 485

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDGLC+ G  +KA +L   M+++  +PNVVTY +LI G   A   + +  LF +M
Sbjct: 486 TYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQM 545

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN V++ V++N LC  G +D+A  LL  M Q         Y   + GF  +   
Sbjct: 546 SRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSF 603

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML--SKGIKPDVVIYN 239
             +  +   MES G       Y +LI+ + K   +E A+ L+ EM+     +K D  +Y 
Sbjct: 604 IASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYA 663

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           +L   L    QVE AF+L+ EM R G   +   +   I GL +     EA++L
Sbjct: 664 SLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score = 44.3 bits (103), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 50/118 (42%), Gaps = 4/118 (3%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++  +G  P    Y  LI+   + G   +A+ L +EM     E     K +   Y ++I 
Sbjct: 612 EMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMM----EVPSSVKTDNDMYASLIQ 667

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
            LC    V++A  L+ +M      P +  +  LI G      W+EA  L   +  +GV
Sbjct: 668 ALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEGV 725


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  203 bits (517), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 131/399 (32%), Positives = 201/399 (50%), Gaps = 50/399 (12%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL+  ++  G EPNVFTYN L+  LC+ G    A  L  EM+N        C P+ V+YT
Sbjct: 165 ALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKG------CDPDDVSYT 218

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I  +CK G VDKA+EL +K +     P V  YN+LIHG C    + EA  L  EM+D+
Sbjct: 219 TVISSMCKLGDVDKARELAMKFE-----PVVPVYNALIHGVCKECRFKEAFDLMNEMVDR 273

Query: 125 GVQPNVVSFNVIMNEL--------------------CK---------------NGKMDEA 149
           GV PNV+S++ +++ L                    C+                G++ +A
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             L  LMI+ GV PN   YNTL+ G C  G ++ A  ++  ME    + NV +YS +I G
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           + K+ ++  A   +++M++ G +P+VV+Y  +   L ++   ++AF L D M   G    
Sbjct: 394 FAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPT 453

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKSGRLKIAWEL 327
              +  FI GLC+ G +  A+ +   +   KYE   +IR YN L+DGL ++   + A  L
Sbjct: 454 VITFNNFIKGLCRAGRVEWAMNVLDQME--KYECLPNIRTYNELLDGLFRANAFREACGL 511

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            R L    +  D VTYN +++    +G   +   L   M
Sbjct: 512 IRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKM 550



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 178/354 (50%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP V  YN LI+G+C+      A +L  EM +     GV   PN ++Y+T+I  L   G 
Sbjct: 241 EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDR----GV--DPNVISYSTVISCLSDMGN 294

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V+ +  +F +M      PNV T+ SLI GF       +A  L+  M+ +GV PNVV++N 
Sbjct: 295 VELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNT 354

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC +G MDEA  +   M +  +RPN   Y+T++ GF  +G +  A E +  M + G
Sbjct: 355 LIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG 414

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+ NV  Y+ +++  C+    + A  L   M+S G  P V+ +N    GL    +VE A 
Sbjct: 415 CRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAM 474

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            + D+M+++    +   Y   +DGL +     EA  L R L   K E D   YN ++ G 
Sbjct: 475 NVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGF 534

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +G  +   +L   +    +  D +T N  ++A C  GK+  A  +  ++ A+
Sbjct: 535 SFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAE 588



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 191/368 (51%), Gaps = 15/368 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCKPN 59
           +   +F ++R FGCEP+V  YN +++ L       ++ NLF+ M N   N       +PN
Sbjct: 127 QGLKMFYRIREFGCEPSVKIYNLVLDAL-------LSQNLFK-MINALYNNMKSEGLEPN 178

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY  ++  LC+ G VD A +L ++M ++  +P+ V+Y ++I   C   D ++A+ L +
Sbjct: 179 VFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAM 238

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +      +P V  +N +++ +CK  +  EA  L+  M+  GV PN   Y+T++      G
Sbjct: 239 KF-----EPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMG 293

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V  +  +F  M   GC+ NV +++ LI G+     +  A+ L++ M+ +G+ P+VV YN
Sbjct: 294 NVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYN 353

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL     ++ A  ++++M++  +  +   Y T I G  K+G +V A E +  +   
Sbjct: 354 TLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINC 413

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++  Y C++D LC+      A++L  ++        V+T+N  I  LC  G+++ A
Sbjct: 414 GCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWA 473

Query: 360 RDLFLDME 367
            ++   ME
Sbjct: 474 MNVLDQME 481



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 177/351 (50%), Gaps = 7/351 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +PNV +Y+T+I+ L   G+  ++L +F  M      F   C+PN  
Sbjct: 262 EAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRM------FVRGCRPNVQ 315

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T++I G    G V  A  L+  M  E ++PNVV YN+LIHG C   + +EA  ++ +M
Sbjct: 316 TFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQM 375

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++PNV +++ I+    K+G +  A      MI  G RPN  VY  ++D  C     
Sbjct: 376 EKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMF 435

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A +L  +M S GC   V +++  I G C+   +E A+++  +M      P++  YN L
Sbjct: 436 DQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNEL 495

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF  +    A  L  E++   V  D   Y T + G   NG   + ++L   + +   
Sbjct: 496 LDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGI 555

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLP-RGVLIADVVTYNIMIHALC 351
           +LD    N  ++  CK G++K A ++  ++       AD++T+ I++  +C
Sbjct: 556 KLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGIC 606



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 183/363 (50%), Gaps = 10/363 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           + A+F ++ V GC PNV T+ +LI G    G    A+ L+  M       GV   PN V 
Sbjct: 298 SLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIRE----GV--SPNVVA 351

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I GLC +G +D+A  ++ +M+ ++I PNV TY+++I+GF  + D   A   + +M+
Sbjct: 352 YNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMI 411

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G +PNVV +  +++ LC+    D+A  L++ MI  G  P    +N  + G C  GRV 
Sbjct: 412 NCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVE 471

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   ME   C  N+ +Y+ L++G  +      A  L  E+  + ++ D V YNT+ 
Sbjct: 472 WAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIM 531

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-Y 301
            G       ++  +L  +M  +G+  DT    T ++  CK G +  A+++   +   K +
Sbjct: 532 YGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEF 591

Query: 302 ELDIRAYNCLIDGLCKS-GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD-GKMDKA 359
             DI  +  ++ G+C   G  +    L   L RG+   ++ T+N+++    +  G M   
Sbjct: 592 RADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIF-PNIATWNVLVRGFFSKLGHMGPI 650

Query: 360 RDL 362
           R L
Sbjct: 651 RIL 653



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 168/338 (49%), Gaps = 11/338 (3%)

Query: 31  RTGHTIVA-LNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           R  H IV+ L  F+ ++N +G F    K   +TY T+ID L +   +D    L  +MK E
Sbjct: 49  RQEHDIVSSLEYFKSLSN-SGTF----KHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLE 103

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N+  +   +  +I  +  +N   +   +F  + + G +P+V  +N++++ L         
Sbjct: 104 NVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMI 163

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
           + L   M   G+ PN F YN L+   C  G+V+ A +L V M + GC  +  SY+ +I+ 
Sbjct: 164 NALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISS 223

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            CK  +++ A       L+   +P V +YN L  G+ +  + + AF L +EM   GV  +
Sbjct: 224 MCKLGDVDKA-----RELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPN 278

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
             +Y T I  L   G +  ++ +F  + +     +++ +  LI G    GR+  A  L+ 
Sbjct: 279 VISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWN 338

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            + R  +  +VV YN +IH LC+DG MD+A  ++  ME
Sbjct: 339 LMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQME 376



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 7/280 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +++ ++      PNV TY+T+I G  ++G  + A   + +M N        C+PN V
Sbjct: 367 EAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCG------CRPNVV 420

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++D LC+    D+A +L   M  +   P V+T+N+ I G C A     A  +  +M
Sbjct: 421 VYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQM 480

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PN+ ++N +++ L +     EA  L+  + +  V  +   YNT+M GF   G  
Sbjct: 481 EKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMH 540

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNT 240
            +  +L   M   G K +  + +  +N YCK  +++ A+ +   + + K  + D++ +  
Sbjct: 541 QQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTI 600

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +  G+      E A     EM + G+  +   +   + G 
Sbjct: 601 ILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVRGF 640



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 1/159 (0%)

Query: 212 KNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           +  +I  +L  +  + + G  K   + Y T+   L   ++++    L  +M+   V    
Sbjct: 50  QEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQ 109

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             ++  I    ++    + +++F  +R    E  ++ YN ++D L      K+   L+ +
Sbjct: 110 ELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNN 169

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    L  +V TYN+++ ALC +GK+D A  L ++M  K
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNK 208


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 181/339 (53%), Gaps = 12/339 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+ +T+N+LI G CRT    VA +LF++M   G  +       + V+Y T+I+GLC+
Sbjct: 5   GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ-------DVVSYATLIEGLCE 57

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D+A ELF +M      P++  Y +L+ G C A    E   +   M + G +P+  +
Sbjct: 58  AGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRA 113

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  C+  K  EA  +L+ M + G+ P       +++ +C  GR++ A  +   M+
Sbjct: 114 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 173

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GCK NV++Y+ L+ G+C   ++  A++L ++M + G+ PD V YN L  G      +E
Sbjct: 174 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 233

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF+L   M+  G+ AD + Y   I+ LCK+G   +A  LF +L     + +   +N LI
Sbjct: 234 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 293

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           +GLCKSG+  IAW+    +       D  TY+  I  LC
Sbjct: 294 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 332



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 189/389 (48%), Gaps = 25/389 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------- 49
           A  LF K+ + G   +V +Y TLI GLC  G    A+ LF EM   +             
Sbjct: 29  ARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCN 88

Query: 50  ---GEFGVV---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
              GE G++          +P+T  Y  ++D  C+E    +A+E+  +M ++ + P VVT
Sbjct: 89  AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 148

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
             ++I+ +C     ++A  +   M  +G +PNV ++N ++   C  GK+ +A  LL  M 
Sbjct: 149 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 208

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             GV P+A  YN L+ G C+ G +  A  L   ME  G   + ++Y+ LIN  CK+   +
Sbjct: 209 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 268

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A SL+  + ++GIKP+ V +N+L  GL +  + + A+K  ++M   G   DT+ Y +FI
Sbjct: 269 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFI 328

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           + LCK     E +     +     +     Y  +I  L K     +    +  +      
Sbjct: 329 EHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN 388

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
            DVVTY   + A C +G++++A ++ ++M
Sbjct: 389 PDVVTYTTSMRAYCIEGRLNEAENVLMEM 417



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 162/349 (46%), Gaps = 6/349 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G  P V T   +IN  C+ G    AL + E M          CKPN  
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG------CKPNVW 182

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G C EG V KA  L  KM+   +NP+ VTYN LI G C       A  L   M
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 242

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  +  ++N ++N LCK+G+ D+A  L + +   G++PNA  +N+L++G C +G+ 
Sbjct: 243 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 302

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +    M S GC  + ++YS  I   CK K  +  LS   EML K +KP  V Y  +
Sbjct: 303 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 362

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +        + + EM   G   D   Y T +   C  G + EA  +   +     
Sbjct: 363 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 422

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +D  AYN L+DG    G+   A  + + +     + +  TY I++  L
Sbjct: 423 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 471



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 23/367 (6%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           +TYN LIN LC+ G T  A +LF+ +           KPN VT+ ++I+GLCK G  D A
Sbjct: 252 YTYNALINALCKDGRTDQACSLFDSLETRG------IKPNAVTFNSLINGLCKSGKADIA 305

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            +   KM      P+  TY+S I   C      E      EM+ + V+P+ V++ +++++
Sbjct: 306 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 365

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L K       +R    M+  G  P+   Y T M  +C+ GR+N AE + + M   G   +
Sbjct: 366 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 425

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE------- 252
             +Y+ L++G+    + + A+S+  +M S    P+   Y  L   L  +  VE       
Sbjct: 426 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 485

Query: 253 ----------RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                       F LFD M+++    ++  Y + ++G  ++G   EA  L   ++     
Sbjct: 486 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 545

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           L+   Y  L+   CKS R   AW L  S+ +   I  +++Y  ++  L  +G+ DKA+++
Sbjct: 546 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 605

Query: 363 FLDMEAK 369
           F++   K
Sbjct: 606 FMNSRWK 612



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 141/277 (50%), Gaps = 4/277 (1%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  T+NSLI G+C  N  + A+ LF +M  +G   +VVS+  ++  LC+ G++DEA  L
Sbjct: 8   PDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVEL 67

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M Q    P+  +Y  L+ G C   R      +   M+ +G + +  +Y+ +++  C+
Sbjct: 68  FGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCR 123

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            ++ + A  +  EM  KG+ P VV    +     +  ++  A ++ + M+  G   + W 
Sbjct: 124 ERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWT 183

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + G C  G + +A+ L   +R      D   YN LI G C  G ++ A+ L R + 
Sbjct: 184 YNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLME 243

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              LIAD  TYN +I+ALC DG+ D+A  LF  +E +
Sbjct: 244 GDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 280



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 166/401 (41%), Gaps = 58/401 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF  L   G +PN  T+N+LINGLC++G   +A    E+M +        C P+T 
Sbjct: 269 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG------CTPDTY 322

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++ I+ LCK     +      +M  +++ P+ V Y  +IH      ++      + EM
Sbjct: 323 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 382

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++   M   C  G+++EA  +L  M + GV  +   YNTLMDG    G+ 
Sbjct: 383 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 442

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--------- 232
           + A  +   M S+    N F+Y IL+    + + +E  L L    + K I+         
Sbjct: 443 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 502

Query: 233 --------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQ---------------------- 262
                   P+   Y+++  G  E  + E A  L   M+                      
Sbjct: 503 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 562

Query: 263 -------------RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
                        +HG      +Y+  + GL   G   +A E+F   R   Y  D   + 
Sbjct: 563 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWK 622

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +IDGL K G   I+ E+   L R        TY ++   L
Sbjct: 623 VIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 663



 Score =  103 bits (258), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 109/248 (43%), Gaps = 39/248 (15%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G RP+A+ +N+L+ G+C T +V+ A +LF  M   G   +V SY+ LI G C+   
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A+ L+ EM     +PD+ +Y  L  GL    + E    +   M+  G    T AY  
Sbjct: 61  IDEAVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 276 FID-----------------------------------GLCKNGYIVEAVELFRTLRILK 300
            +D                                     CK G + +A+ +   +++  
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + ++  YN L+ G C  G++  A  L   +    +  D VTYN++I   C DG ++ A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 361 DLFLDMEA 368
            L   ME 
Sbjct: 237 RLLRLMEG 244



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L   +   G  P + +Y  L++GL   G T  A  +F  M +   ++     P+ 
Sbjct: 565 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF--MNSRWKDYS----PDE 618

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
           + +  IIDGL K+G  D ++E+ + ++  N  P+  TY  L
Sbjct: 619 IVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 659


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 202/435 (46%), Gaps = 76/435 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   G +PNV  Y TL++G  + G    A ++  EM +     GV  +PN +
Sbjct: 333 EAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISA----GV--QPNKI 386

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I GLCK G + +A +L  +M      P+  TY+ L+ G     D + A  L  EM
Sbjct: 387 MYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEM 446

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY------------- 168
            + G+ PN  ++ +++N LC+NG+  EA  LLE MI  G++PNAF+Y             
Sbjct: 447 RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHI 506

Query: 169 ----------------------NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                 N+L+ G    GR+  AEE +  ++  G   + F+YS L
Sbjct: 507 SLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGL 566

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER------------- 253
           I+GYCK + +E A  L  +ML+ G+KP+   Y  L  G F+ +  E+             
Sbjct: 567 IHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGD 626

Query: 254 ----------------------AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
                                 AF +  E++++G+  D   Y + I GLCK   + +AV 
Sbjct: 627 KPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVG 686

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +     E  I  YN LIDG C+SG +  A  +F S+    L+ + VTY  +I   C
Sbjct: 687 LLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNC 746

Query: 352 ADGKMDKARDLFLDM 366
            +G +  A DL+ DM
Sbjct: 747 KNGDITDAFDLYKDM 761



 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 188/369 (50%), Gaps = 10/369 (2%)

Query: 2   EAAALFMKLRVF----GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           +A  L  KL+ F    G  P+V+TY+T +   C+      A  +FEEM   +      C 
Sbjct: 224 DAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRD------CA 277

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            N VTY  +I GLC+ G V++A     +M D  ++P+  TY +L++G C      EAK L
Sbjct: 278 MNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKAL 337

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM   G++PNVV +  +++   K GK  EA  +L  MI  GV+PN  +Y+ L+ G C 
Sbjct: 338 LDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCK 397

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++ RA +L   M  +G + + F+Y  L+ G+ ++ + +GA  L +EM + GI P+   
Sbjct: 398 IGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYT 457

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  +  GL +  + + A  L +EM   G+  + + Y   I G  K G+I  A E    + 
Sbjct: 458 YGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMT 517

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN LI GL   GR++ A E +  + +  L+ D  TY+ +IH  C    ++
Sbjct: 518 KANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLE 577

Query: 358 KARDLFLDM 366
           KA  L   M
Sbjct: 578 KADQLLQQM 586



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 183/388 (47%), Gaps = 32/388 (8%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM------------------AN 47
           L  ++R  G  PN +TY  +INGLC+ G +  A NL EEM                   +
Sbjct: 442 LLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHS 501

Query: 48  GNGEFGVVCK-----------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
             G   + C+           P+   Y ++I GL   G +++A+E + +++   + P+  
Sbjct: 502 KEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEF 561

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           TY+ LIHG+C   +  +A  L  +M++ G++PN  ++  ++    K+   ++ S +L+ M
Sbjct: 562 TYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSM 621

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +  G +P+  +Y  ++     +  +  A  +   +E  G   ++  YS LI+G CK  ++
Sbjct: 622 LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADM 681

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A+ L  EM  +G++P +V YN L  G      + RA  +FD +   G+  +   Y   
Sbjct: 682 EKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTAL 741

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGV 335
           IDG CKNG I +A +L++ +       D   YN L  G   +  L+ A  L   +  RG 
Sbjct: 742 IDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY 801

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLF 363
             A V  ++ ++   C  G++ +   L 
Sbjct: 802 --AHVSLFSTLVRGFCKRGRLQETEKLL 827



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 171/380 (45%), Gaps = 70/380 (18%)

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKD------------------------------- 88
           T     ++D   K G V  A ++ L M D                               
Sbjct: 175 TAVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKG 234

Query: 89  ----ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
                 I P+V TY++ +   C A D++ AK +F EM  +    N V++NV+++ LC++G
Sbjct: 235 FMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSG 294

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            ++EA    E M+  G+ P+AF Y  LM+G C  GR+  A+ L   M   G K NV  Y+
Sbjct: 295 AVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER----------- 253
            L++G+ K  +   A  + +EM+S G++P+ ++Y+ L  GL +I Q+ R           
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKV 414

Query: 254 ------------------------AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
                                   AF+L +EM+  G+  + + Y   I+GLC+NG   EA
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEA 474

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
             L   +     + +   Y  LI G  K G + +A E   ++ +  ++ D+  YN +I  
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534

Query: 350 LCADGKMDKARDLFLDMEAK 369
           L   G++++A + +  ++ +
Sbjct: 535 LSTVGRIEEAEEYYAQVQKR 554



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/233 (29%), Positives = 110/233 (47%), Gaps = 24/233 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNT 60
           +A  L  ++   G EP +  YN LI+G CR+G    A N+F+  +A G         PN 
Sbjct: 683 KAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKG-------LLPNC 735

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +IDG CK G +  A +L+  M D  I P+   YN L  G   A D  +A  L  E
Sbjct: 736 VTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEE 795

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G   +V  F+ ++   CK G++ E  +LL +M+   + PNA     ++  F   G+
Sbjct: 796 MFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGK 854

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           +  A  +F  ++      +      L               L+++M++KG+ P
Sbjct: 855 LCEAHRVFAELQQKKASQSSTDRFSL---------------LFTDMINKGLIP 892


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  203 bits (517), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/370 (33%), Positives = 185/370 (50%), Gaps = 29/370 (7%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN-------------------- 49
           + V+G +PNV TYNT+ING C  G    A  +F+ M + N                    
Sbjct: 243 MEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERR 302

Query: 50  --GEFGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS 100
                GV+CK       PN VTY  +IDG C +G +DKA     +M +  I  +V TYN 
Sbjct: 303 IEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNL 362

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           LIH         EA+ +  EM ++GV+P+VV++N+ +N  C+ G   +A  L + M++  
Sbjct: 363 LIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKN 422

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           +RP    Y +L+D F    R++ AEE F      G   ++  ++ LI+G+C N  I+ A 
Sbjct: 423 IRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAF 482

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L  EM +  + PD V +NTL  G     +VE A KL DEM+  G+  D  +Y T I G 
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
            K G + +A+E+F  +  L ++  +  YN LI G  K G    A EL R +    +  D 
Sbjct: 543 SKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDD 602

Query: 341 VTYNIMIHAL 350
            TY  +I A+
Sbjct: 603 STYLYVIEAM 612



 Score =  192 bits (487), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/387 (30%), Positives = 187/387 (48%), Gaps = 41/387 (10%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           ++ T+N +IN LCR G    A +    M      +GV  KPN VTY T+I+G C  G  +
Sbjct: 216 SIVTFNIMINILCREGKWKKAKDFIGHME----VYGV--KPNVVTYNTVINGYCLRGKFE 269

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A ++F  MKD+N+ P+  TYNS I   C      EA  +  ++++ G+ PN V++N ++
Sbjct: 270 AASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALI 329

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  C  G +D+A    + M+  G+  + F YN L+    L  R+  AE++   M   G +
Sbjct: 330 DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVE 389

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL---------------- 241
            +V +Y+I INGYC+    + ALSL+ EM+ K I+P V  Y +L                
Sbjct: 390 PDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEK 449

Query: 242 ---------------FIGLFEIH----QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
                          F  L + H     ++RAF+L  EM    V  D   + T + G C+
Sbjct: 450 FKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCR 509

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
              + EA +L   ++    + D  +YN LI G  K G +K A E+F  +        ++T
Sbjct: 510 ERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLT 569

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           YN +I      G+ D A +L  +M++K
Sbjct: 570 YNALIQGYSKIGEADHAEELLREMQSK 596



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/329 (32%), Positives = 178/329 (54%), Gaps = 6/329 (1%)

Query: 41  LFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS 100
           ++EEM   N       K + VT+  +I+ LC+EG   KAK+    M+   + PNVVTYN+
Sbjct: 204 VYEEMVKMN------IKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNT 257

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           +I+G+C    +  A  +F  M D+ ++P+  ++N  ++ LCK  +++EAS +L  +++ G
Sbjct: 258 VINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESG 317

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + PNA  YN L+DG C  G +++A      M + G   +VF+Y++LI+     K IE A 
Sbjct: 318 LVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAE 377

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  EM  KG++PDVV YN    G       ++A  LFDEM    +      Y + ID  
Sbjct: 378 DMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVF 437

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
            K   + EA E F+         DI  +N LIDG C +G +  A++L + +    ++ D 
Sbjct: 438 GKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDE 497

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VT+N ++   C + K+++A+ L  +M+ +
Sbjct: 498 VTFNTLMQGYCRERKVEEAKKLLDEMKER 526



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 166/314 (52%), Gaps = 6/314 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ +  KL   G  PN  TYN LI+G C  G    A    +EM N     G+V   +  
Sbjct: 305 EASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNR----GIVA--SVF 358

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  L  E  +++A+++  +M+++ + P+VVTYN  I+G+C   +  +A  LF EM
Sbjct: 359 TYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEM 418

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ ++P V ++  +++   K  +M EA    +  I+ G+ P+  ++N L+DG C+ G +
Sbjct: 419 VEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNI 478

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA +L   M++     +  +++ L+ GYC+ +++E A  L  EM  +GIKPD + YNTL
Sbjct: 479 DRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTL 538

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A ++FDEM   G       Y   I G  K G    A EL R ++    
Sbjct: 539 ISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGI 598

Query: 302 ELDIRAYNCLIDGL 315
             D   Y  +I+ +
Sbjct: 599 TPDDSTYLYVIEAM 612



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 159/330 (48%), Gaps = 3/330 (0%)

Query: 34  HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
           HT     +F E++       V     T+ +  ++   C+    D+A E    MK+  I P
Sbjct: 124 HTTTPTVIFNELSLARNRLNV---KTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIP 180

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
              T NSL+      N    A  ++ EM+   ++ ++V+FN+++N LC+ GK  +A   +
Sbjct: 181 KTETCNSLLSLLLKLNKIKMAWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFI 240

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             M   GV+PN   YNT+++G+CL G+   A ++F +M+    K + ++Y+  I+  CK 
Sbjct: 241 GHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKE 300

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + IE A  +  ++L  G+ P+ V YN L  G      +++AF   DEM   G+ A  + Y
Sbjct: 301 RRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTY 360

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I  L     I EA ++ + +R    E D+  YN  I+G C+ G  K A  LF  +  
Sbjct: 361 NLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVE 420

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLF 363
             +   V TY  +I       +M +A + F
Sbjct: 421 KNIRPTVETYTSLIDVFGKRNRMSEAEEKF 450


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 194/379 (51%), Gaps = 50/379 (13%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPNVFTYN L+  LC+      A  L  EM+N        C P+ V+YTT+I  +C+ 
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG------CCPDAVSYTTVISSMCEV 229

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V + +EL      E   P V  YN+LI+G C  +D+  A  L  EM+++G+ PNV+S+
Sbjct: 230 GLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284

Query: 134 NVIMNELCKNGKMDEASRLLELMIQ----------------------------------- 158
           + ++N LC +G+++ A   L  M++                                   
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344

Query: 159 -IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G++PN   YNTL+ GFC  G + +A  +F  ME +GC  N+ +Y  LING+ K   ++
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           GA+ ++++ML+ G  P+VV+Y  +   L    + + A  L + M +   A     +  FI
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464

Query: 278 DGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGV 335
            GLC  G +  A ++FR + +  +   +I  YN L+DGL K+ R++ A+ L R +  RGV
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524

Query: 336 LIADVVTYNIMIHALCADG 354
             +   TYN ++H  C  G
Sbjct: 525 EWSS-STYNTLLHGSCNAG 542



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 172/356 (48%), Gaps = 14/356 (3%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           MKL+ F C  ++F   ++I+   + G    A+ +F  +     EFG  C P+   Y  ++
Sbjct: 102 MKLQGFHCSEDLFI--SVISVYRQVGLAERAVEMFYRIK----EFG--CDPSVKIYNHVL 153

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           D L  E  +     ++  MK +   PNV TYN L+   C  N  + AK L +EM ++G  
Sbjct: 154 DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+ VS+  +++ +C+ G + E   L E        P   VYN L++G C       A EL
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFEL 268

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M   G   NV SYS LIN  C + +IE A S  ++ML +G  P++   ++L  G F 
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328

Query: 248 IHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
                 A  L+++M R  G+  +  AY T + G C +G IV+AV +F  +  +    +IR
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            Y  LI+G  K G L  A  ++  +       +VV Y  M+ ALC   K  +A  L
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 177/369 (47%), Gaps = 12/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F +++ FGC+P+V  YN +++ L       +   ++ +M     E      PN  
Sbjct: 129 RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE------PNVF 182

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++  LCK   VD AK+L ++M ++   P+ V+Y ++I   C      E + L    
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL---- 238

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +  +P V  +N ++N LCK      A  L+  M++ G+ PN   Y+TL++  C +G++
Sbjct: 239 -AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
             A      M   GC  N+++ S L+ G         AL L+++M+   G++P+VV YNT
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      + +A  +F  M+  G + +   Y + I+G  K G +  AV ++  +    
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  Y  +++ LC+  + K A  L   + +      V T+N  I  LC  G++D A 
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477

Query: 361 DLFLDMEAK 369
            +F  ME +
Sbjct: 478 KVFRQMEQQ 486



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 10/342 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV +Y+TLIN LC +G   +A +   +M          C PN  T ++++ G    
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG------CHPNIYTLSSLVKGCFLR 329

Query: 74  GFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G    A +L+ +M +   + PNVV YN+L+ GFC   +  +A  +F  M + G  PN+ +
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++N   K G +D A  +   M+  G  PN  VY  +++  C   +   AE L   M 
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQV 251
              C  +V +++  I G C    ++ A  ++ +M  +    P++V YN L  GL + +++
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A+ L  E+   GV   +  Y T + G C  G    A++L   + +     D    N +
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569

Query: 312 IDGLCKSGRLKIAWELFR--SLPRGVLIADVVTYNIMIHALC 351
           I   CK G+ + A ++    S  R     DV++Y  +I  LC
Sbjct: 570 ILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/282 (28%), Positives = 138/282 (48%), Gaps = 11/282 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A ++F  +   GC PN+ TY +LING  + G    A+ ++ +M          C PN 
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG------CCPNV 422

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT +++ LC+     +A+ L   M  EN  P+V T+N+ I G C A   + A+ +F +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482

Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M  Q    PN+V++N +++ L K  +++EA  L   +   GV  ++  YNTL+ G C  G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVV 236
               A +L   M   G   +  + +++I  YCK  + E A  +  +++S G    +PDV+
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVI 601

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
            Y  +  GL   +  E    L + M   G+      +   I+
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 10/259 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ K+   GC PNV  Y  ++  LCR      A +L E M+  N      C P+  T
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN------CAPSVPT 459

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +   I GLC  G +D A+++F +M+ ++   PN+VTYN L+ G   AN   EA  L  E+
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ +  ++N +++  C  G    A +L+  M+  G  P+    N ++  +C  G+ 
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579

Query: 182 NRAEELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            RA ++   VS      + +V SY+ +I G C++   E  + L   M+S GI P +  ++
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639

Query: 240 TLFIGLFEIHQVERAFKLF 258
            L I  F +  + RA   F
Sbjct: 640 VL-INCFILDDIVRAHDQF 657



 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 5/236 (2%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           ++F V++ +L  +G++D    LL+ M   G   +  ++ +++  +   G   RA E+F  
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           ++  GC  +V  Y+ +++       I+    +Y +M   G +P+V  YN L   L + ++
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A KL  EM   G   D  +Y T I  +C+ G + E  EL       ++E  +  YN 
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVYNA 251

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LI+GLCK    K A+EL R +    +  +V++Y+ +I+ LC  G+++ A      M
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 150/362 (41%), Gaps = 71/362 (19%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           +AL+ F+ +AN N     + K   +T+  +I  L  +G VD  + L  +MK         
Sbjct: 58  LALHFFKSIANSN-----LFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK--------- 103

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
                + GF  + D      LFI ++    Q                G  + A  +   +
Sbjct: 104 -----LQGFHCSED------LFISVISVYRQV---------------GLAERAVEMFYRI 137

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            + G  P+  +YN ++D      R+     ++  M+  G + NVF+Y++L+   CKN ++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197

Query: 217 EGALSLYSEMLSKGIKPDVV------------------------------IYNTLFIGLF 246
           +GA  L  EM +KG  PD V                              +YN L  GL 
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLC 257

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           + H  + AF+L  EM   G++ +  +Y T I+ LC +G I  A      +       +I 
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARDLFLD 365
             + L+ G    G    A +L+  + RG  L  +VV YN ++   C+ G + KA  +F  
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377

Query: 366 ME 367
           ME
Sbjct: 378 ME 379



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 61/120 (50%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           QV+    L  +M+  G       + + I    + G    AVE+F  ++    +  ++ YN
Sbjct: 91  QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 150

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ++D L    R+++ + ++R + R     +V TYN+++ ALC + K+D A+ L ++M  K
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 189/370 (51%), Gaps = 13/370 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F  +    C P+ +TY TL++GLC+      A+ L +EM +        C P+ V
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG------CSPSPV 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +IDGLCK+G + +  +L   M  +   PN VTYN+LIHG C     ++A  L   M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN V++  ++N L K  +  +A RLL  M + G   N  +Y+ L+ G    G+ 
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   GCK N+  YS+L++G C+  +   A  + + M++ G  P+   Y++L
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+    E A +++ EM + G + + + Y   IDGLC  G + EA+ ++  +  +  
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-----PRGVLIADVVTYNIMIHALCADGKM 356
           + D  AY+ +I GLC  G +  A +L+  +     P+     DVVTYNI++  LC    +
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVTYNILLDGLCMQKDI 556

Query: 357 DKARDLFLDM 366
            +A DL   M
Sbjct: 557 SRAVDLLNSM 566



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 129/419 (30%), Positives = 196/419 (46%), Gaps = 65/419 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +++  GC P+   YN LI+GLC+ G       L + M      F   C PN V
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM------FLKGCVPNEV 293

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC---YAND-------- 110
           TY T+I GLC +G +DKA  L  +M      PN VTY +LI+G      A D        
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353

Query: 111 ------------------------WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                                     EA  L+ +M ++G +PN+V ++V+++ LC+ GK 
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           +EA  +L  MI  G  PNA+ Y++LM GF  TG    A +++  M+  GC  N F YS+L
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM---QR 263
           I+G C    ++ A+ ++S+ML+ GIKPD V Y+++  GL  I  ++ A KL+ EM   + 
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL------CK 317
                D   Y   +DGLC    I  AV+L  ++     + D+   N  ++ L      C 
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593

Query: 318 SGRLKIAWELFRSLPR---------------GVLIADVVTYNIMIHALCADGKMDKARD 361
            GR  +   + R L R                 L     T+ +++  +C   K++ A D
Sbjct: 594 KGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 188/390 (48%), Gaps = 39/390 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F C+ +V ++N+++N +   G     L  ++ + N N    +   PN +++  +I  LCK
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNGLSFNLVIKALCK 199

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
             FVD+A E+F  M +    P+  TY +L+ G C     +EA  L  EM  +G  P+ V 
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +NV+++ LCK G +   ++L++ M   G  PN   YNTL+ G CL G++++A  L   M 
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S  C  N  +Y  LING  K +    A+ L S M  +G   +  IY+ L  GLF+  + E
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL-------------------- 292
            A  L+ +M   G   +   Y   +DGLC+ G   EA E+                    
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439

Query: 293 ---FRT------LRILKYELDIRA-------YNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
              F+T      +++ K E+D          Y+ LIDGLC  GR+K A  ++  +    +
Sbjct: 440 KGFFKTGLCEEAVQVWK-EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
             D V Y+ +I  LC  G MD A  L+ +M
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 167/334 (50%), Gaps = 9/334 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN----P 93
           A++LF  M +   EF   CK +  ++ ++++ +  EG   +  E +  + + N+N    P
Sbjct: 131 AVDLFHRMVD---EFR--CKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N +++N +I   C     + A  +F  M ++   P+  ++  +M+ LCK  ++DEA  LL
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G  P+  +YN L+DG C  G + R  +L  +M   GC  N  +Y+ LI+G C  
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +++ A+SL   M+S    P+ V Y TL  GL +  +   A +L   M+  G   +   Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I GL K G   EA+ L+R +     + +I  Y+ L+DGLC+ G+   A E+   +  
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              + +  TY+ ++      G  ++A  ++ +M+
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 5/312 (1%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNS----LIHGFCYANDWNEAKC 116
           ++  +     K    DKA +LF +M DE     +V ++NS    +I+   Y         
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +    M+  + PN +SFN+++  LCK   +D A  +   M +    P+ + Y TLMDG C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R++ A  L   M+S GC  +   Y++LI+G CK  ++     L   M  KG  P+ V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YNTL  GL    ++++A  L + M       +   Y T I+GL K     +AV L  ++
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               Y L+   Y+ LI GL K G+ + A  L+R +       ++V Y++++  LC +GK 
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413

Query: 357 DKARDLFLDMEA 368
           ++A+++   M A
Sbjct: 414 NEAKEILNRMIA 425



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/316 (28%), Positives = 146/316 (46%), Gaps = 11/316 (3%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI---HGFCYANDWNEAKCLF 118
           T +++I+     G  D  ++L  +++ EN    V+   S I     +  A+  ++A  LF
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLEN---RVIIERSFIVVFRAYGKAHLPDKAVDLF 135

Query: 119 IEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ----IGVRPNAFVYNTLMD 173
             M+D+   + +V SFN ++N +   G         + ++     + + PN   +N ++ 
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C    V+RA E+F  M    C  + ++Y  L++G CK + I+ A+ L  EM S+G  P
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
             VIYN L  GL +   + R  KL D M   G   +   Y T I GLC  G + +AV L 
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +   K   +   Y  LI+GL K  R   A  L  S+       +   Y+++I  L  +
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375

Query: 354 GKMDKARDLFLDMEAK 369
           GK ++A  L+  M  K
Sbjct: 376 GKAEEAMSLWRKMAEK 391



 Score = 41.6 bits (96), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 14/196 (7%)

Query: 184 AEELFVSMESMGC-KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +E++F S   MG  K    + S +I  Y  + + +       ++LS+    + VI    F
Sbjct: 60  SEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSV----EKLLSRIRLENRVIIERSF 115

Query: 243 IGLF----EIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           I +F    + H  ++A  LF  M           ++ + ++ +   G     +E +  + 
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175

Query: 298 ILKYELDIR----AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
                ++I     ++N +I  LCK   +  A E+FR +P    + D  TY  ++  LC +
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235

Query: 354 GKMDKARDLFLDMEAK 369
            ++D+A  L  +M+++
Sbjct: 236 ERIDEAVLLLDEMQSE 251


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 181/339 (53%), Gaps = 12/339 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+ +T+N+LI G CRT    VA +LF++M   G  +       + V+Y T+I+GLC+
Sbjct: 183 GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ-------DVVSYATLIEGLCE 235

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D+A ELF +M      P++  Y +L+ G C A    E   +   M + G +P+  +
Sbjct: 236 AGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRA 291

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  C+  K  EA  +L+ M + G+ P       +++ +C  GR++ A  +   M+
Sbjct: 292 YAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 351

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GCK NV++Y+ L+ G+C   ++  A++L ++M + G+ PD V YN L  G      +E
Sbjct: 352 LRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIE 411

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF+L   M+  G+ AD + Y   I+ LCK+G   +A  LF +L     + +   +N LI
Sbjct: 412 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 471

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           +GLCKSG+  IAW+    +       D  TY+  I  LC
Sbjct: 472 NGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 510



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 162/349 (46%), Gaps = 6/349 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G  P V T   +IN  C+ G    AL + E M          CKPN  
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG------CKPNVW 360

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G C EG V KA  L  KM+   +NP+ VTYN LI G C       A  L   M
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 420

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  +  ++N ++N LCK+G+ D+A  L + +   G++PNA  +N+L++G C +G+ 
Sbjct: 421 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +    M S GC  + ++YS  I   CK K  +  LS   EML K +KP  V Y  +
Sbjct: 481 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 540

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +        + + EM   G   D   Y T +   C  G + EA  +   +     
Sbjct: 541 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 600

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +D  AYN L+DG    G+   A  + + +     + +  TY I++  L
Sbjct: 601 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 649



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 23/367 (6%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           +TYN LIN LC+ G T  A +LF+ +           KPN VT+ ++I+GLCK G  D A
Sbjct: 430 YTYNALINALCKDGRTDQACSLFDSLETRG------IKPNAVTFNSLINGLCKSGKADIA 483

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            +   KM      P+  TY+S I   C      E      EM+ + V+P+ V++ +++++
Sbjct: 484 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 543

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L K       +R    M+  G  P+   Y T M  +C+ GR+N AE + + M   G   +
Sbjct: 544 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 603

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE------- 252
             +Y+ L++G+    + + A+S+  +M S    P+   Y  L   L  +  VE       
Sbjct: 604 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 663

Query: 253 ----------RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                       F LFD M+++    ++  Y + ++G  ++G   EA  L   ++     
Sbjct: 664 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 723

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           L+   Y  L+   CKS R   AW L  S+ +   I  +++Y  ++  L  +G+ DKA+++
Sbjct: 724 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEI 783

Query: 363 FLDMEAK 369
           F++   K
Sbjct: 784 FMNSRWK 790



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 173/373 (46%), Gaps = 15/373 (4%)

Query: 3   AAALFMKLRVFGCEPNVF------TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC 56
           A AL + LR+    P          + +L+  L R     +AL LF  M           
Sbjct: 95  AVALPVVLRLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPP----- 149

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            P   TY  +I  LC+   + +A      M      P+  T+NSLI G+C  N  + A+ 
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF +M  +G   +VVS+  ++  LC+ G++DEA  L   M Q    P+  +Y  L+ G C
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLC 265

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R      +   M+ +G + +  +Y+ +++  C+ ++ + A  +  EM  KG+ P VV
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
               +     +  ++  A ++ + M+  G   + W Y   + G C  G + +A+ L   +
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R      D   YN LI G C  G ++ A+ L R +    LIAD  TYN +I+ALC DG+ 
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 445

Query: 357 DKARDLFLDMEAK 369
           D+A  LF  +E +
Sbjct: 446 DQACSLFDSLETR 458



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 166/401 (41%), Gaps = 58/401 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF  L   G +PN  T+N+LINGLC++G   +A    E+M +        C P+T 
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAG------CTPDTY 500

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++ I+ LCK     +      +M  +++ P+ V Y  +IH      ++      + EM
Sbjct: 501 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 560

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++   M   C  G+++EA  +L  M + GV  +   YNTLMDG    G+ 
Sbjct: 561 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 620

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--------- 232
           + A  +   M S+    N F+Y IL+    + + +E  L L    + K I+         
Sbjct: 621 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 680

Query: 233 --------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQ---------------------- 262
                   P+   Y+++  G  E  + E A  L   M+                      
Sbjct: 681 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 740

Query: 263 -------------RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
                        +HG      +Y+  + GL   G   +A E+F   R   Y  D   + 
Sbjct: 741 RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWK 800

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +IDGL K G   I+ E+   L R        TY ++   L
Sbjct: 801 VIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 841



 Score = 42.4 bits (98), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L   +   G  P + +Y  L++GL   G T  A  +F  M +   ++     P+ 
Sbjct: 743 LDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIF--MNSRWKDYS----PDE 796

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
           + +  IIDGL K+G  D ++E+ + ++  N  P+  TY  L
Sbjct: 797 IVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 837


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/358 (35%), Positives = 190/358 (53%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF+ ++  GCEPNV+TY  LI+GLC +G   VA+ LF  M+  +G F     PNTV
Sbjct: 508 DAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSR-DGVF-----PNTV 561

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+ L +   +  A  +   M    +  N+VTYN +I G+C   D  +A  +   M
Sbjct: 562 TYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNM 621

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   N+V++N I+   C +G    A R+L+LM   G +P+ + Y  L+ GFC   ++
Sbjct: 622 LQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKM 681

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  M   G   N  +Y+ LI+GYCK+++++ A SL   M   G +P+V  YN L
Sbjct: 682 ESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVL 741

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + +    A +L   M   G+  +   Y   IDGLCKNG    A+E+F  +     
Sbjct: 742 IHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGC 801

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y+ LI  L + G+++ A  LF  L R  LI D +TY  MI A    GK++ A
Sbjct: 802 LPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHA 859



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/365 (34%), Positives = 182/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   GCEPN  TY+TLINGLC +G    A +L  EM       G++  P   
Sbjct: 438 SALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI----LHGIL--PTAH 491

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T T  I  LC  G  + A  LF+ MK++   PNV TY +LI G C +     A  LF  M
Sbjct: 492 TCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRM 551

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN V++N ++N L +N ++  A  +L LM + G+  N   YN ++ G+C+ G  
Sbjct: 552 SRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDP 611

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +  +M   G   N+ +Y+ +I GYC +     AL +   M   G KPD   Y  L
Sbjct: 612 KKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTEL 671

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +I ++E AF LF+EM   G+  +   Y   IDG CK+  +  A  L   ++    
Sbjct: 672 ICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGC 731

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +++ YN LI GL K      A EL + +    +  +VVTY  MI  LC +G    A +
Sbjct: 732 RPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALE 791

Query: 362 LFLDM 366
           +F  M
Sbjct: 792 MFNKM 796



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 180/353 (50%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G    +F Y+ L+  L R G T   ++ +  M +     GV  +PN + Y  +I+ LCK+
Sbjct: 345 GLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSE----GV--QPNLLIYNAVINALCKD 398

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ +  K+ +  ++P+  TY S+I G C  +D + A  +F +M  +G +PN V++
Sbjct: 399 GNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTY 458

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++N LC +G+++EA  L+  MI  G+ P A      +   C  G    A  LFV M++
Sbjct: 459 STLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKN 518

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ NV++Y+ LI+G C +  ++ A+ L+  M   G+ P+ V YN L   L E  +++ 
Sbjct: 519 KGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKY 578

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF + + M R+G+  +   Y   I G C  G   +A+ +   +    +  ++  YN +I 
Sbjct: 579 AFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIK 638

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C SG    A  +   +  G    D  +Y  +I   C   KM+ A  LF +M
Sbjct: 639 GYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/342 (32%), Positives = 159/342 (46%), Gaps = 29/342 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLC---RTGHTIVALNL------------FEEMAN 47
           A  LF ++   G  PN  TYN LIN L    R  +  V LNL            + EM  
Sbjct: 544 AIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIK 603

Query: 48  GNGEFGVVCKP--------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
           G    G   K               N VTY TII G C  G    A  +   M+D    P
Sbjct: 604 GYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKP 663

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           +  +Y  LI GFC  +    A  LF EM+D G+ PN V++  +++  CK+ K+D A+ LL
Sbjct: 664 DEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLL 723

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           E M + G RPN   YN L+ G       + AEEL   M   G   NV +Y+ +I+G CKN
Sbjct: 724 EHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKN 783

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
                AL ++++M+ +G  P+++ Y++L   L +  +VE A  LF E++RHG+  D   Y
Sbjct: 784 GSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITY 843

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
              I+    +G +  A      +     +  +  Y  LI GL
Sbjct: 844 VKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 885



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 177/419 (42%), Gaps = 65/419 (15%)

Query: 10   LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
            +R  GC+P+ ++Y  LI G C+      A  LF EM +       +C PN VTYT +IDG
Sbjct: 656  MRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDG-----LC-PNEVTYTALIDG 709

Query: 70   LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
             CK+  +D A  L   MK     PNV TYN LIHG    N+++ A+ L   M+++G+ PN
Sbjct: 710  YCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPN 769

Query: 130  VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            VV++  +++ LCKNG    A  +   MI+ G  PN   Y++L+      G+V  AE LF 
Sbjct: 770  VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 829

Query: 190  SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS--------------KGIK--- 232
             +E  G   +  +Y  +I  Y  + ++E A +    M+               KG+K   
Sbjct: 830  ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 889

Query: 233  ----------PDVV--------------------------------IYNTLFIGLFEIHQ 250
                      PDVV                                + N L   L    +
Sbjct: 890  LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 949

Query: 251  VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
               A +L   M   G+  D  AY + +  L +   +  A+ +F+ +     E+ +  Y  
Sbjct: 950  WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 1009

Query: 311  LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LI  LC+  R K A   F ++       D V   ++I  L  DG  D   +    ME +
Sbjct: 1010 LICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETR 1068



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 106 CYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           C++ +       F++M+ Q G++  + +++ ++  L + G           M+  GV+PN
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN +++  C  G V  AE +   +       + F+Y+ +I G+C+  +++ AL +++
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G +P+ V Y+TL  GL +  +V  AF L  EM  HG+          I  LC  G
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 504

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              +A  LF  ++    E ++  Y  LI GLC SG LK+A  LF  + R  +  + VTYN
Sbjct: 505 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 564

Query: 345 IMIHALCADGKMDKA 359
            +I+ L  + ++  A
Sbjct: 565 ALINILVENRRIKYA 579



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 139/322 (43%), Gaps = 30/322 (9%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  PNV TY  +I+GLC+ G T +AL +F +M          C PN +TY+++I  L +E
Sbjct: 765  GIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQG------CLPNLLTYSSLIRALGQE 818

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            G V++A+ LF +++   + P+ +TY  +I  +  +     A      M+  G QP + ++
Sbjct: 819  GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 878

Query: 134  NVIMNEL--------------------CKNG----KMDEASRLLELMIQIGVRPNAFVYN 169
             V++  L                    C  G      D  S +   + ++    +  V N
Sbjct: 879  GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQN 938

Query: 170  TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
             L+      GR   A EL  SM S G   +  +Y+ L+    + + ++ A+ ++  M ++
Sbjct: 939  ALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 998

Query: 230  GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            G +  +  Y  L   L ++H+ + A   F+ M       D       IDGL ++GY    
Sbjct: 999  GCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLC 1058

Query: 290  VELFRTLRILKYELDIRAYNCL 311
            +E    +   +Y      Y  L
Sbjct: 1059 MEFLHIMETRRYMPSFHIYTIL 1080



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 93/183 (50%), Gaps = 1/183 (0%)

Query: 188 FVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           F+ M S  G +  +F+YS L+    +       +  Y  MLS+G++P+++IYN +   L 
Sbjct: 337 FLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALC 396

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +   V  A  +  ++    ++ DT+ Y + I G C+   +  A+++F  +     E +  
Sbjct: 397 KDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTV 456

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y+ LI+GLC SGR+  A++L R +    ++    T    I ALC  G  + A  LF+DM
Sbjct: 457 TYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDM 516

Query: 367 EAK 369
           + K
Sbjct: 517 KNK 519



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 1/157 (0%)

Query: 211 CKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           C +KE       + +MLS+ G++  +  Y+ L I L  +         +  M   GV  +
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   I+ LCK+G + +A  + + +   +   D   Y  +I G C+   L  A ++F 
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +     + VTY+ +I+ LC  G++++A DL  +M
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREM 481



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 49/223 (21%), Positives = 82/223 (36%), Gaps = 26/223 (11%)

Query: 14   GCEPNVFTYNTLINGL--------------------CRTGHTIVALNLFEEMANGNGEFG 53
            GC+P ++TY  LI GL                    C  G+     +    M+    E  
Sbjct: 870  GCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAEL- 928

Query: 54   VVCKP--NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
                P  +      ++  L   G   +A EL   M  + + P+   YNSL+       + 
Sbjct: 929  ---DPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNV 985

Query: 112  NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            + A  +F  M  QG + ++  +  ++  LC+  +  EA    E M+     P+  V   L
Sbjct: 986  DLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVL 1045

Query: 172  MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            +DG    G  +   E    ME+     +   Y+IL     K +
Sbjct: 1046 IDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKKR 1088


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 195/403 (48%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++     +PNV  Y  LI+G  R G+   A  + +EM           +PN +
Sbjct: 205 EAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG------VQPNKI 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLCK G +D+A  L  +M  ++  P+ +TYN +I G    ++  +A  L  EM
Sbjct: 259 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEM 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL---- 177
            + G+ PNV +++++++ LC++G+ ++AS LLE M   G++PNAFVY  L+ G+C     
Sbjct: 319 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 378

Query: 178 -------------------------------TGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                           GRV  + + F  M+  G   N F+YS L
Sbjct: 379 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 438

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GY KN ++E A  L   ML  G+KP+ VIY  L    F+   +E+    F  M   GV
Sbjct: 439 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 498

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y   I  L  +G +  A  +   +       D+  Y+ LI GLCK+   + A+ 
Sbjct: 499 MLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFG 558

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +   + +  +  ++V YN +I  LC  G +  AR++F  + AK
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 601



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 194/369 (52%), Gaps = 10/369 (2%)

Query: 2   EAAALFMKLRVF----GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           +A AL  K+R F    G  P+V+TY+TLI   C+      A  +  EM     E G  C 
Sbjct: 96  DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR----ERG--CG 149

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            NTVTY  +I GLC+ G V++A      M+D  + P+  TY +LI+G C +   NEAK L
Sbjct: 150 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 209

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM    ++PNVV +  +++   + G  DEA ++++ M+  GV+PN   Y+ L+ G C 
Sbjct: 210 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 269

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+++RA  L   M     + +  +Y+++I G+ ++   + A  L SEM + GI P+V  
Sbjct: 270 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYT 329

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+ +  GL +  + E+A  L +EM   G+  + + Y   I G C+ G +  A E+F  + 
Sbjct: 330 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 389

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +    D+  YN LI GL K GR++ + + F  +    L+ +  TY+ +IH    +G ++
Sbjct: 390 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 449

Query: 358 KARDLFLDM 366
            A  L   M
Sbjct: 450 SAEQLVQRM 458



 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV+TY+ +I+GLC++G    A +L EEM           KPN  
Sbjct: 310 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAF 363

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C+EG V  A E+F KM   N+ P++  YNSLI G        E+   F +M
Sbjct: 364 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 423

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN  +++ +++   KNG ++ A +L++ M+  G++PN  +Y  L++ +  +  +
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +    F SM   G   +   Y ILI+    +  +E A  + SE+   G  PDV +Y++L
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSL 543

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +    E+AF + DEM + GV  +   Y   IDGLCK+G I  A  +F ++     
Sbjct: 544 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 603

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   Y  LIDG CK G +  A+ L+  +    +  D   Y+++     + G +++A  
Sbjct: 604 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 663

Query: 362 LFLDM 366
           L  +M
Sbjct: 664 LIEEM 668



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA + + +R  G  P++   N L+  L R     +   + E M       G    P+  
Sbjct: 65  DAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMV------GAGISPDVY 118

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+I+  CK    D AK++ ++M++     N VTYN LI G C +    EA     +M
Sbjct: 119 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 178

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+  ++  ++N LCK+ + +EA  LL+ M    ++PN  VY  L+DGF   G  
Sbjct: 179 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 238

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M + G + N  +Y  L+ G CK  +++ A  L  +M+    +PD + YN +
Sbjct: 239 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 298

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F  H  + AF+L  EM+  G++ + + Y   I GLC++G   +A +L   +     
Sbjct: 299 IEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 358

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +   Y  LI G C+ G + +A E+F  + +  ++ D+  YN +I  L   G+++++  
Sbjct: 359 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 418

Query: 362 LFLDMEAK 369
            F  M+ +
Sbjct: 419 YFAQMQER 426



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 197/403 (48%), Gaps = 42/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ L  ++   G +PN F Y  LI+G CR G+  +A  +F++M   N        P+  
Sbjct: 345 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN------VLPDLY 398

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y ++I GL K G V+++ + F +M++  + PN  TY+ LIHG+    D   A+ L   M
Sbjct: 399 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 458

Query: 122 MDQGVQPNVVSF-----------------------------------NVIMNELCKNGKM 146
           +D G++PN V +                                    ++++ L  +G M
Sbjct: 459 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 518

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           + A R+L  + + G  P+  VY++L+ G C T    +A  +   M   G   N+  Y+ L
Sbjct: 519 EAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 578

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK+ +I  A ++++ +L+KG+ P+ V Y +L  G  ++  +  AF L++EM   G+
Sbjct: 579 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 638

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D + Y     G    G + +A+ L   +  L+    I ++N L+DG CK G+++   +
Sbjct: 639 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETLK 697

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   +    L+ + +T   +I  L   GK+ +   +F++++ K
Sbjct: 698 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 146/304 (48%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++D   K G V  A E+ L M+D  + P++   N+L+     A+       +   M+  G
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+V +++ ++   CK  + D A ++L  M + G   N   YN L+ G C +G V  A 
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
                ME  G   + F+Y  LING CK++    A +L  EM    +KP+VV+Y  L  G 
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                 + AFK+  EM   GV  +   Y   + GLCK G +  A  L + +    +  D 
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I+G  +    K A+ L   +    +  +V TY+IMIH LC  G+ +KA DL  +
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 366 MEAK 369
           M  K
Sbjct: 353 MTTK 356



 Score =  131 bits (329), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 168/344 (48%), Gaps = 34/344 (9%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y  LI+ L  +G+   A  +  E+   NG       P+   Y+++I GLCK    +KA  
Sbjct: 505 YGILIHNLSSSGNMEAAFRVLSEIEK-NGSV-----PDVHVYSSLISGLCKTADREKAFG 558

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +  +M  + ++PN+V YN+LI G C + D + A+ +F  ++ +G+ PN V++  +++  C
Sbjct: 559 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 618

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA----EELFVSMESMGCK 197
           K G +  A  L   M+  G+ P+AFVY+ L  G    G + +A    EE+F+   +    
Sbjct: 619 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA---- 674

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ S++ L++G+CK  +++  L L   ++ +G+ P+ +    +  GL E  ++     +
Sbjct: 675 -SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 733

Query: 258 FDEMQRHGVAADTWAYRT-FIDGL-----------------CKNGYIVEAVELFRTLRIL 299
           F E+Q+    +    + + F+D +                 CK G + +A+ L   +   
Sbjct: 734 FVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAK 793

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVT 342
              +   +Y  ++D LC+ G+L  A  L + +  RG L   +V 
Sbjct: 794 SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 837



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 120/297 (40%), Gaps = 53/297 (17%)

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C  + +N A  L I+M+     P VV    I   L  +G    A               
Sbjct: 5   MCAGSLFNLANGLLIKMIRAYPSPPVV-LASIHRALSDSGHRSPA--------------- 48

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSME-------------------------------- 192
             V + L+D +  +GRV  A E+ + M                                 
Sbjct: 49  --VLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVRE 106

Query: 193 ---SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
                G   +V++YS LI  YCK +E + A  +  EM  +G   + V YN L  GL    
Sbjct: 107 FMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSG 166

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            VE AF    +M+ +G+  D + Y   I+GLCK+    EA  L   +   + + ++  Y 
Sbjct: 167 AVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYA 226

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LIDG  + G    A+++ + +    +  + +TY+ ++  LC  G+MD+A  L   M
Sbjct: 227 NLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 29/210 (13%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYT 64
           L+ ++   G  P+ F Y+ L  G    G    A+ L EEM   G+            ++ 
Sbjct: 629 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS--------SFN 680

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE---- 120
            ++DG CK G + +  +L   +    + PN +T  ++I G   A   +E   +F+E    
Sbjct: 681 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 740

Query: 121 ---------------MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
                          M++QG  P  V  ++I +  CK G +D+A  L ++++        
Sbjct: 741 TSESAARHFSSLFMDMINQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGC 799

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
             Y  ++D  C  G+++ A  L   M+  G
Sbjct: 800 SSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/364 (33%), Positives = 190/364 (52%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G  PNV+T+   I  L R G    A  +F  M +        C P+ VTYT 
Sbjct: 249 LLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEG------CGPDLVTYTV 302

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +ID LC  G ++ AKELF+KMK     P+ V Y +L+  F    D +  K  + +M   G
Sbjct: 303 LIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADG 362

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+VV+F ++++ LCK    DEA    ++M + G+ PN   YNTL+ G    GR+  A 
Sbjct: 363 YMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDAL 422

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L  +MES+G +   ++Y   I+ + K+ E   A+  + +M +KGI P++V  N     L
Sbjct: 423 KLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSL 482

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            E+ ++  A  +F+ ++ +G+A D+  Y   +    K G + EAV L   +     E D+
Sbjct: 483 AEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDV 542

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
              N LID L K+GR+  AW++F  +    L   VVTYN ++  L  +G++ KA +LF  
Sbjct: 543 IVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFES 602

Query: 366 MEAK 369
           M  K
Sbjct: 603 MIXK 606



 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/394 (29%), Positives = 209/394 (53%), Gaps = 43/394 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +F ++   GC P++ TY  LI+ LC  G    A  LF +M ANG+       KP+ 
Sbjct: 280 EAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGH-------KPDQ 332

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T++D     G +D  KE + +M+ +   P+VVT+  L+   C A D++EA   F  
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  QG+ PN+ ++N ++  L + G++++A +LL+ M  +GV+P A+ Y T +D F  +G 
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452

Query: 181 VNRAEELFVSMESMG-------CKHNVFS----------------------------YSI 205
             +A E F  M++ G       C  +++S                            Y++
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++  Y K  +++ A++L SEM+  G +PDV++ N+L   L++  +V+ A+++FD M+   
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           ++     Y T + GL K G + +A+ELF ++   K   +  ++N L+D  CK+  +++A 
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELAL 632

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++F  +       DV+TYN +I+ L  + K++ A
Sbjct: 633 KMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHA 666



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 187/358 (52%), Gaps = 6/358 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+R  G   N ++YN LI+ L ++G    AL ++  M +         KP+  TY+ ++ 
Sbjct: 182 KMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEG------LKPSLKTYSALMV 235

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            L K+   +    L  +M+D  + PNV T+   I     A   +EA  +F  M D+G  P
Sbjct: 236 ALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           ++V++ V+++ LC  G+++ A  L   M   G +P+  +Y TL+D F   G ++  +E +
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ME+ G   +V +++IL++  CK ++ + A + +  M  +GI P++  YNTL  GL   
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++E A KL D M+  GV    + Y TFID   K+G   +AVE F  ++      +I A 
Sbjct: 416 GRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           N  +  L + GRL+ A  +F  L    L  D VTYN+M+      G++D+A +L  +M
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 149/278 (53%), Gaps = 6/278 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  LF  ++  GC P+ FT+N L+    ++G       L++EM +        CKP+ +
Sbjct: 806  KAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR------CKPDAI 859

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY  +I  L K   +DKA + F  +   +  P   TY  LI G        EA  LF EM
Sbjct: 860  TYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEM 919

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             D G +PN   FN+++N   K G  + A +L + M+  G+RP+   Y  L+D  CL GRV
Sbjct: 920  SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRV 979

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            + A   F  ++S G   +  +Y+ +ING  K++ +E AL+LY+EM ++GI PD+  YN+L
Sbjct: 980  DEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             + L     VE+A ++++E+Q  G+  D + Y   I G
Sbjct: 1040 MLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRG 1077



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 169/321 (52%), Gaps = 6/321 (1%)

Query: 11   RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
            +  G  P + +YN LI  L    +T  A +LF++M N      V C P+  T+  ++   
Sbjct: 780  KKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKN------VGCAPDAFTFNMLLAVH 833

Query: 71   CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
             K G + +  EL+ +M      P+ +TYN +I     +N+ ++A   F +++    +P  
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 131  VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
             ++  +++ L K G+++EA RL E M   G +PN  ++N L++G+   G    A +LF  
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 191  MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
            M + G + ++ SY+IL++  C    ++ AL  ++E+ S G+ PD + YN +  GL +  +
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 251  VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
            +E A  L++EM+  G+  D + Y + +  L   G + +A  ++  L++   E D+  YN 
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 311  LIDGLCKSGRLKIAWELFRSL 331
            LI G   S   + A+ +++++
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNM 1094



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 166/342 (48%), Gaps = 5/342 (1%)

Query: 25   LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
            L+  LC+    + A  +F++     G       P   +Y  +I  L +  + +KA +LF 
Sbjct: 758  LVRVLCKHKRELYAYQIFDKFTKKLG-----ISPTLASYNCLIGELLEVHYTEKAWDLFK 812

Query: 85   KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
             MK+    P+  T+N L+     +    E   L+ EM+ +  +P+ +++N++++ L K+ 
Sbjct: 813  DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSN 872

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             +D+A      ++    RP    Y  L+DG    GR+  A  LF  M   GCK N   ++
Sbjct: 873  NLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 205  ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            ILINGY K  + E A  L+  M+++GI+PD+  Y  L   L    +V+ A   F+E++  
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 265  GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            G+  D  AY   I+GL K+  + EA+ L+  +R      D+  YN L+  L  +G ++ A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 325  WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              ++  L    L  DV TYN +I         + A  ++ +M
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 187/404 (46%), Gaps = 44/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +    C PN  ++NTL++  C+     +AL +F +M   +      CKP+ +
Sbjct: 595 KAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMD------CKPDVL 648

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GL KE  V+ A   F ++K ++++P+ VT  +L+ G        +A  +  + 
Sbjct: 649 TYNTVIYGLIKENKVNHAFWFFHQLK-KSMHPDHVTICTLLPGLVKCGQIGDAISIARDF 707

Query: 122 MDQG-----------------VQPNVVSFNVIMNELCKNGKMDEASRLLELM-------- 156
           M Q                  V+  +    +   EL  NG   E S L+ L+        
Sbjct: 708 MYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKR 767

Query: 157 ------------IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
                        ++G+ P    YN L+          +A +LF  M+++GC  + F+++
Sbjct: 768 ELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFN 827

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +L+  + K+ +I     LY EM+S+  KPD + YN +   L + + +++A   F ++   
Sbjct: 828 MLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS 887

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
                   Y   IDGL K G + EA+ LF  +     + +   +N LI+G  K G  + A
Sbjct: 888 DFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +LF+ +    +  D+ +Y I++  LC  G++D+A   F ++++
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 107/430 (24%), Positives = 189/430 (43%), Gaps = 65/430 (15%)

Query: 3    AAALFMKLRVFGCEPNVFTYNT----------------------------------LING 28
            A  +F K+ V  C+P+V TYNT                                  L+ G
Sbjct: 631  ALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPG 690

Query: 29   LCRTGHTIVALNL----------------FEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            L + G    A+++                +E++  G      + K        +++G+C+
Sbjct: 691  LVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICR 750

Query: 73   E-GFVDKAKELFLKMKDE--------------NINPNVVTYNSLIHGFCYANDWNEAKCL 117
            E  F+     +  K K E               I+P + +YN LI      +   +A  L
Sbjct: 751  EDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDL 810

Query: 118  FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            F +M + G  P+  +FN+++    K+GK+ E   L + MI    +P+A  YN ++     
Sbjct: 811  FKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAK 870

Query: 178  TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            +  +++A + F  + S   +    +Y  LI+G  K   +E A+ L+ EM   G KP+  I
Sbjct: 871  SNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAI 930

Query: 238  YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            +N L  G  +I   E A +LF  M   G+  D  +Y   +D LC  G + EA+  F  L+
Sbjct: 931  FNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELK 990

Query: 298  ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                + D  AYN +I+GL KS R++ A  L+  +    ++ D+ TYN ++  L   G ++
Sbjct: 991  STGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVE 1050

Query: 358  KARDLFLDME 367
            +A+ ++ +++
Sbjct: 1051 QAKRMYEELQ 1060



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 129/240 (53%), Gaps = 6/240 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A   F  L      P   TY  LI+GL + G    A+ LFEEM+    ++G  CKPN  
Sbjct: 876  KALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMS----DYG--CKPNCA 929

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             +  +I+G  K G  + A +LF +M +E I P++ +Y  L+   C A   +EA   F E+
Sbjct: 930  IFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNEL 989

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               G+ P+ +++N I+N L K+ +M+EA  L   M   G+ P+ + YN+LM    L G V
Sbjct: 990  KSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMV 1049

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             +A+ ++  ++  G + +VF+Y+ LI GY  ++  E A ++Y  M+  G  P++  Y  L
Sbjct: 1050 EQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 150/313 (47%), Gaps = 10/313 (3%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH-----GFCYANDWNEAKC 116
           TY TI   L   G + +   +  KM+      N  +YN LIH     GFC      EA  
Sbjct: 159 TYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFC-----GEALE 213

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           ++  M+ +G++P++ +++ +M  L K    +    LL+ M  +G+RPN + +   +    
Sbjct: 214 VYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLG 273

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G+++ A E+F  M+  GC  ++ +Y++LI+  C   ++E A  L+ +M + G KPD V
Sbjct: 274 RAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQV 333

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           IY TL     +   ++   + + +M+  G   D   +   +D LCK     EA   F  +
Sbjct: 334 IYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVM 393

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R      ++  YN LI GL ++GR++ A +L  ++    +     TY   I      G+ 
Sbjct: 394 RKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGET 453

Query: 357 DKARDLFLDMEAK 369
            KA + F  M+AK
Sbjct: 454 GKAVETFEKMKAK 466



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 114/207 (55%), Gaps = 6/207 (2%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  LF ++  +GC+PN   +N LING  + G T  A  LF+ M N         +P+  
Sbjct: 911  EAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG------IRPDLK 964

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +YT ++D LC  G VD+A   F ++K   ++P+ + YN +I+G   +    EA  L+ EM
Sbjct: 965  SYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEM 1024

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             ++G+ P++ ++N +M  L   G +++A R+ E +   G+ P+ F YN L+ G+ L+   
Sbjct: 1025 RNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENP 1084

Query: 182  NRAEELFVSMESMGCKHNVFSYSILIN 208
              A  ++ +M   GC  N+ +Y+ L N
Sbjct: 1085 EHAYTVYKNMMVDGCNPNIGTYAQLPN 1111



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + ++ ++ ++  I   L   G + + + +L  M + G   NA+ YN L+     +G 
Sbjct: 148 MQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGF 207

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A E++  M S G K ++ +YS L+    K ++ E  + L  EM   G++P+V  +  
Sbjct: 208 CGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTI 267

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               L    +++ A+++F  M   G   D   Y   ID LC  G +  A ELF  ++   
Sbjct: 268 CIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANG 327

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++ D   Y  L+D     G L    E +  +     + DVVT+ I++  LC     D+A
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEA 386



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 110/235 (46%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  L  + K+++ + + E M +  +R +   Y T+     + G + +   +   M  
Sbjct: 126 NFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRK 185

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N +SY+ LI+   ++     AL +Y  M+S+G+KP +  Y+ L + L +    E 
Sbjct: 186 AGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEM 245

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              L  EM+  G+  + + +   I  L + G I EA E+FR +       D+  Y  LID
Sbjct: 246 VMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLID 305

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            LC +G+L+ A ELF  +       D V Y  ++      G +D  ++ +  MEA
Sbjct: 306 ALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA 360



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 76/138 (55%), Gaps = 6/138 (4%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA   F +L+  G +P+   YN +INGL ++     AL L+ EM N     G+V  P+  
Sbjct: 981  EALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNR----GIV--PDLY 1034

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY +++  L   G V++AK ++ +++   + P+V TYN+LI G+  + +   A  ++  M
Sbjct: 1035 TYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094

Query: 122  MDQGVQPNVVSFNVIMNE 139
            M  G  PN+ ++  + N+
Sbjct: 1095 MVDGCNPNIGTYAQLPNQ 1112


>gi|125563733|gb|EAZ09113.1| hypothetical protein OsI_31378 [Oryza sativa Indica Group]
          Length = 618

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 203/376 (53%), Gaps = 22/376 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF++++  G  PN++TYN L++   +  +   AL  + ++     + G+V  PN V
Sbjct: 226 DAEGLFLEMKEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLL----KCGLV--PNDV 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +TT+IDGLCK   + +AK +FL M    + P V  YNSLIHG   +    EA   F E+
Sbjct: 280 IFTTLIDGLCKANRITEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEI 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + ++P+  + ++++  LC  G+M  A+R LE+M Q G+  NA  YN L+D +C +G +
Sbjct: 340 IRKELRPDEFTCSIVVRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNL 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M  +G + NV +YS LI+G+ KN E+E A+++Y+EM++KG++P+VV Y  L
Sbjct: 400 DEALVTCTRMSEVGVEPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTAL 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ AF L  EM+  G+ ++       +DGLC+   + +AV       I++Y
Sbjct: 460 IHGHAKNGDMDAAFWLQKEMEEKGIYSNAITVSVLVDGLCRENRVQDAVRF-----IMEY 514

Query: 302 ELDIRA-----------YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
               ++           Y  LI GL   G+   A   F  +    ++ D  TY ++I  L
Sbjct: 515 SGQKKSEKNPSIANSVTYMTLIYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGL 574

Query: 351 CADGKMDKARDLFLDM 366
           C  G +  A  L+ DM
Sbjct: 575 CMLGYVLNAMMLYADM 590



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 195/368 (52%), Gaps = 9/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F +LR     P +   N +++GL +         LF+EM       G    P+ V
Sbjct: 124 EALSVFGRLREL---PALPACNAILDGLVKAHMLARVWELFDEM------LGRGMVPSVV 174

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+    +G V KA E++ +M    I+PNVVTY ++I+  C  +   +A+ LF+EM
Sbjct: 175 TYNTLINACRHQGDVAKAWEVWDQMVARRIDPNVVTYTTMIYALCEEDCIGDAEGLFLEM 234

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PN+ ++N +M+   K   +  A      +++ G+ PN  ++ TL+DG C   R+
Sbjct: 235 KEAGMRPNLYTYNALMSSHFKRDNIKHALVFYYDLLKCGLVPNDVIFTTLIDGLCKANRI 294

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ +F+ M        V  Y+ LI+G  ++   + AL+ + E++ K ++PD    + +
Sbjct: 295 TEAKNIFLDMPRYEVAPTVPVYNSLIHGAFRSGYAQEALAFFQEIIRKELRPDEFTCSIV 354

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  Q++ A +  + MQ+ G+A +  AY   ID  CK+G + EA+     +  +  
Sbjct: 355 VRGLCDGGQMQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMSEVGV 414

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E ++  Y+ LIDG  K+G ++IA  ++  +    +  +VVTY  +IH    +G MD A  
Sbjct: 415 EPNVVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFW 474

Query: 362 LFLDMEAK 369
           L  +ME K
Sbjct: 475 LQKEMEEK 482



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 129/242 (53%), Gaps = 17/242 (7%)

Query: 1   MEAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+ A  F++ ++  G   N   YN LI+  C++G+   AL     M+    E GV  +PN
Sbjct: 364 MQVATRFLEVMQQSGIALNAAAYNVLIDEYCKSGNLDEALVTCTRMS----EVGV--EPN 417

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTY+++IDG  K G ++ A  ++ +M  + + PNVVTY +LIHG     D + A  L  
Sbjct: 418 VVTYSSLIDGHSKNGEMEIAMAIYTEMVAKGVEPNVVTYTALIHGHAKNGDMDAAFWLQK 477

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR--------PNAFVYNTL 171
           EM ++G+  N ++ +V+++ LC+  ++ +A R +  M   G +         N+  Y TL
Sbjct: 478 EMEEKGIYSNAITVSVLVDGLCRENRVQDAVRFI--MEYSGQKKSEKNPSIANSVTYMTL 535

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G  + G+ N A   F  M   G   + F+Y+++I G C    +  A+ LY++M+  G+
Sbjct: 536 IYGLYIDGQYNEACHFFSCMRDSGMVPDRFTYTLVIRGLCMLGYVLNAMMLYADMVKVGV 595

Query: 232 KP 233
           KP
Sbjct: 596 KP 597


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PNV +YN +I G CR  +   A  +++EM + NG       PN V
Sbjct: 267 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD-NG-----FTPNAV 320

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T ++DG  K+G ++ A  +F +MKD NI P   T   +I G C A    E + LF + 
Sbjct: 321 TFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 380

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P  + +N I++   K G ++ AS +   M ++G+ P+   Y +L+DGFC    +
Sbjct: 381 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 440

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M+  G K ++ +Y  LI+G+CK ++++ A  L +E+   G+ P+  IYN++
Sbjct: 441 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 500

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   ++ VE A  L+ +M   G+  D   Y + IDGL K+G ++ A ++   +     
Sbjct: 501 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 560

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D RA+  LI+GLC  G+ + A ++   +    +I  V+ YN +I     +G + +A  
Sbjct: 561 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 620

Query: 362 LFLDM 366
           L  +M
Sbjct: 621 LHDEM 625



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 185/353 (52%), Gaps = 8/353 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           NVFT+NTL++ LC+ G    A NL++E +A G         PN V+Y  II G C++  +
Sbjct: 248 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-------ISPNVVSYNNIILGHCRKDNI 300

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A +++ +M D    PN VT+  L+ G+    D   A  +F  M D  + P   +  +I
Sbjct: 301 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 360

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LCK G+  E   L    +  G  P    YNT++DGF   G +N A  ++  M  +G 
Sbjct: 361 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 420

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +Y+ LI+G+CK   I+ AL L ++M  KG+K D+  Y TL  G  +   ++ A +
Sbjct: 421 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 480

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L +E++  G++ + + Y + I G      + EA++L++ +       D++ Y  LIDGL 
Sbjct: 481 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 540

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           KSGRL  A ++   +    ++ D   + ++I+ LC  G+ + AR +  DM  K
Sbjct: 541 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK 593



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 180/407 (44%), Gaps = 48/407 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   F++ +  G E +   Y+  ++ LC   ++  AL+L  EM       G +  P  
Sbjct: 57  LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAA----GWI--PPE 110

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENIN----PNVVTYNSLIHGFCYANDWNEAKC 116
            T+T++I    KEG V +A    L++KD+ +N     N+    SL+ G+C   +   A  
Sbjct: 111 GTFTSVITACVKEGNVAEA----LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 166

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP------------- 163
           L  E+ + G+ PN V+++V+++  CKNG +++A      M   G+R              
Sbjct: 167 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 226

Query: 164 ---------------------NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
                                N F +NTL+   C  G++N A  L+  + + G   NV S
Sbjct: 227 KCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 286

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ +I G+C+   I  A  +Y EML  G  P+ V +  L  G F+   +E AF +F  M+
Sbjct: 287 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 346

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
              +          I GLCK G   E  +LF       +      YN +IDG  K G + 
Sbjct: 347 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 406

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +A  ++R +    +    VTY  +I   C    +D A  L  DM+ K
Sbjct: 407 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 453



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 143/278 (51%), Gaps = 6/278 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF K    G  P    YNT+I+G  + G+  +A N++ EM     E G+   P+TV
Sbjct: 372 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMC----EVGIT--PSTV 425

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++IDG CK   +D A +L   MK + +  ++  Y +LI GFC   D   A  L  E+
Sbjct: 426 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 485

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN   +N ++        ++EA  L + M+  G+  +   Y +L+DG   +GR+
Sbjct: 486 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 545

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M S G   +  ++++LING C   + E A  +  +M  K + P V+IYNTL
Sbjct: 546 LYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTL 605

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             G F+   ++ AF+L DEM   G+  D   Y   ++G
Sbjct: 606 IAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 161/351 (45%), Gaps = 7/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++   N L+  + R   T  A  L  +M        V    +  T   ++    KEG +
Sbjct: 3   PSIQCMNILLTAMVRKNMTCEARELHNKM------LLVGVTGDCFTLHVMLRACLKEGNI 56

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A++ FL+ K   +  +   Y+  +H  C   +   A  L  EM   G  P   +F  +
Sbjct: 57  LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSV 116

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    K G + EA RL + M+  G   N  V  +LM G+C+ G +  A  L   +   G 
Sbjct: 117 ITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGL 176

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N  +YS+LI+G CKN  IE A   YSEM +KGI+  V   N++  G  +    + AF 
Sbjct: 177 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 236

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F++    G+ A+ + + T +  LCK G + EA  L+  +       ++ +YN +I G C
Sbjct: 237 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 295

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +   +  A ++++ +       + VT+ I++      G ++ A  +F  M+
Sbjct: 296 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 346



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 128/280 (45%), Gaps = 3/280 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P++   N L+      N   EA+ L  +M+  GV  +  + +V++    K G + EA 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +        GV  +   Y+  +   CL      A  L   M + G      +++ +I   
Sbjct: 61  QHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITAC 120

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K   +  AL L  +M++ G   ++ +  +L  G      +  A  L +E+   G+  + 
Sbjct: 121 VKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNK 180

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR- 329
             Y   IDG CKNG I +A E +  ++       + + N +++G  K    + A+ +F  
Sbjct: 181 VTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND 240

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +L  G  +A+V T+N ++  LC +GKM++A +L+ ++ AK
Sbjct: 241 ALESG--LANVFTFNTLLSWLCKEGKMNEACNLWDEVIAK 278


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 193/362 (53%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++     +P++ TY+ LI+GLC+ G    A+ L++EM   N  F     PN+ 
Sbjct: 344 EALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMC-FNRIF-----PNSF 397

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++ I+ GLC++G +  A+  F  +   N+ P+V  YN +I G+    D  EA  L+  +
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+ + P++V+FN ++   CKN K+ EA RLLE +   G+ P+A  Y TLM+ +C  G +
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+  EL + M     +  V +Y+++I G CK +++E ++ L  +M +KG+ PD + YNT+
Sbjct: 518 NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTI 577

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +   + +AF+L D+M  H +      Y   IDGLC+ G + +A  +  +L+    
Sbjct: 578 IQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNI 637

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L   AY  +I   C  G  + A ++F  +        +  Y+ +I+ LC    +++A+ 
Sbjct: 638 NLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKY 697

Query: 362 LF 363
            F
Sbjct: 698 YF 699



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 186/368 (50%), Gaps = 7/368 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F  +  +G  P+ ++YN LI+GL   G    AL L  +M           +P+ VT
Sbjct: 204 AKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQG------LQPDMVT 257

Query: 63  YTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           Y  +  G    G +  A+E+  KM  DE + P++VTY  LI G C   +  EA  L  ++
Sbjct: 258 YKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDL 317

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G Q NV+ ++V+++ LCK G++DEA +LL  M    ++P+   Y+ L+ G C  G+V
Sbjct: 318 LSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKV 377

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +L+  M       N F++S ++ G C+   +  A   +  ++   ++PDV +YN +
Sbjct: 378 QQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIM 437

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  VE A +L+  ++   +      + + I G CKN  +VEA  L  ++++   
Sbjct: 438 IDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGL 497

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E     Y  L++  C+ G +    EL   +    +   VVTY ++I  LC   K++++  
Sbjct: 498 EPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQ 557

Query: 362 LFLDMEAK 369
           L  DM AK
Sbjct: 558 LLEDMRAK 565



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   L   G + NV  Y+ L++ LC+ G    AL L  EM   N       +P+ V
Sbjct: 309 EALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN------LQPDLV 362

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I GLCK+G V +A +L+ +M    I PN   ++ ++ G C     ++A+  F  +
Sbjct: 363 TYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   ++P+V  +N++++   K G ++EA RL + +    + P+   +N+L+ GFC   +V
Sbjct: 423 IMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKV 482

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L  S++  G + +  +Y+ L+N YC+   I     L  EM  K I+P VV Y  +
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVV 542

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++E + +L ++M+  G+A D   Y T I   CK   + +A EL   + I   
Sbjct: 543 IKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNL 602

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E     YN LIDGLC+ G ++ A  +  SL    +    V Y  MI A C  G   +A  
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVK 662

Query: 362 LFLDMEAK 369
           +F  M  K
Sbjct: 663 VFHQMVEK 670



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 191/354 (53%), Gaps = 7/354 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V ++NT+++  C+ G   VA + F  M     ++G++  P+T +Y  +I GL   G +
Sbjct: 183 PSVVSFNTIMSRYCKLGLADVAKSFFCMML----KYGIL--PDTYSYNILIHGLIVAGSM 236

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNV 135
           ++A EL   M+ + + P++VTY  +  GF      + A+ +  +M+ D+G++P++V++ V
Sbjct: 237 EEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTV 296

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++   C+ G ++EA RL   ++  G + N  +Y+ L+   C  G+V+ A +L   ME+  
Sbjct: 297 LICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + ++ +YSILI+G CK  +++ A+ LY EM    I P+   ++ +  GL E   +  A 
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
             FD +    +  D   Y   IDG  K G + EAV L++ LR       I  +N LI G 
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF 476

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK+ ++  A  L  S+    L    VTY  +++A C +G ++K  +L L+M  K
Sbjct: 477 CKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLK 530



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 194/392 (49%), Gaps = 33/392 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           +A  + +K++     P++ TYN+L+  L    HT +  +++ ++ +              
Sbjct: 101 DALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSIIV 157

Query: 48  ----GNGEF-----------GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
               G   F           G    P+ V++ TI+   CK G  D AK  F  M    I 
Sbjct: 158 DGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  +YN LIHG   A    EA  L  +M  QG+QP++V++ ++       G M  A  +
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 153 LELMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           ++ M+   G++P+   Y  L+ G C  G +  A  L   + S G + NV  YS+L++  C
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K  +++ AL L  EM +  ++PD+V Y+ L  GL +  +V++A +L+ EM  + +  +++
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           A+   + GLC+ G + +A   F +L +     D+  YN +IDG  K G ++ A  L++ L
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
               +   +VT+N +I+  C + K+ +AR L 
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLL 489



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 145/292 (49%), Gaps = 6/292 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ +LR     P++ T+N+LI G C+    + A  L E +     E      P+ V
Sbjct: 449 EAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLE------PSAV 502

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+++  C+EG ++K  EL L+M  ++I P VVTY  +I G C      E+  L  +M
Sbjct: 503 TYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDM 562

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+ +++N I+   CK   M +A  LL+ M+   + P    YN L+DG C  G V
Sbjct: 563 RAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDV 622

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ + VS++         +Y+ +I  +C   + + A+ ++ +M+ KG +  +  Y+ +
Sbjct: 623 EDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAV 682

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
              L +   +  A   F  M   GV+ D   +   ++   + G++    EL 
Sbjct: 683 INRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELL 734



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 156/322 (48%), Gaps = 35/322 (10%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIH-------------------------------- 103
           V  A  + +KMK++N+ P++ TYNSL++                                
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVD 158

Query: 104 GFCYANDWNEAKCLFIEMMD-QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
           G C  + + +A  LF+   D +   P+VVSFN IM+  CK G  D A     +M++ G+ 
Sbjct: 159 GLCGQSRFRDA-VLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+ + YN L+ G  + G +  A EL   ME  G + ++ +Y I+  G+     + GA  +
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 223 YSEMLS-KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
             +ML+ +G+KPD+V Y  L  G  ++  +E A +L  ++   G   +   Y   +  LC
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLC 337

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K G + EA++L   +     + D+  Y+ LI GLCK G+++ A +L++ +    +  +  
Sbjct: 338 KRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSF 397

Query: 342 TYNIMIHALCADGKMDKARDLF 363
            ++ ++  LC  G +  AR  F
Sbjct: 398 AHSGILKGLCEKGMLSDARMYF 419



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/269 (29%), Positives = 135/269 (50%), Gaps = 6/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +++ G EP+  TY TL+N  C  G+      L  EM   + E      P  
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIE------PTV 536

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +I GLCK+  ++++ +L   M+ + + P+ +TYN++I  FC A D  +A  L  +
Sbjct: 537 VTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD 596

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   ++P   ++NV+++ LC+ G +++A R+L  +    +      Y T++   C+ G 
Sbjct: 597 MLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGD 656

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             RA ++F  M   G + ++  YS +IN  CK   I  A   +  MLS G+ PD  I+  
Sbjct: 657 AQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEM 716

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +         V   F+L   M + G+  D
Sbjct: 717 MLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 76/157 (48%), Gaps = 3/157 (1%)

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           ++ +  AL +  +M  + ++P +  YN+L   L+ +   +  + ++++++  G       
Sbjct: 96  SRMVHDALFVLVKMKEQNLRPSIQTYNSL---LYNLRHTDIMWDVYNDIKDSGTPQSART 152

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
               +DGLC      +AV   R     ++   + ++N ++   CK G   +A   F  + 
Sbjct: 153 SSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  ++ D  +YNI+IH L   G M++A +L  DME +
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQ 249


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 195/365 (53%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PNV +YN +I G CR  +   A  +++EM + NG       PN V
Sbjct: 385 EACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD-NG-----FTPNAV 438

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T ++DG  K+G ++ A  +F +MKD NI P   T   +I G C A    E + LF + 
Sbjct: 439 TFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF 498

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P  + +N I++   K G ++ AS +   M ++G+ P+   Y +L+DGFC    +
Sbjct: 499 VSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNI 558

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M+  G K ++ +Y  LI+G+CK ++++ A  L +E+   G+ P+  IYN++
Sbjct: 559 DLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSM 618

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   ++ VE A  L+ +M   G+  D   Y + IDGL K+G ++ A ++   +     
Sbjct: 619 ITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGI 678

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D RA+  LI+GLC  G+ + A ++   +    +I  V+ YN +I     +G + +A  
Sbjct: 679 LPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFR 738

Query: 362 LFLDM 366
           L  +M
Sbjct: 739 LHDEM 743



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/353 (31%), Positives = 185/353 (52%), Gaps = 8/353 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           NVFT+NTL++ LC+ G    A NL++E +A G         PN V+Y  II G C++  +
Sbjct: 366 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-------ISPNVVSYNNIILGHCRKDNI 418

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A +++ +M D    PN VT+  L+ G+    D   A  +F  M D  + P   +  +I
Sbjct: 419 NAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGII 478

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LCK G+  E   L    +  G  P    YNT++DGF   G +N A  ++  M  +G 
Sbjct: 479 IKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGI 538

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +Y+ LI+G+CK   I+ AL L ++M  KG+K D+  Y TL  G  +   ++ A +
Sbjct: 539 TPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHE 598

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L +E++  G++ + + Y + I G      + EA++L++ +       D++ Y  LIDGL 
Sbjct: 599 LLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLL 658

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           KSGRL  A ++   +    ++ D   + ++I+ LC  G+ + AR +  DM  K
Sbjct: 659 KSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK 711



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 180/407 (44%), Gaps = 48/407 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   F++ +  G E +   Y+  ++ LC   ++  AL+L  EM       G +  P  
Sbjct: 175 LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAA----GWI--PPE 228

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENIN----PNVVTYNSLIHGFCYANDWNEAKC 116
            T+T++I    KEG V +A    L++KD+ +N     N+    SL+ G+C   +   A  
Sbjct: 229 GTFTSVITACVKEGNVAEA----LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALV 284

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP------------- 163
           L  E+ + G+ PN V+++V+++  CKNG +++A      M   G+R              
Sbjct: 285 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYL 344

Query: 164 ---------------------NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
                                N F +NTL+   C  G++N A  L+  + + G   NV S
Sbjct: 345 KCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVS 404

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ +I G+C+   I  A  +Y EML  G  P+ V +  L  G F+   +E AF +F  M+
Sbjct: 405 YNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 464

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
              +          I GLCK G   E  +LF       +      YN +IDG  K G + 
Sbjct: 465 DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNIN 524

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +A  ++R +    +    VTY  +I   C    +D A  L  DM+ K
Sbjct: 525 LASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRK 571



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 143/278 (51%), Gaps = 6/278 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF K    G  P    YNT+I+G  + G+  +A N++ EM     E G+   P+TV
Sbjct: 490 EGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMC----EVGIT--PSTV 543

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++IDG CK   +D A +L   MK + +  ++  Y +LI GFC   D   A  L  E+
Sbjct: 544 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 603

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN   +N ++        ++EA  L + M+  G+  +   Y +L+DG   +GR+
Sbjct: 604 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 663

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M S G   +  ++++LING C   + E A  +  +M  K + P V+IYNTL
Sbjct: 664 LYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTL 723

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             G F+   ++ AF+L DEM   G+  D   Y   ++G
Sbjct: 724 IAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 162/351 (46%), Gaps = 23/351 (6%)

Query: 29  LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC------------KEGFV 76
           L  +  T  A  LF++ A+G           +V ++ ++D L             +EG +
Sbjct: 125 LTNSAETHRAQYLFDQFASGK----------SVRFSCLMDRLVECTKLYNFPLDIQEGNI 174

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A++ FL+ K   +  +   Y+  +H  C   +   A  L  EM   G  P   +F  +
Sbjct: 175 LEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSV 234

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    K G + EA RL + M+  G   N  V  +LM G+C+ G +  A  L   +   G 
Sbjct: 235 ITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGL 294

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N  +YS+LI+G CKN  IE A   YSEM +KGI+  V   N++  G  +    + AF 
Sbjct: 295 VPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFT 354

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F++    G+ A+ + + T +  LCK G + EA  L+  +       ++ +YN +I G C
Sbjct: 355 MFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHC 413

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +   +  A ++++ +       + VT+ I++      G ++ A  +F  M+
Sbjct: 414 RKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMK 464



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 115/262 (43%), Gaps = 15/262 (5%)

Query: 121 MMDQGVQPNVVSFNVIMNELC------------KNGKMDEASRLLELMIQIGVRPNAFVY 168
           + DQ      V F+ +M+ L             + G + EA +        GV  +   Y
Sbjct: 137 LFDQFASGKSVRFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVELDQEAY 196

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           +  +   CL      A  L   M + G      +++ +I    K   +  AL L  +M++
Sbjct: 197 SIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVN 256

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G   ++ +  +L  G      +  A  L +E+   G+  +   Y   IDG CKNG I +
Sbjct: 257 CGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEK 316

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMI 347
           A E +  ++       + + N +++G  K    + A+ +F  +L  G  +A+V T+N ++
Sbjct: 317 AFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESG--LANVFTFNTLL 374

Query: 348 HALCADGKMDKARDLFLDMEAK 369
             LC +GKM++A +L+ ++ AK
Sbjct: 375 SWLCKEGKMNEACNLWDEVIAK 396


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 198/367 (53%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ ++   G   NV+T N ++N LC+ G          E+     E GV   P+ VT
Sbjct: 209 AWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQ----EKGVY--PDIVT 262

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I     +G +++A EL   M  +  +P V TYN++I+G C    +  AK +F EM+
Sbjct: 263 YNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 322

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  ++  ++ E CK G   E   +   M    V P+   ++++M  F  +G ++
Sbjct: 323 RSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 382

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A   F S++  G   +   Y+ILI GYC+   I  A++L +EML +G   DVV YNT+ 
Sbjct: 383 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTIL 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   +  A KLF+EM   G+  D++     IDG CK G +  A+ELF+ ++  + +
Sbjct: 443 HGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIK 502

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LD+  YN L+DG  K G +  A E++  +    ++   ++++I+++ALC+ G + +A  +
Sbjct: 503 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRV 562

Query: 363 FLDMEAK 369
           + +M +K
Sbjct: 563 WDEMISK 569



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G  P V+TYNT+INGLC+ G    A  +F EM            P++ 
Sbjct: 278 EAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDST 331

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++   CK+G   + + +F  M+  ++ P++V ++S++  F  + + ++A   F  +
Sbjct: 332 TYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 391

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+ V + +++   C+ G + EA  L   M+Q G   +   YNT++ G C    +
Sbjct: 392 KEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 451

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++LF  M   G   + ++ +ILI+G+CK   ++ A+ L+ +M  K IK DVV YNTL
Sbjct: 452 GEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL 511

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  ++ A +++ +M    +     ++   ++ LC  G++ EA  ++  +     
Sbjct: 512 LDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSI 571

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +   N +I G C+SG           +     + D ++YN +I+    +  M KA  
Sbjct: 572 KPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFG 631

Query: 362 LFLDMEAK 369
           L   ME K
Sbjct: 632 LVKKMEEK 639



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 155/290 (53%), Gaps = 8/290 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC  +V TYNT+++GLC+      A  LF EM    G F     P++ 
Sbjct: 418 EAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTE-RGLF-----PDSY 471

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T T +IDG CK G +  A ELF KMK++ I  +VVTYN+L+ GF    D + AK ++ +M
Sbjct: 472 TLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADM 531

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P  +SF++++N LC  G + EA R+ + MI   ++P   + N+++ G+C +G  
Sbjct: 532 VSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNA 591

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPDVVIYN 239
           +  E     M S G   +  SY+ LI G+ K + +  A  L  +M  K  G+ PDV  YN
Sbjct: 592 SDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYN 651

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           ++  G    +Q++ A  +  +M   GV  D   Y + I+G      + EA
Sbjct: 652 SILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEA 701



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 178/361 (49%), Gaps = 8/361 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E   +F  +R     P++  ++++++   R+G+   AL  F    N   E G++  P+ 
Sbjct: 347 VETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF----NSVKEAGLI--PDN 400

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT +I G C++G + +A  L  +M  +    +VVTYN+++HG C      EA  LF E
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P+  +  ++++  CK G +  A  L + M +  ++ +   YNTL+DGF   G 
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A+E++  M S        S+SIL+N  C    +  A  ++ EM+SK IKP V+I N+
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G              ++M   G   D  +Y T I G  K   + +A  L + +   +
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQ 640

Query: 301 YEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             L  D+  YN ++ G C+  ++K A  + R +    +  D  TY  +I+   +   + +
Sbjct: 641 GGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTE 700

Query: 359 A 359
           A
Sbjct: 701 A 701



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 149/304 (49%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I  L + G+V+ A  ++ ++    +  NV T N +++  C      +      E+ ++G
Sbjct: 196 LIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKG 255

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P++V++N +++     G M+EA  L+  M   G  P  + YNT+++G C  G+  RA+
Sbjct: 256 VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAK 315

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+F  M   G   +  +Y  L+   CK  +     +++S+M S+ + PD+V ++++    
Sbjct: 316 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLF 375

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                +++A   F+ ++  G+  D   Y   I G C+ G I EA+ L   +      +D+
Sbjct: 376 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDV 435

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN ++ GLCK   L  A +LF  +    L  D  T  I+I   C  G +  A +LF  
Sbjct: 436 VTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKK 495

Query: 366 MEAK 369
           M+ K
Sbjct: 496 MKEK 499



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 153/327 (46%), Gaps = 17/327 (5%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKM-------KDENINPNVVTYNS--------- 100
           K  +++ + +I  L + G +  A+   L+M       + E +N  V TY++         
Sbjct: 100 KHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFD 159

Query: 101 -LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            LI  F  A    EA   F  +  +G   ++ + N ++  L + G ++ A R+ + + + 
Sbjct: 160 LLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRS 219

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           GV  N +  N +++  C  G++ +       ++  G   ++ +Y+ LI+ Y     +E A
Sbjct: 220 GVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEA 279

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             L   M SKG  P V  YNT+  GL +  + ERA ++F EM R G++ D+  YR+ +  
Sbjct: 280 FELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 339

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            CK G  VE   +F  +R      D+  ++ ++    +SG L  A   F S+    LI D
Sbjct: 340 ACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 399

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
            V Y I+I   C  G + +A +L  +M
Sbjct: 400 NVIYTILIQGYCRKGMISEAMNLRNEM 426



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/256 (24%), Positives = 115/256 (44%), Gaps = 17/256 (6%)

Query: 131 VSFNVIMNELCKNGKMDEA-SRLLELMIQIGVR----------------PNAFVYNTLMD 173
           +S + +++ L ++G++ +A S +L ++ + GV                  N  V++ L+ 
Sbjct: 104 LSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVSRVEIVNSLVSTYSNCGSNDSVFDLLIR 163

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            F    ++  A E F  + S G   ++ + + LI    +   +E A  +Y E+   G+  
Sbjct: 164 TFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGV 223

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +V   N +   L +  ++E+      E+Q  GV  D   Y T I      G + EA EL 
Sbjct: 224 NVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM 283

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +    +   +  YN +I+GLCK G+ + A E+F  + R  L  D  TY  ++   C  
Sbjct: 284 HAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 343

Query: 354 GKMDKARDLFLDMEAK 369
           G   +  ++F DM ++
Sbjct: 344 GDAVETENIFSDMRSR 359



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 8/151 (5%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P V   N++I G CR+G+        E+M +     G V  P+ ++Y T+I G  KE  
Sbjct: 572 KPTVMICNSMIKGYCRSGNASDGEIFLEKMISE----GFV--PDCISYNTLIYGFVKEEN 625

Query: 76  VDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           + KA  L  KM+++   + P+V TYNS++HGFC  N   EA+ +  +M+++GV P+  ++
Sbjct: 626 MSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTY 685

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
             ++N       + EA R  + M+Q G  P+
Sbjct: 686 TSLINGFVSQDNLTEAFRFHDEMLQRGFSPD 716


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/399 (31%), Positives = 200/399 (50%), Gaps = 31/399 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA +LF     F   P+  T N L++ L R+ +  +A +++  M +              
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 48  -----------GNGEFGVVCKP----NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                      G G  G+V K     N      ++ GLC+ G V +A  L  +M  ++++
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++V+YN+LI+G C A    EA  L +EM   G  PN V+   +M+ LCK+G+MDEA  L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M + G   +  +Y TL+ GFC  G ++R +ELF  M   G   NV +YS L++G C+
Sbjct: 237 LEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCR 296

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             + + A ++ + M   GI PDVV Y  L  GL +  +   A  L + M   G       
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL- 331
           Y   + GLCK G +++A ++ R +     + D+  YN L+ GLC  G++  A +LF S+ 
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMF 416

Query: 332 -PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                L  +V T+N++I  LC +G++ KA  +   M  K
Sbjct: 417 DNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 182/370 (49%), Gaps = 8/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   G  P+V TY  LI+GLC+ G    A++L   M     E      P+ V
Sbjct: 302 EANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEE------PSNV 355

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLCKEG V  A ++   M ++    +VVTYN+L+ G C     +EA  LF  M
Sbjct: 356 TYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415

Query: 122 MDQG--VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            D    ++PNV +FN+++  LCK G++ +A ++   M++ G   N   YN L+ G    G
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAG 475

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  A EL+  +  +G   N F+YSILI+G+CK + +  A  L+ EM + G+ P +  YN
Sbjct: 476 KIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYN 535

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL   L +   +E+A  LF EM       D  ++ T IDG  K G      EL   +  +
Sbjct: 536 TLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEM 595

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   ++ LI+ L K G L  A      +       D + Y+ ++  L + G   + 
Sbjct: 596 GLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEI 655

Query: 360 RDLFLDMEAK 369
            +L   M AK
Sbjct: 656 INLLHQMAAK 665



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/340 (31%), Positives = 169/340 (49%), Gaps = 8/340 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+  TYN L++GLC+ G  I A  +   M           K + VTY T++ GLC +
Sbjct: 349 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK------KADVVTYNTLMKGLCDK 402

Query: 74  GFVDKAKELFLKMKD-EN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           G VD+A +LF  M D EN + PNV T+N LI G C      +A  +  +M+ +G   N+V
Sbjct: 403 GKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLV 462

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++N+++    K GK+ EA  L + ++ +G  PN+F Y+ L+DGFC    +N A+ LF  M
Sbjct: 463 TYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM 522

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            + G    +F Y+ L+   CK   +E A SL+ EM +   +PD++ +NT+  G  +    
Sbjct: 523 RTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDF 582

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           +   +L  +M   G+  D   + T I+ L K G + EA      +    +  D   Y+ L
Sbjct: 583 QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSL 642

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           + GL   G       L   +     + D    + ++  LC
Sbjct: 643 LKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/280 (33%), Positives = 137/280 (48%), Gaps = 6/280 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EPNVFT+N LI GLC+ G    A+ +  +M    G  G     N VTY  ++ G  K G 
Sbjct: 423 EPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVK-KGSCG-----NLVTYNMLLGGCLKAGK 476

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A EL+ ++ D    PN  TY+ LI GFC     N AK LF EM   G+ P +  +N 
Sbjct: 477 IKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNT 536

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +M  LCK G +++A  L + M      P+   +NT++DG    G     +EL + M  MG
Sbjct: 537 LMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMG 596

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + +  ++S LIN   K  E++ A S    M++ G  PD ++Y++L  GL          
Sbjct: 597 LRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEII 656

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
            L  +M   G   D     T +  LC +   V+ +EL  T
Sbjct: 657 NLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPT 696



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/337 (28%), Positives = 165/337 (48%), Gaps = 4/337 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +V TYNTL+ GLC  G    AL LF  M +         +PN  T+  +I GLCKE
Sbjct: 384 GKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNEN----CLEPNVFTFNMLIGGLCKE 439

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + KA ++  KM  +    N+VTYN L+ G   A    EA  L+ +++D G  PN  ++
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 499

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  CK   ++ A  L   M   G+ P  F YNTLM   C  G + +A+ LF  M +
Sbjct: 500 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 559

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C+ ++ S++ +I+G  K  + +    L  +M+  G++PD + ++TL   L ++ +++ 
Sbjct: 560 ANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDE 619

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A    + M   G   D   Y + + GL   G   E + L   +      LD +  + ++ 
Sbjct: 620 AKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILT 679

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            LC S +     EL  +  +G      ++ N ++  L
Sbjct: 680 CLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 716



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 105/235 (44%), Gaps = 2/235 (0%)

Query: 137 MNELCK--NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +  LC+  N +  EA  L    +   + P+    N L+D    +     A  ++  M  +
Sbjct: 44  LRSLCQKPNSQFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHV 103

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
               +  S S LI  +   ++ +    +   +L +G   +V I N +  GL     V  A
Sbjct: 104 DVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEA 163

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L  EM R  V+ D  +Y T I+GLCK   + EAV L   +       +      L+DG
Sbjct: 164 MGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDG 223

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LCK GR+  A EL  ++ +    ADVV Y  +I   C +G +D+ ++LF +M  K
Sbjct: 224 LCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK 278



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 29/185 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------- 49
           A  LF ++R  G  P +F YNTL+  LC+ G    A +LF+EM N N             
Sbjct: 515 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 574

Query: 50  -----GEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                G+F  V            +P+ +T++T+I+ L K G +D+AK    +M      P
Sbjct: 575 GTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTP 634

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + + Y+SL+ G     D  E   L  +M  +G   +    + I+  LC + +  +   LL
Sbjct: 635 DALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694

Query: 154 ELMIQ 158
               Q
Sbjct: 695 PTFFQ 699


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  202 bits (515), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/394 (31%), Positives = 198/394 (50%), Gaps = 34/394 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF K+   GC+PN FT   L+ G CR G T  AL   +    GN         N V
Sbjct: 169 HARELFDKMSEKGCQPNKFTVGILVRGFCRAGRTKQALEFVDGKMGGN--------VNRV 220

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++   CK+   D+A++L  +M ++ + P+VVT+NS I   C A    EA  +F +M
Sbjct: 221 VYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDM 280

Query: 122 MDQG----VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              G     +PNVV+FN+++   C+ G M+EA  L+E M + G   +   YNT + G   
Sbjct: 281 QMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLR 340

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++     +   M   G + N++SY+I+++G C+N  +  A  L   M+S G+ PD V 
Sbjct: 341 NGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVT 400

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G     +V  A  + +EM R G   +T+   T ++ L K G   EA E+ + + 
Sbjct: 401 YTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMN 460

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL------------PRGVL--------- 336
              Y+LD    N +++GLC++G L+ A E+   +            P   L         
Sbjct: 461 EKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVST 520

Query: 337 -IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + DV+TY  +I+ LC  GK+++A+  F++M AK
Sbjct: 521 NVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAK 554



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/422 (29%), Positives = 201/422 (47%), Gaps = 59/422 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+V T+N+ I+ LCR G    A  +F +M   +GE G+  KPN V
Sbjct: 237 EAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQM-DGELGLP-KPNVV 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ G C+EG +++A+ L   MK      ++ +YN+ + G        E + +  EM
Sbjct: 295 TFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G++PN+ S+N++M+ LC+N  M +A RL++LM+  GV P+   Y TL+ G+C  G+V
Sbjct: 355 VENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKV 414

Query: 182 NRAEELFVSMESMGCKHNVF----------------------------SY-------SIL 206
             A+ +   M   GC  N +                            SY       +I+
Sbjct: 415 FEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIV 474

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIK----------------------PDVVIYNTLFIG 244
           +NG C+N E+E A  + SEM + G                        PDV+ Y TL  G
Sbjct: 475 VNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLING 534

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++ ++E A K F EM    +  D+  Y TF+   CK G I  A+ + + +        
Sbjct: 535 LCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKT 594

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           ++ YN LI GL   G++   + L   +    +  D+ TYN MI+ LC  GK   A  L  
Sbjct: 595 LQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLH 654

Query: 365 DM 366
           +M
Sbjct: 655 EM 656



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 173/385 (44%), Gaps = 63/385 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A+  ++   GC PN +T NTL+N L + G    A  + ++M   + +       +TV
Sbjct: 416 EAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQL------DTV 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENIN----------------------PNVVTYN 99
           T   +++GLC+ G ++KA E+  +M  +  N                      P+V+TY 
Sbjct: 470 TCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYT 529

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           +LI+G C      EAK  FIEMM + + P+ V+++  +   CK GK+  A R+L+ M + 
Sbjct: 530 TLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERN 589

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G       YN+L+ G    G++     L   M   G   ++ +Y+ +IN  C+  + + A
Sbjct: 590 GCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDA 649

Query: 220 LSLYSEMLSKG-IKPDV----------------------------------VIYNTLFIG 244
            SL  EML KG + P+V                                   +Y+ +F  
Sbjct: 650 TSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSVCGHKEALYSLMFNE 709

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    ++  A +LF+      + +  + Y   ID LCK+G + +A  L + L    Y  D
Sbjct: 710 LLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFD 769

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFR 329
             ++  +IDGL K G  + A EL R
Sbjct: 770 HSSFIPVIDGLSKRGNKQQADELGR 794



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/294 (30%), Positives = 140/294 (47%), Gaps = 9/294 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TY TLINGLC+ G    A   F EM   N        P++VTY T +   CK+G +
Sbjct: 523 PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKN------LHPDSVTYDTFVLNFCKQGKI 576

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  +   M+    +  + TYNSLI G        E   L  EM ++G+ P++ ++N +
Sbjct: 577 SSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNM 636

Query: 137 MNELCKNGKMDEASRLLELMIQIGV-RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +N LC+ GK  +A+ LL  M+  GV  PN   +  L+  FC +G    A ELF    S+ 
Sbjct: 637 INCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV- 695

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C H    YS++ N      ++  A  L+   L + +     +Y  L   L +  +++ A 
Sbjct: 696 CGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAH 755

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-LKYELDIRAY 308
            L  ++   G   D  ++   IDGL K G   +A EL R + + L+ +   R Y
Sbjct: 756 GLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELALEDKTSDRTY 809



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 124/251 (49%), Gaps = 6/251 (2%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L+ +M+  GV P   +FN+++  LC++  +D A  L + M + G +PN F    L+ GFC
Sbjct: 138 LYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVGILVRGFC 197

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR  +A E FV  + MG   N   Y+ L++ +CK    + A  L   M  KG+ PDVV
Sbjct: 198 RAGRTKQALE-FVDGK-MGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVV 255

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHG----VAADTWAYRTFIDGLCKNGYIVEAVEL 292
            +N+    L    +V  A ++F +MQ  G       +   +   + G C+ G + EA  L
Sbjct: 256 TFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGMMEEARSL 315

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
             T++     + + +YN  + GL ++G+L     +   +    +  ++ +YNI++  LC 
Sbjct: 316 VETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCR 375

Query: 353 DGKMDKARDLF 363
           +  M  AR L 
Sbjct: 376 NHMMLDARRLM 386



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 6/192 (3%)

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R +    L+  M   G     +++++LI   C++  ++ A  L+ +M  KG +P+     
Sbjct: 131 RPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPNKFTVG 190

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G     + ++A +  D   + G   +   Y T +   CK     EA +L   +   
Sbjct: 191 ILVRGFCRAGRTKQALEFVD--GKMGGNVNRVVYNTLVSSFCKQDMNDEAEKLVERMTEK 248

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR----GVLIADVVTYNIMIHALCADGK 355
               D+  +N  I  LC++G++  A  +FR +      G+   +VVT+N+M+   C +G 
Sbjct: 249 GLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGFCQEGM 308

Query: 356 MDKARDLFLDME 367
           M++AR L   M+
Sbjct: 309 MEEARSLVETMK 320


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/355 (34%), Positives = 181/355 (50%), Gaps = 6/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPNV TY   I   CR      A +L+EEM       GV+  P+ VT + ++ GLCK+
Sbjct: 239 GVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRK----GVL--PDVVTLSALVGGLCKD 292

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  LF +M+     PN VTY  LI     A   NE+  L  E++ +GV  +++ +
Sbjct: 293 GRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMY 352

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M+ LCK GK+DEA  +    +     PN   Y  L+D  C  G V+ AE++   ME 
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE 412

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                NV ++S +ING  K   +  A     EM  +GI P+VV Y T+  G F+    E 
Sbjct: 413 KSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA 472

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  ++ EM   GV  + +   + ++GL KNG I +A  LFR +      LD   Y  LID
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLID 532

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           GL K+G L  A+++ + L    L+ D V YN+ I+ LC  GK  +A     +M++
Sbjct: 533 GLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQS 587



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/404 (29%), Positives = 191/404 (47%), Gaps = 45/404 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L+ ++   G  P+V T + L+ GLC+ G    A  LF EM        +   PN V
Sbjct: 262 DAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEK------IGAAPNHV 315

Query: 62  TY-----------------------------------TTIIDGLCKEGFVDKAKELFLKM 86
           TY                                   T ++D LCKEG +D+AK++F   
Sbjct: 316 TYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHA 375

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
             +N  PN VTY  LI   C A + + A+ +  EM ++ + PNVV+F+ I+N L K G +
Sbjct: 376 LSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWV 435

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGF--CLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            +A+  +  M + G+ PN   Y T++DG   CL      A +++  M   G + N F   
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA--ALDVYHEMLCEGVEVNKFIVD 493

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            L+NG  KN +IE A +L+ EM  +G+  D V Y TL  GLF+   +  AFK+  E+   
Sbjct: 494 SLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEK 553

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
            +  D   Y  FI+ LC  G   EA      ++    + D   YN +I    + G+   A
Sbjct: 554 NLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKA 613

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +L   + R  +  +++TY+ +I  L   G ++KA+ L  +M +
Sbjct: 614 LKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSS 657



 Score =  160 bits (406), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 164/354 (46%), Gaps = 8/354 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   YN  IN LC  G +  A +  EEM +         KP+ VTY T+I    +EG  
Sbjct: 557 PDAVVYNVFINCLCMLGKSKEAESFLEEMQSTG------LKPDQVTYNTMIAAQSREGKT 610

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA +L   MK  +I PN++TY++LI G   A    +AK L  EM   G  P  ++   +
Sbjct: 611 AKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRV 670

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    +  + D    + E M+  G+  +  VYNTL+   C  G   +A  +   M   G 
Sbjct: 671 LQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGI 730

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +++ LI G+ K+  ++ A S Y +ML  GI P+V  +NTL  GL    ++  +  
Sbjct: 731 APDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDM 790

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + +EM++ G+      Y   + G  K    VEAV L+  +    +   +  YN LI    
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFS 850

Query: 317 KSGRLKIAWELFRSLP-RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G +  A ELF  +  RGVL     TY+I++          + R    DM+ K
Sbjct: 851 KVGMMSQAKELFNEMQNRGVLPTS-CTYDILVSGWSKLRNGTEVRKFLKDMKEK 903



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 172/356 (48%), Gaps = 12/356 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TY  LI+ LC+ G+   A  +  EM   +        PN VT+++II+GL K G+V
Sbjct: 382 PNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKS------ISPNVVTFSSIINGLVKRGWV 435

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA +   +MK+  I+PNVVTY ++I G         A  ++ EM+ +GV+ N    + +
Sbjct: 436 GKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSL 495

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N L KNGK+++A  L   M + GV  +   Y TL+DG   TG +  A ++   +     
Sbjct: 496 VNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNL 555

Query: 197 KHNVFSYSILINGYC---KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             +   Y++ IN  C   K+KE E   S   EM S G+KPD V YNT+        +  +
Sbjct: 556 LPDAVVYNVFINCLCMLGKSKEAE---SFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAK 612

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KL + M+R  +  +   Y T I GL + G + +A  L   +    +      +  ++ 
Sbjct: 613 ALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQ 672

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +  R  +  E+   +    L AD+  YN ++  LC +G   KA  +  +M  +
Sbjct: 673 ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGR 728



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 179/391 (45%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E N F  ++L+NGL + G    A  LF EM     E GV+   + V YTT+IDGL K 
Sbjct: 484 GVEVNKFIVDSLVNGLKKNGKIEKAEALFREM----NERGVLL--DHVNYTTLIDGLFKT 537

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A ++  ++ ++N+ P+ V YN  I+  C      EA+    EM   G++P+ V++
Sbjct: 538 GNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTY 597

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++    + GK  +A +LL  M +  ++PN   Y+TL+ G    G V +A+ L   M S
Sbjct: 598 NTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSS 657

Query: 194 MG--------------CKH---------------------NVFSYSILINGYCKNKEIEG 218
            G              C                       ++  Y+ L+   C N     
Sbjct: 658 SGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRK 717

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+ +  EM  +GI PD + +N L +G F+   ++ AF  +D+M  HG++ +   + T + 
Sbjct: 718 AMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLG 777

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GL   G I E+  +   ++    E     Y+ L+ G  K      A  L+  +     + 
Sbjct: 778 GLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLP 837

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            V TYN +I      G M +A++LF +M+ +
Sbjct: 838 KVSTYNALISDFSKVGMMSQAKELFNEMQNR 868



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 160/365 (43%), Gaps = 44/365 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +   +++  G +P+  TYNT+I    R G T  AL L   M   +       KPN +
Sbjct: 577 EAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSS------IKPNLI 630

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT------------------------ 97
           TY+T+I GL + G V+KAK L  +M     +P  +T                        
Sbjct: 631 TYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWM 690

Query: 98  -----------YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                      YN+L+   CY     +A  +  EM  +G+ P+ ++FN ++    K+G +
Sbjct: 691 MNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHL 750

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A    + M+  G+ PN   +NTL+ G    GR+  ++ +   M+  G + +  +Y IL
Sbjct: 751 DNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDIL 810

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + GY K      A+ LY EM+ KG  P V  YN L     ++  + +A +LF+EMQ  GV
Sbjct: 811 VTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGV 870

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
              +  Y   + G  K     E  +  + ++   +       + +     K G   ++WE
Sbjct: 871 LPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPG---MSWE 927

Query: 327 LFRSL 331
             R L
Sbjct: 928 ARRLL 932



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 150/313 (47%), Gaps = 38/313 (12%)

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           + V+YN ++ GF         + L  EM  +GV  + V+ N ++  LC++G++D A+ L 
Sbjct: 102 DTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGRVDRAAALA 160

Query: 154 ELMI---------------------QIGVRPNAFV----------------YNTLMDGFC 176
           E+M+                     ++G    AF                 YN+L+ G C
Sbjct: 161 EVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGLC 220

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G V+ A ++  +M+  G + NV +Y++ I  YC+   ++ A SLY EM+ KG+ PDVV
Sbjct: 221 RAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVV 280

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             + L  GL +  +   A+ LF EM++ G A +   Y   ID L K     E++ L   +
Sbjct: 281 TLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEV 340

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                 +D+  Y  L+D LCK G++  A ++FR         + VTY ++I ALC  G +
Sbjct: 341 VSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNV 400

Query: 357 DKARDLFLDMEAK 369
           D A  +  +ME K
Sbjct: 401 DGAEQVLSEMEEK 413



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 129/295 (43%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  P   T+  ++    +   + + L + E M N       +C   TV
Sbjct: 647 KAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAG-----LCADITV 701

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++  LC  G   KA  +  +M    I P+ +T+N+LI G   +   + A   + +M
Sbjct: 702 -YNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQM 760

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PNV +FN ++  L   G++ E+  +L  M + G+ P+   Y+ L+ G+      
Sbjct: 761 LYHGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNK 820

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   G    V +Y+ LI+ + K   +  A  L++EM ++G+ P    Y+ L
Sbjct: 821 VEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDIL 880

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             G  ++       K   +M+  G +       +      K G   EA  L + L
Sbjct: 881 VSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 6/158 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  +  +++  G EP+  TY+ L+ G  +  + + A+ L+ EM  G G       P   
Sbjct: 787 ESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMV-GKGFL-----PKVS 840

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I    K G + +AKELF +M++  + P   TY+ L+ G+    +  E +    +M
Sbjct: 841 TYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDM 900

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            ++G  P+  + + I     K G   EA RLL+ + ++
Sbjct: 901 KEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYKV 938



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 6/118 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ ++   G  P V TYN LI+   + G    A  LF EM N     GV+  P +
Sbjct: 821 VEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQN----RGVL--PTS 874

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            TY  ++ G  K     + ++    MK++  +P+  T +S+   F       EA+ L 
Sbjct: 875 CTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLL 932


>gi|302780869|ref|XP_002972209.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
 gi|300160508|gb|EFJ27126.1| hypothetical protein SELMODRAFT_96926 [Selaginella moellendorffii]
          Length = 363

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/357 (33%), Positives = 180/357 (50%), Gaps = 27/357 (7%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           + ++G EPN+ TYN+LI+G C T      L L EEM          C P+  TY T+IDG
Sbjct: 1   MTIWGIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMT------ATGCLPDINTYNTLIDG 54

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK G V +   LF +MK +  NP+V+TY+ LI GFC  +  N A  LF +M+ Q   P+
Sbjct: 55  LCKTGRVPEVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPD 114

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+F  ++   C  G +D+A RLLE ++     P+ + Y +L+DGFC   R+  A  +  
Sbjct: 115 VVTFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLK 174

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M    C+ NV  Y+ LI+ +C   +   A  L  EM+  G++P+ + Y +L  G     
Sbjct: 175 RMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTG 234

Query: 250 QVERAFKLFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +E A K+ + ++R+    AD +AYR  +DGLC+ G +  A+EL   ++          Y
Sbjct: 235 DLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIY 294

Query: 309 NCLIDG---LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             LI G   L + GR                  +   Y  +I  L  +G+ +KA  L
Sbjct: 295 VALIRGEMTLSRKGR-----------------PNAKVYEAVIQELAREGRHEKANAL 334



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 86/270 (31%), Positives = 138/270 (51%), Gaps = 12/270 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF +++   C P+V TY+ LI G C+     +A  LF++M            P+ V
Sbjct: 63  EVNRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDM------LKQAALPDVV 116

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+++G C  G VD A+ L  ++   + +P+V TY SL+ GFC      EA  +   M
Sbjct: 117 TFPTLVEGYCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRM 176

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                QPNVV +  +++  C  GK   A +LLE M+  GV+PNA  Y +L+ GFC TG +
Sbjct: 177 AKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDL 236

Query: 182 NRAEELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             A ++   +E +  CK ++F+Y ++++G C+   +  AL L   +   G  P   IY  
Sbjct: 237 EEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVA 296

Query: 241 LFIGLFEIHQVERA-FKLFD----EMQRHG 265
           L  G   + +  R   K+++    E+ R G
Sbjct: 297 LIRGEMTLSRKGRPNAKVYEAVIQELAREG 326



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 128/243 (52%)

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++PN+V++N +++  C    +D    L+E M   G  P+   YNTL+DG C TGRV   
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  M++  C  +V +YS LI G+CK   I  A +L+ +ML +   PDVV + TL  G
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
                 V+ A +L +E+     + D + Y + +DG CK   +VEA  + + +   + + +
Sbjct: 125 YCNAGLVDDAERLLEEIVASDCSPDVYTYTSLVDGFCKVKRMVEAHRVLKRMAKGECQPN 184

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  LID  C +G+  +A++L   +    +  + +TY  +I   C  G +++A  +  
Sbjct: 185 VVIYTALIDAFCSAGKPTVAYKLLEEMVGNGVQPNAITYRSLIGGFCGTGDLEEAHKMLE 244

Query: 365 DME 367
            +E
Sbjct: 245 RLE 247



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 71/140 (50%)

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           GI+P++V YN+L  G    + V+    L +EM   G   D   Y T IDGLCK G + E 
Sbjct: 5   GIEPNMVTYNSLIHGFCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTGRVPEV 64

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
             LF  ++      D+  Y+CLI G CK  R+ +A  LF  + +   + DVVT+  ++  
Sbjct: 65  NRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTFPTLVEG 124

Query: 350 LCADGKMDKARDLFLDMEAK 369
            C  G +D A  L  ++ A 
Sbjct: 125 YCNAGLVDDAERLLEEIVAS 144



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 24/214 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++    C+PNV  Y  LI+  C  G   VA  L EEM  GNG      +PN 
Sbjct: 167 VEAHRVLKRMAKGECQPNVVIYTALIDAFCSAGKPTVAYKLLEEMV-GNG-----VQPNA 220

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +TY ++I G C  G +++A ++  ++ ++EN   ++  Y  ++ G C     + A  L  
Sbjct: 221 ITYRSLIGGFCGTGDLEEAHKMLERLERNENCKADMFAYRVMMDGLCRTGRMSAALELLE 280

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            +   G  P    +  ++                E+ +    RPNA VY  ++      G
Sbjct: 281 AIKQSGTPPRHDIYVALIRG--------------EMTLSRKGRPNAKVYEAVIQELAREG 326

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           R  +A  L  S E +G K +   + ++ N +C N
Sbjct: 327 RHEKANAL--SDELLGNKASKTRF-VITNPHCVN 357


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  202 bits (515), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 187/348 (53%), Gaps = 13/348 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VF+YN L+NGLC    +  AL L   MA+  G+    C P+ V+Y+T+I+G  KEG +
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGD----CPPDVVSYSTVINGFFKEGDL 104

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DK       M D+ I+PNVVTYNS+I   C A   ++A  +   M+  GV P+ +++N I
Sbjct: 105 DK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  C +G+  EA   L+ M   GV P+   YN+LMD  C  GR   A ++F SM   G 
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K ++ +Y  L+ GY     +     L   M+  GI P+  +++ L     +  +VE A  
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F +M++ G+  +   Y T ID LCK+G + +A+  F  +       D   YN LI  LC
Sbjct: 278 VFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLC 337

Query: 317 KSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              + + A ELF   L RG+ ++  + +N +I + C +G++ ++  LF
Sbjct: 338 IFDKWEKAEELFLEMLDRGICLS-TIFFNSIIDSHCKEGRVIESGKLF 384



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 173/328 (52%), Gaps = 13/328 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V +Y+T+ING  + G         ++M +          PN VTY +II  LCK  
Sbjct: 84  CPPDVVSYSTVINGFFKEGD-------LDKMLDQR------ISPNVVTYNSIIAALCKAQ 130

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VDKA E+   M    + P+ +TYNS++HGFC +    EA     +M   GV+P+VV++N
Sbjct: 131 TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 190

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +M+ LCKNG+  EA ++ + M + G++P+   Y TL+ G+   G +     L   M   
Sbjct: 191 SLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 250

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   N + +SIL+  Y K +++E A+ ++S+M  +G+ P+ V Y T+   L +  +VE A
Sbjct: 251 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDA 310

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
              F++M   G+  D+  Y + I  LC      +A ELF  +      L    +N +ID 
Sbjct: 311 MLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDS 370

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVT 342
            CK GR+  + +LF  + R  +  D++T
Sbjct: 371 HCKEGRVIESGKLFDLMVRIGVKPDIIT 398



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 165/311 (53%), Gaps = 9/311 (2%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAK 115
           P+  +Y  +++GLC E    +A EL   M D+  +  P+VV+Y+++I+GF    D ++  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
                M+DQ + PNVV++N I+  LCK   +D+A  +L  M++ GV P+   YN+++ GF
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C +G+   A      M S G + +V +Y+ L++  CKN     A  ++  M  +G+KPD+
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             Y TL  G      +     L D M R+G+  + + +   +    K   + EA+ +F  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +R      +   Y  +ID LCKSGR++ A   F  +    L  D + YN +IH+LC   K
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 356 MDKARDLFLDM 366
            +KA +LFL+M
Sbjct: 342 WEKAEELFLEM 352



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 127/236 (53%), Gaps = 8/236 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EP+V TYN+L++ LC+ G    A  +F+ M           KP+  
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG------LKPDIT 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+PN   ++ L+  +       EA  +F +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN V++  +++ LCK+G++++A    E MI  G+RP++ VYN+L+   C+  + 
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 182 NRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            +AEELF+ M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KPD++
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSI-IDSHCKEGRVIESGKLFDLMVRIGVKPDII 397



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 130/256 (50%), Gaps = 6/256 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYN++++G C +G    A+   ++M +   E      P+ VTY +++D LCK 
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVE------PDVVTYNSLMDYLCKN 199

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A+++F  M    + P++ TY +L+ G+       E   L   M+  G+ PN   F
Sbjct: 200 GRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 259

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++++    K  K++EA  +   M Q G+ PNA  Y T++D  C +GRV  A   F  M  
Sbjct: 260 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 319

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + +   Y+ LI+  C   + E A  L+ EML +GI    + +N++     +  +V  
Sbjct: 320 EGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIE 379

Query: 254 AFKLFDEMQRHGVAAD 269
           + KLFD M R GV  D
Sbjct: 380 SGKLFDLMVRIGVKPD 395



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 10/212 (4%)

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYS 204
           ++A  + + +++ G+ P+ F YN L++G C   R   A EL   M   G  C  +V SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +ING+ K  +++       +ML + I P+VV YN++   L +   V++A ++   M + 
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           GV  D   Y + + G C +G   EA+   + +R    E D+  YN L+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            ++F S+ +  L  D+ TY  ++      G +
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGAL 237



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 10/259 (3%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNT 170
           +A+ +F E++ +G+ P+V S+N+++N LC   +  EA  LL +M   G    P+   Y+T
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++GF   G +++  +  +S        NV +Y+ +I   CK + ++ A+ + + M+  G
Sbjct: 94  VINGFFKEGDLDKMLDQRIS-------PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           + PD + YN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA 
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           ++F ++     + DI  Y  L+ G    G L     L   + R  +  +   ++I++ A 
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266

Query: 351 CADGKMDKARDLFLDMEAK 369
               K+++A  +F  M  +
Sbjct: 267 AKQEKVEEAMLVFSKMRQQ 285



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 6/132 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+R  G  PN  TY T+I+ LC++G    A+  FE+M +         +P+++
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG------LRPDSI 327

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y ++I  LC     +KA+ELFL+M D  I  + + +NS+I   C      E+  LF  M
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 122 MDQGVQPNVVSF 133
           +  GV+P++++ 
Sbjct: 388 VRIGVKPDIITL 399


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 188/352 (53%), Gaps = 6/352 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C+P V TY  LI      G    AL L +EM +         KP+  TY TII G+CKEG
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRG------LKPDMFTYNTIIRGMCKEG 273

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD+A E+   ++ +   P+V++YN L+        W E + L  +M  +   PNVV+++
Sbjct: 274 MVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 333

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++  LC++GK++EA  LL+LM + G+ P+A+ Y+ L+  FC  GR++ A E   +M S 
Sbjct: 334 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 393

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ ++   CKN + + AL ++ ++   G  P+   YNT+F  L+      RA
Sbjct: 394 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 453

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +  EM  +G+  D   Y + I  LC+ G + +A EL   +R  ++   +  YN ++ G
Sbjct: 454 LHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLG 513

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            CK+ R++ A ++  S+       +  TY ++I  +   G   +A +L  D+
Sbjct: 514 FCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 565



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 178/359 (49%), Gaps = 7/359 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L  FG +P+VF YN LING C+      A  + + M + +        P+TVTY  +I  
Sbjct: 146 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGS 198

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC  G +D A ++  ++  +N  P V+TY  LI         +EA  L  EM+ +G++P+
Sbjct: 199 LCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPD 258

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           + ++N I+  +CK G +D A  ++  +   G  P+   YN L+      G+    E+L  
Sbjct: 259 MFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 318

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M S  C  NV +YSILI   C++ +IE A++L   M  KG+ PD   Y+ L        
Sbjct: 319 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 378

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +++ A +  + M   G   D   Y T +  LCKNG   +A+E+F  L  +    +  +YN
Sbjct: 379 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 438

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +   L  SG    A  +   +    +  D +TYN MI  LC +G +DKA +L +DM +
Sbjct: 439 TMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRS 497



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/320 (29%), Positives = 155/320 (48%), Gaps = 29/320 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-----------------------HTIVA 38
           EA  L  ++   G +P++FTYNT+I G+C+ G                       + I+ 
Sbjct: 242 EALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILL 301

Query: 39  LNLFEEMANGNGE------FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
             L  +     GE      F   C PN VTY+ +I  LC++G +++A  L   MK++ + 
Sbjct: 302 RALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLT 361

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  +Y+ LI  FC     + A      M+  G  P++V++N ++  LCKNGK D+A  +
Sbjct: 362 PDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEI 421

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              + ++G  PN+  YNT+      +G   RA  + + M S G   +  +Y+ +I+  C+
Sbjct: 422 FGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCR 481

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              ++ A  L  +M S    P VV YN + +G  + H++E A  + D M  +G   +   
Sbjct: 482 EGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETT 541

Query: 273 YRTFIDGLCKNGYIVEAVEL 292
           Y   I+G+   GY  EA+EL
Sbjct: 542 YTVLIEGIGFAGYRAEAMEL 561



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 36/328 (10%)

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+ G   ++  L   M  +  NP+V+    LI GF    +  +A    +E++++  QP+V
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKA-VRVMEILEKFGQPDV 154

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            ++N ++N  CK  ++D+A+R+L+ M      P+   YN ++   C  G+++ A ++   
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           + S  C+  V +Y+ILI        ++ AL L  EMLS+G+KPD+  YNT+  G+ +   
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 251 VERAFKLFDEMQRHGVAADT---------------W--------------------AYRT 275
           V+RAF++   ++  G   D                W                     Y  
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I  LC++G I EA+ L + ++      D  +Y+ LI   C+ GRL +A E   ++    
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 394

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLF 363
            + D+V YN ++  LC +GK D+A ++F
Sbjct: 395 CLPDIVNYNTVLATLCKNGKADQALEIF 422



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 138/269 (51%), Gaps = 1/269 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           + H  C + ++ E+  L   M+ +G  P+V+    ++        + +A R++E++ + G
Sbjct: 91  IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG 150

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            +P+ F YN L++GFC   R++ A  +   M S     +  +Y+I+I   C   +++ AL
Sbjct: 151 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 209

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  ++LS   +P V+ Y  L         V+ A KL DEM   G+  D + Y T I G+
Sbjct: 210 KVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGM 269

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G +  A E+ R L +   E D+ +YN L+  L   G+ +   +L   +       +V
Sbjct: 270 CKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 329

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VTY+I+I  LC DGK+++A +L   M+ K
Sbjct: 330 VTYSILITTLCRDGKIEEAMNLLKLMKEK 358



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 138/297 (46%), Gaps = 43/297 (14%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +   L + GCEP+V +YN L+  L   G       L  +M      F   C PN VT
Sbjct: 278 AFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM------FSEKCDPNVVT 331

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +I  LC++G +++A  L   MK++ + P+  +Y+ LI  FC     + A      M+
Sbjct: 332 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 391

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF------- 175
             G  P++V++N ++  LCKNGK D+A  +   + ++G  PN+  YNT+           
Sbjct: 392 SDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKI 451

Query: 176 ----------------------------CLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
                                       C  G V++A EL V M S     +V +Y+I++
Sbjct: 452 RALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVL 511

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL-FEIHQVERAFKLFDEMQR 263
            G+CK   IE A+ +   M+  G +P+   Y  L  G+ F  ++ E A +L +++ R
Sbjct: 512 LGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAE-AMELANDLVR 567



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 100/187 (53%), Gaps = 7/187 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F KL   GC PN  +YNT+ + L  +G  I AL++  EM + NG       P+ +
Sbjct: 417 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVS-NG-----IDPDEI 470

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I  LC+EG VDKA EL + M+    +P+VVTYN ++ GFC A+   +A  +   M
Sbjct: 471 TYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSM 530

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +PN  ++ V++  +   G   EA  L   +++I    + + +  L   F L   +
Sbjct: 531 VGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINA-ISEYSFKRLHRTFPLLNVL 589

Query: 182 NRAEELF 188
            R+ + F
Sbjct: 590 QRSSQTF 596



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 10/132 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  + +++   G +P+  TYN++I+ LCR G    A  L  +M   + EF     P+ 
Sbjct: 451 IRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMR--SCEF----HPSV 504

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  ++ G CK   ++ A ++   M      PN  TY  LI G  +A    EA    +E
Sbjct: 505 VTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEA----ME 560

Query: 121 MMDQGVQPNVVS 132
           + +  V+ N +S
Sbjct: 561 LANDLVRINAIS 572


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 188/386 (48%), Gaps = 41/386 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V T+N LI+   R G    A+ L + MAN         KP  VTY +++ GLCK    
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRG------LKPGIVTYNSVLKGLCKHRRF 243

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKAKE+F  M   ++ P+V ++N LI GFC   +  EA   + EM  + V P+VVSF+ +
Sbjct: 244 DKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL 303

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    + G+MD A   L  M  +G+ P+  +Y  ++ GFC  G ++ A  +   M   GC
Sbjct: 304 IGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGC 363

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+NG CK   +  A  L +EM  +G+ PD+  + TL  G       E A +
Sbjct: 364 LPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQ 423

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-------LKYEL------ 303
           LFD + R  +  D   Y + IDG+C+ G + +A EL+  +         + Y +      
Sbjct: 424 LFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHC 483

Query: 304 ----------------------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
                                 +IR YN +I G C+SG +K   +  + + +  +  D++
Sbjct: 484 EKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLI 543

Query: 342 TYNIMIHALCADGKMDKARDLFLDME 367
           T+N +IH    +  M  A ++F  ME
Sbjct: 544 TFNTLIHGYIKEENMHGAFNVFNIME 569



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 179/344 (52%), Gaps = 6/344 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E N +T N +++  C+T     A  +  EM            P+ VT+  +ID   + G 
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADTVISEMEK------RCVFPDVVTHNVLIDARFRAGD 207

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A  L   M +  + P +VTYNS++ G C    +++AK +F  M    V P+V SFN+
Sbjct: 208 VDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNI 267

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++   C+ G++ EA +  + M    V P+   ++ L+  F   G ++ A      M+ +G
Sbjct: 268 LIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLG 327

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +   Y+++I G+C+   +  AL +  EM+  G  PDVV YNTL  GL + H++  A 
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAE 387

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           KL +EM+  GV  D   + T I G C+ G    A++LF TL   +   D+  YN LIDG+
Sbjct: 388 KLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGM 447

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           C+ G L  A EL+  +    ++ + +TY+I+I + C  G+++ A
Sbjct: 448 CRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDA 491



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 185/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +      P+V ++N LI G CR G    A+  ++EM +          P+ V
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQH------RYVTPDVV 298

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +++ +I    + G +D A     +MK   + P+ V Y  +I GFC A   +EA  +  EM
Sbjct: 299 SFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEM 358

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++N ++N LCK  ++ +A +LL  M + GV P+   + TL+ G+C  G  
Sbjct: 359 VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNF 418

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF ++     + +V +Y+ LI+G C+  ++  A  L+ +M ++ I P+ + Y+ L
Sbjct: 419 ENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSIL 478

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E  QVE AF   DEM + G   +   Y + I G C++G + +  +  + +R    
Sbjct: 479 IDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNV 538

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  +N LI G  K   +  A+ +F  + + ++  D VTYN++I+     G M  A  
Sbjct: 539 FPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGR 598

Query: 362 LFLDM 366
           +F  M
Sbjct: 599 VFKGM 603



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 164/336 (48%), Gaps = 37/336 (11%)

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           L + G+   A+E +  +   +   N  T N ++H +C   +++ A  +  EM  + V P+
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VV+ NV+++   + G +D A  L++ M   G++P    YN+++ G C   R ++A+E+F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           +M+      +V S++ILI G+C+  E++ A+  Y EM  + + PDVV ++ L IGLF   
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCL-IGLFSRR 310

Query: 250 ------------------------------------QVERAFKLFDEMQRHGVAADTWAY 273
                                                +  A ++ DEM   G   D   Y
Sbjct: 311 GEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTY 370

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            T ++GLCK   +++A +L   +       D+  +  LI G C+ G  + A +LF +L R
Sbjct: 371 NTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR 430

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             L  DVVTYN +I  +C  G + KA +L+ DM A+
Sbjct: 431 QRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAR 466



 Score =  147 bits (371), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/269 (30%), Positives = 142/269 (52%), Gaps = 6/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++   G  P++ T+ TLI+G CR G+   AL LF+ +           +P+ 
Sbjct: 384 LDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQR------LRPDV 437

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY ++IDG+C++G + KA EL+  M    I PN +TY+ LI   C      +A     E
Sbjct: 438 VTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDE 497

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  PN+ ++N I+   C++G + +  + L+ M Q  V P+   +NTL+ G+     
Sbjct: 498 MVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEEN 557

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +F  ME    + +  +Y+++ING+ +   ++ A  ++  M   GI+PD   Y +
Sbjct: 558 MHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMS 617

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           L  G       ++AF+L DEM   G A D
Sbjct: 618 LINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 2/242 (0%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           QP V  F++++    ++ K  EA     L++   V   A   N L+      G  + A+E
Sbjct: 86  QPQV--FDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
            +  + S   + N ++ +I+++ YCK  E +GA ++ SEM  + + PDVV +N L    F
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARF 203

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
               V+ A  L D M   G+      Y + + GLCK+    +A E+FRT+       D+R
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ++N LI G C+ G +K A + ++ +    +  DVV+++ +I      G+MD A     +M
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREM 323

Query: 367 EA 368
           + 
Sbjct: 324 KG 325



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 133/280 (47%)

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
           +E+   +   +  P    ++ LI  +  +    EA   F  ++D  V     + N ++  
Sbjct: 72  REIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAV 131

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L + G    A     L++      NA+  N ++  +C T   + A+ +   ME      +
Sbjct: 132 LSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPD 191

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V ++++LI+   +  +++ A++L   M ++G+KP +V YN++  GL +  + ++A ++F 
Sbjct: 192 VVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFR 251

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M +  VA D  ++   I G C+ G + EAV+ ++ ++      D+ +++CLI    + G
Sbjct: 252 TMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRG 311

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +  A    R +    L+ D V Y ++I   C  G M +A
Sbjct: 312 EMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/403 (30%), Positives = 194/403 (48%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++     +PNV  Y  LI+G  R G+   A  + +EM           +PN +
Sbjct: 310 EAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG------VQPNKI 363

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLCK G +D+A  L  +M  ++  P+ +TYN +I G    +   +A  L  EM
Sbjct: 364 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 423

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL---- 177
            + G+ PNV +++++++ LC++G+ ++AS LLE M   G++PNAFVY  L+ G+C     
Sbjct: 424 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 483

Query: 178 -------------------------------TGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                           GRV  + + F  M+  G   N F+YS L
Sbjct: 484 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 543

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GY KN ++E A  L   ML  G+KP+ VIY  L    F+   +E+    F  M   GV
Sbjct: 544 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 603

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y   I  L  +G +  A  +   +       D+  Y+ LI GLCK+   + A+ 
Sbjct: 604 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 663

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +   + +  +  ++V YN +I  LC  G +  AR++F  + AK
Sbjct: 664 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 706



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 188/345 (54%), Gaps = 7/345 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  + +++R  GC  N  TYN LI GLCR+G    A    ++M     ++G+V  P+  T
Sbjct: 241 AKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME----DYGLV--PDGFT 294

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+GLCK    ++AK L  +M    + PNVV Y +LI GF    + +EA  +  EM+
Sbjct: 295 YGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMV 354

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GVQPN ++++ ++  LCK G+MD AS LL+ M++   RP+   YN +++G        
Sbjct: 355 AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKK 414

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   ME+ G   NV++YSI+I+G C++ E E A  L  EM +KG+KP+  +Y  L 
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLI 474

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G      V  A ++FD+M +  V  D + Y + I GL K G + E+ + F  ++     
Sbjct: 475 SGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLL 534

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIM 346
            +   Y+ LI G  K+G L+ A +L  R L  G+   DV+  +++
Sbjct: 535 PNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLL 579



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV+TY+ +I+GLC++G    A +L EEM           KPN  
Sbjct: 415 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAF 468

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C+EG V  A E+F KM   N+ P++  YNSLI G        E+   F +M
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN  +++ +++   KNG ++ A +L++ M+  G++PN  +Y  L++ +  +  +
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +    F SM   G   +   Y ILI+    +  +E A  + S +   G  PDV +Y++L
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 648

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +    E+AF + DEM + GV  +   Y   IDGLCK+G I  A  +F ++     
Sbjct: 649 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 708

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   Y  LIDG CK G +  A+ L+  +    +  D   Y+++     + G +++A  
Sbjct: 709 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 768

Query: 362 LFLDM 366
           L  +M
Sbjct: 769 LIEEM 773



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 167/311 (53%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C  NTVTY  +I GLC+ G V++A      M+D  + P+  TY +LI+G C +   NEAK
Sbjct: 253 CGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAK 312

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  EM    ++PNVV +  +++   + G  DEA ++++ M+  GV+PN   Y+ L+ G 
Sbjct: 313 ALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGL 372

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G+++RA  L   M     + +  +Y+++I G+ ++   + A  L SEM + GI P+V
Sbjct: 373 CKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNV 432

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             Y+ +  GL +  + E+A  L +EM   G+  + + Y   I G C+ G +  A E+F  
Sbjct: 433 YTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDK 492

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +    D+  YN LI GL K GR++ + + F  +    L+ +  TY+ +IH    +G 
Sbjct: 493 MTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGD 552

Query: 356 MDKARDLFLDM 366
           ++ A  L   M
Sbjct: 553 LESAEQLVQRM 563



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 197/403 (48%), Gaps = 42/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ L  ++   G +PN F Y  LI+G CR G+  +A  +F++M   N        P+  
Sbjct: 450 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN------VLPDLY 503

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y ++I GL K G V+++ + F +M++  + PN  TY+ LIHG+    D   A+ L   M
Sbjct: 504 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 563

Query: 122 MDQGVQPNVVSF-----------------------------------NVIMNELCKNGKM 146
           +D G++PN V +                                    ++++ L  +G M
Sbjct: 564 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 623

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           + A R+L  + + G  P+  VY++L+ G C T    +A  +   M   G   N+  Y+ L
Sbjct: 624 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 683

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK+ +I  A ++++ +L+KG+ P+ V Y +L  G  ++  +  AF L++EM   G+
Sbjct: 684 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 743

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D + Y     G    G + +A+ L   +  L+    I ++N L+DG CK G+++   +
Sbjct: 744 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETLK 802

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   +    L+ + +T   +I  L   GK+ +   +F++++ K
Sbjct: 803 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 845



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 160/307 (52%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + + ++  CK    D AK++ ++M++     N VTYN LI G C +    EA     +M 
Sbjct: 225 HGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDME 284

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D G+ P+  ++  ++N LCK+ + +EA  LL+ M    ++PN  VY  L+DGF   G  +
Sbjct: 285 DYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNAD 344

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++   M + G + N  +Y  L+ G CK  +++ A  L  +M+    +PD + YN + 
Sbjct: 345 EAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLII 404

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F  H  + AF+L  EM+  G++ + + Y   I GLC++G   +A +L   +     +
Sbjct: 405 EGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLK 464

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   Y  LI G C+ G + +A E+F  + +  ++ D+  YN +I  L   G+++++   
Sbjct: 465 PNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKY 524

Query: 363 FLDMEAK 369
           F  M+ +
Sbjct: 525 FAQMQER 531



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 167/344 (48%), Gaps = 34/344 (9%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y  LI+ L  +G+   A  +   +   NG       P+   Y+++I GLCK    +KA  
Sbjct: 610 YGILIHNLSSSGNMEAAFRVLSGIEK-NGSV-----PDVHVYSSLISGLCKTADREKAFG 663

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +  +M  + ++PN+V YN+LI G C + D + A+ +F  ++ +G+ PN V++  +++  C
Sbjct: 664 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 723

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA----EELFVSMESMGCK 197
           K G +  A  L   M+  G+ P+AFVY+ L  G    G + +A    EE+F+   +    
Sbjct: 724 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA---- 779

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ S++ L++G+CK  +++  L L   ++ +G+ P+ +    +  GL E  ++     +
Sbjct: 780 -SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 838

Query: 258 FDEMQRHGVAADTWAYRT-FIDGL-----------------CKNGYIVEAVELFRTLRIL 299
           F E+Q+    +    + + F+D +                 CK G + +A+ L   +   
Sbjct: 839 FVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAK 898

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVT 342
              +   +Y  ++D LC+ G+L  A  L + +  RG L   +V 
Sbjct: 899 SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTLVA 942



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 29/210 (13%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYT 64
           L+ ++   G  P+ F Y+ L  G    G    A+ L EEM   G+            ++ 
Sbjct: 734 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS--------SFN 785

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE---- 120
            ++DG CK G + +  +L   +    + PN +T  ++I G   A   +E   +F+E    
Sbjct: 786 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 845

Query: 121 ---------------MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
                          M++QG  P  V  ++I +  CK G +D+A  L ++++        
Sbjct: 846 TSESAARHFSSLFMDMINQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGC 904

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
             Y  ++D  C  G+++ A  L   M+  G
Sbjct: 905 SSYLAIVDNLCRKGKLSEALNLLKEMDKRG 934


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/403 (31%), Positives = 196/403 (48%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++     +PNV  Y  LI+G  R G+   A  + +EM       GV  +PN +
Sbjct: 332 EAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAA----GV--QPNKI 385

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLCK G +D+A  L  +M  ++  P+ +TYN +I G    +   +A  L  EM
Sbjct: 386 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 445

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL---- 177
            + G+ PNV +++++++ LC++G+ ++AS LLE M   G++PNAFVY  L+ G+C     
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505

Query: 178 -------------------------------TGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                           GRV  + + F  M+  G   N F+YS L
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 565

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GY KN ++E A  L   ML  G+KP+ VIY  L    F+   +E+    F  M   GV
Sbjct: 566 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y   I  L  +G +  A  +   +       D+  Y+ LI GLCK+   + A+ 
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 685

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +   + +  +  ++V YN +I  LC  G +  AR++F  + AK
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 728



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 194/369 (52%), Gaps = 10/369 (2%)

Query: 2   EAAALFMKLRVF----GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           +A AL  K+R F    G  P+V+TY+TLI   C+      A  +  EM     E G  C 
Sbjct: 223 DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMR----ERG--CG 276

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            NTVTY  +I GLC+ G V++A      M+D  + P+  TY +LI+G C +   NEAK L
Sbjct: 277 LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKAL 336

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM    ++PNVV +  +++   + G  DEA ++++ M+  GV+PN   Y+ L+ G C 
Sbjct: 337 LDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCK 396

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+++RA  L   M     + +  +Y+++I G+ ++   + A  L SEM + GI P+V  
Sbjct: 397 MGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYT 456

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+ +  GL +  + E+A  L +EM   G+  + + Y   I G C+ G +  A E+F  + 
Sbjct: 457 YSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMT 516

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +    D+  YN LI GL K GR++ + + F  +    L+ +  TY+ +IH    +G ++
Sbjct: 517 KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLE 576

Query: 358 KARDLFLDM 366
            A  L   M
Sbjct: 577 SAEQLVQRM 585



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  PNV+TY+ +I+GLC++G    A +L EEM           KPN  
Sbjct: 437 DAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKG------LKPNAF 490

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C+EG V  A E+F KM   N+ P++  YNSLI G        E+   F +M
Sbjct: 491 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 550

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN  +++ +++   KNG ++ A +L++ M+  G++PN  +Y  L++ +  +  +
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +    F SM   G   +   Y ILI+    +  +E A  + S +   G  PDV +Y++L
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSL 670

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +    E+AF + DEM + GV  +   Y   IDGLCK+G I  A  +F ++     
Sbjct: 671 ISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGL 730

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   Y  LIDG CK G +  A+ L+  +    +  D   Y+++     + G +++A  
Sbjct: 731 VPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMF 790

Query: 362 LFLDM 366
           L  +M
Sbjct: 791 LIEEM 795



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 186/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA + + +R  G  P++   N L+  L R     +   + E M       G    P+  
Sbjct: 192 DAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFM------VGAGISPDVY 245

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+I+  CK    D AK++ ++M++     N VTYN LI G C +    EA     +M
Sbjct: 246 TYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM 305

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+  ++  ++N LCK+ + +EA  LL+ M    ++PN  VY  L+DGF   G  
Sbjct: 306 EDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNA 365

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M + G + N  +Y  L+ G CK  +++ A  L  +M+    +PD + YN +
Sbjct: 366 DEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLI 425

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F  H  + AF+L  EM+  G++ + + Y   I GLC++G   +A +L   +     
Sbjct: 426 IEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGL 485

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +   Y  LI G C+ G + +A E+F  + +  ++ D+  YN +I  L   G+++++  
Sbjct: 486 KPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTK 545

Query: 362 LFLDMEAK 369
            F  M+ +
Sbjct: 546 YFAQMQER 553



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 197/403 (48%), Gaps = 42/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ L  ++   G +PN F Y  LI+G CR G+  +A  +F++M   N        P+  
Sbjct: 472 KASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVN------VLPDLY 525

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y ++I GL K G V+++ + F +M++  + PN  TY+ LIHG+    D   A+ L   M
Sbjct: 526 CYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRM 585

Query: 122 MDQGVQPNVVSF-----------------------------------NVIMNELCKNGKM 146
           +D G++PN V +                                    ++++ L  +G M
Sbjct: 586 LDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNM 645

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           + A R+L  + + G  P+  VY++L+ G C T    +A  +   M   G   N+  Y+ L
Sbjct: 646 EAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNAL 705

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK+ +I  A ++++ +L+KG+ P+ V Y +L  G  ++  +  AF L++EM   G+
Sbjct: 706 IDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGI 765

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D + Y     G    G + +A+ L   +  L+    I ++N L+DG CK G+++   +
Sbjct: 766 TPDAFVYSVLTTGCSSAGDLEQAMFLIEEM-FLRGHASISSFNNLVDGFCKRGKMQETLK 824

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   +    L+ + +T   +I  L   GK+ +   +F++++ K
Sbjct: 825 LLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 146/304 (48%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++D   K G V  A E+ L M+D  + P++   N+L+     A+       +   M+  G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+V +++ ++   CK  + D A ++L  M + G   N   YN L+ G C +G V  A 
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
                ME  G   + F+Y  LING CK++    A +L  EM    +KP+VV+Y  L  G 
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                 + AFK+  EM   GV  +   Y   + GLCK G +  A  L + +    +  D 
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I+G  +    K A+ L   +    +  +V TY+IMIH LC  G+ +KA DL  +
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479

Query: 366 MEAK 369
           M  K
Sbjct: 480 MTTK 483



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 165/337 (48%), Gaps = 34/337 (10%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y  LI+ L  +G+   A  +   +   NG       P+   Y+++I GLCK    +KA  
Sbjct: 632 YGILIHNLSSSGNMEAAFRVLSGIEK-NGSV-----PDVHVYSSLISGLCKTADREKAFG 685

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +  +M  + ++PN+V YN+LI G C + D + A+ +F  ++ +G+ PN V++  +++  C
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA----EELFVSMESMGCK 197
           K G +  A  L   M+  G+ P+AFVY+ L  G    G + +A    EE+F+   +    
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA---- 801

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ S++ L++G+CK  +++  L L   ++ +G+ P+ +    +  GL E  ++     +
Sbjct: 802 -SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTI 860

Query: 258 FDEMQRHGVAADTWAYRT-FIDGL-----------------CKNGYIVEAVELFRTLRIL 299
           F E+Q+    +    + + F+D +                 CK G + +A+ L   +   
Sbjct: 861 FVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAK 920

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGV 335
              +   +Y  ++D LC+ G+L  A  L + +  RG+
Sbjct: 921 SAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGI 957



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 119/273 (43%), Gaps = 60/273 (21%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PN+  YN LI+GLC++G    A N+F  +       G+V  PN VTYT++IDG CK 
Sbjct: 694 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK----GLV--PNCVTYTSLIDGSCKV 747

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A  L+ +M    I P+   Y+ L  G   A D  +A  L  EM  +G   ++ SF
Sbjct: 748 GDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSF 806

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE-------- 185
           N +++  CK GKM E  +LL +++  G+ PNA     ++ G    G+++           
Sbjct: 807 NNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQ 866

Query: 186 -----------ELFVSMESMG--------------CKHNVF------------------- 201
                       LF+ M + G              CK                       
Sbjct: 867 KTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGC 926

Query: 202 -SYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            SY  +++  C+  ++  AL+L  EM  +GI P
Sbjct: 927 SSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP 959



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 127/322 (39%), Gaps = 56/322 (17%)

Query: 83  FLKMKDENINPNVVTYNSLIH---GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
           F       + P+    ++  H     C  + +N A  L I+M+     P VV    I   
Sbjct: 107 FFYWSSPQLAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYPSPPVV-LASIHRA 165

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME------- 192
           L  +G    A                 V + L+D +  +GRV  A E+ + M        
Sbjct: 166 LSDSGHRSPA-----------------VLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPS 208

Query: 193 ----------------------------SMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
                                         G   +V++YS LI  YCK +E + A  +  
Sbjct: 209 IRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLV 268

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           EM  +G   + V YN L  GL     VE AF    +M+ +G+  D + Y   I+GLCK+ 
Sbjct: 269 EMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSR 328

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              EA  L   +   + + ++  Y  LIDG  + G    A+++ + +    +  + +TY+
Sbjct: 329 RSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYD 388

Query: 345 IMIHALCADGKMDKARDLFLDM 366
            ++  LC  G+MD+A  L   M
Sbjct: 389 NLVRGLCKMGQMDRASLLLKQM 410



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 49/210 (23%), Positives = 88/210 (41%), Gaps = 29/210 (13%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYT 64
           L+ ++   G  P+ F Y+ L  G    G    A+ L EEM   G+            ++ 
Sbjct: 756 LYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHASIS--------SFN 807

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE---- 120
            ++DG CK G + +  +L   +    + PN +T  ++I G   A   +E   +F+E    
Sbjct: 808 NLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQK 867

Query: 121 ---------------MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
                          M++QG  P  V  ++I +  CK G +D+A  L ++++        
Sbjct: 868 TSESAARHFSSLFMDMINQGKIPLDVVDDMIRDH-CKEGNLDKALMLRDVIVAKSAPMGC 926

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
             Y  ++D  C  G+++ A  L   M+  G
Sbjct: 927 SSYLAIVDNLCRKGKLSEALNLLKEMDKRG 956


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 194/391 (49%), Gaps = 41/391 (10%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F K+   G    V++YN++IN  C+ G   +A  LF+EM +         KP   TYT++
Sbjct: 423 FNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKG------LKPTVATYTSL 476

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I G CK+G V KA +L+ +M  + I PN VT+ +LI G C  N   EA  LF EM++  +
Sbjct: 477 ISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKI 536

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            PN V++NV++   C+ G    A  LL+ MI+ G+ P+ + Y  L+ G C TGRV+ A+E
Sbjct: 537 LPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKE 596

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL-------------------------- 220
               +     + +   Y+ L+ G+CK   I+ AL                          
Sbjct: 597 FINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGAL 656

Query: 221 --------SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
                    L  EM  KG++PD VIY  L  G  +   +++AF+ +  M   G   ++  
Sbjct: 657 NQNDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVT 716

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   ++GL K GY+ EA  LF+ + + +   +   Y C +D L K G ++ A +L  ++ 
Sbjct: 717 YTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAML 776

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +G   A+ VTYNI+I   C  GK  +A  L 
Sbjct: 777 QGSF-ANTVTYNILIRGYCQIGKFQEAAKLL 806



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 185/381 (48%), Gaps = 41/381 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   L   G + ++ TY TL+ GLCR     V + + +EM     E G V  P+  
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMI----ELGYV--PSEA 331

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             + +I+GL K G ++ A EL  K+    + PN+  YNS+I+  C      EA+ LF  M
Sbjct: 332 AVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVM 391

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ PN V++ ++++   +  K+D A      MI+ G+    + YN++++  C  G++
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKM 451

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE LF  M   G K  V +Y+ LI+GYCK+  +  A  LY EM  KGI P+ V +  L
Sbjct: 452 KMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTAL 511

Query: 242 FIGLFEIHQVE-----------------------------------RAFKLFDEMQRHGV 266
             GL +I+++                                    RAF+L DEM + G+
Sbjct: 512 ICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGL 571

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + DT+ YR  I GLC  G + EA E    L      LD   Y  L+ G CK GR+K A  
Sbjct: 572 SPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALV 631

Query: 327 LFRSLPRGVLIADVVTYNIMI 347
             + +    L  D+V+Y ++I
Sbjct: 632 ARQEMVGRGLQMDLVSYAVLI 652



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  ++ TYN  INGLC++     A+    E+    GE G+  K + VTY T++ GLC+ 
Sbjct: 255 GCSLSIVTYNVFINGLCKSKRVWEAV----EVKRSLGEKGL--KADLVTYCTLVLGLCRI 308

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              +   E+  +M +    P+    + LI G         A  L  ++   GV PN+  +
Sbjct: 309 QEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVY 368

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LCK GK++EA  L  +M + G+ PN   Y  L+DGF    +++ A   F  M  
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIE 428

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    V+SY+ +IN  CK  +++ A  L+ EM+ KG+KP V  Y +L  G  +   V +
Sbjct: 429 CGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPK 488

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AFKL+ EM   G+A +T  +   I GLC+   + EA +LF  +  LK   +   YN LI+
Sbjct: 489 AFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIE 548

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G C+ G    A+EL   + +  L  D  TY  +I  LC+ G++ +A++   D+  K
Sbjct: 549 GHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHK 604



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 183/369 (49%), Gaps = 16/369 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ LF ++      PN  TYN LI G CR G+T  A  L +EM            P+T 
Sbjct: 523 EASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKG------LSPDTY 576

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLC  G V +AKE    +  ++   + + Y +L+ GFC      EA     EM
Sbjct: 577 TYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEM 636

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQI---GVRPNAFVYNTLMDGFCL 177
           + +G+Q ++VS+ V+++     G +++  R+L EL+ ++   G++P+  +Y  L+DGF  
Sbjct: 637 VGRGLQMDLVSYAVLIS-----GALNQNDRILFELLREMHGKGMQPDNVIYTILIDGFIK 691

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           +G + +A E +  M   G   N  +Y+ L+NG  K   +  A  L+  ML     P+ + 
Sbjct: 692 SGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHIT 751

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y      L +   +E A +L + M + G  A+T  Y   I G C+ G   EA +L   + 
Sbjct: 752 YGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMI 810

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            +    D   Y+  I   CK G +  A +++  + +  L  D V +N +IHA C +G++D
Sbjct: 811 GIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELD 870

Query: 358 KARDLFLDM 366
           +A  L  DM
Sbjct: 871 RALQLRNDM 879



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 137/275 (49%), Gaps = 8/275 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + ++ +Y  LI+G       I+   L  EM +G G      +P+ V YT +IDG  K 
Sbjct: 640 GLQMDLVSYAVLISGALNQNDRIL-FELLREM-HGKG-----MQPDNVIYTILIDGFIKS 692

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + KA E +  M  E   PN VTY +L++G   A   NEAK LF  M+     PN +++
Sbjct: 693 GNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITY 752

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
              ++ L K G M+ A +L   M+Q G   N   YN L+ G+C  G+   A +L   M  
Sbjct: 753 GCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIG 811

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   +  +YS  I  YCK   ++ A+ ++  ML +G+KPD V++N L        +++R
Sbjct: 812 IGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDR 871

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           A +L ++M   G+      Y + +  L +   + +
Sbjct: 872 ALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLTQ 906



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 158/344 (45%), Gaps = 35/344 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P   T + +++ L +     +  ELF  + +  + P+   Y  ++   C   D+N+AK +
Sbjct: 188 PEVRTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEI 247

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS--------------------------- 150
             +    G   ++V++NV +N LCK+ ++ EA                            
Sbjct: 248 INQAEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCR 307

Query: 151 --------RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
                    +++ MI++G  P+    + L++G    G +  A EL   +  +G   N+F 
Sbjct: 308 IQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFV 367

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ +IN  CK  ++E A  L+S M  +G+ P+ V Y  L  G     +++ AF  F++M 
Sbjct: 368 YNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMI 427

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G++A  ++Y + I+  CK G +  A  LF+ +     +  +  Y  LI G CK G + 
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A++L+  +    +  + VT+  +I  LC   KM +A  LF +M
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEM 531



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 116/237 (48%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F++++    +N ++ +   ++ LM   G+ P     + L++      +  +  ELF ++ 
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           + G K + + Y++++   C+ K+   A  + ++    G    +V YN    GL +  +V 
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++   +   G+ AD   Y T + GLC+       +E+   +  L Y     A + LI
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +GL K G ++ A+EL   + +  ++ ++  YN MI++LC  GK+++A  LF  M  +
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAER 394



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 94/184 (51%), Gaps = 7/184 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++ V    PN  TY   ++ L + G+   AL L   M  G+         NTV
Sbjct: 732 EAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGSF-------ANTV 784

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G C+ G   +A +L   M    + P+ +TY++ I+ +C   + + A  ++  M
Sbjct: 785 TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECM 844

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+ V FN +++  C NG++D A +L   M+  G++P    Y++LM       R+
Sbjct: 845 LQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904

Query: 182 NRAE 185
            + +
Sbjct: 905 TQVQ 908



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/150 (29%), Positives = 72/150 (48%), Gaps = 6/150 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A       + G   N  TYN LI G C+ G    A  L + M       G+   P+ 
Sbjct: 765 MENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVM------IGIGMVPDC 818

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY+T I   CK G VD A +++  M    + P+ V +N LIH  C   + + A  L  +
Sbjct: 819 ITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRND 878

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           MM +G++P   +++ +M +L +  ++ +  
Sbjct: 879 MMLRGLKPTQSTYHSLMVQLAQRARLTQVQ 908


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 192/351 (54%), Gaps = 6/351 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           ++ TYNTLI+G C+ G    A  + E M   +        PN +T+ +++ GLCK   + 
Sbjct: 245 SIVTYNTLIDGYCKVGELDAAFKMRERMKEKS------VAPNIITFNSLLSGLCKMRKMK 298

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+ L  +M+     P+  TY+ L  G    +D N A  L+ +  ++G++ N  + ++++
Sbjct: 299 EARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILL 358

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK GK+++A  +L+   + G+  +  +YNT ++G+C  G +N+A      MES G +
Sbjct: 359 NGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLR 418

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  +++ LI+ +C  KE++ A     +M  KG+ P V  YNTL  G  ++   +R F++
Sbjct: 419 PNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQI 478

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            ++M+  GV  +  +Y + I+ LCK+G I+EA  + R +       + + YN LIDG C 
Sbjct: 479 LEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCM 538

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            G++K A   F  + R  +   +VTYN++I  LC  GK+ +A D    + +
Sbjct: 539 VGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITS 589



 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 205/428 (47%), Gaps = 76/428 (17%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G  PNVF YN LI GLCR      A  +F+EM N N    +V      TY T+IDG
Sbjct: 202 MRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIV------TYNTLIDG 255

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM-------- 121
            CK G +D A ++  +MK++++ PN++T+NSL+ G C      EA+ L  EM        
Sbjct: 256 YCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPD 315

Query: 122 ---------------------------MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
                                       ++G++ N  + ++++N LCK GK+++A  +L+
Sbjct: 316 GYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILK 375

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
              + G+  +  +YNT ++G+C  G +N+A      MES G + N  +++ LI+ +C  K
Sbjct: 376 KFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMK 435

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           E++ A     +M  KG+ P V  YNTL  G  ++   +R F++ ++M+  GV  +  +Y 
Sbjct: 436 EMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYG 495

Query: 275 TFIDGLCKNGYIVEAVELFRTL---------------------------------RILKY 301
           + I+ LCK+G I+EA  + R +                                  +++ 
Sbjct: 496 SLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRS 555

Query: 302 ELD--IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           E+   +  YN LIDGLCK G+L  A +    +       DV+TYN +I      G + K 
Sbjct: 556 EISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKC 615

Query: 360 RDLFLDME 367
             L+  M+
Sbjct: 616 LGLYETMK 623



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 191/354 (53%), Gaps = 8/354 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  ++ V G  P+ +TY+ L +GL R      A+ L+E+      E G+  + N  
Sbjct: 299 EARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT----EKGI--RINNY 352

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +++GLCK+G V+KA+E+  K  +  +  + V YN+ ++G+C   D N+A  L IE 
Sbjct: 353 TGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKA-ILTIER 411

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G++PN ++FN ++++ C   +MD+A   ++ M + GV P+   YNTL+DG+     
Sbjct: 412 MESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCT 471

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +R  ++   ME +G K NV SY  LIN  CK+ +I  A  +  +M+ +G+ P+  +YN 
Sbjct: 472 FDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNM 531

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   + +V+ A + FDEM R  ++     Y   IDGLCK G + EA +    +    
Sbjct: 532 LIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSG 591

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           +  D+  YN LI G   +G +     L+ ++    +   V TY+ +I     +G
Sbjct: 592 HSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG 645



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 107/368 (29%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     K+   G  P+V TYNTLI+G  +         + E+M     E GV  KPN V
Sbjct: 439 KAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQME----EIGV--KPNVV 492

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y ++I+ LCK+G + +A+ +   M    + PN   YN LI G C      +A   F EM
Sbjct: 493 SYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEM 552

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M   + P +V++NV+++ LCK GK+ EA   L  +   G  P+   YN+L+ G+   G V
Sbjct: 553 MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNV 612

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++   L+ +M+++G K  V +Y  LI+G C  + IE    LY+EML   + PD V+YN +
Sbjct: 613 SKCLGLYETMKNLGIKPTVRTYHPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAM 671

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                EI   ++A+ L   M   G+  D   Y + I G  + G +    +L   ++  + 
Sbjct: 672 IHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKEL 731

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 Y+ L+ G C       A+  +R +     + +    N +   L  +G++ + + 
Sbjct: 732 APKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQV 791

Query: 362 LFLDMEAK 369
           +  +M  K
Sbjct: 792 ICSEMNVK 799



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 138/292 (47%)

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K  +LF+++++     +   Y   I       +          M  +GV+PNV  +NV++
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLI 218

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC+  ++ +A ++ + M  I +  +   YNTL+DG+C  G ++ A ++   M+     
Sbjct: 219 GGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVA 278

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N+ +++ L++G CK ++++ A SL  EM   G  PD   Y+ LF GL        A +L
Sbjct: 279 PNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMEL 338

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           +++    G+  + +     ++GLCK G + +A E+ +         D   YN  ++G C+
Sbjct: 339 YEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCR 398

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G +  A      +    L  + +T+N +I   C   +MDKA +    M  K
Sbjct: 399 IGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEK 450



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 142/318 (44%), Gaps = 45/318 (14%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +   +   G  PN   YN LI+G C  G    AL  F+EM            P  
Sbjct: 508 LEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE------ISPTL 561

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC---- 116
           VTY  +IDGLCK+G + +A++   ++     +P+V+TYNSLI G  YAN  N +KC    
Sbjct: 562 VTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISG--YANAGNVSKCLGLY 619

Query: 117 --------------------------------LFIEMMDQGVQPNVVSFNVIMNELCKNG 144
                                           L+ EM+   + P+ V +N +++   + G
Sbjct: 620 ETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIG 679

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
              +A  L + M+  G+ P+   YN+L+ G    G+++  ++L  +M++        +Y 
Sbjct: 680 NTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYD 739

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           IL+ G+C  K+  GA   Y EM+     P+  I N L  GL +  +++    +  EM   
Sbjct: 740 ILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVK 799

Query: 265 GVAADTWAYRTFIDGLCK 282
           G+  + W  +  I  + K
Sbjct: 800 GI-INHWPSKEEISAVAK 816



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 107/223 (47%), Gaps = 2/223 (0%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  CK+  + EA  L E M + G  P+    + L        +  +  +LF+ +E+
Sbjct: 110 DMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIEN 169

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + + F Y+  I    K + ++  +     M  +G++P+V IYN L  GL    ++  
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K+FDEM    +      Y T IDG CK G +  A ++   ++      +I  +N L+ 
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL--CADG 354
           GLCK  ++K A  L + +     + D  TY+I+   L  C DG
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 92/192 (47%)

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C +  +  A EL+  M   G   ++ S S+L +     K+    + L+ E+ + G + D 
Sbjct: 117 CKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDT 176

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
            +Y        ++  ++   +  D M++ GV  + + Y   I GLC+   I +A ++F  
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +     I  YN LIDG CK G L  A+++   +    +  +++T+N ++  LC   K
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296

Query: 356 MDKARDLFLDME 367
           M +AR L  +ME
Sbjct: 297 MKEARSLLKEME 308


>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Glycine max]
          Length = 746

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/372 (31%), Positives = 190/372 (51%), Gaps = 12/372 (3%)

Query: 2   EAAALFMKLR------VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 55
           EA  +F +LR        G EP+V  +NTLI+GLC+ G     L+L EEM  GN     +
Sbjct: 334 EALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGN-----I 388

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
            +PNTVTY  +IDG  K G  D+A ELF +M +E + PNV+T N+L+ G C     + A 
Sbjct: 389 NRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAV 448

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
             F EM  +G++ N  ++  +++  C    ++ A +  E M+  G  P+A VY +L+ G 
Sbjct: 449 EFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGL 508

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C+ GR+N A  +   ++  G   +   Y++LI+G+CK K++E    L +EM   G+KPD 
Sbjct: 509 CIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDT 568

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + YNTL   L +      A K+ ++M + G+      Y   I   C    + E +++F  
Sbjct: 569 ITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGE 628

Query: 296 L-RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           +    K   +   YN LID LC++  +  A  L   +    +  +  TYN ++  +    
Sbjct: 629 MCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKK 688

Query: 355 KMDKARDLFLDM 366
            + KA +L   M
Sbjct: 689 MLHKAFELMDRM 700



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/356 (33%), Positives = 178/356 (50%), Gaps = 2/356 (0%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+V T+  L+N LC+      AL +F+ +    G   V  +P+ V + T+IDGLCK G 
Sbjct: 313 RPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGK 372

Query: 76  VDKAKELFLKMKDENIN-PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +    L  +MK  NIN PN VTYN LI GF  A +++ A  LF +M ++GVQPNV++ N
Sbjct: 373 EEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLN 432

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ LCK+G++  A      M   G++ NA  Y  L+  FC    +NRA + F  M S 
Sbjct: 433 TLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSS 492

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  +   Y  LI+G C    +  A  + S++   G   D   YN L  G  +  ++ER 
Sbjct: 493 GCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERV 552

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           ++L  EM+  GV  DT  Y T I  L K G    A ++   +        +  Y  +I  
Sbjct: 553 YELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHA 612

Query: 315 LCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            C    +    ++F  +     +  + V YNI+I ALC +  +D+A  L  DM+ K
Sbjct: 613 YCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVK 668



 Score =  147 bits (371), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 146/321 (45%), Gaps = 42/321 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF ++   G +PNV T NTL++GLC+ G    A+  F EM  G G      K N  
Sbjct: 411 RAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM-KGKG-----LKGNAA 464

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC----- 116
           TYT +I   C    +++A + F +M     +P+ V Y SLI G C A   N+A       
Sbjct: 465 TYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKL 524

Query: 117 ------------------------------LFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                                         L  EM + GV+P+ +++N +++ L K G  
Sbjct: 525 KLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDF 584

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSI 205
             AS+++E MI+ G+RP+   Y  ++  +C    V+   ++F  M S      N   Y+I
Sbjct: 585 ATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNI 644

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+  C+N +++ A+SL  +M  K ++P+   YN +  G+ +   + +AF+L D M    
Sbjct: 645 LIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA 704

Query: 266 VAADTWAYRTFIDGLCKNGYI 286
              D        + L   G I
Sbjct: 705 CRPDYITMEVLTEWLSAVGEI 725



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 155/326 (47%), Gaps = 11/326 (3%)

Query: 50  GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
           GE GV   P+    T ++  LC +     A E+   +       +  + N+L+       
Sbjct: 238 GERGVF--PDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLGRGR 295

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ------IGVRP 163
           D      L  EM  + ++P+VV+F +++N LCK  ++DEA ++ + +        +GV P
Sbjct: 296 DIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVGVEP 355

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC--KHNVFSYSILINGYCKNKEIEGALS 221
           +  ++NTL+DG C  G+      L   M+ MG   + N  +Y+ LI+G+ K    + A  
Sbjct: 356 DVVLFNTLIDGLCKVGKEEDGLSLLEEMK-MGNINRPNTVTYNCLIDGFFKAGNFDRAHE 414

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L+ +M  +G++P+V+  NTL  GL +  +V RA + F+EM+  G+  +   Y   I   C
Sbjct: 415 LFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFC 474

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
               I  A++ F  +       D   Y  LI GLC +GR+  A  +   L       D  
Sbjct: 475 GVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRS 534

Query: 342 TYNIMIHALCADGKMDKARDLFLDME 367
            YN++I   C   K+++  +L  +ME
Sbjct: 535 CYNVLISGFCKKKKLERVYELLTEME 560



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 126/257 (49%), Gaps = 7/257 (2%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  ++ ++GV P+      ++ +LC + K   A  +L  ++++G   +A   N L+    
Sbjct: 233 LVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTWLG 292

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK------G 230
               + R  EL   ME    + +V ++ IL+N  CK + I+ AL ++  +  K      G
Sbjct: 293 RGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNWVG 352

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTFIDGLCKNGYIVEA 289
           ++PDVV++NTL  GL ++ + E    L +EM+   +   +T  Y   IDG  K G    A
Sbjct: 353 VEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRA 412

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            ELFR +     + ++   N L+DGLCK GR+  A E F  +    L  +  TY  +I A
Sbjct: 413 HELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISA 472

Query: 350 LCADGKMDKARDLFLDM 366
            C    +++A   F +M
Sbjct: 473 FCGVNNINRAMQCFEEM 489



 Score =  110 bits (276), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 109/217 (50%), Gaps = 7/217 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ +  KL++ G   +   YN LI+G C+         L  EM     E GV  KP+T+
Sbjct: 516 DASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEME----ETGV--KPDTI 569

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I  L K G    A ++  KM  E + P+VVTY ++IH +C   + +E   +F EM
Sbjct: 570 TYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEM 629

Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                V PN V +N++++ LC+N  +D A  L+E M    VRPN   YN ++ G      
Sbjct: 630 CSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKM 689

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +++A EL   M    C+ +  +  +L        EIE
Sbjct: 690 LHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIE 726



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 85/179 (47%), Gaps = 7/179 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G +P+  TYNTLI+ L +TG    A  + E+M           +P+ VTY  
Sbjct: 555 LLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEG------LRPSVVTYGA 608

Query: 66  IIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           II   C +  VD+  ++F +M     + PN V YN LI   C  ND + A  L  +M  +
Sbjct: 609 IIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVK 668

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            V+PN  ++N I+  +     + +A  L++ M++   RP+      L +     G + +
Sbjct: 669 RVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEK 727


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 196/369 (53%), Gaps = 7/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  K+   G   N+FTYN  I GLC  G    A+ L + M      + V   P+ 
Sbjct: 206 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMR----AYAV---PDV 258

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I GLCK+    +A     +M ++   P+  TYN++I G+C  +   EA  L  +
Sbjct: 259 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 318

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ V++  ++N LC  G ++ A  L       G++P+  VYN+L+ G CL G 
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 378

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++   M   GC  ++ +Y+I+ING CK   I  A  + ++ + KG  PDV  +NT
Sbjct: 379 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 438

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +++ A +L + M  +G+A DT  Y + ++GLCK G + E  E F+ + +  
Sbjct: 439 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 498

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   YN LI+  C+S +++ A ++   + +  L  D V++N +I+  C +G ++ A 
Sbjct: 499 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 558

Query: 361 DLFLDMEAK 369
            LF  +E K
Sbjct: 559 LLFQKLEEK 567



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     ++   GC P+ FTYNT+I+G C+      A  L ++        G V  P+ V
Sbjct: 276 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQV 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+GLC EG V++A ELF + + + I P++V YNSL+ G C       A  +  EM
Sbjct: 330 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P++ ++N+++N LCK G + +A+ ++   I  G  P+ F +NTL+DG+C   ++
Sbjct: 390 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G   +  +Y+ ++NG CK  ++      + EM+ KG  P+ + YN L
Sbjct: 450 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                  +++E A K+  +M + G+  D  ++ T I G C+NG +  A  LF+ L    Y
Sbjct: 510 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 569

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 +N LI        + +A ++F  +      AD  TY ++I   C    +D+A  
Sbjct: 570 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 629

Query: 362 LFLDMEAK 369
             ++M  K
Sbjct: 630 HLVEMIKK 637



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 182/365 (49%), Gaps = 9/365 (2%)

Query: 4   AALFMKLRVFGCEPN--VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           A   + LR+    P+     Y T++ GL   GHT  A  LF++M + +        PN  
Sbjct: 137 ARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH------VFPNLA 190

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  ++  LCK G V +A  L  K+    ++ N+ TYN  I G C A    EA  L   M
Sbjct: 191 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 250

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+VV++N ++  LCK     EA   L  M+  G  P+ F YNT++DG+C    V
Sbjct: 251 RAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 309

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL       G   +  +Y  LING C   ++E AL L++E  +KGIKPD+V+YN+L
Sbjct: 310 QEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSL 369

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL     +  A ++ +EM   G   D   Y   I+GLCK G I +A  +     +  Y
Sbjct: 370 VKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGY 429

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  +N LIDG CK  +L  A +L   +    +  D +TYN +++ LC  GK+++  +
Sbjct: 430 LPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNE 489

Query: 362 LFLDM 366
            F +M
Sbjct: 490 TFQEM 494



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 182/368 (49%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +R +   P+V TYNTLI GLC+      A++    M N        C P+  
Sbjct: 242 EAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG------CLPDDF 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TIIDG CK   V +A EL      +   P+ VTY SLI+G C   D   A  LF E 
Sbjct: 295 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P++V +N ++  LC  G +  A +++  M + G  P+   YN +++G C  G +
Sbjct: 355 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +       G   +VF+++ LI+GYCK  +++ AL L   M   GI PD + YN++
Sbjct: 415 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V    + F EM   G   +   Y   I+  C++  + EA ++   +     
Sbjct: 475 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  ++N LI G C++G L+ A+ LF+ L      A   T+N +I A      M  A  
Sbjct: 535 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 594

Query: 362 LFLDMEAK 369
           +F +M +K
Sbjct: 595 IFDEMLSK 602



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 190/360 (52%), Gaps = 7/360 (1%)

Query: 1   MEAAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A   +K  VF G  P+  TY +LINGLC  G    AL LF E A   G      KP+
Sbjct: 309 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKG-----IKPD 362

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y +++ GLC +G +  A ++  +M +E  +P++ TYN +I+G C   + ++A  +  
Sbjct: 363 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 422

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           + + +G  P+V +FN +++  CK  K+D A +L+E M + G+ P+   YN++++G C  G
Sbjct: 423 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 482

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +VN   E F  M   GC  N  +Y+ILI  +C++ ++E A  +  +M  +G+ PD V +N
Sbjct: 483 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 542

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  G      +E A+ LF +++  G +A    + T I        +  A ++F  +   
Sbjct: 543 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 602

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +  D   Y  LIDG CK+  +  A+     + +   I  + T+  +I++L  + ++ +A
Sbjct: 603 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 662



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 166/334 (49%), Gaps = 20/334 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++ TYN +INGLC+ G      N+ +     N        P+  T+ T+IDG CK 
Sbjct: 393 GCHPDIQTYNIVINGLCKMG------NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 446

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D A +L  +M +  I P+ +TYNS+++G C A   NE    F EM+ +G  PN +++
Sbjct: 447 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 506

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++   C++ KM+EAS+++  M Q G+ P+A  +NTL+ GFC  G +  A  LF  +E 
Sbjct: 507 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 566

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G      +++ LI  +     +  A  ++ EMLSKG + D   Y  L  G  +   V+R
Sbjct: 567 KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 626

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-----------RILKYE 302
           A+    EM + G       +   I+ L  N  + +AV +   +            IL  +
Sbjct: 627 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNAD 686

Query: 303 -LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
             +I A   L++ L K G   I++  +  L  GV
Sbjct: 687 KKEIAAPKILVEDLMKKGH--ISYPTYEVLHEGV 718



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 175/410 (42%), Gaps = 71/410 (17%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y   I    R G    A++ FE M          C P    Y  I+D L    + D+A +
Sbjct: 56  YVASIRAYARAGRLRDAVDAFERMDL------FACPPAAPAYNAIMDALVDAAYHDQAHK 109

Query: 82  LFLKMKDENINPNVVTYNSLIHGFC------------------------------YAN-D 110
           ++++M    ++P++ T+   +  FC                              YA+  
Sbjct: 110 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 169

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            ++A+ LF +M+   V PN+ +FN +++ LCK G + EA  LL  +IQ G+  N F YN 
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229

Query: 171 LMDGFCLTGRVNRAEELFVSMES----------------------------------MGC 196
            + G C  GR+  A  L   M +                                   GC
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 289

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             + F+Y+ +I+GYCK   ++ A  L  + + KG  PD V Y +L  GL     VERA +
Sbjct: 290 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 349

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF+E Q  G+  D   Y + + GLC  G I+ A+++   +       DI+ YN +I+GLC
Sbjct: 350 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 409

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K G +  A  +         + DV T+N +I   C   K+D A  L   M
Sbjct: 410 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 459



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 35/316 (11%)

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
           ++    I+P    Y + I  +  A    +A   F  M      P   ++N IM+ L    
Sbjct: 46  RLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 102

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR------------------------ 180
             D+A ++   M+  GV P+   +   +  FCLT R                        
Sbjct: 103 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVC 162

Query: 181 -------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
                   + A +LF  M       N+ +++ +++  CK  ++  A  L  +++ +G+  
Sbjct: 163 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 222

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           ++  YN    GL E  ++  A +L D M+ + V  D   Y T I GLCK     EA+   
Sbjct: 223 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 281

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           R +       D   YN +IDG CK   ++ A EL +       + D VTY  +I+ LCA+
Sbjct: 282 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 341

Query: 354 GKMDKARDLFLDMEAK 369
           G +++A +LF + +AK
Sbjct: 342 GDVERALELFNEAQAK 357


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  202 bits (514), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 196/369 (53%), Gaps = 7/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  K+   G   N+FTYN  I GLC  G    A+ L     +G   + V   P+ 
Sbjct: 204 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL----VDGMRAYAV---PDV 256

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I GLCK+    +A     +M ++   P+  TYN++I G+C  +   EA  L  +
Sbjct: 257 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 316

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ V++  ++N LC  G ++ A  L       G++P+  VYN+L+ G CL G 
Sbjct: 317 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 376

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++   M   GC  ++ +Y+I+ING CK   I  A  + ++ + KG  PDV  +NT
Sbjct: 377 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 436

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +++ A +L + M  +G+A DT  Y + ++GLCK G + E  E F+ + +  
Sbjct: 437 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 496

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   YN LI+  C+S +++ A ++   + +  L  D V++N +I+  C +G ++ A 
Sbjct: 497 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 556

Query: 361 DLFLDMEAK 369
            LF  +E K
Sbjct: 557 LLFQKLEEK 565



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     ++   GC P+ FTYNT+I+G C+      A  L ++        G V  P+ V
Sbjct: 274 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQV 327

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+GLC EG V++A ELF + + + I P++V YNSL+ G C       A  +  EM
Sbjct: 328 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 387

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P++ ++N+++N LCK G + +A+ ++   I  G  P+ F +NTL+DG+C   ++
Sbjct: 388 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 447

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G   +  +Y+ ++NG CK  ++      + EM+ KG  P+ + YN L
Sbjct: 448 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                  +++E A K+  +M + G+  D  ++ T I G C+NG +  A  LF+ L    Y
Sbjct: 508 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 567

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 +N LI        + +A ++F  +      AD  TY ++I   C    +D+A  
Sbjct: 568 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 627

Query: 362 LFLDMEAK 369
             ++M  K
Sbjct: 628 HLVEMIKK 635



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 182/366 (49%), Gaps = 9/366 (2%)

Query: 3   AAALFMKLRVFGCEPN--VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            A   + LR+    P+     Y T++ GL   GHT  A  LF++M + +        PN 
Sbjct: 134 TARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH------VFPNL 187

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             +  ++  LCK G V +A  L  K+    ++ N+ TYN  I G C A    EA  L   
Sbjct: 188 AAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDG 247

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    V P+VV++N ++  LCK     EA   L  M+  G  P+ F YNT++DG+C    
Sbjct: 248 MRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 306

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A EL       G   +  +Y  LING C   ++E AL L++E  +KGIKPD+V+YN+
Sbjct: 307 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 366

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL     +  A ++ +EM   G   D   Y   I+GLCK G I +A  +     +  
Sbjct: 367 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 426

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y  D+  +N LIDG CK  +L  A +L   +    +  D +TYN +++ LC  GK+++  
Sbjct: 427 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 486

Query: 361 DLFLDM 366
           + F +M
Sbjct: 487 ETFQEM 492



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 182/368 (49%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +R +   P+V TYNTLI GLC+      A++    M N        C P+  
Sbjct: 240 EAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG------CLPDDF 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TIIDG CK   V +A EL      +   P+ VTY SLI+G C   D   A  LF E 
Sbjct: 293 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P++V +N ++  LC  G +  A +++  M + G  P+   YN +++G C  G +
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +       G   +VF+++ LI+GYCK  +++ AL L   M   GI PD + YN++
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V    + F EM   G   +   Y   I+  C++  + EA ++   +     
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  ++N LI G C++G L+ A+ LF+ L      A   T+N +I A      M  A  
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 592

Query: 362 LFLDMEAK 369
           +F +M +K
Sbjct: 593 IFDEMLSK 600



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 190/360 (52%), Gaps = 7/360 (1%)

Query: 1   MEAAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A   +K  VF G  P+  TY +LINGLC  G    AL LF E A   G      KP+
Sbjct: 307 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKG-----IKPD 360

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y +++ GLC +G +  A ++  +M +E  +P++ TYN +I+G C   + ++A  +  
Sbjct: 361 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 420

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           + + +G  P+V +FN +++  CK  K+D A +L+E M + G+ P+   YN++++G C  G
Sbjct: 421 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 480

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +VN   E F  M   GC  N  +Y+ILI  +C++ ++E A  +  +M  +G+ PD V +N
Sbjct: 481 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 540

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  G      +E A+ LF +++  G +A    + T I        +  A ++F  +   
Sbjct: 541 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 600

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +  D   Y  LIDG CK+  +  A+     + +   I  + T+  +I++L  + ++ +A
Sbjct: 601 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 660



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 166/334 (49%), Gaps = 20/334 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++ TYN +INGLC+ G      N+ +     N        P+  T+ T+IDG CK 
Sbjct: 391 GCHPDIQTYNIVINGLCKMG------NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 444

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D A +L  +M +  I P+ +TYNS+++G C A   NE    F EM+ +G  PN +++
Sbjct: 445 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 504

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++   C++ KM+EAS+++  M Q G+ P+A  +NTL+ GFC  G +  A  LF  +E 
Sbjct: 505 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 564

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G      +++ LI  +     +  A  ++ EMLSKG + D   Y  L  G  +   V+R
Sbjct: 565 KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 624

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-----------RILKYE 302
           A+    EM + G       +   I+ L  N  + +AV +   +            IL  +
Sbjct: 625 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNAD 684

Query: 303 -LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
             +I A   L++ L K G   I++  +  L  GV
Sbjct: 685 KKEIAAPKILVEDLMKKGH--ISYPTYEVLHEGV 716



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 175/410 (42%), Gaps = 71/410 (17%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y   I    R G    A++ FE M          C P    Y  I+D L    + D+A +
Sbjct: 54  YVASIRAYARAGRLRDAVDAFERMD------LFACPPAAPAYNAIMDALVDAAYHDQAHK 107

Query: 82  LFLKMKDENINPNVVTYNSLIHGFC------------------------------YAN-D 110
           ++++M    ++P++ T+   +  FC                              YA+  
Sbjct: 108 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 167

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            ++A+ LF +M+   V PN+ +FN +++ LCK G + EA  LL  +IQ G+  N F YN 
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227

Query: 171 LMDGFCLTGRVNRAEELFVSMES----------------------------------MGC 196
            + G C  GR+  A  L   M +                                   GC
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 287

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             + F+Y+ +I+GYCK   ++ A  L  + + KG  PD V Y +L  GL     VERA +
Sbjct: 288 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 347

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF+E Q  G+  D   Y + + GLC  G I+ A+++   +       DI+ YN +I+GLC
Sbjct: 348 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 407

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K G +  A  +         + DV T+N +I   C   K+D A  L   M
Sbjct: 408 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 457



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 35/316 (11%)

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
           ++    I+P    Y + I  +  A    +A   F  M      P   ++N IM+ L    
Sbjct: 44  RLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 100

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR------------------------ 180
             D+A ++   M+  GV P+   +   +  FCLT R                        
Sbjct: 101 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVC 160

Query: 181 -------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
                   + A +LF  M       N+ +++ +++  CK  ++  A  L  +++ +G+  
Sbjct: 161 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 220

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           ++  YN    GL E  ++  A +L D M+ + V  D   Y T I GLCK     EA+   
Sbjct: 221 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 279

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           R +       D   YN +IDG CK   ++ A EL +       + D VTY  +I+ LCA+
Sbjct: 280 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 339

Query: 354 GKMDKARDLFLDMEAK 369
           G +++A +LF + +AK
Sbjct: 340 GDVERALELFNEAQAK 355


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/363 (32%), Positives = 190/363 (52%), Gaps = 6/363 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G +PNV+ Y   I  LCR      A  +FE M     + GV+  PN  TY+ 
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK----KHGVL--PNLYTYSA 274

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK G V +A  L+ ++    + PNVV + +L+ GFC A +   A+ LF+ M+  G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN+  +N +++  CK+G M EA  LL  M  + + P+ F Y  L++G C+  +V  A 
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF  M++     +  +Y+ LI+GYCK   +E AL L SEM + G++P+++ ++TL  G 
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             +  ++ A  L+ EM   G+  D   Y   ID   K   + EA+ L+  +       + 
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             + CL+DG  K GRL +A + ++   +     + V +  +I  LC +G + +A   F D
Sbjct: 515 HTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574

Query: 366 MEA 368
           M +
Sbjct: 575 MRS 577



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 193/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  ++  G  PN++TY+ +I+G C+TG+   A  L++E+            PN V
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE------LLPNVV 305

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T++DG CK   +  A+ LF+ M    ++PN+  YN LIHG C + +  EA  L  EM
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+V ++ +++N LC   ++ EA+RL + M    + P++  YN+L+ G+C    +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +L   M + G + N+ ++S LI+GYC  ++I+ A+ LY EM  KGI PDVV Y  L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               F+   ++ A +L+ +M   G+  +   +   +DG  K G +  A++ ++     + 
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   + CLI+GLC++G +  A   F  +    +  D+ +Y  M+     + ++     
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605

Query: 362 LFLDM 366
           L  DM
Sbjct: 606 LQCDM 610



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 172/356 (48%), Gaps = 6/356 (1%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R   C P+     +++NGL R          ++ M +     G+V  P+   Y  +    
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYFVLFQCC 209

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            K+G   K ++L  +M    I PNV  Y   I   C  N   EA+ +F  M   GV PN+
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            +++ +++  CK G + +A  L + ++   + PN  V+ TL+DGFC    +  A  LFV 
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M   G   N++ Y+ LI+G+CK+  +  A+ L SEM S  + PDV  Y  L  GL    Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V  A +LF +M+   +   +  Y + I G CK   + +A++L   +     E +I  ++ 
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LIDG C    +K A  L+  +    ++ DVVTY  +I A   +  M +A  L+ DM
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 148/298 (49%), Gaps = 6/298 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  ++      P+VFTY  LINGLC       A  LF++M N          P++
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER------IFPSS 409

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY ++I G CKE  +++A +L  +M    + PN++T+++LI G+C   D   A  L+ E
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ P+VV++  +++   K   M EA RL   M++ G+ PN   +  L+DGF   GR
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A + +          N   ++ LI G C+N  I  A   +S+M S GI PD+  Y +
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           +  G  +  ++     L  +M + G+  +    +        NGY+  A  L  + R+
Sbjct: 590 MLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRL 647



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 144/283 (50%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           ++   +P+     S+++G      ++     +  M+ +G+ P+V  + V+     K G  
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +  +LL+ M  +G++PN ++Y   +   C   ++  AE++F  M+  G   N+++YS +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GYCK   +  A  LY E+L   + P+VV++ TL  G  +  ++  A  LF  M + GV
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             + + Y   I G CK+G ++EAV L   +  L    D+  Y  LI+GLC   ++  A  
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF+ +    +     TYN +IH  C +  M++A DL  +M A 
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  202 bits (513), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/402 (30%), Positives = 199/402 (49%), Gaps = 47/402 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  K+   GC P + TYN L+NGLC+ G    A++L  ++ + NG     C P+ V
Sbjct: 277 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD-NG-----CTPDVV 330

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++IDGL KE    +A +LF +M    +  + V Y +LI G        +A  ++  M
Sbjct: 331 TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VV+ + +++ L K G++  A R+ + M   G+ PN  VY+ L+ G C   ++
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKM 450

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+   M+   C  +  +Y+ILI+G CK+ ++E A + + EML  G KPDV  YN L
Sbjct: 451 DCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 510

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG----------------- 284
             GL +    + A  + D+M     ++  + Y + +DGLCK+G                 
Sbjct: 511 ISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV 565

Query: 285 -----------------YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
                             + EAV LF  +R         AYN +I  L KSG++     +
Sbjct: 566 ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNEGQAV 624

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++ + R     D VTYN +++ +    +MD+A   +L+M  +
Sbjct: 625 YQEMTRW-WKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGR 665



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 120/364 (32%), Positives = 185/364 (50%), Gaps = 14/364 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           ++A +L  +    GC  ++ TY  ++N L +      A+ L E++ ANG       C P 
Sbjct: 241 IQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG-------CTPT 293

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY  +++GLCK G +++A +L  K+ D    P+VVTY SLI G        EA  LF 
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G+  + V +  ++  L + GK+ +AS + + M   G  P+    +T++DG    G
Sbjct: 354 EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 413

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+  A  +F SME+ G   N   YS LI+G CK ++++ AL + ++M      PD + YN
Sbjct: 414 RIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYN 473

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GL +   VE A   FDEM   G   D + Y   I GLCK G    A  +   +   
Sbjct: 474 ILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSS 533

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++      Y+ L+DGLCKSG+L+    LF  + R   +A+  T   +I  LC   ++D+A
Sbjct: 534 RF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTRTRLIFHLCKANRVDEA 587

Query: 360 RDLF 363
             LF
Sbjct: 588 VSLF 591



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FG  P++ T+N +++GLC++G  + A++ FE +             +  T++ +I+GL K
Sbjct: 184 FGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-------MPVSAATFSILINGLVK 236

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G + +A  L  +        ++ TY ++++         EA  L  ++   G  P + +
Sbjct: 237 AGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIAT 296

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++N LCK G+++EA  LL  ++  G  P+   Y +L+DG     R   A +LF  M 
Sbjct: 297 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 356

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G   +   Y+ LI G  +  +I  A S+Y  M S G  PDVV  +T+  GL +  ++ 
Sbjct: 357 SRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 416

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F  M+  G+A +   Y   I GLCK   +  A+E+   ++      D   YN LI
Sbjct: 417 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 476

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           DGLCKSG ++ A   F  +       DV TYNI+I  LC  G  D A  +  DM +
Sbjct: 477 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSS 532



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 177/389 (45%), Gaps = 41/389 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FG + +V T N L++   RT     A NL +       E   + +P+  T+  +I G C 
Sbjct: 113 FGFQHSVHTGNALLDVFARTKRHREAGNLLKN------ELATIFRPDVETWNVLITGYCL 166

Query: 73  EGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYAND--------------------- 110
               ++A  +  +M+++  + P++ T+N ++HG C +                       
Sbjct: 167 AREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAAT 226

Query: 111 -------------WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
                          +A  L  E    G   ++ ++  I+N L KN K+ EA  L+E + 
Sbjct: 227 FSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKIT 286

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G  P    YN L++G C  GR+  A +L   +   GC  +V +Y+ LI+G  K K   
Sbjct: 287 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSF 346

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L+ EM S+G+  D V Y  L  GL +  ++ +A  ++  M  HG   D     T I
Sbjct: 347 EAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 406

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           DGL K G I  AV +F+++       +   Y+ LI GLCK+ ++  A E+   + +    
Sbjct: 407 DGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 466

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
            D +TYNI+I  LC  G ++ AR  F +M
Sbjct: 467 PDTITYNILIDGLCKSGDVEAARAFFDEM 495



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 150/298 (50%), Gaps = 47/298 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A++++  +   GC P+V T +T+I+GL + G    A+ +F+ M A G         PN 
Sbjct: 382 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG-------LAPNE 434

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ +I GLCK   +D A E+  +MK     P+ +TYN LI G C + D   A+  F E
Sbjct: 435 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 494

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G +P+V ++N++++ LCK G  D A  +L+ M       + FVY++L+DG C +G+
Sbjct: 495 MLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGLCKSGK 549

Query: 181 VNRAEELFVSMESMG--------------CKHN-------------------VFSYSILI 207
           +     LF  ME  G              CK N                    ++Y+ +I
Sbjct: 550 LEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSII 609

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +   K+ ++    ++Y EM ++  KPD V YN L  G+   ++++RA   + EM   G
Sbjct: 610 SALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRG 666



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 2/278 (0%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           P+V T+N LI G+C A +  EA  +  EM  D GV P++ + N++++ LCK+GK+  A  
Sbjct: 152 PDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMD 211

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
             E  ++  +  +A  ++ L++G    G + +A  L     + GC  ++ +Y+ ++N   
Sbjct: 212 HFE-AVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLA 270

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KNK+I+ A++L  ++ + G  P +  YN L  GL ++ ++E A  L  ++  +G   D  
Sbjct: 271 KNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 330

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y + IDGL K     EA +LF+ +      LD   Y  LI GL ++G++  A  +++++
Sbjct: 331 TYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTM 390

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                + DVVT + MI  L   G++  A  +F  MEA+
Sbjct: 391 TSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEAR 428



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 122/260 (46%), Gaps = 4/260 (1%)

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
           W   +CL       G Q +V + N +++   +  +  EA  LL+  +    RP+   +N 
Sbjct: 102 WELFQCLSSPRF--GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNV 159

Query: 171 LMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           L+ G+CL      A  +   M E  G   ++ +++++++G CK+ ++  A+  + E + +
Sbjct: 160 LITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHF-EAVRR 218

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            +      ++ L  GL +   + +A  L  E   +G   D   Y   ++ L KN  I EA
Sbjct: 219 SMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEA 278

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           V L   +        I  YN L++GLCK GRL+ A +L R +       DVVTY  +I  
Sbjct: 279 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 338

Query: 350 LCADGKMDKARDLFLDMEAK 369
           L  + +  +A  LF +M ++
Sbjct: 339 LGKEKRSFEAYKLFKEMASR 358



 Score = 67.8 bits (164), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 4/188 (2%)

Query: 184 AEELFVSMES--MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           A ELF  + S   G +H+V + + L++ + + K    A +L    L+   +PDV  +N L
Sbjct: 101 AWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVL 160

Query: 242 FIGLFEIHQVERAFKLFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
             G     + E AF +  EM+   GVA     +   + GLCK+G ++ A++ F  +R   
Sbjct: 161 ITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVR-RS 219

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             +    ++ LI+GL K+G +  A  L +         D+ TY  +++ L  + K+ +A 
Sbjct: 220 MPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAV 279

Query: 361 DLFLDMEA 368
            L   + A
Sbjct: 280 ALMEKITA 287



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/197 (25%), Positives = 84/197 (42%), Gaps = 56/197 (28%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----CKP 58
           A A F ++   GC+P+V+TYN LI+GLC+ G+T  A  + ++M++    +  +    CK 
Sbjct: 488 ARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKS 547

Query: 59  -------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI-------- 91
                              N+ T T +I  LCK   VD+A  LF  ++ E +        
Sbjct: 548 GKLEGGCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNS 607

Query: 92  -------------------------NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
                                     P+ VTYN+L++G   AN  + A   ++EM  +G 
Sbjct: 608 IISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGY 667

Query: 127 QPNVVSFNVIMNELCKN 143
            P V   + + ++  K+
Sbjct: 668 VPPVSILHKLADDRLKD 684


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 187/348 (53%), Gaps = 13/348 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VF+YN L+NGLC    +  AL L   MA+  G+    C P+ V+Y+T+I+G  KEG +
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGD----CPPDVVSYSTVINGFFKEGDL 104

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DK       M D+ I+PNVVTYNS+I   C A   ++A  +   M+  GV P+ +++N I
Sbjct: 105 DK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSI 157

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  C +G+  EA   L+ M   GV P+   YN+LMD  C  GR   A ++F SM   G 
Sbjct: 158 VHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGL 217

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K ++ +Y  L+ GY     +     L   M+  GI P+  +++ L     +  +VE A  
Sbjct: 218 KPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAML 277

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F +M++ G+  +   Y T ID LCK+G + +A+  F  +       D   YN LI  LC
Sbjct: 278 VFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLC 337

Query: 317 KSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              + + A ELF   L RG+ ++  + +N +I + C +G++ ++  LF
Sbjct: 338 IFDKWEKAEELFLEMLDRGICLS-TIFFNSIIDSHCKEGRVIESGKLF 384



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/328 (32%), Positives = 173/328 (52%), Gaps = 13/328 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V +Y+T+ING  + G         ++M +          PN VTY +II  LCK  
Sbjct: 84  CPPDVVSYSTVINGFFKEGD-------LDKMLDQR------ISPNVVTYNSIIAALCKAQ 130

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VDKA E+   M    + P+ +TYNS++HGFC +    EA     +M   GV+P+VV++N
Sbjct: 131 TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 190

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +M+ LCKNG+  EA ++ + M + G++P+   Y TL+ G+   G +     L   M   
Sbjct: 191 SLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 250

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   N + +SIL+  Y K +++E A+ ++S+M  +G+ P+ V Y T+   L +  +VE A
Sbjct: 251 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDA 310

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
              F++M   G+  D+  Y + I  LC      +A ELF  +      L    +N +ID 
Sbjct: 311 MLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDS 370

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVT 342
            CK GR+  + +LF  + R  +  D++T
Sbjct: 371 HCKEGRVIESGKLFDLMVRIGVKPDIIT 398



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 165/311 (53%), Gaps = 9/311 (2%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAK 115
           P+  +Y  +++GLC E    +A EL   M D+  +  P+VV+Y+++I+GF    D ++  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
                M+DQ + PNVV++N I+  LCK   +D+A  +L  M++ GV P+   YN+++ GF
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C +G+   A      M S G + +V +Y+ L++  CKN     A  ++  M  +G+KPD+
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             Y TL  G      +     L D M R+G+  + + +   +    K   + EA+ +F  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +R      +   Y  +ID LCKSGR++ A   F  +    L  D + YN +IH+LC   K
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 356 MDKARDLFLDM 366
            +KA +LFL+M
Sbjct: 342 WEKAEELFLEM 352



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 192/394 (48%), Gaps = 41/394 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EP+V TYN+L++ LC+ G    A  +F+ M           KP+  
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG------LKPDIT 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+PN   ++ L+  +       EA  +F +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN V++  +++ LCK+G++++A    E MI  G+RP++ VYN+L+   C+  + 
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 182 NRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +AEELF+ M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KPD++    
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSI-IDSHCKEGRVIESGKLFDLMVRIGVKPDIIT--- 398

Query: 241 LFIGLFEIHQVERAFKL-------FDEMQRHG--------------VAADTWA------Y 273
             +G F +    R + L       F  M   G               A+++        Y
Sbjct: 399 --LGRF-LGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTY 455

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              + GLCKN    +A+ +F+ L ++  +L+ R +N +ID L K GR   A +LF +   
Sbjct: 456 NIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSS 515

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L+ +  TY +M   +   G +++   LFL ME
Sbjct: 516 NGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 549



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 172/380 (45%), Gaps = 64/380 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG------EFGV- 54
           EA  +F  +   G +P++ TY TL+ G    G  +    L + M   NG       F + 
Sbjct: 204 EARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVR-NGIHPNHYVFSIL 262

Query: 55  VC-----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
           VC                        PN VTY T+ID LCK G V+ A   F +M DE +
Sbjct: 263 VCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGL 322

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+ + YNSLIH  C  + W +A+ LF+EM+D+G+  + + FN I++  CK G++ E+ +
Sbjct: 323 RPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGK 382

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS-------MESMGCKHN----- 199
           L +LM++IGV+P+       +      G   R   LFV+       M + G K       
Sbjct: 383 LFDLMVRIGVKPDIITLGRFL------GSARRDYSLFVNIYFIFTNMSNTGDKEKETPVN 436

Query: 200 ---------------VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
                          + +Y+I+++G CKNK  + AL ++  +    +K +   +N +   
Sbjct: 437 TNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDA 496

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++ + + A  LF     +G+  + W YR   + +   G + E  +LF ++      +D
Sbjct: 497 LLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVD 556

Query: 305 IRAYNCLIDGLCKSGRLKIA 324
               N ++  L + G +  A
Sbjct: 557 SGMLNFIVRELLQRGEITRA 576



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 10/212 (4%)

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYS 204
           ++A  + + +++ G+ P+ F YN L++G C   R   A EL   M   G  C  +V SYS
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +ING+ K  +++       +ML + I P+VV YN++   L +   V++A ++   M + 
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           GV  D   Y + + G C +G   EA+   + +R    E D+  YN L+D LCK+GR   A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            ++F S+ +  L  D+ TY  ++      G +
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGAL 237



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 10/259 (3%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNT 170
           +A+ +F E++ +G+ P+V S+N+++N LC   +  EA  LL +M   G    P+   Y+T
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++GF   G +++  +  +S        NV +Y+ +I   CK + ++ A+ + + M+  G
Sbjct: 94  VINGFFKEGDLDKMLDQRIS-------PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           + PD + YN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA 
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           ++F ++     + DI  Y  L+ G    G L     L   + R  +  +   ++I++ A 
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266

Query: 351 CADGKMDKARDLFLDMEAK 369
               K+++A  +F  M  +
Sbjct: 267 AKQEKVEEAMLVFSKMRQQ 285



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 139/333 (41%), Gaps = 27/333 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+R  G  PN  TY T+I+ LC++G    A+  FE+M +         +P+++
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG------LRPDSI 327

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y ++I  LC     +KA+ELFL+M D  I  + + +NS+I   C      E+  LF  M
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 122 MDQGVQPNVVSFN-----------------VIMNELCKNGKMDEASRL----LELMIQIG 160
           +  GV+P++++                    I   +   G  ++ + +            
Sbjct: 388 VRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSS 447

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             P    YN ++ G C     + A  +F ++  M  K    +++I+I+   K    + A 
Sbjct: 448 GGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAK 507

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L+    S G+ P+   Y  +   +     +E   +LF  M+ +G   D+      +  L
Sbjct: 508 DLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVREL 567

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
            + G I  A      +    + L+    +  ID
Sbjct: 568 LQRGEITRAGTYLSMIDEKHFSLEASTASLFID 600


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 124/367 (33%), Positives = 185/367 (50%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   GC+PN  TY+TLINGLC  G    AL++ EEM     E G+  +P   T
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMI----EKGI--EPTVYT 305

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT  I  LC     ++A EL  +MK     PNV TY +LI G         A  L+ +M+
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN V++N ++NELC  G+   A ++   M   G   N   YN ++ G CL G + 
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 425

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  LF  M  MG    V +Y+ LINGY     +  A  L   M   G +PD   YN L 
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  ++E A   F EM   G+  +  +Y   IDG  K+G +  A+ L + +  +   
Sbjct: 486 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN 545

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++ +YN +I+GL K  R   A ++   +    L+ +V+TY  +I  LC +G+   A  +
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605

Query: 363 FLDMEAK 369
           F DME +
Sbjct: 606 FHDMEKR 612



 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/364 (34%), Positives = 190/364 (52%), Gaps = 10/364 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +++  GC PNV TY  LI+GL R G   VA+ L+ +M       G+V  PNTVTY  
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKE----GLV--PNTVTYNA 378

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+ LC  G    A ++F  M+      N  TYN +I G C   D  +A  LF +M+  G
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMG 438

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P VV++N ++N     G ++ A+RLL+LM + G  P+ + YN L+ GF   G++  A 
Sbjct: 439 PLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F  M   G   N  SY+ LI+G+ K+ +++ ALSL   M   G  P+V  YN +  GL
Sbjct: 499 FYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGL 558

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            + ++   A K+ D+M   G+  +   Y T IDGLC+NG    A ++F  +   K   ++
Sbjct: 559 SKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNL 618

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y+ LI GLC+ G+   A E  R    G     + TY+ ++  LC  G+  +A  L  D
Sbjct: 619 YTYSSLIYGLCQEGK---ADEAERMSEIGCE-PTLDTYSTLVSGLCRKGRFYEAEQLVKD 674

Query: 366 MEAK 369
           M+ +
Sbjct: 675 MKER 678



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 190/360 (52%), Gaps = 10/360 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L   ++  GCEP+ +TYN L++G  + G    A   F+EM     E G+   PN V+
Sbjct: 462 AARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV----ECGL--NPNPVS 515

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +IDG  K+G VD A  L  +M++   NPNV +YN++I+G    N ++EA+ +  +M+
Sbjct: 516 YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +QG+ PNV+++  +++ LC+NG+   A ++   M +    PN + Y++L+ G C  G+ +
Sbjct: 576 EQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKAD 635

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AE     M  +GC+  + +YS L++G C+      A  L  +M  +G  PD  IY +L 
Sbjct: 636 EAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLL 691

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
           I   +  +V+ A K+F  ++  G       YR  I  LCK G + EA  LF  +   ++ 
Sbjct: 692 IAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWN 751

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   +  L+DGL K G L +  +L   +       ++ TY I+   L   GK  ++  L
Sbjct: 752 ADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPL 811



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 185/368 (50%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G  P V TYNTLING    G+   A  L + M   NG     C+P+  
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE-NG-----CEPDEW 479

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G  K G ++ A   F +M +  +NPN V+Y +LI G       + A  L   M
Sbjct: 480 TYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRM 539

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PNV S+N ++N L K  +  EA ++ + M++ G+ PN   Y TL+DG C  GR 
Sbjct: 540 EEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRT 599

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  ME   C  N+++YS LI G C+    EG       M   G +P +  Y+TL
Sbjct: 600 QFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQ----EGKADEAERMSEIGCEPTLDTYSTL 655

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +   A +L  +M+  G   D   Y + +   CKN  +  A+++F ++    +
Sbjct: 656 VSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGF 715

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +L +  Y  LI  LCK+G+++ A  LF ++      AD + + +++  L  +G++D    
Sbjct: 716 QLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMK 775

Query: 362 LFLDMEAK 369
           L   ME+K
Sbjct: 776 LLHIMESK 783



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 181/349 (51%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           ++++ NTL+  L +      A NL+++M N         +P+ +T+ T+I+ L K+G V 
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSG------IQPSLLTFNTLINILSKKGKVR 215

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+ +  ++   +++P+V TY SLI G C   + + A  +F  M+ +G  PN V+++ ++
Sbjct: 216 EAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLI 275

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LC  G++DEA  +LE MI+ G+ P  + Y   +   C       A EL   M+  GC+
Sbjct: 276 NGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCR 335

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV +Y+ LI+G  +  ++E A+ LY +ML +G+ P+ V YN L   L    +   A K+
Sbjct: 336 PNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKI 395

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M+ HG  A+T  Y   I GLC  G I +A+ LF  +  +     +  YN LI+G   
Sbjct: 396 FHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLT 455

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G +  A  L   +       D  TYN ++      GK++ A   F +M
Sbjct: 456 KGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 504



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 130/249 (52%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+   G   ++ S N ++ +L K   ++ A  L + M+  G++P+   +NTL++     G
Sbjct: 153 EISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKG 212

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V  AE +   +       +VF+Y+ LI G+C+N+ ++ A  ++  M+ +G  P+ V Y+
Sbjct: 213 KVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYS 272

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL    +V+ A  + +EM   G+    + Y   I  LC   +  EA+EL   ++  
Sbjct: 273 TLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR 332

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +++ Y  LI GL + G+L++A  L+  + +  L+ + VTYN +I+ LC  G+   A
Sbjct: 333 GCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTA 392

Query: 360 RDLFLDMEA 368
             +F  ME 
Sbjct: 393 LKIFHWMEG 401



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 131/261 (50%), Gaps = 10/261 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G  PNV TY TLI+GLCR G T  A  +F +M          C PN  
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK------CLPNLY 619

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I GLC+EG  D+A+    +M +    P + TY++L+ G C    + EA+ L  +M
Sbjct: 620 TYSSLIYGLCQEGKADEAE----RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P+   +  ++   CKN ++D A ++   +   G + +  +Y  L+   C  G+V
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 735

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ LF +M       +   +++L++G  K  E++  + L   M SK   P++  Y  L
Sbjct: 736 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795

Query: 242 FIGLFEIHQVERAFKLFDEMQ 262
              L  I +   +  L D+++
Sbjct: 796 GRELSRIGKSIESEPLADKLK 816


>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Glycine max]
          Length = 693

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 179/346 (51%), Gaps = 7/346 (2%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F +    G  PN+  +  +I GLC+ G    A  + EEM  G G      KPN  T+T +
Sbjct: 260 FRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMV-GRG-----WKPNVYTHTAL 313

Query: 67  IDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           IDGLCK+G+ +KA  LFLK+ + EN  PNV+TY ++I G+C     N A+ L   M +QG
Sbjct: 314 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQG 373

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PN  ++  +++  CK G  + A  L+ +M + G  PN   YN ++DG C  GRV  A 
Sbjct: 374 LAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAY 433

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++  S    G   +  +Y+ILI+ +CK  EI+ AL L+++M+  GI+PD+  Y TL    
Sbjct: 434 KVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVF 493

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +++ +   F+E  R G+      Y + I G C+ G +  A++ F  +       D 
Sbjct: 494 CREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALKFFHRMSDHGCASDS 553

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
             Y  LI GLCK  +L  A  L+ ++    L    VT   + +  C
Sbjct: 554 ITYGALISGLCKQSKLDEARCLYDAMIEKGLTPCEVTRVTLAYEYC 599



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 178/366 (48%), Gaps = 7/366 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G +PN  +Y  ++ G C+ G+ + +    +    G  E G V   +  T
Sbjct: 186 AENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLES----DRWLGGMIERGFVV--DNAT 239

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            + I+   C++GFV +A   F +  +  + PN++ +  +I G C      +A  +  EM+
Sbjct: 240 LSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMV 299

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G +PNV +   +++ LCK G  ++A RL L+L+     +PN   Y  ++ G+C   ++
Sbjct: 300 GRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKM 359

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           NRAE L   M+  G   N  +Y+ LI+G+CK    E A  L + M  +G  P+V  YN +
Sbjct: 360 NRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAI 419

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V+ A+K+     R+G+ AD   Y   I   CK   I +A+ LF  +     
Sbjct: 420 VDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGI 479

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI +Y  LI   C+  R+K +   F    R  L+    TY  MI   C +G +  A  
Sbjct: 480 QPDIHSYTTLIAVFCREKRMKESEMFFEEAVRFGLVPTNKTYTSMICGYCREGNLRLALK 539

Query: 362 LFLDME 367
            F  M 
Sbjct: 540 FFHRMS 545



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 178/364 (48%), Gaps = 9/364 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  + +++   G  P+  T N ++  +   G    A NLF+EM A G        +PN 
Sbjct: 150 EAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARG-------VQPNC 202

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y  ++ G CK G V ++      M +     +  T + ++  FC       A   F  
Sbjct: 203 VSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRR 262

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             + G++PN+++F  ++  LCK G + +A  +LE M+  G +PN + +  L+DG C  G 
Sbjct: 263 FCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGW 322

Query: 181 VNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
             +A  LF+ +  S   K NV +Y+ +I+GYC+++++  A  L S M  +G+ P+   Y 
Sbjct: 323 TEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYT 382

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  G  +    ERA++L + M   G + +   Y   +DGLCK G + EA ++ ++    
Sbjct: 383 TLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRN 442

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D   Y  LI   CK   +K A  LF  + +  +  D+ +Y  +I   C + +M ++
Sbjct: 443 GLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKES 502

Query: 360 RDLF 363
              F
Sbjct: 503 EMFF 506



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 163/310 (52%), Gaps = 1/310 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+T T   ++  + + G V+ A+ LF +M    + PN V+Y  ++ G+C   +  E+   
Sbjct: 165 PSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRW 224

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M+++G   +  + ++I+ E C+ G +  A        ++G+RPN   +  +++G C 
Sbjct: 225 LGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCK 284

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVV 236
            G V +A E+   M   G K NV++++ LI+G CK    E A  L+ +++ S+  KP+V+
Sbjct: 285 RGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVL 344

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y  +  G     ++ RA  L   M+  G+A +T  Y T IDG CK G    A EL   +
Sbjct: 345 TYTAMISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVM 404

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               +  ++  YN ++DGLCK GR++ A+++ +S  R  L AD VTY I+I   C   ++
Sbjct: 405 NEEGFSPNVCTYNAIVDGLCKKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEI 464

Query: 357 DKARDLFLDM 366
            +A  LF  M
Sbjct: 465 KQALVLFNKM 474



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 157/351 (44%), Gaps = 24/351 (6%)

Query: 16  EPNVFTYN---TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           +PN  T++   T++  L     ++VAL+ F   A  + +F    +  T  Y      L  
Sbjct: 70  DPNSLTHDQAVTIVASLASDAGSMVALSFFN-WAIASSKF----RHFTRLYIACAASLIS 124

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
               +KA E+                  ++  F       EA  + IEM +QG+ P+  +
Sbjct: 125 NKNFEKAHEVM---------------QCMVKSFAEIGRVKEAIEMVIEMHNQGLAPSTKT 169

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            N ++  + + G ++ A  L + M   GV+PN   Y  ++ G+C  G V  ++     M 
Sbjct: 170 LNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMI 229

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   +  + S+++  +C+   +  AL  +      G++P+++ +  +  GL +   V+
Sbjct: 230 ERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVK 289

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKYELDIRAYNCL 311
           +AF++ +EM   G   + + +   IDGLCK G+  +A  LF + +R   ++ ++  Y  +
Sbjct: 290 QAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAM 349

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           I G C+  ++  A  L   +    L  +  TY  +I   C  G  ++A +L
Sbjct: 350 ISGYCRDEKMNRAEMLLSRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYEL 400



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 1/227 (0%)

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           G++ EA  ++  M   G+ P+    N ++      G V  AE LF  M + G + N  SY
Sbjct: 146 GRVKEAIEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLFDEMCARGVQPNCVSY 205

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
            +++ GYCK   +  +      M+ +G   D    + +     E   V RA   F     
Sbjct: 206 RVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVTRALWYFRRFCE 265

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+  +   +   I+GLCK G + +A E+   +    ++ ++  +  LIDGLCK G  + 
Sbjct: 266 MGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALIDGLCKKGWTEK 325

Query: 324 AWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A+ LF  L R      +V+TY  MI   C D KM++A  L   M+ +
Sbjct: 326 AFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQ 372



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 9/187 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G +P++ +Y TLI   CR      +   FEE       FG+V  P   
Sbjct: 466 QALVLFNKMVKSGIQPDIHSYTTLIAVFCREKRMKESEMFFEEAV----RFGLV--PTNK 519

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I G C+EG +  A + F +M D     + +TY +LI G C  +  +EA+CL+  M
Sbjct: 520 TYTSMICGYCREGNLRLALKFFHRMSDHGCASDSITYGALISGLCKQSKLDEARCLYDAM 579

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P  V+   +  E C   K+D+    + ++ ++  +      NTL+   C   +V
Sbjct: 580 IEKGLTPCEVTRVTLAYEYC---KIDDGCSAMVVLERLEKKLWVRTVNTLVRKLCSERKV 636

Query: 182 NRAEELF 188
             A   F
Sbjct: 637 GMAALFF 643


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/392 (32%), Positives = 192/392 (48%), Gaps = 44/392 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNV  Y TLI    +      A+ + +EM     E G+   P+T  Y ++I GL K 
Sbjct: 450 GCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR----EQGIA--PDTFCYNSLIIGLSKA 503

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A+   L+M +    P+  TY + I G+  A ++  A     EM++ GV PN V  
Sbjct: 504 KKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLC 563

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++NE CK GK+ EA      M++ G+  +A  Y  LM+G    G+VN AEE+F  M  
Sbjct: 564 TGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRG 623

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +VFSY  LI+G+ K   ++ A S++ EM+  G+  +V+IYN L  G     ++E+
Sbjct: 624 KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEK 683

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L DEM   G   +   Y T IDG CK+G + EA +LF  +++     D   Y  L+D
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD 743

Query: 314 GLCKSGRLKIAWELFRSLPRGV---------------------LIADV------------ 340
           G C+   ++ A  +F +  +G                      L  D+            
Sbjct: 744 GCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKF 803

Query: 341 -----VTYNIMIHALCADGKMDKARDLFLDME 367
                VTYNIMI  LC +G ++ A++LF  M+
Sbjct: 804 GKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQ 835



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 176/368 (47%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ALF  +  FG  P    Y +LI G  R  +      L  E+   N    +V  P   
Sbjct: 368 KAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRN----IVISP--Y 421

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T + G+C  G +D A  +  +M      PNVV Y +LI  F   + + +A  +  EM
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QG+ P+   +N ++  L K  KMDEA   L  M++ G +P+AF Y   + G+   G  
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++    M   G   N    + LIN YCK  ++  A S +  M+ +GI  D   Y  L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V  A ++F EM+  G+A D ++Y T IDG  K G + +A  +F  +     
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  YN L+ G C+SG ++ A EL   +       + VTY  +I   C  G + +A  
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 362 LFLDMEAK 369
           LF +M+ K
Sbjct: 722 LFDEMKLK 729



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 189/407 (46%), Gaps = 46/407 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +  +++   G +P+ FTY   I+G    G    A    +EM     E GV+  PN V
Sbjct: 508 EARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML----ECGVI--PNKV 561

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T +I+  CK+G V +A   F  M ++ I  +  TY  L++G       N+A+ +F EM
Sbjct: 562 LCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+V S+  +++   K G M +AS + + M+Q G+  N  +YN L+ GFC +G +
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   M   G   N  +Y  +I+GYCK+ ++  A  L+ EM  KG+ PD  +Y TL
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTL 741

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT--------W---------------------- 271
             G   ++ VERA  +F E    G A+ +        W                      
Sbjct: 742 VDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSF 800

Query: 272 ---------AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
                     Y   ID LCK G +  A ELF  ++       +  Y  L++G  K GR  
Sbjct: 801 DKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRS 860

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + +F  +    +  D + Y+++I+A   +G   KA  L   M AK
Sbjct: 861 EMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAK 907



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 185/438 (42%), Gaps = 76/438 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G  P+  +YN LI+GLC+      A +L  EM N  G F      + V
Sbjct: 263 EALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEM-NSVGLFA-----DNV 316

Query: 62  TYTTIIDGL-----------------------------------CKEGFVDKAKELFLKM 86
            Y+ +IDGL                                    KEG ++KAK LF  M
Sbjct: 317 AYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGM 376

Query: 87  KDENINPNVVTYNSLIHGF-----------------------------------CYANDW 111
               + P    Y SLI GF                                   C + D 
Sbjct: 377 ITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDL 436

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           + A  +  EM   G +PNVV +  ++    +  +  +A R+L+ M + G+ P+ F YN+L
Sbjct: 437 DGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSL 496

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G     +++ A    + M   G K + F+Y   I+GY +  E   A     EML  G+
Sbjct: 497 IIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGV 556

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+ V+   L     +  +V  A   F  M   G+  D   Y   ++GL KNG + +A E
Sbjct: 557 IPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEE 616

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           +F  +R      D+ +Y  LIDG  K G ++ A  +F  + +  L ++V+ YN+++   C
Sbjct: 617 IFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFC 676

Query: 352 ADGKMDKARDLFLDMEAK 369
             G+++KA++L  +M  K
Sbjct: 677 RSGEIEKAKELLDEMSGK 694



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 178/405 (43%), Gaps = 51/405 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA + F  +   G   +  TY  L+NGL + G    A  +F EM  G G       P+ 
Sbjct: 577 IEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM-RGKG-----IAPDV 630

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y T+IDG  K G + KA  +F +M    +  NV+ YN L+ GFC + +  +AK L  E
Sbjct: 631 FSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDE 690

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G  PN V++  I++  CK+G + EA +L + M   G+ P++FVY TL+DG C    
Sbjct: 691 MSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLND 750

Query: 181 VNRAEELFVSMESMGC---------------------------------------KHNVF 201
           V RA  +F + E  GC                                       K N  
Sbjct: 751 VERAITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDV 809

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+I+  CK   +E A  L+  M    + P V+ Y +L  G  ++ +    F +FDE+
Sbjct: 810 TYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEV 869

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY-----ELDIRAYNCLIDGLC 316
              G+  D   Y   I+   K G   +A+ L   +          +L I     L+ G  
Sbjct: 870 IAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFA 929

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           K G +++A ++  ++ R   I D  T   +I+  C       A D
Sbjct: 930 KVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 180/402 (44%), Gaps = 50/402 (12%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLF----EEMANGNGEF--------GVVCK---PNTVT 62
           +V +Y  LI   CR G+  +A ++     EE+                + CK   P+  +
Sbjct: 223 DVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQS 282

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +IDGLCK+  ++ AK L ++M    +  + V Y+ LI G     + + A  L  EM+
Sbjct: 283 YNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMV 342

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G   + + ++  +  + K G M++A  L + MI  GV P A  Y +L++GF     V 
Sbjct: 343 SHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVR 402

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +  EL V ++      + ++Y   + G C + +++GA ++  EM + G +P+VVIY TL 
Sbjct: 403 KGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLI 462

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +  +   A ++  EM+  G+A DT+ Y + I GL K   + EA      +    ++
Sbjct: 463 KTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFK 522

Query: 303 LDIRAYNCLIDG-----------------------------------LCKSGRLKIAWEL 327
            D   Y   I G                                    CK G++  A   
Sbjct: 523 PDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSA 582

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           FRS+    ++ D  TY ++++ L  +GK++ A ++F +M  K
Sbjct: 583 FRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGK 624



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 149/330 (45%), Gaps = 23/330 (6%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +  +IDG  ++GF+D+A  +F   KD +++  P++   N L+      N  +    ++  
Sbjct: 155 FGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKG 214

Query: 121 MMDQGVQPNVVSFNVIMNELCKNG---------------------KMDEASRLLELMIQI 159
           M+++ V  +V S+ +++   C++G                      +DEA  L + M   
Sbjct: 215 MVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCK 274

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G+ P+   YN L+DG C   R+  A+ L V M S+G   +  +YSILI+G  K +  + A
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAA 334

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             L  EM+S G   D ++Y+     + +   +E+A  LFD M   GV     AY + I+G
Sbjct: 335 NGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEG 394

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
             +   + +  EL   ++     +    Y   + G+C SG L  A+ + + +       +
Sbjct: 395 FFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPN 454

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VV Y  +I       +   A  +  +M  +
Sbjct: 455 VVIYTTLIKTFLQKSRFGDAVRVLKEMREQ 484



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 52/239 (21%), Positives = 111/239 (46%), Gaps = 31/239 (12%)

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           SF+ +  +LC  G +++A  ++  MI+    P A V+++++   CL   V ++++     
Sbjct: 99  SFSFLALDLCNFGSIEKAHSVVIRMIERK-WPVAEVWSSIVR--CLREFVGKSDD----- 150

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIYNTLFIGLFEIH 249
                   V  + ILI+GY +   ++ A+ ++S    L   + P +   N L   L + +
Sbjct: 151 -------RVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRN 203

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +++  + ++  M    V  D  +Y   I   C++G +  A ++     +LK E ++    
Sbjct: 204 RLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDV-----LLKTEEELGTAT 258

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             +D          A EL +S+    L+    +YN++I  LC   +++ A+ L ++M +
Sbjct: 259 LNVDE---------ALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNS 308


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/369 (31%), Positives = 196/369 (53%), Gaps = 7/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  K+   G   N+FTYN  I GLC  G    A+ L     +G   + V   P+ 
Sbjct: 203 LEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRL----VDGMRAYAV---PDV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I GLCK+    +A     +M ++   P+  TYN++I G+C  +   EA  L  +
Sbjct: 256 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 315

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ V++  ++N LC  G ++ A  L       G++P+  VYN+L+ G CL G 
Sbjct: 316 AVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGL 375

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++   M   GC  ++ +Y+I+ING CK   I  A  + ++ + KG  PDV  +NT
Sbjct: 376 ILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNT 435

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  +++ A +L + M  +G+A DT  Y + ++GLCK G + E  E F+ + +  
Sbjct: 436 LIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKG 495

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   YN LI+  C+S +++ A ++   + +  L  D V++N +I+  C +G ++ A 
Sbjct: 496 CHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAY 555

Query: 361 DLFLDMEAK 369
            LF  +E K
Sbjct: 556 LLFQKLEEK 564



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 190/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     ++   GC P+ FTYNT+I+G C+      A  L ++        G V  P+ V
Sbjct: 273 EAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK----GFV--PDQV 326

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+GLC EG V++A ELF + + + I P++V YNSL+ G C       A  +  EM
Sbjct: 327 TYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM 386

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  P++ ++N+++N LCK G + +A+ ++   I  G  P+ F +NTL+DG+C   ++
Sbjct: 387 AEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKL 446

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G   +  +Y+ ++NG CK  ++      + EM+ KG  P+ + YN L
Sbjct: 447 DSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNIL 506

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                  +++E A K+  +M + G+  D  ++ T I G C+NG +  A  LF+ L    Y
Sbjct: 507 IENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGY 566

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 +N LI        + +A ++F  +      AD  TY ++I   C    +D+A  
Sbjct: 567 SATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYM 626

Query: 362 LFLDMEAK 369
             ++M  K
Sbjct: 627 HLVEMIKK 634



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/366 (33%), Positives = 182/366 (49%), Gaps = 9/366 (2%)

Query: 3   AAALFMKLRVFGCEPN--VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            A   + LR+    P+     Y T++ GL   GHT  A  LF++M + +        PN 
Sbjct: 133 TARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTH------VFPNL 186

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             +  ++  LCK G V +A  L  K+    ++ N+ TYN  I G C A    EA  L   
Sbjct: 187 AAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDG 246

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M    V P+VV++N ++  LCK     EA   L  M+  G  P+ F YNT++DG+C    
Sbjct: 247 MRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISM 305

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A EL       G   +  +Y  LING C   ++E AL L++E  +KGIKPD+V+YN+
Sbjct: 306 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 365

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL     +  A ++ +EM   G   D   Y   I+GLCK G I +A  +     +  
Sbjct: 366 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 425

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y  D+  +N LIDG CK  +L  A +L   +    +  D +TYN +++ LC  GK+++  
Sbjct: 426 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 485

Query: 361 DLFLDM 366
           + F +M
Sbjct: 486 ETFQEM 491



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/368 (31%), Positives = 182/368 (49%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +R +   P+V TYNTLI GLC+      A++    M N        C P+  
Sbjct: 239 EAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG------CLPDDF 291

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TIIDG CK   V +A EL      +   P+ VTY SLI+G C   D   A  LF E 
Sbjct: 292 TYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEA 351

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P++V +N ++  LC  G +  A +++  M + G  P+   YN +++G C  G +
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +       G   +VF+++ LI+GYCK  +++ AL L   M   GI PD + YN++
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +V    + F EM   G   +   Y   I+  C++  + EA ++   +     
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  ++N LI G C++G L+ A+ LF+ L      A   T+N +I A      M  A  
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEK 591

Query: 362 LFLDMEAK 369
           +F +M +K
Sbjct: 592 IFDEMLSK 599



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/360 (30%), Positives = 190/360 (52%), Gaps = 7/360 (1%)

Query: 1   MEAAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A   +K  VF G  P+  TY +LINGLC  G    AL LF E A   G      KP+
Sbjct: 306 VQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE-AQAKG-----IKPD 359

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y +++ GLC +G +  A ++  +M +E  +P++ TYN +I+G C   + ++A  +  
Sbjct: 360 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 419

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           + + +G  P+V +FN +++  CK  K+D A +L+E M + G+ P+   YN++++G C  G
Sbjct: 420 DAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAG 479

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +VN   E F  M   GC  N  +Y+ILI  +C++ ++E A  +  +M  +G+ PD V +N
Sbjct: 480 KVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFN 539

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  G      +E A+ LF +++  G +A    + T I        +  A ++F  +   
Sbjct: 540 TLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSK 599

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +  D   Y  LIDG CK+  +  A+     + +   I  + T+  +I++L  + ++ +A
Sbjct: 600 GHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQA 659



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 166/334 (49%), Gaps = 20/334 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++ TYN +INGLC+ G      N+ +     N        P+  T+ T+IDG CK 
Sbjct: 390 GCHPDIQTYNIVINGLCKMG------NISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKR 443

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D A +L  +M +  I P+ +TYNS+++G C A   NE    F EM+ +G  PN +++
Sbjct: 444 LKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITY 503

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++   C++ KM+EAS+++  M Q G+ P+A  +NTL+ GFC  G +  A  LF  +E 
Sbjct: 504 NILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 563

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G      +++ LI  +     +  A  ++ EMLSKG + D   Y  L  G  +   V+R
Sbjct: 564 KGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDR 623

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-----------RILKYE 302
           A+    EM + G       +   I+ L  N  + +AV +   +            IL  +
Sbjct: 624 AYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVVDTILNAD 683

Query: 303 -LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
             +I A   L++ L K G   I++  +  L  GV
Sbjct: 684 KKEIAAPKILVEDLMKKGH--ISYPTYEVLHEGV 715



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/410 (27%), Positives = 175/410 (42%), Gaps = 71/410 (17%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y   I    R G    A++ FE M          C P    Y  I+D L    + D+A +
Sbjct: 53  YVASIRAYARAGRLRDAVDAFERMD------LFACPPAAPAYNAIMDALVDAAYHDQAHK 106

Query: 82  LFLKMKDENINPNVVTYNSLIHGFC------------------------------YAN-D 110
           ++++M    ++P++ T+   +  FC                              YA+  
Sbjct: 107 VYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGH 166

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            ++A+ LF +M+   V PN+ +FN +++ LCK G + EA  LL  +IQ G+  N F YN 
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 171 LMDGFCLTGRVNRAEELFVSMES----------------------------------MGC 196
            + G C  GR+  A  L   M +                                   GC
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGC 286

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             + F+Y+ +I+GYCK   ++ A  L  + + KG  PD V Y +L  GL     VERA +
Sbjct: 287 LPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALE 346

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF+E Q  G+  D   Y + + GLC  G I+ A+++   +       DI+ YN +I+GLC
Sbjct: 347 LFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLC 406

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K G +  A  +         + DV T+N +I   C   K+D A  L   M
Sbjct: 407 KMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 456



 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 135/316 (42%), Gaps = 35/316 (11%)

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
           ++    I+P    Y + I  +  A    +A   F  M      P   ++N IM+ L    
Sbjct: 43  RLSPATIHP---LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAA 99

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR------------------------ 180
             D+A ++   M+  GV P+   +   +  FCLT R                        
Sbjct: 100 YHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVC 159

Query: 181 -------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
                   + A +LF  M       N+ +++ +++  CK  ++  A  L  +++ +G+  
Sbjct: 160 GLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSI 219

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           ++  YN    GL E  ++  A +L D M+ + V  D   Y T I GLCK     EA+   
Sbjct: 220 NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYL 278

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           R +       D   YN +IDG CK   ++ A EL +       + D VTY  +I+ LCA+
Sbjct: 279 RRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAE 338

Query: 354 GKMDKARDLFLDMEAK 369
           G +++A +LF + +AK
Sbjct: 339 GDVERALELFNEAQAK 354


>gi|302758228|ref|XP_002962537.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
 gi|300169398|gb|EFJ36000.1| hypothetical protein SELMODRAFT_70281 [Selaginella moellendorffii]
          Length = 439

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 194/368 (52%), Gaps = 13/368 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+F   R   C P+V T N LING C       AL LF EM      F +V  P   
Sbjct: 56  QAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN---FALV--PEAT 107

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT II   CK   +D+A++L    +    + +V+   S+  GFC A   +EA  L ++M
Sbjct: 108 TYTAIIKCYCKMDRLDQARQLL--EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDM 165

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++   +P++V++NVI++  CK G++ EA  +LE ++ +G  PNA  Y TL+DGFC +G 
Sbjct: 166 VEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225

Query: 181 VNRAEELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           ++ A +LF  +S      + NV +++ LI+G CK   +E A  L  +M ++ ++ D   Y
Sbjct: 226 LSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  GL +  +     ++F+EM R G       Y T +   CK G + +A ++ R++  
Sbjct: 286 TTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVA 345

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+  Y  L++GL ++G+++ A E F  + R       V Y+ ++   C    +D+
Sbjct: 346 KGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDE 405

Query: 359 ARDLFLDM 366
           A   +++M
Sbjct: 406 AVKYYVEM 413



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 191/366 (52%), Gaps = 15/366 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   + ++    C PN+   N L+  LC+ G    A+ +F          G+ C P+ +
Sbjct: 21  EAVECYNQMLERHCVPNLRDINLLLASLCQAGKMDQAMAIFR---------GIQCSPSVI 71

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           T   +I+G C+   +DKA ELF +M K+  + P   TY ++I  +C  +  ++A+ L  E
Sbjct: 72  TLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE 131

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTG 179
                   +V++   +    CK  ++DEA +LL  M++    +P+   +N ++ GFC  G
Sbjct: 132 --SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAG 189

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVI 237
           RV  A E+  ++ SMGC  N  +Y+ LI+G+CK+  +  AL L+  + S+    +P+VV 
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N L  GL +  ++E AF+L  +M+   + ADT+ Y T +DGLCK G   E   +F  + 
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEML 309

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  +  Y  L+   CK+G L+ A ++ RS+    +  DV TY +++  L  +GK+ 
Sbjct: 310 REGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVR 369

Query: 358 KARDLF 363
            A + F
Sbjct: 370 TATEFF 375



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 151/308 (49%), Gaps = 7/308 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C  +V    ++  G C+      A  L  +M           KP+ V +  II G CK G
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSA-----KPDIVAWNVIIHGFCKAG 189

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF--IEMMDQGVQPNVVS 132
            V +A E+   +      PN VTY +LI GFC + + +EA  LF  +   D   +PNVV+
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN +++ LCK  +++ A  L++ M    +R + F Y TLMDG C  GR +    +F  M 
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEML 309

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC  +V +Y+ L++ +CK   ++ A  +   M++KGI PDV  Y  L  GLFE  +V 
Sbjct: 310 REGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVR 369

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A + F+++ R         Y   + G CK   + EAV+ +  +   +   D      L+
Sbjct: 370 TATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429

Query: 313 DGLCKSGR 320
           + LCK GR
Sbjct: 430 EMLCKRGR 437



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 170/357 (47%), Gaps = 15/357 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN FT++ LI GLC+ G    A+  + +M   +      C PN      ++  LC+ G +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERH------CVPNLRDINLLLASLCQAGKM 54

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNV 135
           D+A  +F  ++    +P+V+T N LI+GFC     ++A  LF EM     + P   ++  
Sbjct: 55  DQAMAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESM 194
           I+   CK  ++D+A +LLE         +     ++  GFC   RV+ A +L + M E  
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
             K ++ +++++I+G+CK   +  A  +   ++S G  P+ V Y TL  G  +   +  A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 255 FKLFDEMQR--HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            +LF  +    H    +   +   I GLCK   +  A EL + ++      D   Y  L+
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DGLCK GR      +F  + R      VVTY  ++HA C  G +  A+ +   M AK
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK 346



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 6/177 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +++      + FTY TL++GLC+ G T     +FEEM          C P+ VTYTT
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG------CNPSVVTYTT 322

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++   CK G +  A+++   M  + I P+V TY  L+ G         A   F +++ + 
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             P  V ++ ++   CK   +DEA +    M+   + P+      L++  C  GR +
Sbjct: 383 CPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 6/146 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E + +F ++   GC P+V TY TL++  C+ G    A  +   M       G+   P+  
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK----GI--PPDVT 353

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++GL + G V  A E F K+  E   P  V Y++L+ G C A   +EA   ++EM
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD 147
           +D+ + P+  +  +++  LCK G+ D
Sbjct: 414 LDRRLAPDPATCKLLVEMLCKRGRTD 439


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  202 bits (513), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 189/359 (52%), Gaps = 6/359 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F  +   G  P++ ++++LI    R GH   AL  F +M       G+V  P+ 
Sbjct: 307 LEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTS----GLV--PDN 360

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT +I+G C+ G + +A E+  KM ++    +VV YN++++G C      +A  LF E
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDE 420

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++GV P+  +F  +++  CK G M +A  L  +M Q  ++P+   YN L+DGFC T  
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A EL+  M S     N  SY+IL+NGYC    +  A  L+ EM+ KGIKP +V  NT
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G      + +A +   +M   GV  D+  Y T I+G  K  Y+ +A  L   +    
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKG 600

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            + D+  YN +++G C+ GR++ A  + R +    +  D  TY  +I+   +   + +A
Sbjct: 601 LQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEA 659



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 188/356 (52%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E NV+T N ++N LC+  H I  +  F       G F      + VTY T+I+  C+E
Sbjct: 180 GIELNVYTLNIMVNALCKD-HKIDDVKPFLIDMEQKGIFA-----DIVTYNTLINAYCRE 233

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A E+   M  + + P + TYN++I+G C    +  AK +F EM+  G+ P+  ++
Sbjct: 234 GLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTY 293

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++ E C+N    EA  +   M+  GV P+   +++L+      G +++A   F  M++
Sbjct: 294 NTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKT 353

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +   Y+ILINGYC+N  +  AL +  +ML +G   DVV YNT+  GL +   +  
Sbjct: 354 SGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLAD 413

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LFDEM   GV  D   + T I G CK G + +A+ LF  +     + DI  YN LID
Sbjct: 414 ANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILID 473

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G CK+  ++ A EL+  +    +  + ++Y I+++  C  G + +A  L+ +M  K
Sbjct: 474 GFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRK 529



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/351 (32%), Positives = 186/351 (52%), Gaps = 7/351 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   ++ TYNTLIN  CR G    A  +   M+ G G      KP   TY  +I+GLCK+
Sbjct: 215 GIFADIVTYNTLINAYCREGLLGEAFEVMNSMS-GKG-----LKPTLFTYNAVINGLCKK 268

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +AK +F +M    ++P+  TYN+L+   C  N++ EAK +F +M+ +GV P+++SF
Sbjct: 269 GRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISF 328

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++    +NG +D+A      M   G+ P+  +Y  L++G+C  G ++ A E+   M  
Sbjct: 329 SSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLE 388

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V +Y+ ++NG CK K +  A +L+ EM+ +G+ PD   + TL  G  +   + +
Sbjct: 389 QGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGK 448

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF  M +  +  D   Y   IDG CK   + +A EL+  +   K   +  +Y  L++
Sbjct: 449 ALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVN 508

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           G C  G +  A+ L+  + R  +   +VT N +I   C  G + KA D FL
Sbjct: 509 GYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKA-DEFL 558



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P +FTYN +INGLC+ G  + A  +F EM        +   P+T TY T++   C+ 
Sbjct: 250 GLKPTLFTYNAVINGLCKKGRYVRAKGVFNEM------LSIGLSPDTTTYNTLLVESCRN 303

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               +AK++F  M    ++P++++++SLI         ++A   F +M   G+ P+ V +
Sbjct: 304 NNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIY 363

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            +++N  C+NG M EA  + + M++ G   +   YNT+++G C    +  A  LF  M  
Sbjct: 364 TILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVE 423

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +++ LI+G+CK   +  ALSL+  M  K IKPD+V YN L  G  +  ++E+
Sbjct: 424 RGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEK 483

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L++EM    +  +  +Y   ++G C  G++ EA  L+  +     +  +   N +I 
Sbjct: 484 ANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIK 543

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G C+SG L  A E    +    +  D +TYN +I+       MDKA  L   ME K
Sbjct: 544 GYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETK 599



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 176/339 (51%), Gaps = 7/339 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  ++  G  P+   Y  LING CR G    AL + ++M     E G  C  + V
Sbjct: 343 QALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML----EQG--CALDVV 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y TI++GLCK+  +  A  LF +M +  + P+  T+ +LIHG C   +  +A  LF  M
Sbjct: 397 AYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIM 456

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P++V++N++++  CK  +M++A+ L   MI   + PN   Y  L++G+C  G V
Sbjct: 457 TQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFV 516

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L+  M   G K  + + + +I GYC++ ++  A     +M+S+G+ PD + YNTL
Sbjct: 517 SEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTL 576

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +++AF L ++M+  G+  D   Y   ++G C+ G + EA  + R +     
Sbjct: 577 INGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGI 636

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIAD 339
           + D   Y  LI+G      LK A+      L RG +  D
Sbjct: 637 DPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDD 675



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/350 (27%), Positives = 165/350 (47%), Gaps = 35/350 (10%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
            C  + + +  +I    +   +++  + F  ++ +    ++   NSL+ G       + A
Sbjct: 110 TCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLA 169

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             ++ E+   G++ NV + N+++N LCK+ K+D+    L  M Q G+  +   YNTL++ 
Sbjct: 170 WEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINA 229

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +C  G +  A E+  SM   G K  +F+Y+ +ING CK      A  +++EMLS G+ PD
Sbjct: 230 YCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPD 289

Query: 235 VVIYNTLFI------------GLFE--IHQ---------------------VERAFKLFD 259
              YNTL +             +F   +H+                     +++A   F 
Sbjct: 290 TTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFR 349

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M+  G+  D   Y   I+G C+NG + EA+E+   +      LD+ AYN +++GLCK  
Sbjct: 350 DMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKK 409

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L  A  LF  +    ++ D  T+  +IH  C +G M KA  LF  M  K
Sbjct: 410 LLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQK 459



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 3/188 (1%)

Query: 181 VNRAE--ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           V+R E  E  +SM S  C  +   + +LI  Y + +++      +  +  KG    +   
Sbjct: 95  VSRVEIVESLISMSST-CGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINAC 153

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N+L  GL ++  V+ A+++++E+ R G+  + +     ++ LCK+  I +       +  
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                DI  YN LI+  C+ G L  A+E+  S+    L   + TYN +I+ LC  G+  +
Sbjct: 214 KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR 273

Query: 359 ARDLFLDM 366
           A+ +F +M
Sbjct: 274 AKGVFNEM 281


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/386 (33%), Positives = 194/386 (50%), Gaps = 49/386 (12%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TYN LI G C+ G    A+++F +M +     G++  PN  T  T++ GLC+ G +
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSS----GLL--PNASTMNTLLLGLCEIGQM 76

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A +LF +M+     P   ++N L+ GF  A    E    F EM   GV+P++ S++++
Sbjct: 77  SSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIE---FFKEMKASGVEPDLESYHIL 133

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ L  +G+M EA  L   M      P+   YN LMDG+C  G+   A+ L   +   G 
Sbjct: 134 LSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGY 190

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NVF+YSI+IN YCK  ++E A  ++ +M+     P+ V +NTL  G  +   +E A K
Sbjct: 191 EPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 250

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEAVELFRTLR-------ILKY------- 301
           LF EM++ G  A    Y T ID LCK  G +  AV+LF  L        I+ Y       
Sbjct: 251 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 310

Query: 302 -------------------ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
                              + D+  YNCLI GLC + R++ A  LF  +       +V T
Sbjct: 311 SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTT 367

Query: 343 YNIMIHALCADGKMDKARDLFLDMEA 368
           +N +I  LCA  K+++AR++   M A
Sbjct: 368 FNFLIRGLCAQKKVEEARNILDRMTA 393



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/394 (30%), Positives = 191/394 (48%), Gaps = 43/394 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           +A ++F  ++  G  PN  T NTL+ GLC  G    AL LF EM  G             
Sbjct: 43  QAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILL 102

Query: 49  NGEF---------------GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
            G F               GV  +P+  +Y  ++  L   G + +A  LF  M     +P
Sbjct: 103 RGFFMAGRAIEFFKEMKASGV--EPDLESYHILLSALSDSGRMAEAHALFSAM---TCSP 157

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           +++TYN L+ G+C      EA+ L  E++  G +PNV ++++I+N  CK  K++EA  + 
Sbjct: 158 DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVF 217

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             MI+    PNA  +NTL+ GFC  G +  A +LF  ME +GCK  + +Y+ LI+  CK 
Sbjct: 218 MKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKK 277

Query: 214 K-EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +  +  A+ L++++   G+ P +V YN+L  G  E  +     +L   M   G   D   
Sbjct: 278 RGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE--RANDGLRLLCHMHAEGCKPDVIT 335

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I GLC    + +A  LF  +       ++  +N LI GLC   +++ A    R++ 
Sbjct: 336 YNCLISGLCSANRVEDAQRLFNGMACAP---NVTTFNFLIRGLCAQKKVEEA----RNIL 388

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             +   D+ T+N +I A C  G M  AR++  DM
Sbjct: 389 DRMTAPDMTTFNTIILAFCKAGAMHDAREVMKDM 422



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 149/313 (47%), Gaps = 50/313 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF  +    C P++ TYN L++G C+ G T  A +L +E+     E      PN  
Sbjct: 145 EAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYE------PNVF 195

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ II+  CK   V++A E+F+KM + N  PN VT+N+LI GFC A    +A  LF EM
Sbjct: 196 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 255

Query: 122 MDQGVQPNVVSFNVIMNELCK----------------------------------NGKMD 147
              G +  +V++N +++ LCK                                  + + +
Sbjct: 256 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAN 315

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +  RLL  M   G +P+   YN L+ G C   RV  A+ LF     M C  NV +++ LI
Sbjct: 316 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF---NGMACAPNVTTFNFLI 372

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G C  K++E A ++   M +    PD+  +NT+ +   +   +  A ++  +M +HG  
Sbjct: 373 RGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFY 428

Query: 268 ADTWAYRTFIDGL 280
            +T+       G+
Sbjct: 429 PNTYTTYALAHGI 441



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 131/260 (50%), Gaps = 6/260 (2%)

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           A   ++A  LF E++     PN  ++NV++   CK G+M +A  +   M   G+ PNA  
Sbjct: 3   ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
            NTL+ G C  G+++ A +LF  M++        S++IL+ G+        A+  + EM 
Sbjct: 63  MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMK 119

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           + G++PD+  Y+ L   L +  ++  A  LF  M     + D   Y   +DG CK G   
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTY 176

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           EA  L + +    YE ++  Y+ +I+  CK  +++ AWE+F  +     + + VT+N +I
Sbjct: 177 EAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLI 236

Query: 348 HALCADGKMDKARDLFLDME 367
              C  G ++ A  LF +ME
Sbjct: 237 AGFCKAGMLEDAIKLFAEME 256



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 114/247 (46%), Gaps = 47/247 (19%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +FMK+    C PN  T+NTLI G C+ G    A+ LF EM        + CK   V
Sbjct: 212 EAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK------IGCKATIV 265

Query: 62  TYTTIIDGLCKE-GFVDKAKELFLKMKDENINPNVVTYNSLIHGF--------------- 105
           TY T+ID LCK+ G V  A +LF K++   + P +VTYNSLI GF               
Sbjct: 266 TYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLRLLCHMH 325

Query: 106 ------------------CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                             C AN   +A+ LF  M      PNV +FN ++  LC   K++
Sbjct: 326 AEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVE 382

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA  +L+ M      P+   +NT++  FC  G ++ A E+   M   G   N ++   L 
Sbjct: 383 EARNILDRM----TAPDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALA 438

Query: 208 NGYCKNK 214
           +G   +K
Sbjct: 439 HGIQSSK 445



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 42/81 (51%)

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A+ LF+ +    +  +   YN LI G CK G++  A  +F  +    L+ +  T N ++
Sbjct: 8   QALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLL 67

Query: 348 HALCADGKMDKARDLFLDMEA 368
             LC  G+M  A  LF +M+A
Sbjct: 68  LGLCEIGQMSSALKLFREMQA 88


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/389 (32%), Positives = 193/389 (49%), Gaps = 26/389 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHT--------------IVALNLFEEMAN 47
           EAA L  ++ + GC P+V TY  L+ GLCRT                 +V LN       
Sbjct: 268 EAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCL 327

Query: 48  GNGEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
             G+               C P+  TY  ++ GLCK G    A  +  +M+++   PN+V
Sbjct: 328 AEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIV 387

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           TY++L+H FC    W++A+ +  +M  +G   N   +N I+  L K+GK+DEA RL++ M
Sbjct: 388 TYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM 447

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G +P+   YNT++   C   +++ AE +F ++   G   N  +Y+ LI+    +   
Sbjct: 448 KSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRW 507

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +  L L +EM+  G   DVV YN L   L +   V+R+  L +EM   G+  + ++Y   
Sbjct: 508 QEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNML 567

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I+ LCK G + +A+EL + +       DI  YN LI+GLCK G    A  L   LP   +
Sbjct: 568 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 627

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLD 365
             D+VTYNI+I   C    +D A  + LD
Sbjct: 628 HPDIVTYNILISWHCKVRLLDDA-SMLLD 655



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 116/347 (33%), Positives = 172/347 (49%), Gaps = 6/347 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L+  +   GC P+V TYN L++GLC+ G    A+ + +EM     E G  C PN V
Sbjct: 334 RATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEME----EKG--CAPNIV 387

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T++   C+ G  D A+ +  +M  +  + N   YN +I+        +EA  L  EM
Sbjct: 388 TYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEM 447

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG +P++ ++N I+  LC N +MDEA  +   +++ GV  N   YNTL+     +GR 
Sbjct: 448 KSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRW 507

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                L   M   GC  +V SY+ LI   CK   ++ ++ L  EM++KGIKP+   YN L
Sbjct: 508 QEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNML 567

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A +L  EM   G+  D   Y T I+GLCK G+   A+ L   L     
Sbjct: 568 INELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENV 627

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
             DI  YN LI   CK   L  A  L      G ++ +  T+ +M+ 
Sbjct: 628 HPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQ 674



 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 181/365 (49%), Gaps = 10/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++ + GC  +V T+N ++ GLC  GH   A  L + M          C P+ V
Sbjct: 233 EAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHG------CTPSVV 286

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLC+    D+A  +  ++ + N    VV  N++I G         A  L+  M
Sbjct: 287 TYGFLLRGLCRTRQADEAYAMLGRVPEVN----VVMLNTVIRGCLAEGKLARATELYEMM 342

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V ++N++M+ LCK G+   A R+L+ M + G  PN   Y+TL+  FC  G  
Sbjct: 343 GSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMW 402

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M + G   N   Y+ +I    K+ +++ A+ L  EM S+G KPD+  YNT+
Sbjct: 403 DDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTI 462

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    Q++ A  +F  +   GV A+   Y T I  L  +G   E + L   + +   
Sbjct: 463 IYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGC 522

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD+ +YN LI  LCK G +  +  L   +    +  +  +YN++I+ LC  GK+  A +
Sbjct: 523 PLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALE 582

Query: 362 LFLDM 366
           L  +M
Sbjct: 583 LSKEM 587



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 170/368 (46%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL   +   GC P+   Y T+I+ L   G    A  L +EM        + C  +  
Sbjct: 198 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEM------LLMGCAADVN 251

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ GLC  G V +A  L  +M      P+VVTY  L+ G C     +EA      M
Sbjct: 252 TFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEA----YAM 307

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV  N ++      GK+  A+ L E+M   G  P+   YN LM G C  GR 
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   ME  GC  N+ +YS L++ +C+N   + A ++  +M +KG   +   YN +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +++ A +L  EM+  G   D   Y T I  LC N  + EA  +F  L     
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV 487

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN LI  L  SGR +    L   +       DVV+YN +I ALC +G +D++  
Sbjct: 488 VANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547

Query: 362 LFLDMEAK 369
           L  +M  K
Sbjct: 548 LLEEMMTK 555



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 177/365 (48%), Gaps = 10/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++      P  FT+      LCR G    AL L   MA         C P+ V
Sbjct: 163 DALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHG------CVPDAV 216

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I  L  +G V +A  L  +M       +V T+N ++ G C      EA  L   M
Sbjct: 217 LYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRM 276

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G  P+VV++  ++  LC+  + DEA  +L  + ++    N  + NT++ G    G++
Sbjct: 277 MMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV----NVVMLNTVIRGCLAEGKL 332

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA EL+  M S GC  +V +Y+IL++G CK      A+ +  EM  KG  P++V Y+TL
Sbjct: 333 ARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTL 392

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                     + A  + D+M   G + ++  Y   I  L K+G + EA+ L + ++    
Sbjct: 393 LHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGC 452

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  YN +I  LC + ++  A  +F +L    ++A+ +TYN +IHAL   G+  +   
Sbjct: 453 KPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLR 512

Query: 362 LFLDM 366
           L  +M
Sbjct: 513 LANEM 517



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 155/357 (43%), Gaps = 36/357 (10%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL+L ++M      F V   P+  +Y  ++  L +      A  L+ +M  + + P   T
Sbjct: 128 ALHLLDQMPR---RFAVT--PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFT 182

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +       C      +A  L   M   G  P+ V +  +++ L   G + EA+ LL+ M+
Sbjct: 183 FGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEML 242

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE-- 215
            +G   +   +N ++ G C  G V  A  L   M   GC  +V +Y  L+ G C+ ++  
Sbjct: 243 LMGCAADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQAD 302

Query: 216 --------------------IEGALS---------LYSEMLSKGIKPDVVIYNTLFIGLF 246
                               I G L+         LY  M SKG  PDV  YN L  GL 
Sbjct: 303 EAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           ++ +   A ++ DEM+  G A +   Y T +   C+NG   +A  +   +    + ++ +
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            YN +I  L K G+L  A  L + +       D+ TYN +I+ LC + +MD+A  +F
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIF 479



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 124/279 (44%), Gaps = 4/279 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P+  +YN+++     A+   +A  L+  M+   V P   +F V    LC+ G+  +A 
Sbjct: 141 VTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDAL 200

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            LL  M + G  P+A +Y T++      G V  A  L   M  MGC  +V +++ ++ G 
Sbjct: 201 ALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGL 260

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C    +  A  L   M+  G  P VV Y  L  GL    Q + A+ +   +    V    
Sbjct: 261 CGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVV--- 317

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
               T I G    G +  A EL+  +       D+  YN L+ GLCK GR   A  +   
Sbjct: 318 -MLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDE 376

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +       ++VTY+ ++H+ C +G  D AR +   M AK
Sbjct: 377 MEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAK 415



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 105/214 (49%), Gaps = 8/214 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           EA  +F  L   G   N  TYNTLI+ L  +G     L L  EM  +G       C  + 
Sbjct: 474 EAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHG-------CPLDV 526

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y  +I  LCKEG VD++  L  +M  + I PN  +YN LI+  C A    +A  L  E
Sbjct: 527 VSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKE 586

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++QG+ P++V++N ++N LCK G    A  LLE +    V P+   YN L+   C    
Sbjct: 587 MLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRL 646

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           ++ A  L     S G   N  ++ +++  + +  
Sbjct: 647 LDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQP 680


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 113/370 (30%), Positives = 189/370 (51%), Gaps = 9/370 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-----FGVVCKPN 59
           AL  +++  G   N  T+  +++ LC       A++ F    N   E     F  +  P+
Sbjct: 50  ALLREMKARGITSNGATHGVILSALCARRDLDKAVSYF----NSRTEEACRLFEAIEAPD 105

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +VTYT I+DGL K G  D   E + KM      P ++TY  L+ G C A+    A  +F 
Sbjct: 106 SVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFE 165

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+ +G +P++++++ +++ L K G++DEA +L++LMI  G  P A  Y +++ G C  G
Sbjct: 166 EMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCG 225

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+  A +    M     +  V +YS ++ GY    ++E A ++  EM  +   PD + Y 
Sbjct: 226 RIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYT 285

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                L+ I + E A K+F+ M   G   D   Y   ID  CK G +  A  + R +   
Sbjct: 286 MFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKA 345

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +   Y  ++DG  KS RL+ A EL++ + +  ++   VTYN +I+ALC   KMD+A
Sbjct: 346 AVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEA 405

Query: 360 RDLFLDMEAK 369
            +L  +M+ +
Sbjct: 406 LELLREMQRR 415



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 182/362 (50%), Gaps = 8/362 (2%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           + K+    CEP + TY  L++GLC+      A ++FEEM           KP+ + Y+++
Sbjct: 129 YEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGH------KPDIIAYSSL 182

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           IDGL K G VD+A++L   M      P  V Y S++ G C      EA     EM  + +
Sbjct: 183 IDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRL 242

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           +P V +++ I+      GK++EA  ++E M      P+   Y   ++     GR   AE+
Sbjct: 243 RPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEK 302

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +F +M   GCK ++ +Y I+I+ +CK   +  A  +   M    +KP+  IY  +  G  
Sbjct: 303 VFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFV 362

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD-- 304
           +  ++E A +L+  + + G+   T  Y T I+ LCK   + EA+EL R ++  K EL+  
Sbjct: 363 KSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPS 422

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  Y+ +I GL K G  + A++L   +    +I D  TY  +I  L   GK+ +A +L  
Sbjct: 423 IVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLE 482

Query: 365 DM 366
           +M
Sbjct: 483 EM 484



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/322 (29%), Positives = 161/322 (50%), Gaps = 9/322 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P    Y +++ GLC+ G    A+   +EM        V       TY+ I+ G    
Sbjct: 206 GPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV------DTYSFIVTGYIGM 259

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A  +  +M D +  P+ ++Y   I          EA+ +F  M+++G +P++ ++
Sbjct: 260 GKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTY 319

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            +I++  CK G M  A+ +L LM +  V+PN ++Y  +MDGF  + R+  A EL+  +  
Sbjct: 320 GIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILK 379

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIYNTLFIGLFEIHQV 251
            G   +  +Y+ +IN  CK K+++ AL L  EM  +   ++P +V Y+ +  GL ++   
Sbjct: 380 DGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGME 439

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           ERAF L  EM  +GV  D + Y + I  L   G +  A+EL   +       D   Y  L
Sbjct: 440 ERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTL 499

Query: 312 IDGLCKSGRLKIAWELFRSLPR 333
           +  LC+S  +  AW+L + + R
Sbjct: 500 VQILCRSD-VDAAWDLLQEMMR 520



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 145/289 (50%), Gaps = 15/289 (5%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK--------- 142
            PNV ++N L+ GF   +D+     L  EM  +G+  N  +  VI++ LC          
Sbjct: 26  EPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVS 85

Query: 143 --NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
             N + +EA RL E +      P++  Y  ++DG    G  +   E +  M +  C+  +
Sbjct: 86  YFNSRTEEACRLFEAIEA----PDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTL 141

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y++L++G CK  ++E A  ++ EM+ KG KPD++ Y++L  GL +  +V+ A KL D 
Sbjct: 142 LTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDL 201

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G      AY + + GLCK G I EAV+  + +R  +    +  Y+ ++ G    G+
Sbjct: 202 MIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGK 261

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++ A+ +   +       D ++Y + I AL + G+ ++A  +F  M  K
Sbjct: 262 VEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEK 310



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 9/190 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PN + Y  +++G  ++     AL L++ +       G++  P+TVTY T+I+ LCK   
Sbjct: 348 KPNRYIYTMIMDGFVKSSRLEEALELYQRILKD----GIL--PSTVTYNTVINALCKLKK 401

Query: 76  VDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           +D+A EL  +M  + E + P++VTY+ +IHG         A  L  EM+D GV P+  ++
Sbjct: 402 MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTY 461

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++  L   GK+  A  LLE M++ G+ P+   Y TL+   C +  V+ A +L   M  
Sbjct: 462 TSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMR 520

Query: 194 MGCKHNVFSY 203
            G   N F++
Sbjct: 521 NGHTPNEFTF 530


>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
 gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
          Length = 439

 Score =  201 bits (512), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 194/368 (52%), Gaps = 13/368 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+F   R   C P+V T N LING C       AL LF EM      F +V  P   
Sbjct: 56  QAMAIF---RGIQCSPSVITLNILINGFCELQLLDKALELFHEMEKN---FALV--PEAT 107

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT II   CK   +D+A++L    +    + +V+   S+  GFC A   +EA  L ++M
Sbjct: 108 TYTAIIKCYCKMDRLDQARQLL--EESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDM 165

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++   +P++V++NVI++  CK G++ EA  +LE ++ +G  PNA  Y TL+DGFC +G 
Sbjct: 166 VEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGN 225

Query: 181 VNRAEELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           ++ A +LF  +S      + NV +++ LI+G CK   +E A  L  +M ++ ++ D   Y
Sbjct: 226 LSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTY 285

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  GL +  +     ++F+EM R G       Y T +   CK G + +A ++ R++  
Sbjct: 286 TTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVA 345

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+  Y  L++GL ++G+++ A E F  + R       V Y+ ++   C    +D+
Sbjct: 346 KGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDE 405

Query: 359 ARDLFLDM 366
           A   +++M
Sbjct: 406 AVKYYVEM 413



 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 191/366 (52%), Gaps = 15/366 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   + ++    C PN+   N L+  LC+ G    A+ +F          G+ C P+ +
Sbjct: 21  EAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFR---------GIQCSPSVI 71

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           T   +I+G C+   +DKA ELF +M K+  + P   TY ++I  +C  +  ++A+ L  E
Sbjct: 72  TLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLLEE 131

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTG 179
                   +V++   +    CK  ++DEA +LL  M++    +P+   +N ++ GFC  G
Sbjct: 132 --SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAG 189

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVI 237
           RV  A E+  ++ SMGC  N  +Y+ LI+G+CK+  +  AL L+  + S+    +P+VV 
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N L  GL +  ++E AF+L  +M+   + ADT+ Y T +DGLCK G   E   +F  + 
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEML 309

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  +  Y  L+   CK+G L+ A ++ RS+    +  DV TY +++  L  +GK+ 
Sbjct: 310 REGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVR 369

Query: 358 KARDLF 363
            A + F
Sbjct: 370 TATEFF 375



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 151/308 (49%), Gaps = 7/308 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C  +V    ++  G C+      A  L  +M           KP+ V +  II G CK G
Sbjct: 135 CSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSA-----KPDIVAWNVIIHGFCKAG 189

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF--IEMMDQGVQPNVVS 132
            V +A E+   +      PN VTY +LI GFC + + +EA  LF  +   D   +PNVV+
Sbjct: 190 RVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVT 249

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN +++ LCK  +++ A  L++ M    +R + F Y TLMDG C  GR +    +F  M 
Sbjct: 250 FNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEML 309

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC  +V +Y+ L++ +CK   ++ A  +   M++KGI PDV  Y  L  GLFE  +V 
Sbjct: 310 REGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVR 369

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A + F+++ R         Y   + G CK   + EAV+ +  +   +   D      L+
Sbjct: 370 TATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLV 429

Query: 313 DGLCKSGR 320
           + LCK GR
Sbjct: 430 EMLCKRGR 437



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 170/357 (47%), Gaps = 15/357 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN FT++ LI GLC+ G    A+  + +M   +      C PN      ++  LC+ G +
Sbjct: 1   PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERH------CVPNLRDINLLLASLCQAGTM 54

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNV 135
           D+A  +F  ++    +P+V+T N LI+GFC     ++A  LF EM     + P   ++  
Sbjct: 55  DQAMAIFRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTA 111

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESM 194
           I+   CK  ++D+A +LLE         +     ++  GFC   RV+ A +L + M E  
Sbjct: 112 IIKCYCKMDRLDQARQLLEE--SSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKK 169

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
             K ++ +++++I+G+CK   +  A  +   ++S G  P+ V Y TL  G  +   +  A
Sbjct: 170 SAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEA 229

Query: 255 FKLFDEMQR--HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            +LF  +    H    +   +   I GLCK   +  A EL + ++      D   Y  L+
Sbjct: 230 LQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLM 289

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DGLCK GR      +F  + R      VVTY  ++HA C  G +  A+ +   M AK
Sbjct: 290 DGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK 346



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 6/177 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +++      + FTY TL++GLC+ G T     +FEEM          C P+ VTYTT
Sbjct: 269 LVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREG------CNPSVVTYTT 322

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++   CK G +  A+++   M  + I P+V TY  L+ G         A   F +++ + 
Sbjct: 323 LVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRER 382

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             P  V ++ ++   CK   +DEA +    M+   + P+      L++  C  GR +
Sbjct: 383 CPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGRTD 439



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 77/146 (52%), Gaps = 6/146 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E + +F ++   GC P+V TY TL++  C+ G    A  +   M       G+   P+  
Sbjct: 300 EVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAK----GI--PPDVT 353

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++GL + G V  A E F K+  E   P  V Y++L+ G C A   +EA   ++EM
Sbjct: 354 TYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEM 413

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMD 147
           +D+ + P+  +  +++  LCK G+ D
Sbjct: 414 LDRRLAPDPATCKLLVEMLCKRGRTD 439


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 186/365 (50%), Gaps = 9/365 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  +++  G  P + T+ +LI  LC    T  AL +F +M +      +  KP+   YT 
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMID------MKVKPDAFLYTV 54

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I  LCK   +D A   F +M      P+ VTY  L+H    A  W +   +F EM+ +G
Sbjct: 55  VIGHLCKINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKG 114

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P +V++  ++N  CK G++D+A  L+  +   G  P+  +Y+TL+DG C   R   A 
Sbjct: 115 HSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEAR 174

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ELF    + G   +V  Y+  I+G CK  +++ A +++ +M+  G  PD V YN +   L
Sbjct: 175 ELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 232

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA-VELFRTLRILKYELD 304
            + ++V  A +L D+                +DGLCK+  + EA V L R L        
Sbjct: 233 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPS 292

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+ +IDGLCK+ RL  A+ + + + R   + DVVTY  +I A C  G++D+AR+LF 
Sbjct: 293 VVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQ 352

Query: 365 DMEAK 369
            M  +
Sbjct: 353 RMHER 357



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/266 (33%), Positives = 146/266 (54%), Gaps = 9/266 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  +L+  G  P+   Y+TLI+GLC+      A  LFE MA G+ +       + +
Sbjct: 137 QALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE-MAAGDVQ-------DVI 188

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+ I GLCK G +D+AK + +KM +    P+ V+YN +I+  C  N  +EAK L  + 
Sbjct: 189 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 248

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR-PNAFVYNTLMDGFCLTGR 180
           M++   P V    V+++ LCK+ +++EA  +LE M++ G R P+   Y+ ++DG C   R
Sbjct: 249 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADR 308

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +   M   GC  +V +Y+ +I+ +CK   ++ A  L+  M  +G   DVV YN 
Sbjct: 309 LDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNI 368

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV 266
           L  G     +V+ A  + +EM   G+
Sbjct: 369 LIRGYCRAAKVDEAIAMIEEMAGRGI 394


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/348 (33%), Positives = 178/348 (51%), Gaps = 6/348 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA + F  +   G  PN+ TYN L++   + G   +AL LF EM           +P+ V
Sbjct: 153 EARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRG------FQPSVV 206

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D LC  G V  A++LF KM  +  +P+  TY++L++G   +    EA  +F EM
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+GV  ++V++N ++  L K G MD   +L++ M + G  P+AF +NT+MD      + 
Sbjct: 267 VDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKP 326

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+F  M   GCK ++ SY+ILI+ Y +  +   A  +  EM+  G  P+   YN+L
Sbjct: 327 DAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSL 386

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    QV+ AF + +EM+  G   D   Y   +D L K G    A  LF+ ++    
Sbjct: 387 IHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGV 446

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           E D  +Y   IDGL    RL  A  LF+ +       D   Y I+I A
Sbjct: 447 EPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRA 494



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF +   F C P V  +  LI+ L  +G    A  +++++          C+ +  
Sbjct: 48  DAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKG------CQLDRF 101

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I    + G +D A E+F +MK +   P+  TY  L++    A    EA+  F  M
Sbjct: 102 AYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAM 161

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ PN+ ++N++M+   K G++D A  L   M + G +P+   YN L+D  C  GRV
Sbjct: 162 LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M   GC  + ++YS L+NG  K+  +E A  ++ EM+ +G+  D+V YN+L
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   ++R +KL  EM R G   D +++ T +D L K      A E+F  +     
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC 341

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+ +YN LID   + G    A ++   +     I +  TYN +IH L  DG++D+A  
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFA 401

Query: 362 LFLDME 367
           +  +ME
Sbjct: 402 VLEEME 407



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 179/367 (48%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ KL   GC+ + F YN LI    R+G    A+ +F EM     E      P+  T
Sbjct: 84  AELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSE------PDEYT 137

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +++ L K G V +A+  F  M +  + PN+ TYN L+  F      + A  LF EM 
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G QP+VV++N++++ LC  G++  A +L   M   G  P+++ Y+TL++G   +GRV 
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVE 257

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F  M   G   ++ +Y+ L+    K   ++    L  EM  KG  PD   +NT+ 
Sbjct: 258 EAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIM 317

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L + ++ + A ++F  M   G   D  +Y   ID   + G   +A ++   +    + 
Sbjct: 318 DALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFI 377

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            + + YN LI  L   G++  A+ +   +       DVVTYN ++  L   G+  +A  L
Sbjct: 378 PETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARL 437

Query: 363 FLDMEAK 369
           F  M+ K
Sbjct: 438 FQQMKDK 444



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 151/303 (49%), Gaps = 6/303 (1%)

Query: 70  LCKEGFVDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           L   G +D  + L  +M  E   + PN +    LI  +   N   +A  LF +       
Sbjct: 5   LASWGILDPLETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACS 62

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P V +F  +++ L  +G+ + A  + + ++Q G + + F YN L+  F  +G+++ A E+
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M+  G + + ++Y  L+N   K   ++ A S +  ML +G+ P++  YN L     +
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           + Q++ A  LF EM+R G       Y   +D LC  G +  A +LF  +       D   
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 308 YNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y+ L++GL KSGR++ A ++FR +  RGV + D+V YN ++  L   G MD+   L  +M
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAV-DLVNYNSLLATLAKAGNMDRVWKLMKEM 301

Query: 367 EAK 369
             K
Sbjct: 302 SRK 304



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 29/289 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA---------NGNGEFG 53
           A  LF K+   GC P+ +TY+TL+NGL ++G    A  +F EM          N N    
Sbjct: 224 ARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLA 283

Query: 54  VVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
            + K                    P+  ++ TI+D L K    D A+E+F +M +    P
Sbjct: 284 TLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKP 343

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           ++++YN LI  +    D  +A+ +  EM++ G  P   ++N +++ L  +G++DEA  +L
Sbjct: 344 DLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVL 403

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           E M   G RP+   YN LMD     G   RA  LF  M+  G + +  SY++ I+G   +
Sbjct: 404 EEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFD 463

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
             ++ AL L+ +M + G   D  +Y  L          E   +L  E Q
Sbjct: 464 DRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHESQ 512


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  201 bits (512), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 198/388 (51%), Gaps = 41/388 (10%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F  ++  G  P + T+N +++   +   T     L+ EM      F +  K    T+  +
Sbjct: 189 FDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEM------FRLKIKSTVYTFNIM 242

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I+ LCKEG + KAK+    M++  + PNVVTYN++IHG+C       A+ +   M ++GV
Sbjct: 243 INVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGV 302

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC---------- 176
           +P+  ++  +++ +CK GK++EAS +LE M +IG+ P A  YNTL+DG+C          
Sbjct: 303 EPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFG 362

Query: 177 -------------------------LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
                                    L G+++ A+ +   M   G   +  +Y+ILINGYC
Sbjct: 363 YRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYC 422

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +    + A +L+ EM+SKGI+P +V Y +L   L + ++++ A  LF+++ R G + D  
Sbjct: 423 RCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLI 482

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            +   IDG C NG +  A  L + +       D   YN L+ G C+ G+++ A EL + +
Sbjct: 483 MFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEM 542

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKA 359
            R  +  D ++YN +I      G ++ A
Sbjct: 543 KRRGIRPDHISYNTLISGYSKRGDINDA 570



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 189/357 (52%), Gaps = 6/357 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G +PNV TYNT+I+G C  G    A  + + M N   E      P++ TY ++I G+CK
Sbjct: 265 LGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVE------PDSYTYGSLISGMCK 318

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +++A  +  KMK+  + P  VTYN+LI G+C   D  +A     EM+ + + P V +
Sbjct: 319 GGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVST 378

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N++++ L   GKMDEA  +++ M   G+ P++  YN L++G+C  G   +A  L   M 
Sbjct: 379 YNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMI 438

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G +  + +Y+ LI    K   ++ A  L+ +++ +G  PD++++N L  G      ++
Sbjct: 439 SKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLD 498

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           RAF L  EM +  +  D   Y T + G C+ G + EA EL + ++      D  +YN LI
Sbjct: 499 RAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLI 558

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G  K G +  A+ +   +        ++TYN +I  LC + + D A +L  +M +K
Sbjct: 559 SGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSK 615



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 181/348 (52%), Gaps = 9/348 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+ +TY +LI+G+C+ G    A  + E+M     E G++  P  VTY T+IDG C +
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMK----EIGLL--PTAVTYNTLIDGYCNK 354

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + KA     +M    I P V TYN LIH        +EA  +  +M D G+ P+ +++
Sbjct: 355 GDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITY 414

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N  C+ G   +A  L + MI  G++P    Y +L+       R+  A++LF  +  
Sbjct: 415 NILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIR 474

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++  ++ LI+G+C N  ++ A +L  EM  + I PD V YNTL  G     +VE 
Sbjct: 475 EGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEE 534

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L  EM+R G+  D  +Y T I G  K G I +A  +   +  + +   +  YN LI 
Sbjct: 535 ARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQ 594

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           GLCK+ +  +A EL + +    +  D  TY  +I  +   GK+D + +
Sbjct: 595 GLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI---GKVDDSSE 639



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 156/316 (49%), Gaps = 6/316 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ +  K++  G  P   TYNTLI+G C  G  + A    +EM            P   
Sbjct: 324 EASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRR------AILPTVS 377

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  L  EG +D+A  +   M D  I P+ +TYN LI+G+C   +  +A  L  EM
Sbjct: 378 TYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEM 437

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+QP +V++  ++  L K  +M  A  L E +I+ G  P+  ++N L+DG C  G +
Sbjct: 438 ISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNL 497

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  L   M+      +  +Y+ L+ G C+  ++E A  L  EM  +GI+PD + YNTL
Sbjct: 498 DRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTL 557

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +  AF + DEM   G       Y   I GLCKN     A EL + +     
Sbjct: 558 ISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGI 617

Query: 302 ELDIRAYNCLIDGLCK 317
             D   Y  LI+G+ K
Sbjct: 618 TPDDSTYFSLIEGIGK 633



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 138/253 (54%), Gaps = 6/253 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   G  P+  TYN LING CR G+   A NL +EM +         +P  V
Sbjct: 394 EADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKG------IQPTLV 447

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I  L K   +  A +LF K+  E  +P+++ +N+LI G C   + + A  L  EM
Sbjct: 448 TYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEM 507

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ V++N +M   C+ GK++EA  LL+ M + G+RP+   YNTL+ G+   G +
Sbjct: 508 DKRNIVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDI 567

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  +   M S+G    + +Y+ LI G CKN++ + A  L  EM+SKGI PD   Y +L
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627

Query: 242 FIGLFEIHQVERA 254
             G+ ++     A
Sbjct: 628 IEGIGKVDDSSEA 640



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 157/324 (48%), Gaps = 3/324 (0%)

Query: 40  NLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 99
           ++F E+A      G     +++ +  +I   C+    D A E F  MK++ + P + T+N
Sbjct: 149 DVFHELAITRDRLGT---KSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFN 205

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           +++  F   N       L+ EM    ++  V +FN+++N LCK GK+ +A   +  M  +
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           GV+PN   YNT++ G+C  GRV  A  +   M++ G + + ++Y  LI+G CK  ++E A
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEA 325

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             +  +M   G+ P  V YNTL  G      + +AF   DEM R  +      Y   I  
Sbjct: 326 SGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHA 385

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           L   G + EA  + + +       D   YN LI+G C+ G  K A+ L   +    +   
Sbjct: 386 LFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPT 445

Query: 340 VVTYNIMIHALCADGKMDKARDLF 363
           +VTY  +I+ L    +M  A DLF
Sbjct: 446 LVTYTSLIYVLSKRNRMKAADDLF 469



 Score = 43.9 bits (102), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 41/80 (51%)

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A E F  ++       I  +N ++    K  + +  W L+  + R  + + V T+NIMI
Sbjct: 184 DAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMI 243

Query: 348 HALCADGKMDKARDLFLDME 367
           + LC +GK+ KA+D    ME
Sbjct: 244 NVLCKEGKLKKAKDFIGSME 263


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 182/353 (51%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P ++TY  +INGLC+    + A  +F ++ +          P+ V YTT+I GLC+ G  
Sbjct: 296 PTIYTYQEIINGLCKNEECLEAYRVFNDLKDRG------YAPDRVMYTTMIHGLCEMGSF 349

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A++L+ +M D+ + PN  TYN+++HG   + D+  A  L+ EM ++G     V+ N I
Sbjct: 350 GEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKI 409

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ELC  GK DEA  + + M + G++ +A  YN+L+ GFC  G+V+    L   + +   
Sbjct: 410 ISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDP 469

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +V  Y +LI   CK+ + E A  L  +M SKG+ P+   Y+T+  G  +    E   +
Sbjct: 470 QPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRE 529

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L++E    G    T      I  LC  G   EA E+F+ +     + D   YN LI G C
Sbjct: 530 LYNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFC 589

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G++  +  L   L    L     +Y  +I  LC +G  + A+ L+ DM +K
Sbjct: 590 KEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSK 642



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 167/362 (46%), Gaps = 4/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  ++ +L+  G   ++   N++++G  + G T +    ++EM       G     NT 
Sbjct: 174 EAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKA----GTASDANTE 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I   C  G V +  EL  +     ++P   TYN LI GFC A ++     +   M
Sbjct: 230 TVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTM 289

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   P + ++  I+N LCKN +  EA R+   +   G  P+  +Y T++ G C  G  
Sbjct: 290 IARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSF 349

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L+  M   G + N ++Y+ +++G  K+ + E A  LY+EM +KG     V  N +
Sbjct: 350 GEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKI 409

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    + + AF++F +M   G+ AD   Y + I G CK G + E + L   L     
Sbjct: 410 ISELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDP 469

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  Y  LI   CK G  + A  L   +    L  +  TY+ M+H     G  +  R+
Sbjct: 470 QPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRE 529

Query: 362 LF 363
           L+
Sbjct: 530 LY 531



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 169/366 (46%), Gaps = 6/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F  L+  G  P+   Y T+I+GLC  G    A  L+ EM +         +PN 
Sbjct: 315 LEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKG------MQPNA 368

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY T++ G  K G  ++A EL+ +M ++      VT N +I   C     +EA  +F +
Sbjct: 369 YTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKK 428

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G+Q + +++N ++   CK GK+DE   LL  ++    +P+  +Y  L+   C  G 
Sbjct: 429 MSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGD 488

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A+ L   M S G   N ++Y  +++G  K+ + E    LY+E  +KG        N 
Sbjct: 489 FEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNK 548

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L    + + A ++F +M   G+ AD   Y + I G CK G + +++ L   L    
Sbjct: 549 IISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQG 608

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +    +Y  LI  LC++G  + A  L+  +    +         +I  LC  G+  +  
Sbjct: 609 LQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGM 668

Query: 361 DLFLDM 366
           D  + M
Sbjct: 669 DRLMGM 674



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 169/357 (47%), Gaps = 11/357 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+  + N L   L      + A  +  ++A      G +  P++ +    +  LC  G
Sbjct: 120 CTPDPISSNMLFEALL-DAKAVRAAKMVRDIA------GFI--PDSASLEQYVKCLCGVG 170

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV--QPNVVS 132
           F+++A E++ ++K+  I  ++V  NS++ G   A         + EM+  G     N  +
Sbjct: 171 FIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTET 230

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
              ++   C +G++     LL   ++ G+ P    YN L+ GFC         E+  +M 
Sbjct: 231 VGCLIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMI 290

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           +      +++Y  +ING CKN+E   A  +++++  +G  PD V+Y T+  GL E+    
Sbjct: 291 ARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFG 350

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A KL+ EM   G+  + + Y T + G  K+G    A EL+  +    Y       N +I
Sbjct: 351 EARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKII 410

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             LC  G+   A+E+F+ +    + AD +TYN +I   C +GK+D+  +L  ++ A+
Sbjct: 411 SELCSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQ 467



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 29/269 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EA  +F K+   G + +  TYN+LI G C+ G     +NL  E+   + +  V       
Sbjct: 421 EAFEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLI 480

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              CK                    PN  TY T++ G  K G  +  +EL+ +  ++   
Sbjct: 481 IKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYG 540

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
               T N +I   C     +EA  +F +M + G++ + +++N ++   CK GK+ ++  L
Sbjct: 541 TTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNL 600

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  ++  G++P+A  Y +L+   C  G    A+ L+  M S G + +      LI+G CK
Sbjct: 601 LNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCK 660

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                  +     ML   IKP    +  L
Sbjct: 661 QGRATEGMDRLMGMLENKIKPKKAAFEDL 689



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 81/153 (52%), Gaps = 6/153 (3%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T N +I+ LC  G +  A  +F++M+    E G+  K + +TY ++I G CKEG V K+ 
Sbjct: 545 TCNKIISELCSRGKSDEASEMFKKMS----ETGI--KADAITYNSLIRGFCKEGKVGKSM 598

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            L  ++  + + P+  +Y SLI   C   D   AK L+ +M+ +G++P+      +++ L
Sbjct: 599 NLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGL 658

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           CK G+  E    L  M++  ++P    +  L +
Sbjct: 659 CKQGRATEGMDRLMGMLENKIKPKKAAFEDLAE 691


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 189/368 (51%), Gaps = 5/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +   +  FG EP+++TYN L  GLC+ G    A  L +EM     + G+V  P+ V
Sbjct: 297 QATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEME----QLGIVS-PDVV 351

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D   K      A  L  +M+++ +  ++VT+N ++ G C      EA      M
Sbjct: 352 TYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMM 411

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V+++N +++  CK G + +A  L++ M++ G++ + F  NTL+   C   R 
Sbjct: 412 TEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRY 471

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AEEL  +    G   +  SY  ++  Y K  + E AL L+ EM+ + + P +  YNTL
Sbjct: 472 EEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTL 531

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + ++  A    +E+   G+  D   Y   I   CK G + +A +    +    +
Sbjct: 532 IKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSF 591

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+   N L++GLC  GRL+ A +LF S        DV+TYN +I ALC D  +D A  
Sbjct: 592 KPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALR 651

Query: 362 LFLDMEAK 369
            F DME +
Sbjct: 652 FFADMEVR 659



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 188/431 (43%), Gaps = 80/431 (18%)

Query: 3   AAALFMKLRVFGC-EPNVFTYNTLINGLCRTGHTI--VALNLFEEMANGNGEFGVVCKPN 59
           AA L    R  GC  P++   N +++ L R+  T    +L+ F  +        +   PN
Sbjct: 155 AAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSL------IALRLHPN 208

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T+  ++   C +G +  A     KM+   ++P+ VTYN+L++  C      EA+ L  
Sbjct: 209 HYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLA 268

Query: 120 EMMDQGV-----------------------------------QPNVVSFNVIMNELCKNG 144
            M  +G+                                   +P++ ++NV+   LC+ G
Sbjct: 269 RMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAG 328

Query: 145 KMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           K+DEA +L + M Q+G V P+   YNTL+D      R + A  L   M   G K ++ ++
Sbjct: 329 KVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTH 388

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +I++ G C+  ++E AL     M  +G+ PDV+ YNTL     +   V +AF L DEM R
Sbjct: 389 NIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVR 448

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL--------------------------- 296
            G+  DT+   T +  LCK     EA EL R                             
Sbjct: 449 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEP 508

Query: 297 ------RILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
                  ++K +L   I  YN LI GL   G+L  A +    L    L+ D  TYNI+IH
Sbjct: 509 ALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIH 568

Query: 349 ALCADGKMDKA 359
           A C +G ++KA
Sbjct: 569 AYCKEGDLEKA 579



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 164/330 (49%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  G + ++ T+N ++ GLCR G    AL   E M     E G+   P+ +
Sbjct: 368 DALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMT----EEGLT--PDVI 421

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID  CK G V KA  L  +M    +  +  T N+L++  C    + EA+ L    
Sbjct: 422 TYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP 481

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ VS+  +M    K  K + A  L + MI+  + P+   YNTL+ G    G++
Sbjct: 482 PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKL 541

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +    +  MG   +  +Y+I+I+ YCK  ++E A   +++M+    KPDVV  NTL
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTL 601

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E+A KLF+     G   D   Y T I  LCK+  +  A+  F  + +   
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           + D+  YN L+  L ++GR   A ++   L
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKL 691



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 151/310 (48%), Gaps = 3/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKEL--FLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           +P+      ++  L +         L  F  +    ++PN  T+N L+H  C      +A
Sbjct: 169 RPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADA 228

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
                +M   G+ P+ V++N ++N  C+ G + EA  LL  M + G+ P    YNTL+  
Sbjct: 229 LSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSA 288

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KP 233
           +   G + +A ++  +M + G + ++++Y++L  G C+  +++ A  L  EM   GI  P
Sbjct: 289 YARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSP 348

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV YNTL    F+  +   A  L +EM+  GV +    +   + GLC+ G + EA+   
Sbjct: 349 DVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRL 408

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +       D+  YN LID  CK+G +  A+ L   + R  L  D  T N +++ LC +
Sbjct: 409 EMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKE 468

Query: 354 GKMDKARDLF 363
            + ++A +L 
Sbjct: 469 KRYEEAEELL 478



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 174/375 (46%), Gaps = 46/375 (12%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK------- 57
           G  P+V TYNTLI+  C+ G+   A  L +EM     +            +CK       
Sbjct: 415 GLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474

Query: 58  -------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                        P+ V+Y T++    KE   + A  L+ +M    + P++ TYN+LI G
Sbjct: 475 EELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKG 534

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
                   EA     E+M+ G+ P+  ++N+I++  CK G +++A +    M++   +P+
Sbjct: 535 LSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPD 594

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
               NTLM+G CL GR+ +A +LF S    G K +V +Y+ LI   CK+ +++ AL  ++
Sbjct: 595 VVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFA 654

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +G++PDV  YN L   L E  +   A K+  ++   G     + Y +         
Sbjct: 655 DMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSS----- 709

Query: 285 YIVEAVELFRTLRILKYEL---------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
             VEAVE  +   + K ++         D  +YN  I  LC  G+LK A  +   + +  
Sbjct: 710 --VEAVETGKDPEV-KSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKG 766

Query: 336 LIADVVTYNIMIHAL 350
           +  D  TY  ++  L
Sbjct: 767 MSVDNSTYITLMEGL 781



 Score =  120 bits (301), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 133/271 (49%), Gaps = 15/271 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ TYNTLI GL   G    A++   E+     E G+V  P+  TY  II   CKEG +
Sbjct: 523 PSISTYNTLIKGLSTMGKLTEAIDKLNELM----EMGLV--PDDTTYNIIIHAYCKEGDL 576

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           +KA +   KM + +  P+VVT N+L++G C      +A  LF   +++G + +V+++N +
Sbjct: 577 EKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTL 636

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LCK+  +D A R    M   G++P+ F YN L+      GR   A+++   +   G 
Sbjct: 637 IQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGK 696

Query: 197 KHNVFSYSILINGY-----CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            +  F Y  + +        K+ E++  +    E +      D   YN     L    Q+
Sbjct: 697 LYGRFFYPSIKSSVEAVETGKDPEVKSDI----ESVGNTQGDDQESYNKYIKELCIGGQL 752

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           + A  + DEM + G++ D   Y T ++GL K
Sbjct: 753 KEAKAVLDEMMQKGMSVDNSTYITLMEGLIK 783



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 110/250 (44%), Gaps = 42/250 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     +L   G  P+  TYN +I+  C+ G    A     +M   +       KP+ V
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENS------FKPDVV 596

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T  T+++GLC  G ++KA +LF    ++    +V+TYN+LI   C  ND + A   F +M
Sbjct: 597 TCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADM 656

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM---------------------IQIG 160
             +G+QP+V ++NV+++ L + G+  EA ++L  +                     ++ G
Sbjct: 657 EVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETG 716

Query: 161 VRP---------------NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             P               +   YN  +   C+ G++  A+ +   M   G   +  +Y  
Sbjct: 717 KDPEVKSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYIT 776

Query: 206 LINGYCKNKE 215
           L+ G  K ++
Sbjct: 777 LMEGLIKRQK 786



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/208 (19%), Positives = 90/208 (43%), Gaps = 3/208 (1%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC-KHNVFSYSILINGYCKNKEI--EGA 219
           P + + +  +  +      + A +L  S    GC + ++ + + +++   ++     + +
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L  +  +++  + P+   +N L         +  A     +MQ  G++ D   Y T ++ 
Sbjct: 194 LDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNA 253

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            C+ G + EA  L   ++          YN L+    + G +K A ++  ++       D
Sbjct: 254 HCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPD 313

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDME 367
           + TYN++   LC  GK+D+A  L  +ME
Sbjct: 314 LWTYNVLAAGLCQAGKVDEAFKLKDEME 341


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/398 (31%), Positives = 198/398 (49%), Gaps = 32/398 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA AL   ++  G   +V TY TLI GLC       AL L +EM     +  VV      
Sbjct: 141 EAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLL 200

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                   KP+ + +T +ID LCKEG   KA ++   M    + 
Sbjct: 201 RGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE 260

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTYN LI+  C      EA  L  EM D+GV P+VV++N ++  L    +MDEA   
Sbjct: 261 PNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSF 320

Query: 153 LELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           LE MIQ    V P+   +N+++ G C  GR+ +A ++   M   GC  N+ +Y+ LI G+
Sbjct: 321 LEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGF 380

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  +++ A++L  E+   G++PD   Y+ L  G  ++ +V+RA K    M++ G+ A+ 
Sbjct: 381 LRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAEL 440

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + Y   +  +C+ G +  A+ LF  +      LD  AY+ +I G CKSG +K   +L + 
Sbjct: 441 FHYIPLLAAMCQQGMMERAMGLFNEMD-KNCGLDAIAYSTMIHGACKSGDMKTVKQLIQD 499

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +    L  D VTY+++I+     G +++A  +   M A
Sbjct: 500 MLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTA 537



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 186/356 (52%), Gaps = 7/356 (1%)

Query: 18  NVFTYNTLINGLCRTG--HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +  +YNT++  LCR G  H   A +L  +M+    E     +PN V+YTT++ GLC    
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSR---EAHPAARPNAVSYTTVMRGLCASRR 138

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             +A  L   M+   +  +VVTY +LI G C A++ + A  L  EM   GVQPNVV ++ 
Sbjct: 139 TGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSC 198

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++   C++G+  +  ++ E M + G++P+  ++  L+D  C  G+  +A ++   M   G
Sbjct: 199 LLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRG 258

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV +Y++LIN  CK   +  AL+L  EM  KG+ PDVV YNTL  GL  + +++ A 
Sbjct: 259 LEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAM 318

Query: 256 KLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              +EM +    V  D   + + I GLCK G + +AV++   +       ++  YN LI 
Sbjct: 319 SFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIG 378

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G  +  ++K+A  L   L    L  D  TY+I+I+      ++D+A      M  +
Sbjct: 379 GFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQR 434



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 123/367 (33%), Positives = 191/367 (52%), Gaps = 11/367 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F  +   G +P+V  +  LI+ LC+ G T  A  + + M     E      PN VTY  
Sbjct: 215 VFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLE------PNVVTYNV 268

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+ LCKEG V +A  L  +M D+ + P+VVTYN+LI G     + +EA   F+E M QG
Sbjct: 269 LINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMS-FLEEMIQG 327

Query: 126 ---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V+P+VV+FN +++ LCK G+M +A ++ E+M + G   N   YN L+ GF    +V 
Sbjct: 328 DTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVK 387

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   +   G + + F+YSILING+ K  E++ A      M  +GIK ++  Y  L 
Sbjct: 388 MAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLL 447

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             + +   +ERA  LF+EM ++    D  AY T I G CK+G +    +L + +      
Sbjct: 448 AAMCQQGMMERAMGLFNEMDKN-CGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLA 506

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y+ LI+   K G L+ A  + + +     + DV  ++ +I    A+G+ DK   L
Sbjct: 507 PDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKL 566

Query: 363 FLDMEAK 369
             +M AK
Sbjct: 567 IHEMRAK 573



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 188/391 (48%), Gaps = 46/391 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
              PN  +Y T++ GLC +  T  A+ L   M A+G        + + VTY T+I GLC 
Sbjct: 118 AARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASG-------VRADVVTYGTLIRGLCD 170

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +D A EL  +M    + PNVV Y+ L+ G+C +  W +   +F +M  +G++P+V+ 
Sbjct: 171 ASELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIM 230

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F  ++++LCK GK  +A+++ ++M+Q G+ PN   YN L++  C  G V  A  L   M+
Sbjct: 231 FTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMD 290

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIYNTLFIGL----- 245
             G   +V +Y+ LI G     E++ A+S   EM+     ++PDVV +N++  GL     
Sbjct: 291 DKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGR 350

Query: 246 ------------------------------FEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
                                           +H+V+ A  L DE+   G+  D++ Y  
Sbjct: 351 MTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSI 410

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+G  K   +  A +   T+R    + ++  Y  L+  +C+ G ++ A  LF  + +  
Sbjct: 411 LINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNC 470

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + D + Y+ MIH  C  G M   + L  DM
Sbjct: 471 GL-DAIAYSTMIHGACKSGDMKTVKQLIQDM 500



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 144/310 (46%), Gaps = 38/310 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+V TYNTLI GL        A++  EEM  G+     V +P+ V
Sbjct: 281 EALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGD----TVVEPDVV 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++I GLCK G + +A ++   M +     N+VTYN LI GF   +    A  L  E+
Sbjct: 337 TFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDEL 396

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP------------------ 163
              G++P+  ++++++N   K  ++D A + L  M Q G++                   
Sbjct: 397 AISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMM 456

Query: 164 ----------------NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
                           +A  Y+T++ G C +G +   ++L   M   G   +  +YS+LI
Sbjct: 457 ERAMGLFNEMDKNCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLI 516

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           N Y K  ++E A  +  +M + G  PDV ++++L  G     Q ++  KL  EM+   VA
Sbjct: 517 NMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVA 576

Query: 268 ADTWAYRTFI 277
            D     T I
Sbjct: 577 FDPKIISTII 586


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/358 (35%), Positives = 189/358 (52%), Gaps = 9/358 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P++F YN LI GLCR      A  L  +M    GE G+  KPN  TY   I+   K 
Sbjct: 516 GVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDM----GEKGI--KPNAHTYGAFINLYSKS 569

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A+  F  M    I PN V Y  LI G C   +  EA   F  M+++G+ P++ ++
Sbjct: 570 GEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAY 629

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + I++ L KNGK  EA  +    ++ GV P+ F+YN+L+ GFC  G + +A +L+  M  
Sbjct: 630 SAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLH 689

Query: 194 MGCKHNVFSYSILIN--GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            G   N+  Y+ LIN  GYCK+  +  A  L+ EM+SKGI PD  IY  L  G  +   +
Sbjct: 690 NGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNL 749

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E+A  LF E Q+  V + + A+ + ID  CK+G ++EA ELF  +   K   +I  Y  L
Sbjct: 750 EKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 808

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ID   K+  ++ A +LF  +    +I + +TY  ++ +    G   K   LF DMEA+
Sbjct: 809 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEAR 866



 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/360 (34%), Positives = 186/360 (51%), Gaps = 12/360 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + NV TYN +I G+ + G    A++LF EM     E      P+T TY  +IDG  K 
Sbjct: 376 GLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIE------PDTWTYNLLIDGYLKS 429

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + KA EL  +MK   + P+  TY+ LI G C+++D  +A  +  +M+  GV+PNV  +
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMY 489

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++    +  + + A  LL++MI  GV P+ F YN L+ G C   +V  A+ L V M  
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 549

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K N  +Y   IN Y K+ EI+ A   + +MLS GI P+ VIY  L  G  ++     
Sbjct: 550 KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE 609

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCL 311
           A   F  M   G+  D  AY   I  L KNG   EA+ +F  L+ LK  +  D+  YN L
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVF--LKFLKTGVVPDVFLYNSL 667

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI--HALCADGKMDKARDLFLDMEAK 369
           I G CK G ++ A +L+  +    +  ++V YN +I  +  C  G + +A  LF +M +K
Sbjct: 668 ISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISK 727



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/369 (34%), Positives = 192/369 (52%), Gaps = 14/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G  PN FTY  LI+G  + G+   AL + +EM           K N V
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRG------LKLNVV 382

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G+ K G + KA  LF +M    I P+  TYN LI G+  ++D  +A  L  EM
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+  +++V+++ LC +  + +A+ +L+ MI+ GV+PN F+Y TL+  +    R 
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M + G   ++F Y+ LI G C+ K++E A  L  +M  KGIKP+   Y   
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGA- 561

Query: 242 FIGLF----EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           FI L+    EI   ER FK   +M   G+  +   Y   I G C  G  VEA+  F+ + 
Sbjct: 562 FINLYSKSGEIQVAERYFK---DMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML 618

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 DIRAY+ +I  L K+G+ K A  +F    +  ++ DV  YN +I   C +G ++
Sbjct: 619 EKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIE 678

Query: 358 KARDLFLDM 366
           KA  L+ +M
Sbjct: 679 KASQLYDEM 687



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 111/350 (31%), Positives = 183/350 (52%), Gaps = 8/350 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           C+PN+FTYN  I GLC+TG    AL + +  M  G G       P+  TYT ++DG CK+
Sbjct: 272 CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLG-------PDGHTYTLLVDGFCKQ 324

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               +AK +F  M    +NPN  TY +LI GF    +  EA  +  EM+ +G++ NVV++
Sbjct: 325 KRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTY 384

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  + K G+M +A  L   M+  G+ P+ + YN L+DG+  +  + +A EL   M++
Sbjct: 385 NAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKA 444

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                + F+YS+LI+G C + +++ A  +  +M+  G+KP+V +Y TL     +  + E 
Sbjct: 445 RKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEM 504

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L   M  +GV  D + Y   I GLC+   + EA  L   +     + +   Y   I+
Sbjct: 505 AIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFIN 564

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              KSG +++A   F+ +    ++ + V Y I+I   C  G   +A   F
Sbjct: 565 LYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTF 614



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 175/350 (50%), Gaps = 7/350 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V+TY  +I   C+ G  I    +  EM          CKPN  TY   I GLC+ G V
Sbjct: 240 PDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-------CKPNLFTYNAFIGGLCQTGAV 292

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A E+   M ++ + P+  TY  L+ GFC      EAK +F  M   G+ PN  ++  +
Sbjct: 293 DEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTAL 352

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++   K G ++EA R+ + MI  G++ N   YN ++ G    G + +A  LF  M   G 
Sbjct: 353 IDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGI 412

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + + ++Y++LI+GY K+ ++  A  L +EM ++ + P    Y+ L  GL     +++A +
Sbjct: 413 EPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANE 472

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + D+M R+GV  + + Y T I    +      A+EL + +       D+  YNCLI GLC
Sbjct: 473 VLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLC 532

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ++ +++ A  L   +    +  +  TY   I+     G++  A   F DM
Sbjct: 533 RAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDM 582



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 187/401 (46%), Gaps = 42/401 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F  +   G  PN   Y  LI G C  G+T+ AL+ F+ M     E G++  P+   
Sbjct: 575 AERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCML----EKGLI--PDIRA 628

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ II  L K G   +A  +FLK     + P+V  YNSLI GFC   D  +A  L+ EM+
Sbjct: 629 YSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML 688

Query: 123 DQGVQPNVVSFNVIMNEL--CKNGKMDEASRLLELMIQIGVRPNAFVY------------ 168
             G+ PN+V +N ++N+   CK+G + EA +L + MI  G+ P+ ++Y            
Sbjct: 689 HNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGN 748

Query: 169 ----------------------NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                 N+L+D FC  G+V  A ELF  M       N+ +Y+IL
Sbjct: 749 LEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTIL 808

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+ Y K + +E A  L+ +M ++ I P+ + Y +L +   +I    +   LF +M+  G+
Sbjct: 809 IDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGI 868

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A D  AY       CK G  +EA++L     +   +L+   ++ LI  LCK  ++    E
Sbjct: 869 ACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLE 928

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L   + +  L     T N ++      G  D+A  +   M+
Sbjct: 929 LLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQ 969



 Score =  170 bits (431), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 161/306 (52%), Gaps = 1/306 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  +    ++  L K   +    +++  M +  I P+V TY ++I   C   D  + K +
Sbjct: 205 PTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMV 264

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM ++  +PN+ ++N  +  LC+ G +DEA  + +LM++ G+ P+   Y  L+DGFC 
Sbjct: 265 LSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCK 323

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R   A+ +F SM S G   N F+Y+ LI+G+ K   IE AL +  EM+++G+K +VV 
Sbjct: 324 QKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN +  G+ +  ++ +A  LF+EM   G+  DTW Y   IDG  K+  + +A EL   ++
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K       Y+ LI GLC S  L+ A E+   + R  +  +V  Y  +I A   + + +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503

Query: 358 KARDLF 363
            A +L 
Sbjct: 504 MAIELL 509



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 156/302 (51%), Gaps = 9/302 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLIN--GLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +A+ L+ ++   G  PN+  YNTLIN  G C++G+   A  LF+EM +          P+
Sbjct: 679 KASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKG------ISPD 732

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
              Y  +IDG  KEG ++KA  LF + + +++  ++  +NSLI  FC      EA+ LF 
Sbjct: 733 GYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG-SLSAFNSLIDSFCKHGKVIEARELFD 791

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+D+ + PN+V++ ++++   K   M+EA +L   M    + PN   Y +L+  +   G
Sbjct: 792 DMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIG 851

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
              +   LF  ME+ G   +  +Y ++ + YCK  +   AL L ++ L +GIK +  +++
Sbjct: 852 NRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFD 911

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L   L +  Q+    +L  EM +  ++  +    T + G  K+G   EA ++   ++ L
Sbjct: 912 ALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRL 971

Query: 300 KY 301
            +
Sbjct: 972 GW 973



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 146/325 (44%), Gaps = 18/325 (5%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINP-----------------NVVTYNSLIHG 104
           +Y+ +   LC  G + +A  +  K+      P                 N+  ++  I  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           F      NEA  +FI  + +G  P ++  N +M +L K   M    ++   M++  + P+
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            + Y  ++   C  G V + + +   ME   CK N+F+Y+  I G C+   ++ AL +  
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            M+ KG+ PD   Y  L  G  +  + + A  +F+ M   G+  + + Y   IDG  K G
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEG 360

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            I EA+ +   +     +L++  YN +I G+ K+G +  A  LF  +    +  D  TYN
Sbjct: 361 NIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYN 420

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
           ++I        M KA +L  +M+A+
Sbjct: 421 LLIDGYLKSHDMAKACELLAEMKAR 445



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/179 (26%), Positives = 81/179 (45%), Gaps = 10/179 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF+ +      PN  TY +L+    + G+    ++LF++M       G+ C  + +
Sbjct: 820 EAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDME----ARGIAC--DAI 873

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +    CKEG   +A +L  K   E I      +++LI   C     +    L  EM
Sbjct: 874 AYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEM 933

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             + +  +  + N ++    K+G  DEAS++L +M ++G  P +    +L D    TGR
Sbjct: 934 GKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSL---SLTDSIS-TGR 988


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 196/351 (55%), Gaps = 7/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV TYN +INGLC+ G    +L ++E M     E       +  TY+++I GLC+ G +
Sbjct: 255 PNVVTYNIMINGLCKCGRFDESLEIWERMTKNERE------KDMFTYSSLIHGLCEAGNI 308

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A  ++ ++ + ++  + VT+N++++GFC A    E+  L++ M  +  Q  VVS+N++
Sbjct: 309 DGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-TVVSYNIL 367

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L +NGK++EA  + EL+ + G RP +  Y  L+ G C  GR+N+A ++F   E    
Sbjct: 368 IKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPG 427

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K + ++YS +++G CK   ++ A+S+ ++M  +G K D  + N L  G     ++E A  
Sbjct: 428 KLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAIN 487

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
            F EM+  G +    +Y T I GLCK     EA    + +   +++ D+   + L+DGLC
Sbjct: 488 FFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLC 547

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  ++++A  L++         D+  YNI++H LC+  K++ A  L+  M+
Sbjct: 548 QEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMK 598



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 199/355 (56%), Gaps = 8/355 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+VF+Y TLING+ + G  + AL +F+EM+      GVV   +   Y  +IDG  K G 
Sbjct: 183 KPDVFSYGTLINGMVKVGDLLGALKVFDEMSVR----GVV--ADVTCYNMLIDGFFKHGD 236

Query: 76  VDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            DK KE++ ++ KD ++ PNVVTYN +I+G C    ++E+  ++  M     + ++ +++
Sbjct: 237 YDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYS 296

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ LC+ G +D A R+ + +++  +  +A  +N +++GFC  G++  + EL++ M   
Sbjct: 297 SLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKE 356

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
            C+  V SY+ILI G  +N ++E A+S++  +  KG +P+   Y  L  GL +  ++ +A
Sbjct: 357 NCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKA 415

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            K+F E +      D +AY + +DGLCK G + EA+ +   +    Y+LD    N LI+G
Sbjct: 416 LKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLING 475

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             ++ +L+ A   FR +        +V+YN +I  LC   +  +A     +M  K
Sbjct: 476 FVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK 530



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 187/360 (51%), Gaps = 10/360 (2%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPNTVTYTTIIDGL 70
           +FGC+P V +YNTL+N         V LN ++   + +  F  +   PN  TY  +I   
Sbjct: 109 IFGCKPGVRSYNTLLNAF-------VELNEWDRAESFSRYFESMDVSPNLQTYNILIKIS 161

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           CK+  ++KA  L   M  +N+ P+V +Y +LI+G     D   A  +F EM  +GV  +V
Sbjct: 162 CKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADV 221

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
             +N++++   K+G  D+   + E +++   V PN   YN +++G C  GR + + E++ 
Sbjct: 222 TCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWE 281

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M     + ++F+YS LI+G C+   I+GA+ +Y E++   +  D V +N +  G     
Sbjct: 282 RMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAG 341

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +++ +F+L+  M +        +Y   I GL +NG + EA+ ++  L       +   Y 
Sbjct: 342 KIKESFELWMVMGKENCQTVV-SYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYG 400

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LI GLCK+GRL  A ++F+    G    D   Y+ M+  LC +G+MD+A  +   M+ +
Sbjct: 401 VLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKR 460



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 158/294 (53%), Gaps = 10/294 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +++  L   GC P   TY  LI+GLC+ G    AL +F+E  +G G      K +  
Sbjct: 379 EAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPG------KLDAY 432

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            Y++++DGLCKEG +D+A  +  +M      ++P+V   N LI+GF  A+   +A   F 
Sbjct: 433 AYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVC--NPLINGFVRASKLEDAINFFR 490

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G  P +VS+N ++  LCK  +  EA   ++ M++   +P+    + LMDG C   
Sbjct: 491 EMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEK 550

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  A  L+      G K ++  Y+IL++G C   ++E AL LYS M      P++V  N
Sbjct: 551 KIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRN 610

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           TL  GL+++   E+A +++D + + G+  D  +Y   I GLC    I +A+E  
Sbjct: 611 TLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFL 664



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 175/349 (50%), Gaps = 9/349 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  L+M +    C+  V +YN LI GL   G    A++++E +          C+P + 
Sbjct: 345 ESFELWMVMGKENCQ-TVVSYNILIKGLFENGKVEEAISIWELLCKKG------CRPEST 397

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCK G ++KA ++F + +D     +   Y+S++ G C     +EA  +  +M
Sbjct: 398 TYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQM 457

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G + +    N ++N   +  K+++A      M   G  P    YNTL+ G C   R 
Sbjct: 458 DKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERF 517

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A      M     K ++ + S+L++G C+ K+IE AL+L+ + L KG KPD+ +YN L
Sbjct: 518 SEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNIL 577

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + ++E A +L+  M+R     +     T ++GL K     +A E++  +     
Sbjct: 578 MHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGL 637

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHA 349
             DI +YN  I GLC   R+  A E    +L RG+L    VT+NI++ A
Sbjct: 638 HPDIISYNITIKGLCSCSRISDAIEFLNDALNRGIL-PTAVTWNILVRA 685



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 170/348 (48%), Gaps = 7/348 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  T+N ++NG CR G    +  L+  M   N +         V+Y  +I GL + G V+
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQ-------TVVSYNILIKGLFENGKVE 378

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  ++  +  +   P   TY  LIHG C     N+A  +F E  D   + +  +++ ++
Sbjct: 379 EAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMV 438

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + LCK G+MDEA  ++  M + G + +  V N L++GF    ++  A   F  ME  GC 
Sbjct: 439 DGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCS 498

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             + SY+ LI G CK +    A S   EML K  KPD++  + L  GL +  ++E A  L
Sbjct: 499 PTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNL 558

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           + +    G   D   Y   + GLC    + +A++L+  ++      ++   N L++GL K
Sbjct: 559 WQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYK 618

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
               + A E++  + +  L  D+++YNI I  LC+  ++  A +   D
Sbjct: 619 VRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLND 666



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 175/345 (50%), Gaps = 7/345 (2%)

Query: 24  TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELF 83
           T+I    +   +  AL+ F+ M +  G     CKP   +Y T+++   +    D+A+   
Sbjct: 85  TVIKAYAKNKMSNKALDTFQNMQDIFG-----CKPGVRSYNTLLNAFVELNEWDRAESFS 139

Query: 84  LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN 143
              +  +++PN+ TYN LI   C      +A  L   M  Q ++P+V S+  ++N + K 
Sbjct: 140 RYFESMDVSPNLQTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKV 199

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFS 202
           G +  A ++ + M   GV  +   YN L+DGF   G  ++ +E++  + +      NV +
Sbjct: 200 GDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVT 259

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+I+ING CK    + +L ++  M     + D+  Y++L  GL E   ++ A +++ E+ 
Sbjct: 260 YNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIV 319

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
              +  D   +   ++G C+ G I E+ EL+  +     +  + +YN LI GL ++G+++
Sbjct: 320 ESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVE 378

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A  ++  L +     +  TY ++IH LC +G+++KA  +F + E
Sbjct: 379 EAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAE 423


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  201 bits (511), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/409 (30%), Positives = 193/409 (47%), Gaps = 76/409 (18%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F C P+V T+N LIN  C  G T VA++    M     E      P+  T+TTI+  LC+
Sbjct: 276 FMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVE------PSVATFTTILHALCR 329

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V +A++LF  ++D  I PN   YN+L+ G+  A +  +A  L+ EM   GV P+ V+
Sbjct: 330 EGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVT 389

Query: 133 FN-----------------------------------VIMNELCKNGKMDEASRLLE--- 154
           FN                                   V+++ LC  G++DEA +LL+   
Sbjct: 390 FNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELL 449

Query: 155 --------------------------------LMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                                           +M++ G  P++   N+L+ G C  G + 
Sbjct: 450 EKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQ 509

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M   G   N  +Y++L++GY K   +EGA  L+ EM  +GI PD V +  L 
Sbjct: 510 EARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALI 569

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   VE A+++F EM   G   + +AY + I GLC  G + EA++L + +R     
Sbjct: 570 DGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLL 629

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            D   +N +IDG C+ G++K A E F  + R  L+ D+ T+NI+I   C
Sbjct: 630 SDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYC 678



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 176/338 (52%), Gaps = 7/338 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  T N+L+ GLCR G    A  L   M      F +    N V YT ++DG  K 
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKG--FPI----NKVAYTVLLDGYFKM 540

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             ++ A+ L+ +MK+  I P+ V + +LI G   A +  EA  +F+EM   G  PN  ++
Sbjct: 541 NNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAY 600

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LC  G++ EA +L + M Q G+  + F +N ++DGFC  G++  A E F+ M+ 
Sbjct: 601 NSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQR 660

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   ++F+++ILI GYCK  ++ GA  + ++M S G+ PD+  YNT   G   + ++ +
Sbjct: 661 IGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQ 720

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + D++   G+  DT  Y T + G+C +  +  A+ L   L  + +  ++   N L+ 
Sbjct: 721 AVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMILTAKLLKMGFIPNVITTNMLLS 779

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
             CK G  + A    + L       D ++Y I+  A C
Sbjct: 780 HFCKQGMPEKALIWGQKLREISFGFDEISYRILDQAYC 817



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 197/451 (43%), Gaps = 112/451 (24%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+V T+ T+++ LCR G+ + A  LF+    G  + G+   PN   Y T++DG  K 
Sbjct: 312 GVEPSVATFTTILHALCREGNVVEARKLFD----GIQDMGIA--PNAAIYNTLMDGYFKA 365

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHG----------------------------- 104
             V +A  L+ +M+   ++P+ VT+N L+ G                             
Sbjct: 366 REVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLY 425

Query: 105 ------FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                  C+A   +EA  L  E++++G+  +VV+FN ++    + G  D+A     +M++
Sbjct: 426 DVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR 485

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  P++   N+L+ G C  G +  A  L   M   G   N  +Y++L++GY K   +EG
Sbjct: 486 CGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEG 545

Query: 219 ALSLYSEMLSKGIKPDVVI-----------------------------------YNTLFI 243
           A  L+ EM  +GI PD V                                    YN+L  
Sbjct: 546 AQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIR 605

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GL +  +V  A KL  EM++ G+ +DT+ +   IDG C+ G +  A+E F  ++ +    
Sbjct: 606 GLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLP 665

Query: 304 DIRAYNCLIDGLCKSGRLKIAWEL-------------------------FRSLPRGVLI- 337
           DI  +N LI G CK+  +  A E+                          R + + V+I 
Sbjct: 666 DIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIIL 725

Query: 338 ---------ADVVTYNIMIHALCADGKMDKA 359
                     D VTYN M+  +C+D  +D+A
Sbjct: 726 DQLISAGIVPDTVTYNTMLSGICSD-ILDRA 755



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/360 (28%), Positives = 181/360 (50%), Gaps = 11/360 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC--KPN 59
           EA  L  +L   G   +V  +N+LI    R G    A   +  M        V C   P+
Sbjct: 440 EAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIM--------VRCGFTPS 491

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           + T  +++ GLC++G++ +A+ L  +M ++    N V Y  L+ G+   N+   A+ L+ 
Sbjct: 492 SSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWK 551

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM ++G+ P+ V+F  +++ L K G ++EA  +   M  IG  PN F YN+L+ G C  G
Sbjct: 552 EMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCG 611

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           RV  A +L   M   G   + F+++I+I+G+C+  +++ A+  + +M   G+ PD+  +N
Sbjct: 612 RVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFN 671

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G  +   +  A ++ ++M   G+  D   Y T++ G C+   + +AV +   L   
Sbjct: 672 ILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISA 731

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   YN ++ G+C S  L  A  L   L +   I +V+T N+++   C  G  +KA
Sbjct: 732 GIVPDTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKA 790



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 187/404 (46%), Gaps = 45/404 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +R  G  P + +   L+  L R G       LF++M           +P+ +
Sbjct: 195 EALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFKGP------RPSNL 248

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY-ANDWNEAKCLFIE 120
           T+  +I G C++  V   + L   M     +P+VVT+N LI+  C     W     L + 
Sbjct: 249 TFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHL- 307

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV+P+V +F  I++ LC+ G + EA +L + +  +G+ PNA +YNTLMDG+     
Sbjct: 308 MVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKARE 367

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG---------------------- 218
           V +A  L+  M + G   +  +++IL+ G+ K   IE                       
Sbjct: 368 VAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDV 427

Query: 219 -------------ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE-RAFKLFDEMQRH 264
                        A+ L  E+L KG+   VV +N+L IG +    +E +AF+ +  M R 
Sbjct: 428 MVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSL-IGAYSRAGLEDKAFEAYRIMVRC 486

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G    +    + + GLC+ G++ EA  L   +    + ++  AY  L+DG  K   L+ A
Sbjct: 487 GFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGA 546

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             L++ +    +  D V +  +I  L   G +++A ++FL+M A
Sbjct: 547 QFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSA 590



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 142/295 (48%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++ G    G   +A E+   M+   + P + +   L+       D+     LF +M+ +
Sbjct: 182 TLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIFK 241

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +P+ ++FN ++   C+  ++     LL LM +    P+   +N L++  C+ GR   A
Sbjct: 242 GPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVA 301

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +    M   G + +V +++ +++  C+   +  A  L+  +   GI P+  IYNTL  G
Sbjct: 302 IDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDG 361

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            F+  +V +A  L++EM+  GV+ D   +   + G  K G I ++  L + L +    LD
Sbjct: 362 YFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLD 421

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              Y+ ++  LC +GRL  A +L + L    L   VV +N +I A    G  DKA
Sbjct: 422 SSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKA 476



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 127/271 (46%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           N+L+ GF       EA  +   M   GV+P + S  +++  L + G      +L + MI 
Sbjct: 181 NTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMIF 240

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G RP+   +N ++ GFC   RV   E L   M    C  +V +++ILIN  C       
Sbjct: 241 KGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWV 300

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+     M+  G++P V  + T+   L     V  A KLFD +Q  G+A +   Y T +D
Sbjct: 301 AIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMD 360

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G  K   + +A  L+  +R      D   +N L+ G  K GR++ +  L + L    L  
Sbjct: 361 GYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFL 420

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D   Y++M+ +LC  G++D+A  L  ++  K
Sbjct: 421 DSSLYDVMVSSLCWAGRLDEAMKLLQELLEK 451



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 95/235 (40%), Gaps = 35/235 (14%)

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           V NTL+ GF   G    A E+   M  +G +  + S +IL+    +  +      L+ +M
Sbjct: 179 VLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDM 238

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQV---ERAFKLFDE----------------------- 260
           + KG +P  + +N +  G    H+V   E    L  +                       
Sbjct: 239 IFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRT 298

Query: 261 ---------MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
                    M R GV      + T +  LC+ G +VEA +LF  ++ +    +   YN L
Sbjct: 299 WVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTL 358

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +DG  K+  +  A  L+  +    +  D VT+NI++      G+++ +  L  D+
Sbjct: 359 MDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDL 413



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/142 (21%), Positives = 59/142 (41%), Gaps = 40/142 (28%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  K+   G +P++ TYNT ++G CR      A+ + +++ +     G+V  P+TVT
Sbjct: 686 AGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISA----GIV--PDTVT 739

Query: 63  YTTIIDGLC----------------------------------KEGFVDKAKELFLKMKD 88
           Y T++ G+C                                  K+G  +KA     K+++
Sbjct: 740 YNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHFCKQGMPEKALIWGQKLRE 799

Query: 89  ENINPNVVTYNSLIHGFCYAND 110
            +   + ++Y  L   +C   D
Sbjct: 800 ISFGFDEISYRILDQAYCLMQD 821


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 185/364 (50%), Gaps = 7/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   L   GC+     Y T++ GL   GH   A +LF+EM   +        P+  T
Sbjct: 64  ALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRD------VFPDVAT 117

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++  LC++G + ++  L  K+    ++ N  T N  I G C      EA  L +E M
Sbjct: 118 FNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVAL-VESM 176

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D  + P+VV++N +M  LCK+ K+ EA++ L  M+  G  P+ F YNT++DG+C    + 
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL       G   +  +Y  LING C   ++E AL L++E  +K +KPD+V+YN+L 
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLV 296

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL     +  A ++ +EM   G   D W Y   I+GLCK G I +A  +     +  Y 
Sbjct: 297 KGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYL 356

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  +N +IDG CK  +L  A +L   +    +  D +TYN +++ LC  GK  +  + 
Sbjct: 357 PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNET 416

Query: 363 FLDM 366
           F +M
Sbjct: 417 FEEM 420



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 190/369 (51%), Gaps = 7/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME+ AL  K+   G   N FT N  I GLC  G    A+ L E M            P+ 
Sbjct: 132 MESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-------DAYIAPDV 184

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ GLCK+  V +A +   +M ++   P+  TYN++I G+C  +   EA  L  +
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G  P+ V++  ++N LC  G ++ A  L        ++P+  VYN+L+ G C  G 
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++   M   GC  ++++Y+I+ING CK   I  A  + ++ + KG  PDV  +NT
Sbjct: 305 ILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNT 364

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G  +  +++ A +L + M  +G+A D   Y + ++GLCK G   E  E F  + +  
Sbjct: 365 MIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKG 424

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   YN LI+  CK  +L+ A  +   + +  L+ D +++N +IH  C +G +D A 
Sbjct: 425 CRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAY 484

Query: 361 DLFLDMEAK 369
            LF  ++ K
Sbjct: 485 LLFQKLDEK 493



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 195/368 (52%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA    ++   GC P+ FTYNT+I+G C+      A  L ++        G V  P+ V
Sbjct: 202 EAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFK----GFV--PDRV 255

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I+GLC EG V++A ELF + + +++ P++V YNSL+ G C       A  +  EM
Sbjct: 256 TYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEM 315

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P++ ++N+++N LCK G + +A+ ++   I  G  P+ F +NT++DG+C   ++
Sbjct: 316 VEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKL 375

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G   +  +Y+ ++NG CK  + +     + EM+ KG +P+ + YN L
Sbjct: 376 DSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 435

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +I+Q+E A  +   M + G+  DT ++ T I G C+NG +  A  LF+ L    Y
Sbjct: 436 IENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 495

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 +N LI        +++A ++F  +       D+ TY +++   C    +D+A  
Sbjct: 496 SATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYV 555

Query: 362 LFLDMEAK 369
              +M +K
Sbjct: 556 HLAEMVSK 563



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 185/360 (51%), Gaps = 7/360 (1%)

Query: 1   MEAAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A   +K  +F G  P+  TY +LINGLC  G    AL LF E    +       KP+
Sbjct: 235 LQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD------LKPD 288

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y +++ GLC++G +  A ++  +M ++  +P++ TYN +I+G C   + ++A  +  
Sbjct: 289 LVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMN 348

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           + + +G  P+V +FN +++  CK  K+D A +L+E M   G+ P+A  YN++++G C  G
Sbjct: 349 DAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAG 408

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +     E F  M   GC+ N  +Y+ILI  +CK  ++E A  +   M   G+ PD + +N
Sbjct: 409 KAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFN 468

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  G      ++ A+ LF ++   G +A    +   I        +  A ++F  +   
Sbjct: 469 TLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISK 528

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            Y+ D+  Y  L+DG CK+  +  A+     +     +  + T+  ++++L  + ++ +A
Sbjct: 529 GYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEA 588



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 171/335 (51%), Gaps = 22/335 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P+++TYN +INGLC+ G+ +  A+ + + +  G         P+  T+ T+IDG CK
Sbjct: 319 GCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGY-------LPDVFTFNTMIDGYCK 371

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +D A +L  +M    I P+ +TYNS+++G C A    E    F EM+ +G +PN ++
Sbjct: 372 RLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAIT 431

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N+++   CK  +++EAS ++  M Q G+ P+   +NTL+ GFC  G ++ A  LF  ++
Sbjct: 432 YNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLD 491

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G      +++ILI  Y     ++ A  ++ EM+SKG KPD+  Y  L  G  +   V+
Sbjct: 492 EKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVD 551

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-----------RILKY 301
           RA+    EM   G       +   ++ L  N  + EAV +   +            IL  
Sbjct: 552 RAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEVVDTILST 611

Query: 302 E-LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
           +  +I A   L++ L K G   I++  +  L  GV
Sbjct: 612 DKKEIAAPKILVEELMKKGH--ISYPTYEVLHEGV 644



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 139/299 (46%), Gaps = 1/299 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C P    Y  I+D L    + D+A +++++M    + P+  T+   I  FC     + A 
Sbjct: 6   CPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVAL 65

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L   + ++G     +++  ++  L  +G   +A  L + M++  V P+   +N ++   
Sbjct: 66  RLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHAL 125

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G +  +  L   +   G   N F+ +I I G C+   +E A++L  E +   I PDV
Sbjct: 126 CQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV-ESMDAYIAPDV 184

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V YNTL  GL +  +V+ A +    M   G   D + Y T IDG CK   + EA EL + 
Sbjct: 185 VTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKD 244

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
                +  D   Y  LI+GLC  G ++ A ELF       L  D+V YN ++  LC  G
Sbjct: 245 AIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 36/280 (12%)

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P   ++N IM+ L      D+A ++   M+  GV P+A  +   +  FC+TGR + A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF-- 242
             L  S+   GC     +Y  ++ G   +     A  L+ EML + + PDV  +N +   
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124

Query: 243 ---------------------------------IGLFEIHQVERAFKLFDEMQRHGVAAD 269
                                             GL E  ++E A  L + M  + +A D
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPD 183

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y T + GLCK+  + EA +  R +       D   YN +IDG CK   L+ A EL +
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                  + D VTY  +I+ LCA+G +++A +LF + +AK
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAK 283


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 199/384 (51%), Gaps = 34/384 (8%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+VF YN ++ GLC+      A  LF+EM   N        PNTVTY T+IDG CK 
Sbjct: 187 GMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN------MVPNTVTYNTLIDGYCKV 240

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP----- 128
           G +++A     +MK++N+  N+VTYNSL++G C +   ++A+ + +EM   G  P     
Sbjct: 241 GGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLS 300

Query: 129 -----------------------NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
                                  +  ++ +++N LC+ G++++A  +L  +++ GV P+ 
Sbjct: 301 FVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSK 360

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             YN L++ +C  G V +A      ME  G + N  +++ +I+ +C+  E++ A +    
Sbjct: 361 ISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRR 420

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+ KG+ P V  YN+L  G  +     R F+  DEM + G+  +  +Y + I+ LCK+  
Sbjct: 421 MVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRK 480

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           +++A  +   +       +   YN LI+  C   +LK A+  F  + +  + A +VTYN 
Sbjct: 481 LIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNT 540

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           +I+ L  +G++ KA DLFL M  K
Sbjct: 541 LINGLGRNGRVKKAEDLFLQMAGK 564



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 205/390 (52%), Gaps = 24/390 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNL------------------FE 43
           EA     +++    E N+ TYN+L+NGLC +G    A  +                  F+
Sbjct: 245 EALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFD 304

Query: 44  EMANGNGEFGVV----CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 99
           + +NG G+ G+      + +  TY  +++GLC+ G ++KA+E+  K+ +  + P+ ++YN
Sbjct: 305 DHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYN 364

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            L++ +C   D  +A     +M ++G++PN ++FN ++++ C+ G++D A   +  M++ 
Sbjct: 365 ILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEK 424

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           GV P    YN+L++G+   G   R  E    M+  G K NV SY  LIN  CK++++  A
Sbjct: 425 GVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDA 484

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             + ++M+ +G+ P+  IYN L      + +++ AF+ FDEM + G+ A    Y T I+G
Sbjct: 485 EIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLING 544

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           L +NG + +A +LF  +       D+  YN LI G  KS   +   EL+  +    +   
Sbjct: 545 LGRNGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPT 604

Query: 340 VVTYNIMIHALCADG--KMDKARDLFLDME 367
           V T++ +I+A   +G   MDK     L M+
Sbjct: 605 VGTFHPLIYACRKEGVVTMDKMFQEMLQMD 634



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 193/370 (52%), Gaps = 11/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  KL   G  P+  +YN L+N  C+ G    A+   E+M     E G+  +PN +
Sbjct: 343 KAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQME----ERGL--EPNRI 396

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL-FIE 120
           T+ T+I   C+ G VD A+    +M ++ ++P V TYNSLI+G  Y    +  +C  F++
Sbjct: 397 TFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLING--YGQKGHFVRCFEFLD 454

Query: 121 MMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            MD+ G++PNV+S+  ++N LCK+ K+ +A  +L  MI  GV PNA +YN L++  C   
Sbjct: 455 EMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLS 514

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  A   F  M   G    + +Y+ LING  +N  ++ A  L+ +M  KG  PDV+ YN
Sbjct: 515 KLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITYN 574

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  G  +    ++  +L+D+M+  G+      +   I   C+   +V   ++F+ +  +
Sbjct: 575 SLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA-CRKEGVVTMDKMFQEMLQM 633

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   YN +I    + G +  A  L + +    +  D VTYN +I A   D ++ + 
Sbjct: 634 DLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILAYLRDRRVSEI 693

Query: 360 RDLFLDMEAK 369
           + L  DM+AK
Sbjct: 694 KHLVDDMKAK 703



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 171/382 (44%), Gaps = 42/382 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPN  T+NT+I+  C TG    A      M     E GV   P   TY ++I+G  ++
Sbjct: 390 GLEPNRITFNTVISKFCETGEVDHAETWVRRMV----EKGV--SPTVETYNSLINGYGQK 443

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +  E   +M    I PNV++Y SLI+  C      +A+ +  +M+ +GV PN   +
Sbjct: 444 GHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIY 503

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++   C   K+ +A R  + MIQ G+      YNTL++G    GRV +AE+LF+ M  
Sbjct: 504 NMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAG 563

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP-------------------- 233
            GC  +V +Y+ LI+GY K+   +  L LY +M   GIKP                    
Sbjct: 564 KGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACRKEGVVTM 623

Query: 234 --------------DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
                         D  +YN +     E   V +A  L  +M   GV  D   Y + I  
Sbjct: 624 DKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLILA 683

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIA 338
             ++  + E   L   ++       +  YN LI GLC       A+  +R +  RG+L+ 
Sbjct: 684 YLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLN 743

Query: 339 DVVTYNIMIHALCADGKMDKAR 360
             + Y  +I  L  +G + +A+
Sbjct: 744 VSMCYQ-LISGLREEGMLREAQ 764



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 34/393 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+  +R  G  P+  + N L+  L  + H    L +F ++ +         +P+ V
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSG------TRPDAV 158

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   +        +DK  EL   M  + + P+V  YN ++ G C      +A+ LF EM
Sbjct: 159 AYGKAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEM 218

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + PN V++N +++  CK G ++EA    E M +  V  N   YN+L++G C +GRV
Sbjct: 219 IQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRV 278

Query: 182 NRAEELFVSMESMGCKHNVF----------------------------SYSILINGYCKN 213
           + A E+ + ME  G     F                            +Y IL+NG C+ 
Sbjct: 279 DDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRV 338

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             IE A  + ++++  G+ P  + YN L     +   V++A    ++M+  G+  +   +
Sbjct: 339 GRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITF 398

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            T I   C+ G +  A    R +        +  YN LI+G  + G     +E    + +
Sbjct: 399 NTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDK 458

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             +  +V++Y  +I+ LC D K+  A  +  DM
Sbjct: 459 AGIKPNVISYGSLINCLCKDRKLIDAEIVLADM 491



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 143/298 (47%), Gaps = 18/298 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN   YN LI   C       A   F+EM               VTY T+I+GL + 
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSG------IDATLVTYNTLINGLGRN 548

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL--FIEMMDQGVQPNVV 131
           G V KA++LFL+M  +  NP+V+TYNSLI G  YA   N  KCL  + +M   G++P V 
Sbjct: 549 GRVKKAEDLFLQMAGKGCNPDVITYNSLISG--YAKSVNTQKCLELYDKMKILGIKPTVG 606

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +F+ ++   C+   +    ++ + M+Q+ + P+ FVYN ++  +   G V +A  L   M
Sbjct: 607 TFHPLIYA-CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQM 665

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G   +  +Y+ LI  Y +++ +     L  +M +KG+ P V  YN L  GL ++   
Sbjct: 666 VDQGVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDF 725

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
             A+  + EM   G+  +       I GL + G + EA       +I+  EL I   N
Sbjct: 726 NGAYFWYREMVERGLLLNVSMCYQLISGLREEGMLREA-------QIVSSELSIGGLN 776



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 143/284 (50%), Gaps = 7/284 (2%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A +L+  M+ +   P+  + N L+     +  + +   +F +++D G +P+ V++  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
            +        +D+   L++ M++ G+ P+ F YN ++ G C   R+  A +LF  M    
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              N  +Y+ LI+GYCK   IE AL     M  + ++ ++V YN+L  GL    +V+ A 
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++  EM+  G     +    F D    NG   + +   + +RI     D R Y  L++GL
Sbjct: 283 EVLLEMEGSGFLPGGFLSFVFDDH--SNGAGDDGLFDGKEIRI-----DERTYCILLNGL 335

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           C+ GR++ A E+   L    +    ++YNI+++A C +G + KA
Sbjct: 336 CRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKA 379



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 95/188 (50%)

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A +L+ +M   G   +  S + L+     ++  E  L+++++++  G +PD V Y  
Sbjct: 103 LDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGK 162

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                  +  +++ F+L   M + G+    +AY   + GLCK   I +A +LF  +    
Sbjct: 163 AVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRN 222

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              +   YN LIDG CK G ++ A      +    +  ++VTYN +++ LC  G++D AR
Sbjct: 223 MVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAR 282

Query: 361 DLFLDMEA 368
           ++ L+ME 
Sbjct: 283 EVLLEMEG 290


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 194/359 (54%), Gaps = 8/359 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L ++++  G  PN  TYN L++G C+      A  + E M  G G       P+  TY T
Sbjct: 268 LLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMT-GKGML-----PDVWTYNT 321

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD-Q 124
           ++ GLC EG +D+A  L  KM+   + P+VVTYN+LI G C+ +  ++A    +E M  +
Sbjct: 322 MVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDG-CFEHRGSDAAFKLVEEMKAR 380

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV+ N V+ N+++   C  GK+DEAS ++  M++ G  P+ F YNT+++G+C  G++  A
Sbjct: 381 GVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEA 440

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ++   M   G K + F+ + L++  C  K+++ A +L  +   +G   D V Y TL +G
Sbjct: 441 YKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMG 500

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
            F+  Q +RA KL++EM+  G+ A    Y T I GLC +G   +AV+    L       D
Sbjct: 501 YFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPD 560

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
               N +I G C  G ++ A++    +    L  D+ T NI++  LC +G ++K   LF
Sbjct: 561 ESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLF 619



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA +   +   G  P+V+TYNT++ GLC  G    A+ L ++M +    F +V  P+ V
Sbjct: 299 EAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMES----FKLV--PDVV 352

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG  +    D A +L  +MK   +  N VT+N +I  FC     +EA  + ++M
Sbjct: 353 TYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKM 412

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P+  ++N ++N  CK GKM EA ++++ M + G++ + F  NTL+   CL  ++
Sbjct: 413 VESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQL 472

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L +     G   +  +Y  LI GY K+++ + AL L+ EM   GI   ++ YNT+
Sbjct: 473 DDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTI 532

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    + ++A    +E+   G+  D       I G C  G + +A +    +     
Sbjct: 533 IRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSL 592

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI   N L+ GLC+ G L+    LF +        D VTYNI+I + C + +++ A D
Sbjct: 593 KPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFD 652

Query: 362 LFLDMEAK 369
           L  +ME K
Sbjct: 653 LMTEMEGK 660



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 182/369 (49%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  L  K+  F   P+V TYNTLI+G      +  A  L EEM A G        K N 
Sbjct: 334 EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARG-------VKENG 386

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT+  +I   C EG +D+A  + +KM +   +P+  TYN++I+G+C A    EA  +  E
Sbjct: 387 VTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDE 446

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ +  + N +++ +C   ++D+A  L     + G   +   Y TL+ G+    +
Sbjct: 447 MGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQ 506

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +RA +L+  M+  G    + +Y+ +I G C + + + A+   +E+L KG+ PD    N 
Sbjct: 507 ADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNI 566

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G      VE+AF+  ++M  H +  D +     + GLC+ G + + + LF T     
Sbjct: 567 IIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG 626

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             +D   YN +I   CK  RL+ A++L   +    L  D  TYN ++  L   G+ ++A 
Sbjct: 627 KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAE 686

Query: 361 DLFLDMEAK 369
            L L    K
Sbjct: 687 KLALKFAEK 695



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/316 (30%), Positives = 161/316 (50%), Gaps = 3/316 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDK---AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
           +PN +T  T+++ L +         ++E+F       + PNV T+N LIHG+C  N+  E
Sbjct: 170 RPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNNTEE 229

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A  L  +M + G  P+ V++N ++  LCK  ++ +   LL  M   G+ PN   YN L+ 
Sbjct: 230 ALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVH 289

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C    +  A E+   M   G   +V++Y+ ++ G C   +I+ A+ L  +M S  + P
Sbjct: 290 GYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVP 349

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV YNTL  G FE    + AFKL +EM+  GV  +   +   I   C  G I EA  + 
Sbjct: 350 DVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVM 409

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +    +  D   YN +I+G CK+G++  A+++   + R  L  D  T N ++H +C +
Sbjct: 410 VKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLE 469

Query: 354 GKMDKARDLFLDMEAK 369
            ++D A  L +    +
Sbjct: 470 KQLDDAYTLTMKARKR 485



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 190/365 (52%), Gaps = 9/365 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRT--GHTIV-ALNLFEEMANGNGEFGVVCKPNTVT 62
           +F K++     PN+ T NTL+N L R+   H++V +  +F++      + GV  +PN  T
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAV----KLGV--QPNVNT 213

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I G C +   ++A  L  +M +    P+ VTYN+++   C  +   + + L ++M 
Sbjct: 214 FNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMK 273

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN  ++N++++  CK   + EA+ ++ELM   G+ P+ + YNT++ G C  G+++
Sbjct: 274 NSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKID 333

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   MES     +V +Y+ LI+G  +++  + A  L  EM ++G+K + V +N + 
Sbjct: 334 EAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMI 393

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                  +++ A  +  +M   G + D + Y T I+G CK G + EA ++   +     +
Sbjct: 394 KWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLK 453

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LD    N L+  +C   +L  A+ L     +   I D VTY  +I     D + D+A  L
Sbjct: 454 LDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKL 513

Query: 363 FLDME 367
           + +M+
Sbjct: 514 WEEMK 518



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 174/355 (49%), Gaps = 21/355 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ + +K+   G  P+ FTYNT+ING C+ G    A  + +EM    G  G+  K +T 
Sbjct: 404 EASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEM----GRKGL--KLDTF 457

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T  T++  +C E  +D A  L +K +      + VTY +LI G+      + A  L+ EM
Sbjct: 458 TLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM 517

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+   ++++N I+  LC +GK D+A   L  +++ G+ P+    N ++ G+C  G V
Sbjct: 518 KETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAV 577

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +    M     K ++F+ +IL+ G C+   +E  L+L++  +SKG   D V YN +
Sbjct: 578 EKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNII 637

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +  ++E AF L  EM+   +  D + Y   + GL K G   EA +L   L+  + 
Sbjct: 638 ISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKL--ALKFAEK 695

Query: 302 ELDIRA-------------YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
              ++              Y+  I  LC  G+ K A +LF+   +  +  +  TY
Sbjct: 696 GQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTY 750



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 140/292 (47%), Gaps = 17/292 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L MK R  G   +  TY TLI G  +      AL L+EEM     E G+V     +
Sbjct: 474 DAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK----ETGIVA--TII 527

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TII GLC  G  D+A +   ++ ++ + P+  T N +IHG+C+     +A     +M
Sbjct: 528 TYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKM 587

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  ++P++ + N+++  LC+ G +++   L    I  G   +   YN ++  FC   R+
Sbjct: 588 VEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRL 647

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-------IKPD 234
             A +L   ME    + + ++Y+ ++ G  K    E A  L  +   KG         P+
Sbjct: 648 EDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQDTSPE 707

Query: 235 V----VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           +    ++Y+     L    + + A KLF + ++ GV+ + + Y   +DGL K
Sbjct: 708 LGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLK 759



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/217 (29%), Positives = 105/217 (48%), Gaps = 3/217 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNR---AEELFVSMESMGCKHNVFSYSILINGYCK 212
           M ++  RPN    NTL++    +   +    + E+F     +G + NV +++ILI+GYC 
Sbjct: 164 MKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCS 223

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +   E AL L ++M   G  PD V YNT+   L +  Q+ +   L  +M+  G+  +   
Sbjct: 224 DNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNT 283

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   + G CK  ++ EA E+   +       D+  YN ++ GLC  G++  A  L   + 
Sbjct: 284 YNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKME 343

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              L+ DVVTYN +I         D A  L  +M+A+
Sbjct: 344 SFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKAR 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 118/276 (42%), Gaps = 52/276 (18%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ +++  G    + TYNT+I GLC +G T  A++   E+     E G+V  P+  T
Sbjct: 510 ALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELL----EKGLV--PDEST 563

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              II G C EG V+KA +   KM + ++ P++ T N L+ G C      +   LF   +
Sbjct: 564 SNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWI 623

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   + V++N+I++  CK  ++++A  L+  M    + P+ + YN ++ G    GR  
Sbjct: 624 SKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTE 683

Query: 183 RAEEL----------------------------------------------FVSMESMGC 196
            AE+L                                              F   E  G 
Sbjct: 684 EAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGV 743

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             N ++Y  L++G  K ++     SL   M+S  I+
Sbjct: 744 SLNKYTYIKLMDGLLKRRKSFTTTSLLPFMVSATIQ 779



 Score = 84.3 bits (207), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 3/203 (1%)

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG---ALSLYSE 225
           +T +  + ++ + +   ++F  M+ +  + N+ + + L+N   ++        +  ++ +
Sbjct: 142 DTSLAAYVISKQPHLGHQIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQD 201

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
            +  G++P+V  +N L  G    +  E A +L ++M  +G   D   Y T +  LCK   
Sbjct: 202 AVKLGVQPNVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQ 261

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + +  +L   ++      +   YN L+ G CK   LK A E+   +    ++ DV TYN 
Sbjct: 262 LTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNT 321

Query: 346 MIHALCADGKMDKARDLFLDMEA 368
           M+  LC +GK+D+A  L   ME+
Sbjct: 322 MVRGLCDEGKIDEAVRLRDKMES 344


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 195/365 (53%), Gaps = 10/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++ + G  P+V+TYN +I+G C++G    AL + + +   NG     C P+  
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG-----CNPDDW 355

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLC  G +D+A+EL          P V+T+ +LI+G+C A   ++A  +   M
Sbjct: 356 TYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +    + ++ ++ V++N L K  ++ EA   L  M   G+ PN  +Y +++DG+C  G V
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMV 474

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+F  ME  GC  N ++Y  LI G  ++K++  A++L ++M   GI P V+ Y TL
Sbjct: 475 GAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTL 534

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + H+ + AF+LF+ M+++G+  D  AY    D LCK+G   EA        ++  
Sbjct: 535 IQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV-- 592

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L    Y  L+DG  K+G    A  L   +      AD+ TY++++ ALC   K+++A  
Sbjct: 593 -LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALS 651

Query: 362 LFLDM 366
           +   M
Sbjct: 652 ILDQM 656



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 179/361 (49%), Gaps = 7/361 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F  LR  G + + +T N L+ G CRT     A  L   M        + C+ N  +YT +
Sbjct: 202 FCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPL------MGCRRNEYSYTIL 255

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I GL +   V +A  L   M  +  + N+  Y  LI G C     ++A+ L  EM  +GV
Sbjct: 256 IQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGV 315

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            P+V ++N +++  CK+G+M +A  +  LM Q G  P+ + YN+L+ G C  G+++ AEE
Sbjct: 316 VPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEE 374

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           L     + G    V +++ LINGYCK + I+ AL + S M+S   K D+  Y  L   L 
Sbjct: 375 LLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLI 434

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  +++ A +  +EM  +G+A +   Y + IDG CK G +  A+E+F+ +       +  
Sbjct: 435 KKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAW 494

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y  LI GL +  +L  A  L   +    +   V+ Y  +I   C   + D A  LF  M
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMM 554

Query: 367 E 367
           E
Sbjct: 555 E 555



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 170/407 (41%), Gaps = 42/407 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------NGEF 52
           +A AL  K++  G  P V  Y TLI G C+      A  LFE M  NG        N   
Sbjct: 511 KAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLT 570

Query: 53  GVVCKP-----------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
             +CK                    VTYT+++DG  K G  D A  L  KM +E    ++
Sbjct: 571 DALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
            TY+ L+   C     NEA  +  +M   GV+ N+V++ +I++E+ K GK D A  L   
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           MI  G +P+A  Y   +  +C  G++  AE L   ME  G   +V +Y I ING      
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGY 750

Query: 216 IEGALSLYSEMLSKGIKPDVVIY-------------NTLFI---GLFEIHQVERAFKLFD 259
           ++ A S    M+    +P+   Y             N  +I   G++   ++   ++L +
Sbjct: 751 MDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLE 810

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M +HG+      Y + I G CK   + EA  L   +       +   Y  LI   C   
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIK 870

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                      +        + +Y+ +I  LC +G  D+A+ LF D+
Sbjct: 871 LFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDL 917



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 157/364 (43%), Gaps = 22/364 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L  K+   GC+ +++TY+ L+  LC+      AL++ ++M       GV C  N V 
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVS----GVKC--NIVA 667

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT II  + KEG  D AK LF +M      P+  TY   I  +C      EA+ L  EM 
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 727

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG--- 179
             GV P+VV++++ +N     G MD A   L+ M+     PN + Y  L+  F       
Sbjct: 728 RDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN 787

Query: 180 -------------RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                         +N   +L   M   G    V +YS +I G+CK   +E A  L   M
Sbjct: 788 AHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM 847

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L K I P+  IY  L     +I    +      +M   G      +Y   I GLC  G  
Sbjct: 848 LGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDY 907

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             A  LF  L  + Y  +  A+  L DGL K+G +    +L  ++       D  +Y+++
Sbjct: 908 DRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967

Query: 347 IHAL 350
             ++
Sbjct: 968 TDSI 971



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/310 (30%), Positives = 155/310 (50%), Gaps = 1/310 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+TVTY T+I   CK+G +  A   F  +++  +  +  T N+L+ G+C  +D  +A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            + M   G + N  S+ +++  L +   + EA  L+ +M+Q G   N  +Y  L+ G C 
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCK 296

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR++ A  L   M   G   +V++Y+ +I+GYCK+  ++ AL + + M   G  PD   
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN+L  GL    +++ A +L +     G       +   I+G CK   I +A+ +   + 
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +LD++AY  LI+ L K  RLK A E    +    L  +VV Y  +I   C  G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVG 475

Query: 358 KARDLFLDME 367
            A ++F  ME
Sbjct: 476 AALEVFKLME 485



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/244 (31%), Positives = 126/244 (51%), Gaps = 3/244 (1%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L+  ++ +G+ P+ V++N ++   CK G +  A R   L+ + G++ + +  N L+ G+C
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            T  + +A  L + M  MGC+ N +SY+ILI G  + + +  AL L   M+  G   ++ 
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLH 285

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +Y  L  GL +  ++  A  L DEM   GV    W Y   IDG CK+G + +A+ +   +
Sbjct: 286 MYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALCADGK 355
                  D   YN LI GLC  G+L  A EL   ++ RG     V+T+  +I+  C   +
Sbjct: 346 EQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARG-FTPTVITFTNLINGYCKAER 403

Query: 356 MDKA 359
           +D A
Sbjct: 404 IDDA 407



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 140/306 (45%), Gaps = 1/306 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y   +  L +    +   +L+  +  E + P+ VTYN++I  +C       A   F  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+Q +  + N ++   C+   + +A  LL +M  +G R N + Y  L+ G      V 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVR 266

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M   GC  N+  Y++LI G CK   I  A  L  EM  +G+ P V  YN + 
Sbjct: 267 EALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  +++ A  +   M+++G   D W Y + I GLC  G + EA EL        + 
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  +  LI+G CK+ R+  A  +  ++       D+  Y ++I+ L    ++ +A++ 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 363 FLDMEA 368
             +M A
Sbjct: 446 LNEMFA 451


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  201 bits (510), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  ++N +I  LC+ G    A+ +F  M          C P+  TY T++DGLCKE  +
Sbjct: 185 PNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKK------CLPDGYTYCTLMDGLCKEERI 238

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L  +M+ E  +P+ V YN LI G C   D +    L   M  +G  PN V++N +
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTL 298

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC  GK+D+A  LLE M+     PN   Y TL++G     R      L +SME  G 
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGY 358

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + N   YS+LI+G  K  + E A++L+ +M  KG +P++V+Y+ +  GL    +   A +
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + + M   G   + + Y + + G  K G   EA++++R +       +   Y+ LIDGLC
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             GR+K A  ++  +    +  D V Y+ MI  LC  G MD A  L+ +M
Sbjct: 479 GVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEM 528



 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 188/366 (51%), Gaps = 13/366 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +    C P+ +TY TL++GLC+      A+ L +EM +        C P+ V 
Sbjct: 206 AIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG------CSPSPVI 259

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +IDGLCK+G + +  +L   M  +   PN VTYN+LIHG C     ++A  L   M+
Sbjct: 260 YNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
                PN V++  ++N L K  +  + +RLL  M + G R N  +Y+ L+ G    G+  
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAE 379

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L+  M   GC+ N+  YS +I+G C+  +   A  + + M+S G  P+V  Y++L 
Sbjct: 380 EAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLM 439

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+    E A +++ EM   G + + + Y   IDGLC  G + EA+ ++  +  +  +
Sbjct: 440 KGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIK 499

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSL-----PRGVLIADVVTYNIMIHALCADGKMD 357
            D  AY+ +I GLC  G +  A +L+  +     P+     DVVTYNI++  LC    + 
Sbjct: 500 PDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVTYNILLDGLCMQKDVS 557

Query: 358 KARDLF 363
           +A DL 
Sbjct: 558 RAVDLL 563



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/363 (33%), Positives = 186/363 (51%), Gaps = 15/363 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +++  GC P+   YN LI+GLC+ G       L + M      F   C PN V
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNM------FLKGCFPNEV 293

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GLC +G +DKA  L  +M      PN VTY +LI+G        +   L I M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISM 353

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G + N   ++V+++ L K GK +EA  L + M + G RPN  VY+ ++DG C  G+ 
Sbjct: 354 EERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKP 413

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A+E+   M S GC  NV++YS L+ G+ K    E A+ ++ EM   G   +   Y+ L
Sbjct: 414 NEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVL 473

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL---RI 298
             GL  + +V+ A  ++ +M   G+  DT AY + I GLC  G +  A++L+  +     
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEE 533

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL------CA 352
            K + D+  YN L+DGLC    +  A +L   +       DV+T N  ++ L      C 
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCE 593

Query: 353 DGK 355
           +G+
Sbjct: 594 EGR 596



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 156/314 (49%), Gaps = 30/314 (9%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+ A L + +   G   N   Y+ LI+GL + G    A+ L+++MA         C+PN 
Sbjct: 344 MDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKG------CRPNI 397

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y+ +IDGLC+EG  ++AKE+   M      PNV TY+SL+ GF       EA  ++ E
Sbjct: 398 VVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWRE 457

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G   N   ++V+++ LC  G++ EA  +   M+ IG++P+   Y++++ G C  G 
Sbjct: 458 MDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGS 517

Query: 181 VNRAEELFVSM---ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           ++ A +L+  M   E    + +V +Y+IL++G C  K++  A+ L + ML +G  PDV+ 
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVIT 577

Query: 238 YNT---------------------LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            NT                     L   L +  +V  A K+ + M    +A  T  +   
Sbjct: 578 CNTFLNTLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKYLAPKTSTWAMI 637

Query: 277 IDGLCKNGYIVEAV 290
           +  +CK   I  A+
Sbjct: 638 VPEICKPKKINAAI 651



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 167/334 (50%), Gaps = 9/334 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN----P 93
           A++LF  M +   EF   CK +  ++ ++++ +  EG   +  E +  + + N+N    P
Sbjct: 131 AVDLFHRMVD---EFR--CKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N +++N +I   C     + A  +F  M ++   P+  ++  +M+ LCK  ++DEA  LL
Sbjct: 186 NGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G  P+  +YN L+DG C  G ++R  +L  +M   GC  N  +Y+ LI+G C  
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLK 305

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +++ A+SL   M+S    P+ V Y TL  GL +  +     +L   M+  G   +   Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIY 365

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I GL K G   EA+ L++ +       +I  Y+ +IDGLC+ G+   A E+   +  
Sbjct: 366 SVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMIS 425

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              + +V TY+ ++      G  ++A  ++ +M+
Sbjct: 426 SGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMD 459



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/310 (28%), Positives = 150/310 (48%), Gaps = 5/310 (1%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNS----LIHGFCYANDWNEAKC 116
           ++  +     K    +KA +LF +M DE     +V ++NS    +I+   Y         
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +    M+  + PN +SFN+++  LCK G +D A  +   M +    P+ + Y TLMDG C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R++ A  L   M+S GC  +   Y++LI+G CK  ++     L   M  KG  P+ V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YNTL  GL    ++++A  L + M       +   Y T I+GL K    ++   L  ++
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISM 353

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               Y L+   Y+ LI GL K G+ + A  L++ +       ++V Y+ +I  LC +GK 
Sbjct: 354 EERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKP 413

Query: 357 DKARDLFLDM 366
           ++A+++   M
Sbjct: 414 NEAKEILNGM 423



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 144/316 (45%), Gaps = 11/316 (3%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI---HGFCYANDWNEAKCLF 118
           T +++I+     G     ++L  +++ EN    V+   S I     +  A+   +A  LF
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLEN---RVIIERSFIVVFRAYGKAHLPEKAVDLF 135

Query: 119 IEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ----IGVRPNAFVYNTLMD 173
             M+D+   + +V SFN ++N +   G         + ++     + + PN   +N ++ 
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
             C  G V+RA E+F  M    C  + ++Y  L++G CK + I+ A+ L  EM S+G  P
Sbjct: 196 ALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
             VIYN L  GL +   + R  KL D M   G   +   Y T I GLC  G + +AV L 
Sbjct: 256 SPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLL 315

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +   K   +   Y  LI+GL K  R      L  S+       +   Y+++I  L  +
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKE 375

Query: 354 GKMDKARDLFLDMEAK 369
           GK ++A  L+  M  K
Sbjct: 376 GKAEEAMTLWKKMAEK 391



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 46/196 (23%), Positives = 87/196 (44%), Gaps = 14/196 (7%)

Query: 184 AEELFVSMESMGC-KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +E++F S   MG  K    + S +I  Y       G  +   ++LS+    + VI    F
Sbjct: 60  SEQMFKSAPKMGSFKLGDSTLSSMIENYAN----LGDFASVEKLLSRIRLENRVIIERSF 115

Query: 243 IGLF----EIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           I +F    + H  E+A  LF  M           ++ + ++ +   G     +E +  + 
Sbjct: 116 IVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175

Query: 298 ILKYELDIR----AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
                ++I     ++N +I  LCK G +  A E+FR +P    + D  TY  ++  LC +
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKE 235

Query: 354 GKMDKARDLFLDMEAK 369
            ++D+A  L  +M+++
Sbjct: 236 ERIDEAVLLLDEMQSE 251


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  201 bits (510), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 199/397 (50%), Gaps = 33/397 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA  LF+ ++  GC PNV  +  LI+GLC++G    A  LF+ M                
Sbjct: 271 EALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 48  -GNGEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G  + G +              C P+  TY T+I GLC +   ++A+EL      E   
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFT 389

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P VVT+ +LI+G+C A  +++A  +  +MM    + ++  F  ++N L K  ++ EA  L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G+ PN   Y +++DG+C +G+V+ A E+   ME  GC+ N ++Y+ L+ G  K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +K++  A++L ++M   GI P+V+ Y TL  G  + H  + AF+LF+ M+++G+  D  A
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y    D LCK G   EA        +    L    Y  LIDG  K+G    A  L   + 
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGV---ALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                 D  TY++++HALC   ++++A  +   M  +
Sbjct: 627 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 169/354 (47%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYNT+I   C+ G    A   F  +  G  E      P T T   ++ G C+ 
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLE------PETFTCNALVLGYCRT 231

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + KA  LFL M       N  +Y  LI G C A    EA  LF+ M   G  PNV +F
Sbjct: 232 GELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAF 291

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++ LCK+G++ +A  L + M Q GV P+   YN ++ G+   GR+N A ++   ME 
Sbjct: 292 TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEK 351

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  + ++Y+ LI G C  K  E A  L +  + +G  P VV +  L  G     + + 
Sbjct: 352 NGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 410

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++ ++M       D   +   I+ L K   + EA EL   +       ++  Y  +ID
Sbjct: 411 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 470

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G CKSG++ IA E+ + + R     +  TYN +++ L  D K+ KA  L   M+
Sbjct: 471 GYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 206/484 (42%), Gaps = 126/484 (26%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  PNV TY ++I+G C++G   +AL + + M          C+PN  
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG------CQPNAW 498

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++ GL K+  + KA  L  KM+ + I PNV+TY +L+ G C  +D++ A  LF EM
Sbjct: 499 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EM 557

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEA------------------------------- 149
           M+Q G++P+  ++ V+ + LCK G+ +EA                               
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDF 617

Query: 150 -SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
            + L+E MI  G  P+++ Y+ L+   C   R+N A  +   M   G K  +F+Y+ILI+
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 677

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +  + + A  +Y+EM S G KP    Y        +  ++E A  L  +M+R GVA 
Sbjct: 678 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 737

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTL-------------------------------- 296
           D   Y   IDG    GYI  A    + +                                
Sbjct: 738 DVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT 797

Query: 297 -----------------RILKYELD--IRAYNCLIDGLCKSGRLKIAWELF--------- 328
                            R++K+ L+  +  Y+ LI G CK+GRL+ A  L          
Sbjct: 798 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 857

Query: 329 --------------------RSLPRGVLIAD------VVTYNIMIHALCADGKMDKARDL 362
                               ++L    ++++      + +Y +++  LC +G  +K + L
Sbjct: 858 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 917

Query: 363 FLDM 366
           F D+
Sbjct: 918 FCDL 921



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 155/321 (48%), Gaps = 34/321 (10%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            ++ ++  + + P+ VTYN++I  +C   D   A   F  +++ G++P   + N ++   
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGY 228

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+ G++ +A  L  +M  +G + N + Y  L+ G C    V  A  LF+ M+  GC  NV
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNV 288

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +++ LI+G CK+  +  A  L+  M   G+ P V+ YN + +G  ++ ++  A K+ + 
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 261 MQRHGVAADTWAYRTFIDGLCK-----------------------------NGYIV---- 287
           M+++G   D W Y T I GLC                              NGY +    
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 288 -EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +A+ +   +   K +LD++ +  LI+ L K  RLK A EL   +    L+ +V+TY  +
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 347 IHALCADGKMDKARDLFLDME 367
           I   C  GK+D A ++   ME
Sbjct: 469 IDGYCKSGKVDIALEVLKMME 489



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 162/364 (44%), Gaps = 22/364 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L  ++   GC P+ +TY+ L++ LC+      AL + ++M+      G+ C      
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR----GIKC--TIFA 671

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +ID + +EG  D AK ++ +M      P+  TY   I+ +C      +A+ L ++M 
Sbjct: 672 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 731

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC------ 176
            +GV P+VV++N++++     G +D A   L+ M+     PN + Y  L+          
Sbjct: 732 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 791

Query: 177 -----LTGRVNRAE-----ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                 +G  N  E     +L   M   G    V +YS LI G+CK   +E A  L   M
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 851

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             KG+ P+  IY  L     +    E+A      M   G      +YR  + GLC  G  
Sbjct: 852 CGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 911

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +   LF  L  L Y  D  A+  L DGL K+G + I +++   + +        TY ++
Sbjct: 912 EKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971

Query: 347 IHAL 350
            + +
Sbjct: 972 TNKM 975



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 22/301 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++ + G +  +F Y  LI+ + R G    A  ++ EM +         KP+  
Sbjct: 652 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPSAT 705

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT  I+  CKEG ++ A++L LKM+ E + P+VVTYN LI G  +    + A      M
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 765

Query: 122 MDQGVQPNVVSFNVIMNELCKNG----------------KMDEASRLLELMIQIGVRPNA 165
           +    +PN  ++ +++  L K                  ++D   +LLE M++ G+ P  
Sbjct: 766 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 825

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y++L+ GFC  GR+  A  L   M   G   N   Y++LI   C  K  E ALS  S 
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 885

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M   G +P +  Y  L +GL      E+   LF ++   G   D  A++   DGL K GY
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945

Query: 286 I 286
           +
Sbjct: 946 V 946



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 22/241 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L +K+   G  P+V TYN LI+G    G+   A +  + M       G  C+PN  
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV------GASCEPNYW 775

Query: 62  TYTTIIDGLCKEGF----------------VDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           TY  ++  L K                   +D   +L  +M    +NP V TY+SLI GF
Sbjct: 776 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 835

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C A    EA  L   M  +G+ PN   + +++   C     ++A   + +M + G +P  
Sbjct: 836 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQL 895

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y  L+ G C  G   + + LF  +  +G  H+  ++ IL +G  K   ++    + S 
Sbjct: 896 ESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSI 955

Query: 226 M 226
           M
Sbjct: 956 M 956


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 111/336 (33%), Positives = 179/336 (53%), Gaps = 11/336 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P    YN  ++ LC++G    A+ + + M +G       CKP+ VT+ T+I GLCK 
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG------ACKPDVVTFNTLIAGLCKA 102

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A+++  +M+      N+VTYN+LI+G   A    EA    + M      P+  ++
Sbjct: 103 GRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQGMTTTPDTQTY 159

Query: 134 NVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM- 191
           N I++  CK+G++D A   LE M Q  G  P+ F Y+ L++G C +  + +A+EL   M 
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI 219

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
               C  +V +++ L++GYCK ++++ A  L S ML  G  PDVV Y+T+  GL     V
Sbjct: 220 GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDV 279

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           ++ F L ++M   G   D   Y   + GLCK G +VEA  L + +       +   Y+ +
Sbjct: 280 DKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLV 339

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            DGLCK  +L +A +L  S+     I DVV +  ++
Sbjct: 340 FDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 174/352 (49%), Gaps = 10/352 (2%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           +TY  L+   C  G    A++L  EM    G       P    Y   +  LCK G V +A
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGM-----APTPSMYNFFVHALCKSGKVPEA 73

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            E+   MKD    P+VVT+N+LI G C A   +EA+ +  EM   G   N+V++N ++N 
Sbjct: 74  MEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLING 133

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKH 198
           L   G+  EA  +++ M      P+   YN ++ GFC +G ++RA      M +  GC  
Sbjct: 134 LSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSP 190

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
           + F+YSILING CK+  +  A  L  EM+  K     VV +NTL  G  +   ++RA +L
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
              M  HG A D   Y T IDGLC+ G + +   L   +     + D+  Y  L+ GLCK
Sbjct: 251 LSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +G++  A  L + +       + VTY+++   LC   K+D A DL   +  K
Sbjct: 311 AGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 13/314 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   ++   C+P+V T+NTLI GLC+ G    A  + +EM      F      N V
Sbjct: 72  EAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG--FAA----NLV 125

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GL   G   ++ E  L M+     P+  TYN++IHGFC + + + A   F+E 
Sbjct: 126 TYNTLINGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYG-FLEE 181

Query: 122 MDQ--GVQPNVVSFNVIMNELCKNGKMDEASRLLELMI-QIGVRPNAFVYNTLMDGFCLT 178
           M Q  G  P+  ++++++N LCK+  + +A  LL+ MI +     +   +NTL+DG+C  
Sbjct: 182 MKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKA 241

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
             ++RA EL  SM   GC  +V +YS +I+G C+  +++   +L  +M+S+G KPDVV Y
Sbjct: 242 QDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTY 301

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L  GL +  ++  A +L   M   G   +   Y    DGLCK   +  A +L  ++R 
Sbjct: 302 TVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD 361

Query: 299 LKYELDIRAYNCLI 312
                D+ A+  L+
Sbjct: 362 KGRITDVVAFEALL 375



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 6/230 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TYN +I+G C++G    A    EEM    G     C P+T TY+ +I+GLCK   +
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNL 208

Query: 77  DKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            KA EL  +M   ++   +VV +N+L+ G+C A D + A+ L   M++ G  P+VV+++ 
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I++ LC+ G +D+   LLE M+  G +P+   Y  L+ G C  G++  A  L   M   G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           C  N  +YS++ +G CK  +++ A  L + +  KG   DVV +  L + +
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSV 378


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 183/352 (51%), Gaps = 6/352 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PN  TYNT+I G C  G    AL++  EM    G       PN  TY T+I G CK G 
Sbjct: 182 RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGG-----IAPNQYTYGTVISGWCKVGR 236

Query: 76  VDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           VD+A ++F +M  +  + P  V YN+LI G+C     + A      M+++GV   V ++N
Sbjct: 237 VDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYN 296

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++++ L  +G+  EA  L+E M   G+  + F YN L++G C  G V +A E+F +M   
Sbjct: 297 LLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRR 356

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G +  V +Y+ LI    K  +++    L+ E + +GI+PD+V+YN L         ++RA
Sbjct: 357 GVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA 416

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           F++  EM++  +A D   Y T + GLC  G + EA +L   +     + D+  YN LI G
Sbjct: 417 FEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISG 476

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               G +K A  +   +        ++TYN +I  LC +G+ D A ++  +M
Sbjct: 477 YSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEM 528



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/362 (32%), Positives = 178/362 (49%), Gaps = 18/362 (4%)

Query: 3   AAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           A ALF    +LR+  C     T+N ++  LC  G    AL L  +M           +PN
Sbjct: 138 AFALFADMFRLRLPLC---TTTFNIMLRHLCSAGKPARALELLRQMP----------RPN 184

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            VTY T+I G C  G V  A ++  +M++   I PN  TY ++I G+C     +EA  +F
Sbjct: 185 AVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVF 244

Query: 119 IEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            EM+ +G V+P  V +N ++   C  GK+D A    + M++ GV      YN L+    +
Sbjct: 245 DEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 304

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR   A EL   M   G   +VF+Y+ILING+CK   ++ AL ++  M  +G++  VV 
Sbjct: 305 DGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y +L   L +  QV+   KLFDE  R G+  D   Y   I+    +G I  A E+   + 
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D   YN L+ GLC  GR+  A +L   + +  +  D+VTYN +I      G + 
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484

Query: 358 KA 359
            A
Sbjct: 485 DA 486



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 149/285 (52%), Gaps = 10/285 (3%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            L+ +MK  ++  +  + + L+     A     A  LF +M    +     +FN+++  L
Sbjct: 109 RLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHL 164

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHN 199
           C  GK    +R LEL+ Q+  RPNA  YNT++ GFC  GRV  A ++   M E  G   N
Sbjct: 165 CSAGK---PARALELLRQMP-RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPN 220

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLF 258
            ++Y  +I+G+CK   ++ A+ ++ EML+KG +KP+ V+YN L  G  +  +++ A    
Sbjct: 221 QYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR 280

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           D M   GVA     Y   +  L  +G   EA EL   +      LD+  YN LI+G CK 
Sbjct: 281 DRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKE 340

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G +K A E+F ++ R  + A VVTY  +I+AL   G++ +   LF
Sbjct: 341 GNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLF 385



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 136/244 (55%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G   +VFTYN LING C+ G+   AL +FE M+      GV  +   V
Sbjct: 310 EAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS----RRGV--RATVV 363

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I  L K+G V +  +LF +     I P++V YN+LI+    + + + A  +  EM
Sbjct: 364 TYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEM 423

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ V++N +M  LC  G++DEA +L++ M + G++P+   YNTL+ G+ + G V
Sbjct: 424 EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDV 483

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M + G    + +Y+ LI G CKN + + A ++  EM+  GI PD   Y +L
Sbjct: 484 KDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISL 543

Query: 242 FIGL 245
             GL
Sbjct: 544 IEGL 547



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 142/277 (51%), Gaps = 6/277 (2%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL- 153
             T+N ++   C A     A    +E++ Q  +PN V++N ++   C  G++  A  ++ 
Sbjct: 154 TTTFNIMLRHLCSAGKPARA----LELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCK 212
           E+  + G+ PN + Y T++ G+C  GRV+ A ++F  M + G  K     Y+ LI GYC 
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL     M+ +G+   V  YN L   LF   +   A++L +EM   G+A D + 
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+G CK G + +A+E+F  +        +  Y  LI  L K G+++   +LF    
Sbjct: 330 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 389

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R  +  D+V YN +I++    G +D+A ++  +ME K
Sbjct: 390 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKK 426



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 20/164 (12%)

Query: 218 GALSLYSEMLS--KGIKPDVVIY----------NTLFIGLFEIHQVERAFKLFDEMQRHG 265
            AL+L+   LS  K + P  V+           N L      +     + +L+  M+   
Sbjct: 59  AALALFKSALSADKALSPLAVLPHLDGAPSSLPNLLLTASAAVRPHATSLRLYSRMKSLS 118

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +   T +    +  L          ++FR    L+  L    +N ++  LC +G+   A 
Sbjct: 119 LPISTASLHPLLSALPSAPAFALFADMFR----LRLPLCTTTFNIMLRHLCSAGKPARAL 174

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           EL R +PR     + VTYN +I   C+ G++  A D+  +M  +
Sbjct: 175 ELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRER 214


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  200 bits (509), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 194/378 (51%), Gaps = 16/378 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF--------- 52
            A  LF  +   GC PNV TY  LI+G C++G    A  ++  M  GN +          
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM-RGNADIPDVDMYFKI 626

Query: 53  --GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
             G +  PN  TY  ++DGLCK   V +A++L   M  E   PN + Y++LI GFC    
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            +EA+ +F +M ++G  PNV +++ +++ L K+ ++D A ++L  M++    PN  +Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++DG C  G+ + A  L   ME  GC  NV +Y+ +I+G+ K  +++  L L  +M +KG
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             P+ V Y  L         ++ A +L DEM++         YR  I+G  +  +I+   
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE-FIISLG 865

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIH 348
            L      +   + I AY  LID  CK+GRL++A EL + +        AD   Y+ +I 
Sbjct: 866 LLDEIAENVAVPI-IPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIE 924

Query: 349 ALCADGKMDKARDLFLDM 366
           +L    K+DKA +L+ DM
Sbjct: 925 SLSLASKVDKAFELYADM 942



 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 195/382 (51%), Gaps = 22/382 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++  ++   G  P+  TY+ +I  LC       A  LFEEM + +    VV  P+  
Sbjct: 463 KAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH----VV--PDVF 516

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +ID  CK G + +A++ F +M  +   PNVVTY +LIH +  A   + A  LF  M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM--------------IQIG-VR-PNA 165
           + +G  PNVV++  +++  CK+G++++A ++   M              I  G +R PN 
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           F Y  L+DG C   +V  A +L   M   GC+ N   Y  LI+G+CK  +++ A  ++++
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M  +G  P+V  Y++L   LF+  +++ A K+   M  +  A +   Y   IDGLCK G 
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
             EA  L   +       ++  Y  +IDG  K+G++    EL R +       + VTY +
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 346 MIHALCADGKMDKARDLFLDME 367
           +I+  CA G +D A  L  +M+
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMK 838



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 178/384 (46%), Gaps = 18/384 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTV 61
           A  L  K+   GC+P    YN LI G+C     + +L++ E      GE        N V
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             + +   LC  G  +KA  +  +M  +   P+  TY+ +I   C A+  + A  LF EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+V ++ ++++  CK G + +A +  + M++ G  PN   Y  L+  +    ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV------ 235
           + A ELF  M S GC  NV +Y+ LI+G+CK+ +IE A  +Y+ M      PDV      
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 236 ----------VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                       Y  L  GL + H+V+ A  L D M   G   +   Y   IDG CK G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA  +F  +    Y  ++  Y+ LID L K  RL +A ++   +       +V+ Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           MI  LC  GK D+A  L   ME K
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEK 770



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 180/368 (48%), Gaps = 28/368 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+   +N+LI+  CR+G    A  L ++M    G+ G  C+P  V Y  +I G+C  
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--CQPGYVVYNILIGGICGN 417

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   ++ A++ + +M D ++  N V  ++L    C A  + +A  +  EMM +G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +++ ++  LC   K+D A  L E M    V P+ F Y  L+D FC  G + +A + 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M   GC  NV +Y+ LI+ Y K +++  A  L+  MLS+G  P+VV Y  L  G  +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 248 IHQVERAFKLFDEMQRHGVAADT----------------WAYRTFIDGLCKNGYIVEAVE 291
             Q+E+A +++  M+ +    D                 + Y   +DGLCK   + EA +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   + +   E +   Y+ LIDG CK G+L  A  +F  +       +V TY+ +I  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 352 ADGKMDKA 359
            D ++D A
Sbjct: 718 KDKRLDLA 725



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 101/442 (22%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           +T    ++ LC+ G    AL L E+      EF    K +TV YT +I GLC+    ++A
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIEKE-----EF----KLDTVIYTQMISGLCEASLFEEA 318

Query: 80  KELFLKMKDENINPNVVTY-----------------------------------NSLIHG 104
            +   +M+  +  PNVVTY                                   NSLIH 
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN--------------------- 143
           +C + D++ A  L  +M D G QP  V +N+++  +C N                     
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 144 --------------------GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
                               GK ++A  ++  M+  G  P+   Y+ ++   C   +V+ 
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  LF  M+S     +VF+Y+ILI+ +CK   ++ A   + EM+  G  P+VV Y  L  
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR------ 297
              +  ++  A +LF+ M   G   +   Y   IDG CK+G I +A +++  +R      
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618

Query: 298 --ILKYELD--------IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
              + +++D        I  Y  L+DGLCK+ ++K A +L   +       + + Y+ +I
Sbjct: 619 DVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALI 678

Query: 348 HALCADGKMDKARDLFLDMEAK 369
              C  GK+D+A+ +F  M  +
Sbjct: 679 DGFCKVGKLDEAQMVFTKMSER 700



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 170/419 (40%), Gaps = 79/419 (18%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N LI   CR G   VAL   EE+     + G   KP+ +TY  ++    +   +D A  +
Sbjct: 201 NVLIRKCCRNGLWNVAL---EELGRLK-DLGY--KPSRLTYNALVRVFLEADRLDTAYLV 254

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEA-------------------------KCL 117
             +M D   N +  T    +H  C A  W EA                           L
Sbjct: 255 HREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 118 FIEMMD-------QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
           F E MD           PNVV++ +++    +  ++    R+L +MI  G  P+  ++N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI-------------- 216
           L+  +C +G  + A +L   M   GC+     Y+ILI G C N+++              
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 217 ---------------------------EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
                                      E A S+  EM+SKG  PD   Y+ +   L    
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V+ AF LF+EM+ + V  D + Y   ID  CK G + +A + F  +       ++  Y 
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            LI    K+ ++  A ELF  +     I +VVTY  +I   C  G+++KA  ++  M  
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 15/230 (6%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            NV++ + C+NG  + A   L  +  +G +P+   YN L+  F    R++ A  +   M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   + ++    ++  CK      AL+L  +   +  K D VIY  +  GL E    E
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL------DIR 306
            A      M+      +   YR  + G  +        +L R  RIL   +        R
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKR------QLGRCKRILSMMITEGCYPSRR 370

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +N LI   C+SG    A++L + +         V YNI+I  +C + K+
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 15/196 (7%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV------SMESMGCKHNVFSYSILINGYC 211
           QIG      VY+ L++     G  +R  E F+        E +G   NV     LI   C
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGN-DRVPEQFLREIRDEDKEILGKLLNV-----LIRKCC 208

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +N     AL     +   G KP  + YN L     E  +++ A+ +  EM   G   D +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
               F+  LCK G   EA+ L       +++LD   Y  +I GLC++   + A +    +
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 332 PRGVLIADVVTYNIMI 347
                I +VVTY I++
Sbjct: 326 RSSSCIPNVVTYRILL 341



 Score = 45.4 bits (106), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  Y  LI+  C+ G   +AL L +EM++           +   Y+++I+ L     V
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTS----YSAADKDLYSSLIESLSLASKV 932

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           DKA EL+  M      P +  +  L+ G    N W EA
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEA 970


>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
          Length = 559

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/345 (32%), Positives = 189/345 (54%), Gaps = 6/345 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A + ++   G  P+V  +N L++ LC+      A  LF E+    G+ G+  +P  V+
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEI----GKRGL--RPTVVS 262

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+I+G CK G +D+   L   M +  + P+V TY+ LI+G C     ++A  LF+EM 
Sbjct: 263 FNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMC 322

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ PN V+F  ++N  C  G+ D    + + M++ GV+P+   YNTL++G C  G + 
Sbjct: 323 DRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLR 382

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++L + M   G K + F+Y++LI+G CK  ++E AL +  EM+ +GI+ D V +  L 
Sbjct: 383 EAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALI 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     QV  A +   EM   G+  D   Y   I G CK G +    +L + ++   + 
Sbjct: 443 SGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHV 502

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
             +  YN L++GLCK G++K A  L  ++    ++ D +TYNI++
Sbjct: 503 PGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 188/367 (51%), Gaps = 7/367 (1%)

Query: 2   EAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            A+++F   L   G   +   ++ L+N    +G+   A+  F  +   N +       ++
Sbjct: 137 SASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPF----HS 192

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  + D L K      A   + ++ D    P+V  +N L+H  C  +  NEA+ LF E
Sbjct: 193 CGY--LFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGE 250

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G++P VVSFN ++N  CK+G +D+  RL   M++  V P+ F Y+ L++G C  G+
Sbjct: 251 IGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQ 310

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A +LF+ M   G   N  +++ LING+C     +  + +Y +ML KG+KPDV+ YNT
Sbjct: 311 LDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNT 370

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL ++  +  A KL  EM + G+  D + Y   IDG CK G +  A+E+ + +    
Sbjct: 371 LINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEG 430

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            ELD  A+  LI G C+ G++  A    R +    +  D  TY ++IH  C  G +    
Sbjct: 431 IELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGF 490

Query: 361 DLFLDME 367
            L  +M+
Sbjct: 491 KLLKEMQ 497



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 173/308 (56%), Gaps = 1/308 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+   +  ++  LCKE  +++A+ LF ++    + P VV++N+LI+G+C + + ++   L
Sbjct: 223 PDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRL 282

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              MM+  V P+V +++V++N LCK G++D+A++L   M   G+ PN   + TL++G C+
Sbjct: 283 KRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCV 342

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           TGR +   E++  M   G K +V +Y+ LING CK  ++  A  L  EM  +G+KPD   
Sbjct: 343 TGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFT 402

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G  +   +E A ++  EM + G+  D  A+   I G C+ G ++EA    R + 
Sbjct: 403 YTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREML 462

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D   Y  +I G CK G +K  ++L + +     +  VVTYN++++ LC  G+M 
Sbjct: 463 EAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMK 522

Query: 358 KARDLFLD 365
            A ++ LD
Sbjct: 523 NA-NMLLD 529



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 172/325 (52%), Gaps = 12/325 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P V ++NTLING C++G+      L   M   N  F     P+  
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMME-NRVF-----PDVF 296

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+GLCKEG +D A +LFL+M D  + PN VT+ +LI+G C     +    ++ +M
Sbjct: 297 TYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQM 356

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV+P+V+++N ++N LCK G + EA +L+  M Q G++P+ F Y  L+DG C  G +
Sbjct: 357 LRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDL 416

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+   M   G + +  +++ LI+G+C+  ++  A     EML  GIKPD   Y  +
Sbjct: 417 ESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMV 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V+  FKL  EMQ  G       Y   ++GLCK G +  A  L   +  L  
Sbjct: 477 IHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGV 536

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   YN L++      R   AW+
Sbjct: 537 VPDDITYNILLE------RTLQAWK 555



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 132/297 (44%), Gaps = 29/297 (9%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N+NP+ ++  SL+  F     W   +  F        + ++ S+  + + LC +  + EA
Sbjct: 75  NLNPHSLSPPSLLSFF----KWLSTQHHF--------RLSIHSYCTMTHFLCTHKMLSEA 122

Query: 150 SRLLELMIQI-----------------GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
             LL+ ++                   G   +  V++ LM+ +  +G  + A + F  + 
Sbjct: 123 QSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVR 182

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
               +    S   L +   K      A + Y E+L  G  PDV  +N L   L + H++ 
Sbjct: 183 KHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKIN 242

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  LF E+ + G+     ++ T I+G CK+G + +   L R +   +   D+  Y+ LI
Sbjct: 243 EAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLI 302

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +GLCK G+L  A +LF  +    L+ + VT+  +I+  C  G+ D   +++  M  K
Sbjct: 303 NGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRK 359



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA     ++   G +P+  TY  +I+G C+ G       L +EM   +G       P  
Sbjct: 452 IEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEM-QCDGHV-----PGV 505

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 102
           VTY  +++GLCK+G +  A  L   M +  + P+ +TYN L+
Sbjct: 506 VTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILL 547


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  200 bits (509), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 186/364 (51%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++++ G +PN +TYN +I  LC+TG    A  +  EM +     G+   P+ V YTT
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISE----GIA--PDGVIYTT 263

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK G V  A  LF +M+   I+P+ +TY ++I G C      EA  LF EM+ + 
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++P+ V++  +++  CK GKM EA  L   M+Q+G+ PN   Y  L DG C  G V+ A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           EL   M   G + N+++Y+ L+NG CK   I+ A+ L  +M   G  PD V Y TL    
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  ++ RA +L  +M    +      +   ++G C +G + +  +L + +       + 
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN LI   C    ++   E++R +    ++ D  TYNI+I   C    M +A  L  D
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 366 MEAK 369
           M  K
Sbjct: 564 MVGK 567



 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G  P+   Y TLI+G C+ G+   A  LF+EM            P+ +
Sbjct: 241 EAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRK------ISPDFI 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I GLC+ G V +A +LF +M  + + P+ VTY +LI G+C      EA  L  +M
Sbjct: 295 TYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN+V++  + + LCK G++D A+ LL  M + G+  N + YN+L++G C  G +
Sbjct: 355 LQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNI 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A +L   ME  G   +  +Y+ L++ YCK++E+  A  L  +ML + ++P VV +N L
Sbjct: 415 DQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVL 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      +E   KL   M   G+  +   Y + I   C    +    E++R +     
Sbjct: 475 MNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGV 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN LI G CK+  +K AW L R +        V +YN +I       K  +AR+
Sbjct: 535 VPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARE 594

Query: 362 LFLDM 366
           LF  M
Sbjct: 595 LFEQM 599



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/358 (34%), Positives = 183/358 (51%), Gaps = 12/358 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---PN 59
           A  LF +++     P+  TY  +I GLC+TG  + A  LF EM         VCK   P+
Sbjct: 277 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEM---------VCKRLEPD 327

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTYT +IDG CKEG + +A  L  +M    + PN+VTY +L  G C   + + A  L  
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G++ N+ ++N ++N LCK G +D+A +L++ M   G  P+A  Y TLMD +C + 
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            + RA EL   M     +  V ++++L+NG+C +  +E    L   ML KGI P+   YN
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L       + +    +++  M   GV  D   Y   I G CK   + EA  L R +   
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK 567

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            + L + +YN LI G  K  +   A ELF  + R  L+AD   YNI       +GKM+
Sbjct: 568 GFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKME 625



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/344 (32%), Positives = 168/344 (48%), Gaps = 6/344 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  LF ++     EP+  TY  LI+G C+ G    A +L  +M     + G+   PN 
Sbjct: 310 MEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML----QMGLT--PNI 363

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT + DGLCK G VD A EL  +M  + +  N+ TYNSL++G C A + ++A  L  +
Sbjct: 364 VTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKD 423

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ V++  +M+  CK+ +M  A  LL  M+   ++P    +N LM+GFC++G 
Sbjct: 424 MEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGM 483

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +   E+L   M   G   N  +Y+ LI  YC    +     +Y  M +KG+ PD   YN 
Sbjct: 484 LEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNI 543

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   ++ A+ L  +M   G      +Y   I G  K    +EA ELF  +R   
Sbjct: 544 LIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREG 603

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              D   YN   D     G++++  EL        L+ D+ T N
Sbjct: 604 LVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKN 647



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 155/283 (54%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L  +M+ + + PN  TYN +I   C      EA+ +  EM+ +G+ P+ V +  +++  
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G +  A RL + M +  + P+   Y  ++ G C TGRV  A++LF  M     + + 
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ LI+GYCK  +++ A SL+++ML  G+ P++V Y  L  GL +  +V+ A +L  E
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M R G+  + + Y + ++GLCK G I +AV+L + + +  +  D   Y  L+D  CKS  
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +  A EL R +    L   VVT+N++++  C  G ++    L 
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 491



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 133/261 (50%), Gaps = 7/261 (2%)

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNG-------KMDEASRLLELMIQIGVRPNAF 166
           A+ LF +M++ G+  +V S N+ ++ L ++        K +   +L+E M   G++PN +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            YN ++   C TG+V  AE +   M S G   +   Y+ LI+G+CK   +  A  L+ EM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             + I PD + Y  +  GL +  +V  A KLF EM    +  D   Y   IDG CK G +
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA  L   +  +    +I  Y  L DGLCK G +  A EL   + R  L  ++ TYN +
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 347 IHALCADGKMDKARDLFLDME 367
           ++ LC  G +D+A  L  DME
Sbjct: 405 VNGLCKAGNIDQAVKLMKDME 425



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/239 (27%), Positives = 109/239 (45%), Gaps = 6/239 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   + V G  P+  TY TL++  C++   + A  L  +M +         +P  V
Sbjct: 416 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE------LQPTVV 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++G C  G ++  ++L   M ++ I PN  TYNSLI  +C  N+      ++  M
Sbjct: 470 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 529

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+  ++N+++   CK   M EA  L   M+  G       YN L+ GF    + 
Sbjct: 530 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 589

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             A ELF  M   G   +   Y+I  +      ++E  L L  E + K +  D+   NT
Sbjct: 590 LEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score = 39.7 bits (91), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 7/126 (5%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE-------AVELFRTLRILKYEL 303
           V  A KLFD+M  +G+     +   FI  L ++   ++        ++L   ++I   + 
Sbjct: 162 VSFARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKP 221

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +   YN +I  LCK+G++  A  + R +    +  D V Y  +I   C  G +  A  LF
Sbjct: 222 NPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLF 281

Query: 364 LDMEAK 369
            +M+ +
Sbjct: 282 DEMQKR 287


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  200 bits (509), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 194/378 (51%), Gaps = 16/378 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF--------- 52
            A  LF  +   GC PNV TY  LI+G C++G    A  ++  M  GN +          
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM-RGNADIPDVDMYFKI 626

Query: 53  --GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
             G +  PN  TY  ++DGLCK   V +A++L   M  E   PN + Y++LI GFC    
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            +EA+ +F +M ++G  PNV +++ +++ L K+ ++D A ++L  M++    PN  +Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++DG C  G+ + A  L   ME  GC  NV +Y+ +I+G+ K  +++  L L  +M +KG
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             P+ V Y  L         ++ A +L DEM++         YR  I+G  +  +I+   
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE-FIISLG 865

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIH 348
            L      +   + I AY  LID  CK+GRL++A EL + +        AD   Y+ +I 
Sbjct: 866 LLDEIAENVAVPI-IPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIE 924

Query: 349 ALCADGKMDKARDLFLDM 366
           +L    K+DKA +L+ DM
Sbjct: 925 SLSLASKVDKAFELYADM 942



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 195/382 (51%), Gaps = 22/382 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++  ++   G  P+  TY+ +I  LC       A  LFEEM + +    VV  P+  
Sbjct: 463 KAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH----VV--PDVF 516

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +ID  CK G + +A++ F +M  +   PNVVTY +LIH +  A   + A  LF  M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM--------------IQIG-VR-PNA 165
           + +G  PNVV++  +++  CK+G++++A ++   M              I  G +R PN 
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           F Y  L+DG C   +V  A +L   M   GC+ N   Y  LI+G+CK  +++ A  ++++
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M  +G  P+V  Y++L   LF+  +++ A K+   M  +  A +   Y   IDGLCK G 
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
             EA  L   +       ++  Y  +IDG  K+G++    EL R +       + VTY +
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 346 MIHALCADGKMDKARDLFLDME 367
           +I+  CA G +D A  L  +M+
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMK 838



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 178/384 (46%), Gaps = 18/384 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTV 61
           A  L  K+   GC+P    YN LI G+C     + +L++ E      GE        N V
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             + +   LC  G  +KA  +  +M  +   P+  TY+ +I   C A+  + A  LF EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+V ++ ++++  CK G + +A +  + M++ G  PN   Y  L+  +    ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV------ 235
           + A ELF  M S GC  NV +Y+ LI+G+CK+ +IE A  +Y+ M      PDV      
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 236 ----------VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                       Y  L  GL + H+V+ A  L D M   G   +   Y   IDG CK G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA  +F  +    Y  ++  Y+ LID L K  RL +A ++   +       +V+ Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           MI  LC  GK D+A  L   ME K
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEK 770



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 180/368 (48%), Gaps = 28/368 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+   +N+LI+  CR+G    A  L ++M    G+ G  C+P  V Y  +I G+C  
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--CQPGYVVYNILIGGICGN 417

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   ++ A++ + +M D ++  N V  ++L    C A  + +A  +  EMM +G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +++ ++  LC   K+D A  L E M    V P+ F Y  L+D FC  G + +A + 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M   GC  NV +Y+ LI+ Y K +++  A  L+  MLS+G  P+VV Y  L  G  +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 248 IHQVERAFKLFDEMQRHGVAADT----------------WAYRTFIDGLCKNGYIVEAVE 291
             Q+E+A +++  M+ +    D                 + Y   +DGLCK   + EA +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   + +   E +   Y+ LIDG CK G+L  A  +F  +       +V TY+ +I  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 352 ADGKMDKA 359
            D ++D A
Sbjct: 718 KDKRLDLA 725



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 101/442 (22%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           +T    ++ LC+ G    AL L E+      EF    K +TV YT +I GLC+    ++A
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIEK-----EEF----KLDTVIYTQMISGLCEASLFEEA 318

Query: 80  KELFLKMKDENINPNVVTY-----------------------------------NSLIHG 104
            +   +M+  +  PNVVTY                                   NSLIH 
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN--------------------- 143
           +C + D++ A  L  +M D G QP  V +N+++  +C N                     
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 144 --------------------GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
                               GK ++A  ++  M+  G  P+   Y+ ++   C   +V+ 
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  LF  M+S     +VF+Y+ILI+ +CK   ++ A   + EM+  G  P+VV Y  L  
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR------ 297
              +  ++  A +LF+ M   G   +   Y   IDG CK+G I +A +++  +R      
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618

Query: 298 --ILKYELD--------IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
              + +++D        I  Y  L+DGLCK+ ++K A +L   +       + + Y+ +I
Sbjct: 619 DVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALI 678

Query: 348 HALCADGKMDKARDLFLDMEAK 369
              C  GK+D+A+ +F  M  +
Sbjct: 679 DGFCKVGKLDEAQMVFTKMSER 700



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 170/419 (40%), Gaps = 79/419 (18%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N LI   CR G   VAL   EE+     + G   KP+ +TY  ++    +   +D A  +
Sbjct: 201 NVLIRKCCRNGLWNVAL---EELGRLK-DLGY--KPSRLTYNALVRVFLEADRLDTAYLV 254

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEA-------------------------KCL 117
             +M D   N +  T    +H  C A  W EA                           L
Sbjct: 255 HREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 118 FIEMMD-------QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
           F E MD           PNVV++ +++    +  ++    R+L +MI  G  P+  ++N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI-------------- 216
           L+  +C +G  + A +L   M   GC+     Y+ILI G C N+++              
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 217 ---------------------------EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
                                      E A S+  EM+SKG  PD   Y+ +   L    
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V+ AF LF+EM+ + V  D + Y   ID  CK G + +A + F  +       ++  Y 
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            LI    K+ ++  A ELF  +     I +VVTY  +I   C  G+++KA  ++  M  
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 15/230 (6%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            NV++ + C+NG  + A   L  +  +G +P+   YN L+  F    R++ A  +   M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   + ++    ++  CK      AL+L  +   +  K D VIY  +  GL E    E
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL------DIR 306
            A      M+      +   YR  + G  +        +L R  RIL   +        R
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKR------QLGRCKRILSMMITEGCYPSRR 370

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +N LI   C+SG    A++L + +         V YNI+I  +C + K+
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 15/196 (7%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV------SMESMGCKHNVFSYSILINGYC 211
           QIG      VY+ L++     G  +R  E F+        E +G   NV     LI   C
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGN-DRVPEQFLREIRDEDKEILGKLLNV-----LIRKCC 208

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +N     AL     +   G KP  + YN L     E  +++ A+ +  EM   G   D +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
               F+  LCK G   EA+ L       +++LD   Y  +I GLC++   + A +    +
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 332 PRGVLIADVVTYNIMI 347
                I +VVTY I++
Sbjct: 326 RSSSCIPNVVTYRILL 341



 Score = 45.4 bits (106), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 4/98 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P +  Y  LI+  C+ G   +AL L +EM++           +   Y+++I+ L     V
Sbjct: 877 PIIPAYRILIDSFCKAGRLELALELHKEMSSCTS----YSAADKDLYSSLIESLSLASKV 932

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           DKA EL+  M      P +  +  L+ G    N W EA
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIRINRWEEA 970


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 196/396 (49%), Gaps = 46/396 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +V TY TLI+GLC++G    A  L ++MA+        C PN VTYT +IDGLCK 
Sbjct: 5   GYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG------CAPNVVTYTALIDGLCKA 58

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                A +   +M      P++VTYNSLIHG C AN  ++A  +  E++  G  PN +++
Sbjct: 59  RRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITY 118

Query: 134 NVIMNELCKNGKMDEASRLL-------------------------------------ELM 156
           + ++   C+  ++D+A  L+                                     + M
Sbjct: 119 STLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEM 178

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           I+ G  P+   YNT + G C  G++++  E+   M+  G   +V ++  +I+G CK   I
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ--RHGVAADTWAYR 274
           + A  ++  ML +G  PD + Y+ +   L   ++++   ++ + MQ  + G   + + + 
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPR 333
            FI  LC++G    A  +   +       ++ +YN +IDGLCKSG +  AW+L R  L  
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G    DV+ +N +I   C  G++ +A  L ++M+AK
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAK 394



 Score =  171 bits (434), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 194/430 (45%), Gaps = 83/430 (19%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNT I+GLC+ G     L + EEM  G    G+   P+ VT+ +II GLCK   +
Sbjct: 185 PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG----GI--PPDVVTFCSIISGLCKANRI 238

Query: 77  DKAKELFLKMKDENINPNVVTY-------------------------------------N 99
           D A ++F  M +    P+ +TY                                     N
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           + I   C +  +  AK + + M++ G  PN++S+N +++ LCK+G +D+A +L   M+  
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358

Query: 160 GV-RPNAFVYNTLMDGFCLTGRVNRAEELFVSM--------------------------- 191
           G  +P+   +NTL+ GFC  GR+++A +L + M                           
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLK 418

Query: 192 ---------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
                    +++GCK NV +Y+ LINGY K+   E A SL+ EM +KG  PD++ YNT+ 
Sbjct: 419 QAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVL 478

Query: 243 IGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               +   + +A  ++ +++      + D   YR  IDG C+     + + L + +    
Sbjct: 479 SAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARG 538

Query: 301 YELDIRAYNCLIDGLCKSGRLKI-AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +  D   YN LI  L ++  +   A  +++ +     +     +N ++      G ++ A
Sbjct: 539 WSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSA 598

Query: 360 RDLFLDMEAK 369
           R +  +M  K
Sbjct: 599 RSMVQEMNEK 608



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 192/407 (47%), Gaps = 43/407 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---- 57
           +A  +  +L   G  PN  TY+TL+   CR      A  L  EM       G VC     
Sbjct: 98  DAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMI----LRGSVCNLVVY 153

Query: 58  -------------------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
                                          P+ VTY T I GLCK G +DK  E+  +M
Sbjct: 154 IDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 213

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
               I P+VVT+ S+I G C AN  ++A  +F  M+++G  P+ ++++++++ L +  ++
Sbjct: 214 DRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 273

Query: 147 DEASRLLELM--IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           D    +LE M  ++ G     + +N  +   C +G+   A+ + + M   G   N+ SY+
Sbjct: 274 DTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYN 333

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
            +I+G CK+  ++ A  L  +ML  G  KPDV+ +NTL  G  +  ++ +A +L  EM+ 
Sbjct: 334 FVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKA 393

Query: 264 HGV-AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             +   D   Y T IDG  K G + +A  L + ++ +  + ++  Y  LI+G  K G  +
Sbjct: 394 KNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYE 453

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  LF  +       D++TYN ++ A    G M KA  ++  ++ K
Sbjct: 454 EAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNK 500



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 145/285 (50%), Gaps = 2/285 (0%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M     + +VVTY +LI G C + D + A+ L  +M D G  PNVV++  +++ LCK  +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             +A + ++ M++ G  P+   YN+L+ G C+  R++ A  +   +   G   N  +YS 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF--DEMQR 263
           L+   C+ + ++ A  L  EM+ +G   ++V+Y     G  E       ++    DEM  
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G   D   Y TFI GLCK G + + +E+   +       D+  +  +I GLCK+ R+  
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           A+++F+ +     + D +TY+IM+  L    ++D   ++   M+A
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQA 285



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 44/296 (14%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+ +YN +I+GLC++G+   A  L  +M +        CKP+ + + T+I G CK 
Sbjct: 324 GSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG-----CCKPDVIFFNTLISGFCKA 378

Query: 74  GFVDKAKELFLKMKDENIN-PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G + +A +L ++MK +NI  P+VVTYN+LI G        +AK L  EM   G +PNVV+
Sbjct: 379 GRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVT 438

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++N   K+G  +EA  L + M   G  P+   YNT++  F   G +++AE ++  ++
Sbjct: 439 YAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLK 498

Query: 193 SMG--CKHNVFSYSILINGYCKNKEIEG-------------------------------- 218
           +    C  +  +Y ILI+GYC+ ++ E                                 
Sbjct: 499 NKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAKLAETEE 558

Query: 219 ----ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
               AL++Y +ML +   P   I+N+L         V  A  +  EM   G   D 
Sbjct: 559 VPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDA 614


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 121/378 (32%), Positives = 194/378 (51%), Gaps = 16/378 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF--------- 52
            A  LF  +   GC PNV TY  LI+G C++G    A  ++  M  GN +          
Sbjct: 568 SANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM-RGNADIPDVDMYFKI 626

Query: 53  --GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
             G +  PN  TY  ++DGLCK   V +A++L   M  E   PN + Y++LI GFC    
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            +EA+ +F +M ++G  PNV +++ +++ L K+ ++D A ++L  M++    PN  +Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++DG C  G+ + A  L   ME  GC  NV +Y+ +I+G+ K  +++  L L  +M +KG
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKG 806

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             P+ V Y  L         ++ A +L DEM++         YR  I+G  +  +I+   
Sbjct: 807 CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE-FIISLG 865

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIH 348
            L      +   + I AY  LID  CK+GRL++A EL + +        AD   Y+ +I 
Sbjct: 866 LLDEIAENVAVPI-IPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIE 924

Query: 349 ALCADGKMDKARDLFLDM 366
           +L    K+DKA +L+ DM
Sbjct: 925 SLSLASKVDKAFELYADM 942



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 195/382 (51%), Gaps = 22/382 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++  ++   G  P+  TY+ +I  LC       A  LFEEM + +    VV  P+  
Sbjct: 463 KAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNH----VV--PDVF 516

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +ID  CK G + +A++ F +M  +   PNVVTY +LIH +  A   + A  LF  M
Sbjct: 517 TYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMM 576

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM--------------IQIG-VR-PNA 165
           + +G  PNVV++  +++  CK+G++++A ++   M              I  G +R PN 
Sbjct: 577 LSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNI 636

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           F Y  L+DG C   +V  A +L   M   GC+ N   Y  LI+G+CK  +++ A  ++++
Sbjct: 637 FTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTK 696

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M  +G  P+V  Y++L   LF+  +++ A K+   M  +  A +   Y   IDGLCK G 
Sbjct: 697 MSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGK 756

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
             EA  L   +       ++  Y  +IDG  K+G++    EL R +       + VTY +
Sbjct: 757 TDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRV 816

Query: 346 MIHALCADGKMDKARDLFLDME 367
           +I+  CA G +D A  L  +M+
Sbjct: 817 LINHCCAAGLLDDAHQLLDEMK 838



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 178/384 (46%), Gaps = 18/384 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTV 61
           A  L  K+   GC+P    YN LI G+C     + +L++ E      GE        N V
Sbjct: 388 AYKLLKKMGDCGCQPGYVVYNILIGGIC-GNEKLPSLDVLELAEKAYGEMLDAHVVLNKV 446

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             + +   LC  G  +KA  +  +M  +   P+  TY+ +I   C A+  + A  LF EM
Sbjct: 447 NVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEM 506

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P+V ++ ++++  CK G + +A +  + M++ G  PN   Y  L+  +    ++
Sbjct: 507 KSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKM 566

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV------ 235
           + A ELF  M S GC  NV +Y+ LI+G+CK+ +IE A  +Y+ M      PDV      
Sbjct: 567 SSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI 626

Query: 236 ----------VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
                       Y  L  GL + H+V+ A  L D M   G   +   Y   IDG CK G 
Sbjct: 627 DDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGK 686

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + EA  +F  +    Y  ++  Y+ LID L K  RL +A ++   +       +V+ Y  
Sbjct: 687 LDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTE 746

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           MI  LC  GK D+A  L   ME K
Sbjct: 747 MIDGLCKVGKTDEAYRLMSMMEEK 770



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 180/368 (48%), Gaps = 28/368 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+   +N+LI+  CR+G    A  L ++M    G+ G  C+P  V Y  +I G+C  
Sbjct: 364 GCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM----GDCG--CQPGYVVYNILIGGICGN 417

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   ++ A++ + +M D ++  N V  ++L    C A  + +A  +  EMM +G  
Sbjct: 418 EKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFI 477

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +++ ++  LC   K+D A  L E M    V P+ F Y  L+D FC  G + +A + 
Sbjct: 478 PDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKW 537

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M   GC  NV +Y+ LI+ Y K +++  A  L+  MLS+G  P+VV Y  L  G  +
Sbjct: 538 FDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCK 597

Query: 248 IHQVERAFKLFDEMQRHGVAADT----------------WAYRTFIDGLCKNGYIVEAVE 291
             Q+E+A +++  M+ +    D                 + Y   +DGLCK   + EA +
Sbjct: 598 SGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARD 657

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   + +   E +   Y+ LIDG CK G+L  A  +F  +       +V TY+ +I  L 
Sbjct: 658 LLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLF 717

Query: 352 ADGKMDKA 359
            D ++D A
Sbjct: 718 KDKRLDLA 725



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 189/442 (42%), Gaps = 101/442 (22%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           +T    ++ LC+ G    AL L E+      EF    K +TV YT +I GLC+    ++A
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIEKE-----EF----KLDTVIYTQMISGLCEASLFEEA 318

Query: 80  KELFLKMKDENINPNVVTY-----------------------------------NSLIHG 104
            +   +M+  +  PNVVTY                                   NSLIH 
Sbjct: 319 MDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHA 378

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN--------------------- 143
           +C + D++ A  L  +M D G QP  V +N+++  +C N                     
Sbjct: 379 YCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLD 438

Query: 144 --------------------GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
                               GK ++A  ++  M+  G  P+   Y+ ++   C   +V+ 
Sbjct: 439 AHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDN 498

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  LF  M+S     +VF+Y+ILI+ +CK   ++ A   + EM+  G  P+VV Y  L  
Sbjct: 499 AFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIH 558

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR------ 297
              +  ++  A +LF+ M   G   +   Y   IDG CK+G I +A +++  +R      
Sbjct: 559 AYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIP 618

Query: 298 --ILKYELD--------IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
              + +++D        I  Y  L+DGLCK+ ++K A +L   +       + + Y+ +I
Sbjct: 619 DVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALI 678

Query: 348 HALCADGKMDKARDLFLDMEAK 369
              C  GK+D+A+ +F  M  +
Sbjct: 679 DGFCKVGKLDEAQMVFTKMSER 700



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 170/419 (40%), Gaps = 79/419 (18%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N LI   CR G   VAL   EE+     + G   KP+ +TY  ++    +   +D A  +
Sbjct: 201 NVLIRKCCRNGLWNVAL---EELGRLK-DLGY--KPSRLTYNALVRVFLEADRLDTAYLV 254

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEA-------------------------KCL 117
             +M D   N +  T    +H  C A  W EA                           L
Sbjct: 255 HREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASL 314

Query: 118 FIEMMD-------QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
           F E MD           PNVV++ +++    +  ++    R+L +MI  G  P+  ++N+
Sbjct: 315 FEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNS 374

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI-------------- 216
           L+  +C +G  + A +L   M   GC+     Y+ILI G C N+++              
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 217 ---------------------------EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
                                      E A S+  EM+SKG  PD   Y+ +   L    
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V+ AF LF+EM+ + V  D + Y   ID  CK G + +A + F  +       ++  Y 
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            LI    K+ ++  A ELF  +     I +VVTY  +I   C  G+++KA  ++  M  
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRG 613



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 15/230 (6%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            NV++ + C+NG  + A   L  +  +G +P+   YN L+  F    R++ A  +   M 
Sbjct: 200 LNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMS 259

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   + ++    ++  CK      AL+L  +   +  K D VIY  +  GL E    E
Sbjct: 260 DSGFNMDGYTLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFE 316

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL------DIR 306
            A      M+      +   YR  + G  +        +L R  RIL   +        R
Sbjct: 317 EAMDFLSRMRSSSCIPNVVTYRILLCGCLRKR------QLGRCKRILSMMITEGCYPSRR 370

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +N LI   C+SG    A++L + +         V YNI+I  +C + K+
Sbjct: 371 IFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 15/196 (7%)

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV------SMESMGCKHNVFSYSILINGYC 211
           QIG      VY+ L++     G  +R  E F+        E +G   NV     LI   C
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGN-DRVPEQFLREIRDEDKEILGKLLNV-----LIRKCC 208

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +N     AL     +   G KP  + YN L     E  +++ A+ +  EM   G   D +
Sbjct: 209 RNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGY 268

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
               F+  LCK G   EA+ L       +++LD   Y  +I GLC++   + A +    +
Sbjct: 269 TLGCFVHLLCKAGRWREALALIEK---EEFKLDTVIYTQMISGLCEASLFEEAMDFLSRM 325

Query: 332 PRGVLIADVVTYNIMI 347
                I +VVTY I++
Sbjct: 326 RSSSCIPNVVTYRILL 341


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  200 bits (508), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 176/334 (52%), Gaps = 6/334 (1%)

Query: 30  CRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
           C+      A+ L +EM +        C P+ VTY  +++G+C+EG VD A E    +   
Sbjct: 3   CKRSGYKQAMKLLDEMRDKG------CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSY 56

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
              PN V+YN ++ G C A  W +A+ L  EM  +G  PNVV+FN++++ LC+ G ++ A
Sbjct: 57  GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPA 116

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             +LE + + G  PN+  YN L+  FC   ++++A      M S GC  ++ SY+ L+  
Sbjct: 117 LEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTA 176

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C++ E++ A+ L  ++  KG  P ++ YNT+  GL +  + + A +L +EM   G+  D
Sbjct: 177 LCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPD 236

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y T   GLC+   I +A+  F  ++ +    +   YN +I GLCK      A +LF 
Sbjct: 237 IITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFA 296

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +     + +  TY I+I  L  +G + +ARDL 
Sbjct: 297 YMIGNGCMPNESTYTILIEGLAYEGLIKEARDLL 330



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/336 (33%), Positives = 182/336 (54%), Gaps = 7/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  GC P++ TYN ++NG+C+ G    A+   + + +    +G  C+PNTV
Sbjct: 10  QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPS----YG--CEPNTV 63

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++ GLC     + A+EL  +M  +   PNVVT+N LI   C       A  +  ++
Sbjct: 64  SYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQI 123

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN +S+N +++  CK  KMD+A   L+LM+  G  P+   YNTL+   C +G V
Sbjct: 124 PKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEV 183

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   ++  GC   + SY+ +I+G  K  + + AL L +EM+SKG++PD++ Y+T+
Sbjct: 184 DVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTI 243

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++E A + F ++Q  G+  +T  Y   I GLCK      A++LF  +     
Sbjct: 244 AAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGC 303

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             +   Y  LI+GL   G +K A +L   L  RGV+
Sbjct: 304 MPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVV 339



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 152/296 (51%)

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           CK     +A +L  +M+D+   P++VTYN +++G C     ++A      +   G +PN 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           VS+N+++  LC   + ++A  L+  M Q G  PN   +N L+   C  G V  A E+   
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           +   GC  N  SY+ L++ +CK K+++ A++    M+S+G  PD+V YNTL   L    +
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A +L  +++  G A    +Y T IDGL K G   EA+EL   +     + DI  Y+ 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  GLC+  R++ A   F  +    +  + V YN +I  LC   +   A DLF  M
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 298



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%)

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK     +A +LL+ M   G  P+   YN +++G C  GRV+ A E   ++ S GC+ N 
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            SY+I++ G C  +  E A  L  EM  KG  P+VV +N L   L     VE A ++ ++
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           + ++G   ++ +Y   +   CK   + +A+     +       DI +YN L+  LC+SG 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +A EL   L        +++YN +I  L   GK  +A +L  +M +K
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSK 231


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 110/336 (32%), Positives = 179/336 (53%), Gaps = 11/336 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P    YN  ++ LC++G    A+ + + M +G       CKP+ VT+ T+I GLCK 
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG------ACKPDVVTFNTLIAGLCKA 102

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A+++  +M+      N+VTYN+LI+G   A    EA    + M      P+  ++
Sbjct: 103 GRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA---VLVMQGMTTTPDTQTY 159

Query: 134 NVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM- 191
           N I++  CK+G++D A   LE M Q  G  P+ F Y+ L++G C +  + +A+EL   M 
Sbjct: 160 NAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMI 219

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
               C  +V +++ L++GYCK ++++ A  L S ML  G  PDVV Y+T+  GL     V
Sbjct: 220 GRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDV 279

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           ++ F L ++M   G   D   Y   + GLCK G +VEA  L + +       +   Y+ +
Sbjct: 280 DKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLV 339

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            DGLCK  +L +A +L  S+     + DVV +  ++
Sbjct: 340 FDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375



 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/352 (33%), Positives = 174/352 (49%), Gaps = 10/352 (2%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           +TY  L+   C  G    A++L  EM    G       P    Y   +  LCK G V +A
Sbjct: 19  YTYFVLVRAHCLAGELQAAMDLLREMEQQPGM-----APTPSMYNFFVHALCKSGKVPEA 73

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            E+   MKD    P+VVT+N+LI G C A   +EA+ +  EM   G   N+V++N ++N 
Sbjct: 74  MEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLING 133

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKH 198
           L   G+  EA  +++ M      P+   YN ++ GFC +G ++RA      M +  GC  
Sbjct: 134 LSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSP 190

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
           + F+YSILING CK+  +  A  L  EM+  K     VV +NTL  G  +   ++RA +L
Sbjct: 191 DTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRAREL 250

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
              M  HG A D   Y T IDGLC+ G + +   L   +     + D+  Y  L+ GLCK
Sbjct: 251 LSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCK 310

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +G++  A  L + +       + VTY+++   LC   K+D A DL   +  K
Sbjct: 311 AGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDK 362



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 167/314 (53%), Gaps = 13/314 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   ++   C+P+V T+NTLI GLC+ G    A  + +EM      F      N V
Sbjct: 72  EAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG--FAA----NLV 125

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GL   G   ++ E  L M+     P+  TYN++IHGFC + + + A   F+E 
Sbjct: 126 TYNTLINGLSSAG---RSGEAVLVMQGMTTTPDTQTYNAIIHGFCKSGEIDRAYG-FLEE 181

Query: 122 MDQ--GVQPNVVSFNVIMNELCKNGKMDEASRLLELMI-QIGVRPNAFVYNTLMDGFCLT 178
           M Q  G  P+  ++++++N LCK+  + +A  LL+ MI +     +   +NTL+DG+C  
Sbjct: 182 MKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKA 241

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
             ++RA EL  SM   GC  +V +YS +I+G C+  +++   +L  +M+S+G KPDVV Y
Sbjct: 242 QDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTY 301

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L  GL +  ++  A +L   M   G   +   Y    DGLCK   +  A +L  ++R 
Sbjct: 302 TVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRD 361

Query: 299 LKYELDIRAYNCLI 312
                D+ A+  L+
Sbjct: 362 KGRVTDVVAFETLL 375



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 128/230 (55%), Gaps = 6/230 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TYN +I+G C++G    A    EEM    G     C P+T TY+ +I+GLCK   +
Sbjct: 154 PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAG-----CSPDTFTYSILINGLCKSSNL 208

Query: 77  DKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            KA EL  +M   ++   +VV +N+L+ G+C A D + A+ L   M++ G  P+VV+++ 
Sbjct: 209 RKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYST 268

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I++ LC+ G +D+   LLE M+  G +P+   Y  L+ G C  G++  A  L   M   G
Sbjct: 269 IIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDG 328

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           C  N  +YS++ +G CK  +++ A  L + +  KG   DVV + TL + +
Sbjct: 329 CTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSV 378


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 193/382 (50%), Gaps = 41/382 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ F+YN +I GL R+G    AL +F+EM     + GVV  PN +TY T+IDG  K G +
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMV----DMGVV--PNWITYNTMIDGHVKGGDL 67

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK--------------------- 115
           +    L  +M  +   PN+VTYN L+ G C A   +E +                     
Sbjct: 68  EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127

Query: 116 --------------CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
                          LF E + +GV     + ++++N LCK+GK+ +A ++LE+++  G+
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 187

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P   +YNTL++G+C    +  A  +F  M+S   + +  +Y+ LING CK + +  A  
Sbjct: 188 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 247

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L  EM   G+ P V  +NTL        Q+E+ F +  +MQ+ G+ +D  ++ + +   C
Sbjct: 248 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 307

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           KNG I EAV +   +       + + YN +ID   +SG  + A+ L   +    + A +V
Sbjct: 308 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 367

Query: 342 TYNIMIHALCADGKMDKARDLF 363
           TYN+++  LC   ++D+A +L 
Sbjct: 368 TYNLLLKGLCRSSQIDEAEELI 389



 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ FTY+ L +GL RTG +   L+LF E        G        T + +++GLCK+G V
Sbjct: 119 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKV 172

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA+++   +    + P  V YN+LI+G+C   D   A C+F +M  + ++P+ +++N +
Sbjct: 173 AKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 232

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LCK   + +A  L+  M + GV P+   +NTL+D +   G++ +   +   M+  G 
Sbjct: 233 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 292

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +V S+  ++  +CKN +I  A+++  +M+ K + P+  +YN++     E    E+AF 
Sbjct: 293 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 352

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L ++M+  GV+A    Y   + GLC++  I EA EL  TLR      D+ +YN +I   C
Sbjct: 353 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 412

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             G    A EL + + +  +   + TY+ ++ AL + G++     L+  M
Sbjct: 413 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 462



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/304 (29%), Positives = 163/304 (53%), Gaps = 6/304 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P    YNTLING C+      A  +FE+M + +       +P+ +TY  +I+GLCK 
Sbjct: 186 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH------IRPDHITYNALINGLCKL 239

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V KA++L ++M+   ++P+V T+N+LI  +  A    +   +  +M  +G++ +V+SF
Sbjct: 240 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 299

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++   CKNGK+ EA  +L+ MI   V PNA VYN+++D +  +G   +A  L   M++
Sbjct: 300 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 359

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ +Y++L+ G C++ +I+ A  L   + ++G++PDVV YNT+          ++
Sbjct: 360 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 419

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L  EM ++G+      Y T +  L   G + +   L++ +     E     Y  ++D
Sbjct: 420 ALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 479

Query: 314 GLCK 317
              +
Sbjct: 480 AYVR 483



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 161/309 (52%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  +Y  +I GL + G    A ++F +M D  + PN +TYN++I G     D      L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+  G +PN+V++NV+++ LC+ G+MDE   L++ M    + P+ F Y+ L DG   
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           TG       LF      G     ++ SIL+NG CK+ ++  A  +   ++  G+ P  VI
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNTL  G  ++  +  AF +F++M+   +  D   Y   I+GLCK   + +A +L   + 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +  +  +N LID    +G+L+  + +   + +  + +DV+++  ++ A C +GK+ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 358 KARDLFLDM 366
           +A  +  DM
Sbjct: 314 EAVAILDDM 322



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 139/277 (50%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  +YN +I G   +   ++A  +F EM+D GV PN +++N +++   K G ++   RL
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M+  G +PN   YN L+ G C  GR++    L   M S     + F+YSIL +G  +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E    LSL++E L KG+       + L  GL +  +V +A ++ + +   G+   T  
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T I+G C+   +  A  +F  ++      D   YN LI+GLCK   +  A +L   + 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  +   V T+N +I A    G+++K   +  DM+ K
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQK 290



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 6/268 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L M++   G +P+V T+NTLI+     G       +  +M     + G+  K + +
Sbjct: 244 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ----QKGI--KSDVI 297

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +++   CK G + +A  +   M  +++ PN   YNS+I  +  + D  +A  L  +M
Sbjct: 298 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV  ++V++N+++  LC++ ++DEA  L+  +   G+RP+   YNT++   C  G  
Sbjct: 358 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 417

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A EL   M   G +  + +Y  L++       +     LY +ML K ++P   IY  +
Sbjct: 418 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIM 477

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
                      +   L  EM   G+A D
Sbjct: 478 VDAYVRCENDSKVASLKKEMSEKGIAFD 505


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/350 (34%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPNV TY T I   CRT     A +L+EEM       GV+  P+ VT + ++DGLC+ 
Sbjct: 266 GVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMV----RMGVL--PDVVTLSALVDGLCRA 319

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  LF +M+     PN VTY +LI     A   +E+  L  E++ +GV  ++V +
Sbjct: 320 GRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMY 379

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M+ L K GK+DE   +    +     PN   Y  L+D  C  G V+ AE++ + ME 
Sbjct: 380 TSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMED 439

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                NV ++S +ING  K   +  A     +M  +GI P+VV Y T+  G F+  + E 
Sbjct: 440 KSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQES 499

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L+ EM   GV  + +     ++GL KNG + EA  LFR +      LD   Y  LID
Sbjct: 500 ALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLID 559

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           GL K G +  A+++ + L    L  D V YN+ ++ LC  GK  +A  + 
Sbjct: 560 GLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 137/274 (50%), Gaps = 5/274 (1%)

Query: 94  NVVTYNSLIHGFC-YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           + V+YN +I G          A  L  EM  +GV  + V+ N  +  LC++G+++ A+ L
Sbjct: 127 DTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAAL 186

Query: 153 LELMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            E+M++     R +   +N L+DG+C +G +  A      M + G   +V  Y+ L+ G 
Sbjct: 187 AEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGL 246

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  E + A  +   M   G++P+VV Y T        + V+ AF L++EM R GV  D 
Sbjct: 247 CRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDV 306

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-R 329
                 +DGLC+ G   EA  LFR +  +    +   Y  LID L K+ R   +  L   
Sbjct: 307 VTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGE 366

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            + RGV++ D+V Y  ++  L   GK+D+ +D+F
Sbjct: 367 VVSRGVVM-DLVMYTSLMDWLGKQGKIDEVKDMF 399



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 6/152 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA    K++  G +PNV TY T+++G  +      AL+L+ EM     E       N  
Sbjct: 464 KAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEV------NKF 517

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
               +++GL K G +++A+ LF  M    +  + V Y +LI G     +   A  +  E+
Sbjct: 518 IVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQEL 577

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
            ++ + P+ V +NV +N LC  GK  EA  +L
Sbjct: 578 TERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 193/382 (50%), Gaps = 41/382 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ F+YN +I GL R+G    AL +F+EM     + GVV  PN +TY T+IDG  K G +
Sbjct: 192 PDAFSYNVVIAGLWRSGKGSDALKVFDEMV----DMGVV--PNWITYNTMIDGHVKGGDL 245

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK--------------------- 115
           +    L  +M  +   PN+VTYN L+ G C A   +E +                     
Sbjct: 246 EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 305

Query: 116 --------------CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
                          LF E + +GV     + ++++N LCK+GK+ +A ++LE+++  G+
Sbjct: 306 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 365

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P   +YNTL++G+C    +  A  +F  M+S   + +  +Y+ LING CK + +  A  
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L  EM   G+ P V  +NTL        Q+E+ F +  +MQ+ G+ +D  ++ + +   C
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           KNG I EAV +   +       + + YN +ID   +SG  + A+ L   +    + A +V
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIV 545

Query: 342 TYNIMIHALCADGKMDKARDLF 363
           TYN+++  LC   ++D+A +L 
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELI 567



 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 187/350 (53%), Gaps = 6/350 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ FTY+ L +GL RTG +   L+LF E        G        T + +++GLCK+G V
Sbjct: 297 PDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAY------TCSILLNGLCKDGKV 350

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA+++   +    + P  V YN+LI+G+C   D   A C+F +M  + ++P+ +++N +
Sbjct: 351 AKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNAL 410

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LCK   + +A  L+  M + GV P+   +NTL+D +   G++ +   +   M+  G 
Sbjct: 411 INGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGI 470

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +V S+  ++  +CKN +I  A+++  +M+ K + P+  +YN++     E    E+AF 
Sbjct: 471 KSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 530

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L ++M+  GV+A    Y   + GLC++  I EA EL  TLR      D+ +YN +I   C
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             G    A EL + + +  +   + TY+ ++ AL + G++     L+  M
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQM 640



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 179/362 (49%), Gaps = 4/362 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A F  L   G  P+ F +N ++      G   VAL +   M    G       P+  +Y 
Sbjct: 143 AAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEG----APPPDAFSYN 198

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I GL + G    A ++F +M D  + PN +TYN++I G     D      L  +M+  
Sbjct: 199 VVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHD 258

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +PN+V++NV+++ LC+ G+MDE   L++ M    + P+ F Y+ L DG   TG     
Sbjct: 259 GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTM 318

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF      G     ++ SIL+NG CK+ ++  A  +   ++  G+ P  VIYNTL  G
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             ++  +  AF +F++M+   +  D   Y   I+GLCK   + +A +L   +     +  
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  +N LID    +G+L+  + +   + +  + +DV+++  ++ A C +GK+ +A  +  
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498

Query: 365 DM 366
           DM
Sbjct: 499 DM 500



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 162/301 (53%), Gaps = 6/301 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P    YNTLING C+      A  +FE+M + +       +P+ +TY  +I+GLCK 
Sbjct: 364 GLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH------IRPDHITYNALINGLCKL 417

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V KA++L ++M+   ++P+V T+N+LI  +  A    +   +  +M  +G++ +V+SF
Sbjct: 418 EMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISF 477

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++   CKNGK+ EA  +L+ MI   V PNA VYN+++D +  +G   +A  L   M++
Sbjct: 478 GSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKN 537

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++ +Y++L+ G C++ +I+ A  L   + ++G++PDVV YNT+          ++
Sbjct: 538 SGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDK 597

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L  EM ++G+      Y T +  L   G + +   L++ +     E     Y  ++D
Sbjct: 598 ALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVD 657

Query: 314 G 314
            
Sbjct: 658 A 658



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 6/330 (1%)

Query: 46  ANGNGEFGVV----CKPNTVTYTTIIDGLCKEGFVDKAKELFLKM--KDENINPNVVTYN 99
           A+    FG++     +P+T  +  ++      G +D A  +  +M   +    P+  +YN
Sbjct: 139 ADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMVRRMGRSEGAPPPDAFSYN 198

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            +I G   +   ++A  +F EM+D GV PN +++N +++   K G ++   RL + M+  
Sbjct: 199 VVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLRDQMLHD 258

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G +PN   YN L+ G C  GR++    L   M S     + F+YSIL +G  +  E    
Sbjct: 259 GPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGESRTM 318

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           LSL++E L KG+       + L  GL +  +V +A ++ + +   G+   T  Y T I+G
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLING 378

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            C+   +  A  +F  ++      D   YN LI+GLCK   +  A +L   + +  +   
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           V T+N +I A    G+++K   +  DM+ K
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/268 (25%), Positives = 130/268 (48%), Gaps = 6/268 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L M++   G +P+V T+NTLI+     G       +  +M     + G+  K + +
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ----QKGI--KSDVI 475

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +++   CK G + +A  +   M  +++ PN   YNS+I  +  + D  +A  L  +M
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 535

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV  ++V++N+++  LC++ ++DEA  L+  +   G+RP+   YNT++   C  G  
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A EL   M   G +  + +Y  L++       +     LY +ML K ++P   IY  +
Sbjct: 596 DKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIM 655

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
                      +   L  EM   G+A D
Sbjct: 656 VDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 194/365 (53%), Gaps = 10/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++ + G  P+V+TYN +I+G C++G    AL + + +   NG     C P+  
Sbjct: 302 DARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMEQNG-----CNPDDW 355

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLC  G +D+A+EL          P V+T+ +LI+G+C A   ++A  +   M
Sbjct: 356 TYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNM 414

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +    + ++ ++ V++N L K  ++ EA   L  M   G+ PN   Y +++DG+C  G V
Sbjct: 415 ISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMV 474

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+F  ME  GC  N ++Y  LI G  ++K++  A++L ++M   GI P V+ Y TL
Sbjct: 475 GAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTL 534

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + H+ + AF+LF+ M+++G+  D  AY    D LCK+G   EA        ++  
Sbjct: 535 IQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVV-- 592

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L    Y  L+DG  K+G    A  L   +      AD+ TY++++ ALC   K+++A  
Sbjct: 593 -LTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALS 651

Query: 362 LFLDM 366
           +   M
Sbjct: 652 ILDQM 656



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/361 (32%), Positives = 182/361 (50%), Gaps = 7/361 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F  LR  G + + +T N L+ G CRT     A  L   M        + C+ N  +YT +
Sbjct: 202 FCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPL------MGCRRNEYSYTIL 255

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I GLC+   V +A  L   M  +  + N+ TY  LI G C     ++A+ L  EM  +GV
Sbjct: 256 IQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGV 315

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            P+V ++N +++  CK+G+M +A  +  LM Q G  P+ + YN+L+ G C  G+++ AEE
Sbjct: 316 VPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEE 374

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           L     + G    V +++ LINGYCK + I+ AL + S M+S   K D+  Y  L   L 
Sbjct: 375 LLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLI 434

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  +++ A +  +EM  +G+A +   Y + IDG CK G +  A+E+F+ +       +  
Sbjct: 435 KKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAW 494

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            Y  LI GL +  +L  A  L   +    +   V+TY  +I   C   + D A  LF  M
Sbjct: 495 TYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMM 554

Query: 367 E 367
           E
Sbjct: 555 E 555



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 172/407 (42%), Gaps = 42/407 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------NGEF 52
           +A AL  K++  G  P V TY TLI G C+      A  LFE M  NG        N   
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 570

Query: 53  GVVCKP-----------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
             +CK                    VTYT+++DG  K G  D A  L  KM +E    ++
Sbjct: 571 DALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
            TY+ L+   C     NEA  +  +M   GV+ N+V++ +I++E+ K GK D A  L   
Sbjct: 631 YTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNE 690

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           MI  G +P+A  Y   +  +C  GR+  AE L   ME  G   +V +Y+I ING      
Sbjct: 691 MISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGY 750

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLF-----IGLFEIHQVERA-----------FKLFD 259
           I+ A S    M+    +P+   Y  L      + L   H V+ +           ++L +
Sbjct: 751 IDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLE 810

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M +HG+      Y + I G CK   + EA  L   +       +   Y  LI   C   
Sbjct: 811 RMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIK 870

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               A      +        + +Y+ +I  LC +G  D+A+ LF D+
Sbjct: 871 LFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDL 917



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/364 (29%), Positives = 160/364 (43%), Gaps = 22/364 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L  K+   GC+ +++TY+ L+  LC+      AL++ ++M       GV C  N V 
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVS----GVKC--NIVA 667

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT II  + KEG  D AK LF +M      P+  TY   I  +C      EA+ L  EM 
Sbjct: 668 YTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEME 727

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC------ 176
             GV P+VV++N+ +N     G +D A   L+ M+     PN + Y  L+  F       
Sbjct: 728 RDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLIN 787

Query: 177 -----LTGRVNRAE-----ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                 +G  N  E     +L   M   G    V +YS +I G+CK   +E A  L   M
Sbjct: 788 AHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHM 847

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L K I P+  IY  L     +I    +A     +M   G      +Y   I GLC  G  
Sbjct: 848 LGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDY 907

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             A  LF  L  + Y  +  A+  L DGL K+G +    +L  ++       D  +Y+++
Sbjct: 908 DRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967

Query: 347 IHAL 350
             ++
Sbjct: 968 TDSI 971



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 155/310 (50%), Gaps = 1/310 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+TVTY T+I   CK+G +  A   F  +++  +  +  T N+L+ G+C  +D  +A  L
Sbjct: 177 PDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWL 236

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            + M   G + N  S+ +++  LC+   + EA  L+ +M+  G   N   Y  L+ G C 
Sbjct: 237 LMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCK 296

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR++ A  L   M   G   +V++Y+ +I+GYCK+  ++ AL + + M   G  PD   
Sbjct: 297 EGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWT 356

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN+L  GL    +++ A +L +     G       +   I+G CK   I +A+ +   + 
Sbjct: 357 YNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMI 415

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +LD++AY  LI+ L K  RLK A E    +    L  +VVTY  +I   C  G + 
Sbjct: 416 SSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVG 475

Query: 358 KARDLFLDME 367
            A ++F  ME
Sbjct: 476 AALEVFKLME 485



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 126/244 (51%), Gaps = 3/244 (1%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L+  ++ +G+ P+ V++N ++   CK G +  A R   L+ + G++ + +  N L+ G+C
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            T  + +A  L + M  MGC+ N +SY+ILI G C+ + +  AL L   M+  G   ++ 
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLH 285

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y  L  GL +  ++  A  L DEM   GV    W Y   IDG CK+G + +A+ +   +
Sbjct: 286 TYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALCADGK 355
                  D   YN LI GLC  G+L  A EL   ++ RG     V+T+  +I+  C   +
Sbjct: 346 EQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARG-FTPTVITFTNLINGYCKAER 403

Query: 356 MDKA 359
           +D A
Sbjct: 404 IDDA 407



 Score =  124 bits (311), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 142/306 (46%), Gaps = 1/306 (0%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y   +  L +    +   +L+  +  E + P+ VTYN++I  +C       A   F  + 
Sbjct: 147 YNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLR 206

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+Q +  + N ++   C+   + +A  LL +M  +G R N + Y  L+ G C    V 
Sbjct: 207 ESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVR 266

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M   GC  N+ +Y++LI G CK   I  A  L  EM  +G+ P V  YN + 
Sbjct: 267 EALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMI 326

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  +++ A  +   M+++G   D W Y + I GLC  G + EA EL        + 
Sbjct: 327 DGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAIARGFT 385

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  +  LI+G CK+ R+  A  +  ++       D+  Y ++I+ L    ++ +A++ 
Sbjct: 386 PTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKET 445

Query: 363 FLDMEA 368
             +M A
Sbjct: 446 LNEMFA 451



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 114/256 (44%), Gaps = 22/256 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+V TYN  ING    G+   A +  + M + +      C+PN  
Sbjct: 718 EAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDAS------CEPNCW 771

Query: 62  TYTTIID-----GLCKEGFVDKAK-----------ELFLKMKDENINPNVVTYNSLIHGF 105
           TY  ++       L    +VD +            +L  +M    +NP VVTY+S+I GF
Sbjct: 772 TYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGF 831

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C A    EA  L   M+ + + PN   + +++   C      +A   +  MI+ G +P  
Sbjct: 832 CKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQL 891

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y+ L+ G C  G  +RA+ LF  +  M   HN  ++ IL +G  K   ++    L + 
Sbjct: 892 ESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAA 951

Query: 226 MLSKGIKPDVVIYNTL 241
           M ++  + D   Y+ L
Sbjct: 952 MDNRHCRIDSESYSML 967


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 206/438 (47%), Gaps = 76/438 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++M++R  G  P+V+++   +   CRT     AL L   M++        C+ N V
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQG------CEMNVV 182

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENIN----------------------------- 92
            Y T++ G  +E F D+  ELF KM    ++                             
Sbjct: 183 AYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKV 242

Query: 93  ------PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                 PN+ TYN  I G C   + + A  +   ++DQG +P+VV++N ++  LCKN K 
Sbjct: 243 IKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKF 302

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA   L  ++  G+ P++F YNTL+ G+C  G V  AE + V+    G   + F+Y  L
Sbjct: 303 QEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSL 362

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C   E   AL+L++E L KGIKP+V++YNTL  GL     +  A +L  EM   G+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGL 422

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFR------------TLRILKY------------- 301
             +   +   ++GLCK G + +A  L +            T  IL +             
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 302 ----------ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
                     + D+  YN L++GLCK+ + +   E ++++       ++ T+NI++ +LC
Sbjct: 483 ILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLC 542

Query: 352 ADGKMDKARDLFLDMEAK 369
              K+DKA  L  +M+ K
Sbjct: 543 RYHKLDKALGLLEEMKNK 560



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/405 (30%), Positives = 195/405 (48%), Gaps = 44/405 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPNT 60
           EA     KL   G EP+ FTYNTLI G C+ G   +A  +       N  F G V  P+ 
Sbjct: 304 EAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILV-----NAVFNGFV--PDE 356

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY ++IDGLC EG  ++A  LF +   + I PNV+ YN+LI G        EA  L  E
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASE 416

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P V +FN+++N LCK G + +A  L+++MI  G  P+ F +N L+ G+    +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A E+   M   G   +V++Y+ L+NG CK  + E  +  Y  M+ KG  P++  +N 
Sbjct: 477 MENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL- 299
           L   L   H++++A  L +EM+   V  D   + T IDG CKNG +  A  LFR +  + 
Sbjct: 537 LLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVY 596

Query: 300 -------KYELDIRA----------------------------YNCLIDGLCKSGRLKIA 324
                   Y + I A                            Y  ++DG CK+G + + 
Sbjct: 597 MVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLG 656

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++    +     I  + T   +I+ LC + ++ +A  +   M  K
Sbjct: 657 YKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701



 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 182/354 (51%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V TYN LI GLC+      A     ++ N   E      P++ TY T+I G CK 
Sbjct: 281 GPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE------PDSFTYNTLIAGYCKG 334

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A+ + +        P+  TY SLI G C+  + N A  LF E + +G++PNV+ +
Sbjct: 335 GMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  L   G + EA++L   M + G+ P    +N L++G C  G V+ A+ L   M S
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++F+++ILI+GY    ++E AL +   M+  G+ PDV  YN+L  GL +  + E 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             + +  M   G A + + +   ++ LC+   + +A+ L   ++      D   +  LID
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIMIHALCADGKMDKARDLFLDM 366
           G CK+G L  A+ LFR +    +++    TYNI+IHA      +  A  LF +M
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEM 628



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 180/366 (49%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L  K+   G  PN+FTYN  I GLC+ G    A+ +   + +         KP+ V
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGP------KPDVV 287

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCK     +A+    K+ +E + P+  TYN+LI G+C       A+ + +  
Sbjct: 288 TYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNA 347

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+  ++  +++ LC  G+ + A  L    +  G++PN  +YNTL+ G    G +
Sbjct: 348 VFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLI 407

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M   G    V +++IL+NG CK   +  A  L   M+SKG  PD+  +N L
Sbjct: 408 LEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     ++E A ++ D M  +GV  D + Y + ++GLCK     + +E ++T+     
Sbjct: 468 IHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGC 527

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  +N L++ LC+  +L  A  L   +    +  D VT+  +I   C +G +D A  
Sbjct: 528 APNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587

Query: 362 LFLDME 367
           LF  ME
Sbjct: 588 LFRKME 593



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++  + CEP VF+YN +++ L  +G+   A  ++  M +     G+   P+  
Sbjct: 94  EAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDR----GIT--PDVY 147

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++T  +   C+      A  L   M  +    NVV Y +++ GF   N  +E   LF +M
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV   + +FN +++ LCK G + E  +LL+ +I+ GV PN F YN  + G C  G +
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   +   G K +V +Y+ LI G CKN + + A     +++++G++PD   YNTL
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V+ A ++      +G   D + YR+ IDGLC  G    A+ LF        
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  YN LI GL   G +  A +L   +    LI +V T+NI+++ LC  G +  A  
Sbjct: 388 KPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 362 LFLDMEAK 369
           L   M +K
Sbjct: 448 LVKVMISK 455



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 159/316 (50%), Gaps = 13/316 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EAA L  ++   G  P V T+N L+NGLC+ G    A  L + M +  G F     P+ 
Sbjct: 408 LEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS-KGYF-----PDI 461

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  +I G   +  ++ A E+   M D  ++P+V TYNSL++G C  + + +    +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  PN+ +FN+++  LC+  K+D+A  LLE M    V P+A  + TL+DGFC  G 
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 181 VNRAEELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           ++ A  LF  ME +    C  +  +Y+I+I+ + +   +  A  L+ EM+ + + PD   
Sbjct: 582 LDGAYTLFRKMEEVYMVSC--STPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  +  G  +   V+  +K   EM  +G           I+ LC    + EA  +    R
Sbjct: 640 YRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH--R 697

Query: 298 ILKYELDIRAYNCLID 313
           +++  L   A N + D
Sbjct: 698 MVQKGLVPEAVNTIFD 713



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 148/334 (44%), Gaps = 37/334 (11%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           ++G V +A  +F +M   +  P V +YN+++     +  +++A  +++ M D+G+ P+V 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF---------------- 175
           SF + M   C+  +   A RLL  M   G   N   Y T++ GF                
Sbjct: 148 SFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKM 207

Query: 176 -------------------CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
                              C  G V   E+L   +   G   N+F+Y+  I G C+  E+
Sbjct: 208 LASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGEL 267

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A+ +   ++ +G KPDVV YN L  GL +  + + A     ++   G+  D++ Y T 
Sbjct: 268 DAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTL 327

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGV 335
           I G CK G +  A  +        +  D   Y  LIDGLC  G    A  LF  +L +G+
Sbjct: 328 IAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +V+ YN +I  L   G + +A  L  +M  K
Sbjct: 388 K-PNVILYNTLIKGLSNQGLILEAAQLASEMSEK 420


>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
          Length = 375

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 184/354 (51%), Gaps = 9/354 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  ++ L+  + R  H    L+L+++M +    FG+    NT T   +I+  C    +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDS----FGI--PHNTYTLNILINSFCHLNRL 61

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  +   +      P+  T+ +LI G C      EA  LF +M  +G QP+V+++  +
Sbjct: 62  GFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTL 121

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LCK+ ++ EA  L   M+  G+ PN F Y++L+ G C+ G    A  LF +M     
Sbjct: 122 INGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKI 181

Query: 197 KHNVFSYSILINGYCKNKEIE---GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             +  +++ L++  CK   I+    A+ L+ EM  +G+ PD V YNTL  GL  + ++  
Sbjct: 182 MPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRD 241

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF EM  +G   D   YR   D LCKN  + EA+ L + +     + DI  Y+ ++D
Sbjct: 242 AIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMD 301

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G+C++G L+ A +LF  L    L  DV TY IMI+ LC  G + +A  LF +M+
Sbjct: 302 GMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD 355



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 9/327 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L+ ++  FG   N +T N LIN  C       A ++  ++        +  +P+T T+T
Sbjct: 31  SLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDI------LKLGYQPSTATFT 84

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC EG + +A +LF KM  E   P+V+TY +LI+G C      EA  LF +M+ +
Sbjct: 85  TLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAK 144

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV--- 181
           G+ PN  +++ +++ LC  G   EA RL   MI   + P+   +NTL+D  C  G +   
Sbjct: 145 GISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIM 204

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A  LF  M   G   +  +Y+ LI+G C    +  A++L+ EM+  G  PD+V Y  L
Sbjct: 205 DKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRIL 264

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
           F  L + H++  A  L   ++   +  D   Y   +DG+C+ G +  A +LF  L     
Sbjct: 265 FDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGL 324

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELF 328
             D+R Y  +I+GLC+ G L  A +LF
Sbjct: 325 HPDVRTYTIMINGLCQQGLLAEASKLF 351



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/300 (36%), Positives = 163/300 (54%), Gaps = 13/300 (4%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G +P+  T+ TLI GLC  G    AL LF++M  G G      +P+ +TY T+I+GLCK
Sbjct: 74  LGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM-TGEG-----FQPDVLTYGTLINGLCK 127

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +  + +A  LF  M  + I+PN  TY+SLIHG C    W EA  LF  M+ + + P+ ++
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 133 FNVIMNELCKNGK---MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           FN +++ LCK G    MD+A  L E M Q G+ P+   YNTL+ G C  GR+  A  LF 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   G   ++ +Y IL +  CKN  +  A+ L   +    + PD+ IY+ +  G+    
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           ++E A  LF ++   G+  D   Y   I+GLC+ G + EA +LF  +     E DI +Y+
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMD----ENDIESYS 363



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 162/315 (51%), Gaps = 3/315 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V ++ ++  + +         L+ +M    I  N  T N LI+ FC+ N    A  +
Sbjct: 8   PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+  +F  ++  LC  GK+ EA +L + M   G +P+   Y TL++G C 
Sbjct: 68  LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             ++  A  LF  M + G   N F+YS LI+G C     + A+ L+  M+ + I PD + 
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187

Query: 238 YNTLFIGLFE---IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +NTL   L +   I  +++A  LF+EM + G+  DT  Y T I GLC  G + +A+ LF 
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            + +     D+  Y  L D LCK+ RL  A  L + +    L  D+  Y+I++  +C  G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307

Query: 355 KMDKARDLFLDMEAK 369
           +++ ARDLF  + +K
Sbjct: 308 ELEAARDLFSKLSSK 322



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 139/248 (56%), Gaps = 9/248 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF  +   G  PN FTY++LI+GLC  GH   A+ LF  M +          P+ +
Sbjct: 133 EALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK------IMPDQL 186

Query: 62  TYTTIIDGLCKEGFV---DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           T+ T++D LCKEG +   DKA  LF +M  + + P+ VTYN+LIHG C+     +A  LF
Sbjct: 187 TFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALF 246

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+  G  P++V++ ++ + LCKN ++ EA  LL+++    + P+  +Y+ +MDG C  
Sbjct: 247 HEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRA 306

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A +LF  + S G   +V +Y+I+ING C+   +  A  L+ EM    I+      
Sbjct: 307 GELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDIESYSTFS 366

Query: 239 NTLFIGLF 246
              F G+F
Sbjct: 367 RNAFKGIF 374



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 108/217 (49%), Gaps = 3/217 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+++   P+   ++ L+         +    L+  M+S G  HN ++ +ILIN +C    
Sbjct: 1   MLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNR 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A S+  ++L  G +P    + TL  GL    ++  A +LFD+M   G   D   Y T
Sbjct: 61  LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+GLCK+  + EA+ LF  +       +   Y+ LI GLC  G  K A  LF ++    
Sbjct: 121 LINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 180

Query: 336 LIADVVTYNIMIHALCADGK---MDKARDLFLDMEAK 369
           ++ D +T+N ++ ALC +G    MDKA  LF +M  +
Sbjct: 181 IMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQ 217


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 177/339 (52%), Gaps = 6/339 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV TY  LI    R+     A  LF+EM     E      P+   YT+II+  CK G + 
Sbjct: 261 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE------PDVYIYTSIINWNCKFGNMK 314

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  LF +M +  + PN  TY +LI+G C A +   A+ +  +M  +GV  N V FN +M
Sbjct: 315 RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 374

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK G +DEA RL  +M Q G   +AF  N +  GFC + R   A+ L ++ME  G  
Sbjct: 375 DGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 434

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV S+SILI+ YCK +    A  L+  M  KG  P VV YN       +  ++E A+KL
Sbjct: 435 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 494

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            +EMQ  G+  DT+ Y + IDG   +G +  A+ELF  +  L    ++  Y  +I GL K
Sbjct: 495 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 554

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            GR   A++L+  + +  ++ D   Y+ +I +L   G +
Sbjct: 555 DGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 593



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 188/369 (50%), Gaps = 12/369 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCR---TGHTIVALNLFEEMANGNGEFGVVCK 57
           + A AL  +L   G +P+V TYNTL+NG       G     L+L E+          V  
Sbjct: 209 VRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKN---------VVD 259

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            N  TYT +I+   +   +++A++LF +M  + I P+V  Y S+I+  C   +   A  L
Sbjct: 260 YNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVL 319

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM ++ + PN  ++  ++N  CK G+M  A  ++  M   GV  N  ++NTLMDG+C 
Sbjct: 320 FDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCK 379

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G ++ A  L   M+  G + + F+ +I+ +G+C++   E A  L   M  +G+ P+VV 
Sbjct: 380 KGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS 439

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           ++ L     +      A +LF  M++ G A     Y  FI+  CK G + EA +L   ++
Sbjct: 440 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 499

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D   Y  LIDG   SG +  A ELF  +P+  L  +VVTY ++I  L  DG+ D
Sbjct: 500 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 559

Query: 358 KARDLFLDM 366
           +A  L+ +M
Sbjct: 560 EAFKLYDEM 568



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 149/275 (54%), Gaps = 6/275 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN +TY  LING C+ G    A    E M N     GV    N V + T++DG CK+G +
Sbjct: 330 PNAYTYGALINGACKAGEMKAA----EMMVNDMQSKGV--DVNRVIFNTLMDGYCKKGMI 383

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L   M+ +    +  T N +  GFC +N   EAK L + M ++GV PNVVSF+++
Sbjct: 384 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 443

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK     EA RL ++M + G  P+   YN  ++ +C  G++  A +L   M+  G 
Sbjct: 444 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 503

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             + ++Y+ LI+G   +  ++ AL L++EM   G+  +VV Y  +  GL +  + + AFK
Sbjct: 504 MPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 563

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           L+DEM + G+  D   Y + I  L K G +V  +E
Sbjct: 564 LYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 598



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 177/374 (47%), Gaps = 41/374 (10%)

Query: 28  GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
            L R+G+  + +    +M +   E  V       ++T ++DGLCK+G V +AK L  ++ 
Sbjct: 166 ALKRSGNMELCVEFLRQMVDSGIEIRVC------SWTAVVDGLCKKGEVVRAKALMDELV 219

Query: 88  DENINPNVVTYNSLIHGFCYAND----------------------------W-------N 112
            +   P+V+TYN+L++G+    D                            W        
Sbjct: 220 CKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIE 279

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           EA+ LF EM+ +G++P+V  +  I+N  CK G M  A  L + M +  + PNA+ Y  L+
Sbjct: 280 EAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 339

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +G C  G +  AE +   M+S G   N   ++ L++GYCK   I+ AL L + M  KG +
Sbjct: 340 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 399

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            D    N +  G    ++ E A +L   M+  GVA +  ++   ID  CK     EA  L
Sbjct: 400 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 459

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F+ +        +  YN  I+  CK G+++ A++L   +    L+ D  TY  +I    A
Sbjct: 460 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 519

Query: 353 DGKMDKARDLFLDM 366
            G +D+A +LF +M
Sbjct: 520 SGNVDRALELFNEM 533



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 71/165 (43%)

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +L   Y  N+  + +L ++     KG + D        + L     +E   +   +M   
Sbjct: 127 MLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDS 186

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+     ++   +DGLCK G +V A  L   L    ++  +  YN L++G  +   +   
Sbjct: 187 GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGV 246

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            E+   + + V+  +V TY ++I       K+++A  LF +M  K
Sbjct: 247 NEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 291


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 198/367 (53%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ ++   G   NV+T N ++N LC+ G  +  +  F       G +     P+ VT
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGK-MEKVGTFLSQVQEKGVY-----PDIVT 272

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I     +G +++A EL   M  +  +P V TYN++I+G C    +  AK +F EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  ++  ++ E CK G + E  ++   M    V P+   ++++M  F  +G ++
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A   F S++  G   +   Y+ILI GYC+   I  A++L +EML +G   DVV YNT+ 
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   +  A KLF+EM    +  D++     IDG CK G +  A+ELF+ ++  +  
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LD+  YN L+DG  K G +  A E++  +    ++   ++Y+I+++ALC+ G + +A  +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572

Query: 363 FLDMEAK 369
           + +M +K
Sbjct: 573 WDEMISK 579



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 182/366 (49%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G  P V+TYNT+INGLC+ G    A  +F EM            P++ 
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDST 341

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++   CK+G V + +++F  M+  ++ P++V ++S++  F  + + ++A   F  +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ P+ V + +++   C+ G +  A  L   M+Q G   +   YNT++ G C    +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A++LF  M       + ++ +ILI+G+CK   ++ A+ L+ +M  K I+ DVV YNTL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  ++ A +++ +M    +     +Y   ++ LC  G++ EA  ++  +     
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +   N +I G C+SG           +     + D ++YN +I+    +  M KA  
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641

Query: 362 LFLDME 367
           L   ME
Sbjct: 642 LVKKME 647



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 176/361 (48%), Gaps = 8/361 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E   +F  +R     P++  ++++++   R+G+   AL  F    N   E G++  P+ 
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF----NSVKEAGLI--PDN 410

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT +I G C++G +  A  L  +M  +    +VVTYN+++HG C      EA  LF E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++ + P+  +  ++++  CK G +  A  L + M +  +R +   YNTL+DGF   G 
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A+E++  M S        SYSIL+N  C    +  A  ++ EM+SK IKP V+I N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G              ++M   G   D  +Y T I G  +   + +A  L + +   +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650

Query: 301 YEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             L  D+  YN ++ G C+  ++K A  + R +    +  D  TY  MI+   +   + +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710

Query: 359 A 359
           A
Sbjct: 711 A 711



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 148/281 (52%), Gaps = 8/281 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  +V TYNT+++GLC+      A  LF EM            P++ T T +IDG CK 
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER------ALFPDSYTLTILIDGHCKL 493

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A ELF KMK++ I  +VVTYN+L+ GF    D + AK ++ +M+ + + P  +S+
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++++N LC  G + EA R+ + MI   ++P   + N+++ G+C +G  +  E     M S
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPDVVIYNTLFIGLFEIHQV 251
            G   +  SY+ LI G+ + + +  A  L  +M  +  G+ PDV  YN++  G    +Q+
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           + A  +  +M   GV  D   Y   I+G      + EA  +
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/336 (28%), Positives = 156/336 (46%), Gaps = 9/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  ++  G  P+   Y  LI G CR G   VA+NL  EM          C  + V
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG------CAMDVV 446

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TI+ GLCK   + +A +LF +M +  + P+  T   LI G C   +   A  LF +M
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ ++ +VV++N +++   K G +D A  +   M+   + P    Y+ L++  C  G +
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  ++  M S   K  V   + +I GYC++       S   +M+S+G  PD + YNTL
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626

Query: 242 FIGLFEIHQVERAFKLFDEMQRH--GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
             G      + +AF L  +M+    G+  D + Y + + G C+   + EA  + R +   
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRG 334
               D   Y C+I+G      L  A+ +    L RG
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 35/339 (10%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I  L + G+V+ A  ++ ++    +  NV T N +++  C      +      ++ ++G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P++V++N +++     G M+EA  L+  M   G  P  + YNT+++G C  G+  RA+
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK---------------- 229
           E+F  M   G   +  +Y  L+   CK  ++     ++S+M S+                
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385

Query: 230 -------------------GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
                              G+ PD VIY  L  G      +  A  L +EM + G A D 
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y T + GLCK   + EA +LF  +       D      LIDG CK G L+ A ELF+ 
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    +  DVVTYN ++      G +D A++++ DM +K
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 123/234 (52%), Gaps = 8/234 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K++      +V TYNTL++G  + G    A  ++ +M +          P  ++
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE------ILPTPIS 552

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +++ LC +G + +A  ++ +M  +NI P V+  NS+I G+C + + ++ +    +M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI--QIGVRPNAFVYNTLMDGFCLTGR 180
            +G  P+ +S+N ++    +   M +A  L++ M   Q G+ P+ F YN+++ GFC   +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +  AE +   M   G   +  +Y+ +ING+     +  A  ++ EML +G  PD
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 17/327 (5%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-----------------NINPNVVTYN 99
           K  +++ + +I  L + G +  A+   L+M                    N   N   ++
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD 169

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            LI  +  A    EA   F  +  +G   ++ + N ++  L + G ++ A  + + + + 
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           GV  N +  N +++  C  G++ +       ++  G   ++ +Y+ LI+ Y     +E A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             L + M  KG  P V  YNT+  GL +  + ERA ++F EM R G++ D+  YR+ +  
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            CK G +VE  ++F  +R      D+  ++ ++    +SG L  A   F S+    LI D
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
            V Y I+I   C  G +  A +L  +M
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEM 436



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 17/256 (6%)

Query: 131 VSFNVIMNELCKNGKMDEA-SRLLELMIQIGVR----------------PNAFVYNTLMD 173
           +S + +++ L ++G++ +A S LL ++ + GV                  N  V++ L+ 
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            +    ++  A E F  + S G   ++ + + LI    +   +E A  +Y E+   G+  
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +V   N +   L +  ++E+      ++Q  GV  D   Y T I      G + EA EL 
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +    +   +  YN +I+GLCK G+ + A E+F  + R  L  D  TY  ++   C  
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353

Query: 354 GKMDKARDLFLDMEAK 369
           G + +   +F DM ++
Sbjct: 354 GDVVETEKVFSDMRSR 369


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 196/367 (53%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++ V G EPN+ T N LIN  C  G    + ++  ++     + G   +P+T+T
Sbjct: 84  AISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKIL----KLGY--QPDTIT 137

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T++ GLC +G V ++     K+  +    N V+Y +L++G C   +   A  L   + 
Sbjct: 138 LNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIE 197

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+  +P+VV ++ I++ LCK+  +++A      M   G+ PN   Y+TL+ GFCL G++ 
Sbjct: 198 DRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLM 257

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M       NV++Y+ILI+  CK  +++ A  L +EM  KG   DVV YN++ 
Sbjct: 258 GAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVL 317

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   +++A  LF +M++ G+  + + Y   IDGLCK G +  A +LF+ L +    
Sbjct: 318 DGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCC 377

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           +D+R YN +I GLCK G    A  +   +     I + VT++I+I +L    + DKA  L
Sbjct: 378 IDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKL 437

Query: 363 FLDMEAK 369
              M AK
Sbjct: 438 LHGMIAK 444



 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/366 (33%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +  + F +L +    P +  +  ++  L +  H   A++L  +M     E      PN V
Sbjct: 48  DTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIE------PNLV 101

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C  G +  +  +  K+      P+ +T N+L+ G C   +   +     ++
Sbjct: 102 TLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKV 161

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG Q N VS+  ++N LCK G+   A +LL ++     RP+  +Y+T++DG C    V
Sbjct: 162 VAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIV 221

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A + F  M + G   NV +YS LI G+C   ++ GA SL +EM+ K I P+V  YN L
Sbjct: 222 NQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNIL 281

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V+ A KL  EM   G  AD   Y + +DGLCK+  + +A  LF  ++    
Sbjct: 282 IDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGI 341

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +   Y  LIDGLCK GRLK A +LF+ L       DV TYN+MI  LC +G  DKA  
Sbjct: 342 QPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALA 401

Query: 362 LFLDME 367
           +   ME
Sbjct: 402 MKSKME 407



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 156/312 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+  L K      A  L  +M+ + I PN+VT N LI+ FC+      +  +
Sbjct: 63  PPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSV 122

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+ ++ N +M  LC  G++  +    + ++  G + N   Y TL++G C 
Sbjct: 123 LGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 182

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +L   +E    + +V  YS +I+G CK+K +  A   +SEM ++GI P+V+ 
Sbjct: 183 IGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVIT 242

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+TL  G     Q+  AF L +EM    +  + + Y   ID LCK G + EA +L   + 
Sbjct: 243 YSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMH 302

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN ++DGLCKS  L  A  LF  + +  +  +  TY  +I  LC  G++ 
Sbjct: 303 HKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLK 362

Query: 358 KARDLFLDMEAK 369
            A+ LF  +  K
Sbjct: 363 NAQKLFQHLLVK 374



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 142/251 (56%), Gaps = 6/251 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+V  Y+T+I+GLC+      A + F EM N  G F     PN +TY+T+I G C  G 
Sbjct: 202 RPDVVMYSTIIDGLCKDKIVNQAYDFFSEM-NARGIF-----PNVITYSTLIWGFCLAGQ 255

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A  L  +M  +NINPNV TYN LI   C      EAK L  EM  +G   +VV++N 
Sbjct: 256 LMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNS 315

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCK+  +D+A+ L   M + G++PN + Y  L+DG C  GR+  A++LF  +   G
Sbjct: 316 VLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKG 375

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  +V +Y+++I+G CK    + AL++ S+M   G  P+ V ++ +   LFE  + ++A 
Sbjct: 376 CCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAE 435

Query: 256 KLFDEMQRHGV 266
           KL   M   G+
Sbjct: 436 KLLHGMIAKGL 446



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 149/295 (50%)

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           E  VD     F ++      P ++ +  ++        +  A  L  +M  +G++PN+V+
Sbjct: 43  ENVVDDTVSQFNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVT 102

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            N+++N  C  G+M  +  +L  ++++G +P+    NTLM G CL G V R+      + 
Sbjct: 103 LNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVV 162

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           + G + N  SY  L+NG CK  E   A+ L   +  +  +PDVV+Y+T+  GL +   V 
Sbjct: 163 AQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVN 222

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A+  F EM   G+  +   Y T I G C  G ++ A  L   + +     ++  YN LI
Sbjct: 223 QAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILI 282

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           D LCK G++K A +L   +      ADVVTYN ++  LC    +DKA  LF+ M+
Sbjct: 283 DALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMK 337



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 6/195 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A +L  ++ +    PNV+TYN LI+ LC+ G    A  L  EM +  G+       + 
Sbjct: 257 MGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHH-KGQ-----PADV 310

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY +++DGLCK   +DKA  LF+KMK   I PN  TY +LI G C       A+ LF  
Sbjct: 311 VTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQH 370

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +G   +V ++NV+++ LCK G  D+A  +   M   G  PNA  ++ ++        
Sbjct: 371 LLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKDE 430

Query: 181 VNRAEELFVSMESMG 195
            ++AE+L   M + G
Sbjct: 431 NDKAEKLLHGMIAKG 445


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/359 (32%), Positives = 183/359 (50%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           +++  G EP+V T+ TLI   C+      A  L+E M       GV+  P+ VT + ++D
Sbjct: 249 RMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRS----GVL--PDVVTLSALVD 302

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC++G   +A  LF +M    + PN VTY + I         NE+  L  EM+ +GV  
Sbjct: 303 GLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAM 362

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           ++V +  +M+ L K GK++EA  +L   +   + PN   Y  L+D  C  G ++ AE++ 
Sbjct: 363 DLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQML 422

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
           + ME      NV ++S ++NG  K   I  A     +M   GI P+VV Y TL  G F+ 
Sbjct: 423 LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC 482

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
              E A  ++ +M   GV A+ +   + ++GL KNG I EA  LF+ +      LD   Y
Sbjct: 483 QGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNY 542

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L+DGL K+G +  A ++ + L    L  D V YN+ I+ LC  GK  +A+    +M 
Sbjct: 543 ATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMR 601



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 186/367 (50%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF ++   G  PN  TY T I+ L +      +L L  EM +     GV    + V
Sbjct: 312 EAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVS----RGVAM--DLV 365

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTT++D L KEG +++AK++      +NI PN VTY  L+   C A + + A+ + ++M
Sbjct: 366 MYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQM 425

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ V PNVV+F+ I+N L K G + +A+  +  M   G+ PN   Y TL+DGF      
Sbjct: 426 EEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQ 485

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +++  M   G + N F    L+NG  KN  IE A +L+ +M  +G+  D V Y TL
Sbjct: 486 EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATL 545

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+   +  A K+  E+    ++ D   Y  FI+ LC+ G   EA    + +R    
Sbjct: 546 MDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGL 605

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E D   YN +I   C+ G    A +L   +    +  +++TY  ++  L   G ++KA+ 
Sbjct: 606 EPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKY 665

Query: 362 LFLDMEA 368
           L  +M +
Sbjct: 666 LLNEMAS 672



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 166/365 (45%), Gaps = 44/365 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +   ++R  G EP+  TYNT+I+  CR G+T  AL L  EM   +       KPN +
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSS------IKPNLI 645

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY----------------------- 98
           TYTT++ GL + G V+KAK L  +M      P  +TY                       
Sbjct: 646 TYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELM 705

Query: 99  ------------NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                       N+L+H  C      +A  +  EM+ +G+ P+ ++FN ++   CK+  +
Sbjct: 706 MGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHL 765

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A      M+  G+ PN   +NTL+ G    GR+  A+ +   M+ MG + N  +Y IL
Sbjct: 766 DNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDIL 825

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + GY K      AL LY EM+SKG  P    YN+L     +   + +A +LF EM+R GV
Sbjct: 826 VTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGV 885

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
              +  Y   ++G  K     E   L + ++ L ++      + +     K G   + WE
Sbjct: 886 LHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPG---MTWE 942

Query: 327 LFRSL 331
             R L
Sbjct: 943 ARRLL 947



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 167/352 (47%), Gaps = 6/352 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+   YN  IN LCR G    A +  +EM N   E      P+  TY T+I   C+EG 
Sbjct: 571 SPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLE------PDQATYNTMISAQCREGN 624

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             KA +L  +MK  +I PN++TY +L+ G   A    +AK L  EM   G  P  +++  
Sbjct: 625 TSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRR 684

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++     +        + ELM+  G+  +  VYNTL+   C  G   +A  +   M   G
Sbjct: 685 VLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRG 744

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +  +++ LI G+CK+  ++ A + Y++ML +G+ P++  +NTL  GL    ++  A 
Sbjct: 745 IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEAD 804

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +  EM++ G+  +   Y   + G  K    VEA+ L+  +    +      YN LI   
Sbjct: 805 TVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDF 864

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            K+G +  A ELF  + R  ++    TY+I+++         + R L  DM+
Sbjct: 865 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMK 916



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 168/346 (48%), Gaps = 4/346 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T +T + GL RTG    A  L E +  G G  G+      V +  +IDG CK   +  A 
Sbjct: 154 TMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGL----GVVGWNALIDGYCKVQDMAAAL 209

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            +  +M  + ++ +VV YN+L+ GF Y+ D + A  +   M   GV+P+VV+   ++ E 
Sbjct: 210 AVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEY 269

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK  +++EA  L E M++ GV P+    + L+DG C  GR + A  LF  M+ +G   N 
Sbjct: 270 CKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNH 329

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y   I+   K + +  +L L  EM+S+G+  D+V+Y T+   L +  ++E A  +   
Sbjct: 330 VTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRH 389

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
                +  +   Y   +D  C+ G I  A ++   +       ++  ++ +++GL K G 
Sbjct: 390 ALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGC 449

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  A    R +    +  +VVTY  +I         + A D++ DM
Sbjct: 450 IAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDM 495



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 181/391 (46%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E N F  ++L+NGL + G+   A  LF++M    GE G++   + V Y T++DGL K 
Sbjct: 499 GVEANNFIVDSLVNGLRKNGNIEEAEALFKDM----GERGLLL--DHVNYATLMDGLFKT 552

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A ++  ++ + N++P+ V YN  I+  C    ++EAK    EM + G++P+  ++
Sbjct: 553 GNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATY 612

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C+ G   +A +LL  M    ++PN   Y TL+ G    G V +A+ L   M S
Sbjct: 613 NTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMAS 672

Query: 194 MG-----------------------------------CKHNVFSYSILINGYCKNKEIEG 218
            G                                      ++  Y+ L++  C +     
Sbjct: 673 AGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRK 732

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  +  EML +GI PD + +N L +G  +   ++ AF  + +M   G++ +   + T + 
Sbjct: 733 ATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLG 792

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GL   G I EA  +   ++ +  E +   Y+ L+ G  K      A  L+  +     I 
Sbjct: 793 GLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIP 852

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              TYN +I      G M++A++LF +M+ +
Sbjct: 853 KASTYNSLISDFAKAGMMNQAKELFSEMKRR 883



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 176/367 (47%), Gaps = 12/367 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  + +++      PNV T+++++NGL + G    A     +M +          PN VT
Sbjct: 418 AEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSG------IAPNVVT 471

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG  K    + A +++  M  E +  N    +SL++G     +  EA+ LF +M 
Sbjct: 472 YGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMG 531

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+  + V++  +M+ L K G M  A ++ + +++  + P+A VYN  ++  C  G+ +
Sbjct: 532 ERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFS 591

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+     M + G + +  +Y+ +I+  C+      AL L +EM    IKP+++ Y TL 
Sbjct: 592 EAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLV 651

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL--CKNGYIVEAVELFRTLRILK 300
           +GL E   VE+A  L +EM   G       YR  +      ++ Y++  +E+   +    
Sbjct: 652 VGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVI--LEVHELMMGAG 709

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKA 359
              DI  YN L+  LC  G  + A  +    L RG+   D +T+N +I   C    +D A
Sbjct: 710 LHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGI-APDTITFNALILGHCKSSHLDNA 768

Query: 360 RDLFLDM 366
              +  M
Sbjct: 769 FATYAQM 775



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 171/355 (48%), Gaps = 8/355 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  T N++I   C       AL+L    +    +       +TV+Y   + GL ++G   
Sbjct: 79  DPLTLNSIILSYCSLHALRPALSLLRSSSGPQPQVAA----DTVSYNIFLAGLSEQGHGR 134

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN---VVSFN 134
            A  +  +M    +  + VT ++ + G        EA  L  EM+ +G   +   VV +N
Sbjct: 135 LAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAAL-AEMLVRGRGIDGLGVVGWN 193

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++  CK   M  A  ++E M   G+  +   YNTL+ GF  +G  + A E+   M++ 
Sbjct: 194 ALIDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKAD 253

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G + +V +++ LI  YCK K IE A +LY  M+  G+ PDVV  + L  GL    +   A
Sbjct: 254 GVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEA 313

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           + LF EM + GVA +   Y TFID L K   + E++ L   +      +D+  Y  ++D 
Sbjct: 314 YALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDR 373

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L K G+++ A ++ R      +  + VTY +++ A C  G +D A  + L ME K
Sbjct: 374 LGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEK 428



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/324 (25%), Positives = 136/324 (41%), Gaps = 29/324 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           +A  L  +++    +PN+ TY TL+ GL   G    A  L  EMA+              
Sbjct: 627 KALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVL 686

Query: 49  ---NGE-------------FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              +G               G     +   Y T++  LC  G   KA  +  +M    I 
Sbjct: 687 QACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIA 746

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ +T+N+LI G C ++  + A   + +M+ QG+ PN+ +FN ++  L   G++ EA  +
Sbjct: 747 PDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTV 806

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M ++G+ PN   Y+ L+ G+        A  L+  M S G      +Y+ LI+ + K
Sbjct: 807 ICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAK 866

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +  A  L+SEM  +G+      Y+ L  G  ++        L  +M+  G       
Sbjct: 867 AGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGT 926

Query: 273 YRTFIDGLCKNGYIVEAVELFRTL 296
             +      K G   EA  L +TL
Sbjct: 927 ISSMSRAFSKPGMTWEARRLLKTL 950



 Score = 77.4 bits (189), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 6/158 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  +++  G EPN  TY+ L+ G  +  + + AL L+ EM +     G +  P   
Sbjct: 802 EADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK----GFI--PKAS 855

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I    K G +++AKELF +MK   +     TY+ L++G+    +  E + L  +M
Sbjct: 856 TYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDM 915

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            + G +P+  + + +     K G   EA RLL+ + ++
Sbjct: 916 KELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFKV 953


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/356 (32%), Positives = 188/356 (52%), Gaps = 6/356 (1%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           A+L  ++R     PNV  YN++I+ LC+      AL + ++M  G       C P+ +T+
Sbjct: 349 ASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGG------CDPDAITF 402

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           +T+I GLC+EG V +A+ L  +     +NPN+ +Y SLIHGFC   +   A  L +EMM+
Sbjct: 403 STLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMME 462

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G  P+VV+F  +++ L   G++ EA  + E M    + P+A +YN L+ G C    +  
Sbjct: 463 RGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPA 522

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L   M       + + Y+ LI+G+ +N+ ++ A  ++  M  KGI PDVV YN +  
Sbjct: 523 ARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIK 582

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G  +   +  A +    M++ G   D + Y T I G  K G I  A+ L   +   + + 
Sbjct: 583 GYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQP 642

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++ AY+ LI+G CK G    A  LF S+    L  +V+TY I+I +L    K+ +A
Sbjct: 643 NVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRA 698



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 180/391 (46%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN   YN LI+G CR G     + L  EM    G       P  VTY T++  L ++
Sbjct: 289 GCVPNAVFYNVLIDGYCRRGDVGRGILLLGEM-EAKGLL-----PTVVTYGTLMSWLGRK 342

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++K   L  +M++  + PNV  YNS+I   C     ++A  +  +M   G  P+ ++F
Sbjct: 343 GDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITF 402

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + +++ LC+ G++ EA RLL    +  + PN   Y +L+ GFC+ G V  A  L V M  
Sbjct: 403 STLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMME 462

Query: 194 MGCKHNVFS-----------------------------------YSILINGYCKNKEIEG 218
            G   +V +                                   Y++LI+G CK K +  
Sbjct: 463 RGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPA 522

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A +L  EML + + PD  +Y TL  G      ++ A K+F+ M++ G+  D   Y   I 
Sbjct: 523 ARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIK 582

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G C+ G + EAVE   T+R +    D   Y  LI G  K G +  A  L   + +     
Sbjct: 583 GYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQP 642

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +VV Y+ +I+  C  G  D A  LF  ME++
Sbjct: 643 NVVAYSSLINGYCKLGDTDAAECLFGSMESQ 673



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/340 (31%), Positives = 160/340 (47%), Gaps = 6/340 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           ++   ++ GLC  G     L L E        +G  C PN V Y  +IDG C+ G V + 
Sbjct: 260 YSTCVMVRGLCLEGLVEKGLKLIE------ARWGAGCVPNAVFYNVLIDGYCRRGDVGRG 313

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
             L  +M+ + + P VVTY +L+       D  +   L  EM ++ + PNV  +N +++ 
Sbjct: 314 ILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDA 373

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LCK     +A  +L+ M   G  P+A  ++TL+ G C  GRV  AE L           N
Sbjct: 374 LCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPN 433

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           + SY+ LI+G+C   E+  A +L  EM+ +G  PDVV +  L  GL    QV  A  + +
Sbjct: 434 LSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVRE 493

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M    +  D   Y   I GLCK   +  A  L   +       D   Y  LIDG  ++ 
Sbjct: 494 KMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNE 553

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            L  A ++F  + +  +  DVV YN MI   C  G M++A
Sbjct: 554 SLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEA 593



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 185/376 (49%), Gaps = 21/376 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+ L +++   G  P+V T+  LI+GL   G    AL + E+MA           P+   
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ------LLPDANI 506

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I GLCK+  +  A+ L  +M ++N++P+   Y +LI GF      +EA+ +F  M 
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+VV +N ++   C+ G M+EA   +  M ++G  P+ F Y TL+ G+   G ++
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS 626

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M    C+ NV +YS LINGYCK  + + A  L+  M S+G+ P+V+ Y  L 
Sbjct: 627 GALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI 686

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEA------------ 289
             LF+  +V RA   F+ M  +  + + +   + + GLC +   I+ +            
Sbjct: 687 GSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKG 746

Query: 290 --VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
             +++FR L   + +    AYN +I  LC    L  A +L   +       D  T+  ++
Sbjct: 747 ALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLL 806

Query: 348 HALCADGKMDKARDLF 363
           +  C+ GK  + R + 
Sbjct: 807 YGFCSVGKSREWRTIL 822



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 142/309 (45%), Gaps = 2/309 (0%)

Query: 63  YTT--IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           Y+T  ++ GLC EG V+K  +L          PN V YN LI G+C   D      L  E
Sbjct: 260 YSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGE 319

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ P VV++  +M+ L + G +++ + LL  M +  + PN  +YN+++D  C    
Sbjct: 320 MEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRS 379

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            ++A  +   M + GC  +  ++S LI+G C+   ++ A  L  E     + P++  Y +
Sbjct: 380 ASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTS 439

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G     +V  A  L  EM   G   D   +   I GL   G + EA+ +   +   +
Sbjct: 440 LIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQ 499

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   YN LI GLCK   L  A  L   +    +  D   Y  +I     +  +D+AR
Sbjct: 500 LLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEAR 559

Query: 361 DLFLDMEAK 369
            +F  ME K
Sbjct: 560 KIFEFMEQK 568



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 24/279 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G  P+V  YN +I G C+ G    A+     M     + G +  P+  
Sbjct: 557 EARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMR----KVGRI--PDEF 610

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I G  K+G +  A  L   M      PNVV Y+SLI+G+C   D + A+CLF  M
Sbjct: 611 TYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSM 670

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC--LTG 179
             QG+ PNV+++ +++  L K  K+  A+   E M+     PN +  ++L+ G C  +  
Sbjct: 671 ESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMAS 730

Query: 180 RVNRAEELFVSMESMGCKHNVF-------------SYSILINGYCKNKEIEGALSLYSEM 226
            ++      V++   G   ++F             +Y+ +I   C +  +  AL L ++M
Sbjct: 731 IISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKM 790

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFK--LFDEMQR 263
            +KG KPD   + +L  G   + +  R ++  L +E QR
Sbjct: 791 ANKGYKPDSATFLSLLYGFCSVGK-SREWRTILPNEFQR 828



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 21/133 (15%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVA---------------LNLFEEM 45
           + AA  F  + +  C PN +T ++L+ GLC +  +I++               L++F  +
Sbjct: 696 VRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGALLDIFRAL 755

Query: 46  ANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
            N        C P    Y  II  LC    + +A +L  KM ++   P+  T+ SL++GF
Sbjct: 756 VNDR------CDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGF 809

Query: 106 CYANDWNEAKCLF 118
           C      E + + 
Sbjct: 810 CSVGKSREWRTIL 822


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/339 (35%), Positives = 177/339 (52%), Gaps = 6/339 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV TY  LI    R+     A  LF+EM     E      P+   YT+II+  CK G + 
Sbjct: 257 NVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE------PDVYIYTSIINWNCKFGNMK 310

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  LF +M +  + PN  TY +LI+G C A +   A+ +  +M  +GV  N V FN +M
Sbjct: 311 RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 370

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK G +DEA RL  +M Q G   +AF  N +  GFC + R   A+ L ++ME  G  
Sbjct: 371 DGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 430

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            NV S+SILI+ YCK +    A  L+  M  KG  P VV YN       +  ++E A+KL
Sbjct: 431 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 490

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            +EMQ  G+  DT+ Y + IDG   +G +  A+ELF  +  L    ++  Y  +I GL K
Sbjct: 491 INEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSK 550

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            GR   A++L+  + +  ++ D   Y+ +I +L   G +
Sbjct: 551 DGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVGPL 589



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 188/369 (50%), Gaps = 12/369 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCR---TGHTIVALNLFEEMANGNGEFGVVCK 57
           + A AL  +L   G +P+V TYNTL+NG       G     L+L E+          V  
Sbjct: 205 VRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKN---------VVD 255

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            N  TYT +I+   +   +++A++LF +M  + I P+V  Y S+I+  C   +   A  L
Sbjct: 256 YNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVL 315

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM ++ + PN  ++  ++N  CK G+M  A  ++  M   GV  N  ++NTLMDG+C 
Sbjct: 316 FDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCK 375

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G ++ A  L   M+  G + + F+ +I+ +G+C++   E A  L   M  +G+ P+VV 
Sbjct: 376 KGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVS 435

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           ++ L     +      A +LF  M++ G A     Y  FI+  CK G + EA +L   ++
Sbjct: 436 FSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQ 495

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D   Y  LIDG   SG +  A ELF  +P+  L  +VVTY ++I  L  DG+ D
Sbjct: 496 ERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRAD 555

Query: 358 KARDLFLDM 366
           +A  L+ +M
Sbjct: 556 EAFKLYDEM 564



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 149/275 (54%), Gaps = 6/275 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN +TY  LING C+ G    A    E M N     GV    N V + T++DG CK+G +
Sbjct: 326 PNAYTYGALINGACKAGEMKAA----EMMVNDMQSKGVDV--NRVIFNTLMDGYCKKGMI 379

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L   M+ +    +  T N +  GFC +N   EAK L + M ++GV PNVVSF+++
Sbjct: 380 DEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSIL 439

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK     EA RL ++M + G  P+   YN  ++ +C  G++  A +L   M+  G 
Sbjct: 440 IDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGL 499

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             + ++Y+ LI+G   +  ++ AL L++EM   G+  +VV Y  +  GL +  + + AFK
Sbjct: 500 MPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFK 559

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           L+DEM + G+  D   Y + I  L K G +V  +E
Sbjct: 560 LYDEMNKEGIVPDDGIYSSLIASLHKVGPLVSGLE 594



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 177/374 (47%), Gaps = 41/374 (10%)

Query: 28  GLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
            L R+G+  + +    +M +   E  V       ++T ++DGLCK+G V +AK L  ++ 
Sbjct: 162 ALKRSGNMELCVEFLRQMVDSGIEIRVC------SWTAVVDGLCKKGEVVRAKALMDELV 215

Query: 88  DENINPNVVTYNSLIHGFCYAND----------------------------W-------N 112
            +   P+V+TYN+L++G+    D                            W        
Sbjct: 216 CKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIE 275

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           EA+ LF EM+ +G++P+V  +  I+N  CK G M  A  L + M +  + PNA+ Y  L+
Sbjct: 276 EAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALI 335

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           +G C  G +  AE +   M+S G   N   ++ L++GYCK   I+ AL L + M  KG +
Sbjct: 336 NGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFE 395

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            D    N +  G    ++ E A +L   M+  GVA +  ++   ID  CK     EA  L
Sbjct: 396 IDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRL 455

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F+ +        +  YN  I+  CK G+++ A++L   +    L+ D  TY  +I    A
Sbjct: 456 FKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERA 515

Query: 353 DGKMDKARDLFLDM 366
            G +D+A +LF +M
Sbjct: 516 SGNVDRALELFNEM 529



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 71/165 (43%)

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +L   Y  N+  + +L ++     KG + D        + L     +E   +   +M   
Sbjct: 123 MLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDS 182

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+     ++   +DGLCK G +V A  L   L    ++  +  YN L++G  +   +   
Sbjct: 183 GIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGV 242

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            E+   + + V+  +V TY ++I       K+++A  LF +M  K
Sbjct: 243 NEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKK 287


>gi|357499665|ref|XP_003620121.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495136|gb|AES76339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 408

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 111/333 (33%), Positives = 179/333 (53%), Gaps = 45/333 (13%)

Query: 3   AAALFMKLRVFGCEPNVFTYN---------------------TLINGLCRTGHTIVALNL 41
           A +   KL   G +P++FTYN                     TLINGLC+ G T  AL L
Sbjct: 82  ALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFLDRVSYETLINGLCKVGETRAALRL 141

Query: 42  FEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
            +E+     ++ VV       YT II+GLCK+  VD A +L+ +M  + ++P+V TYN++
Sbjct: 142 LKEVNEKIVQYDVV------MYTAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAM 195

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           I+GFC      +A  LF +M  + V+ +  +FN +++  CK G + E   ++ +M++ GV
Sbjct: 196 IYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGV 255

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSM---------------ESMGCKH---NVFSY 203
           +P+   YN+LMDG+CL   V++A+ +F +M               + M CK    +  +Y
Sbjct: 256 KPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAY 315

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S LI+G+CK+  I  AL L  EM  +G  P+++ YN++   L +IH VE+   L  +++ 
Sbjct: 316 SSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKV 375

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            G+  D + Y    +GL K+G + EA E+F  L
Sbjct: 376 KGIQPDAYTYTILTNGLFKDGRLEEAREIFPDL 408



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 185/371 (49%), Gaps = 44/371 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG-- 74
           P +  +  ++  L  +    +AL+  +++      F  + KP+  TY  +I+   + G  
Sbjct: 61  PPISQFGRILASLALSNRYSIALSFHQKL-----HFKGI-KPDLFTYNVLINCFSQLGHT 114

Query: 75  -FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            F+D+                 V+Y +LI+G C   +   A  L  E+ ++ VQ +VV +
Sbjct: 115 HFLDR-----------------VSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMY 157

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             I+N LCK+  +D+A  L   M+   V P+ F YN ++ GFC+ GR+  A  LF  M+ 
Sbjct: 158 TAIINGLCKDKLVDDAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKL 217

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              + + ++++ L++ +CK   +    ++ + M+ +G+KPD++ YN+L  G   + +V++
Sbjct: 218 ENVEADEYTFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDK 277

Query: 254 AFKLFDEMQRHGVAA------------------DTWAYRTFIDGLCKNGYIVEAVELFRT 295
           A  +F+ M + GV A                  DT AY + IDG CK+G I +A+EL   
Sbjct: 278 AKNIFNTMVQRGVTANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDE 337

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +       +I  YN ++  LCK   ++    L R +    +  D  TY I+ + L  DG+
Sbjct: 338 MHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGR 397

Query: 356 MDKARDLFLDM 366
           +++AR++F D+
Sbjct: 398 LEEAREIFPDL 408



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 134/260 (51%), Gaps = 23/260 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++      P+VFTYN +I G C  G    A+ LF +M   N E       +  
Sbjct: 172 DAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVE------ADEY 225

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T++   CKEG V + K +   M  E + P+++TYNSL+ G+C   + ++AK +F  M
Sbjct: 226 TFNTLVSAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTM 285

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV  NV + N+     CK                  + P+   Y++L+DGFC +GR+
Sbjct: 286 VQRGVTANVRTMNLFQEMHCKE-----------------IIPDTIAYSSLIDGFCKSGRI 328

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A EL   M   G   N+ +Y+ ++   CK   +E  ++L  ++  KGI+PD   Y  L
Sbjct: 329 PQALELVDEMHDRGQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTIL 388

Query: 242 FIGLFEIHQVERAFKLFDEM 261
             GLF+  ++E A ++F ++
Sbjct: 389 TNGLFKDGRLEEAREIFPDL 408



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 158/350 (45%), Gaps = 38/350 (10%)

Query: 39  LNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           + LF E   N    F     P+T+ YT   +    E  + +    F ++ ++   P +  
Sbjct: 11  IPLFNETNPNFIHSFRFSSSPSTI-YTQFNNNPHHENLISR----FNRLTNQIPTPPISQ 65

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +  ++     +N ++ A     ++  +G++P++ ++NV++N   + G      R+     
Sbjct: 66  FGRILASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFLDRV----- 120

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                     Y TL++G C  G    A  L   +     +++V  Y+ +ING CK+K ++
Sbjct: 121 ---------SYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVD 171

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  LY+EM++K + PDV  YN +  G   + +++ A  LF++M+   V AD + + T +
Sbjct: 172 DAFDLYTEMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLV 231

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGV- 335
              CK G + E   +   +     + DI  YN L+DG C    +  A  +F ++  RGV 
Sbjct: 232 SAFCKEGNVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVT 291

Query: 336 ----------------LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                           +I D + Y+ +I   C  G++ +A +L  +M  +
Sbjct: 292 ANVRTMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDR 341


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 192/392 (48%), Gaps = 44/392 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNV  Y TLI    +      A+ + +EM     E G+   P+   Y ++I GL K 
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIFCYNSLIIGLSKA 500

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A+   ++M +  + PN  TY + I G+  A+++  A     EM + GV PN V  
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++NE CK GK+ EA      M+  G+  +A  Y  LM+G     +V+ AEE+F  M  
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +VFSY +LING+ K   ++ A S++ EM+ +G+ P+V+IYN L  G     ++E+
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L DEM   G+  +   Y T IDG CK+G + EA  LF  +++     D   Y  L+D
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740

Query: 314 GLCKSGRLKIAWELF---------RSLPRGVLI--------------------------- 337
           G C+   ++ A  +F          + P   LI                           
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800

Query: 338 --ADVVTYNIMIHALCADGKMDKARDLFLDME 367
              + VTYNIMI  LC +G ++ A++LF  M+
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 190/407 (46%), Gaps = 46/407 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +  +++   G +PN FTY   I+G         A    +EM     E GV+  PN V
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKV 558

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T +I+  CK+G V +A   +  M D+ I  +  TY  L++G    +  ++A+ +F EM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+V S+ V++N   K G M +AS + + M++ G+ PN  +YN L+ GFC +G +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   M   G   N  +Y  +I+GYCK+ ++  A  L+ EM  KG+ PD  +Y TL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT--------W---------------------- 271
             G   ++ VERA  +F    + G A+ T        W                      
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797

Query: 272 ---------AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
                     Y   ID LCK G +  A ELF  ++       +  Y  L++G  K GR  
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + +F       +  D + Y+++I+A   +G   KA  L   M AK
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 187/397 (47%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           +A +L +++   G   +  TY+ LI+GL +  +   A  L  EM +              
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 50  ---GEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
               + GV+ K              P    Y ++I+G C+E  V +  EL ++MK  NI 
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            +  TY +++ G C + D + A  +  EM+  G +PNVV +  ++    +N +  +A R+
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M + G+ P+ F YN+L+ G     R++ A    V M   G K N F+Y   I+GY +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E   A     EM   G+ P+ V+   L     +  +V  A   +  M   G+  D   
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   ++GL KN  + +A E+FR +R      D+ +Y  LI+G  K G ++ A  +F  + 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              L  +V+ YN+++   C  G+++KA++L  +M  K
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 173/388 (44%), Gaps = 41/388 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL--- 70
           G  P  +TY+ LI+GLC+      A +L  EM +     GV    +  TY+ +IDGL   
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS----LGVSL--DNHTYSLLIDGLLKG 325

Query: 71  --------------------------------CKEGFVDKAKELFLKMKDENINPNVVTY 98
                                            KEG ++KAK LF  M    + P    Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
            SLI G+C   +  +   L +EM  + +  +  ++  ++  +C +G +D A  +++ MI 
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G RPN  +Y TL+  F    R   A  +   M+  G   ++F Y+ LI G  K K ++ 
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A S   EM+  G+KP+   Y     G  E  +   A K   EM+  GV  +       I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
             CK G ++EA   +R++       D + Y  L++GL K+ ++  A E+FR +    +  
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           DV +Y ++I+     G M KA  +F +M
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEM 653



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 177/395 (44%), Gaps = 51/395 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA + +  +   G   +  TY  L+NGL +      A  +F EM  G G       P+ 
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKG-----IAPDV 627

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  +I+G  K G + KA  +F +M +E + PNV+ YN L+ GFC + +  +AK L  E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN V++  I++  CK+G + EA RL + M   G+ P++FVY TL+DG C    
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 181 VNRAEELFVSMESMGC---------------------------------------KHNVF 201
           V RA  +F      GC                                       K N  
Sbjct: 748 VERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+I+  CK   +E A  L+ +M +  + P V+ Y +L  G  ++ +    F +FDE 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY-----ELDIRAYNCLIDGLC 316
              G+  D   Y   I+   K G   +A+ L   +          +L I     L+ G  
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           K G +++A ++  ++ R   I D  T   +I+  C
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 183/402 (45%), Gaps = 50/402 (12%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLF--------EEMANGNGEF----GVVCK---PNTVT 62
           +V TY+ LI   CR G+  +  ++             N +G       ++CK   P   T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +IDGLCK   ++ AK L ++M    ++ +  TY+ LI G     + + AK L  EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+      ++  +  + K G M++A  L + MI  G+ P A  Y +L++G+C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +  EL V M+      + ++Y  ++ G C + +++GA ++  EM++ G +P+VVIY TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------NGYIVEAVELFRT 295
               +  +   A ++  EM+  G+A D + Y + I GL K         ++VE VE    
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 296 LRILKYELDIRAY----------------------------NCLIDGLCKSGRLKIAWEL 327
                Y   I  Y                              LI+  CK G++  A   
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +RS+    ++ D  TY ++++ L  + K+D A ++F +M  K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/321 (24%), Positives = 142/321 (44%), Gaps = 14/321 (4%)

Query: 49  NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 108
           +   G+   P       ++D L +   +D   +++  M + N+  +V TY+ LI   C A
Sbjct: 175 SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRA 234

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
            +    K +  +   +       + NV           D A +L E MI  G+ P  + Y
Sbjct: 235 GNVQLGKDVLFKTEKEF---RTATLNV-----------DGALKLKESMICKGLVPLKYTY 280

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + L+DG C   R+  A+ L V M+S+G   +  +YS+LI+G  K +  + A  L  EM+S
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            GI     +Y+     + +   +E+A  LFD M   G+     AY + I+G C+   + +
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
             EL   ++     +    Y  ++ G+C SG L  A+ + + +       +VV Y  +I 
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460

Query: 349 ALCADGKMDKARDLFLDMEAK 369
               + +   A  +  +M+ +
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQ 481



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 39/256 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           EA  LF ++++ G  P+ F Y TL++G CR      A+ +F     G             
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774

Query: 49  -------------------NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
                              +G F    KPN VTY  +ID LCKEG ++ AKELF +M++ 
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N+ P V+TY SL++G+       E   +F E +  G++P+ + ++VI+N   K G   +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 150 SRLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             L++ M     +  G + +      L+ GF   G +  AE++  +M  +    +  +  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 205 ILINGYC--KNKEIEG 218
            LIN  C   N+ +E 
Sbjct: 955 ELINESCISSNQRVEA 970



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 141/354 (39%), Gaps = 36/354 (10%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E  + +++ L   LC  G    AL++ E M   N        P    +++I+   C + F
Sbjct: 94  EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-------PVAEVWSSIVR--CSQEF 144

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V K+ +  L             +  L  G+       EA  +F   M   + P +    V
Sbjct: 145 VGKSDDGVL-------------FGILFDGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKV 191

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L +  ++D    + + M++  V  +   Y+ L+   C  G V   +++    E   
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE- 250

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
                F  + L         ++GAL L   M+ KG+ P    Y+ L  GL +I ++E A 
Sbjct: 251 -----FRTATL--------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  EM   GV+ D   Y   IDGL K      A  L   +      +    Y+C I  +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K G ++ A  LF  +    LI     Y  +I   C +  + +  +L ++M+ +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 192/368 (52%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA +   +      P+ +TYN +I+G C+ G    A+ L EEM N      +   P+ V
Sbjct: 285 EAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMEN------LKLSPDVV 338

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+G  + G  ++  +L  +M+   + PN VTYN ++  F      +E      +M
Sbjct: 339 TYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKM 398

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P++V++N +++  CK GKMDEA RL++ M + G++ +    NT++   C   ++
Sbjct: 399 EESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKL 458

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L  S    G   +  SY  LI GY K+++   AL L+ EM  K I P ++ YN++
Sbjct: 459 DEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSM 518

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++ +  +A    DE+   G+  D   Y T I G C+ G + +A +    +    +
Sbjct: 519 IAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNF 578

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+   N L+ GLCK G L+ A +LF +        D V+YN +I +LC + +  +A D
Sbjct: 579 KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFD 638

Query: 362 LFLDMEAK 369
           L  +ME K
Sbjct: 639 LLEEMEEK 646



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 191/358 (53%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+R +GC P+  TYNT+++GLC+ G    A +L  +M N  G F     PN  
Sbjct: 215 EAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKN-KGLF-----PNRT 268

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ G C+ G++ +A  +   M   ++ P+  TYN +I GFC      EA  L  EM
Sbjct: 269 TFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEM 328

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +  + P+VV++N ++N   ++G  +E  +L+E M   G++PN+  YN ++  F   G++
Sbjct: 329 ENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKM 388

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  ++    ME  GC  ++ +Y+ LI+ +CK  +++ A  L  EM  KG+K D V  NT+
Sbjct: 389 DEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTM 448

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    +++ A  L    +R G   D  +Y T I G  K+    +A+ L+  ++  + 
Sbjct: 449 LRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEI 508

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              I  YN +I GLC+ G+   A +    L    L+ D +TYN +IH  C +G+++KA
Sbjct: 509 IPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKA 566



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/393 (31%), Positives = 199/393 (50%), Gaps = 34/393 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCR--TGHTI----------------VALNLFE 43
           +AA +F +++  G +P + T NTL+N L R  + H+I                +  N F 
Sbjct: 142 QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFN 201

Query: 44  EMANGN---GEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
            + +G+     FG             C P+ +TY TI+DGLCK+G +++A++L L MK++
Sbjct: 202 ILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNK 261

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDE 148
            + PN  T+N L+ G C    W +     IE+M Q  V P+  ++NV+++  CK G++ E
Sbjct: 262 GLFPNRTTFNILVVGCCRLG-WLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAE 320

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A RL E M  + + P+   YNTL++G    G      +L   ME  G K N  +Y++++ 
Sbjct: 321 AMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVK 380

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            + K  +++       +M   G  PD+V YNTL     ++ +++ AF+L DEM R G+  
Sbjct: 381 WFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKM 440

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           D     T +  LC+   + EA +L  + R   Y +D  +Y  LI G  K  +   A  L+
Sbjct: 441 DDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLW 500

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +    +I  ++TYN MI  LC  GK ++A D
Sbjct: 501 DEMKEKEIIPSIITYNSMIAGLCQMGKTNQAID 533



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 171/365 (46%), Gaps = 41/365 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++      P+V TYNTLING    G +     L EEM       G   KPN+V
Sbjct: 320 EAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME------GRGMKPNSV 373

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++    K+G +D+  +   KM++    P++VTYN+LI   C     +EA  L  EM
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEAS------------------------------- 150
             +G++ + V+ N ++  LC+  K+DEA                                
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKA 493

Query: 151 ----RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
               RL + M +  + P+   YN+++ G C  G+ N+A +    +   G   +  +Y+ +
Sbjct: 494 SQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTI 553

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+GYC+  ++E A   +++M+ K  KPDVV  NTL  GL +   +E+A KLF+     G 
Sbjct: 554 IHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGK 613

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D  +Y T I  LCK     EA +L   +   K   D   YN ++ GL  +GR+K A E
Sbjct: 614 DVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEE 673

Query: 327 LFRSL 331
               +
Sbjct: 674 FISKI 678



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 29/299 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEF 52
           E      K+   GC P++ TYNTLI+  C+ G    A  L +EM            N   
Sbjct: 390 EVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTML 449

Query: 53  GVVCKP--------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
             +C+                     + V+Y T+I G  K     +A  L+ +MK++ I 
Sbjct: 450 RALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEII 509

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+++TYNS+I G C     N+A     E+++ G+ P+ +++N I++  C+ G++++A + 
Sbjct: 510 PSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQF 569

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M++   +P+    NTL+ G C  G + +A +LF +  S G   +  SY+ +I   CK
Sbjct: 570 HNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCK 629

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            K    A  L  EM  K + PD   YN +  GL +  +++ A +   ++   G + + +
Sbjct: 630 EKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQF 688



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 6/154 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYNT+I+G C+ G    A     +M   N       KP+ VT  T++ GLCKE
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN------FKPDVVTCNTLLCGLCKE 595

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++KA +LF     +  + + V+YN++I   C    + EA  L  EM ++ + P+  ++
Sbjct: 596 GMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTY 655

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           N I+  L   G+M +A   +  + + G   N F+
Sbjct: 656 NAILGGLTDAGRMKDAEEFISKIAEKGKSENQFL 689



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 29/153 (18%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V T NTL+ GLC+ G    AL LF    +   +       + V+Y TII  LCKE  
Sbjct: 579 KPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDV------DAVSYNTIILSLCKEKR 632

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG---------- 125
             +A +L  +M+++ + P+  TYN+++ G   A    +A+    ++ ++G          
Sbjct: 633 FGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQFLELG 692

Query: 126 -------------VQPNVVSFNVIMNELCKNGK 145
                          PN ++++  +NELC  G+
Sbjct: 693 KRQDARTSEIPQEPHPNAIAYSNKINELCSQGR 725


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/392 (31%), Positives = 192/392 (48%), Gaps = 44/392 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNV  Y TLI    +      A+ + +EM     E G+   P+   Y ++I GL K 
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIFCYNSLIIGLSKA 500

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A+   ++M +  + PN  TY + I G+  A+++  A     EM + GV PN V  
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++NE CK GK+ EA      M+  G+  +A  Y  LM+G     +V+ AEE+F  M  
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +VFSY +LING+ K   ++ A S++ EM+ +G+ P+V+IYN L  G     ++E+
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L DEM   G+  +   Y T IDG CK+G + EA  LF  +++     D   Y  L+D
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740

Query: 314 GLCKSGRLKIAWELF---------RSLPRGVLI--------------------------- 337
           G C+   ++ A  +F          + P   LI                           
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800

Query: 338 --ADVVTYNIMIHALCADGKMDKARDLFLDME 367
              + VTYNIMI  LC +G ++ A++LF  M+
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 190/407 (46%), Gaps = 46/407 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +  +++   G +PN FTY   I+G         A    +EM     E GV+  PN V
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKV 558

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T +I+  CK+G V +A   +  M D+ I  +  TY  L++G    +  ++A+ +F EM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+V S+ V++N   K G M +AS + + M++ G+ PN  +YN L+ GFC +G +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   M   G   N  +Y  +I+GYCK+ ++  A  L+ EM  KG+ PD  +Y TL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT--------W---------------------- 271
             G   ++ VERA  +F    + G A+ T        W                      
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797

Query: 272 ---------AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
                     Y   ID LCK G +  A ELF  ++       +  Y  L++G  K GR  
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + +F       +  D + Y+++I+A   +G   KA  L   M AK
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 187/397 (47%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           +A +L +++   G   +  TY+ LI+GL +  +   A  L  EM +              
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 50  ---GEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
               + GV+ K              P    Y ++I+G C+E  V +  EL ++MK  NI 
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            +  TY +++ G C + D + A  +  EM+  G +PNVV +  ++    +N +  +A R+
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M + G+ P+ F YN+L+ G     R++ A    V M   G K N F+Y   I+GY +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E   A     EM   G+ P+ V+   L     +  +V  A   +  M   G+  D   
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   ++GL KN  + +A E+FR +R      D+ +Y  LI+G  K G ++ A  +F  + 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              L  +V+ YN+++   C  G+++KA++L  +M  K
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 173/388 (44%), Gaps = 41/388 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL--- 70
           G  P  +TY+ LI+GLC+      A +L  EM +     GV    +  TY+ +IDGL   
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS----LGVSL--DNHTYSLLIDGLLKG 325

Query: 71  --------------------------------CKEGFVDKAKELFLKMKDENINPNVVTY 98
                                            KEG ++KAK LF  M    + P    Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
            SLI G+C   +  +   L +EM  + +  +  ++  ++  +C +G +D A  +++ MI 
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G RPN  +Y TL+  F    R   A  +   M+  G   ++F Y+ LI G  K K ++ 
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A S   EM+  G+KP+   Y     G  E  +   A K   EM+  GV  +       I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
             CK G ++EA   +R++       D + Y  L++GL K+ ++  A E+FR +    +  
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           DV +Y ++I+     G M KA  +F +M
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEM 653



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 177/395 (44%), Gaps = 51/395 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA + +  +   G   +  TY  L+NGL +      A  +F EM  G G       P+ 
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKG-----IAPDV 627

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  +I+G  K G + KA  +F +M +E + PNV+ YN L+ GFC + +  +AK L  E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN V++  I++  CK+G + EA RL + M   G+ P++FVY TL+DG C    
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 181 VNRAEELFVSMESMGC---------------------------------------KHNVF 201
           V RA  +F      GC                                       K N  
Sbjct: 748 VERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+I+  CK   +E A  L+ +M +  + P V+ Y +L  G  ++ +    F +FDE 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY-----ELDIRAYNCLIDGLC 316
              G+  D   Y   I+   K G   +A+ L   +          +L I     L+ G  
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           K G +++A ++  ++ R   I D  T   +I+  C
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/402 (26%), Positives = 183/402 (45%), Gaps = 50/402 (12%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLF--------EEMANGNGEF----GVVCK---PNTVT 62
           +V TY+ LI   CR G+  +  ++             N +G       ++CK   P   T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +IDGLCK   ++ AK L ++M    ++ +  TY+ LI G     + + AK L  EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+      ++  +  + K G M++A  L + MI  G+ P A  Y +L++G+C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +  EL V M+      + ++Y  ++ G C + +++GA ++  EM++ G +P+VVIY TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------NGYIVEAVELFRT 295
               +  +   A ++  EM+  G+A D + Y + I GL K         ++VE VE    
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 296 LRILKYELDIRAY----------------------------NCLIDGLCKSGRLKIAWEL 327
                Y   I  Y                              LI+  CK G++  A   
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +RS+    ++ D  TY ++++ L  + K+D A ++F +M  K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 152/348 (43%), Gaps = 20/348 (5%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           +  L +G    G+   A+ +F      +   G+   P       ++D L +   +D   +
Sbjct: 154 FGILFDGYIAKGYIEEAVFVF------SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           ++  M + N+  +V TY+ LI   C A +    K +  +   +       + NV      
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF---RTATLNV------ 258

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
                D A +L E MI  G+ P  + Y+ L+DG C   R+  A+ L V M+S+G   +  
Sbjct: 259 -----DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +YS+LI+G  K +  + A  L  EM+S GI     +Y+     + +   +E+A  LFD M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              G+     AY + I+G C+   + +  EL   ++     +    Y  ++ G+C SG L
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             A+ + + +       +VV Y  +I     + +   A  +  +M+ +
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 39/256 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           EA  LF ++++ G  P+ F Y TL++G CR      A+ +F     G             
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774

Query: 49  -------------------NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
                              +G F    KPN VTY  +ID LCKEG ++ AKELF +M++ 
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N+ P V+TY SL++G+       E   +F E +  G++P+ + ++VI+N   K G   +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 150 SRLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             L++ M     +  G + +      L+ GF   G +  AE++  +M  +    +  +  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 205 ILINGYC--KNKEIEG 218
            LIN  C   N+ +E 
Sbjct: 955 ELINESCISSNQRVEA 970



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 141/354 (39%), Gaps = 36/354 (10%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E  + +++ L   LC  G    AL++ E M   N        P    +++I+   C + F
Sbjct: 94  EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-------PVAEVWSSIVR--CSQEF 144

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V K+ +  L             +  L  G+       EA  +F   M   + P +    V
Sbjct: 145 VGKSDDGVL-------------FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKV 191

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L +  ++D    + + M++  V  +   Y+ L+   C  G V   +++    E   
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE- 250

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
                F  + L         ++GAL L   M+ KG+ P    Y+ L  GL +I ++E A 
Sbjct: 251 -----FRTATL--------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  EM   GV+ D   Y   IDGL K      A  L   +      +    Y+C I  +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K G ++ A  LF  +    LI     Y  +I   C +  + +  +L ++M+ +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  199 bits (507), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 206/429 (48%), Gaps = 65/429 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------ 56
           AA ++ ++R+ G  P+ FT   +    CR G    A+   EEM     E  +V       
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 57  -----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NIN 92
                                   PN VTYT ++ G CK+G +++A+ +  +MK+  +I 
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            + V Y  +I+G+C     ++A  +  EM D G+  N+  +N ++N LCK G+M+E  ++
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M  +G+RP+ + YNTL+DG+C  G + +A E+   M   G      +Y+ L+ G+C 
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ AL L+  ML +G+ P+ +  +TL  GLF+  + E+A  L+ E    G+A +   
Sbjct: 442 LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVIT 501

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW------- 325
           + T I+GLCK G + EA EL   ++ L+   D   Y  L DG CK G+L  A        
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 326 --------ELFRSLPRGVLIA--------------------DVVTYNIMIHALCADGKMD 357
                   E+F S   G  IA                    ++VTY  +I   C +G + 
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 358 KARDLFLDM 366
           +A +L+ +M
Sbjct: 622 EACNLYFEM 630



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 203/429 (47%), Gaps = 67/429 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ +    G   NV T+NT+INGLC+ G    A  L + M        + C P+++
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE------LRCPPDSL 535

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKD--------------------------------- 88
           TY T+ DG CK G +  A  L  KM+                                  
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595

Query: 89  --ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
               ++PN+VTY +LI G+C   + +EA  L+ EM++ G+ PNV   + +M+   K GK+
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 147 DEASRLLELMIQIGVRPNAFV--------------------------YNTLMDGFCLTGR 180
           DEA+ +L+ ++ I + P   +                          +N ++ G C +GR
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A+ LF S+ +     + F+YS LI+G   +  I+ A SL   MLS G+ P+++ YN+
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  ++ RA  LF+++Q  G++ +   Y T ID  CK G   EA +L + +    
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +  +  Y+ LI GLC  G ++ A +L   +    +  + +TY  +IH     G M++  
Sbjct: 836 IQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 895

Query: 361 DLFLDMEAK 369
            L+ +M  +
Sbjct: 896 KLYDEMHIR 904



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 209/464 (45%), Gaps = 102/464 (21%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++R  G   N+F YNT+INGLC+ G       + +EM +      V  +P+  
Sbjct: 342 DATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED------VGMRPDKY 395

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+IDG C+EG + KA E+   M    +    +TYN+L+ GFC  +  ++A  L+  M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 122 MDQGVQPN-----------------------------------VVSFNVIMNELCKNGKM 146
           + +GV PN                                   V++FN ++N LCK G+M
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG----------- 195
            EA  LL+ M ++   P++  Y TL DG+C  G++  A  L   ME +G           
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575

Query: 196 ------------------------CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
                                      N+ +Y  LI G+CK   +  A +LY EM++ G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635

Query: 232 KPDVVIYNTLFIGLFEIHQVERA----FKLFD------------EMQRHGVAADTWA--- 272
            P+V I + L    ++  +V+ A     KL +            E+ +     DT A   
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695

Query: 273 -------YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
                  +   I GLCK+G I +A  LF +LR  ++  D   Y+ LI G   SG +  A+
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L   +    L  +++TYN +I+ LC  GK+ +A +LF  +++K
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSK 799



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 201/376 (53%), Gaps = 19/376 (5%)

Query: 2   EAAALFMKLRVF------GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 55
           +A  L   L VF      GC P++ + N L+N L ++G   +A  ++ +M       GV+
Sbjct: 160 DAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIA----GVL 215

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
             P+  T   +    C++G V +A E   +M+   +  N+V Y++++  +C      +A+
Sbjct: 216 --PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDAR 273

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDG 174
            +   +  +G+ PNVV++ +++   CK+G+M+EA R+++ M + G +  +   Y  +++G
Sbjct: 274 RILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +C  GR++ A  +   M   G   N+F Y+ +ING CK   +E    +  EM   G++PD
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
              YNTL  G      + +AF++   M R+G+AA T  Y T + G C    I +A+ L+ 
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW- 452

Query: 295 TLRILKYELDIRAYNC--LIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALC 351
              +LK  +     +C  L+DGL K+G+ + A  L++ +L RG L  +V+T+N +I+ LC
Sbjct: 453 -FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG-LAKNVITFNTVINGLC 510

Query: 352 ADGKMDKARDLFLDME 367
             G+M +A +L   M+
Sbjct: 511 KIGRMAEAEELLDRMK 526



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 181/375 (48%), Gaps = 17/375 (4%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTG--HTIVAL---------NLFEEMANGNGEF 52
           AAL +  R+    P++ ++  L++ L R    H   AL          LF  +A    +F
Sbjct: 86  AALHL-FRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDF 144

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
                 + V++  ++      G +  A  +F  M      P++ + N L++    + D  
Sbjct: 145 TF----SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPG 200

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
            A  ++ +M   GV P+  +  ++    C++G++ +A   +E M  +G+  N   Y+ +M
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-I 231
           D +C  G    A  +  S++  G   NV +Y++L+ GYCK+  +E A  +  EM   G I
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             D V Y  +  G  +  +++ A ++ +EM+  G+  + + Y T I+GLCK G + E  +
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           + + +  +    D  +YN LIDG C+ G ++ A+E+ R + R  L A  +TYN ++   C
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440

Query: 352 ADGKMDKARDLFLDM 366
           +   +D A  L+  M
Sbjct: 441 SLHAIDDALRLWFLM 455



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 113/211 (53%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V +  II GLCK G +  AK LF  ++++   P+  TY+SLIHG   +   +EA  L   
Sbjct: 701 VMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDV 760

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ PN++++N ++  LCK+GK+  A  L   +   G+ PN   YNTL+D +C  G+
Sbjct: 761 MLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGK 820

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A +L   M   G +  V +YSILI G C    +E A+ L  +M+   + P+ + Y T
Sbjct: 821 TTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCT 880

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           L  G  +   +E   KL+DEM   G+    W
Sbjct: 881 LIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 911



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 117/218 (53%), Gaps = 6/218 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           +N +I GLC++G    A +LFE + N          P+  TY+++I G    G +D+A  
Sbjct: 703 WNVIIFGLCKSGRIADAKSLFESLRNKR------FLPDNFTYSSLIHGCAASGSIDEAFS 756

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           L   M    + PN++TYNSLI+G C +   + A  LF ++  +G+ PN +++N +++E C
Sbjct: 757 LRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYC 816

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K GK  EA +L + M++ G++P    Y+ L+ G C  G +  A +L   M       N  
Sbjct: 817 KEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYI 876

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +Y  LI+GY K+  +E    LY EM  +G+ P   I N
Sbjct: 877 TYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 90/156 (57%), Gaps = 6/156 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+ TYN+LI GLC++G    A+NLF ++ +          PN +TY T+ID  CKE
Sbjct: 765 GLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKG------ISPNGITYNTLIDEYCKE 818

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A +L  KM +E I P V+TY+ LI+G C      EA  L  +M++  V PN +++
Sbjct: 819 GKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITY 878

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
             +++   K+G M+E S+L + M   G+ P  ++ N
Sbjct: 879 CTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGN 914



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 83/169 (49%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +  S+ +L+  +    ++  AL+++  M   G +P +   N L   L +      A  ++
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            +M+  GV  D +         C++G + +AVE    +  +  E+++ AY+ ++D  C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G  + A  +  SL R  L  +VVTY +++   C DG+M++A  +  +M+
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 6/112 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G +P V TY+ LI GLC  G+   A+ L ++M   N        PN +
Sbjct: 823 EAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENN------VDPNYI 876

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
           TY T+I G  K G +++  +L+ +M    + P     N         N+WN 
Sbjct: 877 TYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVVVNNWNR 928


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF +    G  P++ T + LIN  C   H   A ++F  +            PN +T  
Sbjct: 82  SLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANILKRGYH------PNAITLN 135

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC  G + +A     K+  +    + V+Y +LI+G C A +      L  ++   
Sbjct: 136 TLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGH 195

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            V+P++V +  I++ LCKN  + +A  L   MI  G+ PN F Y TL+ GFC+ G +  A
Sbjct: 196 SVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEA 255

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M+      +V++++ILI+   K  +I+ A+SL+ EM  K + P++V Y +L  G
Sbjct: 256 FSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDG 315

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L + H +ERA  L  +M+  G+  + ++Y   +D LCK G +  A + F+ L +  Y L+
Sbjct: 316 LCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLN 375

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +R YN +I+GLCK+G      +L   +     + + +T+  +I AL    + DKA     
Sbjct: 376 VRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLR 435

Query: 365 DMEAK 369
           +M A+
Sbjct: 436 EMIAR 440



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 154/312 (49%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P T  +  I+  L K         LF + +   I P++ T + LI+ FC+      A  +
Sbjct: 59  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  ++ +G  PN ++ N ++  LC  G++  A    + ++  G + +   Y TL++G C 
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCK 178

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G       L   +E    K ++  Y+ +I+  CKNK +  A  LYSEM+ KGI P+V  
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G   +  ++ AF L +EM+   +  D + +   ID L K G I EA+ LF  ++
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +I  Y  LIDGLCK+  L+ A  L + +    +  +V +Y I++ ALC  G+++
Sbjct: 299 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLE 358

Query: 358 KARDLFLDMEAK 369
            A+  F  +  K
Sbjct: 359 NAKQFFQHLLVK 370



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 148/307 (48%), Gaps = 29/307 (9%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE---------------MAN 47
           A ++F  +   G  PN  T NTLI GLC  G    AL+  ++               + N
Sbjct: 115 AFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLIN 174

Query: 48  G---NGEFGVVC-----------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
           G    GE   V            KP+ V YTTII  LCK   +  A +L+ +M  + I+P
Sbjct: 175 GLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISP 234

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           NV TY +LIHGFC   +  EA  L  EM  + + P+V +FN++++ L K GK+DEA  L 
Sbjct: 235 NVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLF 294

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           E M    + PN   Y +L+DG C    + RA  L   M+  G + NV+SY+IL++  CK 
Sbjct: 295 EEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKG 354

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             +E A   +  +L KG   +V  YN +  GL +         L  +M+  G   +   +
Sbjct: 355 GRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITF 414

Query: 274 RTFIDGL 280
           +T I  L
Sbjct: 415 KTIICAL 421



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 139/288 (48%), Gaps = 41/288 (14%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + +  +Y TLINGLC+ G T     L  ++       G   KP+ V YTTII  LCK 
Sbjct: 161 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLE------GHSVKPDLVMYTTIIHCLCKN 214

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +  A +L+ +M  + I+PNV TY +LIHGFC   +  EA  L  EM  + + P+V +F
Sbjct: 215 KLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTF 274

Query: 134 NVIMNELCKNGKMDEASRLLE-----------------------------------LMIQ 158
           N++++ L K GK+DEA  L E                                    M +
Sbjct: 275 NILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKE 334

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G++PN + Y  L+D  C  GR+  A++ F  +   G   NV +Y+++ING CK      
Sbjct: 335 QGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGD 394

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            + L S+M  KG  P+ + + T+   L E  + ++A K   EM   G+
Sbjct: 395 VMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 80/230 (34%), Positives = 125/230 (54%), Gaps = 6/230 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++ V G  PNVFTY TLI+G C  G+   A +L  EM   N        P+  
Sbjct: 219 DACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKN------INPDVY 272

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +ID L KEG +D+A  LF +MK +N+ PN+VTY SLI G C  +    A  L  +M
Sbjct: 273 TFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKM 332

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QG+QPNV S+ ++++ LCK G+++ A +  + ++  G   N   YN +++G C  G  
Sbjct: 333 KEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLF 392

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
               +L   ME  GC  N  ++  +I    +  E + A     EM+++G+
Sbjct: 393 GDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/257 (29%), Positives = 125/257 (48%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A   F  M+     P    FN I++ L KN +      L +     G+ P+    + L+
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           + FC    +  A  +F ++   G   N  + + LI G C   EI+ AL  + +++++G +
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            D V Y TL  GL +  + +   +L  +++ H V  D   Y T I  LCKN  + +A +L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           +  + +     ++  Y  LI G C  G LK A+ L   +    +  DV T+NI+I AL  
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283

Query: 353 DGKMDKARDLFLDMEAK 369
           +GK+D+A  LF +M+ K
Sbjct: 284 EGKIDEAMSLFEEMKHK 300


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 202/385 (52%), Gaps = 33/385 (8%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFE---------EMANGNGEFGVVCKPNTVT---- 62
           +P+  T +++I  LC+ G    AL+L E         +MA  +     +CK + +     
Sbjct: 371 QPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE 430

Query: 63  ------------------YTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIH 103
                             Y ++++ LCK   V +A  +F  M  E +  P+VV+Y+ LI 
Sbjct: 431 FLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILID 490

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           GFC  ++   A+ L+ +M+D    PNV ++N  +N L + G++ +A  + E M+  G  P
Sbjct: 491 GFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSP 550

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           +   Y+TL+ GF L  + ++A ELF +M S GC+ N  +Y+ L++G CK  + + A  L+
Sbjct: 551 DVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M+ +G  PD V Y TL  G   + ++E+A ++FDEM   G   D  AY   + G  + 
Sbjct: 611 RKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 670

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVT 342
           G   EA +LF+ +   + + D  ++N +IDGL K+ RL  A E+F  + +      D+VT
Sbjct: 671 GKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVT 730

Query: 343 YNIMIHALCADGKMDKARDLFLDME 367
           YN +I  LC + ++ +A  +F +++
Sbjct: 731 YNSLIFGLCGEQRLSEAMKVFKEID 755



 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/339 (31%), Positives = 187/339 (55%), Gaps = 17/339 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V +Y+ LI+G C+      A  L+++M + N      C PN  TY   ++GL ++G +
Sbjct: 480 PDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN------CVPNVTTYNAFLNGLMRKGRI 533

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A+ ++ +M     +P+V+TY++LIHGF  A   ++A  LF  M+ +G +PN V++N +
Sbjct: 534 ADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCL 593

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK  K DEA  L   M++ G  P+   Y TL+ GFC  G++ +A E+F  M S G 
Sbjct: 594 LHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH 653

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y+ L+ G+ +  +   A  L+  M+S+  KPD V +N +  GL +  +++ A +
Sbjct: 654 DPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVE 713

Query: 257 LFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +F+ M Q HG + D   Y + I GLC    + EA+++F+ +  LK   D  A+N L++ +
Sbjct: 714 VFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAI 773

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
               +  I ++        +   D   +N+++ A+ A G
Sbjct: 774 ----KCGIVYQF------EIRFKDPPAFNVLMEAMHAAG 802



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 191/406 (47%), Gaps = 42/406 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA+ LF  +   GC+P+   Y+ ++   C+  +   A  LF EMA  +         N 
Sbjct: 251 IEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESK-----APLNN 305

Query: 61  VTYTTIIDGLCK----------------------------------EGFVDKAKELFLKM 86
           V +T  + GLCK                                   G +DKA+E  L++
Sbjct: 306 VAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEI 365

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
              NI P+  T +S+I   C A   + A  L   M+ +G  P++ + ++++NELCK  K+
Sbjct: 366 AGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKI 425

Query: 147 DEASRLLELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES-MGCKHNVFSY 203
            EA   L+ M +       + F YN+L++  C   +V++A  +F +M S      +V SY
Sbjct: 426 QEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSY 485

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           SILI+G+CK  E+  A  LY +M+     P+V  YN    GL    ++  A  +++EM  
Sbjct: 486 SILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVA 545

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G + D   Y T I G        +A ELF T+       +   YNCL+ GLCK  +   
Sbjct: 546 AGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDE 605

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A ELFR +       D VTY  +++  C  GK+++A ++F +M +K
Sbjct: 606 AHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSK 651



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 153/316 (48%), Gaps = 6/316 (1%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           K +  TY  ++D L +   + +A ++F KM  + + PN  TY  L+   CY  + +EA  
Sbjct: 126 KHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVR 185

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            F EM+D+G +P+   +  +   L   GK  E SR+    ++  V     +   L+  F 
Sbjct: 186 FFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFV 245

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP-DV 235
           +  +   A +LF +M   GCK +   YS ++  +CK + ++ A  L+ EM  +   P + 
Sbjct: 246 IQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNN 305

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V +     GL +  ++E+AF+    MQ   +++    Y   I  L ++G I +A E    
Sbjct: 306 VAWTAFLSGLCKSGKIEQAFEACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAEEA--C 362

Query: 296 LRILKYELDIRAYNC--LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           L I    +   +  C  +I  LCK+GR+  A  L  ++ +     D+ T++++I+ LC  
Sbjct: 363 LEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKA 422

Query: 354 GKMDKARDLFLDMEAK 369
            K+ +A++    M+ K
Sbjct: 423 DKIQEAQEFLQGMDRK 438



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 175/405 (43%), Gaps = 48/405 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  L+    + +VFTYN L++ L R      A  +FE+M       GVV  PN  
Sbjct: 112 EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQ----GVV--PNGF 165

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN---------------------- 99
           TY  ++   C E   D+A   F +M D+   P+   Y                       
Sbjct: 166 TYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRD 225

Query: 100 -------------SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                        +L+  F   +   EA  LF  M+  G +P+   ++ ++   CK   +
Sbjct: 226 LEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENL 285

Query: 147 DEASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYS 204
           DEA +L LE+ ++     N   +   + G C +G++ +A E   +M ES+     V  Y 
Sbjct: 286 DEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPV--YD 343

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           +LI    ++  I+ A     E+  + I+P     +++   L +  +V+ A  L + M + 
Sbjct: 344 MLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKR 403

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTL--RILKYELDIRAYNCLIDGLCKSGRLK 322
           G   D   +   I+ LCK   I EA E  + +  +I        +YN L++ LCK+ ++ 
Sbjct: 404 GYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVH 463

Query: 323 IAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A+ +F ++      + DVV+Y+I+I   C   ++ +A  L+  M
Sbjct: 464 QAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQM 508



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 7/174 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   GC+P+  TY TL+ G C  G    A+ +F+EM +   +      P+ V
Sbjct: 605 EAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD------PDVV 658

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  ++ G  + G   +AK+LF  M      P+ V++N +I G   A   ++A  +F  M
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718

Query: 122 -MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             D G  P++V++N ++  LC   ++ EA ++ + + ++ + P+   +N L++ 
Sbjct: 719 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 206/429 (48%), Gaps = 65/429 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------ 56
           AA ++ ++R+ G  P+ FT   +    CR G    A+   EEM     E  +V       
Sbjct: 202 AAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMD 261

Query: 57  -----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NIN 92
                                   PN VTYT ++ G CK+G +++A+ +  +MK+  +I 
Sbjct: 262 CYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIV 321

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            + V Y  +I+G+C     ++A  +  EM D G+  N+  +N ++N LCK G+M+E  ++
Sbjct: 322 VDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKV 381

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M  +G+RP+ + YNTL+DG+C  G + +A E+   M   G      +Y+ L+ G+C 
Sbjct: 382 LQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCS 441

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ AL L+  ML +G+ P+ +  +TL  GLF+  + E+A  L+ E    G+A +   
Sbjct: 442 LHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVIT 501

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW------- 325
           + T I+GLCK G + EA EL   ++ L+   D   Y  L DG CK G+L  A        
Sbjct: 502 FNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKME 561

Query: 326 --------ELFRSLPRGVLIA--------------------DVVTYNIMIHALCADGKMD 357
                   E+F S   G  IA                    ++VTY  +I   C +G + 
Sbjct: 562 HLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLH 621

Query: 358 KARDLFLDM 366
           +A +L+ +M
Sbjct: 622 EACNLYFEM 630



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 198/428 (46%), Gaps = 70/428 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++R  G   N+F YNT+INGLC+ G       + +EM +      V  +P+  
Sbjct: 342 DATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED------VGMRPDKY 395

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+IDG C+EG + KA E+   M    +    +TYN+L+ GFC  +  ++A  L+  M
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLM 455

Query: 122 MDQGVQPN-----------------------------------VVSFNVIMNELCKNGKM 146
           + +GV PN                                   V++FN ++N LCK G+M
Sbjct: 456 LKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRM 515

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA  LL+ M ++   P++  Y TL DG+C  G++  A  L   ME +G   +V  ++  
Sbjct: 516 AEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSF 575

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+   K+      ++SEM ++G+ P++V Y  L  G  +   +  A  L+ EM  +G+
Sbjct: 576 ITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGM 635

Query: 267 AADTWAYRTFIDGLCKNGYIVEA---------VELFRTLRILKYELDIRA---------- 307
             + +     +    K G + EA         +++     I   E+D  +          
Sbjct: 636 NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGN 695

Query: 308 -------YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA- 359
                  +N +I GLCKSGR+  A  LF SL     + D  TY+ +IH   A G +D+A 
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 360 --RDLFLD 365
             RD+ L 
Sbjct: 756 SLRDVMLS 763



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 201/376 (53%), Gaps = 19/376 (5%)

Query: 2   EAAALFMKLRVF------GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 55
           +A  L   L VF      GC P++ + N L+N L ++G   +A  ++ +M       GV+
Sbjct: 160 DAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIA----GVL 215

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
             P+  T   +    C++G V +A E   +M+   +  N+V Y++++  +C      +A+
Sbjct: 216 --PDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDAR 273

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDG 174
            +   +  +G+ PNVV++ +++   CK+G+M+EA R+++ M + G +  +   Y  +++G
Sbjct: 274 RILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +C  GR++ A  +   M   G   N+F Y+ +ING CK   +E    +  EM   G++PD
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
              YNTL  G      + +AF++   M R+G+AA T  Y T + G C    I +A+ L+ 
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLW- 452

Query: 295 TLRILKYELDIRAYNC--LIDGLCKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALC 351
              +LK  +     +C  L+DGL K+G+ + A  L++ +L RG L  +V+T+N +I+ LC
Sbjct: 453 -FLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARG-LAKNVITFNTVINGLC 510

Query: 352 ADGKMDKARDLFLDME 367
             G+M +A +L   M+
Sbjct: 511 KIGRMAEAEELLDRMK 526



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 195/429 (45%), Gaps = 86/429 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ +    G   NV T+NT+INGLC+ G    A  L + M        + C P+++
Sbjct: 482 QALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKE------LRCPPDSL 535

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKD--------------------------------- 88
           TY T+ DG CK G +  A  L  KM+                                  
Sbjct: 536 TYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEM 595

Query: 89  --ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
               ++PN+VTY +LI G+C   + +EA  L+ EM++ G+ PNV   + +M+   K GK+
Sbjct: 596 SARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKV 655

Query: 147 DEASRLLELMIQIGVRPNAFV--------------------------YNTLMDGFCLTGR 180
           DEA+ +L+ ++ I + P   +                          +N ++ G C +GR
Sbjct: 656 DEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGR 715

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A+ LF S+ +     + F+YS LI+G   +  I+ A SL   MLS G+ P+++ YN+
Sbjct: 716 IADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNS 775

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  ++ RA  LF+++Q  G++ +   Y T ID  CK G   EA +L +      
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQK----- 830

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
                         + + G ++ A +L   +    +  + +TY  +IH     G M++  
Sbjct: 831 --------------MVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 876

Query: 361 DLFLDMEAK 369
            L+ +M  +
Sbjct: 877 KLYDEMHIR 885



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 181/375 (48%), Gaps = 17/375 (4%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTG--HTIVAL---------NLFEEMANGNGEF 52
           AAL +  R+    P++ ++  L++ L R    H   AL          LF  +A    +F
Sbjct: 86  AALHL-FRLAPSRPSLVSHAQLLHILARARRFHDARALLSSLPPHAEPLFPHLAEVYRDF 144

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
                 + V++  ++      G +  A  +F  M      P++ + N L++    + D  
Sbjct: 145 TF----SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPG 200

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
            A  ++ +M   GV P+  +  ++    C++G++ +A   +E M  +G+  N   Y+ +M
Sbjct: 201 MAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVM 260

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-I 231
           D +C  G    A  +  S++  G   NV +Y++L+ GYCK+  +E A  +  EM   G I
Sbjct: 261 DCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDI 320

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             D V Y  +  G  +  +++ A ++ +EM+  G+  + + Y T I+GLCK G + E  +
Sbjct: 321 VVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQK 380

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           + + +  +    D  +YN LIDG C+ G ++ A+E+ R + R  L A  +TYN ++   C
Sbjct: 381 VLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFC 440

Query: 352 ADGKMDKARDLFLDM 366
           +   +D A  L+  M
Sbjct: 441 SLHAIDDALRLWFLM 455



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 138/300 (46%), Gaps = 48/300 (16%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+ TY  LI G C+ G+   A NL+ EM N NG       PN    + ++    KE
Sbjct: 599 GLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVN-NG-----MNPNVFICSALMSCFYKE 652

Query: 74  GFVDKAKELFLKM--------------------------KDENINPNVVTYNSLIHGFCY 107
           G VD+A  +  K+                           D N +   V +N +I G C 
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCK 712

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           +    +AK LF  + ++   P+  +++ +++    +G +DEA  L ++M+  G+ PN   
Sbjct: 713 SGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIIT 772

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE------------ 215
           YN+L+ G C +G+++RA  LF  ++S G   N  +Y+ LI+ YCK  +            
Sbjct: 773 YNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMV 832

Query: 216 ----IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
               +E A+ L  +M+   + P+ + Y TL  G  +   +E   KL+DEM   G+    W
Sbjct: 833 EEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNW 892



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 22/184 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF  LR     P+ FTY++LI+G   +G    A +L + M +          PN +
Sbjct: 718 DAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG------LTPNII 771

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLCK G + +A  LF K++ + I+PN +TYN+LI  +C      EA  L  +M
Sbjct: 772 TYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKM 831

Query: 122 MDQG----------------VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           +++G                V PN +++  +++   K+G M+E S+L + M   G+ P  
Sbjct: 832 VEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTN 891

Query: 166 FVYN 169
           ++ N
Sbjct: 892 WIGN 895



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 83/169 (49%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +  S+ +L+  +    ++  AL+++  M   G +P +   N L   L +      A  ++
Sbjct: 147 SAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVY 206

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            +M+  GV  D +         C++G + +AVE    +  +  E+++ AY+ ++D  C  
Sbjct: 207 GQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGM 266

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G  + A  +  SL R  L  +VVTY +++   C DG+M++A  +  +M+
Sbjct: 267 GWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMK 315


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 184/352 (52%), Gaps = 6/352 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   Y TLI+G  + GH   A   F+EM +          P+ +TYTT+I G  + G V
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK------ISPDYITYTTLIQGFGQGGKV 414

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            + + LF +M    + P+ VTY +LI  +C A +   A  L  EM+  G+ PN+V++  +
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK+G++D A+ LL+ M + G++ N  +YN++++G C  G + +A +L   ME  G 
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +Y+ +I+ YC+  +I+ A  L  EML +G++P VV +N L  G   +  +E   +
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L   M   G+  D   Y T +   C    +    ++++ +R      D   YN LI G C
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           K+  LK AW L++ +     +  V +YN +I       K  +AR+LF +M  
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRG 706



 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 158/276 (57%), Gaps = 6/276 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++   G  PN+ TY  LI+GLC+ G    A  L +EM     +       N   
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL------NVCI 505

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y ++++G+CK G +++A +L  +M+   I+P+ +TY ++I  +C   D ++A  L  EM+
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+QP VV+FNV+MN  C  G +++  RLL  M++ G+ P+A  YNTLM   C+   +N
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              +++  M + G   +  +Y+ILI G+CK + ++ A  LY EM+ KG  P V  YN L 
Sbjct: 626 TTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
              ++  +   A +LF+EM+ HG+ AD   Y  F+D
Sbjct: 686 KRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 184/366 (50%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L M++      P+V +Y+T+I+G C  G    AL L ++M           KPN  
Sbjct: 276 EAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG------LKPNRY 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +II  LCK G   +A+++  +M  + I P+ V Y +LIHGF        A   F EM
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+ +++  ++    + GK+ E   L   MI  G++P+   Y TL+D +C  G +
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEM 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M  MG   N+ +Y  LI+G CK+ E++ A  L  EM  KG++ +V IYN++
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +   +E+A KL  EM+  G+  D   Y T ID  C+ G I +A +L + +     
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  +N L++G C  G L+    L   +    ++ D +TYN ++   C    M+    
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 362 LFLDME 367
           ++  M 
Sbjct: 630 IYKRMR 635



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 175/341 (51%), Gaps = 6/341 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY TLI G  + G  I   NLF EM +         KP+ VTYTT+ID  CK G +
Sbjct: 396 PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG------LKPDEVTYTTLIDVYCKAGEM 449

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  L  +M    + PN+VTY +LI G C   + + A  L  EM  +G+Q NV  +N +
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N +CK G +++A +L++ M   G+ P+A  Y T++D +C  G +++A +L   M   G 
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           +  V ++++L+NG+C    +E    L   ML KGI PD + YNTL       + +    K
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           ++  M+  GVA D+  Y   I G CK   + EA  L++ +    Y   + +YN LI    
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           K  +   A ELF  +    L+AD   YN  +     +G ++
Sbjct: 690 KKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 196/366 (53%), Gaps = 10/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNT 60
           EA  L  KL  +G    V + N  ++ +      I +A+ +F        E+G+    NT
Sbjct: 208 EARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF-------CEYGISW--NT 258

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  II  LC+ G V +A  L ++M   +  P+VV+Y+++I G+C+  +  +A  L  +
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN  ++N I+  LCK GK  EA ++L  M+   + P+  VY TL+ GF   G 
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A + F  M S     +  +Y+ LI G+ +  ++    +L+ EM+S+G+KPD V Y T
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +  ++  AF L +EM + G+  +   Y   IDGLCK+G +  A EL   +R   
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +L++  YN +++G+CK+G ++ A +L + +    +  D +TY  +I A C  G +DKA 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 361 DLFLDM 366
            L  +M
Sbjct: 559 KLLQEM 564



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 189/359 (52%), Gaps = 9/359 (2%)

Query: 8   MKLRVF---GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           M ++VF   G   N  +YN +I  LCR G    A  L  +M   +        P+ V+Y+
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS------TPDVVSYS 297

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+IDG C  G + KA +L   M+ + + PN  TYNS+I   C      EA+ +  EMM Q
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P+ V +  +++   K G +  A++  + M+   + P+   Y TL+ GF   G+V   
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + LF  M S G K +  +Y+ LI+ YCK  E+  A SL++EM+  G+ P++V Y  L  G
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  +++ A +L DEM++ G+  +   Y + ++G+CK G I +A++L + + +   + D
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              Y  +ID  C+ G +  A +L + +    L   VVT+N++++  C  G ++    L 
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +++ G +PN +TYN++I  LC+ G +  A  +  EM +          P+ V
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK------IIPDNV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTT+I G  K G V  A + F +M  + I+P+ +TY +LI GF       E + LF EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+ V++  +++  CK G+M  A  L   M+Q+G+ PN   Y  L+DG C  G +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M   G + NV  Y+ ++NG CK   IE A+ L  EM   GI PD + Y T+
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                 +  +++A KL  EM   G+      +   ++G C  G + +   L   +     
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN L+   C    +    ++++ +    +  D  TYNI+I   C    + +A  
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 362 LFLDMEAK 369
           L+ +M  K
Sbjct: 665 LYKEMIEK 672



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 10/353 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN   ++     L   GH   A  L +++ +    +G+V     VT  +    L +    
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLS----YGLV-----VTVDSCNAFLSRIANN 238

Query: 77  DKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            +  E+ +K+  E  I+ N  +YN +I+  C      EA  L ++M  +   P+VVS++ 
Sbjct: 239 SEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  C  G++ +A +L++ M   G++PN + YN+++   C  G+   AE++   M S  
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +   Y+ LI+G+ K   +  A   + EMLSK I PD + Y TL  G  +  +V    
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G+  D   Y T ID  CK G +V A  L   +  +    +I  Y  LIDGL
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           CK G L  A EL   + +  L  +V  YN M++ +C  G +++A  L  +ME 
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 2/312 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN + +      L + G + +A++L  K+    +   V + N+ +     AN+    +  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRI--ANNSEGIEMA 245

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
                + G+  N  S+N+I+  LC+ GK+ EA RLL  M      P+   Y+T++DG+C 
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G + +A +L   M+  G K N ++Y+ +I   CK  +   A  +  EM+S+ I PD V+
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G F++  V  A K FDEM    ++ D   Y T I G  + G ++E   LF  + 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D   Y  LID  CK+G +  A+ L   + +  +  ++VTY  +I  LC  G++D
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 358 KARDLFLDMEAK 369
            A +L  +M  K
Sbjct: 486 TANELLDEMRKK 497



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 133/258 (51%), Gaps = 6/258 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++R  G + NV  YN+++NG+C+ G+   A+ L +EM     +      P+ +T
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID------PDAIT 540

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT+ID  C+ G +DKA +L  +M D  + P VVT+N L++GFC      +   L   M+
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P+ +++N +M + C    M+  +++ + M   GV P++  YN L+ G C    + 
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L+  M   G    V SY+ LI  + K ++   A  L+ EM   G+  D  IYN   
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFV 720

Query: 243 IGLFEIHQVERAFKLFDE 260
              +E   VE    L DE
Sbjct: 721 DMCYEEGDVEITLNLCDE 738



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 6/228 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++ V G +P+  TY T+I+  CR G    A  L +EM +         +P  V
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG------LQPTVV 574

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++G C  G ++    L   M ++ I P+ +TYN+L+   C  N  N    ++  M
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QGV P+  ++N+++   CK   + EA  L + MI+ G  P    YN L+  F    + 
Sbjct: 635 RNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKF 694

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
             A ELF  M   G   +   Y+  ++   +  ++E  L+L  E + K
Sbjct: 695 XEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 185/352 (52%), Gaps = 6/352 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   Y TLI+G  + GH   A   F+EM +          P+ +TYTT+I G  + G V
Sbjct: 361 PDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK------ISPDYITYTTLIQGFGQGGKV 414

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            + + LF +M    + P+ VTY +LI  +C A +   A  L  EM+  G+ PN+V++  +
Sbjct: 415 IEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGAL 474

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK+G++D A+ LL+ M + G++ N  +YN++++G C  G + +A +L   ME  G 
Sbjct: 475 IDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGI 534

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +Y+ +I+ YC+  +I+ A  L  EML +G++P VV +N L  G   +  +E   +
Sbjct: 535 DPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDR 594

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L   M   G+  D   Y T +   C    +    ++++ +R      D   YN LI G C
Sbjct: 595 LLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHC 654

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           K+  LK AW L++ +     +  V +YN +I       K+ +AR+LF +M  
Sbjct: 655 KARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRG 706



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 159/276 (57%), Gaps = 6/276 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++   G  PN+ TY  LI+GLC+ G    A  L +EM     +       N   
Sbjct: 452 AFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL------NVCI 505

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y ++++G+CK G +++A +L  +M+   I+P+ +TY ++I  +C   D ++A  L  EM+
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+QP VV+FNV+MN  C  G +++  RLL  M++ G+ P+A  YNTLM   C+   +N
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              +++  M + G   +  +Y+ILI G+CK + ++ A  LY EM+ KG  P V  YN L 
Sbjct: 626 TTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALI 685

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
              ++  ++  A +LF+EM+ HG+ AD   Y  F+D
Sbjct: 686 KRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVD 721



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 184/366 (50%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L M++      P+V +Y+T+I+G C  G    AL L ++M           KPN  
Sbjct: 276 EAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKG------LKPNRY 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +II  LCK G   +A+++  +M  + I P+ V Y +LIHGF        A   F EM
Sbjct: 330 TYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+ +++  ++    + GK+ E   L   MI  G++P+   Y TL+D +C  G +
Sbjct: 390 LSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEM 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M  MG   N+ +Y  LI+G CK+ E++ A  L  EM  KG++ +V IYN++
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ +   +E+A KL  EM+  G+  D   Y T ID  C+ G I +A +L + +     
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  +N L++G C  G L+    L   +    ++ D +TYN ++   C    M+    
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 362 LFLDME 367
           ++  M 
Sbjct: 630 IYKRMR 635



 Score =  190 bits (482), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/341 (33%), Positives = 176/341 (51%), Gaps = 6/341 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY TLI G  + G  I   NLF EM +         KP+ VTYTT+ID  CK G +
Sbjct: 396 PDYITYTTLIQGFGQGGKVIEPQNLFHEMISRG------LKPDEVTYTTLIDVYCKAGEM 449

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  L  +M    + PN+VTY +LI G C   + + A  L  EM  +G+Q NV  +N +
Sbjct: 450 VNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSM 509

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N +CK G +++A +L++ M   G+ P+A  Y T++D +C  G +++A +L   M   G 
Sbjct: 510 VNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGL 569

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           +  V ++++L+NG+C    +E    L   ML KGI PD + YNTL       + +    K
Sbjct: 570 QPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTK 629

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           ++  M+  GVA D+  Y   I G CK   + EA  L++ +    Y   + +YN LI    
Sbjct: 630 IYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFY 689

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           K  ++  A ELF  +    L+AD   YN  +     +G ++
Sbjct: 690 KKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 196/366 (53%), Gaps = 10/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNT 60
           EA  L  KL  +G    V + N  ++ +      I +A+ +F        E+G+    NT
Sbjct: 208 EARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVF-------CEYGISW--NT 258

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  II  LC+ G V +A  L ++M   +  P+VV+Y+++I G+C+  +  +A  L  +
Sbjct: 259 TSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDD 318

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN  ++N I+  LCK GK  EA ++L  M+   + P+  VY TL+ GF   G 
Sbjct: 319 MQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGH 378

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A + F  M S     +  +Y+ LI G+ +  ++    +L+ EM+S+G+KPD V Y T
Sbjct: 379 VRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +  ++  AF L +EM + G+  +   Y   IDGLCK+G +  A EL   +R   
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +L++  YN +++G+CK+G ++ A +L + +    +  D +TY  +I A C  G +DKA 
Sbjct: 499 LQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAH 558

Query: 361 DLFLDM 366
            L  +M
Sbjct: 559 KLLQEM 564



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 189/359 (52%), Gaps = 9/359 (2%)

Query: 8   MKLRVF---GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           M ++VF   G   N  +YN +I  LCR G    A  L  +M   +        P+ V+Y+
Sbjct: 244 MAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSS------TPDVVSYS 297

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+IDG C  G + KA +L   M+ + + PN  TYNS+I   C      EA+ +  EMM Q
Sbjct: 298 TVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQ 357

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P+ V +  +++   K G +  A++  + M+   + P+   Y TL+ GF   G+V   
Sbjct: 358 KIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEP 417

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           + LF  M S G K +  +Y+ LI+ YCK  E+  A SL++EM+  G+ P++V Y  L  G
Sbjct: 418 QNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDG 477

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  +++ A +L DEM++ G+  +   Y + ++G+CK G I +A++L + + +   + D
Sbjct: 478 LCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPD 537

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              Y  +ID  C+ G +  A +L + +    L   VVT+N++++  C  G ++    L 
Sbjct: 538 AITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLL 596



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +++ G +PN +TYN++I  LC+ G +  A  +  EM +          P+ V
Sbjct: 311 KALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK------IIPDNV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YTT+I G  K G V  A + F +M  + I+P+ +TY +LI GF       E + LF EM
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P+ V++  +++  CK G+M  A  L   M+Q+G+ PN   Y  L+DG C  G +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M   G + NV  Y+ ++NG CK   IE A+ L  EM   GI PD + Y T+
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                 +  +++A KL  EM   G+      +   ++G C  G + +   L   +     
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGI 604

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN L+   C    +    ++++ +    +  D  TYNI+I   C    + +A  
Sbjct: 605 VPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWF 664

Query: 362 LFLDMEAK 369
           L+ +M  K
Sbjct: 665 LYKEMIEK 672



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 171/353 (48%), Gaps = 10/353 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN   ++     L   GH   A  L +++ +    +G+V     VT  +    L +    
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLS----YGLV-----VTVDSCNAFLSRIANN 238

Query: 77  DKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            +  E+ +K+  E  I+ N  +YN +I+  C      EA  L ++M  +   P+VVS++ 
Sbjct: 239 SEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYST 298

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  C  G++ +A +L++ M   G++PN + YN+++   C  G+   AE++   M S  
Sbjct: 299 VIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQK 358

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +   Y+ LI+G+ K   +  A   + EMLSK I PD + Y TL  G  +  +V    
Sbjct: 359 IIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQ 418

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G+  D   Y T ID  CK G +V A  L   +  +    +I  Y  LIDGL
Sbjct: 419 NLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGL 478

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           CK G L  A EL   + +  L  +V  YN M++ +C  G +++A  L  +ME 
Sbjct: 479 CKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 155/312 (49%), Gaps = 2/312 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN + +      L + G + +A++L  K+    +   V + N+ +     AN+    +  
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRI--ANNSEGIEMA 245

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
                + G+  N  S+N+I+  LC+ GK+ EA RLL  M      P+   Y+T++DG+C 
Sbjct: 246 IKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCH 305

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G + +A +L   M+  G K N ++Y+ +I   CK  +   A  +  EM+S+ I PD V+
Sbjct: 306 LGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVV 365

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G F++  V  A K FDEM    ++ D   Y T I G  + G ++E   LF  + 
Sbjct: 366 YTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMI 425

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D   Y  LID  CK+G +  A+ L   + +  +  ++VTY  +I  LC  G++D
Sbjct: 426 SRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELD 485

Query: 358 KARDLFLDMEAK 369
            A +L  +M  K
Sbjct: 486 TANELLDEMRKK 497



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 134/258 (51%), Gaps = 6/258 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++R  G + NV  YN+++NG+C+ G+   A+ L +EM     +      P+ +T
Sbjct: 487 ANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGID------PDAIT 540

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT+ID  C+ G +DKA +L  +M D  + P VVT+N L++GFC      +   L   M+
Sbjct: 541 YTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWML 600

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P+ +++N +M + C    M+  +++ + M   GV P++  YN L+ G C    + 
Sbjct: 601 EKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLK 660

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L+  M   G    V SY+ LI  + K K+I  A  L+ EM   G+  D  IYN   
Sbjct: 661 EAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFV 720

Query: 243 IGLFEIHQVERAFKLFDE 260
              +E   VE    L DE
Sbjct: 721 DMCYEEGDVEITLNLCDE 738



 Score =  107 bits (268), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 6/228 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++ V G +P+  TY T+I+  CR G    A  L +EM +         +P  V
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRG------LQPTVV 574

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++G C  G ++    L   M ++ I P+ +TYN+L+   C  N  N    ++  M
Sbjct: 575 TFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRM 634

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +QGV P+  ++N+++   CK   + EA  L + MI+ G  P    YN L+  F    ++
Sbjct: 635 RNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKI 694

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
             A ELF  M   G   +   Y+  ++   +  ++E  L+L  E + K
Sbjct: 695 LEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 198/420 (47%), Gaps = 58/420 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++R  GC PNV TY  L++   ++   I A ++F  M +        C PN V
Sbjct: 505 QARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDA------ACYPNAV 558

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN----------------INPNVVTYNSLIHGF 105
           TY+ +IDGLCK G + KA E++ K+   +                I PNVVTY +LI G 
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGL 618

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C A   ++A  L   M+  G +PN + ++ +++  CK GK+D A  +   M + G  P+ 
Sbjct: 619 CKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSV 678

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y +L+D     GR++ A ++   M +  C  NV +Y+ +I+G  K  EIE AL+L S 
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSL 738

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M  KG  P+VV Y  L  GL +  + + + KLF +M   G A +   YR  I+  C  G 
Sbjct: 739 MEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGL 798

Query: 286 IVEAVELFRTLRILKYELDIRAYNC---------------------------------LI 312
           + EA  L   ++   +   ++ Y+C                                 LI
Sbjct: 799 LDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLI 858

Query: 313 DGLCKSGRLKIAWELFRSL---PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D   K+GRL+ A EL + L      + +     Y  +I ALC   ++++A  L+ +M  K
Sbjct: 859 DSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRK 918



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 183/367 (49%), Gaps = 22/367 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY  +I  LC+      +  LF+EM       GV   P+  TYT +ID  CK G +
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRA----GV--NPDVYTYTILIDSFCKAGLI 503

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A+  F +M+    +PNVVTY +L+H +  +    +A  +F  M+D    PN V+++ +
Sbjct: 504 EQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSAL 563

Query: 137 MNELCKNGKMDEASRLLELMIQIG----------------VRPNAFVYNTLMDGFCLTGR 180
           ++ LCK G++ +A  + E +I                   + PN   Y  L+DG C   +
Sbjct: 564 IDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQK 623

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A EL  +M + GC+ N   Y  LI+G+CK  +I+ A  ++  M   G  P V  Y +
Sbjct: 624 VSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTS 683

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   +F+  +++ A K+  EM       +   Y   IDGL K G I +A+ L   +    
Sbjct: 684 LIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKG 743

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  Y  LIDGL K+G+   + +LF+ +       + VTY ++I+  CA G +D+A 
Sbjct: 744 CSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAH 803

Query: 361 DLFLDME 367
            L  +M+
Sbjct: 804 LLLDEMK 810



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 173/357 (48%), Gaps = 22/357 (6%)

Query: 29  LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 88
           LC  G    A  + +EM       G V  P+T TYT +I  LC+   V+K+  LF +MK 
Sbjct: 427 LCGVGKFEKAFQILKEMMRK----GFV--PDTSTYTKVITFLCQAKKVEKSFLLFQEMKR 480

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
             +NP+V TY  LI  FC A    +A+  F EM   G  PNVV++  +++   K+ ++ +
Sbjct: 481 AGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQ 540

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM----------------E 192
           A  +   M+     PNA  Y+ L+DG C  G + +A E++  +                +
Sbjct: 541 AHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGND 600

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           +     NV +Y  LI+G CK +++  A  L   ML+ G +P+ ++Y+ L  G  +I +++
Sbjct: 601 TCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKID 660

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F  M + G       Y + ID + K+G +  A+++   +       ++  Y  +I
Sbjct: 661 NAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMI 720

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DGL K G ++ A  L   +       +VVTY  +I  L   GK D +  LF  M +K
Sbjct: 721 DGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK 777



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 190/483 (39%), Gaps = 118/483 (24%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLIN---------------------------------- 27
           EA     +L+ FG  P+  TYN L+                                   
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFA 246

Query: 28  -GLCRTGHTIVALNLFE------------EMANGNGEFGVV--------------CKPNT 60
             LC+ G    ALN+ E            +M +G  E  +               C PN 
Sbjct: 247 QALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNV 306

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++ G  K+      K +   M  E  NPN   +NSL+HG+C A D+  A  LF  
Sbjct: 307 VTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNR 366

Query: 121 MMDQGVQPNVVSFNVIMNELCKN------------------------------------- 143
           M   G  P  V++N+ +  +C                                       
Sbjct: 367 MTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRC 426

Query: 144 ----GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
               GK ++A ++L+ M++ G  P+   Y  ++   C   +V ++  LF  M+  G   +
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V++Y+ILI+ +CK   IE A S + EM S G  P+VV Y  L     +  Q+ +A  +F 
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL----------------RILKYEL 303
            M       +   Y   IDGLCK G I +A E++  L                       
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAP 606

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++  Y  LIDGLCK+ ++  A EL  ++       + + Y+ +I   C  GK+D A+++F
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF 666

Query: 364 LDM 366
           L M
Sbjct: 667 LRM 669



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 175/375 (46%), Gaps = 28/375 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN   +N+L++G C  G    A  LF  M            P  V Y   I  +C +
Sbjct: 336 GCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGS------PPGYVAYNIFIGSICGQ 389

Query: 74  G------FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D  ++++ +M   +   N V   +     C    + +A  +  EMM +G  
Sbjct: 390 EELPNAELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFV 449

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  ++  ++  LC+  K++++  L + M + GV P+ + Y  L+D FC  G + +A   
Sbjct: 450 PDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSW 509

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M S+GC  NV +Y+ L++ Y K+K++  A  ++  M+     P+ V Y+ L  GL +
Sbjct: 510 FDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCK 569

Query: 248 IHQVERAFKLFDEM----------------QRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             ++++A ++++++                    +A +   Y   IDGLCK   + +A E
Sbjct: 570 AGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHE 629

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   +     E +   Y+ LIDG CK G++  A E+F  + +   +  V TY  +I  + 
Sbjct: 630 LLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 352 ADGKMDKARDLFLDM 366
            DG++D A  +  +M
Sbjct: 690 KDGRLDLAMKVLSEM 704



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 146/291 (50%), Gaps = 42/291 (14%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F+++   G  P+V TY +LI+ + + G   +A+ +  EM N +      C PN VT
Sbjct: 662 AQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDS------CNPNVVT 715

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +IDGL K G ++KA  L   M+++  +PNVVTY +LI G       + +  LF +M 
Sbjct: 716 YTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMN 775

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM------------------------IQ 158
            +G  PN V++ V++N  C  G +DEA  LL+ M                          
Sbjct: 776 SKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIAS 835

Query: 159 IGVR---------PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS---YSIL 206
           +G+          P A VY  L+D F   GR+  A EL   +  +    N+ S   Y+ L
Sbjct: 836 LGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASL 895

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
           I   C   ++E A +LY+EM  KGI PD++++ +L  GL E+++ + A +L
Sbjct: 896 IQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/370 (23%), Positives = 140/370 (37%), Gaps = 75/370 (20%)

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+ G  D+A E   ++KD    P+ VTYN+L+     A        +  EM   G   + 
Sbjct: 180 CRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDR 239

Query: 131 VSFNVIMNELCKNGKMDEASRLLE---------LMIQI---------------------- 159
            +       LCK G+  +A  +LE         L  Q+                      
Sbjct: 240 STIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRC 299

Query: 160 -GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               PN   Y TL+ GF    +    + +   M + GC  N   ++ L++GYC   +   
Sbjct: 300 NSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAY 359

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIG---------------------------------- 244
           A  L++ M + G  P  V YN +FIG                                  
Sbjct: 360 AYKLFNRMTTCGSPPGYVAYN-IFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKV 418

Query: 245 --------LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
                   L  + + E+AF++  EM R G   DT  Y   I  LC+   + ++  LF+ +
Sbjct: 419 NTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEM 478

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      D+  Y  LID  CK+G ++ A   F  +       +VVTY  ++HA     ++
Sbjct: 479 KRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQL 538

Query: 357 DKARDLFLDM 366
            +A D+F  M
Sbjct: 539 IQAHDIFHRM 548



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 3/232 (1%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            NV++   C++G  DEA   L  +   G RP+A  YN L+      G+V     +   M 
Sbjct: 172 LNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMS 231

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           + G   +  +        CK      AL++  +   +    D V+   +  GL E     
Sbjct: 232 ASGFCMDRSTIGYFAQALCKVGRWADALNMLEK---EDFNLDTVLCTQMISGLMEASLFN 288

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A      M+ +    +   YRT + G  K         +   +       +   +N L+
Sbjct: 289 EAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLV 348

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
            G C +G    A++LF  +         V YNI I ++C   ++  A  L L
Sbjct: 349 HGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDL 400


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 199/397 (50%), Gaps = 33/397 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           +A  LF+ ++  GC PNV  +  LI+GLC++G    A  LF+ M                
Sbjct: 271 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 330

Query: 48  -GNGEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G  + G +              C P+  TY T+I GLC +   ++A+EL      E   
Sbjct: 331 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFT 389

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P VVT+ +LI+G+C A  +++A  +  +MM    + ++  F  ++N L K  ++ EA  L
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G+ PN   Y +++DG+C +G+V+ A E+   ME  GC+ N ++Y+ L+ G  K
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +K++  A++L ++M   GI P+V+ Y TL  G  + H  + AF+LF+ M+++G+  D  A
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 569

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y    D LCK G   EA        +    L    Y  LIDG  K+G    A  L   + 
Sbjct: 570 YAVLTDALCKAGRAEEAYSFIVRKGV---ALTKVYYTTLIDGFSKAGNTDFAATLIERMI 626

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                 D  TY++++HALC   ++++A  +   M  +
Sbjct: 627 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/354 (31%), Positives = 169/354 (47%), Gaps = 7/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYNT+I   C+ G    A   F  +  G  E      P T T   ++ G C+ 
Sbjct: 178 GLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE------PETFTCNALVLGYCRT 231

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + KA  LFL M       N  +Y  LI G C A    +A  LF+ M   G  PNV +F
Sbjct: 232 GELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAF 291

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++ LCK+G++ +A  L + M Q GV P+   YN ++ G+   GR+N A ++   ME 
Sbjct: 292 TFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEK 351

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  + ++Y+ LI G C  K  E A  L +  + +G  P VV +  L  G     + + 
Sbjct: 352 NGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDD 410

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++ ++M       D   +   I+ L K   + EA EL   +       ++  Y  +ID
Sbjct: 411 ALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIID 470

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           G CKSG++ IA E+ + + R     +  TYN +++ L  D K+ KA  L   M+
Sbjct: 471 GYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQ 524



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 206/484 (42%), Gaps = 126/484 (26%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  PNV TY ++I+G C++G   +AL + + M          C+PN  
Sbjct: 445 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG------CQPNAW 498

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++ GL K+  + KA  L  KM+ + I PNV+TY +L+ G C  +D++ A  LF EM
Sbjct: 499 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EM 557

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEA------------------------------- 149
           M+Q G++P+  ++ V+ + LCK G+ +EA                               
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDF 617

Query: 150 -SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
            + L+E MI  G  P+++ Y+ L+   C   R+N A  +   M   G K  +F+Y+ILI+
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 677

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +  + + A  +Y+EM S G KP    Y        +  ++E A  L  +M+R GVA 
Sbjct: 678 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 737

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTL-------------------------------- 296
           D   Y   IDG    GYI  A    + +                                
Sbjct: 738 DVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT 797

Query: 297 -----------------RILKYELD--IRAYNCLIDGLCKSGRLKIAWELF--------- 328
                            R++K+ L+  +  Y+ LI G CK+GRL+ A  L          
Sbjct: 798 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 857

Query: 329 --------------------RSLPRGVLIAD------VVTYNIMIHALCADGKMDKARDL 362
                               ++L    ++++      + +Y +++  LC +G  +K + L
Sbjct: 858 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 917

Query: 363 FLDM 366
           F D+
Sbjct: 918 FCDL 921



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 156/321 (48%), Gaps = 34/321 (10%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            ++ ++  + + P+ VTYN++I  +C   D   A   F  +++ G++P   + N ++   
Sbjct: 169 RVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGY 228

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+ G++ +A  L  +M  +G + N + Y  L+ G C    V +A  LF+ M+  GC  NV
Sbjct: 229 CRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNV 288

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +++ LI+G CK+  +  A  L+  M   G+ P V+ YN + +G  ++ ++  A K+ + 
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 261 MQRHGVAADTWAYRTFIDGLCK-----------------------------NGYIV---- 287
           M+++G   D W Y T I GLC                              NGY +    
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKF 408

Query: 288 -EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +A+ +   +   K +LD++ +  LI+ L K  RLK A EL   +    L+ +V+TY  +
Sbjct: 409 DDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSI 468

Query: 347 IHALCADGKMDKARDLFLDME 367
           I   C  GK+D A ++   ME
Sbjct: 469 IDGYCKSGKVDIALEVLKMME 489



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 162/364 (44%), Gaps = 22/364 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L  ++   GC P+ +TY+ L++ LC+      AL + ++M+      G+ C      
Sbjct: 618 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR----GIKC--TIFA 671

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +ID + +EG  D AK ++ +M      P+  TY   I+ +C      +A+ L ++M 
Sbjct: 672 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 731

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC------ 176
            +GV P+VV++N++++     G +D A   L+ M+     PN + Y  L+          
Sbjct: 732 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 791

Query: 177 -----LTGRVNRAE-----ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                 +G  N  E     +L   M   G    V +YS LI G+CK   +E A  L   M
Sbjct: 792 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 851

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             KG+ P+  IY  L     +    E+A      M   G      +YR  + GLC  G  
Sbjct: 852 CGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 911

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +   LF  L  L Y  D  A+  L DGL K+G + I +++   + +        TY ++
Sbjct: 912 EKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971

Query: 347 IHAL 350
            + +
Sbjct: 972 TNKM 975



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 22/301 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++ + G +  +F Y  LI+ + R G    A  ++ EM +         KP+  
Sbjct: 652 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPSAT 705

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT  I+  CKEG ++ A++L LKM+ E + P+VVTYN LI G  +    + A      M
Sbjct: 706 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 765

Query: 122 MDQGVQPNVVSFNVIMNELCKNG----------------KMDEASRLLELMIQIGVRPNA 165
           +    +PN  ++ +++  L K                  ++D   +LLE M++ G+ P  
Sbjct: 766 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 825

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y++L+ GFC  GR+  A  L   M   G   N   Y++LI   C  K  E ALS  S 
Sbjct: 826 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 885

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M   G +P +  Y  L +GL      E+   LF ++   G   D  A++   DGL K GY
Sbjct: 886 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 945

Query: 286 I 286
           +
Sbjct: 946 V 946



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 22/241 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L +K+   G  P+V TYN LI+G    G+   A +  + M       G  C+PN  
Sbjct: 722 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV------GASCEPNYW 775

Query: 62  TYTTIIDGLCKEGF----------------VDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           TY  ++  L K                   +D   +L  +M    +NP V TY+SLI GF
Sbjct: 776 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 835

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C A    EA  L   M  +G+ PN   + +++   C     ++A   + +M + G +P  
Sbjct: 836 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQL 895

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y  L+ G C  G   + + LF  +  +G  H+  ++ IL +G  K   ++    + S 
Sbjct: 896 ESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSI 955

Query: 226 M 226
           M
Sbjct: 956 M 956


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/399 (29%), Positives = 203/399 (50%), Gaps = 41/399 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF +++     P VF YN LI+GLC+      A  LF+EM            P+ +TY T
Sbjct: 574 LFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEM------LARRLLPSLITYNT 627

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK+G  +K+ ++  +MK +NI P+++T+N+L+ G   A    +A+ +  EM DQG
Sbjct: 628 LIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQG 687

Query: 126 VQPNVVSFNVI-----------------------------------MNELCKNGKMDEAS 150
             P+  +F+++                                   +N LCK G++++A 
Sbjct: 688 FVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAE 747

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            +L   +  G+ PN  +YNT++DG+   G +  A     +ME  G K +  +Y+ LI  +
Sbjct: 748 EILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTF 807

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  ++E A    ++M  KG+ P V  YN L  G    ++ ++ F L  EM+ +G   + 
Sbjct: 808 CELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNV 867

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
            +Y T I+ LCK   ++EA  + R +       ++R YN LIDG C  G+++ A+     
Sbjct: 868 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEE 927

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +  +  ++VTYN +I  L  +GK+ +A D+ L++  K
Sbjct: 928 MFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRK 966



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 176/366 (48%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA LF  LR  G  P+  +   L++ L +T    V +N+F  +   +       +P+  
Sbjct: 500 EAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD------FRPSKF 553

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   I    K   V K  ELF +MK + I+P V  YN LI G C      +A+ LF EM
Sbjct: 554 MYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEM 613

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+++++N +++  CK+G  +++ ++ E M    + P+   +NTL+ G    G V
Sbjct: 614 LARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMV 673

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE +   M+  G   + F++SIL +GY  N + + AL +Y   +  G+K +    + L
Sbjct: 674 EDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSIL 733

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  Q+E+A ++       G+  +   Y T IDG  + G +V A      +     
Sbjct: 734 LNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGM 793

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D  AYNCLI   C+ G ++ A +    +    +   V TYNI+I       + DK  D
Sbjct: 794 KPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 853

Query: 362 LFLDME 367
           L  +ME
Sbjct: 854 LLKEME 859



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 182/365 (49%), Gaps = 7/365 (1%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            +A  +  +++  G  P+ FT++ L +G         AL ++E   +         K N  
Sbjct: 675  DAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSG------LKMNAY 728

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            T + +++ LCKEG ++KA+E+  +   + + PN V YN++I G+    D   A+     M
Sbjct: 729  TCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAM 788

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              QG++P+ +++N ++   C+ G M+ A + +  M   GV P+   YN L+ G+      
Sbjct: 789  EKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEF 848

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            ++  +L   ME  G   NV SY  LIN  CK  ++  A  +  +M  +G+ P+V IYN L
Sbjct: 849  DKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNML 908

Query: 242  FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              G     ++E AF+  +EM + G+  +   Y T IDGL  NG + EA ++   +     
Sbjct: 909  IDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGL 968

Query: 302  ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            + D+  YN LI G   +G ++    L+  +    +   + TY+++I +LC    ++  + 
Sbjct: 969  KPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLI-SLCTKEGIELTKK 1027

Query: 362  LFLDM 366
            +F +M
Sbjct: 1028 IFGEM 1032



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 12/357 (3%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G  PN   YNT+I+G  R G  + A    + M           KP+ + Y  +I   C+ 
Sbjct: 757  GLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG------MKPDHLAYNCLIRTFCEL 810

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            G ++ A++   KMK + ++P+V TYN LI G+    ++++   L  EM D G  PNVVS+
Sbjct: 811  GDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSY 870

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
              ++N LCK  K+ EA  +   M   GV PN  +YN L+DG C  G++  A      M  
Sbjct: 871  GTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFK 930

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             G + N+ +Y+ LI+G   N ++  A  +  E+  KG+KPDV  YN+L  G      V+R
Sbjct: 931  KGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQR 990

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCLI 312
               L++EM+  G+      Y   I  LC      E +EL + +   +  + D+  YN ++
Sbjct: 991  CIALYEEMKTSGIKPTLKTYHLLI-SLCTK----EGIELTKKIFGEMSLQPDLLVYNGVL 1045

Query: 313  DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                  G +  A+ L + +    +  D  TYN +I      GK+ + R L  +M+A+
Sbjct: 1046 HCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAR 1102



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 168/338 (49%), Gaps = 10/338 (2%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G +P+   YN LI   C  G    A    E+  N     GV   P+  TY  +I G  ++
Sbjct: 792  GMKPDHLAYNCLIRTFCELGDMENA----EQEVNKMKLKGV--SPSVETYNILIGGYGRK 845

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               DK  +L  +M+D    PNVV+Y +LI+  C  +   EA+ +  +M D+GV PNV  +
Sbjct: 846  YEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIY 905

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            N++++  C  GK+++A R  E M + G+  N   YNTL+DG  + G++  AE++ + +  
Sbjct: 906  NMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISR 965

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             G K +VF+Y+ LI+GY     ++  ++LY EM + GIKP +  Y+ L I L     +E 
Sbjct: 966  KGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYH-LLISLCTKEGIEL 1024

Query: 254  AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
              K+F EM    +  D   Y   +     +G + +A  L + +      LD   YN LI 
Sbjct: 1025 TKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLIL 1081

Query: 314  GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            G  K G+L     L   +    +  +  TY+I++   C
Sbjct: 1082 GQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHC 1119



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 174/364 (47%), Gaps = 38/364 (10%)

Query: 9    KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
            K+++ G  P+V TYN LI G  R        +L +EM + NG       PN V+Y T+I+
Sbjct: 822  KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMED-NGTM-----PNVVSYGTLIN 875

Query: 69   GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
             LCK   + +A+ +   M+D  ++PNV  YN LI G C      +A     EM  +G++ 
Sbjct: 876  CLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIEL 935

Query: 129  NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
            N+V++N +++ L  NGK+ EA  +L  + + G++P+ F YN+L+ G+   G V R   L+
Sbjct: 936  NLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALY 995

Query: 189  VSMESMGCKHNVFSYSILI---------------------------NG----YCKNKEIE 217
              M++ G K  + +Y +LI                           NG    Y  + +++
Sbjct: 996  EEMKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMD 1055

Query: 218  GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             A +L  +M+ K I  D   YN+L +G  ++ ++     L DEM+   +  +   Y   +
Sbjct: 1056 KAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIV 1115

Query: 278  DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             G C+    + A   +R ++     LD+   + L+ GL +  R K A  +   +  G  +
Sbjct: 1116 KGHCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM-NGRKL 1174

Query: 338  ADVV 341
             DV+
Sbjct: 1175 GDVI 1178



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/294 (26%), Positives = 140/294 (47%), Gaps = 6/294 (2%)

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           L +   + +A +LF  +++E I P+  +   L+        +     +F+ +++   +P+
Sbjct: 492 LNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPS 551

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
              +   +    K   + +   L   M    + P  F+YN L+DG C   ++  AE+LF 
Sbjct: 552 KFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFD 611

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M +     ++ +Y+ LI+GYCK+   E +  +   M +  I+P ++ +NTL  GLF+  
Sbjct: 612 EMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAG 671

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            VE A  +  EM+  G   D + +    DG   N     A+ ++ T   +   L + AY 
Sbjct: 672 MVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYET--AVDSGLKMNAYT 729

Query: 310 C--LIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           C  L++ LCK G+++ A E+  R + +G L+ + V YN MI      G +  AR
Sbjct: 730 CSILLNALCKEGQIEKAEEILGREMAKG-LVPNEVLYNTMIDGYSRKGDLVGAR 782



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/292 (28%), Positives = 137/292 (46%), Gaps = 37/292 (12%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  +   +   G  PNV  YN LI+G C  G    A    EEM     E       N 
Sbjct: 884  LEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIEL------NL 937

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            VTY T+IDGL   G + +A+++ L++  + + P+V TYNSLI G+ +A +      L+ E
Sbjct: 938  VTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEE 997

Query: 121  MMDQGVQPNVVSFNVIMN-------ELCK------------------------NGKMDEA 149
            M   G++P + +++++++       EL K                        +G MD+A
Sbjct: 998  MKTSGIKPTLKTYHLLISLCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKA 1057

Query: 150  SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
              L + MI+  +  +   YN+L+ G    G++     L   M++   +    +Y I++ G
Sbjct: 1058 FNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKG 1117

Query: 210  YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +C+ K+  GA   Y EM  KG+  DV I + L  GL E  + + A  +  EM
Sbjct: 1118 HCEMKDYMGAYVWYREMQEKGLLLDVCIGDELVSGLKEEWRSKEAENVISEM 1169



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 66/277 (23%), Positives = 135/277 (48%), Gaps = 9/277 (3%)

Query: 96  VTYNSLIHGFCY---------ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           ++  SL H F Y         +   +EA  LF  + ++G+ P+  S  ++++ L K  + 
Sbjct: 474 LSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQF 533

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                +   +++   RP+ F+Y   +        V +  ELF  M+       VF Y++L
Sbjct: 534 RVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVL 593

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK ++++ A  L+ EML++ + P ++ YNTL  G  +    E++FK+ + M+   +
Sbjct: 594 IDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNI 653

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                 + T + GL K G + +A  +   ++   +  D   ++ L DG   + +   A  
Sbjct: 654 EPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALG 713

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++ +     L  +  T +I+++ALC +G+++KA ++ 
Sbjct: 714 VYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEIL 750



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 92/187 (49%)

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A +LF ++ + G   +  S ++L++   K K+    ++++  +L    +P   +Y  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                 ++  V +  +LF+ M+   ++   + Y   IDGLCK   + +A +LF  +   +
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
               +  YN LIDG CK G  + ++++   +    +   ++T+N ++  L   G ++ A 
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 361 DLFLDME 367
           ++  +M+
Sbjct: 678 NVLTEMK 684



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 9/181 (4%)

Query: 184 AEELF--VSMESMGCKHNVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            +ELF   S+ S   KH+ FSY   S+L+N   ++K I  A  L+  + ++GI P     
Sbjct: 465 PKELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIFPSSDSL 520

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L   L +  Q      +F  +         + Y   I    K   + + +ELF  ++ 
Sbjct: 521 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 580

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +    +  YN LIDGLCK  ++K A +LF  +    L+  ++TYN +I   C DG  +K
Sbjct: 581 DRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEK 640

Query: 359 A 359
           +
Sbjct: 641 S 641



 Score = 39.3 bits (90), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 46/174 (26%), Positives = 68/174 (39%), Gaps = 16/174 (9%)

Query: 203 YSILING---YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           YS+L +    +   KE+  A SL S  L          Y  L + L E   +  A  LF 
Sbjct: 452 YSLLRSDSAPFTSPKELFSAFSLSSPSLKHDFS-----YLLLSVLLNESKMISEAADLFF 506

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA----YNCLIDGL 315
            ++  G+   + +    +D L K       + +F  L IL  E D R     Y   I   
Sbjct: 507 ALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVF--LNIL--ESDFRPSKFMYGKAIQAA 562

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K   +    ELF  +    +   V  YN++I  LC   +M  A  LF +M A+
Sbjct: 563 VKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLAR 616


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 204/403 (50%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A F  +   GC P V T+NT+IN  C+ G+ + A  LF+    G  E G    PN +
Sbjct: 109 DALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFD----GLKEMGF--SPNAI 162

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG----------------- 104
            Y T+++G  K   +D+A  L+ +M+ + I P+ +T+N L+ G                 
Sbjct: 163 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 222

Query: 105 ------------------FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                              C+A   +EA    ++M+++G+ P++++FN ++    + G  
Sbjct: 223 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 282

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A    +LM+  G+ P+    ++L+ G  + GR+  A EL   M   G   N  ++++L
Sbjct: 283 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 342

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++ + K  ++ GA SL+ EM  +GI PDVV ++    GL +   VE A+ +F EM R G+
Sbjct: 343 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 402

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             + +AY + I G CK G + EA++L + +R      DI   N +I GLCK GR++ A  
Sbjct: 403 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 462

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +F  + +  L  D++TYN +I+  C    M  A +L   M A 
Sbjct: 463 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYAS 505



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 200/392 (51%), Gaps = 45/392 (11%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F CEPN F YN +IN  C  G T  AL  F  M     E G  C P  VT+ T+I+  CK
Sbjct: 85  FHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI----ERG--CNPTVVTFNTVINAFCK 138

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V +A++LF  +K+   +PN + YN+L++G+    + ++A  L+ EM  +G+ P+ ++
Sbjct: 139 EGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGIT 198

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN++++   K G+ ++  RLL+ +  +G+ P+  +++  + G C  GR++ A E  + M 
Sbjct: 199 FNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDML 258

Query: 193 SMGCKHNVFSYSILINGYCK-----------------------------------NKEIE 217
             G   ++ +++ +I  Y +                                   N  ++
Sbjct: 259 EKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQ 318

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ KG+  + + +  L    F+   V  A  L+ EM+R G+  D  A+  FI
Sbjct: 319 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 378

Query: 278 DGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
           DGL K G + EA  +F  L +L+  L  +  AYN LI G CK G+L  A +L + +    
Sbjct: 379 DGLSKQGLVEEAYNVF--LEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRG 436

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L+ D+ T N++I  LC  G+M  A ++F+DM 
Sbjct: 437 LLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 468



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 170/356 (47%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P  +T++ +I G CR G   +  +L   M   +      C+PN   Y  +I+  C  
Sbjct: 51  GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFH------CEPNAFAYNIVINACCIR 104

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A   F  M +   NP VVT+N++I+ FC   +  EA+ LF  + + G  PN + +
Sbjct: 105 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 164

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +MN   K  ++D+A+ L E M + G+ P+   +N L+ G    GR    + L   +  
Sbjct: 165 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 224

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   +   + I ++G C    ++ A+    +ML KG+ P ++ +N++     +    ++
Sbjct: 225 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 284

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF+ +  M   G+        + + GL  NG + EA EL   +      ++  A+  L+D
Sbjct: 285 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 344

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              K G +  A  L+  + R  +  DVV ++  I  L   G +++A ++FL+M  K
Sbjct: 345 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK 400



 Score =  134 bits (337), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 142/273 (52%), Gaps = 6/273 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           FG  P+  T ++L+ GL   G    A  L  +M     E G+    N + +T ++D   K
Sbjct: 295 FGLTPSPSTCSSLLMGLSINGRLQEATELIGQMI----EKGLSV--NNMAFTVLLDKFFK 348

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G V  A+ L+ +M+   I P+VV +++ I G        EA  +F+EM+ +G+ PN  +
Sbjct: 349 RGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFA 408

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N ++   CK GK++EA +L ++M   G+ P+ F  N ++ G C  GR+  A  +F+ M 
Sbjct: 409 YNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 468

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y+ LINGYCK  ++  A +L + M + G  PD+  YN    G     ++ 
Sbjct: 469 QTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMN 528

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           RA  + DE+   G+ + ++A    ++   K+ Y
Sbjct: 529 RAVLMLDELVSAGILSFSFACPPTLNAHTKHFY 561



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/319 (27%), Positives = 151/319 (47%), Gaps = 6/319 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L   + V G  P+   ++  ++GLC  G    A+    +M     E G+   P+ + + +
Sbjct: 218 LLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDML----EKGL--SPSIIAFNS 271

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I    + G  DKA E +  M    + P+  T +SL+ G        EA  L  +M+++G
Sbjct: 272 VIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKG 331

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +  N ++F V++++  K G +  A  L   M + G+ P+   ++  +DG    G V  A 
Sbjct: 332 LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAY 391

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +F+ M   G   N F+Y+ LI G+CK  ++  AL L   M  +G+ PD+   N +  GL
Sbjct: 392 NVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGL 451

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  ++  A  +F +M + G++ D   Y T I+G CK   +V A  L   +       D+
Sbjct: 452 CKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDL 511

Query: 306 RAYNCLIDGLCKSGRLKIA 324
             YN  I G C S R+  A
Sbjct: 512 TTYNIRIHGFCSSRRMNRA 530



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 150/295 (50%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA    M +   G  P++  +N++I    + G    A   ++ M +    FG+   P+T 
Sbjct: 249 EAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVH----FGLTPSPSTC 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +  +++ GL   G + +A EL  +M ++ ++ N + +  L+  F    D   A+ L+ EM
Sbjct: 305 S--SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEM 362

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VV+F+  ++ L K G ++EA  +   M++ G+ PN F YN+L+ GFC  G++
Sbjct: 363 ERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKL 422

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A +L   M   G   ++F+ +++I G CK   +  A++++ +M   G+ PD++ YNTL
Sbjct: 423 NEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTL 482

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             G  +   +  A  L + M   G   D   Y   I G C +  +  AV +   L
Sbjct: 483 INGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDEL 537



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 136/282 (48%)

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A E+  +M++  + P+      L        D+     LF +++ +G QP   +F+ I+
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
              C+ G +     LL LM +    PNAF YN +++  C+ GR + A   F  M   GC 
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             V +++ +IN +CK   +  A  L+  +   G  P+ ++YNTL  G  ++ ++++A  L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           ++EM++ G+A D   +   + G  K G   +   L + + +L    D   ++  + GLC 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +GRL  A E    +    L   ++ +N +I A    G  DKA
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 285



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 121/250 (48%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M + GV+P+     ++   L + G      +L + +I+ G +P  + ++ ++ GFC  G
Sbjct: 11  RMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKG 70

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            ++  E L   M    C+ N F+Y+I+IN  C       AL+ ++ M+ +G  P VV +N
Sbjct: 71  CIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFN 130

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T+     +   V  A KLFD ++  G + +   Y T ++G  K   I +A  L+  +R  
Sbjct: 131 TVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKK 190

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   +N L+ G  K GR +    L + +    L+ D   ++I +  LC  G++D+A
Sbjct: 191 GIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEA 250

Query: 360 RDLFLDMEAK 369
            +  +DM  K
Sbjct: 251 MEFLMDMLEK 260


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/397 (30%), Positives = 199/397 (50%), Gaps = 33/397 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           +A  LF+ ++  GC PNV  +  LI+GLC++G    A  LF+ M                
Sbjct: 156 KALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMI 215

Query: 48  -GNGEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            G  + G +              C P+  TY T+I GLC +   ++A+EL      E   
Sbjct: 216 VGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFT 274

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P VVT+ +LI+G+C A  +++A  +  +MM    + ++  F  ++N L K  ++ EA  L
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  +   G+ PN   Y +++DG+C +G+V+ A E+   ME  GC+ N ++Y+ L+ G  K
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +K++  A++L ++M   GI P+V+ Y TL  G  + H  + AF+LF+ M+++G+  D  A
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHA 454

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y    D LCK G   EA        +    L    Y  LIDG  K+G    A  L   + 
Sbjct: 455 YAVLTDALCKAGRAEEAYSFIVRKGV---ALTKVYYTTLIDGFSKAGNTDFAATLIERMI 511

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                 D  TY++++HALC   ++++A  +   M  +
Sbjct: 512 DEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 548



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 173/362 (47%), Gaps = 7/362 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           ++ +L   G  P+  TYNT+I   C+ G    A   F  +  G  E      P T T   
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLE------PETFTCNA 108

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ G C+ G + KA  LFL M       N  +Y  LI G C A    +A  LF+ M   G
Sbjct: 109 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 168

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             PNV +F  +++ LCK+G++ +A  L + M Q GV P+   YN ++ G+   GR+N A 
Sbjct: 169 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 228

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++   ME  GC  + ++Y+ LI G C  K  E A  L +  + +G  P VV +  L  G 
Sbjct: 229 KIKELMEKNGCHPDDWTYNTLIYGLCDQK-TEEAEELLNNAVKEGFTPTVVTFTNLINGY 287

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               + + A ++ ++M       D   +   I+ L K   + EA EL   +       ++
Sbjct: 288 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 347

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  +IDG CKSG++ IA E+ + + R     +  TYN +++ L  D K+ KA  L   
Sbjct: 348 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTK 407

Query: 366 ME 367
           M+
Sbjct: 408 MQ 409



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 113/374 (30%), Positives = 178/374 (47%), Gaps = 25/374 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  K++  G  PNV TY TL+ G C       A  LFE M   NG      KP+  
Sbjct: 400 KAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFE-MMEQNG-----LKPDEH 453

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  + D LCK G  ++A    ++   + +    V Y +LI GF  A + + A  L   M
Sbjct: 454 AYAVLTDALCKAGRAEEAYSFIVR---KGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 510

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G  P+  +++V+++ LCK  +++EA  +L+ M   G++   F Y  L+D     G+ 
Sbjct: 511 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKH 570

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ ++  M S G K +  +Y++ IN YCK   +E A  L  +M  +G+ PDVV YN L
Sbjct: 571 DHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNIL 630

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN--GYIVEA--------VE 291
             G   +  ++RAF     M       + W Y   +  L K    Y+           +E
Sbjct: 631 IDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIE 690

Query: 292 LFRTL----RILKYELD--IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           L  T     R++K+ L+  +  Y+ LI G CK+GRL+ A  L   +    L  +   Y +
Sbjct: 691 LDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTL 750

Query: 346 MIHALCADGKMDKA 359
           +I   C     +KA
Sbjct: 751 LIKCCCDTKFFEKA 764



 Score =  160 bits (405), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 206/484 (42%), Gaps = 126/484 (26%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  PNV TY ++I+G C++G   +AL + + M          C+PN  
Sbjct: 330 EAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDG------CQPNAW 383

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++ GL K+  + KA  L  KM+ + I PNV+TY +L+ G C  +D++ A  LF EM
Sbjct: 384 TYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLF-EM 442

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEA------------------------------- 149
           M+Q G++P+  ++ V+ + LCK G+ +EA                               
Sbjct: 443 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDF 502

Query: 150 -SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
            + L+E MI  G  P+++ Y+ L+   C   R+N A  +   M   G K  +F+Y+ILI+
Sbjct: 503 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILID 562

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
              +  + + A  +Y+EM S G KP    Y        +  ++E A  L  +M+R GVA 
Sbjct: 563 EMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAP 622

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTL-------------------------------- 296
           D   Y   IDG    GYI  A    + +                                
Sbjct: 623 DVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDT 682

Query: 297 -----------------RILKYELD--IRAYNCLIDGLCKSGRLKIAWELF--------- 328
                            R++K+ L+  +  Y+ LI G CK+GRL+ A  L          
Sbjct: 683 SGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLS 742

Query: 329 --------------------RSLPRGVLIAD------VVTYNIMIHALCADGKMDKARDL 362
                               ++L    ++++      + +Y +++  LC +G  +K + L
Sbjct: 743 PNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSL 802

Query: 363 FLDM 366
           F D+
Sbjct: 803 FCDL 806



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 162/364 (44%), Gaps = 22/364 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L  ++   GC P+ +TY+ L++ LC+      AL + ++M+      G+ C      
Sbjct: 503 AATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMS----LRGIKC--TIFA 556

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +ID + +EG  D AK ++ +M      P+  TY   I+ +C      +A+ L ++M 
Sbjct: 557 YTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKME 616

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC------ 176
            +GV P+VV++N++++     G +D A   L+ M+     PN + Y  L+          
Sbjct: 617 REGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAY 676

Query: 177 -----LTGRVNRAE-----ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                 +G  N  E     +L   M   G    V +YS LI G+CK   +E A  L   M
Sbjct: 677 VRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHM 736

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             KG+ P+  IY  L     +    E+A      M   G      +YR  + GLC  G  
Sbjct: 737 CGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDF 796

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +   LF  L  L Y  D  A+  L DGL K+G + I +++   + +        TY ++
Sbjct: 797 EKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 856

Query: 347 IHAL 350
            + +
Sbjct: 857 TNKM 860



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 141/301 (46%), Gaps = 22/301 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++ + G +  +F Y  LI+ + R G    A  ++ EM +         KP+  
Sbjct: 537 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH------KPSAT 590

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT  I+  CKEG ++ A++L LKM+ E + P+VVTYN LI G  +    + A      M
Sbjct: 591 TYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRM 650

Query: 122 MDQGVQPNVVSFNVIMNELCKNG----------------KMDEASRLLELMIQIGVRPNA 165
           +    +PN  ++ +++  L K                  ++D   +LLE M++ G+ P  
Sbjct: 651 VGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTV 710

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y++L+ GFC  GR+  A  L   M   G   N   Y++LI   C  K  E ALS  S 
Sbjct: 711 TTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSI 770

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M   G +P +  Y  L +GL      E+   LF ++   G   D  A++   DGL K GY
Sbjct: 771 MSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGY 830

Query: 286 I 286
           +
Sbjct: 831 V 831



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 105/241 (43%), Gaps = 22/241 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L +K+   G  P+V TYN LI+G    G+   A +  + M       G  C+PN  
Sbjct: 607 DAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV------GASCEPNYW 660

Query: 62  TYTTIIDGLCKEGF----------------VDKAKELFLKMKDENINPNVVTYNSLIHGF 105
           TY  ++  L K                   +D   +L  +M    +NP V TY+SLI GF
Sbjct: 661 TYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGF 720

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C A    EA  L   M  +G+ PN   + +++   C     ++A   + +M + G +P  
Sbjct: 721 CKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQL 780

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y  L+ G C  G   + + LF  +  +G  H+  ++ IL +G  K   ++    + S 
Sbjct: 781 ESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQMLSI 840

Query: 226 M 226
           M
Sbjct: 841 M 841


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 204/403 (50%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A F  +   GC P V T+NT+IN  C+ G+ + A  LF+    G  E G    PN +
Sbjct: 319 DALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFD----GLKEMGF--SPNAI 372

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG----------------- 104
            Y T+++G  K   +D+A  L+ +M+ + I P+ +T+N L+ G                 
Sbjct: 373 MYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDI 432

Query: 105 ------------------FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                              C+A   +EA    ++M+++G+ P++++FN ++    + G  
Sbjct: 433 SVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLE 492

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D+A    +LM+  G+ P+    ++L+ G  + GR+  A EL   M   G   N  ++++L
Sbjct: 493 DKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVL 552

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++ + K  ++ GA SL+ EM  +GI PDVV ++    GL +   VE A+ +F EM R G+
Sbjct: 553 LDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGL 612

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             + +AY + I G CK G + EA++L + +R      DI   N +I GLCK GR++ A  
Sbjct: 613 IPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAIN 672

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +F  + +  L  D++TYN +I+  C    M  A +L   M A 
Sbjct: 673 VFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYAS 715



 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 200/392 (51%), Gaps = 45/392 (11%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F CEPN F YN +IN  C  G T  AL  F  M     E G  C P  VT+ T+I+  CK
Sbjct: 295 FHCEPNAFAYNIVINACCIRGRTSDALAWFNLMI----ERG--CNPTVVTFNTVINAFCK 348

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V +A++LF  +K+   +PN + YN+L++G+    + ++A  L+ EM  +G+ P+ ++
Sbjct: 349 EGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGIT 408

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN++++   K G+ ++  RLL+ +  +G+ P+  +++  + G C  GR++ A E  + M 
Sbjct: 409 FNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDML 468

Query: 193 SMGCKHNVFSYSILINGYCK-----------------------------------NKEIE 217
             G   ++ +++ +I  Y +                                   N  ++
Sbjct: 469 EKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQ 528

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L  +M+ KG+  + + +  L    F+   V  A  L+ EM+R G+  D  A+  FI
Sbjct: 529 EATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFI 588

Query: 278 DGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
           DGL K G + EA  +F  L +L+  L  +  AYN LI G CK G+L  A +L + +    
Sbjct: 589 DGLSKQGLVEEAYNVF--LEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRG 646

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L+ D+ T N++I  LC  G+M  A ++F+DM 
Sbjct: 647 LLPDIFTTNMIIGGLCKQGRMRSAINVFMDMH 678



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 170/356 (47%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P  +T++ +I G CR G   +  +L   M   +      C+PN   Y  +I+  C  
Sbjct: 261 GPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFH------CEPNAFAYNIVINACCIR 314

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A   F  M +   NP VVT+N++I+ FC   +  EA+ LF  + + G  PN + +
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMY 374

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +MN   K  ++D+A+ L E M + G+ P+   +N L+ G    GR    + L   +  
Sbjct: 375 NTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISV 434

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   +   + I ++G C    ++ A+    +ML KG+ P ++ +N++     +    ++
Sbjct: 435 LGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDK 494

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF+ +  M   G+        + + GL  NG + EA EL   +      ++  A+  L+D
Sbjct: 495 AFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLD 554

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              K G +  A  L+  + R  +  DVV ++  I  L   G +++A ++FL+M  K
Sbjct: 555 KFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRK 610



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 145/300 (48%), Gaps = 6/300 (2%)

Query: 65  TIIDGLCKEGFVD-----KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +++D L +  FV+     +A E+  +M++  + P+      L        D+     LF 
Sbjct: 197 SVLDSLMR-AFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFK 255

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +++ +G QP   +F+ I+   C+ G +     LL LM +    PNAF YN +++  C+ G
Sbjct: 256 DVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRG 315

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R + A   F  M   GC   V +++ +IN +CK   +  A  L+  +   G  P+ ++YN
Sbjct: 316 RTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYN 375

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  G  ++ ++++A  L++EM++ G+A D   +   + G  K G   +   L + + +L
Sbjct: 376 TLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVL 435

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   ++  + GLC +GRL  A E    +    L   ++ +N +I A    G  DKA
Sbjct: 436 GLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKA 495



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 130/271 (47%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           +SL+  F  A    +A  +   M + GV+P+     ++   L + G      +L + +I+
Sbjct: 200 DSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIR 259

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G +P  + ++ ++ GFC  G ++  E L   M    C+ N F+Y+I+IN  C       
Sbjct: 260 RGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSD 319

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL+ ++ M+ +G  P VV +NT+     +   V  A KLFD ++  G + +   Y T ++
Sbjct: 320 ALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMN 379

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G  K   I +A  L+  +R      D   +N L+ G  K GR +    L + +    L+ 
Sbjct: 380 GYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLP 439

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D   ++I +  LC  G++D+A +  +DM  K
Sbjct: 440 DRSLFDISVSGLCWAGRLDEAMEFLMDMLEK 470



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 75/144 (52%), Gaps = 9/144 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
            A  +FM +   G  P++ TYNTLING C+    + A NL   M A+G+        P+ 
Sbjct: 669 SAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGS-------NPDL 721

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY   I G C    +++A  +  ++    I PN VTYNS+++G C ++  + A  L   
Sbjct: 722 TTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVC-SDILDRAMILTAR 780

Query: 121 MMDQGVQPNVVSFNVIMNELCKNG 144
           ++     PNVV+ N+++++  K G
Sbjct: 781 LLKMAFVPNVVTANLLLSQFYKQG 804


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  199 bits (506), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 186/385 (48%), Gaps = 31/385 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           E   +F +++   C+P+V TYN LIN  C+      A     EM ANG        KPN 
Sbjct: 109 ECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANG-------LKPNV 161

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T ID  CKEG + +A + F+ M+   + PN  TY SLI   C A +  EA  L  E
Sbjct: 162 VTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEE 221

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++  G++ NVV++  +++ LC+ G+M EA  +   M+  GV PN   Y  L+ GF     
Sbjct: 222 ILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKE 281

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A+++   M+    K ++  Y  ++ G C    +E A  L  E+   GI  + VIY T
Sbjct: 282 MEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTT 341

Query: 241 LFIGLFEIHQVERAF-----------------------KLFDEMQRHGVAADTWAYRTFI 277
           L    F+  Q   A                        KLFDEM   G+  D  AY   I
Sbjct: 342 LMDAYFKSGQATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALI 401

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           DG  K+G + EA+ L   +  +  ELD+ AY  LI GL  SG+++ A  L   +    ++
Sbjct: 402 DGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL 461

Query: 338 ADVVTYNIMIHALCADGKMDKARDL 362
            D V Y  +I    A GK+D+A +L
Sbjct: 462 PDEVVYMCLIKKYYALGKVDEALEL 486



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+  F+K+R F   P   + N L++ L + G   ++   F++M    G  G+  K +  
Sbjct: 4   EASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDM----GAAGI--KRSVF 57

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LCKEG ++ A+ LF +MK+    P++VTYNSLI G       +E  C+F +M
Sbjct: 58  TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D    P+V+++N ++N  CK  +M +A   L  M   G++PN   Y+T +D FC  G +
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A + FV M  +    N F+Y+ LI+  CK   +  AL L  E+L  GIK +VV Y  L
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL E  +++ A ++F  M   GVA +   Y   + G  K   +  A ++ + ++    
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y  ++ GLC   RL+ A  L   +    +  + V Y  ++ A    G+  +A  
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357

Query: 362 LFLDM 366
           L  +M
Sbjct: 358 LLEEM 362



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 159/294 (54%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +++A E FLKM+   + P   + N+L+H        + ++  F +M   G++ +V ++N+
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCK G ++ A  L   M + G  P+   YN+L+DG    G ++    +F  M+   
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  +V +Y+ LIN +CK + +  A     EM + G+KP+VV Y+T      +   ++ A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           K F +M+R  +  + + Y + ID  CK G + EA++L   +     +L++  Y  L+DGL
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C+ GR+K A E+FR++    +  +  TY  ++H      +M+ A+D+  +M+ K
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 295


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/359 (32%), Positives = 177/359 (49%), Gaps = 39/359 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++   GC PNVF+YN L+ GLC    +  AL L + M +  G+    C P+ V+YTT
Sbjct: 149 VLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVSYTT 204

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G  KEG +DKA   + +M D  I PNVVTY+S+I   C A   ++A  +   M+  G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN  ++N I++  C +G+  EA   L+ M   GV P+   YN+LMD  C  GR   A 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F SM   G K  + +Y  L+ GY     +     L   M+  GI P+  +++ L    
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAY 384

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +V++A  +F +M++ G+  DT  Y T I  LCK+G + +A+  F            
Sbjct: 385 AKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQ---------- 434

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
                +ID     G                     + YN +IH+LC   K DKA+D FL
Sbjct: 435 -----MIDERLSPGN--------------------IVYNSLIHSLCIFDKWDKAKDYFL 468



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 167/357 (46%), Gaps = 17/357 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP----NTVTYTTIIDGLCK 72
           PN+ TY  LI   C  G     L+L      G    G V K     + + +T ++ GLC 
Sbjct: 89  PNLCTYGILIGSCCCAGR----LDL------GFAALGNVIKKGFRVDAIAFTPLLKGLCA 138

Query: 73  EGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG--VQPN 129
           +     A ++ L+ M      PNV +YN L+ G C  N   EA  L   M D G    P+
Sbjct: 139 DKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPD 198

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VVS+  ++N   K G +D+A      M+  G+ PN   Y++++   C    +++A E+  
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           SM   G   N  +Y+ +++GYC + + + A+    +M S G++PDVV YN+L   L +  
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +   A K+FD M + G+  +   Y T + G    G +VE   L   +       +   ++
Sbjct: 319 RCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFS 378

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            LI    K G++  A  +F  + +  L  D VTY  +I  LC  G+++ A   F  M
Sbjct: 379 ILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQM 435



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 137/271 (50%), Gaps = 3/271 (1%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + + PN+ TY  LI   C A   +        ++ +G + + ++F  ++  LC + +  +
Sbjct: 85  DEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSD 144

Query: 149 ASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYSI 205
           A  + L  M Q+G  PN F YN L+ G C   R   A EL   M   G  C  +V SY+ 
Sbjct: 145 AMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTT 204

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +ING+ K  +++ A   Y EML +GI P+VV Y+++   L +   +++A ++   M ++G
Sbjct: 205 VINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNG 264

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V  +   Y + + G C +G   EA+   + +     E D+  YN L+D LCK+GR   A 
Sbjct: 265 VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEAR 324

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           ++F S+ +  L  ++ TY  ++      G +
Sbjct: 325 KMFDSMTKRGLKPEITTYGTLLQGYATKGAL 355



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 7/371 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G   +++  N  +  + R      A++ +  MA    +      PN  
Sbjct: 37  DARHVFDELLRRGRGASIYGLNCALADVARHSPA-AAVSRYNRMARAGAD---EVTPNLC 92

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I   C  G +D        +  +    + + +  L+ G C     ++A  + +  
Sbjct: 93  TYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 152

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDGFCLT 178
           M Q G  PNV S+N+++  LC   +  EA  LL++M   G    P+   Y T+++GF   
Sbjct: 153 MTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKE 212

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +++A   +  M   G   NV +YS +I   CK + ++ A+ + + M+  G+ P+   Y
Sbjct: 213 GDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTY 272

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++  G     Q + A     +M   GV  D   Y + +D LCKNG   EA ++F ++  
Sbjct: 273 NSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +I  Y  L+ G    G L     L   + R  +  +   ++I+I A    GK+D+
Sbjct: 333 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQ 392

Query: 359 ARDLFLDMEAK 369
           A  +F  M  +
Sbjct: 393 AMLVFSKMRQQ 403



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 6/188 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+   G EP+V TYN+L++ LC+ G    A  +F+ M           KP   
Sbjct: 287 EAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRG------LKPEIT 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+PN   ++ LI  +      ++A  +F +M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ P+ V++  ++  LCK+G++++A R  E MI   + P   VYN+L+   C+  + 
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 182 NRAEELFV 189
           ++A++ F+
Sbjct: 461 DKAKDYFL 468



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 6/107 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN + ++ LI    + G    A+ +F +M            P+TVTY T+I  LCK 
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPDTVTYGTVIGILCKS 422

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           G V+ A   F +M DE ++P  + YNSLIH  C  + W++AK  F++
Sbjct: 423 GRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFLK 469


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 187/353 (52%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P + T+NT+++  C+ G    A+ + + M      FG  C PN V+Y  +++GL  +G  
Sbjct: 205 PTIVTFNTMMDSRCKEGEVGRAVEVLDVMR----MFG--CDPNDVSYNVLVNGLSGKGEF 258

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+AKEL  +M    +  +  TYN LI GFC    + EA  L  EM+ +G  P VV++N I
Sbjct: 259 DRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTI 318

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           M  LC+ G++ +A R L++M+   + P+   YNTL+ G+   G    A  LF  + S   
Sbjct: 319 MYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNL 378

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y+ LI+G C+   ++ A  +  +M+  G+ PDVV +  L  G  ++  +  A +
Sbjct: 379 VPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKE 438

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LFDEM   G+  D  AY T I G  K G   +A  +   ++   +  D+  YN LI+GLC
Sbjct: 439 LFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLC 498

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G    A EL + +    ++ D VTY  +IHA    G + KA ++F DM  K
Sbjct: 499 KLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKK 551



 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 193/389 (49%), Gaps = 29/389 (7%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA---------NGNGEFGVVCK--- 57
           +R+FGC+PN  +YN L+NGL   G    A  L E+M+           N      CK   
Sbjct: 233 MRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEM 292

Query: 58  -----------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS 100
                            P  VTY TI+  LC+ G V  A+     M +E++ P++V+YN+
Sbjct: 293 FEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNT 352

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           LI+G+    ++ EA  LF E+  + + P+VV++N +++  C+ G +D A  + + MI+ G
Sbjct: 353 LIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG 412

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + P+   +  L+ GFC  G +  A+ELF  M S G K +  +Y+  I G  K      A 
Sbjct: 413 LCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAF 472

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  EM ++G  PD++ YN L  GL ++   + A +L  +M+  G+  D   Y + I   
Sbjct: 473 GMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAH 532

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
             +G + +A E+F  +        +  Y  LI      GRL  A + F  +    +  +V
Sbjct: 533 LISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNV 592

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +TYN +I+ LC +  MD A +LF +ME+K
Sbjct: 593 ITYNALIYGLCKENMMDVAYNLFAEMESK 621



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 185/335 (55%), Gaps = 7/335 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +LR     P+V TYNTLI+G CRTG+  +A  + ++M         +C P+ V
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHG-----LC-PDVV 418

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T ++ G C+ G +  AKELF +M    + P+ + Y + I G     + ++A  +  EM
Sbjct: 419 TFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEM 478

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+++++NV++N LCK G  D+A+ L++ M   G+ P+   Y +++    ++G +
Sbjct: 479 KAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLL 538

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +AEE+F  M   G   +V +Y++LI+ Y     ++ A   + EM  KG+ P+V+ YN L
Sbjct: 539 RKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNAL 598

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + + ++ A+ LF EM+  GV+ + + Y   I+      Y  +A++L++ +   + 
Sbjct: 599 IYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREI 658

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           + D   ++ L+  L K  +L +A     +LP  ++
Sbjct: 659 KPDSCTHSALMKHLSKDYKL-LAVLRLENLPLAIV 692



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 164/321 (51%), Gaps = 4/321 (1%)

Query: 53  GVVCKPNTVTYTTIIDGL----CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 108
           G+ C  N+     ++D L     K+  ++K   +F KM +  + P+V   N ++      
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDK 185

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           +  NE + ++  M+   ++P +V+FN +M+  CK G++  A  +L++M   G  PN   Y
Sbjct: 186 SMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSY 245

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L++G    G  +RA+EL   M  +G K +  +Y+ LI G+CK +  E A  L  EML 
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +G  P VV YNT+   L  + +V  A +  D M    +  D  +Y T I G  + G   E
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A+ LF  LR       +  YN LIDG C++G L IA  +   + +  L  DVVT+ I++ 
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425

Query: 349 ALCADGKMDKARDLFLDMEAK 369
             C  G +  A++LF +M ++
Sbjct: 426 GFCQMGNLPMAKELFDEMLSR 446



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 154/310 (49%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P  VT+ T++D  CKEG V +A E+   M+    +PN V+YN L++G     +++ AK 
Sbjct: 204 RPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKE 263

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +M   G++ +  ++N ++   CK    +EA+ L   M+  G  P    YNT+M   C
Sbjct: 264 LIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLC 323

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GRV+ A      M +     ++ SY+ LI GY +      AL L+SE+ SK + P VV
Sbjct: 324 RLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVV 383

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YNTL  G      ++ A  + D+M +HG+  D   +   + G C+ G +  A ELF  +
Sbjct: 384 TYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEM 443

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D  AY   I G  K G    A+ +   +       D++TYN++I+ LC  G  
Sbjct: 444 LSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNF 503

Query: 357 DKARDLFLDM 366
           D A +L   M
Sbjct: 504 DDANELVQKM 513


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 191/367 (52%), Gaps = 6/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF ++   G  PN  TY TLI+ L +      +L L  EM +     GVV   + V
Sbjct: 310 EAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVS----RGVVM--DLV 363

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++D L KEG +++AK++    + +NI PN VTY  L+   C A + + A+ + ++M
Sbjct: 364 MYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQM 423

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ V PNVV+F+ I+N L K G + +A+  +  M   G+ PN   Y TL+DGF      
Sbjct: 424 EEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQ 483

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +++  M   G + N F    L+NG  KN  IEGA +L+ +M  +G+  D V Y TL
Sbjct: 484 EAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTL 543

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+   +  AFK+  E+    ++ D   Y  FI+ LC  G   EA    + +R    
Sbjct: 544 MDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGL 603

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E D   YN +I   C+ G+   A +L + + R  +  +++TY  ++  L   G + KA+ 
Sbjct: 604 EPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKF 663

Query: 362 LFLDMEA 368
           L  +M +
Sbjct: 664 LLNEMAS 670



 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 184/359 (51%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           +++  G EPNV TY  LI   C+      A +L+E M       GV+  P+ VT + ++D
Sbjct: 247 RMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRS----GVL--PDVVTLSALVD 300

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC++G   +A  LF +M    + PN VTY +LI     A   +E+  L  EM+ +GV  
Sbjct: 301 GLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVVM 360

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           ++V +  +M+ L K GK++EA  +L       + PN   Y  L+D  C  G ++ AE++ 
Sbjct: 361 DLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVL 420

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
           + ME      NV ++S +ING  K   +  A     +M   GI P+VV Y TL  G F+ 
Sbjct: 421 LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKF 480

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
              E A  ++ +M   GV A+ +   + ++GL KNG I  A  LF+ +      LD   Y
Sbjct: 481 QGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNY 540

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L+DGL K+G +  A+++ + L    L  D V YN+ I+ LC  GK  +A+    +M 
Sbjct: 541 TTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMR 599



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/365 (28%), Positives = 165/365 (45%), Gaps = 41/365 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +   ++R  G EP+  TYNT+I   CR G T  AL L +EM   +       KPN +
Sbjct: 590 EAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNS------IKPNLI 643

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT------------------------ 97
           TYTT++ GL + G V KAK L  +M      P  +T                        
Sbjct: 644 TYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELM 703

Query: 98  -----------YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                      YN+L+H  C       A  +  EM+ +G+ P+ ++FN ++   CK+  +
Sbjct: 704 MGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHL 763

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A  +   M+  G+ PN   +NTL+ G    GR+  A+ +   M+ +G + N  +Y IL
Sbjct: 764 DNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDIL 823

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + GY K      AL LY EM+SKG  P    YN+L     +   + +A +LF EM+R GV
Sbjct: 824 VTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGV 883

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
              +  Y   ++G  K    +E   L + ++ L ++      + +     + G    A  
Sbjct: 884 LHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARR 943

Query: 327 LFRSL 331
           L ++L
Sbjct: 944 LLKTL 948



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 170/346 (49%), Gaps = 4/346 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T +T + GLCRTG    A  L E +  G G  G+    + V +  +IDG CK   +  A 
Sbjct: 152 TVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGL----DVVGWNALIDGYCKVQDMAAAL 207

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            +  +M  + +  +VV YNSL+ GF ++ D + A  +   M   GV+PNVV++  ++ E 
Sbjct: 208 AVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEY 267

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK   MDEA  L E M++ GV P+    + L+DG C  G+ + A  LF  M+ +G   N 
Sbjct: 268 CKGKGMDEAFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNH 327

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y  LI+   K +    +L L  EM+S+G+  D+V+Y  L   L +  ++E A  +   
Sbjct: 328 VTYCTLIDSLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRH 387

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
            Q   +  +   Y   +D  C+ G I  A ++   +       ++  ++ +I+GL K G 
Sbjct: 388 AQSDNITPNFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGC 447

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L  A +  R +    +  +VVTY  +I         + A D++ DM
Sbjct: 448 LGKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDM 493



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 6/352 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+   YN  IN LC  G    A +  +EM N   E      P+  TY T+I   C+EG 
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLE------PDQATYNTMIAARCREGK 622

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             KA +L  +MK  +I PN++TY +L+ G   A    +AK L  EM   G  P  ++   
Sbjct: 623 TSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQR 682

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++     + + D    + ELM+  G+  +  VYNTL+   C  G    A  +   M + G
Sbjct: 683 VLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRG 742

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +  +++ LI G+CK+  ++ A ++Y++ML +G+ P++  +NTL  GL    ++  A 
Sbjct: 743 IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEAD 802

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +  +M++ G+  +   Y   + G  K    VEA+ L+  +    +      YN L+   
Sbjct: 803 TVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDF 862

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            K+G +  A ELF  + R  ++    TY+I+++         + R L  DM+
Sbjct: 863 AKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMK 914



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 162/338 (47%), Gaps = 6/338 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TY  L++  CR G+   A  +  +M     E  V+  PN VT+++II+GL K G +
Sbjct: 395 PNFVTYTVLVDAHCRAGNIDGAEQVLLQME----EKSVI--PNVVTFSSIINGLVKRGCL 448

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA +   KMKD  I PNVVTY +LI GF        A  ++ +M+ +GV+ N    + +
Sbjct: 449 GKAADYMRKMKDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSL 508

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N L KNG ++ A  L + M + G+  +   Y TLMDG   TG +  A ++   +     
Sbjct: 509 VNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNL 568

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +   Y++ IN  C   +   A S   EM + G++PD   YNT+        +  +A K
Sbjct: 569 SPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALK 628

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  EM+R+ +  +   Y T + GL + G + +A  L   +    +      +  ++    
Sbjct: 629 LLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACS 688

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            S R  +  E+   +    L AD+  YN ++H LC  G
Sbjct: 689 GSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHG 726



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 184/357 (51%), Gaps = 8/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E N F  ++L+NGL + G+   A  LF++M     E G++   + V YTT++DGL K 
Sbjct: 497 GVEANNFVVDSLVNGLRKNGNIEGAEALFKDM----DERGLLL--DHVNYTTLMDGLFKT 550

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A ++  ++ ++N++P+ V YN  I+  C    ++EAK    EM + G++P+  ++
Sbjct: 551 GNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATY 610

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++   C+ GK  +A +LL+ M +  ++PN   Y TL+ G    G V +A+ L   M S
Sbjct: 611 NTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMAS 670

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G      ++  ++     ++  +  L ++  M+  G+  D+ +YNTL + +   H + R
Sbjct: 671 AGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTL-VHVLCCHGMAR 729

Query: 254 -AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  + DEM   G+A DT  +   I G CK+ ++  A  ++  +       +I  +N L+
Sbjct: 730 NATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLL 789

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            GL  +GR+  A  +   + +  L  + +TY+I++          +A  L+ +M +K
Sbjct: 790 GGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK 846



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 142/316 (44%), Gaps = 37/316 (11%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           +  + V+YN  +           A  +  EM  +GV  + V+ +  +  LC+ G + EA+
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 151 RLLELMIQ-------------------------------------IGVRPNAFVYNTLMD 173
            L E++++                                      GV  +   YN+L+ 
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GF  +G  + A E+   M++ G + NV +Y+ LI  YCK K ++ A SLY  M+  G+ P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV  + L  GL    Q   A+ LF EM + GVA +   Y T ID L K     E++ L 
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLL 350

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +      +D+  Y  L+D L K G+++ A ++ R      +  + VTY +++ A C  
Sbjct: 351 GEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRA 410

Query: 354 GKMDKARDLFLDMEAK 369
           G +D A  + L ME K
Sbjct: 411 GNIDGAEQVLLQMEEK 426



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 80/158 (50%), Gaps = 6/158 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   ++  G EPN  TY+ L+ G  +  + + AL L+ EM +     G +  P   
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSK----GFI--PKAS 853

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++    K G +++AKELF +MK   +     TY+ L++G+    +  E + L  +M
Sbjct: 854 TYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDM 913

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            + G +P+  + + +     + G   EA RLL+ + ++
Sbjct: 914 KELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFKV 951



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 6/176 (3%)

Query: 199 NVFSYSILINGYCKNKEIEGALSLY----SEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           +  + + +I  YC  + +  ALSL            +  D V YN     L E      A
Sbjct: 75  DTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHGRLA 134

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY--ELDIRAYNCLI 312
             +  EM + GV+ D     T + GLC+ G + EA  L   L   +    LD+  +N LI
Sbjct: 135 PPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGRGIDGLDVVGWNALI 194

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           DG CK   +  A  +   +    +  DVV YN ++      G  D A ++   M+A
Sbjct: 195 DGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADAALEVVERMKA 250


>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 456

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/370 (33%), Positives = 195/370 (52%), Gaps = 12/370 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++ V G EPN+ T N LIN  C  G    + ++  ++        +  +PNT+T
Sbjct: 71  AISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSVLGKI------LKLGYQPNTIT 124

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL--FIE 120
            TT++ GLC +G V K+     K+  +    N V+Y +L++G C      E +C   F+ 
Sbjct: 125 LTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLC---KIGETRCAIKFLR 181

Query: 121 MM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+ D     NVV +N I++ LCK+  ++EA      M   G+ PN   Y TL+ GFCL G
Sbjct: 182 MIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVITYTTLIGGFCLAG 241

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  A  L   M       NV++Y+ILI+  CK  +++ A +L +EM  +G   DVV Y 
Sbjct: 242 QLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYT 301

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  G  +   +++A  LF +M+  G+  + + Y   IDGLCK G + +A +LF+ L + 
Sbjct: 302 SLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVK 361

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +D+  YN +I GLCK G L  A  +   +     I +VVT+ I+I +L    + DKA
Sbjct: 362 GCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKA 421

Query: 360 RDLFLDMEAK 369
             L  +M AK
Sbjct: 422 EKLLHEMIAK 431



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 182/366 (49%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F  + +    P +  +  ++  L +  H   A++L ++M     E      PN V
Sbjct: 35  DAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIE------PNLV 88

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +I+  C  G +  +  +  K+      PN +T  +L+ G C   +  ++     ++
Sbjct: 89  TLNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKV 148

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG Q N VS+  ++N LCK G+   A + L ++       N  +YNT++DG C    V
Sbjct: 149 VAQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLV 208

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A + +  M + G   NV +Y+ LI G+C   ++ GA SL +EM+ K I P+V  Y  L
Sbjct: 209 NEAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAIL 268

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V+ A  L  EM   G  AD   Y + +DG CKN  + +A  LF  ++    
Sbjct: 269 IDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGI 328

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +   Y  LIDGLCK GRLK A +LF+ L       DV TYN+MI  LC +G +D+A  
Sbjct: 329 QPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALA 388

Query: 362 LFLDME 367
           +   ME
Sbjct: 389 IKSKME 394



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/312 (30%), Positives = 151/312 (48%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  V +  I+  L K      A  L  +M+ + I PN+VT N LI+ FC+    + +  +
Sbjct: 50  PPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFCHLGQMSFSFSV 109

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QPN ++   +M  LC  G++ ++    + ++  G + N   Y TL++G C 
Sbjct: 110 LGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVSYGTLLNGLCK 169

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +    +E      NV  Y+ +I+G CK+K +  A   YSEM ++GI P+V+ 
Sbjct: 170 IGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMNARGIFPNVIT 229

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G     Q+  AF L +EM    +  + + Y   ID LCK G + EA  L   + 
Sbjct: 230 YTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMH 289

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  Y  L+DG CK+  L  A  LF  +    +  +  TY  +I  LC  G++ 
Sbjct: 290 YRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLK 349

Query: 358 KARDLFLDMEAK 369
            A+ LF D+  K
Sbjct: 350 DAQKLFQDLLVK 361



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 12/276 (4%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV  YNT+I+GLC+      A + + EM N  G F     PN +TYTT+I G C  G + 
Sbjct: 191 NVVMYNTIIDGLCKDKLVNEAYDFYSEM-NARGIF-----PNVITYTTLIGGFCLAGQLT 244

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A  L  +M  +NINPNV TY  LI   C      EAK L  EM  +G   +VV++  ++
Sbjct: 245 GAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLL 304

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CKN  +D+A+ L   M + G++PN + Y  L+DG C  GR+  A++LF  +   GC 
Sbjct: 305 DGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCC 364

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +V +Y+++I G CK   ++ AL++ S+M   G  P+VV +  +   LF+  + ++A KL
Sbjct: 365 IDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKL 424

Query: 258 FDEMQRHGVAADTWAYRTF--IDGLCKNGYIVEAVE 291
             EM    +A     +R F  I+ L    Y+  + E
Sbjct: 425 LHEM----IAKGLLRFRNFHEIEDLKPTAYLFASSE 456



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/295 (29%), Positives = 141/295 (47%)

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +  VD A   F  M   +  P +V +  ++        ++ A  L  +M  +G++PN+V+
Sbjct: 30  DNVVDDAISQFNGMLLMHHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVT 89

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            N+++N  C  G+M  +  +L  ++++G +PN     TLM G CL G V ++      + 
Sbjct: 90  LNILINCFCHLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVV 149

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           + G + N  SY  L+NG CK  E   A+     +       +VV+YNT+  GL +   V 
Sbjct: 150 AQGFQMNQVSYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVN 209

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A+  + EM   G+  +   Y T I G C  G +  A  L   + +     ++  Y  LI
Sbjct: 210 EAYDFYSEMNARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILI 269

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           D LCK G++K A  L   +      ADVVTY  ++   C +  +DKA  LF+ M+
Sbjct: 270 DALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMK 324


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  199 bits (505), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 193/395 (48%), Gaps = 33/395 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   GCEPN +++  L+ G CR G T   L L  EM        +   PN V
Sbjct: 74  DARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRR------LGFSPNKV 127

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I   CKEG  D A++L  +M+ + ++P+VVT+N+ I   C +    EA  +F +M
Sbjct: 128 VYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDM 187

Query: 122 MDQGV----QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
               V    QPN++++N+++   CK G ++EA  L E M       N   YN  + G   
Sbjct: 188 QIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVR 247

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++  A+ +   M  MG + NV+SY+I+++G CKN  +  A  L   M S G+ PD V 
Sbjct: 248 IGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVT 307

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL  G     +V  A  +  EM R G + + +     +  L K G I EA EL + + 
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-----------------------PRG 334
              Y +D    N +IDGLC +G+L  A E+   +                        R 
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + D+++Y+ +I  LC  G++ +A+  F++M  K
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK 462



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 191/368 (51%), Gaps = 14/368 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  G  P+V T+N  I+ LC +G  + A  +F +M     E   + +PN +
Sbjct: 144 DAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQID--EVLGLPQPNII 201

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G CKEG +++A+ LF KMK      N  +YN  + G        EA+ +  EM
Sbjct: 202 TYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEM 261

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G++PNV S+N++M+ LCKNG + +A  L+ LM   GV P+   Y TL+ G+C TG+V
Sbjct: 262 VDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKV 321

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M   GC  N ++ +IL+    K   I  A  L  +M  KG   D V  N +
Sbjct: 322 SEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIV 381

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++++A ++ + M  HG AA      ++I      G + ++    + +     
Sbjct: 382 IDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI------GLVDDSDSRKKCMP---- 431

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +Y+ +I GLCK+GR+  A + F  +    L  D   Y++ IH+ C +GK+  A  
Sbjct: 432 --DLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFR 489

Query: 362 LFLDMEAK 369
           +  DME K
Sbjct: 490 VLKDMEKK 497



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 179/373 (47%), Gaps = 29/373 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF K++V     N  +YN  + GL R G  + A  + +EM +   E      PN  
Sbjct: 218 EARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGME------PNVY 271

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++DGLCK G +  A+ L   M    + P+ VTY +L+HG+C+    +EA  +  EM
Sbjct: 272 SYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREM 331

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G  PN  + N+++  L K G++ EA  LL+ M + G   +    N ++DG C  G++
Sbjct: 332 MRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKL 391

Query: 182 NRAEELFVSMESMG-----------------------CKHNVFSYSILINGYCKNKEIEG 218
           ++A E+   M + G                       C  ++ SYS +I+G CK   +  
Sbjct: 392 DKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGE 451

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A   + EM+ K ++PD  IY+       +  ++  AF++  +M++ G       Y + I 
Sbjct: 452 AKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIM 511

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GL     I E   L   +R      D+  YN ++  LC+ GR+K A  +   + +  +  
Sbjct: 512 GLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISP 571

Query: 339 DVVTYNIMIHALC 351
           ++ +++I+I A C
Sbjct: 572 NISSFSILIKAFC 584



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 187/375 (49%), Gaps = 14/375 (3%)

Query: 2   EAAALFMKLRVFGCE--PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKP 58
           +A + F  LR    E  P+++ YN L+    + G       L ++M A+G         P
Sbjct: 2   KAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASG-------VSP 54

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            T T+  +I  LC  G +D A+ELF KM ++   PN  ++  L+ G+C A   ++   L 
Sbjct: 55  ETYTFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELL 114

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM   G  PN V +N +++  CK GK D+A +L++ M + G+ P+   +N  +   C +
Sbjct: 115 GEMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSS 174

Query: 179 GRVNRAEELFVSM---ESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           G+V  A  +F  M   E +G    N+ +Y++++ G+CK   +E A +L+ +M       +
Sbjct: 175 GKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMN 234

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
              YN   +GL  I ++  A  +  EM   G+  + ++Y   +DGLCKNG + +A  L R
Sbjct: 235 RESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMR 294

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       D   Y  L+ G C +G++  A  + R + R     +  T NI++++L  +G
Sbjct: 295 LMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEG 354

Query: 355 KMDKARDLFLDMEAK 369
           ++ +A +L   M  K
Sbjct: 355 RISEAEELLQKMNEK 369



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 176/417 (42%), Gaps = 64/417 (15%)

Query: 4   AALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + M+L    G  P+  TY TL++G C TG    A N+  EM          C PN  T
Sbjct: 289 ARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDG------CSPNNYT 342

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              ++  L KEG + +A+EL  KM ++    + VT N +I G C     ++A  +   M 
Sbjct: 343 CNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMW 402

Query: 123 DQGVQ-----------------------PNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
             G                         P+++S++ I++ LCK G++ EA +    M+  
Sbjct: 403 THGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK 462

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
            ++P++ +Y+  +  FC  G+++ A  +   ME  GC   + +Y+ LI G     +I   
Sbjct: 463 NLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEI 522

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             L  EM  +G+ PDV IYN +   L E  +V+ A  + DEM + G++ +  ++   I  
Sbjct: 523 YGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKA 582

Query: 280 LCK----------------------------------NGYIVEAVELFRTLRILKYELDI 305
            CK                                   G +V+A ELF T     +++  
Sbjct: 583 FCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGN 642

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             Y  LID LCK  +L  A  +   L       D  ++  +I  L   G   +A +L
Sbjct: 643 FLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADEL 699



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 158/344 (45%), Gaps = 20/344 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN---------GNGEF 52
           EA  L  K+   G   +  T N +I+GLC  G    A+ +   M           GN   
Sbjct: 358 EAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYI 417

Query: 53  GVV--------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           G+V        C P+ ++Y+TII GLCK G V +AK+ F++M  +N+ P+   Y+  IH 
Sbjct: 418 GLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHS 477

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           FC     + A  +  +M  +G    + ++N ++  L    ++ E   L++ M + GV P+
Sbjct: 478 FCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPD 537

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +YN ++   C  GRV  A  +   M   G   N+ S+SILI  +CK  +      ++ 
Sbjct: 538 VSIYNNVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFE 597

Query: 225 EMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             L+  G K    +Y+  F  L    +V +A +LF+           + Y+  ID LCK+
Sbjct: 598 IALNVCGHKE--ALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKD 655

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
             + +A  +   L    Y  D  ++  +IDGL K G    A EL
Sbjct: 656 EKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADEL 699



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 40/281 (14%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P++ +Y+T+I+GLC+ G    A   F EM   N       +P++  Y   I   CKEG
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKN------LQPDSAIYDVFIHSFCKEG 482

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +  A  +   M+ +  N  + TYNSLI G    N   E   L  EM ++GV P+V  +N
Sbjct: 483 KISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYN 542

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC------------------ 176
            +++ LC+ G++ +A  +L+ M+Q G+ PN   ++ L+  FC                  
Sbjct: 543 NVLSSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNV 602

Query: 177 ----------------LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                           + G V +A+ELF +          F Y  LI+  CK+++++ A 
Sbjct: 603 CGHKEALYSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDAS 662

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +  +++ KG   D   +  +  GL +      A +L ++M
Sbjct: 663 GILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/221 (25%), Positives = 92/221 (41%), Gaps = 40/221 (18%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC   + TYN+LI GL           L +EM     E GV   P+   Y  ++  LC+ 
Sbjct: 498 GCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMR----ERGV--SPDVSIYNNVLSSLCEG 551

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN--------------------- 112
           G V  A  +  +M  + I+PN+ +++ LI  FC A D++                     
Sbjct: 552 GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYS 611

Query: 113 -------------EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
                        +AK LF   +D+        +  +++ LCK+ K+D+AS +L  +I  
Sbjct: 612 LTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDK 671

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           G   +   +  ++DG    G  + A+EL   M  M  +  V
Sbjct: 672 GYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMASEGKV 712


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/367 (33%), Positives = 187/367 (50%), Gaps = 9/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPNT 60
           EA     K+   G EP+ +TYNTLI G C+ G   +A     E   G+  F G V  P+ 
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA-----ERIVGDAVFNGFV--PDQ 356

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY ++IDGLC EG  ++A  LF +   + I PNV+ YN+LI G        EA  L  E
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G+ P V +FN+++N LCK G + +A  L+++MI  G  P+ F +N L+ G+    +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A E+   M   G   +V++Y+ L+NG CK  + E  +  Y  M+ KG  P++  +N 
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RIL 299
           L   L    +++ A  L +EM+   V  D   + T IDG CKNG +  A  LFR +    
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K       YN +I    +   + +A +LF+ +    L  D  TY +M+   C  G ++  
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656

Query: 360 RDLFLDM 366
               L+M
Sbjct: 657 YKFLLEM 663



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 194/403 (48%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++M++R  G  P+V+++   +   C+T     AL L   M++        C+ N V
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG------CEMNVV 182

Query: 62  TYTTIIDG-----------------------------------LCKEGFVDKAKELFLKM 86
            Y T++ G                                   LCK+G V + ++L  K+
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
               + PN+ TYN  I G C   + + A  +   +++QG +P+V+++N ++  LCKN K 
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA   L  M+  G+ P+++ YNTL+ G+C  G V  AE +       G   + F+Y  L
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C   E   AL+L++E L KGIKP+V++YNTL  GL     +  A +L +EM   G+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +   +   ++GLCK G + +A  L + +    Y  DI  +N LI G     +++ A E
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +   +    +  DV TYN +++ LC   K +   + +  M  K
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/366 (29%), Positives = 179/366 (48%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L  K+   G  PN+FTYN  I GLC+ G    A+ +   +           KP+ +
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP------KPDVI 287

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCK     +A+    KM +E + P+  TYN+LI G+C       A+ +  + 
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+  ++  +++ LC  G+ + A  L    +  G++PN  +YNTL+ G    G +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M   G    V +++IL+NG CK   +  A  L   M+SKG  PD+  +N L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     ++E A ++ D M  +GV  D + Y + ++GLCK     + +E ++T+     
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  +N L++ LC+  +L  A  L   +    +  D VT+  +I   C +G +D A  
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587

Query: 362 LFLDME 367
           LF  ME
Sbjct: 588 LFRKME 593



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 184/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++  + CEP VF+YN +++ L  +G+   A  ++  M +     G+   P+  
Sbjct: 94  EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR----GIT--PDVY 147

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++T  +   CK      A  L   M  +    NVV Y +++ GF   N   E   LF +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV   + +FN ++  LCK G + E  +LL+ +I+ GV PN F YN  + G C  G +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   +   G K +V +Y+ LI G CKN + + A     +M+++G++PD   YNTL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V+ A ++  +   +G   D + YR+ IDGLC  G    A+ LF        
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  YN LI GL   G +  A +L   +    LI +V T+NI+++ LC  G +  A  
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447

Query: 362 LFLDMEAK 369
           L   M +K
Sbjct: 448 LVKVMISK 455



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 157/314 (50%), Gaps = 9/314 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EAA L  ++   G  P V T+N L+NGLC+ G    A  L + M +  G F     P+ 
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS-KGYF-----PDI 461

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  +I G   +  ++ A E+   M D  ++P+V TYNSL++G C  + + +    +  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G  PN+ +FN+++  LC+  K+DEA  LLE M    V P+A  + TL+DGFC  G 
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 181 VNRAEELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ A  LF  ME +     +  +Y+I+I+ + +   +  A  L+ EM+ + + PD   Y 
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  G  +   V   +K   EM  +G           I+ LC    + EA  +    R++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH--RMV 699

Query: 300 KYELDIRAYNCLID 313
           +  L   A N + D
Sbjct: 700 QKGLVPEAVNTICD 713



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 150/334 (44%), Gaps = 37/334 (11%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           ++G V +A  +F +M   +  P V +YN+++     +  +++A  +++ M D+G+ P+V 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF---------------- 175
           SF + M   CK  +   A RLL  M   G   N   Y T++ GF                
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207

Query: 176 -------------------CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
                              C  G V   E+L   +   G   N+F+Y++ I G C+  E+
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +GA+ +   ++ +G KPDV+ YN L  GL +  + + A     +M   G+  D++ Y T 
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGV 335
           I G CK G +  A  +        +  D   Y  LIDGLC  G    A  LF  +L +G+
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +V+ YN +I  L   G + +A  L  +M  K
Sbjct: 388 K-PNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 142/285 (49%), Gaps = 20/285 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V+TYN+L+NGLC+T      +  ++ M          C PN  T+  +++ LC+ 
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRY 544

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVS 132
             +D+A  L  +MK++++NP+ VT+ +LI GFC   D + A  LF +M +   V  +  +
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N+I++   +   +  A +L + M+   + P+ + Y  ++DGFC TG VN   +  + M 
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +   +IN  C    +  A  +   M+ KG+ P+ V  NT    + ++ + E
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NT----ICDVDKKE 718

Query: 253 -RAFKLFDEMQRHGVAADTWAYRTFIDGL------CKNGYIVEAV 290
             A KL  E          +AY    DGL       K G+ V A+
Sbjct: 719 VAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRLRKKKGFTVVAI 763



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 3/237 (1%)

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           G +  + ++  ++ +L   GK +    +L ++   +G      VY   M  +   G+V  
Sbjct: 35  GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  +F  M+   C+  VFSY+ +++    +   + A  +Y  M  +GI PDV  +     
Sbjct: 95  AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
              +  +   A +L + M   G   +  AY T + G  +  +  E  ELF  +      L
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +  +N L+  LCK G +K   +L  + + RGVL  ++ TYN+ I  LC  G++D A
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL-PNLFTYNLFIQGLCQRGELDGA 270



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 14/194 (7%)

Query: 183 RAEELFVSM-ESMGCKHNVFSYSILING---YCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           +A E+F SM + +G KH + +Y  +I     Y K + +E  L    E +   +   V   
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV--- 78

Query: 239 NTLFIGLFEIH----QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
              ++G  + +    +V+ A  +F+ M  +      ++Y   +  L  +GY  +A +++ 
Sbjct: 79  ---YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +R      D+ ++   +   CK+ R   A  L  ++       +VV Y  ++     + 
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195

Query: 355 KMDKARDLFLDMEA 368
              +  +LF  M A
Sbjct: 196 FKAEGYELFGKMLA 209


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/347 (34%), Positives = 179/347 (51%), Gaps = 12/347 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++FTYNTLI GLC+ G+ + A  L  EM          C+PN +TYT +ID  CKE
Sbjct: 9   GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKG------CEPNVITYTILIDRFCKE 62

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A+ +  +M  + +  N V YN LI   C      +A  +F +M  +G +P++ +F
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LCK  K +EA  L + M+  GV  N   YNTL+  F   G +  A +L   M  
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLF 182

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ LI   C+   IE  L+L+ +M+SKG+ P+ +  N L  GL     ++ 
Sbjct: 183 RGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQH 242

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +   +M   G+  D   Y + I+GLCK G   EA+ LF  L++     D   YN LI 
Sbjct: 243 ALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLIS 302

Query: 314 GLCKSGRLKIAWELFRSLPRGV---LIADVVTYNIMIHALCADGKMD 357
             CK G    A  L   L RGV    I + VT+ I++     +G  +
Sbjct: 303 WHCKEGMFDDAHLL---LSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/312 (33%), Positives = 163/312 (52%)

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
             V C P+  TY T+I GLCK+G++  A+EL  +M+ +   PNV+TY  LI  FC     
Sbjct: 6   LSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRL 65

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            EA+ +  EM  +G+  N V +N +++ LCK+ K+ +A  +   M   G +P+ F +N+L
Sbjct: 66  EEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSL 125

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G C   +   A  L+  M   G   N  +Y+ LI+ + +   ++ AL L ++ML +G 
Sbjct: 126 IFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGC 185

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             D + YN L   L     +E+   LF++M   G+  +  +    I+GLC+ G I  A+E
Sbjct: 186 PLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALE 245

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
             R +       DI  YN LI+GLCK+GR + A  LF  L    +  D +TYN +I   C
Sbjct: 246 FLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHC 305

Query: 352 ADGKMDKARDLF 363
            +G  D A  L 
Sbjct: 306 KEGMFDDAHLLL 317



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 151/289 (52%), Gaps = 6/289 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  L  ++++ GCEPNV TY  LI+  C+ G    A N+ +EM+      G     N 
Sbjct: 31  VSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS------GKGLALNA 84

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +I  LCK+  V  A  +F  M  +   P++ T+NSLI G C  N + EA  L+ +
Sbjct: 85  VGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQD 144

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV  N +++N +++   + G M EA +L+  M+  G   +   YN L+   C  G 
Sbjct: 145 MLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGN 204

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +   LF  M S G   N  S +ILING C+   I+ AL    +M+ +G+ PD+V YN+
Sbjct: 205 IEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNS 264

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           L  GL +  + + A  LFD++Q  G+  D   Y T I   CK G   +A
Sbjct: 265 LINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDA 313



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 129/247 (52%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+  G  P++ ++N ++  LCK G +  A  L+  M   G  PN   Y  L+D FC  G
Sbjct: 4   SMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEG 63

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+  A  +   M   G   N   Y+ LI+  CK+++++ AL+++ +M SKG KPD+  +N
Sbjct: 64  RLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFN 123

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  GL ++++ E A  L+ +M   GV A+T  Y T I    + G + EA++L   +   
Sbjct: 124 SLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFR 183

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              LD   YN LI  LC++G ++    LF  +    L  + ++ NI+I+ LC  G +  A
Sbjct: 184 GCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHA 243

Query: 360 RDLFLDM 366
            +   DM
Sbjct: 244 LEFLRDM 250



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%)

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           ++  MLS G  PD+  YNTL +GL +   +  A +L +EMQ  G   +   Y   ID  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K G + EA  +   +      L+   YNCLI  LCK  +++ A  +F  +       D+ 
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
           T+N +I  LC   K ++A  L+ DM
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDM 145



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 43/113 (38%), Positives = 60/113 (53%)

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + + M   G   D + Y T I GLCK GY+V A EL   ++I   E ++  Y  LID  C
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K GRL+ A  +   +    L  + V YN +I ALC D K+  A ++F DM +K
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSK 113


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/353 (33%), Positives = 185/353 (52%), Gaps = 7/353 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V+TYNTL+ GLC  G    A+ + +EM +      +   P+ VTY T+IDG  K     
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMES------LKLIPDVVTYNTLIDGCFKWRGST 189

Query: 78  KAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           +   L  +MK    + PN VT+N ++  F      NEA    ++M++ GV P+  ++N +
Sbjct: 190 EGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTM 249

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  CK GK+ EA R+++ M + G++P+    NT++   C+  +   A EL V     G 
Sbjct: 250 INGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGY 309

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +Y  LI GY K K+ + AL L+ EM  +GI P VV YN L  GL    + ++A  
Sbjct: 310 ILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVD 369

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             +E+   G+  D  +    I G C  G + +A +    +    ++ DI   N L+ GLC
Sbjct: 370 KLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLC 429

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +   L+ A++LF S        DVVTYN MI  LC +G++D+A DL  DME K
Sbjct: 430 RVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVK 482



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 189/400 (47%), Gaps = 52/400 (13%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNTLI+G  +   +     L EEM +  G      +PN VT+  ++    KEG +
Sbjct: 170 PDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGG-----VEPNAVTHNIMVKWFGKEGKI 224

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A +  +KM +  ++P+  TYN++I+GFC A    EA  +  EM  +G++P++ + N +
Sbjct: 225 NEASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTM 284

Query: 137 MNELC-----------------------------------KNGKMDEASRLLELMIQIGV 161
           ++ LC                                   K  + D+A +L E M + G+
Sbjct: 285 LHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGI 344

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   YN L+ G CL+G+ ++A +    +   G   +  S +I+I+GYC    ++ A  
Sbjct: 345 VPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQ 404

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            +++M+    KPD+   N L  GL  +  +E+AFKLF+       + D   Y T I  LC
Sbjct: 405 FHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLC 464

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP---RGVLIA 338
           K G + EA +L   + + K+E D   YN ++  L  +GR + A +    L    + V   
Sbjct: 465 KEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTH 524

Query: 339 DV---------VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D          + Y+  I  LC  GK  +A  LF + E K
Sbjct: 525 DTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQK 564



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 176/347 (50%), Gaps = 19/347 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+   +K+   G  P+ FTYNT+ING C+ G    A  + +EMA          KP+  
Sbjct: 226 EASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKG------LKPDIC 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T  T++  LC E   ++A EL +K +      + VTY +LI G+      ++A  L+ EM
Sbjct: 280 TLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+VVS+N ++  LC +GK D+A   L  +++ G+ P+    N ++ G+C  G V
Sbjct: 340 KKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMV 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A +    M     K ++F+ +IL+ G C+   +E A  L++  +SK    DVV YNT+
Sbjct: 400 DKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTM 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA----VELFRTLR 297
              L +  +++ AF L  +M+      D + Y   +  L   G   EA     +L  T +
Sbjct: 460 ISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQ 519

Query: 298 ILK-----YELDIRA---YNCLIDGLCKSGRLKIAWELFR-SLPRGV 335
            +K      ELD  +   Y+  I  LC  G+ K A +LF+ S  +GV
Sbjct: 520 AVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQKGV 566



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/261 (26%), Positives = 114/261 (43%), Gaps = 53/261 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ +++  G  P+V +YN LI GLC +G T  A++   E+     E G+V  P+ V
Sbjct: 331 KALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL----EKGLV--PDEV 384

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +   II G C EG VDKA +   KM   +  P++ T N L+ G C  +   +A  LF   
Sbjct: 385 SCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSW 444

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +    +VV++N +++ LCK G++DEA  L+  M      P+ + YN ++      GR 
Sbjct: 445 ISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRT 504

Query: 182 NRAEE-----------------------------------------------LFVSMESM 194
             AE+                                               LF   E  
Sbjct: 505 EEAEKFMSKLSETGQAVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLFQESEQK 564

Query: 195 GCKHNVFSYSILINGYCKNKE 215
           G   N ++Y  L++G+ K ++
Sbjct: 565 GVSLNKYTYIKLMDGFLKRRK 585


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 188/362 (51%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   G  PN  TYNT+I+G  + G       L ++M +         KPN V
Sbjct: 212 DALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGP------KPNVV 265

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLC+ G +D+ + L  +M   ++ P+  TY+ L  G     +      LF E 
Sbjct: 266 TYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAES 325

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV     + ++++N LCK+GK+ +A ++ E+++  G+ P   +YNTL++G+C    +
Sbjct: 326 LKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDL 385

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +F  M+S   + +  +Y+ LING CK + +  A  L  EM   G+ P V  +NTL
Sbjct: 386 RGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTL 445

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                   Q+E+ F +  +MQ+ G+ +D  ++ + +   CKNG I EAV +   +     
Sbjct: 446 IDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDV 505

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             + + YN +ID   +SG  + A  L   +    + A +VTYN+++  LC   ++D+A +
Sbjct: 506 APNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEE 565

Query: 362 LF 363
           L 
Sbjct: 566 LI 567



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 191/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E  AL  ++      P+ FTY+ L +GL RTG +   L+LF E        G        
Sbjct: 282 ETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAY------ 335

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +++GLCK+G V KAK++F  +    + P  V YN+LI+G+C   D   A C+F +M
Sbjct: 336 TCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQM 395

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +++N ++N LCK   + +A  L+  M + GV P+   +NTL+D +   G++
Sbjct: 396 KSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQL 455

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +   +   M+  G K +V S+  ++  +CKN +I  A+++  +M+ K + P+  +YN++
Sbjct: 456 EKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSI 515

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E    E+A  L ++M+  GV+A    Y   + GLC++  I EA EL  TLR    
Sbjct: 516 IDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGL 575

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +YN +I   C  G    A EL + + +  +   + T + ++ AL + G++     
Sbjct: 576 RPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMEC 635

Query: 362 LFLDM 366
           L+  M
Sbjct: 636 LYQQM 640



 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 180/362 (49%), Gaps = 4/362 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A F  L   G  P+ F +N ++      G   VAL +   M    G       P+  +Y 
Sbjct: 143 AAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEG----APPPDAFSYN 198

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I GL + G    A ++F +M D  + PN +TYN++I G     D      L  +M+  
Sbjct: 199 VVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHD 258

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +PNVV++NV+++ LC+ G+MDE   L++ M    + P+ F Y+ L DG   TG     
Sbjct: 259 GPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTM 318

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF      G     ++ SIL+NG CK+ ++  A  ++  ++  G+ P  VIYNTL  G
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLING 378

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             ++  +  AF +F++M+   +  D   Y   I+GLCK   + +A +L   +     +  
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  +N LID    +G+L+  + +   + +  + +DV+++  ++ A C +GK+ +A  +  
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILD 498

Query: 365 DM 366
           DM
Sbjct: 499 DM 500



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 166/313 (53%), Gaps = 6/313 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  L   G  P    YNTLING C+      A  +FE+M + +       +P+ +
Sbjct: 352 KAKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH------IRPDHI 405

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLCK   V KA++L ++M+   ++P+V T+N+LI  +  A    +   +  +M
Sbjct: 406 TYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDM 465

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ +V+SF  ++   CKNGK+ EA  +L+ MI   V PNA VYN+++D +  +G  
Sbjct: 466 QQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDT 525

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  L   M++ G   ++ +Y++L+ G C++ +I+ A  L   + ++G++PDVV YNT+
Sbjct: 526 EQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTI 585

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                     ++A +L  EM ++G+        T +  L   G + +   L++ +     
Sbjct: 586 ISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNV 645

Query: 302 ELDIRAYNCLIDG 314
           E     Y  ++D 
Sbjct: 646 EPSSSIYGIMVDA 658



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 163/330 (49%), Gaps = 6/330 (1%)

Query: 46  ANGNGEFGVV----CKPNTVTYTTIIDGLCKEGFVDKAKELFLKM--KDENINPNVVTYN 99
           A+    FG++     +P+T  +  ++      G +D A  +  +M   +    P+  +YN
Sbjct: 139 ADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGRSEGAPPPDAFSYN 198

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            +I G   +   ++A  +F EM+D GV PN +++N +++   K G ++   RL + M+  
Sbjct: 199 VVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHD 258

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G +PN   YN L+ G C TGR++    L   M S     + F+YSIL +G  +  E +  
Sbjct: 259 GPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTM 318

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           LSL++E L KG+       + L  GL +  +V +A ++F+ +   G+   T  Y T I+G
Sbjct: 319 LSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLING 378

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            C+   +  A  +F  ++      D   YN LI+GLCK   +  A +L   + +  +   
Sbjct: 379 YCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPS 438

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           V T+N +I A    G+++K   +  DM+ K
Sbjct: 439 VETFNTLIDAYGTAGQLEKCFTVLSDMQQK 468



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 6/268 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L M++   G +P+V T+NTLI+     G       +  +M     + G+  K + +
Sbjct: 422 KAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQ----QKGI--KSDVI 475

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +++   CK G + +A  +   M  +++ PN   YNS+I  +  + D  +A  L  +M
Sbjct: 476 SFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV  ++V++N+++  LC++ ++DEA  L+  +   G+RP+   YNT++   C  G  
Sbjct: 536 KNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDT 595

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A EL   M   G +  + +   L++       +     LY +ML K ++P   IY  +
Sbjct: 596 DKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIM 655

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
                      +   L  EM   G+A D
Sbjct: 656 VDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 102/314 (32%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A+F  ++ FG  P+V +Y+ LI+GL + G      N+F+ M+     F +  +     Y 
Sbjct: 546 AIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQG--FALDAR----AYN 599

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            ++DGLCK G VDKA E+  +MK ++++P V TY S++ G    +  +EA  LF E   +
Sbjct: 600 AVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSK 659

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NV+ ++ +++   K G++DEA  +LE M++ G+ PN + +N+LMD    T  ++ A
Sbjct: 660 GIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEA 719

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F SM+ M C  N ++YSILING C+ ++   A   + EM  +G+ P+VV Y T+  G
Sbjct: 720 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISG 779

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++  +  A+ LF+  + +G   D+ ++   I+G+      +EA ++F   R+    L+
Sbjct: 780 LAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLN 839

Query: 305 IRAYNCLIDGLCKS 318
           ++    L+D L K+
Sbjct: 840 VKTCISLLDALNKT 853



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 191/368 (51%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++      P  + YNT+I G         A  L E +     E G  C P+ V
Sbjct: 299 EAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLR----ERG--CIPSVV 352

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +I+  L K+  VD+A  LF  MK ++  PN+ TYN +I   C A   NEA  +  EM
Sbjct: 353 SFNSILTCLGKKRKVDEALTLFDVMK-KDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEM 411

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN++S N++++ LCK  +++EA R+ E   + G  PN+  Y +L+DG    G++
Sbjct: 412 ELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKI 471

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M   G   N   Y+ LI  +  +   E    +Y EM+ +G +PD+ + NT 
Sbjct: 472 DDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTY 531

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              +F+  +VE+   +F++M+  G   D  +Y   I GL K G   E   +F+ +    +
Sbjct: 532 MDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGF 591

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD RAYN ++DGLCKSG++  A+E+   +    +   V TY  ++  L    ++D+A  
Sbjct: 592 ALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYM 651

Query: 362 LFLDMEAK 369
           LF + ++K
Sbjct: 652 LFEEAKSK 659



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/397 (28%), Positives = 201/397 (50%), Gaps = 41/397 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++ + G  PN+ + N +++ LC+      A  +FE  A+  G     C PN+V
Sbjct: 403 EAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFES-ASERG-----CNPNSV 456

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF---------------- 105
           TY ++IDGL K+G +D A  LF KM D   + N + Y SLI  F                
Sbjct: 457 TYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEM 516

Query: 106 -----------------CY--ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                            C   A +  + + +F +M   G  P+V S++++++ L K G+ 
Sbjct: 517 IRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQA 576

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            E S + + M Q G   +A  YN ++DG C +G+V++A E+   M+       V +Y  +
Sbjct: 577 RETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSI 636

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G  K   ++ A  L+ E  SKGI+ +V++Y++L  G  ++ +++ A+ + +EM + G+
Sbjct: 637 VDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGL 696

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             + + + + +D L K   I EA+  F++++ +K   +   Y+ LI+GLC+  +   A+ 
Sbjct: 697 TPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFV 756

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ++ + +  LI +VVTY  MI  L   G +  A  LF
Sbjct: 757 FWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLF 793



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 199/406 (49%), Gaps = 45/406 (11%)

Query: 1   MEAA-ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKP 58
           ME A AL  +++    EP++  YN  I+   + G   +A   F E+ A+G        +P
Sbjct: 227 MEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHG-------LRP 279

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           + V+YT+++  LCK G + +A+ELF +M+ E   P    YN++I G+  A  +++A  L 
Sbjct: 280 DDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLL 339

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             + ++G  P+VVSFN I+  L K  K+DEA  L ++M +   +PN   YN ++D  C+ 
Sbjct: 340 ERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMA 398

Query: 179 GRVN-----------------------------------RAEELFVSMESMGCKHNVFSY 203
           GRVN                                    A  +F S    GC  N  +Y
Sbjct: 399 GRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTY 458

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
             LI+G  K  +I+ A  L+ +ML  G   + +IY +L    F   + E   K++ EM R
Sbjct: 459 CSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIR 518

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G   D     T++D + K G + +   +F  ++   +  D+R+Y+ LI GL K+G+ + 
Sbjct: 519 RGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARE 578

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +F+++ +     D   YN ++  LC  GK+DKA ++  +M+ K
Sbjct: 579 TSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK 624



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 185/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +LR  GC P+V ++N+++  L +      AL LF+ M           KPN  
Sbjct: 334 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKD-------AKPNIS 386

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  IID LC  G V++A ++  +M+   + PN+++ N ++   C AN   EA  +F   
Sbjct: 387 TYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESA 446

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G  PN V++  +++ L K GK+D+A RL E M+  G   N  +Y +L+  F + GR 
Sbjct: 447 SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRK 506

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +++  M   G + ++   +  ++   K  E+E   +++ +M S G  PDV  Y+ L
Sbjct: 507 EDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSIL 566

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  Q      +F  M + G A D  AY   +DGLCK+G + +A E+   +++   
Sbjct: 567 IHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHV 626

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  Y  ++DGL K  RL  A+ LF       +  +V+ Y+ +I      G++D+A  
Sbjct: 627 HPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYL 686

Query: 362 LFLDMEAK 369
           +  +M  K
Sbjct: 687 ILEEMMKK 694



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 147/310 (47%), Gaps = 1/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P    YT +I  L +    ++A EL  +M+D     +V  + +L+           A  
Sbjct: 173 RPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALA 232

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  E+    ++P++V +NV ++   K G +D A +    +   G+RP+   Y +++   C
Sbjct: 233 LVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLC 292

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  AEELF  ME+       ++Y+ +I GY   +  + A  L   +  +G  P VV
Sbjct: 293 KAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVV 352

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N++   L +  +V+ A  LFD M++     +   Y   ID LC  G + EA ++   +
Sbjct: 353 SFNSILTCLGKKRKVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEM 411

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +     ++ + N ++D LCK+ +L+ A  +F S        + VTY  +I  L   GK+
Sbjct: 412 ELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKI 471

Query: 357 DKARDLFLDM 366
           D A  LF  M
Sbjct: 472 DDAYRLFEKM 481



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/364 (23%), Positives = 166/364 (45%), Gaps = 14/364 (3%)

Query: 3   AAALFMKLRVFGCEP-NVFTYNTLINGLCRTGHTIVAL-NLFEEMAN-GNGEFGVVCKPN 59
           AA  F+       +P     YN ++  L    H + AL  + EEM++ G G     C   
Sbjct: 91  AAPFFLLASASSSQPLPPDAYNAVLPFL---SHDLAALEKVLEEMSHLGYGLPNPAC--- 144

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
                 ++  L +   ++ A  +   M+     P    Y  LI     A     A  L  
Sbjct: 145 ----AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLR 200

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M D G + +V  F  ++  L + G+M+ A  L++ +    + P+  +YN  +D F   G
Sbjct: 201 QMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAG 260

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V+ A + F  +++ G + +  SY+ ++   CK   +  A  L+ +M ++   P    YN
Sbjct: 261 SVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYN 320

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           T+ +G     + + A+KL + ++  G      ++ + +  L K   + EA+ LF  ++  
Sbjct: 321 TMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMK-K 379

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + +I  YN +ID LC +GR+  A+++   +    L  ++++ NIM+  LC   ++++A
Sbjct: 380 DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA 439

Query: 360 RDLF 363
             +F
Sbjct: 440 HRIF 443



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 6/165 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++   C PN +TY+ LINGLCR      A   ++EM       G++  PN V
Sbjct: 718 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ----GLI--PNVV 771

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I GL K G +  A  LF + K     P+  ++N+LI G   AN   EA  +F E 
Sbjct: 772 TYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEET 831

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
             +G + NV +   +++ L K   +++A+ +  ++ +I    +A+
Sbjct: 832 RLRGCRLNVKTCISLLDALNKTECLEQAAIVGAVLSEIAKSQHAY 876



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 84/185 (45%)

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           E++   M  +G      + + L+    +++ +E A  +   M     +P    Y  L   
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L E  Q ERA +L  +MQ  G       + T +  L + G +  A+ L   ++    E D
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           I  YN  ID   K+G + +AW+ F  L    L  D V+Y  M+  LC  G++ +A +LF 
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFG 305

Query: 365 DMEAK 369
            MEA+
Sbjct: 306 QMEAE 310


>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 775

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/368 (33%), Positives = 203/368 (55%), Gaps = 7/368 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF +++  G  P++ TYN+LI+G  + G    +  LFEEM +      V C+P+ +T
Sbjct: 271 AKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKD------VGCEPDVIT 324

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+  CK   + KA     +MK+  + PNVVTY++LI   C  +   +A    ++M 
Sbjct: 325 YNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMR 384

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  ++  +++  CK G + +A +L + M+Q+ V  N   Y TL+DG C  GR+ 
Sbjct: 385 RVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMM 444

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AE+LF +M   G   N+ +Y+ L++G+ KNK +E AL L  E+  K IKPD+++Y T+ 
Sbjct: 445 EAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTII 504

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL   +++E    +  EM+  G+ A++  Y   +D   K G  VEA+ L + +  L  E
Sbjct: 505 WGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVE 564

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + I  +  LIDGLCK G ++ A + F R     +   +V     +I  LC +  ++ A+ 
Sbjct: 565 VTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKK 624

Query: 362 LFLDMEAK 369
           LF +M+ K
Sbjct: 625 LFDEMQDK 632



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 181/340 (53%), Gaps = 4/340 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           F  N  +  L  +   +   ++FE + +       VC P    +  +     + G +++A
Sbjct: 146 FDANFFLKELISSRRILPGFDVFEVLWSTRN----VCVPGFGVFDALFSVFIELGMLEEA 201

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            + F +M    + P   + N+ ++        + +   F +M+  G+  +V ++N+++  
Sbjct: 202 GQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGY 261

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           +CK G M  A  L   M Q+G+ P+   YN+L+DG+   G ++ +  LF  M+ +GC+ +
Sbjct: 262 MCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPD 321

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V +Y+ LIN +CK +++  A     EM + G+KP+VV Y+TL   L + H +++A K   
Sbjct: 322 VITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLL 381

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M+R G++ + + Y + ID  CK GY+ +A++L   +  ++   ++  Y  L+DGLCK G
Sbjct: 382 DMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEG 441

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           R+  A +LFR++ +  +  ++ TY  ++H    + +++ A
Sbjct: 442 RMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENA 481



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/362 (30%), Positives = 184/362 (50%), Gaps = 7/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A    + +R  G  PN FTY +LI+  C+ G+   AL L +EM      F      N V
Sbjct: 375 QAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGF------NVV 428

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++DGLCKEG + +A++LF  M    + PN+ TY +L+HG         A  L  E+
Sbjct: 429 TYTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEI 488

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ ++P+++ +  I+  LC   K++E   ++  M   G+R N+ +Y   MD +  TG+ 
Sbjct: 489 KEKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKT 548

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD-VVIYNT 240
             A  L   M  +G +  + ++ +LI+G CK   +E A+  ++ M    ++P+ V +   
Sbjct: 549 VEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTA 608

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL + + +E A KLFDEMQ   +  D  AY   IDG  K+    EA+ +   +  L 
Sbjct: 609 LIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRSRMSELG 668

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            ELD+ AY  L+ GL +   ++ A      +    ++ D +    ++      G +D+A 
Sbjct: 669 MELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELGSIDEAI 728

Query: 361 DL 362
           +L
Sbjct: 729 EL 730



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F ++  F   P   + N  +  L +TG   ++   F +M       G     +  
Sbjct: 200 EAGQCFSRMTRFRVFPKARSCNAFLYRLAKTGKGDLSNKFFRDMV------GAGIAQSVF 253

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  +CKEG +  AK LF +MK   + P++VTYNSLI G+      +E+ CLF EM
Sbjct: 254 TYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEM 313

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G +P+V+++N ++N  CK  +M +A   L  M   G++PN   Y+TL+D  C    +
Sbjct: 314 KDVGCEPDVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHML 373

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +  + M  +G   N F+Y+ LI+  CK   +  AL L  EML   +  +VV Y TL
Sbjct: 374 QQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTL 433

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++  A  LF  M + GV  +   Y   + G  KN  +  A+EL + ++  K 
Sbjct: 434 LDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKI 493

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y  +I GLC   +L+    +   +    + A+ V Y I + A    GK  +A +
Sbjct: 494 KPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALN 553

Query: 362 LFLDM 366
           L  +M
Sbjct: 554 LLQEM 558



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 100/188 (53%), Gaps = 7/188 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  ++   G E  + T+  LI+GLC+ G    A++ F  MA+ N       +PN 
Sbjct: 549 VEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFN------LQPNN 602

Query: 61  VTY-TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           V   T +IDGLCK  +++ AK+LF +M+D+N+ P+ + Y +LI G     D+ EA  +  
Sbjct: 603 VAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEALNIRS 662

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M + G++ ++ ++  ++  L +   + +A   L  MI  G+ P+  +   L+  +   G
Sbjct: 663 RMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKYYELG 722

Query: 180 RVNRAEEL 187
            ++ A EL
Sbjct: 723 SIDEAIEL 730


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 170/306 (55%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ +  T++I G CK G   KA  +   ++D    P+V+TYN LI G C    W +A+ L
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKL 176

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M+ +G  P+VV+FN+++N LC+ G +  A  +LE M + G  PN+  YN L+ GFC 
Sbjct: 177 LADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCK 236

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             ++ RA E    M S GC  ++ +Y+ L+   CK+ +++ A+ L +++ SKG  P ++ 
Sbjct: 237 EKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLIT 296

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNT+  GL ++ + ++A KL DEM+  G+  D   Y + + GL + G + EA++ F  L 
Sbjct: 297 YNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLE 356

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +L  + +   YN ++ GLCK+ +   A +    + +        +Y I+I  L  +G   
Sbjct: 357 VLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAK 416

Query: 358 KARDLF 363
           +A +L 
Sbjct: 417 EALELL 422



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 149/283 (52%), Gaps = 6/283 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYN LI+G+C TG  + A  L  +M          C P+ VT+  +I+ LC++
Sbjct: 149 GAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG------CSPSVVTFNILINFLCRK 202

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A ++  KM      PN ++YN L+HGFC       A     +M  +G  P++V++
Sbjct: 203 GLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTY 262

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LCK+GK+D A  LL  +   G  P    YNT++DG    G+ ++A +L   M +
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRA 322

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K ++ +YS L+ G  +  +++ A+  + ++   G+KP+ + YN + +GL +  + +R
Sbjct: 323 KGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDR 382

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           A      M + G      +Y   I+GL   G   EA+EL   L
Sbjct: 383 AIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNEL 425



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 158/321 (49%), Gaps = 7/321 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++    +LI G C+ G T  A  + E + +     G V  P+ +TY  +I G+C  G  
Sbjct: 117 PDIIPCTSLIRGFCKIGKTRKATRIMEIIEDS----GAV--PDVITYNVLISGMCSTGRW 170

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A++L   M     +P+VVT+N LI+  C       A  +  +M   G  PN +S+N +
Sbjct: 171 MDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPL 230

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK  KM+ A   L  M   G  P+   YNTL+   C  G+V+ A EL   + S GC
Sbjct: 231 LHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGC 290

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              + +Y+ +I+G  K  + + A  L  EM +KG+KPD++ Y++L  GL    +V+ A K
Sbjct: 291 SPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIK 350

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
            F +++  GV  +   Y   + GLCK      A++    +     +    +Y  LI+GL 
Sbjct: 351 FFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLA 410

Query: 317 KSGRLKIAWELFRSL-PRGVL 336
             G  K A EL   L  RGV+
Sbjct: 411 YEGLAKEALELLNELCLRGVV 431



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 148/277 (53%), Gaps = 6/277 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   GC P+V T+N LIN LCR G    A+++ E+M          C PN+
Sbjct: 171 MDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHG------CTPNS 224

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           ++Y  ++ G CKE  +++A E   KM      P++VTYN+L+   C     + A  L  +
Sbjct: 225 LSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQ 284

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P ++++N +++ L K GK D+A++LL+ M   G++P+   Y++L+ G    G+
Sbjct: 285 LSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGK 344

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A + F  +E +G K N  +Y+ ++ G CK ++ + A+   + M+ +G KP    Y  
Sbjct: 345 VDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTI 404

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           L  GL      + A +L +E+   GV   + A +  +
Sbjct: 405 LIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKVAV 441



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 131/251 (52%), Gaps = 1/251 (0%)

Query: 118 FIE-MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           F+E M+ +G  P+++    ++   CK GK  +A+R++E++   G  P+   YN L+ G C
Sbjct: 106 FLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMC 165

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            TGR   AE+L   M   GC  +V +++ILIN  C+   +  A+ +  +M   G  P+ +
Sbjct: 166 STGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSL 225

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN L  G  +  ++ERA +   +M   G   D   Y T +  LCK+G +  AVEL   L
Sbjct: 226 SYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQL 285

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                   +  YN +IDGL K G+   A +L   +    L  D++TY+ ++  L  +GK+
Sbjct: 286 SSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKV 345

Query: 357 DKARDLFLDME 367
           D+A   F D+E
Sbjct: 346 DEAIKFFHDLE 356



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 116/233 (49%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +++L +NG+++E  R LE M+  G  P+     +L+ GFC  G+  +A  +   +E  G 
Sbjct: 91  LSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGA 150

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V +Y++LI+G C       A  L ++M+ +G  P VV +N L   L     + RA  
Sbjct: 151 VPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAID 210

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + ++M +HG   ++ +Y   + G CK   +  A+E    +       DI  YN L+  LC
Sbjct: 211 VLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALC 270

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G++  A EL   L        ++TYN +I  L   GK D+A  L  +M AK
Sbjct: 271 KDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAK 323


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/399 (30%), Positives = 192/399 (48%), Gaps = 41/399 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           ++ +++  G   N +T   LI+GLCR      A+    E   G  EFG    P+ V++  
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRE--TGGEEFG----PSVVSFNA 275

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ G CK G VD AK  F  M    + P+V +YN L+HG C A    EA     +M + G
Sbjct: 276 LMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG 335

Query: 126 VQPNVVSFNVIMNEL-----------------------------------CKNGKMDEAS 150
           V+P++V++N++ N                                     C+ G ++E+ 
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +L E M+  G++ +   Y  L+   C +GR++ A  L   ME +G K ++ +YS+LI+G 
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGL 455

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +E A+ LY EM SK I P+  + + +  GLFE   +  A   FD + +  VA + 
Sbjct: 456 CKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 515

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   IDG  K G I EAV  ++ +        I  +N LI G CK G+L  A +L  +
Sbjct: 516 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 575

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    L+   VTY  +++  C +G M    D+  +MEAK
Sbjct: 576 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAK 614



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 187/362 (51%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ V G +P++ TY+ LI+GLC+ G    A+ L+EEM +          PN+ 
Sbjct: 428 EAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKR------IYPNSF 481

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             + II GL ++G + +A+  F  +   ++   ++ YN +I G+    +  EA   + ++
Sbjct: 482 VCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQI 541

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P +V+FN ++   CK GK+ EA +LL+ +   G+ P +  Y TLM+G+C  G +
Sbjct: 542 IEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDM 601

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +   ++   ME+   K    +Y++++ G CK   +  ++ L   M ++G+ PD + YNT+
Sbjct: 602 HSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTV 661

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                + H +++AF+L ++M +H +      Y   I+GLC  G + +A  L  TL+    
Sbjct: 662 IQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSI 721

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            L   AY  +I   C  G ++ A   F  +        +  Y+ +I+ LC    +  A+ 
Sbjct: 722 RLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKF 781

Query: 362 LF 363
            F
Sbjct: 782 FF 783



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 191/399 (47%), Gaps = 41/399 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F  +  +G  P+V++YN L++GLC  G    AL    +M N   E      P+ VT
Sbjct: 289 AKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVE------PDIVT 342

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  + +G    G +  A ++  +M    +NP++VTY  LI G C   +  E+  L  +M+
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML 402

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG++ ++V++ V+++ LCK+G++DEA  LL  M  IG++P+   Y+ L+ G C  G V 
Sbjct: 403 SQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVE 462

Query: 183 RAEELFVSMESMGCKHNVFS-----------------------------------YSILI 207
            A EL+  M S     N F                                    Y+I+I
Sbjct: 463 EAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMI 522

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +GY K   I  A+  Y +++ KGI P +V +N+L  G  +  ++  A KL D ++ HG+ 
Sbjct: 523 DGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLV 582

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
             +  Y T ++G C+ G +    ++   +     +     Y  ++ GLCK GRL  + +L
Sbjct: 583 PTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQL 642

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +    L  D +TYN +I + C    + KA  L   M
Sbjct: 643 LKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 143/283 (50%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +++ ++K   +  N  T   LI G C  +   +A     E   +   P+VVSFN +M+  
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G +D A     +MI+ G+ P+ + YN L+ G C+ G +  A E    ME+ G + ++
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+IL NG+     I GA  +   ML  G+ PD+V Y  L  G  ++  +E +FKL ++
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M   G+      Y   +  LCK+G I EAV L   + ++  + D+  Y+ LI GLCK G 
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGA 460

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++ A EL+  +    +  +    + +I  L   G + +A+  F
Sbjct: 461 VEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYF 503



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 158/312 (50%), Gaps = 5/312 (1%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND-WNEAKCL 117
           N V +  +     +   V  A  +  KMK  N+  ++ TYNSL++   + +  W+    +
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD----V 222

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + E+   GV  N  +  ++++ LC+  ++ +A   L         P+   +N LM GFC 
Sbjct: 223 YNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCK 282

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G V+ A+  F  M   G   +V+SY+IL++G C    +E AL   ++M + G++PD+V 
Sbjct: 283 MGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVT 342

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G   +  +  A+K+   M  +G+  D   Y   I G C+ G I E+ +L   + 
Sbjct: 343 YNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKML 402

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +L I  Y  L+  LCKSGR+  A  L   +    L  D++TY+++IH LC  G ++
Sbjct: 403 SQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVE 462

Query: 358 KARDLFLDMEAK 369
           +A +L+ +M +K
Sbjct: 463 EAIELYEEMCSK 474



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 117/233 (50%), Gaps = 6/233 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   ++V G  P   TY TL+NG C  G      ++  EM           KP  +
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEME------AKAIKPTQI 621

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++ GLCKEG + ++ +L   M    + P+ +TYN++I  FC A+D  +A  L  +M
Sbjct: 622 TYTVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQM 681

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   +QP+ V++NV++N LC  G + +A RLL  +    +R     Y T++   C  G V
Sbjct: 682 LQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDV 741

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
             A   F  M   G + ++  YS +IN  CK   I  A   +  ML+ GI PD
Sbjct: 742 QNALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPD 794



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 147/292 (50%), Gaps = 6/292 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   + ++   G  P + T+N+LI G C+ G    A+ L + +       G+V  P +V
Sbjct: 533 EAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK----VHGLV--PTSV 586

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+++G C+EG +    ++  +M+ + I P  +TY  ++ G C     +E+  L   M
Sbjct: 587 TYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYM 646

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+ +++N ++   CK   + +A +L   M+Q  ++P+   YN L++G C+ G +
Sbjct: 647 YARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNL 706

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ L V+++    +    +Y+ +I  +C   +++ AL  + +M+ +G +  +  Y+ +
Sbjct: 707 KDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAV 766

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
              L + + +  A   F  M  HG+  D       ++   ++G      E+F
Sbjct: 767 INRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIF 818


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 199/394 (50%), Gaps = 29/394 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-----ANGNGEFGVV- 55
           EA  L   +   G +P VFTYN +INGLC+TG  + A  + +EM     +     + ++ 
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              C+                    P+ V+++ +I  L K G +D+A + F  MK+  + 
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 269

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ V Y  LI GFC     +EA  +  EM++QG   +VV++N I+N LCK   + EA  L
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 329

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M + GV P+ + + TL++G+   G +N+A  LF  M     K +V +Y+ LI+G+CK
Sbjct: 330 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 389

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E+E    L+++M+S+ I P+ + Y  L  G   +  V  AF+L+DEM   G  A    
Sbjct: 390 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 449

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
             T + G C+ G  V+A E    + +     D   YN LI+G  K   +  A+ L   + 
Sbjct: 450 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 509

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L+ DV+TYN++++     G+M +A  + L M
Sbjct: 510 NSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 543



 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 196/367 (53%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ ++   G + NV+T N +IN LC+        +   +M     E GV   P+ VT
Sbjct: 81  AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME----EKGVF--PDVVT 134

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+  C++G +++A EL   M  + + P V TYN++I+G C    +  AK +  EM+
Sbjct: 135 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 194

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  ++N+++ E C+N  M +A R+ + M   GV P+   ++ L+      G ++
Sbjct: 195 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 254

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A + F  M++ G   +   Y+ILI G+C+N  +  AL +  EML +G   DVV YNT+ 
Sbjct: 255 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 314

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   +  A +LF EM   GV  D + + T I+G  K+G + +AV LF  +     +
Sbjct: 315 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 374

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  YN LIDG CK   ++   EL+  +    +  + ++Y I+I+  C  G + +A  L
Sbjct: 375 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 434

Query: 363 FLDMEAK 369
           + +M  K
Sbjct: 435 WDEMVEK 441



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/356 (32%), Positives = 182/356 (51%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYNTLIN  CR G    A  L + M+      G   KP   TY  II+GLCK 
Sbjct: 127 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS------GKGLKPCVFTYNAIINGLCKT 180

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +AK +  +M    ++P+  TYN L+   C  ++  +A+ +F EM  QGV P++VSF
Sbjct: 181 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 240

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++  L KNG +D+A +    M   G+ P+  +Y  L+ GFC  G ++ A ++   M  
Sbjct: 241 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 300

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V +Y+ ++NG CK K +  A  L++EM  +G+ PD   + TL  G  +   + +
Sbjct: 301 QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNK 360

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF+ M +  +  D   Y T IDG CK   + +  EL+  +   +   +  +Y  LI+
Sbjct: 361 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 420

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G C  G +  A+ L+  +      A ++T N ++   C  G   KA +   +M  K
Sbjct: 421 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 476



 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 152/276 (55%), Gaps = 6/276 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  +V TYNT++NGLC+      A  LF EM     E GV   P+  T+TT+I+G  K+
Sbjct: 302 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYSKD 355

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++KA  LF  M   N+ P+VVTYN+LI GFC  ++  +   L+ +M+ + + PN +S+
Sbjct: 356 GNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY 415

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            +++N  C  G + EA RL + M++ G        NT++ G+C  G   +A+E   +M  
Sbjct: 416 GILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 475

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ LING+ K + ++ A +L ++M + G+ PDV+ YN +  G     +++ 
Sbjct: 476 KGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 535

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           A  +  +M   GV  D   Y + I+G      + EA
Sbjct: 536 AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 571



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 159/314 (50%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C  N + +  ++    +   + +  E F  +K + +  ++   NSL+ G       + A 
Sbjct: 23  CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            ++ E++  GVQ NV + N+++N LCKN K++     L  M + GV P+   YNTL++ +
Sbjct: 83  EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ PD 
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             YN L +       +  A ++FDEM   GV  D  ++   I  L KNG + +A++ FR 
Sbjct: 203 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 262

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      D   Y  LI G C++G +  A ++   +     + DVVTYN +++ LC +  
Sbjct: 263 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 322

Query: 356 MDKARDLFLDMEAK 369
           + +A +LF +M  +
Sbjct: 323 LSEADELFTEMTER 336



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 147/268 (54%), Gaps = 6/268 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P+ +T+ TLING  + G+   A+ LFE M   N       KP+ V
Sbjct: 325 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN------LKPDVV 378

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG CK   ++K  EL+  M    I PN ++Y  LI+G+C     +EA  L+ EM
Sbjct: 379 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 438

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +  +++ N I+   C+ G   +A   L  M+  G+ P+   YNTL++GF     +
Sbjct: 439 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 498

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  L   ME+ G   +V +Y++++NG+ +   ++ A  +  +M+ +G+ PD   Y +L
Sbjct: 499 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 558

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             G    + ++ AF++ DEM + G   D
Sbjct: 559 INGHVTQNNLKEAFRVHDEMLQRGFVPD 586



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 3/279 (1%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N   N + ++ L+  +  A    E    F  +  +G+  ++ + N ++  L K G +D A
Sbjct: 22  NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             + + +++ GV+ N +  N +++  C   ++   +     ME  G   +V +Y+ LIN 
Sbjct: 82  WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YC+   +E A  L   M  KG+KP V  YN +  GL +  +  RA  + DEM + G++ D
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
           T  Y   +   C+N  +++A  +F  +       D+ +++ LI  L K+G L  A + FR
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 261

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKA---RDLFLD 365
            +    L  D V Y I+I   C +G M +A   RD  L+
Sbjct: 262 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 300


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 199/394 (50%), Gaps = 29/394 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-----ANGNGEFGVV- 55
           EA  L   +   G +P VFTYN +INGLC+TG  + A  + +EM     +     + ++ 
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              C+                    P+ V+++ +I  L K G +D+A + F  MK+  + 
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 426

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ V Y  LI GFC     +EA  +  EM++QG   +VV++N I+N LCK   + EA  L
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 486

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M + GV P+ + + TL++G+   G +N+A  LF  M     K +V +Y+ LI+G+CK
Sbjct: 487 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 546

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E+E    L+++M+S+ I P+ + Y  L  G   +  V  AF+L+DEM   G  A    
Sbjct: 547 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 606

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
             T + G C+ G  V+A E    + +     D   YN LI+G  K   +  A+ L   + 
Sbjct: 607 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 666

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L+ DV+TYN++++     G+M +A  + L M
Sbjct: 667 NSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 700



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 196/367 (53%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ ++   G + NV+T N +IN LC+        +   +M     E GV   P+ VT
Sbjct: 238 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME----EKGVF--PDVVT 291

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+  C++G +++A EL   M  + + P V TYN++I+G C    +  AK +  EM+
Sbjct: 292 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 351

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  ++N+++ E C+N  M +A R+ + M   GV P+   ++ L+      G ++
Sbjct: 352 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 411

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A + F  M++ G   +   Y+ILI G+C+N  +  AL +  EML +G   DVV YNT+ 
Sbjct: 412 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTIL 471

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   +  A +LF EM   GV  D + + T I+G  K+G + +AV LF  +     +
Sbjct: 472 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLK 531

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  YN LIDG CK   ++   EL+  +    +  + ++Y I+I+  C  G + +A  L
Sbjct: 532 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 591

Query: 363 FLDMEAK 369
           + +M  K
Sbjct: 592 WDEMVEK 598



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 181/353 (51%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYNTLIN  CR G    A  L + M+      G   KP   TY  II+GLCK 
Sbjct: 284 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS------GKGLKPCVFTYNAIINGLCKT 337

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +AK +  +M    ++P+  TYN L+   C  ++  +A+ +F EM  QGV P++VSF
Sbjct: 338 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 397

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++  L KNG +D+A +    M   G+ P+  +Y  L+ GFC  G ++ A ++   M  
Sbjct: 398 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 457

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V +Y+ ++NG CK K +  A  L++EM  +G+ PD   + TL  G  +   + +
Sbjct: 458 QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNK 517

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF+ M +  +  D   Y T IDG CK   + +  EL+  +   +   +  +Y  LI+
Sbjct: 518 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 577

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C  G +  A+ L+  +      A ++T N ++   C  G   KA +   +M
Sbjct: 578 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 630



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 152/276 (55%), Gaps = 6/276 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  +V TYNT++NGLC+      A  LF EM     E GV   P+  T+TT+I+G  K+
Sbjct: 459 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYSKD 512

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++KA  LF  M   N+ P+VVTYN+LI GFC  ++  +   L+ +M+ + + PN +S+
Sbjct: 513 GNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY 572

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            +++N  C  G + EA RL + M++ G        NT++ G+C  G   +A+E   +M  
Sbjct: 573 GILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 632

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ LING+ K + ++ A +L ++M + G+ PDV+ YN +  G     +++ 
Sbjct: 633 KGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 692

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           A  +  +M   GV  D   Y + I+G      + EA
Sbjct: 693 AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 728



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 147/268 (54%), Gaps = 6/268 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P+ +T+ TLING  + G+   A+ LFE M   N       KP+ V
Sbjct: 482 EADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRN------LKPDVV 535

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG CK   ++K  EL+  M    I PN ++Y  LI+G+C     +EA  L+ EM
Sbjct: 536 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 595

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +  +++ N I+   C+ G   +A   L  M+  G+ P+   YNTL++GF     +
Sbjct: 596 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 655

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  L   ME+ G   +V +Y++++NG+ +   ++ A  +  +M+ +G+ PD   Y +L
Sbjct: 656 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 715

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             G    + ++ AF++ DEM + G   D
Sbjct: 716 INGHVTQNNLKEAFRVHDEMLQRGFVPD 743



 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 159/314 (50%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C  N + +  ++    +   + +  E F  +K + +  ++   NSL+ G       + A 
Sbjct: 180 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 239

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            ++ E++  GVQ NV + N+++N LCKN K++     L  M + GV P+   YNTL++ +
Sbjct: 240 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 299

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ PD 
Sbjct: 300 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 359

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             YN L +       +  A ++FDEM   GV  D  ++   I  L KNG + +A++ FR 
Sbjct: 360 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 419

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      D   Y  LI G C++G +  A ++   +     + DVVTYN +++ LC +  
Sbjct: 420 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKM 479

Query: 356 MDKARDLFLDMEAK 369
           + +A +LF +M  +
Sbjct: 480 LSEADELFTEMTER 493



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 3/279 (1%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N   N + ++ L+  +  A    E    F  +  +G+  ++ + N ++  L K G +D A
Sbjct: 179 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 238

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             + + +++ GV+ N +  N +++  C   ++   +     ME  G   +V +Y+ LIN 
Sbjct: 239 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 298

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YC+   +E A  L   M  KG+KP V  YN +  GL +  +  RA  + DEM + G++ D
Sbjct: 299 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 358

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
           T  Y   +   C+N  +++A  +F  +       D+ +++ LI  L K+G L  A + FR
Sbjct: 359 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 418

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKA---RDLFLD 365
            +    L  D V Y I+I   C +G M +A   RD  L+
Sbjct: 419 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 457



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 18/173 (10%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           KH++ S+S +I+   +++ +  A ++   M+ K     V I  +L +           F 
Sbjct: 129 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 188

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L                RT++        + E  E FR L+     + I A N L+ GL 
Sbjct: 189 LL--------------VRTYVQA----RKLREGCEAFRVLKSKGLCVSINACNSLLGGLV 230

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G + +AWE+++ + R  +  +V T NIMI+ALC + K++  +    DME K
Sbjct: 231 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 283


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  198 bits (504), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 189/372 (50%), Gaps = 34/372 (9%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-------FGVVC------------- 56
           P+VF+YN L+NGLC    +  AL L   MA+  G+       +  V              
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKML 108

Query: 57  ----KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
                PN VTY +II  LCK   VDKA E+   M    + P+ +TYNS++HGFC +    
Sbjct: 109 DQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPK 168

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           EA     +M   GV+P+VV++N +M+ LCKNG+  EA ++ + M + G++P+   Y TL+
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLL 228

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
            G+   G +     L   M   G   N + +SIL+  Y K +++E A+ ++S+M  +G+ 
Sbjct: 229 QGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLN 288

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P+ V Y T+   L +  +VE A   F++M   G+  D+  Y + I  LC      +A EL
Sbjct: 289 PNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEEL 348

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F  +      L    +N +ID  CK GR+  + +LF  + R  +  D++T          
Sbjct: 349 FLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL--------- 399

Query: 353 DGKMDKARDLFL 364
            G+ D+A+DLF+
Sbjct: 400 -GRNDEAKDLFV 410



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/311 (32%), Positives = 165/311 (53%), Gaps = 9/311 (2%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAK 115
           P+  +Y  +++GLC E    +A EL   M D+  +  P+VV+Y+++I+GF    D ++  
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK-- 106

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
                M+DQ + PNVV++N I+  LCK   +D+A  +L  M++ GV P+   YN+++ GF
Sbjct: 107 -----MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGF 161

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C +G+   A      M S G + +V +Y+ L++  CKN     A  ++  M  +G+KPD+
Sbjct: 162 CSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDI 221

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             Y TL  G      +     L D M R+G+  + + +   +    K   + EA+ +F  
Sbjct: 222 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSK 281

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +R      +   Y  +ID LCKSGR++ A   F  +    L  D + YN +IH+LC   K
Sbjct: 282 MRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDK 341

Query: 356 MDKARDLFLDM 366
            +KA +LFL+M
Sbjct: 342 WEKAEELFLEM 352



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 160/324 (49%), Gaps = 18/324 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EP+V TYN+L++ LC+ G    A  +F+ M           KP+  
Sbjct: 169 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG------LKPDIT 222

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+PN   ++ L+  +       EA  +F +M
Sbjct: 223 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 282

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN V++  +++ LCK+G++++A    E MI  G+RP++ VYN+L+   C+  + 
Sbjct: 283 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 342

Query: 182 NRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +AEELF+ M   G C   +F  SI I+ +CK   +  +  L+  M+  G+KPD++    
Sbjct: 343 EKAEELFLEMLDRGICLSTIFFNSI-IDSHCKEGRVIESGKLFDLMVRIGVKPDIIT--- 398

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                  + + + A  LF     +G+  + W YR   + +   G + E  +LF ++    
Sbjct: 399 -------LGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 451

Query: 301 YELDIRAYNCLIDGLCKSGRLKIA 324
             +D    N ++  L + G +  A
Sbjct: 452 CTVDSGMLNFIVRELLQRGEITRA 475



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 130/259 (50%), Gaps = 10/259 (3%)

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNT 170
           +A+ +F E++ +G+ P+V S+N+++N LC   +  EA  LL +M   G    P+   Y+T
Sbjct: 35  DARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           +++GF   G +++  +  +S        NV +Y+ +I   CK + ++ A+ + + M+  G
Sbjct: 94  VINGFFKEGDLDKMLDQRIS-------PNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           + PD + YN++  G     Q + A     +M+  GV  D   Y + +D LCKNG   EA 
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           ++F ++     + DI  Y  L+ G    G L     L   + R  +  +   ++I++ A 
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266

Query: 351 CADGKMDKARDLFLDMEAK 369
               K+++A  +F  M  +
Sbjct: 267 AKQEKVEEAMLVFSKMRQQ 285



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 79/209 (37%), Gaps = 54/209 (25%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEF 52
           EA  +F K+R  G  PN  TY T+I+ LC++G    A+  FE+M +          N   
Sbjct: 274 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLI 333

Query: 53  GVVCK--------------------PNTVTYTTIIDGLCKEGFV---------------- 76
             +C                      +T+ + +IID  CKEG V                
Sbjct: 334 HSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVK 393

Query: 77  ---------DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                    D+AK+LF+      + PN  TY  +           E   LF+ M D G  
Sbjct: 394 PDIITLGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCT 453

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELM 156
            +    N I+ EL + G++  A   L ++
Sbjct: 454 VDSGMLNFIVRELLQRGEITRAGTYLSMI 482


>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
          Length = 1014

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 199/435 (45%), Gaps = 76/435 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  KL   G  PNVF YN LI+ LC+      A  LF+EMA G G      +PN V
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEV 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  LCK G ++ A  LF KM+D+ I   V  YNSLI+G+C     + A+ L   M
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNG-----------------------------------KM 146
           + +G+ P   S++ ++  LC+NG                                   KM
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKM 494

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA+RL + MI   V PN   +N +++G+CL G + +A +L+  M  MG K + ++Y  L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554

Query: 207 INGYCKNKEIEGA-----------------------------------LSLYSEMLSKGI 231
           I+G C    +  A                                     L+ EM  +G+
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGV 614

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           K D+V +  +     + H  E++  LF EM+  GV  D   Y   ID L K   +++A+ 
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            +  + I  Y  +   +  LI+ LCKSG L  A  L + +  G ++ +  TYN  +    
Sbjct: 675 CWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 352 ADGKMDKARDLFLDM 366
            +G M+KA+DL   M
Sbjct: 735 TEGDMEKAKDLHSAM 749



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 117/386 (30%), Positives = 188/386 (48%), Gaps = 31/386 (8%)

Query: 14  GCEPNVFTYNTLINGLCR---------TGHTIVALNLFEEMANGN-------------GE 51
           G   +  TY TL+ G CR           H ++ L      AN +               
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 52  FGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           F + CK       PN   Y  +ID LCK    D A  LF +M    + PN VTY  LIH 
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C      +A CLF +M D+G++  V  +N ++N  CK G +D A  LL  M++ G+ P 
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           A  Y+ L+ G C  G ++ A EL   M   G   N ++++ LING+CK+K+++ A  L+ 
Sbjct: 443 AASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M+   + P+ V +N +  G   +  + +AF+L+D+M   G+  D + YR+ I GLC   
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP-RGVLIADVVTY 343
            + +A E    L      L+  +   L+ GL + GR    + L+  +  RGV + D+V++
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKL-DLVSF 621

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
            I+++A       +K+  LF +M+ +
Sbjct: 622 TIIVYAALKQHDKEKSCVLFREMKEQ 647



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 178/364 (48%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K+   G   + + Y   I   C + +   A  L   M +     GV  K + V 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE----GV--KASAVP 235

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++ GLCK   V +A E+   M +  +  + VTY +L++GFC   +   A  +  +M+
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+  + + +++EL K   ++EA  L   +  +G+ PN F YN L+D  C   R +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ LF  M   G + N  +Y+ILI+  CK   IE AL L+ +M  KGIK  V  YN+L 
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +   ++RA  L   M + G+     +Y   I GLC+NG +  A+EL R +      
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIA 475

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   +  LI+G CK  ++  A  LF  +    +I + VT+N+MI   C  G + KA  L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 363 FLDM 366
           +  M
Sbjct: 536 YDQM 539



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 163/343 (47%), Gaps = 35/343 (10%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  T + I+  L K      A++LF KM    ++ +   Y + I  +C + + + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-- 176
           + M  +GV+ + V +NV+M  LCKN ++ EA  +  +M+ IGV  +   Y TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 177 ----LTGRVN----------------------RAEELFVSMESMGCK-------HNVFSY 203
               +  R+                       R +EL     S+ CK        NVF+Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+  CKN+  + A  L+ EM  +G++P+ V Y  L   L +   +E A  LFD+M+ 
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+    + Y + I+G CK G +  A  L   +          +Y+ LI GLC++G L  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A EL R +    +  +  T+  +I+  C D KMD+A  LF  M
Sbjct: 462 AMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA LF K+      PN  T+N +I G C  G+   A  L+++M     E G+  KP+  
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV----EMGL--KPDNY 549

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLC    V KA E    +++     N  +  +L++G      + E   L+ EM
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEM 609

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++VSF +I+    K    +++  L   M + GV+P+   Y  ++D       +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A   +  M   G   N  ++++LIN  CK+  +  A  L  EML+  + P+   YN  
Sbjct: 670 IQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                    +E+A  L   M + G  A   ++   I GLCK G I EA++L R +    +
Sbjct: 730 LDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGF 788

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +Y+ +I  LCK G +  A+EL+  +    L  DVV YNI I      G+ DKA  
Sbjct: 789 SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALG 848

Query: 362 LFLDM 366
           ++ +M
Sbjct: 849 IYTNM 853



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 7/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  LF +++  G +P+   Y  +I+ L +  + I ALN +++M            PNTV
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDG------YSPNTV 689

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +I+ LCK G++  A+ L  +M   N+ PN  TYN  +  F    D  +AK L   M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   ++VSFN+++  LCK GK+ EA  L+  + + G  P+   Y+T++   C  G +
Sbjct: 750 L-QGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A EL+  M   G K +V +Y+I I     + E + AL +Y+ M+  G++P+   Y  L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 242 FIGL 245
             G+
Sbjct: 869 LSGI 872



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 153/298 (51%), Gaps = 7/298 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N F+   L+ GL R G      +L++EMA      GV  K + V++T I+    K+   +
Sbjct: 582 NNFSLTALLYGLFREGRFTETYHLWDEMAVR----GV--KLDLVSFTIIVYAALKQHDKE 635

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K+  LF +MK++ + P+ + Y  +I       +  +A   + +M+  G  PN V+  V++
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLI 695

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK+G +  A  L + M+   V PN F YN  +D F   G + +A++L  +M   G  
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHL 754

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ S++ILI G CK  +I+ A+ L  ++   G  PD + Y+T+   L ++  + +AF+L
Sbjct: 755 ASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++EM   G+  D  AY  FI     +G   +A+ ++  +     + +   Y  L+ G+
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 123/248 (49%)

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+  N  + + I+  L K  +   A  L + M+Q GV  + +VY   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+  D V Y TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ AYN LID LCK+ R   A  LF+ +    L  + VTY I+IHALC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 362 LFLDMEAK 369
           LF  M  K
Sbjct: 395 LFDKMRDK 402



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 129/276 (46%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I  N  T + ++        +  A+ LF +M+  GV  +   +   +   C++  +D A 
Sbjct: 159 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 218

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L+  M   GV+ +A  YN LM G C   RV  A E+   M ++G   +  +Y  L+ G+
Sbjct: 219 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 278

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+ +E+E AL +  +M+  G  P     + +   L +   VE AF L  ++   G+  + 
Sbjct: 279 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           +AY   ID LCKN    +A  LF+ +     E +   Y  LI  LCK G ++ A  LF  
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +   V  YN +I+  C  G +D+AR L   M
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 111/209 (53%), Gaps = 7/209 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A   + ++ + G  PN  T+  LIN LC++G+   A  L +EM  GN        PN 
Sbjct: 670 IQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN------VLPNK 723

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY   +D    EG ++KAK+L   M   ++  ++V++N LI G C A    EA  L  +
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMRK 782

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G  P+ +S++ I++ELCK G +++A  L   M+  G++P+   YN  +    + G 
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGE 842

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILING 209
            ++A  ++ +M   G + N  +Y  L++G
Sbjct: 843 SDKALGIYTNMIRSGVQPNWDTYRALLSG 871


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 202/399 (50%), Gaps = 41/399 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF +++     P+VF YN LI+GLC+      A  LF+EM            P+ +TY T
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM------LARRLLPSLITYNT 254

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK G  +K+ ++  +MK ++I P+++T+N+L+ G   A    +A+ +  EM D G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314

Query: 126 VQPNVVSFNVI-----------------------------------MNELCKNGKMDEAS 150
             P+  +F+++                                   +N LCK GK+++A 
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            +L   +  G+ PN  +YNT++DG+C  G +  A     +ME  G K +  +Y+ LI  +
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  E+E A    ++M  KG+ P V  YN L  G    ++ ++ F +  EM+ +G   + 
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
            +Y T I+ LCK   ++EA  + R +        +R YN LIDG C  G+++ A+   + 
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +  +  ++VTYN +I  L   GK+ +A DL L++  K
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK 593



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 184/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  +++  G  P+ FT++ L +G         AL ++E   +     GV  K N  
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS----GV--KMNAY 355

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +++ LCKEG ++KA+E+  +   + + PN V YN++I G+C   D   A+     M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG++P+ +++N ++   C+ G+M+ A + +  M   GV P+   YN L+ G+      
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++  ++   ME  G   NV SY  LIN  CK  ++  A  +  +M  +G+ P V IYN L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     ++E AF+   EM + G+  +   Y T IDGL   G + EA +L   +     
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  YN LI G   +G ++    L+  + R  +   + TY+++I +LC    ++    
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTER 654

Query: 362 LFLDMEAK 369
           LF +M  K
Sbjct: 655 LFGEMSLK 662



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 179/366 (48%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA LF  LR  G  P+  +   L++ L +T    V +N+F  +   +       +P+  
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD------FRPSKF 180

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   I    K   V K  ELF +MK + I P+V  YN LI G C     N+A+ LF EM
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + + P+++++N +++  CK G  +++ ++ E M    + P+   +NTL+ G    G V
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE +   M+ +G   + F++SIL +GY  N++ E AL +Y   +  G+K +    + L
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  ++E+A ++       G+  +   Y T IDG C+ G +V A      +     
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D  AYNCLI   C+ G ++ A +    +    +   V TYNI+I       + DK  D
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480

Query: 362 LFLDME 367
           +  +ME
Sbjct: 481 ILKEME 486



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 182/362 (50%), Gaps = 12/362 (3%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+++ G  P+V TYN LI G  R        ++ +EM + NG       PN V+Y T+I+
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED-NGTM-----PNVVSYGTLIN 502

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK   + +A+ +   M+D  ++P V  YN LI G C      +A     EM+ +G++ 
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N+V++N +++ L   GK+ EA  LL  + + G++P+ F YN+L+ G+   G V R   L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M+  G K  + +Y +LI+  C  + IE    L+ EM    +KPD+++YN + +  + +
Sbjct: 623 EEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGV-LHCYAV 677

Query: 249 H-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           H  +E+AF L  +M    +  D   Y + I G  K G + E   L   +   + E +   
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN ++ G C+      A+  +R +     + DV   N ++  L  + +  +A  +  +M 
Sbjct: 738 YNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797

Query: 368 AK 369
            +
Sbjct: 798 GR 799



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 6/289 (2%)

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            + +A +LF  +++E I P+  +   L+        +     +F+ +++   +P+   + 
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
             +    K   + +   L   M    + P+ F+YN L+DG C   R+N AE+LF  M + 
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
               ++ +Y+ LI+GYCK    E +  +   M +  I+P ++ +NTL  GLF+   VE A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC--LI 312
             +  EM+  G   D + +    DG   N     A+ ++ T   +   + + AY C  L+
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET--AVDSGVKMNAYTCSILL 361

Query: 313 DGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           + LCK G+++ A E+  R + +G L+ + V YN MI   C  G +  AR
Sbjct: 362 NALCKEGKIEKAEEILGREMAKG-LVPNEVIYNTMIDGYCRKGDLVGAR 409



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 10/280 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +   +   G  P V  YN LI+G C  G    A    +EM     E       N 
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL------NL 564

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+IDGL   G + +A++L L++  + + P+V TYNSLI G+ +A +      L+ E
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G++P + +++++++ LC    ++   RL     ++ ++P+  VYN ++  + + G 
Sbjct: 625 MKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFG---EMSLKPDLLVYNGVLHCYAVHGD 680

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A  L   M       +  +Y+ LI G  K  ++    SL  EM ++ ++P+   YN 
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +  G  E+     A+  + EMQ  G   D       + GL
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/277 (24%), Positives = 137/277 (49%), Gaps = 9/277 (3%)

Query: 96  VTYNSLIHGFCY---------ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           ++  SL H F Y         +   +EA  LF  + ++G+ P+  S  ++++ L K  + 
Sbjct: 101 LSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQF 160

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                +   +++   RP+ F+Y   +        V +  ELF  M+      +VF Y++L
Sbjct: 161 RVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVL 220

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK K +  A  L+ EML++ + P ++ YNTL  G  +    E++FK+ + M+   +
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI 280

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                 + T + GL K G + +A  + + ++ L +  D   ++ L DG   + + + A  
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++ +     +  +  T +I+++ALC +GK++KA ++ 
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 40/187 (21%), Positives = 92/187 (49%)

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A +LF ++ + G   +  S ++L++   K K+    ++++  +L    +P   +Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                 ++  V +  +LF+ M+   +    + Y   IDGLCK   + +A +LF  +   +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
               +  YN LIDG CK+G  + ++++   +    +   ++T+N ++  L   G ++ A 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 361 DLFLDME 367
           ++  +M+
Sbjct: 305 NVLKEMK 311



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 9/181 (4%)

Query: 184 AEELF--VSMESMGCKHNVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            +ELF   S+ S   KH+ FSY   S+L+N   ++K I  A  L+  + ++GI P     
Sbjct: 92  PKELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSL 147

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L   L +  Q      +F  +         + Y   I    K   + + +ELF  ++ 
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +    +  YN LIDGLCK  R+  A +LF  +    L+  ++TYN +I   C  G  +K
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267

Query: 359 A 359
           +
Sbjct: 268 S 268


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 182/354 (51%), Gaps = 8/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP+V TYNTL+ GLC+ G    A +LF  M       G    P+ VTYTT+ID  CK   
Sbjct: 73  EPDVVTYNTLLGGLCKNGRVAQACSLFGSME------GAGITPSDVTYTTLIDVFCKMCQ 126

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            + A  L   M     +P V +Y S+I+G C     ++A  LF EM   G +P+ V++N 
Sbjct: 127 FETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNT 186

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC   ++ EA  LL +M++   +P+   +  L++G C T R+  A  LF  M   G
Sbjct: 187 LIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG 246

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  ++ ++++L++  C  +++  ALS+            V++Y  +F  L      +RA 
Sbjct: 247 CAPDLVTHTVLVSKLCIRRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAA 304

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M R GVA +   Y  F  GL      + A   FR +     E D+ AYN L+DG 
Sbjct: 305 RLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 364

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK+ RL +A ++ R + +  L  ++VTYN ++   C  GK++   +L   M ++
Sbjct: 365 CKANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR 418



 Score =  170 bits (431), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 152/318 (47%), Gaps = 6/318 (1%)

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
           F   CKPN ++Y  ++  LC+ G +DKA     +M  E + P+V TYN +I   C A   
Sbjct: 2   FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 61

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           + A    IE  +   +P+VV++N ++  LCKNG++ +A  L   M   G+ P+   Y TL
Sbjct: 62  SRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 117

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D FC   +   A  L   M S  C   V+SY  +ING CKN++++ A  L+ EM   G 
Sbjct: 118 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 177

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KPD V YNTL  GL    ++  A  L   M  +    D   +   I+GLC    I EA  
Sbjct: 178 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFV 237

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LF+ +       D+  +  L+  LC   +L+ A  + R+ P       V+ Y  +   L 
Sbjct: 238 LFQGMAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYP--ACPEAVILYTPIFRELG 295

Query: 352 ADGKMDKARDLFLDMEAK 369
                D+A  L   M  +
Sbjct: 296 RRRGFDRAARLLQKMARR 313



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 146/319 (45%), Gaps = 74/319 (23%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P V++Y ++INGLC+      A  LFEEM          CKP+ VTY T+I GLC + 
Sbjct: 142 CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG------CKPDRVTYNTLIHGLCVKQ 195

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            + +AK+L   M + +  P+ +T+ +LI G C  +   EA  LF  M  QG  P++V+  
Sbjct: 196 RLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHT 255

Query: 135 VIMNELCKNGKM---------------------------------DEASRLLELMIQIGV 161
           V++++LC   K+                                 D A+RLL+ M + GV
Sbjct: 256 VLVSKLCIRRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV 315

Query: 162 RPN-----AF------------------------------VYNTLMDGFCLTGRVNRAEE 186
            PN     AF                               YN L+DGFC   R++ AE+
Sbjct: 316 APNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRLDMAEK 375

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +   M+  G   N+ +Y+ L+  +C+  ++E    L   M+S+G +PDV  ++TL  GLF
Sbjct: 376 MVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLF 435

Query: 247 EIHQVERAFKLFDEMQRHG 265
            + QV+ A+   +     G
Sbjct: 436 RVGQVDAAYSFLNLAMSQG 454



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 126/249 (50%), Gaps = 4/249 (1%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  Q  +PN +S+  ++  LC+ GK+D+A   +  M +  + P+ F YN ++D  C   R
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++RA E F +M     + +V +Y+ L+ G CKN  +  A SL+  M   GI P  V Y T
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     ++ Q E A+ L   M     +   ++Y + I+GLCKN  + +A +LF  +++  
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D   YN LI GLC   RL  A +L   +       D +T+  +I  LC   ++ +A 
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 361 DLFLDMEAK 369
            LF  M  +
Sbjct: 237 VLFQGMAKQ 245



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A   F ++   G EP++  YN L++G C+       L++ E+M     + G+   PN 
Sbjct: 336 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANR----LDMAEKMVRYMDQSGL--PPNI 389

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++   C++G V+   EL   M      P+V T+++L+ G       + A      
Sbjct: 390 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFRVGQVDAAYSFLNL 449

Query: 121 MMDQG 125
            M QG
Sbjct: 450 AMSQG 454


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 199/394 (50%), Gaps = 29/394 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-----ANGNGEFGVV- 55
           EA  L   +   G +P VFTYN +INGLC+TG  + A  + +EM     +     + ++ 
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470

Query: 56  ---CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              C+                    P+ V+++ +I  L K G +D+A + F  MK+  + 
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ V Y  LI GFC     +EA  +  EM++QG   +VV++N I+N LCK   + EA  L
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M + GV P+ + + TL++G+   G +N+A  LF  M     K +V +Y+ LI+G+CK
Sbjct: 591 FTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E+E    L+++M+S+ I P+ + Y  L  G   +  V  AF+L+DEM   G  A    
Sbjct: 651 GSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIIT 710

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
             T + G C+ G  V+A E    + +     D   YN LI+G  K   +  A+ L   + 
Sbjct: 711 CNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKME 770

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L+ DV+TYN++++     G+M +A  + L M
Sbjct: 771 NSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 804



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/367 (31%), Positives = 196/367 (53%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ ++   G + NV+T N +IN LC+        +   +M     E GV   P+ VT
Sbjct: 342 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME----EKGVF--PDVVT 395

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I+  C++G +++A EL   M  + + P V TYN++I+G C    +  AK +  EM+
Sbjct: 396 YNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEML 455

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  ++N+++ E C+N  M +A R+ + M   GV P+   ++ L+      G ++
Sbjct: 456 KIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLD 515

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A + F  M++ G   +   Y+ILI G+C+N  +  AL +  EML +G   DVV YNT+ 
Sbjct: 516 QALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTIL 575

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   +  A +LF EM   GV  D + + T I+G  K+G + +AV LF  +     +
Sbjct: 576 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLK 635

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  YN LIDG CK   ++   EL+  +    +  + ++Y I+I+  C  G + +A  L
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 695

Query: 363 FLDMEAK 369
           + +M  K
Sbjct: 696 WDEMVEK 702



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 181/353 (51%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYNTLIN  CR G    A  L + M+      G   KP   TY  II+GLCK 
Sbjct: 388 GVFPDVVTYNTLINAYCRQGLLEEAFELMDSMS------GKGLKPCVFTYNAIINGLCKT 441

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +AK +  +M    ++P+  TYN L+   C  ++  +A+ +F EM  QGV P++VSF
Sbjct: 442 GKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSF 501

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++  L KNG +D+A +    M   G+ P+  +Y  L+ GFC  G ++ A ++   M  
Sbjct: 502 SALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 561

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +V +Y+ ++NG CK K +  A  L++EM  +G+ PD   + TL  G  +   + +
Sbjct: 562 QGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNK 621

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LF+ M +  +  D   Y T IDG CK   + +  EL+  +   +   +  +Y  LI+
Sbjct: 622 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 681

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C  G +  A+ L+  +      A ++T N ++   C  G   KA +   +M
Sbjct: 682 GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNM 734



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 152/276 (55%), Gaps = 6/276 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  +V TYNT++NGLC+      A  LF EM     E GV   P+  T+TT+I+G  K+
Sbjct: 563 GCXLDVVTYNTILNGLCKEKMLSEADELFTEMT----ERGVF--PDFYTFTTLINGYXKD 616

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++KA  LF  M   N+ P+VVTYN+LI GFC  ++  +   L+ +M+ + + PN +S+
Sbjct: 617 GNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY 676

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            +++N  C  G + EA RL + M++ G        NT++ G+C  G   +A+E   +M  
Sbjct: 677 GILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 736

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  +Y+ LING+ K + ++ A +L ++M + G+ PDV+ YN +  G     +++ 
Sbjct: 737 KGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 796

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           A  +  +M   GV  D   Y + I+G      + EA
Sbjct: 797 AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEA 832



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 147/268 (54%), Gaps = 6/268 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P+ +T+ TLING  + G+   A+ LFE M   N       KP+ V
Sbjct: 586 EADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRN------LKPDVV 639

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG CK   ++K  EL+  M    I PN ++Y  LI+G+C     +EA  L+ EM
Sbjct: 640 TYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEM 699

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +  +++ N I+   C+ G   +A   L  M+  G+ P+   YNTL++GF     +
Sbjct: 700 VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENM 759

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  L   ME+ G   +V +Y++++NG+ +   ++ A  +  +M+ +G+ PD   Y +L
Sbjct: 760 DRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSL 819

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             G    + ++ AF++ DEM + G   D
Sbjct: 820 INGHVTQNNLKEAFRVHDEMLQRGFVPD 847



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 158/314 (50%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C  N + +  ++    +   + +  E F  +K + +  ++   NSL+ G       + A 
Sbjct: 284 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 343

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            ++ E++  GVQ NV + N+++N LCKN K++     L  M + GV P+   YNTL++ +
Sbjct: 344 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 403

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G +  A EL  SM   G K  VF+Y+ +ING CK  +   A  +  EML  G+ PD 
Sbjct: 404 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 463

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             YN L +       +  A ++FDEM   GV  D  ++   I  L KNG + +A++ FR 
Sbjct: 464 ATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRD 523

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++      D   Y  LI G C++G +  A ++   +       DVVTYN +++ LC +  
Sbjct: 524 MKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKM 583

Query: 356 MDKARDLFLDMEAK 369
           + +A +LF +M  +
Sbjct: 584 LSEADELFTEMTER 597



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 135/279 (48%), Gaps = 3/279 (1%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N   N + ++ L+  +  A    E    F  +  +G+  ++ + N ++  L K G +D A
Sbjct: 283 NCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 342

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             + + +++ GV+ N +  N +++  C   ++   +     ME  G   +V +Y+ LIN 
Sbjct: 343 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 402

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YC+   +E A  L   M  KG+KP V  YN +  GL +  +  RA  + DEM + G++ D
Sbjct: 403 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 462

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
           T  Y   +   C+N  +++A  +F  +       D+ +++ LI  L K+G L  A + FR
Sbjct: 463 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFR 522

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKA---RDLFLD 365
            +    L  D V Y I+I   C +G M +A   RD  L+
Sbjct: 523 DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 561



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 18/173 (10%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           KH++ S+S +I+   +++ +  A ++   M+ K     V I  +L +           F 
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNPLVFD 292

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L                RT++        + E  E FR L+     + I A N L+ GL 
Sbjct: 293 LL--------------VRTYVQAR----KLREGCEAFRVLKSKGLCVSINACNSLLGGLV 334

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G + +AWE+++ + R  +  +V T NIMI+ALC + K++  +    DME K
Sbjct: 335 KVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEK 387


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/393 (30%), Positives = 197/393 (50%), Gaps = 39/393 (9%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++   GC+P++F+Y  L+ GLC    +  AL+L   MA+  G     C  + V YTT
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGR----CPLDVVAYTT 212

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN-------------------------- 99
           +I+GL +EG +DKA  LF  M D   +P+VVTY+                          
Sbjct: 213 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272

Query: 100 ---------SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                    SL+HG+C +    EA  +F +M   GV+P+VV++  +M+ LCKNGK  EA 
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           ++ + +++ G +P++  Y TL+ G+   G +    +L   M   G +     +++++  Y
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K+ +++ AL ++S M  +G+ PD+V Y T+   L    +V+ A   F+ ++  G+A + 
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 452

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             + T I GLC      +  EL   +      LD   +N ++  LCK GR+  A  LF  
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           + R  +  +  TYN +I   C DGKMD+A  L 
Sbjct: 513 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLL 545



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   G  P+   Y +L++G C +G    A+ +F++M       GV  +P+ V
Sbjct: 260 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMC----RHGV--EPDVV 313

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D LCK G   +A+++F  +      P+  TY +L+HG+       E   L   M
Sbjct: 314 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM 373

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+Q     FN+IM    K+ K+DEA  +   M Q G+ P+   Y T++D  C  GRV
Sbjct: 374 MKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 433

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   F S++S G   N+  ++ LI+G C   + +    L  EM+ +GI  D + +N +
Sbjct: 434 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAI 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A  LFD M R G+  +T  Y T IDG C +G + EA++L   +     
Sbjct: 494 MGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV 553

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     YN +I+G  ++GR++    L R +    +   +VTY +++  L   G+   A++
Sbjct: 554 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKE 613

Query: 362 LFLDM 366
           L+L M
Sbjct: 614 LYLRM 618



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 175/348 (50%), Gaps = 9/348 (2%)

Query: 22  YNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           ++ L+ GLC    T  A+++    M     E G  CKP+  +YT ++ GLC +    +A 
Sbjct: 137 FSPLLKGLCDRRRTSDAMDIVLRRMP----ELG--CKPDLFSYTILLKGLCDDKTSQQAL 190

Query: 81  ELFLKMKDENIN-P-NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           +L   M D     P +VV Y ++I+G       ++A  LF  M+D+G  P+VV+++ I++
Sbjct: 191 DLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIIS 250

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            L K   MD+A+++   M++ GV P+  +Y +L+ G+C +G+   A  +F  M   G + 
Sbjct: 251 ALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEP 310

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +V +Y+ L++  CKN +   A  ++  ++ +G KPD   Y TL  G      +     L 
Sbjct: 311 DVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLL 370

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           D M + G+      +   +    K+  + EA+ +F  +R      DI  Y  ++D LC +
Sbjct: 371 DLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTA 430

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GR+  A   F SL    L  ++V +  +IH LC   K DK  +L  +M
Sbjct: 431 GRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEM 478



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPN 59
           +EA  LF  +   G EPN  TYNTLI+G C  G    A+ L   M  NG        KP+
Sbjct: 504 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG-------VKPS 556

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTY TII+G  + G ++    L  +M  + +NP +VTY  L+ G   A     AK L++
Sbjct: 557 DVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYL 616

Query: 120 EMM 122
            M+
Sbjct: 617 RMI 619


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 198/398 (49%), Gaps = 39/398 (9%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M    +  ++   GC+P++F+Y  L+ GLC    +  AL+L   MA+  G     C  + 
Sbjct: 153 MRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGR----CPLDV 208

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN--------------------- 99
           V YTT+I+GL +EG +DKA  LF  M D   +P+VVTY+                     
Sbjct: 209 VAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTR 268

Query: 100 --------------SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                         SL+HG+C +    EA  +F +M   GV+P+VV++  +M+ LCKNGK
Sbjct: 269 MVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGK 328

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             EA ++ + +++ G +P++  Y TL+ G+   G +    +L   M   G +     +++
Sbjct: 329 STEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNM 388

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++  Y K+ +++ AL ++S M  +G+ PD+V Y T+   L    +V+ A   F+ ++  G
Sbjct: 389 IMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEG 448

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +A +   + T I GLC      +  EL   +      LD   +N ++  LCK GR+  A 
Sbjct: 449 LAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAK 508

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            LF  + R  +  +  TYN +I   C DGKMD+A  L 
Sbjct: 509 NLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLL 546



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   G  P+   Y +L++G C +G    A+ +F++M       GV  +P+ V
Sbjct: 261 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMC----RHGV--EPDVV 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D LCK G   +A+++F  +      P+  TY +L+HG+       E   L   M
Sbjct: 315 TYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLM 374

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+Q     FN+IM    K+ K+DEA  +   M Q G+ P+   Y T++D  C  GRV
Sbjct: 375 MKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRV 434

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   F S++S G   N+  ++ LI+G C   + +    L  EM+ +GI  D + +N +
Sbjct: 435 DDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAI 494

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A  LFD M R G+  +T  Y T IDG C +G + EA++L   +     
Sbjct: 495 MGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGV 554

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     YN +I+G  ++GR++    L R +    +   +VTY +++  L   G+   A++
Sbjct: 555 KPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKE 614

Query: 362 LFLDM 366
           L+L M
Sbjct: 615 LYLRM 619



 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 175/354 (49%), Gaps = 10/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           EPN    ++    LC  G   + +++    M     E G  CKP+  +YT ++ GLC + 
Sbjct: 133 EPNPLQSSSQ-GPLCTAGGRAMRMDIVLRRMP----ELG--CKPDLFSYTILLKGLCDDK 185

Query: 75  FVDKAKELFLKMKDENIN-P-NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +A +L   M D     P +VV Y ++I+G       ++A  LF  M+D+G  P+VV+
Sbjct: 186 TSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVT 245

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ I++ L K   MD+A+++   M++ GV P+  +Y +L+ G+C +G+   A  +F  M 
Sbjct: 246 YSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMC 305

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + +V +Y+ L++  CKN +   A  ++  ++ +G KPD   Y TL  G      + 
Sbjct: 306 RHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALV 365

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
               L D M + G+      +   +    K+  + EA+ +F  +R      DI  Y  ++
Sbjct: 366 EMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVL 425

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           D LC +GR+  A   F SL    L  ++V +  +IH LC   K DK  +L  +M
Sbjct: 426 DILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEM 479



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/123 (37%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPN 59
           +EA  LF  +   G EPN  TYNTLI+G C  G    A+ L   M  NG        KP+
Sbjct: 505 IEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG-------VKPS 557

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTY TII+G  + G ++    L  +M  + +NP +VTY  L+ G   A     AK L++
Sbjct: 558 DVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYL 617

Query: 120 EMM 122
            M+
Sbjct: 618 RMI 620


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 189/354 (53%), Gaps = 6/354 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G +PNV +YNT+I+G    G+   A  + + M     E      P++ TY ++I G+CK
Sbjct: 202 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE------PDSYTYGSLISGMCK 255

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG +++A  LF KM +  + PN VTYN+LI G+C   D   A     EM+ +G+ P+V +
Sbjct: 256 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 315

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N++++ L   G+M EA  +++ M + G+ P+A  YN L++G+   G   RA +L   M 
Sbjct: 316 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEML 375

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G +    +Y+ LI    +   ++ A  L+ ++L +G+ PDV+++N +  G      VE
Sbjct: 376 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVE 435

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           RAF L  EM R  V  D   + T + G C+ G + EA  L   ++    + D  +YN LI
Sbjct: 436 RAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLI 495

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G  + G +K A+ +   +        ++TYN +I  LC + + D A +L  +M
Sbjct: 496 SGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 549



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 176/348 (50%), Gaps = 6/348 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +   +RV G EP+ +TY +LI+G+C+ G    A  LF++M     E G+V  PN VT
Sbjct: 227 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLV--PNAVT 280

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C +G +++A     +M  + I P+V TYN L+H         EA  +  EM 
Sbjct: 281 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 340

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ +++N+++N   + G    A  L   M+  G+ P    Y +L+       R+ 
Sbjct: 341 KKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 400

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++LF  +   G   +V  ++ +I+G+C N  +E A  L  EM  K + PD V +NTL 
Sbjct: 401 EADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 460

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     +VE A  L DEM+  G+  D  +Y T I G  + G I +A  +   +  + + 
Sbjct: 461 QGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFN 520

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
             +  YN LI  LCK+    +A EL + +    +  D  TY  +I  +
Sbjct: 521 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 159/307 (51%)

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           G+  KPN V+Y TII G    G ++ A+ +   M+ + I P+  TY SLI G C      
Sbjct: 201 GLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLE 260

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           EA  LF +M++ G+ PN V++N +++  C  G ++ A    + M++ G+ P+   YN L+
Sbjct: 261 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 320

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
               + GR+  A+++   M   G   +  +Y+ILINGY +    + A  L++EMLSKGI+
Sbjct: 321 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIE 380

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P  V Y +L   L   ++++ A  LF+++   GV+ D   +   IDG C NG +  A  L
Sbjct: 381 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFML 440

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
            + +       D   +N L+ G C+ G+++ A  L   +    +  D ++YN +I     
Sbjct: 441 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGR 500

Query: 353 DGKMDKA 359
            G +  A
Sbjct: 501 RGDIKDA 507



 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 161/297 (54%)

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG + KA+E    M+     PNVV+YN++IHG+    +   A+ +   M  +G++P+  +
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++ +CK G+++EAS L + M++IG+ PNA  YNTL+DG+C  G + RA      M 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   +V +Y++L++       +  A  +  EM  KGI PD + YN L  G       +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           RAF L +EM   G+      Y + I  L +   + EA +LF  +       D+  +N +I
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           DG C +G ++ A+ L + + R  +  D VT+N ++   C +GK+++AR L  +M+ +
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 158/314 (50%), Gaps = 6/314 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ LF K+   G  PN  TYNTLI+G C  G    A +  +EM       G++  P+  
Sbjct: 261 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK----GIM--PSVS 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++  L  EG + +A ++  +M+ + I P+ +TYN LI+G+    +   A  L  EM
Sbjct: 315 TYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEM 374

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++P  V++  ++  L +  +M EA  L E ++  GV P+  ++N ++DG C  G V
Sbjct: 375 LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNV 434

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA  L   M+      +  +++ L+ G C+  ++E A  L  EM  +GIKPD + YNTL
Sbjct: 435 ERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTL 494

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G      ++ AF + DEM   G       Y   I  LCKN     A EL + +     
Sbjct: 495 ISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGI 554

Query: 302 ELDIRAYNCLIDGL 315
             D   Y  LI+G+
Sbjct: 555 SPDDSTYLSLIEGM 568



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 63/193 (32%), Positives = 97/193 (50%)

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           L G++ +A E    ME +G K NV SY+ +I+GY     IEGA  +   M  KGI+PD  
Sbjct: 185 LEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y +L  G+ +  ++E A  LFD+M   G+  +   Y T IDG C  G +  A      +
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                   +  YN L+  L   GR+  A ++ + + +  +I D +TYNI+I+     G  
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364

Query: 357 DKARDLFLDMEAK 369
            +A DL  +M +K
Sbjct: 365 KRAFDLHNEMLSK 377


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 176/353 (49%), Gaps = 9/353 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ +TY  +I GLC  G    AL+L ++M +        C+P+ VTYT +++ +CK    
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG------CQPSVVTYTVLLEAVCKSTGF 196

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A E+  +M+ +   PN+VTYN +I+G C     ++A+     +   G QP+ VS+  +
Sbjct: 197 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 256

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC   + ++   L   M++    PN   ++ L+  FC  G V RA ++   M   GC
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N    +I+IN  CK   ++ A    + M S G  PD + Y T+  GL    + E A +
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  EM R     +   + TFI  LC+ G I +A  L   +     E++I  YN L++G C
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             GR+  A ELF S+P      + +TY  ++  LC   ++D A +L  +M  K
Sbjct: 437 VQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 9/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  +    G  P+V+    LI  LCR G T  A  +            V       
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVF------ 114

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ G C+ G +D A+ L   M    + P+  TY  +I G C      EA  L  +M
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+VV++ V++  +CK+    +A  +L+ M   G  PN   YN +++G C  GRV
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E    + S G + +  SY+ ++ G C  K  E    L++EM+ K   P+ V ++ L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                    VERA ++ ++M  HG AA+T      I+ +CK G + +A +    +     
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +Y  ++ GLC++ R + A EL + + R     + VT+N  I  LC  G +++A  
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 362 LFLDM 366
           L   M
Sbjct: 412 LIEQM 416



 Score =  180 bits (457), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 180/364 (49%), Gaps = 9/364 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++   GC  N    N +IN +C+ G    A      M    G +G  C P+T++
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM----GSYG--CSPDTIS 357

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++ GLC+    + AKEL  +M  +N  PN VT+N+ I   C      +A  L  +M 
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G + N+V++N ++N  C  G++D A   LEL   +  +PN   Y TL+ G C   R++
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLD 474

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M    C  NV ++++L++ +C+   ++ A+ L  +M+  G  P+++ YNTL 
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+      E A +L   +  +GV+ D   Y + I  L +   + EA+++F  ++ L   
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                YN ++  LCK      A + F  +     + + +TY  +I  L  +  + + RDL
Sbjct: 595 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 654

Query: 363 FLDM 366
             ++
Sbjct: 655 LREL 658



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 9/295 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++    C PN  T+NT I  LC+ G    A  L E+M+    E G  C+ N V
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIV 426

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++G C +G VD A ELF  M      PN +TY +L+ G C A   + A  L  EM
Sbjct: 427 TYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEM 483

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PNVV+FNV+++  C+ G MDEA  L+E M++ G  PN   YNTL+DG       
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNS 543

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   + S G   ++ +YS +I    +   +E A+ ++  +   G++P  VIYN +
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + L +    + A   F  M  +G   +   Y T I+GL    ++ E  +L R L
Sbjct: 604 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 139/265 (52%), Gaps = 9/265 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GCE N+ TYN L+NG C  G    AL LF         + + CKPNT+
Sbjct: 408 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---------YSMPCKPNTI 458

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ GLC    +D A EL  +M  ++  PNVVT+N L+  FC     +EA  L  +M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN++++N +++ +  +   +EA  LL  ++  GV P+   Y++++       RV
Sbjct: 519 MEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  ++ +G +     Y+ ++   CK    +GA+  ++ M+S G  P+ + Y TL
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
             GL     ++    L  E+   GV
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRGV 663



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 5/275 (1%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +PN    N+ +      +D  EA  L      +G  P+V     ++  LC+ G+  +A+R
Sbjct: 42  SPNPA--NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 99

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +L    + G   + F YNTL+ G+C  G+++ A  L  SM       + ++Y+ +I G C
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLC 156

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
               +  ALSL  +ML +G +P VV Y  L   + +     +A ++ DEM+  G   +  
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   I+G+C+ G + +A E    L    ++ D  +Y  ++ GLC + R +   ELF  +
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                + + VT+++++   C  G +++A  +   M
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 3/236 (1%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  +  L     + EA+RL++     G  P+ ++   L+   C  GR + A  +  + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +VF+Y+ L+ GYC+  +++ A  L + M    + PD   Y  +  GL +  +V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L D+M   G       Y   ++ +CK+    +A+E+   +R      +I  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G+C+ GR+  A E    L       D V+Y  ++  LCA  + +   +LF +M  K
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 178/339 (52%), Gaps = 12/339 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+ +T+N+LI G CRT    VA +LF++M   G  +       + V+Y  +I+G C+
Sbjct: 41  GWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQ-------DVVSYAALIEGFCE 93

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D+A ELF +M      P++  Y +L+ G C A    E   +   M + G +P+  +
Sbjct: 94  TGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRA 149

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  C   K  EA  +L+ M + G+ P       +++ +C  GR++ A  +   M+
Sbjct: 150 YAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMK 209

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GCK NV++Y+ L+ G+C   ++  A++L ++M   G+ PD V YN L  G      +E
Sbjct: 210 LRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIE 269

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF+L   M+  G+ AD + Y   I+ LCK+G   +A  LF +L     + +   +N LI
Sbjct: 270 SAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLI 329

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           +GLCKSG++ IAW+    +       D  TY+  I  LC
Sbjct: 330 NGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 185/399 (46%), Gaps = 45/399 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K+ + G   +V +Y  LI G C TG    A+ LF EM           +P+   
Sbjct: 65  ARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----------QPDMHM 114

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++ GLCK G  ++   +  +MK+    P+   Y +++   C+     EA+ +  EM 
Sbjct: 115 YAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMF 174

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P VV+   ++N  CK G+M +A R+LELM   G +PN + YN L+ GFC  G+V+
Sbjct: 175 EKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVH 234

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL---------------------- 220
           +A  L   M   G   +  +Y++LI G C +  IE A                       
Sbjct: 235 KAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294

Query: 221 -------------SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                        SL+  + ++GIKP+ V +N+L  GL +  +V+ A+K  ++M   G  
Sbjct: 295 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            DT+ Y +FI+ LCK     E +     +     +     Y  +I  L K     +    
Sbjct: 355 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 414

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  +       DVVTY   + A C +G++++A ++ ++M
Sbjct: 415 WGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEM 453



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 163/349 (46%), Gaps = 6/349 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G  P V T   +IN  C+ G    AL + E M          CKPN  
Sbjct: 165 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG------CKPNVW 218

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G C EG V KA  L  KM+   +NP+ VTYN LI G C       A  L   M
Sbjct: 219 TYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 278

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  +  ++N ++N LCK+G+ D+A  L + +   G++PNA  +N+L++G C +G+V
Sbjct: 279 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKV 338

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +    M S GC  + ++YS  I   CK K  +  LS   EML K +KP  V Y  +
Sbjct: 339 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 398

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +        + + EM   G   D   Y T +   C  G + EA  +   +     
Sbjct: 399 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 458

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +D  AYN L+DG    G+   A  + + +     + +  TY I++  L
Sbjct: 459 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 507



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 174/367 (47%), Gaps = 23/367 (6%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           +TYN LIN LC+ G T  A +LF+ +           KPN VT+ ++I+GLCK G VD A
Sbjct: 288 YTYNALINALCKDGRTDQACSLFDSLETRG------IKPNAVTFNSLINGLCKSGKVDIA 341

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            +   KM      P+  TY+S I   C      E      EM+ + V+P+ V++ +++++
Sbjct: 342 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 401

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L K       +R    M+  G  P+   Y T M  +C+ GR+N AE + + M   G   +
Sbjct: 402 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 461

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE------- 252
             +Y+ L++G+    + + A+S+  +M S    P+   Y  L   L  +  VE       
Sbjct: 462 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 521

Query: 253 ----------RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                       F LFD M+++    ++  Y + ++G  ++G   EA  L   ++     
Sbjct: 522 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 581

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           L+   Y  L+   CKS R   AW L  S+ +   I  +++Y  ++  L  +G+ DKA+++
Sbjct: 582 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI 641

Query: 363 FLDMEAK 369
           F++   K
Sbjct: 642 FMNSRWK 648



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 157/349 (44%), Gaps = 45/349 (12%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           TYN +I  LCR      AL     M           +P+  T+ ++I G C+   VD A+
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGW------RPDAYTFNSLIVGYCRTNQVDVAR 66

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +LF KM       +VV+Y +LI GFC     +EA  LF EM     QP++  +  ++  L
Sbjct: 67  DLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM----DQPDMHMYAALVKGL 122

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK G+ +E   +L  M ++G RP+   Y  ++D  C   +   AEE+   M   G    V
Sbjct: 123 CKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCV 182

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            + + +IN YCK   +  AL +   M  +G KP+V                         
Sbjct: 183 VTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNV------------------------- 217

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
                     W Y   + G C  G + +A+ L   +R+     D   YN LI G C  G 
Sbjct: 218 ----------WTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGH 267

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++ A+ L R +    LIAD  TYN +I+ALC DG+ D+A  LF  +E +
Sbjct: 268 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 316



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/401 (25%), Positives = 166/401 (41%), Gaps = 58/401 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF  L   G +PN  T+N+LINGLC++G   +A    E+M +        C P+T 
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAG------CTPDTY 358

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++ I+ LCK     +      +M  +++ P+ V Y  +IH      ++      + EM
Sbjct: 359 TYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEM 418

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++   M   C  G+++EA  +L  M + GV  +   YNTLMDG    G+ 
Sbjct: 419 VSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQT 478

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--------- 232
           + A  +   M S+    N F+Y IL+    + + +E  L L    + K I+         
Sbjct: 479 DHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFD 538

Query: 233 --------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQ---------------------- 262
                   P+   Y+++  G  E  + E A  L   M+                      
Sbjct: 539 VMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK 598

Query: 263 -------------RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
                        +HG      +Y+  + GL   G   +A E+F   R   Y  D   + 
Sbjct: 599 RYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWK 658

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +IDGL K G   I+ E+   L R        TY ++   L
Sbjct: 659 VIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEEL 699



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 6/101 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L   +   G  P++ +Y  L++GL   G T  A  +F  M +   ++     P+ 
Sbjct: 601 LDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIF--MNSRWKDYS----PDE 654

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
           + +  IIDGL K+G  D ++E+ + ++  N  P+  TY  L
Sbjct: 655 IVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAML 695


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 186/363 (51%), Gaps = 10/363 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G  P+V  YN ++ G C  G    AL  F       G+ G  CKPN  TY T+I+G
Sbjct: 105 MRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKF-------GKMGKTCKPNVATYNTVING 157

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK G +D A  LF ++  + ++P+  TY++L+HG C A     A  ++  M++     +
Sbjct: 158 LCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGD 217

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-LTGRVNRAEELF 188
             ++N + +  CK  ++DEA  +L+ MIQ   +P+   YN +++G C    R+  A  LF
Sbjct: 218 AGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLF 277

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M    C  N  +Y  +I G  K  E++  L L+  M   G+ PD   Y++L     ++
Sbjct: 278 QQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKV 337

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC--KNGYIVEAVELFRTLRILKYELDIR 306
            +++ A  +  +  R+ V  D + Y T I G C  +   + EA+ LF+ ++  +   ++ 
Sbjct: 338 RKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVI 397

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            YN ++ GLCK+GR   A+++F+ + +     + +T+ +M   +    K DK   +F+DM
Sbjct: 398 TYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDM 457

Query: 367 EAK 369
             K
Sbjct: 458 VYK 460



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 184/391 (47%), Gaps = 45/391 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +V+ Y  L++ L R   T  A+  F+       E    C+P+  ++T II   C  
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKR------ELCAHCRPSLYSFTIIIQCFCNV 92

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               +A      M+   I P+V  YN ++ G+C       A   F + M +  +PNV ++
Sbjct: 93  RNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGK-MGKTCKPNVATY 151

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM--------------------- 172
           N ++N LCK GK+D A  L   +    V P+ F Y+TL+                     
Sbjct: 152 NTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLE 211

Query: 173 --------------DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK-EIE 217
                         DGFC   RV+ A E+  +M    CK +V +Y+ +ING C+ K  IE
Sbjct: 212 ANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIE 271

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  L+ +M+     P+ V Y T+ +GL +I++V+R  +LF  M + G++ D +AY + I
Sbjct: 272 EAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLI 331

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI--AWELFRSLPRGV 335
               K   + EA  + +         D+  Y  LI G C++ + ++  A  LF+++    
Sbjct: 332 YAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRR 391

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  +V+TYNI++  LC  G+ D+A  +F +M
Sbjct: 392 VWPNVITYNIVLRGLCKTGRFDEAYQIFQEM 422



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 139/282 (49%), Gaps = 2/282 (0%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           K E    +V  Y  L+H    A    EA   F   +    +P++ SF +I+   C     
Sbjct: 36  KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
             A R L  M  +G+ P+   YN ++ G+C  GRV RA   F  M    CK NV +Y+ +
Sbjct: 96  GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTV 154

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ING CK  +I+ A+ L++ +    + PD   Y+TL  GL +  ++E A K++D M     
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK-SGRLKIAW 325
             D  AY    DG CK   + EA+E+ +T+   + +  +  YNC+I+G+C+   R++ A+
Sbjct: 215 DGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAY 274

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            LF+ +       + VTY  MI  L    ++ +  +LF  M 
Sbjct: 275 RLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMS 316



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 150/286 (52%), Gaps = 19/286 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM--ANGNGEFGVVCKPNT 60
           A  LF +L     +P+ FTY+TL++GLC+      A+ +++ M  AN +G+ G       
Sbjct: 167 AVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAG------- 219

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC-YANDWNEAKCLFI 119
             Y  + DG CKE  VD+A E+   M      P+VVTYN +I+G C Y N   EA  LF 
Sbjct: 220 -AYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQ 278

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL---MIQIGVRPNAFVYNTLMDGFC 176
           +M+     PN V++  ++  L    K+ E  R LEL   M + G+ P+ + Y++L+  F 
Sbjct: 279 QMVGSDCPPNAVTYGTMILGL---SKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFV 335

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE--IEGALSLYSEMLSKGIKPD 234
              +++ A+ +           +V+ Y+ LI+GYC+ ++  ++ AL L+  M  + + P+
Sbjct: 336 KVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPN 395

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           V+ YN +  GL +  + + A+++F EM +   + +   ++    G+
Sbjct: 396 VITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGM 441



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 113/219 (51%), Gaps = 9/219 (4%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIV-ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           C+P+V TYN +ING+C+  + I  A  LF++M   +      C PN VTY T+I GL K 
Sbjct: 249 CKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSD------CPPNAVTYGTMILGLSKI 302

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V +  ELF  M    ++P+   Y+SLI+ F      +EAK +  +     V P+V  +
Sbjct: 303 YEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMY 362

Query: 134 NVIMNELCKNGK--MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
             +++  C+  K  +DEA  L + M    V PN   YN ++ G C TGR + A ++F  M
Sbjct: 363 TTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEM 422

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
             + C  N  ++ ++  G    ++ +    ++ +M+ KG
Sbjct: 423 FKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVYKG 461



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 80/170 (47%), Gaps = 1/170 (0%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           S +  G +H+V+ Y+ L++   + +    A+  +   L    +P +  +  +      + 
Sbjct: 34  SSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVR 93

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
              RA++    M+  G+  D  AY   + G C  G +  A+  F  +     + ++  YN
Sbjct: 94  NPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCKPNVATYN 152

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +I+GLCK G++  A  LF  LP  ++  D  TY+ ++H LC   +++ A
Sbjct: 153 TVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAA 202


>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
          Length = 332

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 168/297 (56%), Gaps = 10/297 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A AL  ++   G +P    Y T+INGLC+ G T  ALNL  +M   +       K + 
Sbjct: 27  LQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETH------IKAHV 76

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  IID LCK+G    A+ LF +M D+ I P+V+TY+ +I  FC +  W +A+ L  +
Sbjct: 77  VIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRD 136

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV+F+ ++N L K GK+ EA  +   M++ G+ P    YN+++DGFC   R
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A+ +  SM S  C  +V ++S LINGYCK K ++  + ++ EM  +GI  + V Y T
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           L  G  ++  ++ A  L + M   GVA +   +++ +  LC    + +A  +   L+
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 158/312 (50%), Gaps = 4/312 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P+ VT+TT+++GLC EG V +A  L  +M +E   P    Y ++I+G C   D   A 
Sbjct: 6   CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M +  ++ +VV +N I++ LCK+G    A  L   M   G+ P+   Y+ ++D F
Sbjct: 62  NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C +GR   AE+L   M       +V ++S LIN   K  ++  A  +Y +ML +GI P  
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + YN++  G  +  ++  A ++ D M     + D   + T I+G CK   +   +E+F  
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +       +   Y  LI G C+ G L  A +L   +    +  + +T+  M+ +LC+  +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301

Query: 356 MDKARDLFLDME 367
           + KA  +  D++
Sbjct: 302 LRKAFAILEDLQ 313



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 150/264 (56%), Gaps = 6/264 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  K+     + +V  YN +I+ LC+ GH I A NLF EM +  G F     P+ +T
Sbjct: 60  ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD-KGIF-----PDVIT 113

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +ID  C+ G    A++L   M +  INP+VVT+++LI+        +EA+ ++ +M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P  +++N +++  CK  ++++A R+L+ M      P+   ++TL++G+C   RV+
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              E+F  M   G   N  +Y+ LI+G+C+  +++ A  L + M+S G+ P+ + + ++ 
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293

Query: 243 IGLFEIHQVERAFKLFDEMQRHGV 266
             L    ++ +AF + +++Q+  V
Sbjct: 294 ASLCSKKELRKAFAILEDLQKSEV 317



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 144/278 (51%), Gaps = 4/278 (1%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M +    P+VVT+ +L++G C      +A  L   M+++G QP    +  I+N LCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            + A  LL  M +  ++ +  +YN ++D  C  G    A+ LF  M   G   +V +YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+ +C++     A  L  +M+ + I PDVV ++ L   L +  +V  A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +   T  Y + IDG CK   + +A  +  ++       D+  ++ LI+G CK+ R+    
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           E+F  + R  ++A+ VTY  +IH  C  G +D A+DL 
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274



 Score =  134 bits (337), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 121/236 (51%), Gaps = 6/236 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  LF ++   G  P+V TY+ +I+  CR+G    A  L  +M            P+ 
Sbjct: 93  IHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQ------INPDV 146

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT++ +I+ L KEG V +A+E++  M    I P  +TYNS+I GFC  +  N+AK +   
Sbjct: 147 VTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDS 206

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +   P+VV+F+ ++N  CK  ++D    +   M + G+  N   Y TL+ GFC  G 
Sbjct: 207 MASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGD 266

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           ++ A++L   M S G   N  ++  ++   C  KE+  A ++  ++    + P +V
Sbjct: 267 LDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRIV 322



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 127/250 (50%), Gaps = 6/250 (2%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G +P+VV+F  +MN LC  G++ +A  L++ M++ G +P    Y T+++G C  G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  L   ME    K +V  Y+ +I+  CK+     A +L++EM  KGI PDV+ Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRIL 299
           +        +   A +L  +M    +  D   +   I+ L K G + EA E++   LR  
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +   I  YN +IDG CK  RL  A  +  S+       DVVT++ +I+  C   ++D  
Sbjct: 177 IFPTTI-TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235

Query: 360 RDLFLDMEAK 369
            ++F +M  +
Sbjct: 236 MEIFCEMHRR 245


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/398 (30%), Positives = 197/398 (49%), Gaps = 41/398 (10%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L   ++ F C+P+V+ YN LIN  C  G T  AL     M + NG     C P+ VT+ 
Sbjct: 170 SLLCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMID-NG-----CTPSLVTFG 223

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+  C +G + +A+ LF  MK+    PNVV YN+L++G+  A D  +A  L+ EM  +
Sbjct: 224 TVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSK 283

Query: 125 GVQPNVVSFNVIM-----------------------------------NELCKNGKMDEA 149
            V P+  +FN+++                                   + LC  G +DEA
Sbjct: 284 AVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEA 343

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
            + LE M++ G+ P    +N+++  +   G   +A + +  M   G   +  + S LI G
Sbjct: 344 MKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMG 403

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             K   ++ A  L  EM+ +G+  +   +  L  G F +  V  A+ L++EM+  G+  D
Sbjct: 404 LSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPD 463

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
             A+  FI+GL   G + EA ++F  +    +  +   YN LI G C SGRL+ A  L R
Sbjct: 464 AVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLER 523

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            + R  L+ D+ T NI+I+ LC +G+M  A D+F +M 
Sbjct: 524 EMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMH 561



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 180/351 (51%), Gaps = 6/351 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           MEA  LF  ++  G  PNV  YNTL+NG  +      A  L+EEM +          P+ 
Sbjct: 236 MEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSK------AVAPDC 289

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  ++ G  + G  +    L   +           YN  + G C+A   +EA     +
Sbjct: 290 TTFNILVAGHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLED 349

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ P VV+FN I+    + G  ++A +   +M++ G+ P++   ++L+ G     R
Sbjct: 350 MLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWR 409

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   M   G   N  ++++L++GY +  ++ GA SL++EM  +GI PD V ++ 
Sbjct: 410 LQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSA 469

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
              GL  +  V+ A+ +F +M + G   + + Y + I G C +G + EA+ L R +    
Sbjct: 470 FINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKG 529

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
              DI   N +I+GLCK GR+K A ++FR++    LI D+VTYN +I   C
Sbjct: 530 LLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYC 580



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 161/332 (48%), Gaps = 6/332 (1%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           YN  ++GLC  G    A+   E+M     E G+   P  V + +II    + G  +KA +
Sbjct: 327 YNICVSGLCWAGWLDEAMKFLEDML----EKGIT--PTVVAFNSIIAAYSRAGLEEKAYK 380

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
            +  M    + P+ +T +SLI G        EA+ L  EM+ +G+  N  +F ++++   
Sbjct: 381 AYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYF 440

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           + G +  A  L   M   G+ P+A  ++  ++G  + G V+ A ++F+ M   G   N F
Sbjct: 441 RMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNF 500

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            Y+ LI G+C +  ++ AL L  EM  KG+ PD+   N +  GL +  +++ A  +F  M
Sbjct: 501 VYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNM 560

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              G+  D   Y T IDG CK    V   E+   +    ++ DI  YN  + GLC   ++
Sbjct: 561 HHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKM 620

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             A  +   L    ++ D VTYN +++ +C D
Sbjct: 621 SRAVMMLEELISAGVVPDTVTYNTVMNGVCTD 652



 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/212 (35%), Positives = 116/212 (54%), Gaps = 7/212 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F+++   G  PN F YN+LI G C +G    AL L  EMA      G++  P+  
Sbjct: 482 EAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARK----GLL--PDIF 535

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   II+GLCKEG +  A ++F  M    + P++VTYN+LI G+C A D      +  +M
Sbjct: 536 TTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVNKM 595

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P++ ++N+ ++ LC   KM  A  +LE +I  GV P+   YNT+M+G C T  +
Sbjct: 596 YATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVC-TDVL 654

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
            RA  +   +  M    NV + ++L++ +CK 
Sbjct: 655 ERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQ 686



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 164/360 (45%), Gaps = 6/360 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           FM  R    E +    +TL+ G  +      AL +   M     E G+  +P++   T +
Sbjct: 67  FMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMR----EVGL--RPSSSAITIL 120

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
              L + G      +L   M  +   P    +N++I GFC        + L   M     
Sbjct: 121 FKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKC 180

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           QP+V ++N+++N  C  G+  +A   +  MI  G  P+   + T+++ FC  G +  A  
Sbjct: 181 QPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMMEARN 240

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           LF  M+  G   NV  Y+ L+NGY K ++I  A  LY EM SK + PD   +N L  G +
Sbjct: 241 LFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHY 300

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              + E   +L  ++ + G  + +  Y   + GLC  G++ EA++    +        + 
Sbjct: 301 RYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVV 360

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A+N +I    ++G  + A++ +R + +  L    +T + +I  L    ++ +ARDL  +M
Sbjct: 361 AFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEM 420



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 132/296 (44%), Gaps = 2/296 (0%)

Query: 76  VDKAKEL--FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           VD+++E+  F+  +      +    ++L+ GF       EA  +   M + G++P+  + 
Sbjct: 58  VDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAI 117

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++   L + G      +LL  MI  G RP    +N ++ GFC  G V   E L   M+ 
Sbjct: 118 TILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK 177

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C+ +V++Y+ILIN YC   +   AL     M+  G  P +V + T+         +  
Sbjct: 178 FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMME 237

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LFD M+  G   +   Y T ++G  K   I +A  L+  ++      D   +N L+ 
Sbjct: 238 ARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVA 297

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G  + GR +    L R L +   ++    YNI +  LC  G +D+A     DM  K
Sbjct: 298 GHYRYGREEDRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEK 353



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 40/177 (22%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P++FT N +INGLC+ G    A ++F  M +     G++  P+ V
Sbjct: 517 EALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHT----GLI--PDIV 570

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG CK        E+  KM     +P++ TYN  +HG C     + A  +  E+
Sbjct: 571 TYNTLIDGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEEL 630

Query: 122 MDQGVQP----------------------------------NVVSFNVIMNELCKNG 144
           +  GV P                                  NVV+ N++++  CK G
Sbjct: 631 ISAGVVPDTVTYNTVMNGVCTDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQG 687


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 190/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++  G +P++ TYN+L+ G C+ G    A+ L+ EM           KPN V
Sbjct: 419 EALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEG------FKPNVV 472

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +   D A  L  +MK   ++ N  TYN LI+G C  +   E   +    
Sbjct: 473 TYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSF 532

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G  P ++++N I+N   K G M  A  + + M + G+ PN   Y + +DG+C TG  
Sbjct: 533 MSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCS 592

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   +   G + ++ +Y+ LING+C+   +  AL L   +L  G+ P+ V+YN+L
Sbjct: 593 DMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSL 652

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   ++ ++   K ++ M + G+ ADT  Y T IDG  K+G +  A+EL+  +    Y
Sbjct: 653 ITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGY 712

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +  L  GLC+SG +  A +L   + R  +  +V  YN++I+    D K+ +A  
Sbjct: 713 IPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFR 772

Query: 362 LFLDM 366
           L  +M
Sbjct: 773 LHDEM 777



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 177/356 (49%), Gaps = 7/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ F  + ++ GL        A+ LFEEMA+          P+  TY  +I   C+ 
Sbjct: 362 GLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-------LPDVFTYNNLIHWHCQA 414

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A  LF +MK   + P++ TYNSL+ G+C     +EA  L+ EM  +G +PNVV++
Sbjct: 415 HKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTY 474

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M         D A  LL+ M Q GV  N + YN L++G C+  RV   + +  S  S
Sbjct: 475 ITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMS 534

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    + +Y+ +ING+ K   +  A ++Y +M  KG+ P+++ Y +   G       + 
Sbjct: 535 EGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDM 594

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K+ ++++R G+  D  AY   I+G C+ G +  A++L   L       +   YN LI 
Sbjct: 595 ALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLIT 654

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G      +K   + + S+ +G ++AD  TY  +I     DG +  A +L+ +M AK
Sbjct: 655 GYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAK 710



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 175/363 (48%), Gaps = 7/363 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++R  G + +V    TL+ G C       ALNLF+E        G+V  P  V
Sbjct: 280 EALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKD----GIV--PTKV 333

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G  + G   KA EL  +M  + + P+    + ++ G      W +A CLF EM
Sbjct: 334 MYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEM 393

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+V ++N +++  C+  K+ EA  L + M + GV+P+   YN+L+ G+C  G +
Sbjct: 394 ADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCM 452

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L+  M   G K NV +Y  L+ GY   K+ + A +L  EM   G+  +   YN L
Sbjct: 453 DEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVL 512

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+  + +V     +       G       Y + I+G  K G +  A  +++ +R    
Sbjct: 513 INGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGL 572

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  Y   IDG C++G   +A ++   + R  L  D+V YN +I+  C +G M  A  
Sbjct: 573 PPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQ 632

Query: 362 LFL 364
           L +
Sbjct: 633 LLV 635



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 164/311 (52%), Gaps = 8/311 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTV 61
           A AL  +++  G   N +TYN LING+C          + +  M+ G         P  +
Sbjct: 490 AYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEG-------FIPTMM 542

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +II+G  K G +  A  ++ +M+++ + PN++TY S I G+C     + A  +  ++
Sbjct: 543 TYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDV 602

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+QP++V++N ++N  C+ G M  A +LL ++++ G+ PN  VYN+L+ G+     +
Sbjct: 603 RRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMM 662

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               + + SM   G   +  +Y+ LI+G+ K+  +  AL LYSEM++KG  PD   +  L
Sbjct: 663 KEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTAL 722

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL     ++ A KL +EM+R  V  + + Y   I+G  ++  + EA  L   +  +  
Sbjct: 723 THGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGI 782

Query: 302 ELDIRAYNCLI 312
           + D   Y+ L+
Sbjct: 783 QPDDTTYDILV 793



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 146/315 (46%), Gaps = 3/315 (0%)

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           GVV  P+  + T ++    +      A  LF++M+      +   +++L+          
Sbjct: 152 GVV--PDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHE 209

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A  LF EM    + P+   + + +  LCK G    A R+L  M ++G     F Y T++
Sbjct: 210 DAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMV 269

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           D    TGR+  A  +   M   G K +V   + L+ GYC  +E+  AL+L+ E L  GI 
Sbjct: 270 DVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIV 329

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P  V+Y  L  G  ++   ++A++L  +M   G+   T+     + GL  +    +AV L
Sbjct: 330 PTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCL 389

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F  +       D+  YN LI   C++ +L+ A  LF  + +  +   + TYN ++   C 
Sbjct: 390 FEEMADSGLP-DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCK 448

Query: 353 DGKMDKARDLFLDME 367
            G MD+A  L+ +M 
Sbjct: 449 KGCMDEAVKLYSEMP 463



 Score =  118 bits (296), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/242 (28%), Positives = 120/242 (49%), Gaps = 41/242 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  ++ ++R  G  PN+ TY + I+G CRTG + +AL +  ++           +P+ V
Sbjct: 559 SAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRG------LQPDIV 612

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF---------------- 105
            Y  +I+G C+EG +  A +L + +  + + PN V YNSLI G+                
Sbjct: 613 AYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESM 672

Query: 106 -----------------CYANDWNEAKCL--FIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                             ++ D N A  L  + EMM +G  P+  +F  + + LC++G +
Sbjct: 673 IKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDI 732

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A +LLE M ++ VRPN F+YN L++G+    ++  A  L   M +MG + +  +Y IL
Sbjct: 733 DGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDIL 792

Query: 207 IN 208
           ++
Sbjct: 793 VS 794



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 72/126 (57%), Gaps = 6/126 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +  TY TLI+G  + G+   AL L+ EM       G +  P+  T+T +  GLC+ 
Sbjct: 676 GIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAK----GYI--PDAFTFTALTHGLCRS 729

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D AK+L  +M+  ++ PNV  YN LI+G+       EA  L  EM++ G+QP+  ++
Sbjct: 730 GDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTY 789

Query: 134 NVIMNE 139
           ++++++
Sbjct: 790 DILVSK 795


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/339 (32%), Positives = 181/339 (53%), Gaps = 12/339 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+ FT+N+LI G CRT    VA +LF++M   G  +       + V+Y  +I+G C+
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQ-------DAVSYAALIEGFCE 211

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G VD+A ELF +++     P++ T+ +L+ G C A    E   +  +M + G +P   +
Sbjct: 212 TGRVDEALELFRELE----QPDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRA 267

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  C+  K +EA ++L  M   G+ P A     +++ +C  GR++ A  +F SM+
Sbjct: 268 YAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMK 327

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC+ NV++Y+ ++ G+C   ++  A++L  +M   G++PDVV YN L  G      +E
Sbjct: 328 LKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIE 387

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF+L   M+ +G+AAD + Y   ID LCK G + EA  LF  L       +   +N +I
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           +GLCK G+  +A      +       D  TY+  I  LC
Sbjct: 448 NGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLC 486



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/358 (29%), Positives = 170/358 (47%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   +  K++  G  P    Y  L++  CR      A  +  EM +     G+V  P  V
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDN----GLV--PCAV 301

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T T +++  C+EG +  A  +F  MK +   PNV TYN+++ GFC      +A  L  +M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV+P+VV++N+++   C +G ++ A RLL LM   G+  + + YN L+D  C TG+V
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  +E  G + N  +++ +ING CK  + + A +   +M+S G  PD   Y+  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPF 481

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +           DEM +  V   T  Y   ID L K      A  ++  +  L  
Sbjct: 482 IENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGC 541

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             D+  Y   +   C  GRL  A  +   + +G +I D + YN +I    + GK D A
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 165/343 (48%), Gaps = 10/343 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P   TYN LI  LCR      A      M           +P+  T+ ++I G C+   +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGW------RPDAFTFNSLILGYCRTQQL 180

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A++LF KM     + + V+Y +LI GFC     +EA  LF E+     QP++ +   +
Sbjct: 181 DVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAAL 236

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC   + +E   +L+ M ++G RP    Y  L+D +C   +   AE++   M   G 
Sbjct: 237 VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGL 296

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
                + + ++N YC+   + GA+ ++  M  KG +P+V  YN +  G   + +V +A  
Sbjct: 297 VPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMA 356

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D+M+  GV  D   Y   I G C +G+I  A  L R +       D   YN LID LC
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K+G++  A  LF  L    +  + VT+N +I+ LC  GK D A
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVA 459



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 187/390 (47%), Gaps = 25/390 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------- 49
           A  LF K+ + G   +  +Y  LI G C TG    AL LF E+   +             
Sbjct: 183 AQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCD 242

Query: 50  ---GEFGVV---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
              GE G+           +P T  Y  ++D  C+E   ++A+++  +M D  + P  VT
Sbjct: 243 ARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVT 302

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
             ++++ +C     + A  +F  M  +G +PNV ++N ++   C  GK+ +A  LL+ M 
Sbjct: 303 CTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR 362

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           + GV P+   YN L+ G C+ G +  A  L   ME  G   + ++Y++LI+  CK  +++
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A SL+  +  +GI+P+ V +NT+  GL +  + + A    ++M   G A DT+ Y  FI
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFI 482

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           + LCK     E +     +     +     Y  +ID L K     +A  ++  +      
Sbjct: 483 ENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCS 542

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
            DVVTY   + A C +G++ +A ++ ++M+
Sbjct: 543 PDVVTYTTSVRAYCNEGRLHEAENVVMEMK 572



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 152/318 (47%), Gaps = 6/318 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P   T   ++N  CR G    A+ +FE M          C+PN  TY  ++ G C  
Sbjct: 295 GLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKG------CEPNVWTYNAMVQGFCNV 348

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V KA  L  +M++  + P+VVTYN LI G C       A  L   M   G+  +  ++
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTY 408

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           NV+++ LCK GK+DEA  L + +   G+RPN+  +NT+++G C  G+ + A      M S
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVS 468

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  + ++YS  I   CK K     LS   EML K +KP  V Y  +   LF+      
Sbjct: 469 AGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGL 528

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +++ +M   G + D   Y T +   C  G + EA  +   ++     +D  AYN LID
Sbjct: 529 ATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLID 588

Query: 314 GLCKSGRLKIAWELFRSL 331
           G    G+   A  + + +
Sbjct: 589 GHTSIGKTDHAVTILKHM 606



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 9/349 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T+ +L+    R   T + L LF  M +          P   TY  +I  LC+   +  A+
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPP-----APTGATYNALIRALCRRADLRHAQ 149

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
                M      P+  T+NSLI G+C     + A+ LF +M  +G   + VS+  ++   
Sbjct: 150 RYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGF 209

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+ G++DEA  L   + Q    P+ + +  L+ G C   R      +   M+ +G +   
Sbjct: 210 CETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPAT 265

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ L++ +C+ ++ E A  + +EM   G+ P  V    +        ++  A ++F+ 
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G   + W Y   + G C  G + +A+ L   +R    E D+  YN LI G C  G 
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++ A+ L R +    L AD  TYN++I ALC  GK+D+A  LF  +E +
Sbjct: 386 IESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYR 434



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 189/453 (41%), Gaps = 92/453 (20%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +++ GCEPNV+TYN ++ G C  G    A+ L ++M     E GV  +P+ VT
Sbjct: 319 AVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMR----ECGV--EPDVVT 372

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I G C +G ++ A  L   M+   +  +  TYN LI   C     +EA  LF  + 
Sbjct: 373 YNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT---- 178
            +G++PN V+FN ++N LCK GK D A   LE M+  G  P+ + Y+  ++  C T    
Sbjct: 433 YRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSR 492

Query: 179 ----------------GRVNR---------------AEELFVSMESMGCKHNVFSYSILI 207
                             VN                A  ++  M S+GC  +V +Y+  +
Sbjct: 493 EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSV 552

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA------------- 254
             YC    +  A ++  EM   GI  D + YNTL  G   I + + A             
Sbjct: 553 RAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASM 612

Query: 255 --------------------------------------FKLFDEMQRHGVAADTWAYRTF 276
                                                 F+LF+ M+++ V +   AY   
Sbjct: 613 PNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAI 672

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           ++G  +   + E   L   ++     L+   Y  L++  CK      AW L  S+     
Sbjct: 673 LEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGF 732

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + ++++Y  ++    A+G+ D+A+++F  +  K
Sbjct: 733 LPNLISYQYLLSGFTAEGQADRAKEIFRGLRWK 765



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 57/369 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF  L   G  PN  T+NT+INGLC+ G   VA    E+M +        C P+T 
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAG------CAPDTY 476

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+  I+ LCK     +      +M  +++ P+ V Y  +I       ++  A  ++ +M
Sbjct: 477 TYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++   +   C  G++ EA  ++  M + G+  +A  YNTL+DG    G+ 
Sbjct: 537 VSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKT 596

Query: 182 NRAE---------------------------------------------------ELFVS 190
           + A                                                    ELF  
Sbjct: 597 DHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFEL 656

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M+      +  +Y  ++ G+ + + ++   SL S M    +  +  IY +L     ++  
Sbjct: 657 MKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRM 716

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
              A+ L   M  HG   +  +Y+  + G    G    A E+FR LR  +Y  D   +  
Sbjct: 717 YPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKI 776

Query: 311 LIDGLCKSG 319
           +IDGL + G
Sbjct: 777 IIDGLIRQG 785



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/256 (20%), Positives = 97/256 (37%), Gaps = 57/256 (22%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  + M+++  G   +   YNTLI+G    G T  A+ + + M       GV   PN  
Sbjct: 563 EAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMT------GVASMPNHF 616

Query: 62  T---------------------------------------------------YTTIIDGL 70
           T                                                   Y  I++G 
Sbjct: 617 TFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGF 676

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            +E  +D+   L   MK++++  N   Y SL++ FC    + +A  L   M+  G  PN+
Sbjct: 677 SEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNL 736

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           +S+  +++     G+ D A  +   +       +  V+  ++DG    G  +   ++   
Sbjct: 737 ISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISI 796

Query: 191 MESMGCKHNVFSYSIL 206
           +E M CK +  +Y++L
Sbjct: 797 LEQMKCKPSDETYAML 812


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/369 (32%), Positives = 190/369 (51%), Gaps = 15/369 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPN 59
           A +L  ++ V G + N  T + ++ GLCR G    AL  F+   E+A+         +P+
Sbjct: 44  AFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHA--------QPD 95

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            V+YTT+I+GLCK G VD A +LF KM       PN  TYN+L+ G C  +  + A+ + 
Sbjct: 96  VVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVI 155

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            E   +   P+VV++N +M  L + G++DEA      M + G  P    +N ++ G C  
Sbjct: 156 TEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRA 215

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            R+  A E+F  M       N+ +YS++I+G CK+ +++ A  L   M+S+G +PD+V Y
Sbjct: 216 RRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAY 275

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L +G     +++ A  L   M   G   D   Y   ID LCK G + +A E+FR L  
Sbjct: 276 TPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVA 335

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            K   ++  Y+ LI G C++ R+    ++ R +       +VVTYN MI  L    + ++
Sbjct: 336 NKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEE 392

Query: 359 ARDLFLDME 367
           A  +F +M 
Sbjct: 393 AYGMFREMS 401



 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 177/335 (52%), Gaps = 8/335 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V +Y TLINGLC+ G    A +LF +M    G     C+PN  TY  ++DGLCK+  
Sbjct: 93  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG-----CRPNAFTYNALVDGLCKQDR 147

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A+ +  + +  +  P+VVTYN+L+         +EA   F +M ++G  P +VSFN 
Sbjct: 148 LDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 207

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I+  LC+  ++ +A  +   MI     PN   Y+ ++DG C + +++ A++L   M S G
Sbjct: 208 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 267

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+ ++ +Y+ L+ G+     ++ AL L   M+S+G  PDVV Y  +   L ++ +V+ A 
Sbjct: 268 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 327

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++F E+  +  + +   Y   I G C+   + E  ++ R    +    ++  YN +I GL
Sbjct: 328 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE---MACRPNVVTYNTMIWGL 384

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
               R + A+ +FR +     + D  TY  +  AL
Sbjct: 385 SMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 419



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 173/351 (49%), Gaps = 8/351 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           TYN LI G C       A +L  EM       G+ C  N  T + I+ GLC+ G V +A 
Sbjct: 27  TYNVLIRGFCNASDLDAAFSLLREM----DVEGMQC--NDRTTSIILQGLCRCGRVAQAL 80

Query: 81  ELF-LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMN 138
           E F   ++  +  P+VV+Y +LI+G C     + A  LF +M+  G  +PN  ++N +++
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVD 140

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LCK  ++D A  ++    +    P+   YNTLM      GRV+ A   F  M   G   
Sbjct: 141 GLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
            + S++ +I G C+ + +  AL +++EM+ +   P++V Y+ +  GL +  Q++ A +L 
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           D M   G   D  AY   + G    G +  A+ L R +       D+  Y  +ID LCK 
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GR+  A E+FR L       +VVTY+ +I   C   ++D+   +  +M  +
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMACR 371



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 170/336 (50%), Gaps = 38/336 (11%)

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           + + G  ++A +LF +     +  + VTYN LI GFC A+D + A  L  EM  +G+Q N
Sbjct: 1   MVRAGSHNQALQLF-RENPCQLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCN 59

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAEELF 188
             + ++I+  LC+ G++ +A    +  +++   +P+   Y TL++G C  GRV+ A +LF
Sbjct: 60  DRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLF 119

Query: 189 VSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
             M  + GC+ N F+Y+ L++G CK   ++ A ++ +E   +   PDVV YNTL   LF+
Sbjct: 120 RKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQ 179

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           + +V+ A   F +M   G      ++   I GLC+   + +A+E+F  +    +  ++  
Sbjct: 180 LGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVT 239

Query: 308 YNCLIDGLCKS-----------------------------------GRLKIAWELFRSLP 332
           Y+ +IDGLCKS                                   GRL  A  L R + 
Sbjct: 240 YSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
               I DVVTY ++I  LC  G++D A ++F ++ A
Sbjct: 300 SQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVA 335



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 144/272 (52%), Gaps = 9/272 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A+  + R     P+V TYNTL+  L + G    AL  F +M     E G V  P  V+
Sbjct: 151 ARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT----EEGYV--PTLVS 204

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  II GLC+   +  A E+F +M D + +PN+VTY+ +I G C ++  +EA+ L   M+
Sbjct: 205 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P++V++  ++      G++D A  LL  M+  G  P+   Y  ++D  C  GRV+
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 324

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A E+F  + +  C  NV +YS LI GYC+   ++    +  EM     +P+VV YNT+ 
Sbjct: 325 DAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMI 381

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            GL  + + E A+ +F EM   G   D   YR
Sbjct: 382 WGLSMVDRNEEAYGMFREMSECGFVPDARTYR 413



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 129/249 (51%), Gaps = 9/249 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A F ++   G  P + ++N +I GLCR      AL +F EM + +        PN V
Sbjct: 185 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH------PNLV 238

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDGLCK   +D+A++L  +M  E   P++V Y  L+ GF  A   + A  L   M
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P+VV++ V++++LCK G++D+A  +   ++     PN   Y+ L+ G+C   RV
Sbjct: 299 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +   ++   M  M C+ NV +Y+ +I G       E A  ++ EM   G  PD   Y  L
Sbjct: 359 DEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415

Query: 242 FIGLFEIHQ 250
              L  I Q
Sbjct: 416 KRALRMIDQ 424


>gi|42562903|ref|NP_176512.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|114050643|gb|ABI49471.1| At1g63230 [Arabidopsis thaliana]
 gi|332195952|gb|AEE34073.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 323

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 168/297 (56%), Gaps = 10/297 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A AL  ++   G +P    Y T+INGLC+ G T  ALNL  +M   +       K + 
Sbjct: 27  LQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKMEETH------IKAHV 76

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  IID LCK+G    A+ LF +M D+ I P+V+TY+ +I  FC +  W +A+ L  +
Sbjct: 77  VIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRD 136

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + P+VV+F+ ++N L K GK+ EA  +   M++ G+ P    YN+++DGFC   R
Sbjct: 137 MIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDR 196

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A+ +  SM S  C  +V ++S LINGYCK K ++  + ++ EM  +GI  + V Y T
Sbjct: 197 LNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           L  G  ++  ++ A  L + M   GVA +   +++ +  LC    + +A  +   L+
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313



 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/312 (29%), Positives = 158/312 (50%), Gaps = 4/312 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+P+ VT+TT+++GLC EG V +A  L  +M +E   P    Y ++I+G C   D   A 
Sbjct: 6   CRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESAL 61

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  +M +  ++ +VV +N I++ LCK+G    A  L   M   G+ P+   Y+ ++D F
Sbjct: 62  NLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSF 121

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C +GR   AE+L   M       +V ++S LIN   K  ++  A  +Y +ML +GI P  
Sbjct: 122 CRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTT 181

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + YN++  G  +  ++  A ++ D M     + D   + T I+G CK   +   +E+F  
Sbjct: 182 ITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 241

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +       +   Y  LI G C+ G L  A +L   +    +  + +T+  M+ +LC+  +
Sbjct: 242 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKE 301

Query: 356 MDKARDLFLDME 367
           + KA  +  D++
Sbjct: 302 LRKAFAILEDLQ 313



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 149/261 (57%), Gaps = 6/261 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  K+     + +V  YN +I+ LC+ GH I A NLF EM +  G F     P+ +T
Sbjct: 60  ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHD-KGIF-----PDVIT 113

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +ID  C+ G    A++L   M +  INP+VVT+++LI+        +EA+ ++ +M+
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P  +++N +++  CK  ++++A R+L+ M      P+   ++TL++G+C   RV+
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              E+F  M   G   N  +Y+ LI+G+C+  +++ A  L + M+S G+ P+ + + ++ 
Sbjct: 234 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293

Query: 243 IGLFEIHQVERAFKLFDEMQR 263
             L    ++ +AF + +++Q+
Sbjct: 294 ASLCSKKELRKAFAILEDLQK 314



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 144/278 (51%), Gaps = 4/278 (1%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M +    P+VVT+ +L++G C      +A  L   M+++G QP    +  I+N LCK G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            + A  LL  M +  ++ +  +YN ++D  C  G    A+ LF  M   G   +V +YS 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+ +C++     A  L  +M+ + I PDVV ++ L   L +  +V  A +++ +M R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +   T  Y + IDG CK   + +A  +  ++       D+  ++ LI+G CK+ R+    
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           E+F  + R  ++A+ VTY  +IH  C  G +D A+DL 
Sbjct: 237 EIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 127/250 (50%), Gaps = 6/250 (2%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G +P+VV+F  +MN LC  G++ +A  L++ M++ G +P    Y T+++G C  G 
Sbjct: 1   MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  L   ME    K +V  Y+ +I+  CK+     A +L++EM  KGI PDV+ Y+ 
Sbjct: 57  TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRIL 299
           +        +   A +L  +M    +  D   +   I+ L K G + EA E++   LR  
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +   I  YN +IDG CK  RL  A  +  S+       DVVT++ +I+  C   ++D  
Sbjct: 177 IFPTTI-TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235

Query: 360 RDLFLDMEAK 369
            ++F +M  +
Sbjct: 236 MEIFCEMHRR 245


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF ++   G  PN  TY TLI+ L + G     L+L  EM +     GVV   + V
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLV 345

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D L K+G  D+ K+       +N++PN VTY  LI   C A++ +EA+ + +EM
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNVV+F+ ++N   K G +D+A+    +M + G+ PN   Y TL+DGF      
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E++  M   G K N F    L+NG  +N +IE A++L+ +    G+  D V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+   +  AFK   E+    +  D   Y  FI+ LC  G   EA      +R +  
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   YN +I   C+ G    A +L   +    +  +++TYN ++  L   G ++KA+ 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 362 LFLDM 366
           L  +M
Sbjct: 646 LLNEM 650



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 177/354 (50%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV TY   I   CRT     A +L+E M       GV+   + VT + ++ GLC++
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRD 287

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  LF +M      PN VTY +LI     A    E   L  EM+ +GV  ++V++
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M+ L K GK DE    L   +   + PN   Y  L+D  C    V+ AE++ + ME 
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                NV ++S +ING+ K   ++ A      M  +GI P+VV Y TL  G F+    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +++ +M   GV  + +   + ++GL +NG I EA+ LF+        LD   Y  LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GL K+G +  A++  + L    ++ D V YN+ I+ LC  GK  +A+    +M 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 163/331 (49%), Gaps = 6/331 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   YN  IN LC  G    A +   EM N      +  KP+  TY T+I   C++G  
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRN------MGLKPDQSTYNTMIVSHCRKGET 605

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA +L  +MK  +I PN++TYN+L+ G        +AK L  EM+  G  P+ ++   +
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    ++ ++D    + E M+  G+  +  VYNTL+   C  G   +A  +   M   G 
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +++ LI G+CK+  ++ A + Y++ML + I P++  +NTL  GL  + ++  A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM++ G+  +   Y     G  K    VEA+ L+  +    +   +  YN LI    
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           K+G +  A ELF+ + +  +     TY+I++
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 182/391 (46%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N F  ++L+NGL + G    A+ LF++ A+G+G        + V YTT+IDGL K 
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKD-ASGSG-----LSLDHVNYTTLIDGLFKA 532

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A +   ++ D N+ P+ V YN  I+  C    + EAK    EM + G++P+  ++
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++   C+ G+  +A +LL  M    ++PN   YNTL+ G   TG V +A+ L   M S
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  ++  ++    +++ ++  L ++  M++ G+  D+ +YNTL   L       +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + +EM   G+A DT  +   I G CK+ ++  A   +  +       +I  +N L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 314 GLCKSGRLKIAWELFRSLPRGVL-----------------------------------IA 338
           GL   GR+  A  +   + +  L                                   + 
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            V TYN +I      G M +A++LF DM+ +
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKR 863



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 161/366 (43%), Gaps = 46/366 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +   ++R  G +P+  TYNT+I   CR G T  AL L  EM   +       KPN +
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS------IKPNLI 625

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT------------------------ 97
           TY T++ GL   G V+KAK L  +M     +P+ +T                        
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 98  -----------YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                      YN+L+   CY     +A  +  EM+  G+ P+ ++FN ++   CK+  +
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHL 745

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A      M+   + PN   +NTL+ G    GR+  A  + + ME  G + N  +Y IL
Sbjct: 746 DNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDIL 805

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
             G+ K      A+ LY EM+ KG  P V  YN L     +   + +A +LF +MQ+ GV
Sbjct: 806 ATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS-GRLKIAW 325
              +  Y   + G  +   I    E+ + L+ +K E         +  +C++  +  + W
Sbjct: 866 HPTSCTYDILVSGWSR---IRNGTEVKKCLKDMK-EKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 326 ELFRSL 331
           +  R L
Sbjct: 922 QAQRLL 927



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 170/365 (46%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  + +++      PNV T++++ING  + G     L+   E      E G+   PN V
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRG----LLDKATEYKRMMKERGI--NPNVV 450

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG  K    D A E++  M  E +  N    +SL++G        EA  LF + 
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDA 510

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  + V++  +++ L K G M  A +  + ++   + P+A VYN  ++  C+ G+ 
Sbjct: 511 SGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKF 570

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+     M +MG K +  +Y+ +I  +C+  E   AL L  EM    IKP+++ YNTL
Sbjct: 571 KEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTL 630

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF    VE+A  L +EM   G +  +  +R  +    ++  +   +++   +     
Sbjct: 631 VAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN L+  LC  G  + A  +   +    +  D +T+N +I   C    +D A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 362 LFLDM 366
            +  M
Sbjct: 751 TYAQM 755



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/311 (30%), Positives = 134/311 (43%), Gaps = 37/311 (11%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK------- 145
           P  V YN L+      +D   A  +  EM  +GV  + V+ N ++  LC+NG+       
Sbjct: 101 PTTVAYNILLAAL---SDHAHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAAL 157

Query: 146 ----------MDEASRLLELMIQ-IGVRPNAFV----------------YNTLMDGFCLT 178
                     M  A  L  L I   G  P A                  YNTL+ GFC  
Sbjct: 158 ADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRA 217

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+V+ A  +   M+  G   NV +Y+  I  YC+ K +E A  LY  M+  G+  DVV  
Sbjct: 218 GQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTL 277

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           + L  GL    +   A+ LF EM + G A +   Y T ID L K G   E + L   +  
Sbjct: 278 SALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS 337

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
               +D+  Y  L+D L K G+     +  R      L  + VTY ++I ALC    +D+
Sbjct: 338 RGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDE 397

Query: 359 ARDLFLDMEAK 369
           A  + L+ME K
Sbjct: 398 AEQVLLEMEEK 408



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 41/330 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++++   +PN+ TYNTL+ GL  TG    A  L  EM +          P+++
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG------FSPSSL 660

Query: 62  T-----------------------------------YTTIIDGLCKEGFVDKAKELFLKM 86
           T                                   Y T++  LC  G   KA  +  +M
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
               I P+ +T+N+LI G C ++  + A   + +M+ Q + PN+ +FN ++  L   G++
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA  +L  M + G+ PN   Y+ L  G         A  L+  M   G    V +Y+ L
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+ + K   +  A  L+ +M  +G+ P    Y+ L  G   I       K   +M+  G 
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGF 900

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +              K G   +A  L + L
Sbjct: 901 SPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 6/158 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  + +++   G EPN  TY+ L  G  +  + + A+ L+ EM  G G       P   
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV-GKGFV-----PKVS 835

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I    K G + +AKELF  M+   ++P   TY+ L+ G+    +  E K    +M
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDM 895

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            ++G  P+  + + I     K G   +A RLL+ + ++
Sbjct: 896 KEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 909

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 199/435 (45%), Gaps = 76/435 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  KL   G  PNVF YN LI+ LC+      A  LF+EMA G G      +PN V
Sbjct: 344 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEV 397

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  LCK G ++ A  LF KM+D+ I   V  YNSLI+G+C     + A+ L   M
Sbjct: 398 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 457

Query: 122 MDQGVQPNVVSFNVIMNELCKNG-----------------------------------KM 146
           + +G+ P   S++ ++  LC+NG                                   KM
Sbjct: 458 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 517

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA+RL + MI   V PN   +N +++G+CL G + +A +L+  M  MG K + ++Y  L
Sbjct: 518 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 577

Query: 207 INGYCKNKEIEGA-----------------------------------LSLYSEMLSKGI 231
           I+G C    +  A                                     L+ EM  +G+
Sbjct: 578 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 637

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           K D+V +  +     + H  E++  LF EM+  GV  D   Y   ID L K   +++A+ 
Sbjct: 638 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 697

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            +  + +  Y  +   +  LI+ LCKSG L  A  L + +  G ++ +  TYN  +    
Sbjct: 698 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 757

Query: 352 ADGKMDKARDLFLDM 366
            +G M+KA+DL   M
Sbjct: 758 TEGDMEKAKDLHSAM 772



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 186/386 (48%), Gaps = 31/386 (8%)

Query: 14  GCEPNVFTYNTLINGLCR---------TGHTIVALNLFEEMANGN-------------GE 51
           G   +  TY TL+ G CR           H ++ L      AN +               
Sbjct: 286 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 345

Query: 52  FGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           F + CK       PN   Y  +ID LCK    D A  LF +M    + PN VTY  LIH 
Sbjct: 346 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 405

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C      +A CLF +M D+G++  V  +N ++N  CK G +D A  LL  M++ G+ P 
Sbjct: 406 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 465

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           A  Y+ L+ G C  G ++   EL   M   G   N ++++ LING+CK+K+++ A  L+ 
Sbjct: 466 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 525

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M+   + P+ V +N +  G   +  + +AF+L+D+M   G+  D + YR+ I GLC   
Sbjct: 526 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 585

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP-RGVLIADVVTY 343
            + +A E    L      L+  +   L+ G  + GR    + L+  +  RGV + D+V++
Sbjct: 586 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL-DLVSF 644

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
            I+++A       +K+  LF +M+ +
Sbjct: 645 TIIVYAALKQHDKEKSCVLFREMKEQ 670



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 177/364 (48%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K+   G   + + Y   I   C + +   A  L   M +     GV  K + V 
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE----GV--KASAVP 258

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++ GLCK   V +A E+   M +  +  + VTY +L++GFC   +   A  +  +M+
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 318

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+  + + +++EL K   ++EA  L   +  +G+ PN F YN L+D  C   R +
Sbjct: 319 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 378

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ LF  M   G + N  +Y+ILI+  CK   IE AL L+ +M  KGIK  V  YN+L 
Sbjct: 379 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 438

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +   ++RA  L   M + G+     +Y   I GLC+NG +   +EL R +      
Sbjct: 439 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 498

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   +  LI+G CK  ++  A  LF  +    +I + VT+N+MI   C  G + KA  L
Sbjct: 499 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 558

Query: 363 FLDM 366
           +  M
Sbjct: 559 YDQM 562



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA LF K+      PN  T+N +I G C  G+   A  L+++M     E G+  KP+  
Sbjct: 519 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV----EMGL--KPDNY 572

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLC    V KA E    +++     N  +  +L++GF     + E   L+ EM
Sbjct: 573 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 632

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++VSF +I+    K    +++  L   M + GV+P+   Y  ++D       +
Sbjct: 633 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 692

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A   +  M   G   N  ++++LIN  CK+  +  A  L  EML+  + P+   YN  
Sbjct: 693 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 752

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                    +E+A  L   M + G  A   ++   I GLCK G I EA++L   +    +
Sbjct: 753 LDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGF 811

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +Y+ +I  LCK G +  A+EL+  +    L  DVV YNI I      G+ DKA  
Sbjct: 812 SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALG 871

Query: 362 LFLDM 366
           ++ +M
Sbjct: 872 IYTNM 876



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 162/343 (47%), Gaps = 35/343 (10%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  T + I+  L K      A++LF KM    ++ +   Y + I  +C + + + A+ L 
Sbjct: 185 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 244

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-- 176
           + M  +GV+ + V +NV+M  LCKN ++ EA  +  +M+ IGV  +   Y TL+ GFC  
Sbjct: 245 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 304

Query: 177 ----LTGRVN----------------------RAEELFVSMESMGCK-------HNVFSY 203
               +  R+                       R +EL     S+ CK        NVF+Y
Sbjct: 305 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+  CKN+  + A  L+ EM  +G++P+ V Y  L   L +   +E A  LFD+M+ 
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+    + Y + I+G CK G +  A  L   +          +Y+ LI GLC++G L  
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 484

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             EL R +    +  +  T+  +I+  C D KMD+A  LF  M
Sbjct: 485 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 527



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 7/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  LF +++  G +P+   Y  +I+ L +  + I ALN +++M            PNTV
Sbjct: 659 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG------YSPNTV 712

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +I+ LCK G++  A+ L  +M   N+ PN  TYN  +  F    D  +AK L   M
Sbjct: 713 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 772

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   ++VSFN+++  LCK GK+ EA  L+  + + G  P+   Y+T++   C  G +
Sbjct: 773 L-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 831

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A EL+  M   G K +V +Y+I I     + E + AL +Y+ M+  G++P+   Y  L
Sbjct: 832 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891

Query: 242 FIGL 245
             G+
Sbjct: 892 LSGI 895



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 153/298 (51%), Gaps = 7/298 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N F+   L+ G  R G      +L++EMA      GV  K + V++T I+    K+   +
Sbjct: 605 NNFSLTALLYGFFREGRFTETYHLWDEMA----VRGV--KLDLVSFTIIVYAALKQHDKE 658

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K+  LF +MK++ + P+ + Y  +I       +  +A   + +M+  G  PN V+  V++
Sbjct: 659 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 718

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK+G +  A  L + M+   V PN F YN  +D F   G + +A++L  +M   G  
Sbjct: 719 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHL 777

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ S++ILI G CK  +I+ A+ L S++   G  PD + Y+T+   L ++  + +AF+L
Sbjct: 778 ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 837

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++EM   G+  D  AY  FI     +G   +A+ ++  +     + +   Y  L+ G+
Sbjct: 838 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 895



 Score =  117 bits (293), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 123/248 (49%)

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+  N  + + I+  L K  +   A  L + M+Q GV  + +VY   +  +C +  +
Sbjct: 178 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 237

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+  D V Y TL
Sbjct: 238 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 297

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 298 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 357

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ AYN LID LCK+ R   A  LF+ +    L  + VTY I+IHALC  G ++ A  
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 417

Query: 362 LFLDMEAK 369
           LF  M  K
Sbjct: 418 LFDKMRDK 425



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 129/276 (46%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I  N  T + ++        +  A+ LF +M+  GV  +   +   +   C++  +D A 
Sbjct: 182 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 241

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L+  M   GV+ +A  YN LM G C   RV  A E+   M ++G   +  +Y  L+ G+
Sbjct: 242 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 301

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+ +E+E AL +  +M+  G  P     + +   L +   VE AF L  ++   G+  + 
Sbjct: 302 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 361

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           +AY   ID LCKN    +A  LF+ +     E +   Y  LI  LCK G ++ A  LF  
Sbjct: 362 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 421

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +   V  YN +I+  C  G +D+AR L   M
Sbjct: 422 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 457


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 176/353 (49%), Gaps = 9/353 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ +TY  +I GLC  G    AL+L ++M +        C+P+ VTYT +++ +CK    
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG------CQPSVVTYTVLLEAVCKSTGF 196

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A E+  +M+ +   PN+VTYN +I+G C     ++A+     +   G QP+ VS+  +
Sbjct: 197 GQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTV 256

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC   + ++   L   M++    PN   ++ L+  FC  G V RA ++   M   GC
Sbjct: 257 LKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGC 316

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N    +I+IN  CK   ++ A    + M S G  PD + Y T+  GL    + E A +
Sbjct: 317 AANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKE 376

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  EM R     +   + TFI  LC+ G I +A  L   +     E++I  YN L++G C
Sbjct: 377 LLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFC 436

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             GR+  A ELF S+P      + +TY  ++  LC   ++D A +L  +M  K
Sbjct: 437 VQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQK 486



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 181/364 (49%), Gaps = 9/364 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++   GC  N    N +IN +C+ G    A      M    G +G  C P+T++
Sbjct: 304 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM----GSYG--CSPDTIS 357

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++ GLC+    + AKEL  +M  +N  PN VT+N+ I   C      +A  L  +M 
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G + N+V++N ++N  C  G++D A   LEL   +  +PN   Y TL+ G C   R++
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSA---LELFYSMPCKPNTITYTTLLTGLCNAERLD 474

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M    C  NV ++++L++ +C+   ++ A+ L  +M+  G  P+++ YNTL 
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+ +    E A +L   +  +GV+ D   Y + I  L +   + EA+++F  ++ L   
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                YN ++  LCK      A + F  +     + + +TY  +I  L  +  + + RDL
Sbjct: 595 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 654

Query: 363 FLDM 366
             ++
Sbjct: 655 LREL 658



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 173/365 (47%), Gaps = 9/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  +    G  P+V+    LI  LCR G T  A  +            V       
Sbjct: 61  EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVF------ 114

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ G C+ G +D A+ L   M    + P+  TY  +I G C      EA  L  +M
Sbjct: 115 AYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDM 171

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G QP+VV++ V++  +CK+    +A  +L+ M   G  PN   YN +++G C  GRV
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRV 231

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E    + S G + +  SY+ ++ G C  K  E    L++EM+ K   P+ V ++ L
Sbjct: 232 DDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                    VERA ++ ++M  HG AA+T      I+ +CK G + +A +    +     
Sbjct: 292 VRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGC 351

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +Y  ++ GLC++ R + A EL + + R     + VT+N  I  LC  G +++A  
Sbjct: 352 SPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATM 411

Query: 362 LFLDM 366
           L   M
Sbjct: 412 LIEQM 416



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 9/295 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++    C PN  T+NT I  LC+ G    A  L E+M+    E G  C+ N V
Sbjct: 373 DAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS----EHG--CEVNIV 426

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++G C +G VD A ELF  M      PN +TY +L+ G C A   + A  L  EM
Sbjct: 427 TYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEM 483

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PNVV+FNV+++  C+ G MDEA  L+E M++ G  PN   YNTL+DG       
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 543

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   + S G   ++ +YS +I    +   +E A+ ++  +   G++P  VIYN +
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + L +    + A   F  M  +G   +   Y T I+GL    ++ E  +L R L
Sbjct: 604 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLREL 658



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 140/265 (52%), Gaps = 9/265 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GCE N+ TYN L+NG C  G    AL LF         + + CKPNT+
Sbjct: 408 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF---------YSMPCKPNTI 458

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ GLC    +D A EL  +M  ++  PNVVT+N L+  FC     +EA  L  +M
Sbjct: 459 TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQM 518

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN++++N +++ + K+   +EA  LL  ++  GV P+   Y++++       RV
Sbjct: 519 MEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRV 578

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  ++ +G +     Y+ ++   CK    +GA+  ++ M+S G  P+ + Y TL
Sbjct: 579 EEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITL 638

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
             GL     ++    L  E+   GV
Sbjct: 639 IEGLANEDFLKETRDLLRELCSRGV 663



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 133/275 (48%), Gaps = 5/275 (1%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +PN    N+ +      +D  EA  L      +G  P+V     ++  LC+ G+  +A+R
Sbjct: 42  SPNPA--NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAAR 99

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +L    + G   + F YNTL+ G+C  G+++ A  L  SM       + ++Y+ +I G C
Sbjct: 100 VLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLC 156

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
               +  ALSL  +ML +G +P VV Y  L   + +     +A ++ DEM+  G   +  
Sbjct: 157 DRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIV 216

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   I+G+C+ G + +A E    L    ++ D  +Y  ++ GLC + R +   ELF  +
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                + + VT+++++   C  G +++A  +   M
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 3/236 (1%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  +  L     + EA+RL++     G  P+ ++   L+   C  GR + A  +  + E 
Sbjct: 47  NARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAER 106

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +VF+Y+ L+ GYC+  +++ A  L + M    + PD   Y  +  GL +  +V  
Sbjct: 107 SGTAVDVFAYNTLVAGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGE 163

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L D+M   G       Y   ++ +CK+    +A+E+   +R      +I  YN +I+
Sbjct: 164 ALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIIN 223

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G+C+ GR+  A E    L       D V+Y  ++  LCA  + +   +LF +M  K
Sbjct: 224 GMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEK 279


>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
          Length = 1003

 Score =  197 bits (502), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 199/435 (45%), Gaps = 76/435 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  KL   G  PNVF YN LI+ LC+      A  LF+EMA G G      +PN V
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEV 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  LCK G ++ A  LF KM+D+ I   V  YNSLI+G+C     + A+ L   M
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNG-----------------------------------KM 146
           + +G+ P   S++ ++  LC+NG                                   KM
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA+RL + MI   V PN   +N +++G+CL G + +A +L+  M  MG K + ++Y  L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554

Query: 207 INGYCKNKEIEGA-----------------------------------LSLYSEMLSKGI 231
           I+G C    +  A                                     L+ EM  +G+
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           K D+V +  +     + H  E++  LF EM+  GV  D   Y   ID L K   +++A+ 
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            +  + +  Y  +   +  LI+ LCKSG L  A  L + +  G ++ +  TYN  +    
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 352 ADGKMDKARDLFLDM 366
            +G M+KA+DL   M
Sbjct: 735 TEGDMEKAKDLHSAM 749



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 186/386 (48%), Gaps = 31/386 (8%)

Query: 14  GCEPNVFTYNTLINGLCR---------TGHTIVALNLFEEMANGN-------------GE 51
           G   +  TY TL+ G CR           H ++ L      AN +               
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 52  FGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           F + CK       PN   Y  +ID LCK    D A  LF +M    + PN VTY  LIH 
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C      +A CLF +M D+G++  V  +N ++N  CK G +D A  LL  M++ G+ P 
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           A  Y+ L+ G C  G ++   EL   M   G   N ++++ LING+CK+K+++ A  L+ 
Sbjct: 443 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M+   + P+ V +N +  G   +  + +AF+L+D+M   G+  D + YR+ I GLC   
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP-RGVLIADVVTY 343
            + +A E    L      L+  +   L+ G  + GR    + L+  +  RGV + D+V++
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL-DLVSF 621

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
            I+++A       +K+  LF +M+ +
Sbjct: 622 TIIVYAALKQHDKEKSCVLFREMKEQ 647



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 177/364 (48%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K+   G   + + Y   I   C + +   A  L   M +     GV  K + V 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESE----GV--KASAVP 235

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++ GLCK   V +A E+   M +  +  + VTY +L++GFC   +   A  +  +M+
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+  + + +++EL K   ++EA  L   +  +G+ PN F YN L+D  C   R +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ LF  M   G + N  +Y+ILI+  CK   IE AL L+ +M  KGIK  V  YN+L 
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +   ++RA  L   M + G+     +Y   I GLC+NG +   +EL R +      
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   +  LI+G CK  ++  A  LF  +    +I + VT+N+MI   C  G + KA  L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 363 FLDM 366
           +  M
Sbjct: 536 YDQM 539



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA LF K+      PN  T+N +I G C  G+   A  L+++M     E G+  KP+  
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV----EMGL--KPDNY 549

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLC    V KA E    +++     N  +  +L++GF     + E   L+ EM
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++VSF +I+    K    +++  L   M + GV+P+   Y  ++D       +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A   +  M   G   N  ++++LIN  CK+  +  A  L  EML+  + P+   YN  
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                    +E+A  L   M + G  A   ++   I GLCK G I EA++L   +    +
Sbjct: 730 LDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGF 788

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +Y+ +I  LCK G +  A+EL+  +    L  DVV YNI I      G+ DKA  
Sbjct: 789 SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALG 848

Query: 362 LFLDM 366
           ++ +M
Sbjct: 849 IYTNM 853



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 162/343 (47%), Gaps = 35/343 (10%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  T + I+  L K      A++LF KM    ++ +   Y + I  +C + + + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-- 176
           + M  +GV+ + V +NV+M  LCKN ++ EA  +  +M+ IGV  +   Y TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 177 ----LTGRVN----------------------RAEELFVSMESMGCK-------HNVFSY 203
               +  R+                       R +EL     S+ CK        NVF+Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+  CKN+  + A  L+ EM  +G++P+ V Y  L   L +   +E A  LFD+M+ 
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+    + Y + I+G CK G +  A  L   +          +Y+ LI GLC++G L  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             EL R +    +  +  T+  +I+  C D KMD+A  LF  M
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 7/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  LF +++  G +P+   Y  +I+ L +  + I ALN +++M            PNTV
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG------YSPNTV 689

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +I+ LCK G++  A+ L  +M   N+ PN  TYN  +  F    D  +AK L   M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   ++VSFN+++  LCK GK+ EA  L+  + + G  P+   Y+T++   C  G +
Sbjct: 750 L-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A EL+  M   G K +V +Y+I I     + E + AL +Y+ M+  G++P+   Y  L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 242 FIGL 245
             G+
Sbjct: 869 LSGI 872



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 153/298 (51%), Gaps = 7/298 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N F+   L+ G  R G      +L++EMA      GV  K + V++T I+    K+   +
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVR----GV--KLDLVSFTIIVYAALKQHDKE 635

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K+  LF +MK++ + P+ + Y  +I       +  +A   + +M+  G  PN V+  V++
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK+G +  A  L + M+   V PN F YN  +D F   G + +A++L  +M   G  
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHL 754

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ S++ILI G CK  +I+ A+ L S++   G  PD + Y+T+   L ++  + +AF+L
Sbjct: 755 ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++EM   G+  D  AY  FI     +G   +A+ ++  +     + +   Y  L+ G+
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 123/248 (49%)

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+  N  + + I+  L K  +   A  L + M+Q GV  + +VY   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+  D V Y TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ AYN LID LCK+ R   A  LF+ +    L  + VTY I+IHALC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 362 LFLDMEAK 369
           LF  M  K
Sbjct: 395 LFDKMRDK 402



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 129/276 (46%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I  N  T + ++        +  A+ LF +M+  GV  +   +   +   C++  +D A 
Sbjct: 159 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 218

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L+  M   GV+ +A  YN LM G C   RV  A E+   M ++G   +  +Y  L+ G+
Sbjct: 219 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 278

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+ +E+E AL +  +M+  G  P     + +   L +   VE AF L  ++   G+  + 
Sbjct: 279 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           +AY   ID LCKN    +A  LF+ +     E +   Y  LI  LCK G ++ A  LF  
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +   V  YN +I+  C  G +D+AR L   M
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 7/209 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A   + ++ V G  PN  T+  LIN LC++G+   A  L +EM  GN        PN 
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGN------VLPNK 723

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY   +D    EG ++KAK+L   M   ++  ++V++N LI G C A    EA  L  +
Sbjct: 724 FTYNCFLDYFATEGDMEKAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSK 782

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + + G  P+ +S++ I++ELCK G +++A  L   M+  G++P+   YN  +    + G 
Sbjct: 783 ITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGE 842

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILING 209
            ++A  ++ +M   G + N  +Y  L++G
Sbjct: 843 SDKALGIYTNMIRSGVQPNWDTYRALLSG 871


>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score =  197 bits (502), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 103/283 (36%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+ +V  +NTL+NGLCR G  + A  L + M   NG      +PN VTY TI++G+CK 
Sbjct: 5   GCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVE-NGH-----QPNEVTYGTIVNGMCKM 58

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  D A  L  KM + +I  +VV Y ++I   C     ++A+ LF EM D+G+ PNV+++
Sbjct: 59  GDTDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTY 118

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C  GK  +A +LL  MI+  V P+   +N L++ F   G+++ AEEL+  M  
Sbjct: 119 NCMIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLG 178

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +  +Y+ LI+G+CK+  ++ A  ++  M+SKG  P+V+  NTL  G     +V+ 
Sbjct: 179 RNIFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDD 238

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
             KL  EM R G+  D+ +Y T I G C+ G +  A +LF+ +
Sbjct: 239 GIKLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 145/281 (51%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M ++    +VV +N+L++G C      EA+ L   M++ G QPN V++  I+N +CK G 
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            D A  LL  M +  ++ +  +Y  ++D  C  G  ++A+ LF  M   G   NV +Y+ 
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G C   +   A  L  +M+   + PDVV +N L     +  ++  A +L+ EM    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  DT  Y + IDG CK+  + +A  +F  +       ++   N LI G C++ R+    
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGI 240

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +L   + R  L+ D V+YN +IH  C  G ++ A+DLF +M
Sbjct: 241 KLLHEMLRRGLVPDSVSYNTLIHGFCQAGDLNAAQDLFQEM 281



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 137/258 (53%), Gaps = 29/258 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----- 55
           +EA AL  ++   G +PN  TY T++NG+C+ G T  ALNL  +M   + +  VV     
Sbjct: 27  LEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDESHIKADVVIYTAI 86

Query: 56  ----CK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
               CK                    PN +TY  +IDG C  G    A++L   M + N+
Sbjct: 87  IDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWTDAEQLLRDMIESNV 146

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +P+VVT+N+LI+ F      +EA+ L+ EM+ + + P+ +++N +++  CK+ ++D+A  
Sbjct: 147 DPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLIDGFCKHSRLDDAKH 206

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           + +LM+  G  PN    NTL+ G C   RV+   +L   M   G   +  SY+ LI+G+C
Sbjct: 207 IFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLVPDSVSYNTLIHGFC 266

Query: 212 KNKEIEGALSLYSEMLSK 229
           +  ++  A  L+ EM+S+
Sbjct: 267 QAGDLNAAQDLFQEMISQ 284



 Score =  124 bits (311), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 108/214 (50%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M++ G + +   +NTLM+G C  GRV  AE L   M   G + N  +Y  ++NG CK  +
Sbjct: 1   MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
            + AL+L  +M    IK DVVIY  +   L +     +A  LF EM   G+  +   Y  
Sbjct: 61  TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDG C  G   +A +L R +     + D+  +N LI+   K G++  A EL+R +    
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRN 180

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  D +TYN +I   C   ++D A+ +F  M +K
Sbjct: 181 IFPDTITYNSLIDGFCKHSRLDDAKHIFDLMVSK 214


>gi|15226343|ref|NP_178283.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216739|sp|Q9ZUA2.1|PP141_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g01740
 gi|4220475|gb|AAD12698.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250397|gb|AEC05491.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/378 (31%), Positives = 184/378 (48%), Gaps = 36/378 (9%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG---------------------- 50
           FGCEP+V +YN+LI+G CR G    A  + E +   +G                      
Sbjct: 85  FGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKM 144

Query: 51  ------EFGVV---CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
                   GV+   C PN VTY+T ID  CK G +  A + F  MK + ++PNVVT+  L
Sbjct: 145 LDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           I G+C A D   A  L+ EM    +  NVV++  +++  CK G+M  A  +   M++  V
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            PN+ VY T++DGF   G  + A +    M + G + ++ +Y ++I+G C N +++ A  
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE 324

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           +  +M    + PD+VI+ T+    F+  +++ A  ++ ++   G   D  A  T IDG+ 
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           KNG + EA+  F     ++   D+  Y  LID LCK G       LF  +    L+ D  
Sbjct: 385 KNGQLHEAIVYF----CIEKANDV-MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF 439

Query: 342 TYNIMIHALCADGKMDKA 359
            Y   I  LC  G +  A
Sbjct: 440 MYTSWIAGLCKQGNLVDA 457



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 182/349 (52%), Gaps = 10/349 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  ++N++++ +C+ G    A    E++ +    FG  C+P+ ++Y ++IDG C+ 
Sbjct: 51  GYTPHRSSFNSVVSFVCKLGQVKFA----EDIVHSMPRFG--CEPDVISYNSLIDGHCRN 104

Query: 74  GFVDKAKELFLKMKDEN---INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           G +  A  +   ++  +     P++V++NSL +GF      +E   +++ +M +   PNV
Sbjct: 105 GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNV 163

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V+++  ++  CK+G++  A +    M +  + PN   +  L+DG+C  G +  A  L+  
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M  +    NV +Y+ LI+G+CK  E++ A  +YS M+   ++P+ ++Y T+  G F+   
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
            + A K   +M   G+  D  AY   I GLC NG + EA E+   +       D+  +  
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +++   KSGR+K A  ++  L       DVV  + MI  +  +G++ +A
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 180/364 (49%), Gaps = 36/364 (9%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F  ++     PNV T+  LI+G C+ G   VA++L++EM        V    N VTYT +
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR------VRMSLNVVTYTAL 239

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           IDG CK+G + +A+E++ +M ++ + PN + Y ++I GF    D + A     +M++QG+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           + ++ ++ VI++ LC NGK+ EA+ ++E M +  + P+  ++ T+M+ +  +GR+  A  
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359

Query: 187 LFVSMESMGCKHNVFS------------------------------YSILINGYCKNKEI 216
           ++  +   G + +V +                              Y++LI+  CK  + 
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDF 419

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                L+S++   G+ PD  +Y +   GL +   +  AFKL   M + G+  D  AY T 
Sbjct: 420 IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTL 479

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I GL   G +VEA ++F  +       D   ++ LI    K G +  A +L   + R  L
Sbjct: 480 IYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539

Query: 337 IADV 340
           +  V
Sbjct: 540 VTAV 543



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 182/366 (49%), Gaps = 12/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     +LR     P+ FT N  I+ L  +   I++L     + +          P+  
Sbjct: 4   EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRG------YTPHRS 57

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +++  +CK G V  A+++   M      P+V++YNSLI G C   D   A  L +E 
Sbjct: 58  SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS-LVLES 116

Query: 122 MDQG----VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +        +P++VSFN + N   K   +DE    + +M++    PN   Y+T +D FC 
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCK 175

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           +G +  A + F SM+      NV +++ LI+GYCK  ++E A+SLY EM    +  +VV 
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G  +  +++RA +++  M    V  ++  Y T IDG  + G    A++    + 
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LDI AY  +I GLC +G+LK A E+   + +  L+ D+V +  M++A    G+M 
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355

Query: 358 KARDLF 363
            A +++
Sbjct: 356 AAVNMY 361



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 142/281 (50%), Gaps = 8/281 (2%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P+  ++NS++   C       A+ +   M   G +P+V+S+N +++  C+NG +  AS 
Sbjct: 53  TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112

Query: 152 LLE-LMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM--GCKHNVFSYSIL 206
           +LE L    G   +P+   +N+L +GF    ++   +E+FV M  M   C  NV +YS  
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGF---SKMKMLDEVFVYMGVMLKCCSPNVVTYSTW 169

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+ +CK+ E++ AL  +  M    + P+VV +  L  G  +   +E A  L+ EM+R  +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + +   Y   IDG CK G +  A E++  +   + E +   Y  +IDG  + G    A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
               +    +  D+  Y ++I  LC +GK+ +A ++  DME
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)

Query: 1   MEAAA-LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+AA  ++ KL   G EP+V   +T+I+G+ + G    A+  F            + K N
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----------CIEKAN 402

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V YT +ID LCKEG   + + LF K+ +  + P+   Y S I G C   +  +A  L  
Sbjct: 403 DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+ +G+  +++++  ++  L   G M EA ++ + M+  G+ P++ V++ L+  +   G
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522

Query: 180 RVNRAEELFVSMESMG 195
            +  A +L + M+  G
Sbjct: 523 NMAAASDLLLDMQRRG 538



 Score = 41.6 bits (96), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 24/109 (22%), Positives = 49/109 (44%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V  A +    +++     D +     I  L  +   + +++    L    Y     ++N 
Sbjct: 2   VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++  +CK G++K A ++  S+PR     DV++YN +I   C +G +  A
Sbjct: 62  VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 198/383 (51%), Gaps = 25/383 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  ++  G  PN +TYN L++G C+      A  L++E+ N     G++  PN V
Sbjct: 231 DAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNS----GLI--PNAV 284

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +TT+IDG CK     +AK++F  M    + P V  YNSL+ G   + D  EA  L+ EM
Sbjct: 285 VFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEM 344

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+  + ++++  LC  G++  A+R LE + + GV  NA  YN L+D +C  G +
Sbjct: 345 TRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNL 404

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A      M  +G + NV SYS LI+G+ K  +++ A+++Y+EM++KGI+P+VV Y  L
Sbjct: 405 EEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTAL 464

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ AF+   EM  +G++ +       +DGLC+   + +AV        +KY
Sbjct: 465 IHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKY 524

Query: 302 ELDIRA------------------YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
             DI +                  Y  LI GL   G+   A +LF  + +  +I+D  TY
Sbjct: 525 S-DIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTY 583

Query: 344 NIMIHALCADGKMDKARDLFLDM 366
            ++I   C  G +  A  L+ DM
Sbjct: 584 TLLIRGQCMLGYVLNAMMLYADM 606



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 194/358 (54%), Gaps = 9/358 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +L      P +   N +++GL +   +  A  LF+EM       G+V  P+ V
Sbjct: 129 EALYVFRRLWTL---PALPACNAVLDGLVKARRSRCAWELFDEML----RRGMV--PSVV 179

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+    +G V KA+E++ +M    I+PNV+TY S+I   C      +A+ LF  M
Sbjct: 180 TYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAM 239

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++PN  ++NV+M+  C+   ++ A  L + ++  G+ PNA V+ TL+DGFC   R 
Sbjct: 240 KEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRF 299

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+++F  M   G    V  Y+ L++G  ++ + + ALSLY EM   G+ PD    + +
Sbjct: 300 SEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIV 359

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  Q++ A +  + ++  GV  +  AY   ID  C+NG + EA+     +  +  
Sbjct: 360 VRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGV 419

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           E ++ +Y+ LIDG  K G+++IA  ++  +    +  +VVTY  +IH    +G +D A
Sbjct: 420 EPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAA 477



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 171/357 (47%), Gaps = 6/357 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G  P+V TYNTLIN     G    A  ++++M            PN +T
Sbjct: 162 AWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQ------IDPNVIT 215

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT++I  LC+EG +  A+ LF  MK+  + PN  TYN L+ G C  +D N A  L+ E++
Sbjct: 216 YTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELL 275

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN V F  +++  CK  +  EA  +   M + GV P   VYN+LMDG   +G   
Sbjct: 276 NSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQ 335

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L+  M  +G   + F+ SI++ G C   +I+ A      +   G+  +   YN L 
Sbjct: 336 EALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALI 395

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                   +E A      M   GV  +  +Y + IDG  K G +  A+ ++  +     E
Sbjct: 396 DEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIE 455

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++  Y  LI G  K+G +  A+   + +    +  + +T ++++  LC + ++  A
Sbjct: 456 PNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDA 512



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 158/312 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P       ++DGL K      A ELF +M    + P+VVTYN+LI+   Y     +A+ +
Sbjct: 141 PALPACNAVLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEM 200

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + +M+ + + PNV+++  ++  LC+ G + +A RL + M + G+RPN + YN LM G C 
Sbjct: 201 WDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQ 260

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              VN A  L+  + + G   N   ++ LI+G+CK K    A  ++ +M   G+ P V +
Sbjct: 261 GDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPV 320

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN+L  G F     + A  L+ EM R G+  D +     + GLC  G I  A      +R
Sbjct: 321 YNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVR 380

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                L+  AYN LID  C++G L+ A      +    +  +VV+Y+ +I      GKM 
Sbjct: 381 EDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQ 440

Query: 358 KARDLFLDMEAK 369
            A  ++ +M AK
Sbjct: 441 IAMAIYTEMVAK 452



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 79/253 (31%), Positives = 129/253 (50%), Gaps = 28/253 (11%)

Query: 1   MEAAALFMK-LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ AA F++ +R  G   N   YN LI+  CR G      NL E +A       V  +PN
Sbjct: 369 IQVAARFLEGVREDGVNLNAAAYNALIDEYCRNG------NLEEALATCTRMTEVGVEPN 422

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V+Y+++IDG  K G +  A  ++ +M  + I PNVVTY +LIHG       + A     
Sbjct: 423 VVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHK 482

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR----------------- 162
           EM++ G+ PN ++ +V+++ LC+  ++ +A R +  M   G++                 
Sbjct: 483 EMIENGISPNAITVSVLVDGLCRENRVQDAVRFV--MEHSGIKYSDIHSFFSNFTTEEEP 540

Query: 163 --PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             PN+ +Y TL+ G  L G+   A +LF  M   G   + F+Y++LI G C    +  A+
Sbjct: 541 LIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAM 600

Query: 221 SLYSEMLSKGIKP 233
            LY++M+  G+KP
Sbjct: 601 MLYADMMKIGVKP 613



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A+   A    +  L + G + EA+ +FR L  L     + A N ++DGL K+ R + AWE
Sbjct: 108 ASPAPALGVLVIALSQMGLLDEALYVFRRLWTLP---ALPACNAVLDGLVKARRSRCAWE 164

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF  + R  ++  VVTYN +I+A    G + KA++++  M A+
Sbjct: 165 LFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVAR 207


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 166/297 (55%), Gaps = 11/297 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  L  ++   GC P++FTY TLI G C++  +  AL +FE++ A G        +P+ 
Sbjct: 72  EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGF-------RPDV 124

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           VTY+ +IDGLCKEG + +A +LF +M K  +  PN VTYNSLI GFC     +EA  L  
Sbjct: 125 VTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLE 184

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M + G  P+VV++  +MN  CK  ++D+A  LL  M + G+ PN   + +LMDG C   
Sbjct: 185 RMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCREN 244

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R++ A  +   M    C   V++Y+ +++GYC+  ++E A     E +     P+VV +N
Sbjct: 245 RLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD--CPPNVVSFN 302

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +  GL ++++   A +L +E +R     D   Y T ID LC+   + EA  ++R +
Sbjct: 303 IMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKM 359



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/317 (34%), Positives = 162/317 (51%), Gaps = 11/317 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P   TYN+LI+GLC+      A +L EEM          C P+  TYTT+I G CK    
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSG------CIPDIFTYTTLITGFCKSKKS 105

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNV 135
           D A  +F ++      P+VVTY+ LI G C      EA  LF  M+  G   PN V++N 
Sbjct: 106 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 165

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  C+ GKMDEA  LLE M + G  P+   Y TLM+GFC   R++ A +L   M   G
Sbjct: 166 LISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKG 225

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +++ L++G C+   +  A+ +  EM  K   P V  YNT+  G   ++Q+E A 
Sbjct: 226 LTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEAR 285

Query: 256 K-LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           K + +EM       +  ++   I GLCK     EA+EL    R  +   D+  Y  +ID 
Sbjct: 286 KFMLEEMD---CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDV 342

Query: 315 LCKSGRLKIAWELFRSL 331
           LC+  ++  A  ++R +
Sbjct: 343 LCREKKVDEACRVYRKM 359



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/310 (32%), Positives = 169/310 (54%), Gaps = 3/310 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  VTY ++I GLCK     +A +L  +M      P++ TY +LI GFC +   ++A  +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFC 176
           F +++ +G +P+VV+++ +++ LCK G++ EA  L   MI+ G   PN   YN+L+ GFC
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G+++ A  L   M   G   +V +Y+ L+NG+CK   ++ A  L ++M  KG+ P+VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + +L  GL   +++  A  +  EM+R   +   + Y T +DG C+   + EA +    L
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--L 289

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
             +    ++ ++N +I GLCK  R   A EL     R     DVV Y  +I  LC + K+
Sbjct: 290 EEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKV 349

Query: 357 DKARDLFLDM 366
           D+A  ++  M
Sbjct: 350 DEACRVYRKM 359



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 154/277 (55%), Gaps = 10/277 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F +L   G  P+V TY+ LI+GLC+ G    A++LF  M          C PNTV
Sbjct: 107 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGS-----CMPNTV 161

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I G C+ G +D+A  L  +M +   +P+VVTY +L++GFC     ++A  L  +M
Sbjct: 162 TYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 221

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PNVV+F  +M+ LC+  ++ +A  +L  M +    P  + YNT++DG+C   RV
Sbjct: 222 TRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYC---RV 278

Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           N+ EE    M E M C  NV S++I+I G CK      A+ L  E   +   PDVV+Y T
Sbjct: 279 NQLEEARKFMLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTT 338

Query: 241 LFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTF 276
           +   L    +V+ A +++ +M +  G   ++  Y TF
Sbjct: 339 VIDVLCREKKVDEACRVYRKMLEEPGCLPNSITYSTF 375



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 152/278 (54%), Gaps = 3/278 (1%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           ++D    P  VTYNSLI G C A   +EA  L  EM+  G  P++ ++  ++   CK+ K
Sbjct: 45  VQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKK 104

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYS 204
            D+A R+ E ++  G RP+   Y+ L+DG C  GR+  A +LF  M +S  C  N  +Y+
Sbjct: 105 SDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYN 164

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+G+C+  +++ A++L   M   G  PDVV Y TL  G  ++ +++ A+ L ++M R 
Sbjct: 165 SLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 224

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+  +   + + +DGLC+   + +AV +   +R       +  YN ++DG C+  +L+ A
Sbjct: 225 GLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEA 284

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +    L       +VV++NIMI  LC   +  +A +L
Sbjct: 285 RKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMEL 320



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 66/208 (31%), Positives = 113/208 (54%), Gaps = 1/208 (0%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P A  YN+L+ G C   R + A +L   M   GC  ++F+Y+ LI G+CK+K+ + AL +
Sbjct: 52  PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRV 111

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA-ADTWAYRTFIDGLC 281
           + +++++G +PDVV Y+ L  GL +  +++ A  LF  M + G    +T  Y + I G C
Sbjct: 112 FEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFC 171

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           + G + EA+ L   +       D+  Y  L++G CK  RL  A++L   + R  L  +VV
Sbjct: 172 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVV 231

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
           T+  ++  LC + ++  A  +  +M  K
Sbjct: 232 TFTSLMDGLCRENRLSDAVHILGEMRRK 259


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF ++   G  PN  TY TLI+ L + G     L+L  EM +     GVV   + V
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLV 345

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D L K+G  D+ K+       +N++PN VTY  LI   C A++ +EA+ + +EM
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNVV+F+ ++N   K G +D+A+    +M + G+ PN   Y TL+DGF      
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E++  M   G K N F    L+NG  +N +IE A++L+ +    G+  D V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+   +  AFK   E+    +  D   Y  FI+ LC  G   EA      +R +  
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   YN +I   C+ G    A +L   +    +  +++TYN ++  L   G ++KA+ 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 362 LFLDM 366
           L  +M
Sbjct: 646 LLNEM 650



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 177/354 (50%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV TY   I   CRT     A +L+E M       GV+   + VT + ++ GLC++
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRD 287

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  LF +M      PN VTY +LI     A    E   L  EM+ +GV  ++V++
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M+ L K GK DE    L   +   + PN   Y  L+D  C    V+ AE++ + ME 
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                NV ++S +ING+ K   ++ A      M  +GI P+VV Y TL  G F+    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +++ +M   GV  + +   + ++GL +NG I EA+ LF+        LD   Y  LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GL K+G +  A++  + L    ++ D V YN+ I+ LC  GK  +A+    +M 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 163/331 (49%), Gaps = 6/331 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   YN  IN LC  G    A +   EM N      +  KP+  TY T+I   C++G  
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRN------MGLKPDQSTYNTMIVSHCRKGET 605

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA +L  +MK  +I PN++TYN+L+ G        +AK L  EM+  G  P+ ++   +
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    ++ ++D    + E M+  G+  +  VYNTL+   C  G   +A  +   M   G 
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +++ LI G+CK+  ++ A + Y++ML + I P++  +NTL  GL  + ++  A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM++ G+  +   Y     G  K    VEA+ L+  +    +   +  YN LI    
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           K+G +  A ELF+ + +  +     TY+I++
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 182/391 (46%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N F  ++L+NGL + G    A+ LF++ A+G+G        + V YTT+IDGL K 
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKD-ASGSG-----LSLDHVNYTTLIDGLFKA 532

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A +   ++ D N+ P+ V YN  I+  C    + EAK    EM + G++P+  ++
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++   C+ G+  +A +LL  M    ++PN   YNTL+ G   TG V +A+ L   M S
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  ++  ++    +++ ++  L ++  M++ G+  D+ +YNTL   L       +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + +EM   G+A DT  +   I G CK+ ++  A   +  +       +I  +N L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 314 GLCKSGRLKIAWELFRSLPRGVL-----------------------------------IA 338
           GL   GR+  A  +   + +  L                                   + 
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            V TYN +I      G M +A++LF DM+ +
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKR 863



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 170/365 (46%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  + +++      PNV T++++ING  + G     L+   E      E G+   PN V
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRG----LLDKATEYKRMMKERGI--NPNVV 450

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG  K    D A E++  M  E +  N    +SL++G        EA  LF + 
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDA 510

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  + V++  +++ L K G M  A +  + ++   + P+A VYN  ++  C+ G+ 
Sbjct: 511 SGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKF 570

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+     M +MG K +  +Y+ +I  +C+  E   AL L  EM    IKP+++ YNTL
Sbjct: 571 KEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTL 630

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF    VE+A  L +EM   G +  +  +R  +    ++  +   +++   +     
Sbjct: 631 VAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN L+  LC  G  + A  +   +    +  D +T+N +I   C    +D A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 362 LFLDM 366
            +  M
Sbjct: 751 TYAQM 755



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 161/366 (43%), Gaps = 46/366 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +   ++R  G +P+  TYNT+I   CR G T  AL L  EM   +       KPN +
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS------IKPNLI 625

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT------------------------ 97
           TY T++ GL   G V+KAK L  +M     +P+ +T                        
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 98  -----------YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                      YN+L+   CY     +A  +  EM+  G+ P+ ++FN ++   CK+  +
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHL 745

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A      M+   + PN   +NTL+ G    GR+  A  + + ME  G + N  +Y IL
Sbjct: 746 DNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDIL 805

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
             G+ K      A+ LY EM+ KG  P V  YN L     +   + +A +LF +MQ+ GV
Sbjct: 806 ATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS-GRLKIAW 325
              +  Y   + G  +   I    E+ + L+ +K E         +  +C++  +  + W
Sbjct: 866 HPTSCTYDILVSGWSR---IRNGTEVKKCLKDMK-EKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 326 ELFRSL 331
           +  R L
Sbjct: 922 QAQRLL 927



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 170/370 (45%), Gaps = 17/370 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A A+  ++   G   +  T NTL+ GLCR G    A  L +    G G   +    + +
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR---GGGIHAL----DVI 170

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T+I G C+ G    A  +  +M  + +  +VV YN+L+ GFC A   + A+ +   M
Sbjct: 171 GWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV PNV ++   +   C+   ++EA  L E M++ GV  +    + L+ G C  GR 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M+ +G   N  +Y  LI+   K    +  LSL  EM+S+G+  D+V Y  L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 242 FIGLFEIHQVERA-----FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  + +       F L D +  +GV      Y   ID LCK   + EA ++   +
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGV-----TYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++  ++ +I+G  K G L  A E  R +    +  +VVTY  +I         
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 357 DKARDLFLDM 366
           D A +++ DM
Sbjct: 466 DAALEVYHDM 475



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 144/316 (45%), Gaps = 10/316 (3%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P TV Y  ++  L        A  +  +M    +  + VT N+L+ G C     + A  
Sbjct: 100 RPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 117 LFIEMMDQG---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           L     D+G      +V+ +N ++   C+ G    A  + + M   G+  +   YNTL+ 
Sbjct: 157 L----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GFC  G+V+ A  +   M+  G   NV +Y+  I  YC+ K +E A  LY  M+  G+  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV  + L  GL    +   A+ LF EM + G A +   Y T ID L K G   E + L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +      +D+  Y  L+D L K G+     +  R      L  + VTY ++I ALC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 354 GKMDKARDLFLDMEAK 369
             +D+A  + L+ME K
Sbjct: 393 HNVDEAEQVLLEMEEK 408



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 41/330 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++++   +PN+ TYNTL+ GL  TG    A  L  EM +          P+++
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG------FSPSSL 660

Query: 62  T-----------------------------------YTTIIDGLCKEGFVDKAKELFLKM 86
           T                                   Y T++  LC  G   KA  +  +M
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
               I P+ +T+N+LI G C ++  + A   + +M+ Q + PN+ +FN ++  L   G++
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA  +L  M + G+ PN   Y+ L  G         A  L+  M   G    V +Y+ L
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+ + K   +  A  L+ +M  +G+ P    Y+ L  G   I       K   +M+  G 
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGF 900

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +              K G   +A  L + L
Sbjct: 901 SPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 76/158 (48%), Gaps = 6/158 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  + +++   G EPN  TY+ L  G  +  + + A+ L+ EM  G G       P   
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV-GKGFV-----PKVS 835

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I    K G + +AKELF  M+   ++P   TY+ L+ G+    +  E K    +M
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDM 895

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            ++G  P+  + + I     K G   +A RLL+ + ++
Sbjct: 896 KEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 182/354 (51%), Gaps = 8/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP+V TYNTL+ GLC+ G    A +LF  M       G    P+ VTYTT+ID  CK   
Sbjct: 98  EPDVVTYNTLLGGLCKNGRVAQACSLFGSME------GAGITPSDVTYTTLIDVFCKMCQ 151

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
            + A  L   M     +P V +Y S+I+G C     ++A  LF EM   G +P+ V++N 
Sbjct: 152 FETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNT 211

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC   ++ EA  LL +M++ G +P+   +  L++G C T R+  A  LF  M   G
Sbjct: 212 LIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQG 271

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  ++ ++++L++  C  +++  ALS+            V++Y  +F  L      +RA 
Sbjct: 272 CAPDLVTHTVLVSKLCILRKLRPALSVVRNY--PACPEAVILYTPIFRELGRRRGFDRAA 329

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M R GV  +   Y  F  GL      + A   FR +     E D+ AYN L+DG 
Sbjct: 330 RLLQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGF 389

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           CK+ RL +A ++ R + +  L  ++VTYN ++   C  GK++   +L   M ++
Sbjct: 390 CKADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSR 443



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 153/318 (48%), Gaps = 6/318 (1%)

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
           F   CKPN ++Y  ++  LC+ G +DKA     +M  E + P+V TYN +I   C A   
Sbjct: 27  FSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRI 86

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           + A    IE  +   +P+VV++N ++  LCKNG++ +A  L   M   G+ P+   Y TL
Sbjct: 87  SRA----IEFFETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 142

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D FC   +   A  L   M S  C   V+SY  +ING CKN++++ A  L+ EM   G 
Sbjct: 143 IDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGC 202

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KPD V YNTL  GL    ++  A  L   M  +G   D   +   I+GLC    I EA  
Sbjct: 203 KPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFV 262

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LF+ +       D+  +  L+  LC   +L+ A  + R+ P       V+ Y  +   L 
Sbjct: 263 LFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPALSVVRNYP--ACPEAVILYTPIFRELG 320

Query: 352 ADGKMDKARDLFLDMEAK 369
                D+A  L   M  +
Sbjct: 321 RRRGFDRAARLLQKMARR 338



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 155/299 (51%), Gaps = 4/299 (1%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT   ++D L +    ++   +F ++  ++  PN ++Y  L+   C     ++A     E
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + + P+V ++NV+++ LCK  ++  A    E M +    P+   YNTL+ G C  GR
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLGGLCKNGR 116

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V +A  LF SME  G   +  +Y+ LI+ +CK  + E A  L   M S+   P V  Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +V++A++LF+EM+  G   D   Y T I GLC    + EA +L   +    
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++ D   +  LI+GLC + R+K A+ LF+ + +     D+VT+ +++  LC   K+  A
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPA 295



 Score =  147 bits (371), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/319 (29%), Positives = 140/319 (43%), Gaps = 74/319 (23%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P V++Y ++INGLC+      A  LFEEM          CKP+ VTY T+I GLC + 
Sbjct: 167 CSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG------CKPDRVTYNTLIHGLCVKQ 220

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            + +AK+L   M +    P+ +T+ +LI G C  +   EA  LF  M  QG  P++V+  
Sbjct: 221 RLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHT 280

Query: 135 V---------------------------------IMNELCKNGKMDEASRLLELMIQIGV 161
           V                                 I  EL +    D A+RLL+ M + GV
Sbjct: 281 VLVSKLCILRKLRPALSVVRNYPACPEAVILYTPIFRELGRRRGFDRAARLLQKMARRGV 340

Query: 162 RPN-----AF------------------------------VYNTLMDGFCLTGRVNRAEE 186
            PN     AF                               YN L+DGFC   R++ AE+
Sbjct: 341 PPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRLDMAEK 400

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +   M+  G   N+ +Y+ L+  +C+  ++E    L   M+S+G +PDV  ++TL  GLF
Sbjct: 401 MVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLF 460

Query: 247 EIHQVERAFKLFDEMQRHG 265
            + Q + A+   +     G
Sbjct: 461 MVGQADAAYSFLNLAMSQG 479



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 136/274 (49%), Gaps = 4/274 (1%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           VT N+L+     A    +   +F  +  Q  +PN +S+  ++  LC+ GK+D+A   +  
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M +  + P+ F YN ++D  C   R++RA E F +M     + +V +Y+ L+ G CKN  
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR 116

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A SL+  M   GI P  V Y TL     ++ Q E A+ L   M     +   ++Y +
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+GLCKN  + +A +LF  +++   + D   YN LI GLC   RL  A +L   +    
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              D +T+  +I  LC   ++ +A  LF  M  +
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQ 270



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A   F ++   G EP++  YN L++G C+       L++ E+M     + G+   PN 
Sbjct: 361 MRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADR----LDMAEKMVRYMDQSGL--PPNI 414

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T++   C++G V+   EL   M      P+V T+++L+ G       + A      
Sbjct: 415 VTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTLVAGLFMVGQADAAYSFLNL 474

Query: 121 MMDQG 125
            M QG
Sbjct: 475 AMSQG 479


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  197 bits (501), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 199/372 (53%), Gaps = 12/372 (3%)

Query: 1   MEAAALFMKLRVFGC-EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M A A+F ++   G  +P+V TY T+I G C+ G    A N+F+EM          CKPN
Sbjct: 234 MLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEMG---------CKPN 284

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKD-ENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            VTY T+I+G CK+G ++ A ++  +M + E+  P+ VTY +LI G+C   +  EA    
Sbjct: 285 LVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYM 344

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ +  +PNV+++N I+  LC NG +DEA R++  M   G++ N   + +++ G C+ 
Sbjct: 345 EEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVV 404

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+++ A      M  +G + +  +Y +++N YCK  + + A+SL  EM S+GI P V  +
Sbjct: 405 GKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSF 464

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLR 297
           N +F  L E  + ++A  +  +M++ G   +  +Y T IDGLCK  G + E  E    + 
Sbjct: 465 NAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMC 524

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              + LD   Y+ L+ G C+ G   +A  LF  +     + ++ ++   +  L A  K  
Sbjct: 525 RNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAF 584

Query: 358 KARDLFLDMEAK 369
           +    F +M  +
Sbjct: 585 EVEKFFEEMSRR 596



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/345 (29%), Positives = 182/345 (52%), Gaps = 13/345 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+PN+ TYNT+ING C+ G    A+ + ++M          C P+TVTYTT+IDG CK 
Sbjct: 280 GCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETED-----CMPDTVTYTTLIDGYCKR 334

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A +   +M   N  PNV+TYN++I+G C   + +EAK +   M   G++ NV + 
Sbjct: 335 GELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATH 394

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             I+  LC  GK+D+A+R L+ M+ +G+  +A  Y  +++ +C  G+ + A  L   M+S
Sbjct: 395 TSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKS 454

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE----IH 249
            G   +V S++ +     ++ + + A  +  +M   G  P+ + Y+T+  GL +    +H
Sbjct: 455 RGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMH 514

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +VE   +  D+M R+G   D   Y   + G C++G    A+ LF  +  + Y +++ ++ 
Sbjct: 515 EVE---EFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFL 571

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY-NIMIHALCAD 353
             + GL    +     + F  + R     D+  Y  I+   LC +
Sbjct: 572 AFVKGLSAKEKAFEVEKFFEEMSRRCPGIDIHKYRRILDEHLCKN 616



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 81/297 (27%), Positives = 152/297 (51%), Gaps = 5/297 (1%)

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVV 131
            G +  A   F + K       + +YN+++  F  AN    A+ +F +++ +G V+P+V 
Sbjct: 195 RGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVS 254

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++  I+   CK G ++ A  + +   ++G +PN   YNT+++GFC  G +  A ++   M
Sbjct: 255 TYTTIIRGYCKMGMIENAKNVFD---EMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQM 311

Query: 192 -ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
            E+  C  +  +Y+ LI+GYCK  E+E A+    EM+S+  +P+V+ YN +  GL     
Sbjct: 312 TETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGN 371

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A ++   M+ +G+  +   + + + GLC  G + +A    + +  L  E D +AY  
Sbjct: 372 VDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGV 431

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +++  CK G+   A  L + +    +   V ++N +   L   GK DKA  +   M+
Sbjct: 432 VVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMK 488


>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
 gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
          Length = 1139

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 132/435 (30%), Positives = 199/435 (45%), Gaps = 76/435 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  KL   G  PNVF YN LI+ LC+      A  LF+EMA G G      +PN V
Sbjct: 321 EAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMA-GRG-----LEPNEV 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  LCK G ++ A  LF KM+D+ I   V  YNSLI+G+C     + A+ L   M
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNG-----------------------------------KM 146
           + +G+ P   S++ ++  LC+NG                                   KM
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           DEA+RL + MI   V PN   +N +++G+CL G + +A +L+  M  MG K + ++Y  L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554

Query: 207 INGYCKNKEIEGA-----------------------------------LSLYSEMLSKGI 231
           I+G C    +  A                                     L+ EM  +G+
Sbjct: 555 ISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGV 614

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           K D+V +  +     + H  E++  LF EM+  GV  D   Y   ID L K   +++A+ 
Sbjct: 615 KLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALN 674

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            +  + +  Y  +   +  LI+ LCKSG L  A  L + +  G ++ +  TYN  +    
Sbjct: 675 CWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFA 734

Query: 352 ADGKMDKARDLFLDM 366
            +G M+KA+DL   M
Sbjct: 735 TEGDMEKAKDLHSAM 749



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 186/386 (48%), Gaps = 31/386 (8%)

Query: 14  GCEPNVFTYNTLINGLCR---------TGHTIVALNLFEEMANGN-------------GE 51
           G   +  TY TL+ G CR           H ++ L      AN +               
Sbjct: 263 GVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEA 322

Query: 52  FGVVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           F + CK       PN   Y  +ID LCK    D A  LF +M    + PN VTY  LIH 
Sbjct: 323 FSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHA 382

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C      +A CLF +M D+G++  V  +N ++N  CK G +D A  LL  M++ G+ P 
Sbjct: 383 LCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPT 442

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           A  Y+ L+ G C  G ++   EL   M   G   N ++++ LING+CK+K+++ A  L+ 
Sbjct: 443 AASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFD 502

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M+   + P+ V +N +  G   +  + +AF+L+D+M   G+  D + YR+ I GLC   
Sbjct: 503 KMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTS 562

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP-RGVLIADVVTY 343
            + +A E    L      L+  +   L+ G  + GR    + L+  +  RGV + D+V++
Sbjct: 563 GVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKL-DLVSF 621

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
            I+++A       +K+  LF +M+ +
Sbjct: 622 TIIVYAALKQHDKEKSCVLFREMKEQ 647



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 175/364 (48%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K+   G   + + Y   I   C + +   A  L   M +         K + V 
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEG------VKASAVP 235

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++ GLCK   V +A E+   M +  +  + VTY +L++GFC   +   A  +  +M+
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P+  + + +++EL K   ++EA  L   +  +G+ PN F YN L+D  C   R +
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFD 355

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+ LF  M   G + N  +Y+ILI+  CK   IE AL L+ +M  KGIK  V  YN+L 
Sbjct: 356 DADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLI 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +   ++RA  L   M + G+     +Y   I GLC+NG +   +EL R +      
Sbjct: 416 NGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   +  LI+G CK  ++  A  LF  +    +I + VT+N+MI   C  G + KA  L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535

Query: 363 FLDM 366
           +  M
Sbjct: 536 YDQM 539



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA LF K+      PN  T+N +I G C  G+   A  L+++M     E G+  KP+  
Sbjct: 496 EAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV----EMGL--KPDNY 549

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLC    V KA E    +++     N  +  +L++GF     + E   L+ EM
Sbjct: 550 TYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEM 609

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ ++VSF +I+    K    +++  L   M + GV+P+   Y  ++D       +
Sbjct: 610 AVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENM 669

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A   +  M   G   N  ++++LIN  CK+  +  A  L  EML+  + P+   YN  
Sbjct: 670 IQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCF 729

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                    +E+A  L   M + G  A   ++   I GLCK G I EA++L   +    +
Sbjct: 730 LDYFATEGDMEKAKDLHSAMLQ-GHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGF 788

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +Y+ +I  LCK G +  A+EL+  +    L  DVV YNI I      G+ DKA  
Sbjct: 789 SPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALG 848

Query: 362 LFLDM 366
           ++ +M
Sbjct: 849 IYTNM 853



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 162/343 (47%), Gaps = 35/343 (10%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N  T + I+  L K      A++LF KM    ++ +   Y + I  +C + + + A+ L 
Sbjct: 162 NQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLV 221

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-- 176
           + M  +GV+ + V +NV+M  LCKN ++ EA  +  +M+ IGV  +   Y TL+ GFC  
Sbjct: 222 VRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRM 281

Query: 177 ----LTGRVN----------------------RAEELFVSMESMGCK-------HNVFSY 203
               +  R+                       R +EL     S+ CK        NVF+Y
Sbjct: 282 EELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + LI+  CKN+  + A  L+ EM  +G++P+ V Y  L   L +   +E A  LFD+M+ 
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+    + Y + I+G CK G +  A  L   +          +Y+ LI GLC++G L  
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             EL R +    +  +  T+  +I+  C D KMD+A  LF  M
Sbjct: 462 CMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKM 504



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 132/244 (54%), Gaps = 7/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  LF +++  G +P+   Y  +I+ L +  + I ALN +++M            PNTV
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDG------YSPNTV 689

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +I+ LCK G++  A+ L  +M   N+ PN  TYN  +  F    D  +AK L   M
Sbjct: 690 THTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAM 749

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG   ++VSFN+++  LCK GK+ EA  L+  + + G  P+   Y+T++   C  G +
Sbjct: 750 L-QGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDI 808

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A EL+  M   G K +V +Y+I I     + E + AL +Y+ M+  G++P+   Y  L
Sbjct: 809 NKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868

Query: 242 FIGL 245
             G+
Sbjct: 869 LSGI 872



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 151/298 (50%), Gaps = 7/298 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N F+   L+ G  R G      +L++EMA          K + V++T I+    K+   +
Sbjct: 582 NNFSLTALLYGFFREGRFTETYHLWDEMAVRG------VKLDLVSFTIIVYAALKQHDKE 635

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K+  LF +MK++ + P+ + Y  +I       +  +A   + +M+  G  PN V+  V++
Sbjct: 636 KSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLI 695

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK+G +  A  L + M+   V PN F YN  +D F   G + +A++L  +M   G  
Sbjct: 696 NNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQ-GHL 754

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ S++ILI G CK  +I+ A+ L S++   G  PD + Y+T+   L ++  + +AF+L
Sbjct: 755 ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFEL 814

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++EM   G+  D  AY  FI     +G   +A+ ++  +     + +   Y  L+ G+
Sbjct: 815 WNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 123/248 (49%)

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+  N  + + I+  L K  +   A  L + M+Q GV  + +VY   +  +C +  +
Sbjct: 155 LSSGITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNL 214

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L V MES G K +   Y++L+ G CKN  ++ A+ + + M++ G+  D V Y TL
Sbjct: 215 DGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTL 274

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + ++E A ++  +M R G           ID L K   + EA  L   L  L  
Sbjct: 275 VYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGM 334

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ AYN LID LCK+ R   A  LF+ +    L  + VTY I+IHALC  G ++ A  
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALC 394

Query: 362 LFLDMEAK 369
           LF  M  K
Sbjct: 395 LFDKMRDK 402



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 129/276 (46%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I  N  T + ++        +  A+ LF +M+  GV  +   +   +   C++  +D A 
Sbjct: 159 ITVNQYTASQILFSLVKIRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGAR 218

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L+  M   GV+ +A  YN LM G C   RV  A E+   M ++G   +  +Y  L+ G+
Sbjct: 219 GLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGF 278

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+ +E+E AL +  +M+  G  P     + +   L +   VE AF L  ++   G+  + 
Sbjct: 279 CRMEELEMALRITHDMIRLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNV 338

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           +AY   ID LCKN    +A  LF+ +     E +   Y  LI  LCK G ++ A  LF  
Sbjct: 339 FAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDK 398

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +   V  YN +I+  C  G +D+AR L   M
Sbjct: 399 MRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 183/362 (50%), Gaps = 10/362 (2%)

Query: 9   KLRVF----GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           K+R F    G  P+V+TY+TLI   C+      A  + EEM     E G  C  N VTY 
Sbjct: 229 KVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMR----ETG--CSLNVVTYN 282

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC+ G +++A     +M+D  + P+  TY ++I+G C     ++AKCL  EM   
Sbjct: 283 TLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCA 342

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PNVV ++ +++   + G  DEA ++++ M   GV+PN   Y+ L+ G C  GR+ RA
Sbjct: 343 GLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRA 402

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +   M  +G   +  +Y+++I G+ +    E A  L +EM   GI P+V  Y+ +  G
Sbjct: 403 SRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIING 462

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +I + ERA  L ++M   G+  + + Y   I G C+ G    A E  + +       D
Sbjct: 463 LCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPD 522

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  YN LI GL   G++  A E +  +       +  TY  +IH     G ++KA  L  
Sbjct: 523 LYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLH 582

Query: 365 DM 366
            M
Sbjct: 583 QM 584



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 193/396 (48%), Gaps = 47/396 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +  ++R  GC  NV TYNTLI GLCR G    A    +EM     ++G+V  P+  
Sbjct: 261 SAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEME----DYGLV--PDGF 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  II+GLCK G  D+AK L  +M    + PNVV Y++LI GF    + +EA  +  EM
Sbjct: 315 TYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEM 374

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GVQPN ++++ ++  LCK G+M  ASR+L+ M +IG   +   YN +++G     R 
Sbjct: 375 SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHL---RQ 431

Query: 182 NRAEELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK------ 232
           +  EE F+ +  M   G   NV++YSI+ING C+  E E A  L  +M++ G+K      
Sbjct: 432 HNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVY 491

Query: 233 -----------------------------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
                                        PD+  YN+L IGL  + +++ A + +DEM  
Sbjct: 492 APLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLE 551

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G   + + Y   I G    G + +A +L   +       +   Y  +++G  KS  L+ 
Sbjct: 552 KGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEK 611

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                +S+    L+ D   Y I+IH L + G M  A
Sbjct: 612 VSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAA 647



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 187/394 (47%), Gaps = 46/394 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  L  ++R  G  PNV+TY+ +INGLC+ G +  A  L E+M A+G        KPN 
Sbjct: 436 EAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADG-------LKPNA 488

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  +I G C+EG    A E   KM  EN+ P++  YNSLI G       +EA   + E
Sbjct: 489 FVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDE 548

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G QPN  ++  +++     G +++A +LL  M+  G+ PN F+Y  +++G+  +  
Sbjct: 549 MLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDN 608

Query: 181 VNRAEELFVSMESMGCK----------HNVFS-------------------------YSI 205
           + +      SM   G            HN+ S                         Y  
Sbjct: 609 LEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGS 668

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+G+CK  ++E A+ L  EM  KGI+P +  YN L  G  +   +  A  +F+ +   G
Sbjct: 669 LISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKG 728

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +   Y T IDG CK G I +A++L+  +       D   Y+ L  G   SG L+ A 
Sbjct: 729 LPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQAL 788

Query: 326 ELFRSL-PRGVLIADVVTYNIMIHALCADGKMDK 358
            +   +  RG  I  + ++N ++H  C  GK+ +
Sbjct: 789 FITEEMIARGYAI--ISSFNTLVHGFCKRGKLQE 820



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 183/394 (46%), Gaps = 29/394 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  +  ++   G +PN  TY+ LI GLC+ G    A  + ++M                
Sbjct: 366 EAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVI 425

Query: 47  -----NGNGEFGVV---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                  N E   +           PN  TY+ II+GLC+ G  ++A  L  +M  + + 
Sbjct: 426 EGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLK 485

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN   Y  LI G+C    ++ A     +M  + + P++  +N ++  L   GKMDEA   
Sbjct: 486 PNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEY 545

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + M++ G +PN F Y  L+ G+ + G + +AE+L   M + G   N F Y+ ++ GY K
Sbjct: 546 YDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFK 605

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +  +E   S    ML KG+ PD  +Y  +   L     ++ A  +   ++++G+  D+  
Sbjct: 606 SDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLI 665

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + I G CK   + +AV L   +     E  I  YN LIDG CKS  +  A  +F S+ 
Sbjct: 666 YGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSII 725

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L  + VTY  +I   C  G +  A DL+ +M
Sbjct: 726 CKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEM 759



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 91/308 (29%), Positives = 147/308 (47%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V    ++D   K G V    E+ L MKD  + P++   N L+     A+  +    +   
Sbjct: 174 VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGF 233

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+V +++ ++   CK   ++ A +++E M + G   N   YNTL+ G C  G 
Sbjct: 234 MEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGA 293

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A      ME  G   + F+Y  +ING CK    + A  L  EM   G+ P+VV+Y+T
Sbjct: 294 IEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYST 353

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G       + AFK+  EM   GV  +   Y   I GLCK G +  A  + + +  + 
Sbjct: 354 LIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIG 413

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           Y  D   YN +I+G  +    + A+ L   + +G +  +V TY+I+I+ LC  G+ ++A 
Sbjct: 414 YMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERAS 473

Query: 361 DLFLDMEA 368
            L   M A
Sbjct: 474 GLLEQMIA 481



 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 153/303 (50%), Gaps = 28/303 (9%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   Y  +I+ L  +GH   A+++   +       G+V  P+++ Y ++I G CK 
Sbjct: 623 GLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKN----GLV--PDSLIYGSLISGFCKA 676

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             ++KA  L  +M  + I P +  YN+LI GFC ++D + A+ +F  ++ +G+ PN V++
Sbjct: 677 ADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTY 736

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++  CK G + +A  L   M+  GV P+AFVY+ L  G   +G + +A  LF++ E 
Sbjct: 737 TTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQA--LFITEEM 794

Query: 194 MGCKHNVFS-YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           +   + + S ++ L++G+CK  +++  +     M+ K I P ++    + IGL E  ++ 
Sbjct: 795 IARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLS 854

Query: 253 RAFKLFDEMQRHGVA-ADTWAYRTF------------------IDGLCKNGYIVEAVELF 293
            A  +F E+Q+   +  DT    +                   I   CK GY+ +A+ L 
Sbjct: 855 EAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHNMIQSHCKQGYLDKALMLH 914

Query: 294 RTL 296
             L
Sbjct: 915 DAL 917



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 131/273 (47%), Gaps = 37/273 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---P 58
           +A  L  ++   G EP +  YN LI+G C++     A N+F           ++CK   P
Sbjct: 681 KAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNS---------IICKGLPP 731

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N VTYTT+IDG CK G +  A +L+ +M  E + P+   Y+ L  G   + D  +A  + 
Sbjct: 732 NCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFIT 791

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ +G    + SFN +++  CK GK+ E  + L +M+   + P+      ++ G    
Sbjct: 792 EEMIARGYA-IISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEA 850

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+++ A  +FV ++     H               ++ +   SL+++M+++G+ P  VI+
Sbjct: 851 GKLSEAHTIFVELQQKNASH---------------RDTDHLSSLFTDMINQGLVPLDVIH 895

Query: 239 NTLFIGLFEIH----QVERAFKLFDEMQRHGVA 267
           N     + + H     +++A  L D +   G A
Sbjct: 896 N-----MIQSHCKQGYLDKALMLHDALVAKGRA 923


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF ++   G  PN  TY TLI+ L + G     L+L  EM +     GVV   + V
Sbjct: 292 EAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLV 345

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D L K+G  D+ K+       +N++PN VTY  LI   C A++ +EA+ + +EM
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNVV+F+ ++N   K G +D+A+    +M + G+ PN   Y TL+DGF      
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E++  M   G K N F    L+NG  +N +IE A++L+ +    G+  D V Y TL
Sbjct: 466 DAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+   +  AFK   E+    +  D   Y  FI+ LC  G   EA      +R +  
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGL 585

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   YN +I   C+ G    A +L   +    +  +++TYN ++  L   G ++KA+ 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 362 LFLDM 366
           L  +M
Sbjct: 646 LLNEM 650



 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 177/354 (50%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV TY   I   CRT     A +L+E M       GV+   + VT + ++ GLC++
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRD 287

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  LF +M      PN VTY +LI     A    E   L  EM+ +GV  ++V++
Sbjct: 288 GRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M+ L K GK DE    L   +   + PN   Y  L+D  C    V+ AE++ + ME 
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                NV ++S +ING+ K   ++ A      M  +GI P+VV Y TL  G F+    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +++ +M   GV  + +   + ++GL +NG I EA+ LF+        LD   Y  LID
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GL K+G +  A++  + L    ++ D V YN+ I+ LC  GK  +A+    +M 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMR 581



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 168/345 (48%), Gaps = 11/345 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   YN  IN LC  G    A +   EM N      +  KP+  TY T+I   C++G  
Sbjct: 552 PDAVVYNVFINCLCMLGKFKEAKSFLTEMRN------MGLKPDQSTYNTMIVSHCRKGET 605

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA +L  +MK  +I PN++TYN+L+ G        +AK L  EM+  G  P+ ++   +
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    ++ ++D    + E M+  G+  +  VYNTL+   C  G   +A  +   M   G 
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +++ LI G+CK+  ++ A + Y++ML + I P++  +NTL  GL  + ++  A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM++ G+  +   Y     G  K    VEA+ L+  +    +   +  YN LI    
Sbjct: 786 VLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           K+G +  A ELF+ + +  +     TY+I++      G  D AR+
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILV-----SGWYDLARE 885



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 182/391 (46%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N F  ++L+NGL + G    A+ LF++ A+G+G        + V YTT+IDGL K 
Sbjct: 479 GVKVNKFIVDSLVNGLRQNGKIEEAMALFKD-ASGSG-----LSLDHVNYTTLIDGLFKA 532

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A +   ++ D N+ P+ V YN  I+  C    + EAK    EM + G++P+  ++
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTY 592

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++   C+ G+  +A +LL  M    ++PN   YNTL+ G   TG V +A+ L   M S
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  ++  ++    +++ ++  L ++  M++ G+  D+ +YNTL   L       +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + +EM   G+A DT  +   I G CK+ ++  A   +  +       +I  +N L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 314 GLCKSGRLKIAWELFRSLPRGVL-----------------------------------IA 338
           GL   GR+  A  +   + +  L                                   + 
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVP 832

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            V TYN +I      G M +A++LF DM+ +
Sbjct: 833 KVSTYNALISDFTKAGMMTQAKELFKDMQKR 863



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 170/365 (46%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  + +++      PNV T++++ING  + G     L+   E      E G+   PN V
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRG----LLDKATEYKRMMKERGI--NPNVV 450

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG  K    D A E++  M  E +  N    +SL++G        EA  LF + 
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDA 510

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  + V++  +++ L K G M  A +  + ++   + P+A VYN  ++  C+ G+ 
Sbjct: 511 SGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKF 570

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+     M +MG K +  +Y+ +I  +C+  E   AL L  EM    IKP+++ YNTL
Sbjct: 571 KEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTL 630

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF    VE+A  L +EM   G +  +  +R  +    ++  +   +++   +     
Sbjct: 631 VAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN L+  LC  G  + A  +   +    +  D +T+N +I   C    +D A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 362 LFLDM 366
            +  M
Sbjct: 751 TYAQM 755



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 140/313 (44%), Gaps = 41/313 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +   ++R  G +P+  TYNT+I   CR G T  AL L  EM   +       KPN +
Sbjct: 572 EAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS------IKPNLI 625

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT------------------------ 97
           TY T++ GL   G V+KAK L  +M     +P+ +T                        
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 98  -----------YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                      YN+L+   CY     +A  +  EM+  G+ P+ ++FN ++   CK+  +
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHL 745

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A      M+   + PN   +NTL+ G    GR+  A  + + ME  G + N  +Y IL
Sbjct: 746 DNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDIL 805

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
             G+ K      A+ LY EM+ KG  P V  YN L     +   + +A +LF +MQ+ GV
Sbjct: 806 ATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865

Query: 267 AADTWAYRTFIDG 279
              +  Y   + G
Sbjct: 866 HPTSCTYDILVSG 878



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 170/370 (45%), Gaps = 17/370 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A A+  ++   G   +  T NTL+ GLCR G    A  L +    G G   +    + +
Sbjct: 118 HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR---GGGIHAL----DVI 170

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T+I G C+ G    A  +  +M  + +  +VV YN+L+ GFC A   + A+ +   M
Sbjct: 171 GWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM 230

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GV PNV ++   +   C+   ++EA  L E M++ GV  +    + L+ G C  GR 
Sbjct: 231 KEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRF 290

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M+ +G   N  +Y  LI+   K    +  LSL  EM+S+G+  D+V Y  L
Sbjct: 291 SEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350

Query: 242 FIGLFEIHQVERA-----FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
              L +  + +       F L D +  +GV      Y   ID LCK   + EA ++   +
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPNGV-----TYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++  ++ +I+G  K G L  A E  R +    +  +VVTY  +I         
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 357 DKARDLFLDM 366
           D A +++ DM
Sbjct: 466 DAALEVYHDM 475



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 144/316 (45%), Gaps = 10/316 (3%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P TV Y  ++  L        A  +  +M    +  + VT N+L+ G C     + A  
Sbjct: 100 RPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 117 LFIEMMDQG---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           L     D+G      +V+ +N ++   C+ G    A  + + M   G+  +   YNTL+ 
Sbjct: 157 L----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GFC  G+V+ A  +   M+  G   NV +Y+  I  YC+ K +E A  LY  M+  G+  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV  + L  GL    +   A+ LF EM + G A +   Y T ID L K G   E + L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +      +D+  Y  L+D L K G+     +  R      L  + VTY ++I ALC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKA 392

Query: 354 GKMDKARDLFLDMEAK 369
             +D+A  + L+ME K
Sbjct: 393 HNVDEAEQVLLEMEEK 408



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 123/282 (43%), Gaps = 29/282 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---- 57
           +A  L  ++++   +PN+ TYNTL+ GL  TG    A  L  EM +       +      
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVL 666

Query: 58  -------------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                     +   Y T++  LC  G   KA  +  +M    I 
Sbjct: 667 QACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ +T+N+LI G C ++  + A   + +M+ Q + PN+ +FN ++  L   G++ EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M + G+ PN   Y+ L  G         A  L+  M   G    V +Y+ LI+ + K
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
              +  A  L+ +M  +G+ P    Y+ L  G +++ + +++
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKS 888



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 91/177 (51%), Gaps = 6/177 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  T+N LI G C++ H   A   + +M + N        PN  T+ T++ GL   
Sbjct: 724 GIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQN------ISPNIATFNTLLGGLESV 777

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A  + ++M+   + PN +TY+ L  G    ++  EA  L+ EM+ +G  P V ++
Sbjct: 778 GRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTY 837

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           N ++++  K G M +A  L + M + GV P +  Y+ L+ G+    R  +++  + +
Sbjct: 838 NALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWYDLAREQKSQNTYFT 894


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 198/368 (53%), Gaps = 7/368 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +  K+      PNVFTY  L+NGLCR+  T +A  +F+EM   NG     CKPN 
Sbjct: 105 MDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR-NG-----CKPNP 158

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+I  L + G +D+A  + ++ +   +  +V+T  +++ G C A+  ++A     E
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEE 218

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL-MIQIGVRPNAFVYNTLMDGFCLTG 179
           M   GV+PN V+++ +++   ++G++D   R  E    + G    A  Y   +D  C  G
Sbjct: 219 MRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAG 278

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            ++RA +    +   G   +V +YS+LIN + +  + + +L L  +M   G+KPDVV Y+
Sbjct: 279 YLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYS 338

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL   L +  + + AF+L + M+  G   +   Y + +DGLCK+G + E   ++  +   
Sbjct: 339 TLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKS 398

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +   D+  Y+ +++GL K+G L  A +LF  +       D   Y+++I +LC  GK+++A
Sbjct: 399 RCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458

Query: 360 RDLFLDME 367
             ++  ME
Sbjct: 459 CGMYHGME 466



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 159/309 (51%), Gaps = 2/309 (0%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  ++DGLC  G  ++A EL  ++      P V  YN +I G C A+   +A  +  +
Sbjct: 55  TTYKLVVDGLCGAGMANQALELVRELSG-VYTPTVFIYNGIITGLCRASRVMDAYKVLEK 113

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + PNV ++ +++N LC++ K   A  + + M + G +PN   Y TL+      G 
Sbjct: 114 MVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGE 173

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  + +   S+    +V + + ++ G CK   ++ AL    EM   G++P+ V Y+ 
Sbjct: 174 IDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSN 233

Query: 241 LFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L  G  +  +++R  + F+E + R G + +  AY  ++D LCK GY+  A +    LR  
Sbjct: 234 LVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQS 293

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+  Y+ LI+   ++G+   + EL   + R  +  DVVTY+ +I+ LC + K   A
Sbjct: 294 GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDA 353

Query: 360 RDLFLDMEA 368
             L   MEA
Sbjct: 354 FRLLELMEA 362



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 1/256 (0%)

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           AK L   +++ G + +  +F ++  +L +  K  E  RL  L+   GV      Y  ++D
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C  G  N+A EL   +  +     VF Y+ +I G C+   +  A  +  +M+ + I P
Sbjct: 63  GLCGAGMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +V  Y  L  GL   ++ + A ++F EM+R+G   +   Y T I  L + G I EA+ + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
              R L+   D+     ++ GLCK+ RL  A +    + +  +  + VTY+ ++H     
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 354 GKMDKARDLFLDMEAK 369
           G++D+    F + +A+
Sbjct: 242 GELDRVIRFFEEEKAR 257


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  197 bits (501), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 185/351 (52%), Gaps = 6/351 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V TY TL+ GLC+     + L + +EM        +   P+    +++++GL K G 
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGK 347

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +++A  L  ++ D  ++PN+  YN+LI   C    ++EA+ LF  M   G++PN V++++
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  C+ GK+D A   L  M+  G++ + + YN+L++G C  G ++ AE     M +  
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            +  V +Y+ L+ GYC   +I  AL LY EM  KGI P +  + TL  GLF    +  A 
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           KLF+EM    V  +   Y   I+G C+ G + +A E  + +       D  +Y  LI GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C +G+   A      L +G    + + Y  ++H  C +GK+++A  +  +M
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 174/358 (48%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++  FG  PN+F YN LI+ LC+      A  LF+ M    G+ G+  +PN V
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM----GKIGL--RPNDV 403

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +ID  C+ G +D A     +M D  +  +V  YNSLI+G C   D + A+    EM
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ ++P VV++  +M   C  GK+++A RL   M   G+ P+ + + TL+ G    G +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M     K N  +Y+++I GYC+  ++  A     EM  KGI PD   Y  L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    Q   A    D + +     +   Y   + G C+ G + EA+ + + +     
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +LD+  Y  LIDG  K    K+ + L + +    L  D V Y  MI A    G   +A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 182/352 (51%), Gaps = 8/352 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP V TY +L+ G C  G    AL L+ EM  G G       P+  T+TT++ GL + G 
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMT-GKG-----IAPSIYTFTTLLSGLFRAGL 522

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A +LF +M + N+ PN VTYN +I G+C   D ++A     EM ++G+ P+  S+  
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC  G+  EA   ++ + +     N   Y  L+ GFC  G++  A  +   M   G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              ++  Y +LI+G  K+K+ +    L  EM  +G+KPD VIY ++     +    + AF
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            ++D M   G   +   Y   I+GLCK G++ EA  L   ++ +    +   Y C +D L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762

Query: 316 CKSG-RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            K    ++ A EL  ++ +G L+A+  TYN++I   C  G++++A +L   M
Sbjct: 763 TKGEVDMQKAVELHNAILKG-LLANTATYNMLIRGFCRQGRIEEASELITRM 813



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 198/417 (47%), Gaps = 73/417 (17%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------FGVV--------------- 55
           P V T + L++GL +  H  +A+ LF +M +           GV+               
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 56  --------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
                   C  N V Y  +IDGLCK+  V +A  +   +  +++ P+VVTY +L++G C 
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 108 ANDWNEAKCLFIEMMDQ---------------------------------------GVQP 128
             ++     + +EMMD+                                       GV P
Sbjct: 310 VQEFE----IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N+  +N +++ LCK  K  EA  L + M +IG+RPN   Y+ L+D FC  G+++ A    
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G K +V+ Y+ LING+CK  +I  A    +EM++K ++P VV Y +L  G    
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++ +A +L+ EM   G+A   + + T + GL + G I +AV+LF  +     + +   Y
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           N +I+G C+ G +  A+E  + +    ++ D  +Y  +IH LC  G+  +A+ +F+D
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVD 601



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 207/467 (44%), Gaps = 99/467 (21%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  LF ++   G  PN  TY+ LI+  CR G    AL+   EM                
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444

Query: 47  NGNGEFGVVC--------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           NG+ +FG +               +P  VTYT+++ G C +G ++KA  L+ +M  + I 
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++ T+ +L+ G   A    +A  LF EM +  V+PN V++NV++   C+ G M +A   
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M + G+ P+ + Y  L+ G CLTG+ + A+     +    C+ N   Y+ L++G+C+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624

Query: 213 NKEIEGALSLYSEMLSKGI-----------------------------------KPDVVI 237
             ++E ALS+  EM+ +G+                                   KPD VI
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y ++     +    + AF ++D M   G   +   Y   I+GLCK G++ EA  L   ++
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744

Query: 298 -----------------ILKYELDIR------------------AYNCLIDGLCKSGRLK 322
                            + K E+D++                   YN LI G C+ GR++
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A EL   +    +  D +TY  MI+ LC    + KA +L+  M  K
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 196/403 (48%), Gaps = 47/403 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++   G  P+++T+ TL++GL R G    A+ LF EMA  N       KPN V
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRV 543

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+G C+EG + KA E   +M ++ I P+  +Y  LIHG C     +EAK +F++ 
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDG 602

Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV------------------- 161
           + +G  + N + +  +++  C+ GK++EA  + + M+Q GV                   
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662

Query: 162 ----------------RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                           +P+  +Y +++D    TG    A  ++  M + GC  N  +Y+ 
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV--ERAFKLFDEMQR 263
           +ING CK   +  A  L S+M      P+ V Y   F+ +    +V  ++A +L + + +
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC-FLDILTKGEVDMQKAVELHNAILK 781

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G+ A+T  Y   I G C+ G I EA EL   +       D   Y  +I+ LC+   +K 
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A EL+ S+    +  D V YN +IH  C  G+M KA +L  +M
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 162/327 (49%), Gaps = 8/327 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ ++Y  LI+GLC TG    A    + +  GN      C+ N + YT ++ G C+E
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN------CELNEICYTGLLHGFCRE 625

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +++A  +  +M    ++ ++V Y  LI G     D      L  EM D+G++P+ V +
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++   K G   EA  + +LMI  G  PN   Y  +++G C  G VN AE L   M+ 
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745

Query: 194 MGCKHNVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           +    N  +Y   ++   K + +++ A+ L++ +L KG+  +   YN L  G     ++E
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIE 804

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L   M   GV+ D   Y T I+ LC+   + +A+EL+ ++       D  AYN LI
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIAD 339
            G C +G +  A EL   + R  LI +
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLIPN 891



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/304 (30%), Positives = 143/304 (47%), Gaps = 31/304 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA      L    CE N   Y  L++G CR G    AL++ +EM     +  +VC     
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                   KP+ V YT++ID   K G   +A  ++  M +E   
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD-EASR 151
           PN VTY ++I+G C A   NEA+ L  +M      PN V++   ++ L K G++D + + 
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAV 773

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
            L   I  G+  N   YN L+ GFC  GR+  A EL   M   G   +  +Y+ +IN  C
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +  +++ A+ L++ M  KGI+PD V YNTL  G     ++ +A +L +EM R G+  +  
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893

Query: 272 AYRT 275
             RT
Sbjct: 894 TSRT 897



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 143/312 (45%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P   T + ++ GL K      A ELF  M    I P+V  Y  +I   C   D + AK +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M   G   N+V +NV+++ LCK  K+ EA  + + +    ++P+   Y TL+ G C 
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
                   E+   M  +    +  + S L+ G  K  +IE AL+L   ++  G+ P++ +
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L   L +  +   A  LFD M + G+  +   Y   ID  C+ G +  A+     + 
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               +L +  YN LI+G CK G +  A      +    L   VVTY  ++   C+ GK++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 358 KARDLFLDMEAK 369
           KA  L+ +M  K
Sbjct: 490 KALRLYHEMTGK 501



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 113/235 (48%), Gaps = 1/235 (0%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           F++++    ++ ++ +   + ++MI ++ + P     + L+ G         A ELF  M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
            S+G + +V+ Y+ +I   C+ K++  A  + + M + G   ++V YN L  GL +  +V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             A  +  ++    +  D   Y T + GLCK       +E+   +  L++     A + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ++GL K G+++ A  L + +    +  ++  YN +I +LC   K  +A  LF  M
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 53/210 (25%)

Query: 195 GCKHNVFSYSILING--------------------------------------------- 209
           G  H+  S+ ILI+                                              
Sbjct: 99  GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158

Query: 210 -------YCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
                  Y +++ +   + ++  M++K  + P+V   + L  GL +      A +LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              G+  D + Y   I  LC+   +  A E+   +     +++I  YN LIDGLCK  ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALC 351
             A  + + L    L  DVVTY  +++ LC
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 185/348 (53%), Gaps = 6/348 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V T   LI+  C+      A+ LF EM  G G     CKP+ VTY  +I G CKEG
Sbjct: 202 CYPDVVTCTVLIDATCKESGVGQAMKLFNEM-RGKG-----CKPDVVTYNVLIKGFCKEG 255

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A     K+       +V+++N ++   C    W +A  L   M+ +G  P+VV+FN
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++N LC+ G + +A  +LE+M + G  PN+  +N L+ GFC    ++RA E    M S 
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSR 375

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+IL+   CK+ +++ A+ + S++ SKG  P ++ YNT+  GL ++ + E A
Sbjct: 376 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 435

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L +EM   G+  D     + + GL + G + EA++ F  L+    + +   YN ++ G
Sbjct: 436 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMG 495

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LCK+ +  +A +    +          +Y  +I  +  +G  ++A  L
Sbjct: 496 LCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKL 543



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 167/344 (48%), Gaps = 11/344 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++R  GC+P+V TYN LI G C+ G    A+   +++ +    +G  C+ + +
Sbjct: 224 QAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPS----YG--CQSDVI 277

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++  I+  LC  G    A +L   M  +   P+VVT+N LI+  C      +A  +   M
Sbjct: 278 SHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMM 337

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN  SFN ++   C    +D A   LE+M+  G  P+   YN L+   C  G+V
Sbjct: 338 PKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKV 397

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   + S GC  ++ SY+ +I+G  K  + E A+ L  EM  KG+KPD++   ++
Sbjct: 398 DDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSV 457

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +V  A K F  ++  G+  + + Y + + GLCK      A++    +     
Sbjct: 458 VGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGC 517

Query: 302 ELDIRAYNCLIDGLCKSG----RLKIAWELF-RSLPRGVLIADV 340
           +    +Y  LI G+   G      K++ EL+ R L +  LI  V
Sbjct: 518 KPTEASYTTLIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKV 561



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 152/313 (48%), Gaps = 5/313 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V  T +I   CK G    A  +   +++     +  +YN LI+ +C + +  EA   
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEIEEA--- 158

Query: 118 FIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            + ++D   V PN  +++ ++  LC  GK+ +A ++L+  +Q    P+      L+D  C
Sbjct: 159 -LRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATC 217

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
               V +A +LF  M   GCK +V +Y++LI G+CK   ++ A+    ++ S G + DV+
Sbjct: 218 KESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVI 277

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N +   L    +   A KL   M R G       +   I+ LC+ G + +A+ +   +
Sbjct: 278 SHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMM 337

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               +  + R++N LI G C    +  A E    +       D+VTYNI++ ALC DGK+
Sbjct: 338 PKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKV 397

Query: 357 DKARDLFLDMEAK 369
           D A  +   + +K
Sbjct: 398 DDAVVILSQLSSK 410



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 160/350 (45%), Gaps = 9/350 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V     LI   C+ G T  A  +   +     E G V   N+  Y  +I+  CK G +
Sbjct: 102 PDVVACTALIREFCKIGRTKNATRIMGILE----ESGAVIDANS--YNVLINAYCKSGEI 155

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A  +   +   ++ PN  TY++++   C      +A  +    +     P+VV+  V+
Sbjct: 156 EEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVL 212

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK   + +A +L   M   G +P+   YN L+ GFC  GR++ A      + S GC
Sbjct: 213 IDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGC 272

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +V S+++++   C       A+ L + ML KG  P VV +N L   L +   + +A  
Sbjct: 273 QSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALN 332

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           + + M +HG   ++ ++   I G C    I  A+E    +       DI  YN L+  LC
Sbjct: 333 VLEMMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALC 392

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K G++  A  +   L        +++YN +I  L   GK + A +L  +M
Sbjct: 393 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEM 442



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 138/278 (49%), Gaps = 6/278 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   GC P+V T+N LIN LC+ G    ALN+ E M   +G       PN+
Sbjct: 293 MDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPK-HGH-----TPNS 346

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            ++  +I G C    +D+A E    M      P++VTYN L+   C     ++A  +  +
Sbjct: 347 RSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 406

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P+++S+N +++ L K GK + A  LLE M   G++P+     +++ G    G+
Sbjct: 407 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 466

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A + F  ++  G K N F Y+ ++ G CK ++   A+    +M++ G KP    Y T
Sbjct: 467 VHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTT 526

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           L  G+      E A KL +E+   G+   +   +   D
Sbjct: 527 LIKGITYEGLAEEASKLSNELYSRGLVKKSLIVKVSQD 564



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 139/292 (47%), Gaps = 7/292 (2%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCY--ANDWNEAKCLFIE-MMDQGVQPNVVSFNVIM 137
           E F K     +N ++    S IH  C    N   E    F+E M ++G  P+VV+   ++
Sbjct: 52  ERFSKGALNGVNTSLNFEESEIHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALI 111

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
            E CK G+   A+R++ ++ + G   +A  YN L++ +C +G +   EE    ++     
Sbjct: 112 REFCKIGRTKNATRIMGILEESGAVIDANSYNVLINAYCKSGEI---EEALRVLDHTSVA 168

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  +Y  ++   C   +++ A+ +    L     PDVV    L     +   V +A KL
Sbjct: 169 PNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKL 228

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F+EM+  G   D   Y   I G CK G + EA+   + L     + D+ ++N ++  LC 
Sbjct: 229 FNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCS 288

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            GR   A +L  ++ R      VVT+NI+I+ LC  G + KA ++ L+M  K
Sbjct: 289 GGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNV-LEMMPK 339


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 191/365 (52%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F ++   G  PN F+Y TLI+ L + G+   A  L   M      F VV      
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV------ 193

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++DGL K G  + A+++F  + +E++ PN VTY++LI G C   D N+ + L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNV+ ++ I++   K G ++EA  ++  M+Q  + PN FVY TL+DG+    + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M+S G + N F     +N   ++  +E A  L+ +M+S+G+ PD V Y ++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+  +   AF +  EM       D  AY   I+GL K G   E+      +R L  
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +N +I+  CK G L  A +L   +    L  + +T NI++  LCA G+++K  D
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 362 LFLDM 366
           L  DM
Sbjct: 493 LLNDM 497



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 190/388 (48%), Gaps = 41/388 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   ++  G  P++ TYNTL+NG C+ G    A  L  E++  N E      PN +T
Sbjct: 36  AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLE------PNVIT 89

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT+ID  CK   ++ A  ++ +M  +++ P+VVTY  +++G C +    EAK +F EM 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME 149

Query: 123 DQGVQPN-----------------------------------VVSFNVIMNELCKNGKMD 147
           + GV PN                                   VV +  +M+ L K G  +
Sbjct: 150 EVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMAN 209

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
            A  + +++++  + PN   Y+ L+DG C  G VN+ E L   ME      NV  YS ++
Sbjct: 210 NAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +GY K   +  A+ +  +M+ + I P+V +Y TL  G F+  Q   A  LF EM+  G+ 
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            + +   +F++ L ++G + EA ELF+ +       D   Y  ++DG  K+G+   A+ +
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGK 355
            + +       DVV YN++I+ L   GK
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGK 417



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V  +N LI+G CR G    A+ L E M            P+ VTY T+++G CK G + 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGP------APDIVTYNTLMNGFCKIGDLF 69

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            AK+L  ++   N+ PNV+TY +LI  +C +    +A  ++ EM  + + P+VV++  IM
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK+GK++EA  +   M ++GV PN F Y TL+D     G V  A  L   M   G  
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +V  Y+ L++G  K      A  ++  +L + + P+ V Y+ L  G  ++  V +   L
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+   +  +   Y + +DG  K G + EA+++ R +       ++  Y  LIDG  K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +  IA +LF+ +    L  +    +  ++ L   G+M++A +LF DM ++
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361



 Score =  160 bits (406), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 185/399 (46%), Gaps = 31/399 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA  LF  +   G  P+   Y ++++G  + G    A N+ +EM   +  F VV      
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 57  -----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                   P++ T+ T+I+  CKEG +  A +L  +MK   + P
Sbjct: 410 NGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N +T N L+   C A +  +   L  +M+  G  P   +   +++   K+ + D    + 
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMH 529

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + ++ +GV+ +   YNTL+  FC  G + RA  +F  M   G   ++ +Y+ LI+GYC +
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS 589

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             ++ A +++S+ML++G+ P+V  YN L  GL     ++ A  L ++M+  G+  +   Y
Sbjct: 590 SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTY 649

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              + G  K G + E V+L+  +    +    R YN LI    K  ++  A EL + +  
Sbjct: 650 DILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV 709

Query: 334 GVLIADVVTYNIMI---HALCADGKMDKARDLFLDMEAK 369
             +  +  TY+I+I   + L    +++K+       EAK
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 137/244 (56%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ +V  FNV+++  C+NG++  A  LLE M   G  P+   YNTLM+GFC  G +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   +  +  + NV +Y+ LI+ YCK++ +E AL +Y EM  K + PDVV Y  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +     D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  L+DGL K+G    A ++F+ L    L+ + VTY+ +I   C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 366 MEAK 369
           ME K
Sbjct: 253 MEEK 256



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 135/276 (48%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I  +V  +N LI G+C   + + A  L   M  +G  P++V++N +MN  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +L+  +  + + PN   Y TL+D +C +  +  A  ++  M       +V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK+ ++E A S++ EM   G+ P+   Y TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   +DGL K G    A ++F+ L       +   Y+ LIDG CK G +     L + 
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +  +V+ Y+ ++      G +++A D+   M
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+  ++   G  PNV TYN L+ GL        A  L  +M     E G+V  PN  
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK----ERGLV--PNAT 647

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G  K G + +  +L+ +M  +   P   TYN LI  F      ++AK L  EM
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707

Query: 122 MDQGVQPNVVSFNVI------------MNELCKNGKMDEASRLLELMIQIGVRP 163
             +G+ PN  +++++            +N+  K     EA RL E M + G  P
Sbjct: 708 QVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/173 (31%), Positives = 80/173 (46%), Gaps = 18/173 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  +++  G  PN  TY+ L++G  + G+    + L+ EM       G V  P T 
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE-------- 113
           TY  +I    K   + +AKEL  +M+   I PN  TY+ LI G+   +   E        
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 114 ----AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
               AK LF EM ++G  P   +   I   L K GK  +A R+L  + +  V+
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKVK 795


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 198/368 (53%), Gaps = 7/368 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +  K+      PNVFTY  L+NGLCR+  T +A  +F+EM   NG     CKPN 
Sbjct: 105 MDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR-NG-----CKPNP 158

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+I  L + G +D+A  + ++ +   +  +V+T  +++ G C A+  ++A     E
Sbjct: 159 ITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEE 218

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL-MIQIGVRPNAFVYNTLMDGFCLTG 179
           M   GV+PN V+++ +++   ++G++D   R  E    + G    A  Y   +D  C  G
Sbjct: 219 MRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAG 278

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            ++RA +    +   G   +V +YS+LIN + +  + + +L L  +M   G+KPDVV Y+
Sbjct: 279 YLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYS 338

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL   L +  + + AF+L + M+  G   +   Y + +DGLCK+G + E   ++  +   
Sbjct: 339 TLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKS 398

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +   D+  Y+ +++GL K+G L  A +LF  +       D   Y+++I +LC  GK+++A
Sbjct: 399 RCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458

Query: 360 RDLFLDME 367
             ++  ME
Sbjct: 459 CGMYHGME 466



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 159/309 (51%), Gaps = 2/309 (0%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  ++DGLC  G  ++A EL  ++      P +  YN +I G C A+   +A  +  +
Sbjct: 55  TTYKLVVDGLCGAGMANQALELVRELSG-VYTPTLFIYNGIITGLCRASRVMDAYKVLEK 113

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++ + PNV ++ +++N LC++ K   A  + + M + G +PN   Y TL+      G 
Sbjct: 114 MVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGE 173

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  + +   S+    +V + + ++ G CK   ++ AL    EM   G++P+ V Y+ 
Sbjct: 174 IDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSN 233

Query: 241 LFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L  G  +  +++R  + F+E + R G + +  AY  ++D LCK GY+  A +    LR  
Sbjct: 234 LVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQS 293

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+  Y+ LI+   ++G+   + EL   + R  +  DVVTY+ +I+ LC + K   A
Sbjct: 294 GVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDA 353

Query: 360 RDLFLDMEA 368
             L   MEA
Sbjct: 354 FRLLELMEA 362



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 125/256 (48%), Gaps = 1/256 (0%)

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           AK L   +++ GV+ +  +F ++  +L +  K  E  RL  L+   GV      Y  ++D
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C  G  N+A EL   +  +     +F Y+ +I G C+   +  A  +  +M+ + I P
Sbjct: 63  GLCGAGMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVP 121

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +V  Y  L  GL   ++ + A ++F EM+R+G   +   Y T I  L + G I EA+ + 
Sbjct: 122 NVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVM 181

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
              R L+   D+     ++ GLCK+ RL  A +    + +  +  + VTY+ ++H     
Sbjct: 182 IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQH 241

Query: 354 GKMDKARDLFLDMEAK 369
           G++D+    F + +A+
Sbjct: 242 GELDRVIRFFEEEKAR 257


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/350 (34%), Positives = 182/350 (52%), Gaps = 9/350 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A++ K+ V GC PNV+T+ +L+ G    G  + ALN++  MA    E      PN V 
Sbjct: 303 ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFE------PNVVA 356

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I GLC  G + +A  +  KM+    +PNV TY +LI GF  A D   A  ++ +MM
Sbjct: 357 YNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMM 416

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PNVV +  ++N LC++    +A  L+E M      PN   +NT + G C +GRV 
Sbjct: 417 TNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVE 476

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  ME  GC  N+ +Y+ +++G  K   I+ AL L +EM  KG++ ++V YNT+F
Sbjct: 477 CAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIF 536

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-LKY 301
            G   + + E A KL  +M   GV  D   Y T     C  G +  A++L   L    K+
Sbjct: 537 GGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKW 596

Query: 302 ELDIRAYNCLIDGLCKS-GRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
             ++ AY  L+ G+C   G  +    L + L  G+ + +  T+N ++  L
Sbjct: 597 VPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICL-NAATWNALVRGL 645



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 181/353 (51%), Gaps = 6/353 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PNV  YN LING CR         L  +M     E G+   PN +TY+T+I  L   G 
Sbjct: 246 QPNVSVYNALINGFCREYKVKEVFLLLGQMV----EKGI--DPNVITYSTVISSLSGIGN 299

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V+ A  ++ KM     +PNV T+ SL+ G+       EA  ++  M ++G +PNVV++N 
Sbjct: 300 VELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNT 359

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC +GKM EA  +   M + G  PN   Y  L+DGF   G +  A E++  M + G
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  NV  Y+ ++N  C++     A SL  +M +    P+ V +NT   GL    +VE A 
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAI 479

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF +M+++G + +   Y   +DGL K   I EA+EL   +     EL++  YN +  G 
Sbjct: 480 NLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGF 539

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           C  G+ + A +L   +  G +  D +TYN + +A C  GK+  A  L   + A
Sbjct: 540 CNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSA 592



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 193/392 (49%), Gaps = 36/392 (9%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            ++  ++  G EPNV+TYN L+  LC+      A  L  EM+N        C+P+ V+YT
Sbjct: 170 PIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKG------CEPDVVSYT 223

Query: 65  TIIDGLCKEGFVDKAKELFLK------------------------------MKDENINPN 94
           T+I  + K G V++A+EL ++                              M ++ I+PN
Sbjct: 224 TVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPN 283

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           V+TY+++I       +   A  ++ +M  +G  PNV +F  +M      G++ EA  +  
Sbjct: 284 VITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWN 343

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M + G  PN   YNTL+ G C  G++  A  +   ME  GC  NV +Y  LI+G+ K  
Sbjct: 344 RMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAG 403

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           ++ GA  ++++M++ G  P+VV+Y ++   L       +A+ L ++M       +T  + 
Sbjct: 404 DLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFN 463

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           TFI GLC +G +  A+ LF  +       +I+ YN ++DGL K  R+K A EL   +   
Sbjct: 464 TFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEK 523

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +  ++VTYN +    C  GK ++A  L   M
Sbjct: 524 GMELNLVTYNTIFGGFCNVGKFEEALKLLGKM 555



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 103/353 (29%), Positives = 178/353 (50%), Gaps = 8/353 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV TY+T+I+ L   G+  +AL ++ +M      F   C PN  T+T+++ G    
Sbjct: 279 GIDPNVITYSTVISSLSGIGNVELALAVWAKM------FVRGCSPNVYTFTSLMKGYFMR 332

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  ++ +M +E   PNVV YN+LIHG C      EA  +  +M   G  PNV ++
Sbjct: 333 GRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTY 392

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++   K G +  AS +   M+  G  PN  VY ++++  C +   ++A  L   M +
Sbjct: 393 GALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMST 452

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C  N  +++  I G C +  +E A++L+ +M   G  P++  YN +  GL + ++++ 
Sbjct: 453 DNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKE 512

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L  EM+  G+  +   Y T   G C  G   EA++L   + +   + D   YN L  
Sbjct: 513 ALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTY 572

Query: 314 GLCKSGRLKIAWELFRSLPR-GVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             C  G++K A +L   L   G  + +V  Y  ++  +C    +++A  L+LD
Sbjct: 573 AYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAV-LYLD 624



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 162/319 (50%), Gaps = 7/319 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  ++ ++   G EPNV  YNTLI+GLC  G    A+++  +M   NG     C PN 
Sbjct: 336 LEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMER-NG-----CSPNV 389

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +IDG  K G +  A E++ KM      PNVV Y S+++  C ++ +++A  L  +
Sbjct: 390 STYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK 449

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      PN V+FN  +  LC +G+++ A  L   M Q G  PN   YN ++DG     R
Sbjct: 450 MSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENR 509

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A EL   ME  G + N+ +Y+ +  G+C   + E AL L  +ML  G+KPD + YNT
Sbjct: 510 IKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNT 569

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGV-AADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L        +V+ A +L D++   G    +  AY + + G+C    + EAV     +   
Sbjct: 570 LTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNE 629

Query: 300 KYELDIRAYNCLIDGLCKS 318
              L+   +N L+ GL  S
Sbjct: 630 GICLNAATWNALVRGLFNS 648



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 157/314 (50%), Gaps = 7/314 (2%)

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           G+ C  +   +  +I+   + G  ++A ++F ++++    P V  YN L+      N + 
Sbjct: 109 GISCSEDL--FINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQ 166

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
             + ++  M   G +PNV ++N+++  LCKN ++D A +LL  M   G  P+   Y T++
Sbjct: 167 MIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVI 226

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                 G+V  A EL +  +      NV  Y+ LING+C+  +++    L  +M+ KGI 
Sbjct: 227 SSMSKLGKVEEARELSIRFQP-----NVSVYNALINGFCREYKVKEVFLLLGQMVEKGID 281

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P+V+ Y+T+   L  I  VE A  ++ +M   G + + + + + + G    G ++EA+ +
Sbjct: 282 PNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNI 341

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           +  +    +E ++ AYN LI GLC  G++  A  +   + R     +V TY  +I     
Sbjct: 342 WNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK 401

Query: 353 DGKMDKARDLFLDM 366
            G +  A +++  M
Sbjct: 402 AGDLVGASEIWNKM 415



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 119/230 (51%), Gaps = 7/230 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  K+    C PN  T+NT I GLC +G    A+NLF +M     ++G  C PN  
Sbjct: 442 QAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQME----QYG--CSPNIK 495

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++DGL KE  + +A EL  +M+++ +  N+VTYN++  GFC    + EA  L  +M
Sbjct: 496 TYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKM 555

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR-PNAFVYNTLMDGFCLTGR 180
           +  GV+P+ +++N +    C  GK+  A +LL+ +   G   P    Y +L+ G C    
Sbjct: 556 LVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIG 615

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           V  A      M + G   N  +++ L+ G   +    G + +  ++L+ G
Sbjct: 616 VEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDILTSG 665



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 134/302 (44%), Gaps = 30/302 (9%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +TY  +I       D +  + L  +M  +G+  +   F  ++N   + G  ++A ++   
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           + + G +P   +YN L+D      R    E ++ +M+  G + NV++Y+IL+   CKN  
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNR 199

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA--------------------- 254
           ++GA  L  EM +KG +PDVV Y T+   + ++ +VE A                     
Sbjct: 200 VDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGF 259

Query: 255 ---------FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                    F L  +M   G+  +   Y T I  L   G +  A+ ++  + +     ++
Sbjct: 260 CREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNV 319

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             +  L+ G    GR+  A  ++  +       +VV YN +IH LC+ GKM +A  +   
Sbjct: 320 YTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSK 379

Query: 366 ME 367
           ME
Sbjct: 380 ME 381



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 67/142 (47%)

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           SK  +   + Y  +   L     V+    L  +M+  G++     +   I+   + G   
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A+++F  +R    +  ++ YN L+D +    R ++   ++ ++ R     +V TYNI++
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 348 HALCADGKMDKARDLFLDMEAK 369
            ALC + ++D A  L ++M  K
Sbjct: 192 KALCKNNRVDGACKLLVEMSNK 213


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 191/365 (52%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F ++   G  PN F+Y TLI+ L + G+   A  L   M      F VV      
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV------ 193

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++DGL K G  + A+++F  + +E++ PN VTY++LI G C   D N+ + L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNV+ ++ I++   K G ++EA  ++  M+Q  + PN FVY TL+DG+    + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M+S G + N F     +N   ++  +E A  L+ +M+S+G+ PD V Y ++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+  +   AF +  EM       D  AY   I+GL K G   E+      +R L  
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +N +I+  CK G L  A +L   +    L  + +T NI++  LCA G+++K  D
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 362 LFLDM 366
           L  DM
Sbjct: 493 LLNDM 497



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 191/390 (48%), Gaps = 41/390 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   ++  G  P++ TYNTL+NG C+ G    A  L  E++  N E      PN +T
Sbjct: 36  AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLE------PNVIT 89

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT+ID  CK   ++ A  ++ +M  +++ P+VVTY  +++G C +    EAK +F EM 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME 149

Query: 123 DQGVQPN-----------------------------------VVSFNVIMNELCKNGKMD 147
           + GV PN                                   VV +  +M+ L K G  +
Sbjct: 150 EVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMAN 209

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
            A  + +++++  + PN   Y+ L+DG C  G VN+ E L   ME      NV  YS ++
Sbjct: 210 NAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +GY K   +  A+ +  +M+ + I P+V +Y TL  G F+  Q   A  LF EM+  G+ 
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            + +   +F++ L ++G + EA ELF+ +       D   Y  ++DG  K+G+   A+ +
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            + +       DVV YN++I+ L   GK +
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKYE 419



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V  +N LI+G CR G    A+ L E M            P+ VTY T+++G CK G + 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGP------APDIVTYNTLMNGFCKIGDLF 69

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            AK+L  ++   N+ PNV+TY +LI  +C +    +A  ++ EM  + + P+VV++  IM
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK+GK++EA  +   M ++GV PN F Y TL+D     G V  A  L   M   G  
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +V  Y+ L++G  K      A  ++  +L + + P+ V Y+ L  G  ++  V +   L
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+   +  +   Y + +DG  K G + EA+++ R +       ++  Y  LIDG  K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +  IA +LF+ +    L  +    +  ++ L   G+M++A +LF DM ++
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 184/399 (46%), Gaps = 31/399 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA  LF  +   G  P+   Y ++++G  + G    A N+ +EM   +  F VV      
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 57  -----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                   P++ T+ T+I+  CKEG +  A +L  +MK   + P
Sbjct: 410 NGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N +T N L+   C A +  +   L  +M+  G  P   +   +++   K+ + D      
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXH 529

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + ++ +GV+ +   YNTL+  FC  G + RA  +F  M   G   ++ +Y+ LI+GYC +
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS 589

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             ++ A +++S+ML++G+ P+V  YN L  GL     ++ A  L ++M+  G+  +   Y
Sbjct: 590 SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTY 649

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              + G  K G + E V+L+  +    +    R YN LI    K  ++  A EL + +  
Sbjct: 650 DILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV 709

Query: 334 GVLIADVVTYNIMI---HALCADGKMDKARDLFLDMEAK 369
             +  +  TY+I+I   + L    +++K+       EAK
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748



 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 137/244 (56%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ +V  FNV+++  C+NG++  A  LLE M   G  P+   YNTLM+GFC  G +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   +  +  + NV +Y+ LI+ YCK++ +E AL +Y EM  K + PDVV Y  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +     D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  L+DGL K+G    A ++F+ L    L+ + VTY+ +I   C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 366 MEAK 369
           ME K
Sbjct: 253 MEEK 256



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 135/276 (48%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I  +V  +N LI G+C   + + A  L   M  +G  P++V++N +MN  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +L+  +  + + PN   Y TL+D +C +  +  A  ++  M       +V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK+ ++E A S++ EM   G+ P+   Y TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   +DGL K G    A ++F+ L       +   Y+ LIDG CK G +     L + 
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +  +V+ Y+ ++      G +++A D+   M
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+  ++   G  PNV TYN L+ GL        A  L  +M     E G+V  PN  
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK----ERGLV--PNAT 647

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G  K G + +  +L+ +M  +   P   TYN LI  F      ++AK L  EM
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707

Query: 122 MDQGVQPNVVSFNVI------------MNELCKNGKMDEASRLLELMIQIGVRP 163
             +G+ PN  +++++            +N+  K     EA RL E M + G  P
Sbjct: 708 QVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  +++  G  PN  TY+ L++G  + G+    + L+ EM       G V  P T 
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE-------- 113
           TY  +I    K   + +AKEL  +M+   I PN  TY+ LI G+   +   E        
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 114 ----AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
               AK LF EM ++G  P   +   I   L K GK  +A R+L
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786


>gi|15224671|ref|NP_180698.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
 gi|75206083|sp|Q9SIC9.1|PP178_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g31400, chloroplastic; Flags: Precursor
 gi|4589961|gb|AAD26479.1| unknown protein [Arabidopsis thaliana]
 gi|330253448|gb|AEC08542.1| genomes uncoupled 1 protein [Arabidopsis thaliana]
          Length = 918

 Score =  197 bits (500), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 117/344 (34%), Positives = 182/344 (52%), Gaps = 7/344 (2%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF-VD 77
           V+ ++ LI+   R+G    A+++F  M     E+G+  +PN VTY  +ID   K G    
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMK----EYGL--RPNLVTYNAVIDACGKGGMEFK 321

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +  + F +M+   + P+ +T+NSL+        W  A+ LF EM ++ ++ +V S+N ++
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + +CK G+MD A  +L  M    + PN   Y+T++DGF   GR + A  LF  M  +G  
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  SY+ L++ Y K    E AL +  EM S GIK DVV YN L  G  +  + +   K+
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F EM+R  V  +   Y T IDG  K G   EA+E+FR  +      D+  Y+ LID LCK
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +G +  A  L   + +  +  +VVTYN +I A      MD++ D
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 157/290 (54%), Gaps = 6/290 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           + A  F +++  G +P+  T+N+L+    R G    A NLF+EM N   E  V       
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDV------F 375

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T++D +CK G +D A E+  +M  + I PNVV+Y+++I GF  A  ++EA  LF EM
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  + VS+N +++   K G+ +EA  +L  M  +G++ +   YN L+ G+   G+ 
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  +++F  M+      N+ +YS LI+GY K    + A+ ++ E  S G++ DVV+Y+ L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
              L +   V  A  L DEM + G++ +   Y + ID   ++  +  + +
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 162/320 (50%), Gaps = 5/320 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F  ++ +G  PN+ TYN +I+   + G     +  F +    NG      +P+ +
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG-----VQPDRI 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ +++    + G  + A+ LF +M +  I  +V +YN+L+   C     + A  +  +M
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PNVVS++ +++   K G+ DEA  L   M  +G+  +   YNTL+  +   GR 
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M S+G K +V +Y+ L+ GY K  + +    +++EM  + + P+++ Y+TL
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    + A ++F E +  G+ AD   Y   ID LCKNG +  AV L   +     
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580

Query: 302 ELDIRAYNCLIDGLCKSGRL 321
             ++  YN +ID   +S  +
Sbjct: 581 SPNVVTYNSIIDAFGRSATM 600



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 36/339 (10%)

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           + +I  L + G V  AK +F           V  +++LI  +  +    EA  +F  M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 124 QGVQPNVVSFNVIMNELCKNG-KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            G++PN+V++N +++   K G +  + ++  + M + GV+P+   +N+L+      G   
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  M +   + +VFSY+ L++  CK  +++ A  + ++M  K I P+VV Y+T+ 
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  + + A  LF EM+  G+A D  +Y T +    K G   EA+++ R +  +  +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476

Query: 303 LDIRAYNC-----------------------------------LIDGLCKSGRLKIAWEL 327
            D+  YN                                    LIDG  K G  K A E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           FR      L ADVV Y+ +I ALC +G +  A  L  +M
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 44/240 (18%)

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPN--AFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           I+ EL    + D+A    E  ++   R N    + + ++      G+V  A+ +F +  +
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF----IGLFEIH 249
            G  + V+++S LI+ Y ++   E A+S+++ M   G++P++V YN +      G  E  
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           QV    K FDEMQR+GV  D   + + +  +C  G + EA                    
Sbjct: 322 QVA---KFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEA-------------------- 357

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                         A  LF  +    +  DV +YN ++ A+C  G+MD A ++   M  K
Sbjct: 358 --------------ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 27/174 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F + +  G   +V  Y+ LI+ LC+ G    A++L +EM            PN V
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG------ISPNVV 585

Query: 62  TYTTIIDGLCKEGFVDKAKEL----FLKMKDENINPNVVTY-NSLIHGF----CYANDWN 112
           TY +IID   +   +D++ +      L      ++    T  N +I  F      +N+  
Sbjct: 586 TYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRT 645

Query: 113 EAKC------------LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
              C            +F +M    ++PNVV+F+ I+N   +    ++AS LLE
Sbjct: 646 TKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 192/368 (52%), Gaps = 7/368 (1%)

Query: 3   AAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           A  LF+++ R +G   + ++Y  LI GLC  G    A  +F +M+ G       C+P   
Sbjct: 144 ACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRG------WCRPGVH 197

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGLCK   V +A+ L  +M ++ + PNVVTYN+LI G C    +++   L  +M
Sbjct: 198 TYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKM 257

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q   P+  ++  +++ LCK+GK+   +++L   I  GV      YN L++G+C  G +
Sbjct: 258 EIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDM 317

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M+       V +++ +I+G+C   ++  A++  ++M   G+ P+ V +N+L
Sbjct: 318 KAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   + + + A +L D M+ +GV  D   Y  FID LC  G + EA  LF  L +   
Sbjct: 378 ISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGI 437

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     Y  L+ G C+ G +  A+ L   +     + DV TYN +I  LC   ++D+A D
Sbjct: 438 KAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAID 497

Query: 362 LFLDMEAK 369
           L   M+ +
Sbjct: 498 LLDKMKKQ 505



 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 175/362 (48%), Gaps = 5/362 (1%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           +++R  G  P+ FTYN L+ GLCR G    A  LF +M    G     C  +  +YT +I
Sbjct: 114 VRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWG----ACY-DRYSYTILI 168

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GLC  G +D A  +F KM      P V TY  L+ G C      EA+ L  EM+++GV 
Sbjct: 169 KGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVV 228

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PNVV++N ++  LC+ G+ D+ ++LLE M      P+ + Y  ++ G C  G+V    ++
Sbjct: 229 PNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKV 288

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
                  G    V +Y+ LINGYCK  +++ AL +   M    + P V  +N +  G   
Sbjct: 289 LHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCC 348

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             +V +A     +M   G++ +T  + + I G C  G    A+ L   +       D + 
Sbjct: 349 GGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQT 408

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y   ID LC  G+L+ A  LF  LP   + A  V Y  ++H  C  G +D A  L   M 
Sbjct: 409 YAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMA 468

Query: 368 AK 369
           ++
Sbjct: 469 SE 470



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/365 (32%), Positives = 173/365 (47%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F K+    C P V TY  L++GLC+      A  L  EM N     GVV  PN V
Sbjct: 179 DACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNK----GVV--PNVV 232

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLC+EG  D   +L  KM+ +  +P+  TY  ++HG C          +  E 
Sbjct: 233 TYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEA 292

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +GV   V+++N ++N  CK G M  A  +L+LM +  V P    +N ++ GFC  G+V
Sbjct: 293 IGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKV 352

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A      M   G   N  +++ LI+G C   E + AL L   M   G+ PD   Y   
Sbjct: 353 HKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIF 412

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  Q+E A  LF  +   G+ A    Y + + G C+ G I  A  L   +     
Sbjct: 413 IDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENC 472

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN LIDGLCK  RL  A +L   + +  +     T+NI+I  +  D K   A  
Sbjct: 473 MPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAK 532

Query: 362 LFLDM 366
           ++  M
Sbjct: 533 MYEQM 537



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 151/323 (46%), Gaps = 5/323 (1%)

Query: 50  GEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
             FG + K    PN  TY T+I+  CK   +  A+   ++M++  + P+  TYN L+ G 
Sbjct: 76  ASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGL 135

Query: 106 CYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           C A     A  LF++M  + G   +  S+ +++  LC  G++D+A R+   M +   RP 
Sbjct: 136 CRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPG 195

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              Y  L+DG C   RV  AE L   M + G   NV +Y+ LI G C+    +    L  
Sbjct: 196 VHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLE 255

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M  +   PD   Y  +  GL +  +V    K+  E    GVA +   Y   I+G CK G
Sbjct: 256 KMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGG 315

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +  A+++ + ++  +    ++ +N +I G C  G++  A      +    L  + VT+N
Sbjct: 316 DMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFN 375

Query: 345 IMIHALCADGKMDKARDLFLDME 367
            +I   C+ G+   A  L   ME
Sbjct: 376 SLISGQCSVGERKIALRLLDLME 398



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 100/401 (24%), Positives = 160/401 (39%), Gaps = 57/401 (14%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDK 78
           V TYN LING C+ G    AL++ + M            P   T+  +I G C  G V K
Sbjct: 301 VLTYNALINGYCKGGDMKAALDVLQLMKRNR------VNPGVQTFNEVIHGFCCGGKVHK 354

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A     +M    ++PN VT+NSLI G C   +   A  L   M + GV P+  ++ + ++
Sbjct: 355 AMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFID 414

Query: 139 ELCKNGKMDEASRLLELMIQIGVR-----------------------------------P 163
            LC  G+++EA  L   +   G++                                   P
Sbjct: 415 ALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMP 474

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           +   YNTL+DG C   R++RA +L   M+  G +    +++ILI     +K+   A  +Y
Sbjct: 475 DVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMY 534

Query: 224 SEMLSKGIKPDVVIYN-TLFIGLFEIHQVERAFKL-FDEMQRHGVAADTWAYRTFIDGLC 281
            +M+S G KPD   Y   +    FE    E    +   EM   GV  D   Y   I    
Sbjct: 535 EQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYV 594

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC--------------KSGRLKIAWEL 327
             G   +A      +  +  + D   Y+ L++ +C              K   ++   EL
Sbjct: 595 DAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQEL 654

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           F  +        + TY  ++  LC   ++++   L L M+ 
Sbjct: 655 FEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQG 695



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 97/397 (24%), Positives = 165/397 (41%), Gaps = 57/397 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF  L + G + +   Y +L++G C+ G    A  L E+MA+ N      C P+  
Sbjct: 424 EAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASEN------CMPDVH 477

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDGLCK   +D+A +L  KMK + I P   T+N LI    +     +A  ++ +M
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL--MIQIGVRPNAFVYNTLMDGFCLTG 179
           +  G +P+  ++ + ++     G   E +  + +  M + GV P+   YN ++  +   G
Sbjct: 538 ISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAG 597

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYC--------------KNKEIEGALSLYSE 225
              +A    V M S+    +  +YSIL+N  C              K  ++     L+ +
Sbjct: 598 LKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKMVDVRNLQELFEQ 657

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD---------------- 269
           M      P +  Y  L  GL    ++E    L  +MQ + +  D                
Sbjct: 658 MCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCYCNLEM 717

Query: 270 ---------TWAYRTF----------IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
                    + A+++F          + GLC +G    AV +F  +  L Y  D   +  
Sbjct: 718 YREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKL 777

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           LID L + G      E+   +     +A   TY  ++
Sbjct: 778 LIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLV 814


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 100/308 (32%), Positives = 166/308 (53%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C P+ +TY  +++G+C+EG VD A E    +      PN V+YN ++ G   A  W +A+
Sbjct: 12  CAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAE 71

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  EM  +G  PNVV+FN++++ LC+ G ++ A  +LE + + G  PN+  YN L+  F
Sbjct: 72  KLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAF 131

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   ++++A      M S GC  ++ SY+ L+   C+N E++ A+ L  ++  KG  P +
Sbjct: 132 CKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVL 191

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + YNT+  GL +  + + A +L DEM   G+  D   Y T   GLC+   I EA+  F  
Sbjct: 192 ISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCK 251

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++ +     +  YN ++ GLCK      A +LF  +     + +  TY I++  L  +G 
Sbjct: 252 VQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEGL 311

Query: 356 MDKARDLF 363
           + +ARDL 
Sbjct: 312 VKEARDLL 319



 Score =  184 bits (466), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 172/332 (51%), Gaps = 7/332 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++R  GC P++ TYN ++NG+C+ G    A+   E + +  GE      PNTV+Y  
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGE------PNTVSYNI 56

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GL      + A++L  +M  +   PNVVT+N LI   C       A  +  ++   G
Sbjct: 57  VLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYG 116

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             PN +S+N +++  CK  KMD+A   +ELM+  G  P+   YNTL+   C  G V+ A 
Sbjct: 117 CTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAI 176

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   ++  GC   + SY+ +I+G  K  + + AL L  EM+SKG++PD++ Y T+  GL
Sbjct: 177 DLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGL 236

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               ++E A + F ++Q  G+      Y   + GLCK      A++LF  +       + 
Sbjct: 237 CREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNE 296

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             Y  L++GL   G +K A +L   L  RGV+
Sbjct: 297 STYTILVEGLAYEGLVKEARDLLGQLCSRGVV 328



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 145/283 (51%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +L  +M+D+   P+++TYN +++G C     ++A      +   G +PN VS+N+++  L
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
               + ++A +L+E M   G  PN   +N L+   C  G V  A E+   +   GC  N 
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            SY+ L++ +CK K+++ A++    M+S+G  PD+V YNTL   L    +V+ A  L  +
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           ++  G +    +Y T IDGL K G   EA+EL   +     + DI  Y  +  GLC+  +
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++ A   F  +    +   VV YN ++  LC   +   A DLF
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLF 284



 Score =  147 bits (372), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 6/265 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   GC PNV T+N LI+ LCR G    A+ + E++     ++G  C PN++
Sbjct: 69  DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIP----KYG--CTPNSL 122

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++   CK+  +DKA      M      P++V+YN+L+   C   + + A  L  ++
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P ++S+N +++ L K GK  EA  LL+ MI  G++P+   Y T+  G C   ++
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A   F  ++ MG +  V  Y+ ++ G CK +E   A+ L+S M+S G  P+   Y  L
Sbjct: 243 EEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTIL 302

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGV 266
             GL     V+ A  L  ++   GV
Sbjct: 303 VEGLAYEGLVKEARDLLGQLCSRGV 327



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 132/251 (52%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM D+G  P+++++NV++N +C+ G++D+A   LE +   G  PN   YN ++ G  
Sbjct: 3   LLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLF 62

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R   AE+L   M   GC  NV ++++LI+  C+   +E A+ +  ++   G  P+ +
Sbjct: 63  TAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSL 122

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN L     +  ++++A    + M   G   D  +Y T +  LC+NG +  A++L   L
Sbjct: 123 SYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL 182

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +       + +YN +IDGL K+G+ K A EL   +    L  D++TY  +   LC + K+
Sbjct: 183 KGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKI 242

Query: 357 DKARDLFLDME 367
           ++A   F  ++
Sbjct: 243 EEAIRTFCKVQ 253



 Score =  124 bits (310), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 7/202 (3%)

Query: 1   MEAAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+ A  F++L V  GC P++ +YNTL+  LCR G   VA++L  ++  G G     C P 
Sbjct: 137 MDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQL-KGKG-----CSPV 190

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            ++Y T+IDGL K G   +A EL  +M  + + P+++TY ++  G C  +   EA   F 
Sbjct: 191 LISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFC 250

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++ D G++P VV +N I+  LCK  +   A  L   MI  G  PN   Y  L++G    G
Sbjct: 251 KVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVEGLAYEG 310

Query: 180 RVNRAEELFVSMESMGCKHNVF 201
            V  A +L   + S G  +  F
Sbjct: 311 LVKEARDLLGQLCSRGVVNKKF 332



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 89/165 (53%), Gaps = 6/165 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  +L+  GC P + +YNT+I+GL + G T  AL L +EM +         +P+ +T
Sbjct: 175 AIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKG------LQPDIIT 228

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTTI  GLC+E  +++A   F K++D  I P VV YN+++ G C   + + A  LF  M+
Sbjct: 229 YTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMI 288

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
             G  PN  ++ +++  L   G + EA  LL  +   GV    F+
Sbjct: 289 SNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSRGVVNKKFM 333



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 90/184 (48%)

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   M   GC  ++ +Y++++NG C+   ++ A+     + S G +P+ V YN +  GL
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           F   + E A KL +EM   G   +   +   I  LC+ G +  A+E+   +       + 
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
            +YN L+   CK  ++  A      +       D+V+YN ++ ALC +G++D A DL   
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 366 MEAK 369
           ++ K
Sbjct: 182 LKGK 185



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 70/140 (50%)

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L  EM  KG  PD++ YN +  G+ +  +V+ A +  + +  +G   +T +Y   + G
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           L       +A +L   +       ++  +N LI  LC+ G ++ A E+   +P+     +
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 340 VVTYNIMIHALCADGKMDKA 359
            ++YN ++HA C   KMDKA
Sbjct: 121 SLSYNPLLHAFCKQKKMDKA 140


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 195/422 (46%), Gaps = 83/422 (19%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPNVFTYN L+  LC+      A  L  EM+N        C PN V+YTT+I  +C+ 
Sbjct: 175 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG------CCPNAVSYTTVISSMCEV 228

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V + ++L      E   P V  YN+LI+G C   D+     L  EM+++G+ PNV+S+
Sbjct: 229 GMVKEGRQL-----AERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISY 283

Query: 134 NVIMNELCKNGKMDEASRLLELMIQ----------------------------------- 158
           + ++NEL  +G+++ A  LL  M++                                   
Sbjct: 284 STLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIR 343

Query: 159 -IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G++PN   YNTL+ GFC  G +++A  +F+ ME +GC  N+ +Y  LING+ K   +E
Sbjct: 344 GFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLE 403

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
           GA+ ++++ML+ G  P+VV+Y ++   L    + + A  L + M +   A     +  FI
Sbjct: 404 GAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 463

Query: 278 DGLCKNGYIVEAVELFRTLR--------ILKY---------------------------- 301
            GLC  G +  A ++FR +         I+ Y                            
Sbjct: 464 KGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 523

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E     YN L+ G C +G   IA +L   +       D +T N++I A C  GK ++A  
Sbjct: 524 EWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQ 583

Query: 362 LF 363
           + 
Sbjct: 584 ML 585



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 164/319 (51%), Gaps = 8/319 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++   GC PN+ T ++L+ G    G T  AL+++ +M  G   FG+  +PN V 
Sbjct: 299 AFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRG---FGL--QPNVVA 353

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++ G C  G +DKA  +FL M++   +PN+ TY SLI+GF        A  ++ +M+
Sbjct: 354 YNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKML 413

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PNVV +  ++  LC++ K  EA  L+E+M +    P+   +N  + G C  GR++
Sbjct: 414 TSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLD 473

Query: 183 RAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            AE++F  ME    C  N+ +Y+ L++G  K   IE A  L  E+  +G++     YNTL
Sbjct: 474 WAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTL 533

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI--L 299
             G         A +L  +M  +G + D       I   CK G    AV++   +     
Sbjct: 534 LHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRR 593

Query: 300 KYELDIRAYNCLIDGLCKS 318
           K+  D+ +Y  +I GLC+S
Sbjct: 594 KWRPDVISYTNVIWGLCRS 612



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 176/369 (47%), Gaps = 12/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F +++ FGC+P+V  YN +++ L       +   ++ +M     E      PN  
Sbjct: 128 RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE------PNVF 181

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++  LCK   VD AK+L ++M ++   PN V+Y ++I   C      E +      
Sbjct: 182 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGR-----Q 236

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  +P V  +N ++N LCK         L+  M++ G+ PN   Y+TL++    +G++
Sbjct: 237 LAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQI 296

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
             A  L   M   GC  N+ + S L+ G         AL ++++M+   G++P+VV YNT
Sbjct: 297 ELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNT 356

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      +++A  +F  M+  G + +   Y + I+G  K G +  AV ++  +    
Sbjct: 357 LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG 416

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  Y  +++ LC+  + K A  L   + +      V T+N  I  LC  G++D A 
Sbjct: 417 CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 476

Query: 361 DLFLDMEAK 369
            +F  ME +
Sbjct: 477 KVFRQMEQQ 485



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 182/416 (43%), Gaps = 64/416 (15%)

Query: 1   MEAAALFMKLRVFGCEP------------NVF-----TYNTLINGLCRTGHTIVALNLFE 43
           ++ +A+  +LR   C P            N+F     T+  +I  L   G       L +
Sbjct: 40  IKESAVLKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQ 99

Query: 44  EMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH 103
           +M       G  C  +   + ++I    + G  ++A E+F ++K+   +P+V  YN ++ 
Sbjct: 100 QMKLQ----GFHCSEDL--FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLD 153

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
                N       ++ +M   G +PNV ++NV++  LCKN K+D A +LL  M   G  P
Sbjct: 154 TLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCP 213

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           NA  Y T++   C  G V    +L    E +     V  Y+ LING CK ++ +G + L 
Sbjct: 214 NAVSYTTVISSMCEVGMVKEGRQLAERFEPV-----VSVYNALINGLCKERDYKGGVELM 268

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV----------------- 266
           SEM+ KGI P+V+ Y+TL   L    Q+E AF L  +M + G                  
Sbjct: 269 SEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVR 328

Query: 267 -----AADTW--------------AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
                A D W              AY T + G C +G I +AV +F  +  +    +IR 
Sbjct: 329 GTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRT 388

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           Y  LI+G  K G L+ A  ++  +       +VV Y  M+ ALC   K  +A  L 
Sbjct: 389 YGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLI 444



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 169/357 (47%), Gaps = 10/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV +Y+TLIN L  +G   +A +L  +M          C PN  T ++++ G    
Sbjct: 275 GISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG------CHPNIHTLSSLVKGCFVR 328

Query: 74  GFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G    A +++ +M +   + PNVV YN+L+ GFC   + ++A  +F+ M + G  PN+ +
Sbjct: 329 GTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRT 388

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++N   K G ++ A  +   M+  G  PN  VY ++++  C   +   AE L   M 
Sbjct: 389 YGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMS 448

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQV 251
              C  +V +++  I G C    ++ A  ++ +M  +    P++V YN L  GL + +++
Sbjct: 449 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRI 508

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A+ L  E+   GV   T  Y T + G C  G    A++L   + +     D    N +
Sbjct: 509 EEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMI 568

Query: 312 IDGLCKSGRLKIAWELFR--SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           I   CK G+ + A ++    S  R     DV++Y  +I  LC     +    LF  M
Sbjct: 569 ILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERM 625



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 135/264 (51%), Gaps = 11/264 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F+ +   GC PN+ TY +LING  + G    A+ ++ +M          C PN V
Sbjct: 369 KAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG------CCPNVV 422

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT++++ LC+     +A+ L   M  EN  P+V T+N+ I G C A   + A+ +F +M
Sbjct: 423 VYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             Q    PN+V++N +++ L K  +++EA  L   +   GV  +   YNTL+ G C  G 
Sbjct: 483 EQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGL 542

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVI 237
              A +L   M   G   +  + +++I  YCK  + E A+ +  +++S G    +PDV+ 
Sbjct: 543 PGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQML-DLVSCGRRKWRPDVIS 601

Query: 238 YNTLFIGLFEIHQVERAFKLFDEM 261
           Y  +  GL   +  E    LF+ M
Sbjct: 602 YTNVIWGLCRSNCREDGVILFERM 625



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 119/234 (50%), Gaps = 9/234 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ K+   GC PNV  Y +++  LCR      A +L E M+  N      C P+  T
Sbjct: 405 AVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKEN------CAPSVPT 458

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +   I GLC  G +D A+++F +M+ +    PN+VTYN L+ G   AN   EA  L  E+
Sbjct: 459 FNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 518

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+ +  ++N +++  C  G    A +L+  M+  G  P+    N ++  +C  G+ 
Sbjct: 519 FMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKA 578

Query: 182 NRAEELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            RA ++   VS      + +V SY+ +I G C++   E  + L+  M+S+ I P
Sbjct: 579 ERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 116/236 (49%), Gaps = 5/236 (2%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           ++F V++ +L  +G++D    LL+ M   G   +  ++ +++  +   G   RA E+F  
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 135

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           ++  GC  +V  Y+ +++       I+    +Y +M   G +P+V  YN L   L + ++
Sbjct: 136 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 195

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A KL  EM   G   +  +Y T I  +C+ G + E  +L       ++E  +  YN 
Sbjct: 196 VDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAE-----RFEPVVSVYNA 250

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LI+GLCK    K   EL   +    +  +V++Y+ +I+ L   G+++ A  L   M
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQM 306



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 22/154 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  L  ++ + G E +  TYNTL++G C  G   +AL L  +M  NG         P+ 
Sbjct: 510 EAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKS-------PDE 562

Query: 61  VTYTTIIDGLCKEGFVDKAKELF--LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +T   II   CK+G  ++A ++   +        P+V++Y ++I G C +N   +   LF
Sbjct: 563 ITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILF 622

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
             M+ + + P       I+  +C+     EA+R+
Sbjct: 623 ERMISERIIP-------ILRSVCQ-----EAARM 644



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 61/120 (50%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           QV+    L  +M+  G       + + I    + G    AVE+F  ++    +  ++ YN
Sbjct: 90  QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 149

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ++D L    R+++ + ++R + R     +V TYN+++ ALC + K+D A+ L ++M  K
Sbjct: 150 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 209


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 120/365 (32%), Positives = 191/365 (52%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F ++   G  PN F+Y TLI+ L + G+   A  L   M      F VV      
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV------ 193

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++DGL K G  + A+++F  + +E++ PN VTY++LI G C   D N+ + L  EM
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNV+ ++ I++   K G ++EA  ++  M+Q  + PN FVY TL+DG+    + 
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  M+S G + N F     +N   ++  +E A  L+ +M+S+G+ PD V Y ++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F+  +   AF +  EM       D  AY   I+GL K G   E+      +R L  
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +N +I+  CK G L  A +L   +    L  + +T NI++  LCA G+++K  D
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 362 LFLDM 366
           L  DM
Sbjct: 493 LLNDM 497



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/390 (29%), Positives = 191/390 (48%), Gaps = 41/390 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   ++  G  P++ TYNTL+NG C+ G    A  L  E++  N E      PN +T
Sbjct: 36  AVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLE------PNVIT 89

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT+ID  CK   ++ A  ++ +M  +++ P+VVTY  +++G C +    EAK +F EM 
Sbjct: 90  YTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFREME 149

Query: 123 DQGVQPN-----------------------------------VVSFNVIMNELCKNGKMD 147
           + GV PN                                   VV +  +M+ L K G  +
Sbjct: 150 EVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMAN 209

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
            A  + +++++  + PN   Y+ L+DG C  G VN+ E L   ME      NV  YS ++
Sbjct: 210 NAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIV 269

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +GY K   +  A+ +  +M+ + I P+V +Y TL  G F+  Q   A  LF EM+  G+ 
Sbjct: 270 DGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLE 329

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            + +   +F++ L ++G + EA ELF+ +       D   Y  ++DG  K+G+   A+ +
Sbjct: 330 ENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNI 389

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            + +       DVV YN++I+ L   GK +
Sbjct: 390 AQEMTEKSSGFDVVAYNVLINGLFKLGKYE 419



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 181/352 (51%), Gaps = 6/352 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V  +N LI+G CR G    A+ L E M            P+ VTY T+++G CK G + 
Sbjct: 16  SVEHFNVLIDGYCRNGEISRAVELLEGMKTEGP------APDIVTYNTLMNGFCKIGDLF 69

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            AK+L  ++   N+ PNV+TY +LI  +C +    +A  ++ EM  + + P+VV++  IM
Sbjct: 70  TAKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIM 129

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N LCK+GK++EA  +   M ++GV PN F Y TL+D     G V  A  L   M   G  
Sbjct: 130 NGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIG 189

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +V  Y+ L++G  K      A  ++  +L + + P+ V Y+ L  G  ++  V +   L
Sbjct: 190 FDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELL 249

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+   +  +   Y + +DG  K G + EA+++ R +       ++  Y  LIDG  K
Sbjct: 250 LQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFK 309

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +  IA +LF+ +    L  +    +  ++ L   G+M++A +LF DM ++
Sbjct: 310 ADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR 361



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 102/399 (25%), Positives = 185/399 (46%), Gaps = 31/399 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           EA  LF  +   G  P+   Y ++++G  + G    A N+ +EM   +  F VV      
Sbjct: 350 EADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLI 409

Query: 57  -----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                   P++ T+ T+I+  CKEG +  A +L  +MK   + P
Sbjct: 410 NGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKP 469

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N +T N L+   C A +  +   L  +M+  G  P   +   +++   K+ + D    + 
Sbjct: 470 NSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMH 529

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + ++ +GV+ +   YNTL+  FC  G + RA  +F  M   G   ++ +Y+ LI+GYC +
Sbjct: 530 DQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCIS 589

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
             ++ A +++S+ML++G+ P+V  YN L  GL     ++ A  L ++M+  G+  +   Y
Sbjct: 590 SHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTY 649

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              + G  K G + E V+L+  +    +    R YN LI    K  ++  A EL + +  
Sbjct: 650 DILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQV 709

Query: 334 GVLIADVVTYNIMI---HALCADGKMDKARDLFLDMEAK 369
             +  +  TY+I+I   + L    +++K+       EAK
Sbjct: 710 RGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAK 748



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 137/244 (56%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ +V  FNV+++  C+NG++  A  LLE M   G  P+   YNTLM+GFC  G +  A+
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   +  +  + NV +Y+ LI+ YCK++ +E AL +Y EM  K + PDVV Y  +  GL
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +VE A  +F EM+  GV  + ++Y T ID L K G + EA  L   + +     D+
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  L+DGL K+G    A ++F+ L    L+ + VTY+ +I   C  G ++K   L  +
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 366 MEAK 369
           ME K
Sbjct: 253 MEEK 256



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 135/276 (48%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I  +V  +N LI G+C   + + A  L   M  +G  P++V++N +MN  CK G +  A 
Sbjct: 13  IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +L+  +  + + PN   Y TL+D +C +  +  A  ++  M       +V +Y+ ++NG 
Sbjct: 73  KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK+ ++E A S++ EM   G+ P+   Y TL   LF+   V  AF L   M   G+  D 
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   +DGL K G    A ++F+ L       +   Y+ LIDG CK G +     L + 
Sbjct: 193 VVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQE 252

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +  +V+ Y+ ++      G +++A D+   M
Sbjct: 253 MEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288



 Score = 68.6 bits (166), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 79/174 (45%), Gaps = 18/174 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+  ++   G  PNV TYN L+ GL        A  L  +M     E G+V  PN  
Sbjct: 594 KAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMK----ERGLV--PNAT 647

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G  K G + +  +L+ +M  +   P   TYN LI  F      ++AK L  EM
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEM 707

Query: 122 MDQGVQPNVVSFNVI------------MNELCKNGKMDEASRLLELMIQIGVRP 163
             +G+ PN  +++++            +N+  K     EA RL E M + G  P
Sbjct: 708 QVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIP 761



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 76/164 (46%), Gaps = 18/164 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  +++  G  PN  TY+ L++G  + G+    + L+ EM       G V  P T 
Sbjct: 629 EAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK----GFV--PKTR 682

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE-------- 113
           TY  +I    K   + +AKEL  +M+   I PN  TY+ LI G+   +   E        
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRS 742

Query: 114 ----AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
               AK LF EM ++G  P   +   I   L K GK  +A R+L
Sbjct: 743 YQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRIL 786


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  197 bits (500), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 126/399 (31%), Positives = 197/399 (49%), Gaps = 33/399 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           +A  LF K+   G  PNV TYN +I+GLC++G    A    E+M                
Sbjct: 274 DAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFI 333

Query: 49  NG------------------EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           NG                  E G V  PN V Y T+IDG CK G + +A ++   M  + 
Sbjct: 334 NGLIKLEKIDEANCVLKEMSELGFV--PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I+PN VT NSLI GFC ++   +A+ +  EM+ +G+  N  SF++++N LC   +   A 
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTAL 451

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
             +  M+   +RPN  +  TL+ G C  G+   A EL+  +   G   N+ + + LI+G 
Sbjct: 452 HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGL 511

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   ++  L L  +ML +G+  D + YNTL  G  +  +V+  F+L +EM + G+  D 
Sbjct: 512 CKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDI 571

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + +   + GLC    I EA  L+   +   Y  ++  Y  +IDG CK+ +++    L   
Sbjct: 572 YTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNE 631

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L    L  + V YN +I A C +G M+ A  L  DM+++
Sbjct: 632 LVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSR 670



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 183/350 (52%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V  ++T+IN  C+      A+ LF +M     + GV   PN VTY  II GLCK 
Sbjct: 251 GIIPDVHLFSTMINAFCKGHREDDAIGLFSKME----KLGVA--PNVVTYNNIIHGLCKS 304

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A     KM  E ++P+++TY+  I+G       +EA C+  EM + G  PN V +
Sbjct: 305 GRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVY 364

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK G + EA ++ + M+  G+ PN+   N+L+ GFC + ++ +AE +   M  
Sbjct: 365 NTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIG 424

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  S+S++IN  C       AL    EML + ++P+  +  TL  GL +  +   
Sbjct: 425 RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGE 484

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G   +       I GLCK G + E ++L R +       D   YN LI 
Sbjct: 485 AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS 544

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G CK G++K  +EL   + +  +  D+ T+N+++H LC   K+D+A  L+
Sbjct: 545 GCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLW 594



 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/346 (33%), Positives = 184/346 (53%), Gaps = 6/346 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ +L   G  PN+ T N LI+GLC+ G+    L L  +M     E G+V   + +
Sbjct: 484 EAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDML----ERGLVF--DRI 537

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I G CKEG V +  EL  +M  + I P++ T+N L+HG C A+  +EA  L+ E 
Sbjct: 538 TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHEC 597

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PNV ++ V+++  CK  K++E   LL  ++   +  N+ VYN+L+  +C+ G +
Sbjct: 598 KKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNM 657

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  L   M+S G   +  +YS L++G C    ++ A  L  EM  +G+ P+VV Y T+
Sbjct: 658 NAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTI 717

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ Q+ +   +  EM  H +  + + Y   IDG CK G   EA +L   +     
Sbjct: 718 IGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGI 777

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
             D   YN   +GLCK G+++ A+++   +  G +  D +TY  +I
Sbjct: 778 LPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/410 (28%), Positives = 196/410 (47%), Gaps = 64/410 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-----GNGEFGVVC------------ 56
           G  PN  T N+LI G C++     A N+ EEM         G F +V             
Sbjct: 391 GISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTA 450

Query: 57  ------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                       +PN    TT++ GLCK G   +A EL+ ++  +   PN+VT N+LIHG
Sbjct: 451 LHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHG 510

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C A +  E   L  +M+++G+  + +++N +++  CK GK+ E   L E M++ G++P+
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            + +N L+ G C   +++ A  L+   +  G   NV++Y ++I+GYCK  ++E   +L +
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           E++SK ++ + V+YN+L         +  AF+L D+M+  GV      Y + + GLC  G
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIG 690

Query: 285 YIVEAVELFRTLR----------------------------ILKYELDIR-------AYN 309
            + +A  L   +R                            I+  E+           Y 
Sbjct: 691 LVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYT 750

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +IDG CK G+ K A +L   +    ++ D VTYN   + LC +GK+++A
Sbjct: 751 IMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEA 800



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/310 (31%), Positives = 165/310 (53%), Gaps = 2/310 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+  T T ++  L K   + K+ E++  +    I P+V  ++++I+ FC  +  ++A  L
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M   GV PNVV++N I++ LCK+G++DEA R  E M++  V P+   Y+  ++G   
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             +++ A  +   M  +G   N   Y+ LI+GYCK   I  AL +  +MLSKGI P+ V 
Sbjct: 339 LEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            N+L  G  +  Q+ +A  + +EM   G+  +  ++   I+ LC     V A+   R + 
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKM 356
           +     +      L+ GLCK+G+   A EL+ R L +G  + ++VT N +IH LC  G M
Sbjct: 459 LRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKG-FVPNIVTSNALIHGLCKAGNM 517

Query: 357 DKARDLFLDM 366
            +   L  DM
Sbjct: 518 QETLKLLRDM 527



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 143/266 (53%), Gaps = 6/266 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+++T+N L++GLC       A  L+ E    NG       PN  TY  +IDG CK 
Sbjct: 566 GIQPDIYTFNLLLHGLCNADKIDEASRLWHE-CKKNGYV-----PNVYTYGVMIDGYCKA 619

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V++ + L  ++  + +  N V YNSLI  +C   + N A  L  +M  +GV  +  ++
Sbjct: 620 NKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATY 679

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + +M+ LC  G +D+A  LL+ M + G+ PN   Y T++ G+   G++N+   +   M S
Sbjct: 680 SSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSS 739

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                N F+Y+I+I+G+CK  + + A  L +EM  KGI PD V YN    GL +  +VE 
Sbjct: 740 HNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEE 799

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDG 279
           AFK+ DEM    V  D   Y T IDG
Sbjct: 800 AFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 6/68 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++   G  P+  TYN   NGLC+ G    A  + +EM++     G VC  + +
Sbjct: 764 EAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSS-----GAVCL-DEI 817

Query: 62  TYTTIIDG 69
           TYTT+IDG
Sbjct: 818 TYTTLIDG 825


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 179/339 (52%), Gaps = 12/339 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P+ FT+N+LI G CRT    VA +LF +M   G  +       + V+Y  +I+G C+
Sbjct: 159 GWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQ-------DAVSYAALIEGFCE 211

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D+A ELF +M      P++ T+ +L+ G C A    E  C+  +M + G +P   +
Sbjct: 212 AGRIDEALELFREM----TQPDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRA 267

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  C+  K +EA ++L  M   G+ P       +++ +C  GR++ A  +F SM 
Sbjct: 268 YAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMR 327

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC+ NV++Y+ ++ G+C   ++  A++L  +M   G++PDVV YN L  G      + 
Sbjct: 328 FKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIG 387

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF+L   M+ +G+AAD + Y   ID LCK G + EA  LF  L       +   +N +I
Sbjct: 388 SAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVI 447

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           +GLCK+G+  +A     ++       D  TY+  I  LC
Sbjct: 448 NGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLC 486



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 167/343 (48%), Gaps = 10/343 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P   TYN LI  LCR      A      M           +P+  T+ ++I G C+   +
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGW------RPDAFTFNSLILGYCRTQQL 180

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A +LF KM     + + V+Y +LI GFC A   +EA  LF EM     QP++ +   +
Sbjct: 181 EVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM----TQPDMYTHAAL 236

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC  G+ +E   +L+ M ++G RP    Y  L+D +C   +   AE++   M   G 
Sbjct: 237 VKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGL 296

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              V + +I++N YC+   + GA+ ++  M  KG +P+V  YN +  G     +V +A  
Sbjct: 297 MPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMA 356

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D+M+  GV  D   Y   I G C +G+I  A  L R +       D   YN LID LC
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K+G++  A  LF  L    +  + VT+N +I+ LC  GK D A
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVA 459



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/400 (28%), Positives = 176/400 (44%), Gaps = 45/400 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF K+   G   +  +Y  LI G C  G    AL LF EM           +P+  T
Sbjct: 183 AHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----------QPDMYT 232

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++ GLC  G  ++   +  KMK+    P    Y +L+  +C      EA+ +  EM 
Sbjct: 233 HAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMF 292

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D G+ P VV+  +++N  C+ G+M  A R+ E M   G  PN + YN ++ GFC  G+V 
Sbjct: 293 DSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVY 352

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  L   M   G + +V +Y++LI G C +  I  A  L   M   G+  D   YN L 
Sbjct: 353 KAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLI 412

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  +V+ A  LFD ++  G+  ++  + T I+GLCK G    A      +    Y 
Sbjct: 413 DALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYA 472

Query: 303 LDIRAYNCLIDGLCKS-----------------------------GRL------KIAWEL 327
            D   Y+  I+ LCK+                              RL       +A  +
Sbjct: 473 PDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRI 532

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  +       DVVTY   + A C +G++D+A ++  +M+
Sbjct: 533 WGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMK 572



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/330 (31%), Positives = 158/330 (47%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G  P V T   ++N  CR G    A+ +FE M          C+PN  
Sbjct: 283 EAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKG------CEPNVW 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I+ G C  G V KA  L  +M++  + P+VVTYN LI G C       A  L   M
Sbjct: 337 TYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM 396

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  +  ++NV+++ LCK GK+DEA  L + +   G+RPN+  +NT+++G C  G+ 
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A     +M S G   + ++YS  I   CK K  +  L    EML K +KP  V Y  +
Sbjct: 457 DVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIV 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              LF       A +++ +M   G + D   Y T +   C  G + EA  +   ++  + 
Sbjct: 517 INRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRT 576

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            +D  AYN LIDG    G+   A  + + +
Sbjct: 577 IVDAMAYNTLIDGHTSIGQTDRAVTILKHM 606



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 164/361 (45%), Gaps = 13/361 (3%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
            LR F   P    + +L+    R   T + L LF  M            P   TY  +I 
Sbjct: 87  PLRPFFDRP----FRSLLTHFSRYALTPLMLRLFAHMYRHAPP-----APTGATYNALIR 137

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LC+   +  A+     M      P+  T+NSLI G+C       A  LF +M  +G   
Sbjct: 138 ALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQ 197

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           + VS+  ++   C+ G++DEA  L   M Q    P+ + +  L+ G C  GR      + 
Sbjct: 198 DAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGLCML 253

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M+ +G +    +Y+ L++ +C+ ++ E A  + +EM   G+ P VV    +       
Sbjct: 254 QKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCRE 313

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A ++F+ M+  G   + W Y   + G C  G + +A+ L   +R    E D+  Y
Sbjct: 314 GRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTY 373

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N LI G C  G +  A+ L R +    L AD  TYN++I ALC  GK+D+A  LF  +E 
Sbjct: 374 NLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEY 433

Query: 369 K 369
           +
Sbjct: 434 R 434



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 187/447 (41%), Gaps = 92/447 (20%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +R  GCEPNV+TYN ++ G C  G    A+ L ++M     E GV  +P+ VT
Sbjct: 319 AVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR----ECGV--EPDVVT 372

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I G C +G +  A  L   M+   +  +  TYN LI   C     +EA  LF  + 
Sbjct: 373 YNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR-- 180
            +G++PN V+FN ++N LCK GK D A   LE MI  G  P+ + Y+  ++  C T    
Sbjct: 433 YRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQ 492

Query: 181 ------------------------VNR---------AEELFVSMESMGCKHNVFSYSILI 207
                                   +NR         A  ++  M S GC  +V +Y+  +
Sbjct: 493 EGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSV 552

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA------------- 254
             YC    ++ A ++ +EM       D + YNTL  G   I Q +RA             
Sbjct: 553 RAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASM 612

Query: 255 --------------------------------------FKLFDEMQRHGVAADTWAYRTF 276
                                                 F+LF+ M+++ V +    Y + 
Sbjct: 613 PNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSI 672

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           ++G  +   + E   L   ++     L+   YN L++  CK      AW L  S+     
Sbjct: 673 LEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGF 732

Query: 337 IADVVTYNIMIHALCADGKMDKARDLF 363
           + +++ Y  ++  L A+G+ D+A+++F
Sbjct: 733 LPNLIFYQYLLSGLTAEGQADRAKEIF 759



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/369 (24%), Positives = 151/369 (40%), Gaps = 57/369 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF  L   G  PN  T+NT+INGLC+ G   VA    E M +          P+T 
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAG------YAPDTY 476

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+  I+ LCK     +      +M  +++ P+ V Y  +I+      ++  A  ++ +M
Sbjct: 477 TYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQM 536

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P+VV++   +   C  G++DEA  ++  M +     +A  YNTL+DG    G+ 
Sbjct: 537 VSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQT 596

Query: 182 NRAEELFVSMESMGCKHNVFSYSI------------------------------------ 205
           +RA  +   M  +    N F++ I                                    
Sbjct: 597 DRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFEL 656

Query: 206 ---------------LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
                          ++ G+ + + ++   SL S M  + +  +  IYN L     ++  
Sbjct: 657 MKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRM 716

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
              A+ L   M  HG   +   Y+  + GL   G    A E+FR+ R  +Y  D   +  
Sbjct: 717 YSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKV 776

Query: 311 LIDGLCKSG 319
           +IDG  + G
Sbjct: 777 IIDGFIRKG 785


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/389 (30%), Positives = 188/389 (48%), Gaps = 44/389 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ FTY TLI G C+      A+NL  EM       G+   P  VT+ ++I  LC+  F 
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAA----GIT--PTIVTFGSLIRKLCELNFT 103

Query: 77  DKAKELFLKMKDENINPNV-----------------------------------VTYNSL 101
           DKA ++F +M D  + P+                                    VTY  L
Sbjct: 104 DKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVL 163

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           +H    A  W +   +F EM+ +G  P +V++  ++N  CK G++D+A  L+  +   G 
Sbjct: 164 VHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGR 223

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+  +Y+TL+DG C   R + A ELF    + G   +V  Y+  I+G CK  +++ A +
Sbjct: 224 SPSGSLYSTLIDGLCKHDRHDEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKA 281

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           ++ +M+  G  PD V YN +   L + ++V  A +L D+                +DGLC
Sbjct: 282 VHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLC 341

Query: 282 KNGYIVEA-VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           K+  + EA V L R L        +  Y+ +IDGLCK+ RL  A+ + + + R   + DV
Sbjct: 342 KSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDV 401

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VTY  +I A C  G++D+AR+LF  M  +
Sbjct: 402 VTYTAIIDAFCKVGRLDEARELFQRMHER 430



 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 189/365 (51%), Gaps = 9/365 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA+ F ++   GC P+  TY  L++ L +         +FEEM +          P  VT
Sbjct: 141 AASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHS------PELVT 194

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+++G CK G +D+A  L  ++K    +P+   Y++LI G C  +  +EA+ LF EM 
Sbjct: 195 YATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF-EMA 253

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              VQ +V+ +   ++ LCK GK+DEA  +   MI+ G  P+   YN ++   C   RV+
Sbjct: 254 AGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVS 312

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK-PDVVIYNTL 241
            A+EL        C   V   ++L++G CK++ +E A  +   ML  G + P VV Y+ +
Sbjct: 313 EAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAV 372

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A+ +  +M+R G   D   Y   ID  CK G + EA ELF+ +     
Sbjct: 373 IDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGC 432

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD+ AYN LI G C++ ++  A  +   +    +  +VV+ + ++  LC + ++++AR 
Sbjct: 433 ALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEARL 492

Query: 362 LFLDM 366
           L   M
Sbjct: 493 LMEKM 497



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 189/404 (46%), Gaps = 44/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  G  P + T+ +LI  LC    T  AL +F +M +      +  KP+  
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMID------MKVKPDAF 123

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +I  LCK   +D A   F +M      P+ VTY  L+H    A  W +   +F EM
Sbjct: 124 LYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEM 183

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P +V++  ++N  CK G++D+A  L+  +   G  P+  +Y+TL+DG C   R 
Sbjct: 184 LSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRH 243

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF    + G   +V  Y+  I+G CK  +++ A +++ +M+  G  PD V YN +
Sbjct: 244 DEARELFEM--AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVI 301

Query: 242 FIGLFEIHQVERAFKLFDE-MQRH---GV------------------------------- 266
              L + ++V  A +L D+ M+R    GV                               
Sbjct: 302 IYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGD 361

Query: 267 -AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
            A     Y   IDGLCK   + +A  + + +R      D+  Y  +ID  CK GRL  A 
Sbjct: 362 RAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEAR 421

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ELF+ +       DVV YNI+I   C   K+D+A  +  +M  +
Sbjct: 422 ELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGR 465



 Score =  173 bits (439), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 158/289 (54%), Gaps = 9/289 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  +L+  G  P+   Y+TLI+GLC+      A  LFE MA G+ +       + +
Sbjct: 210 QALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFE-MAAGDVQ-------DVI 261

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+ I GLCK G +D+AK + +KM +    P+ V+YN +I+  C  N  +EAK L  + 
Sbjct: 262 VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQA 321

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR-PNAFVYNTLMDGFCLTGR 180
           M++   P V    V+++ LCK+ +++EA  +LE M++ G R P+   Y+ ++DG C   R
Sbjct: 322 MERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVIDGLCKADR 381

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +   M   GC  +V +Y+ +I+ +CK   ++ A  L+  M  +G   DVV YN 
Sbjct: 382 LDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCALDVVAYNI 441

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           L  G     +V+ A  + +EM   G+  +  +  T +DGLCK   + EA
Sbjct: 442 LIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEA 490



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 166/346 (47%), Gaps = 8/346 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N +T N+L+      G    A  +F++      E   + +P+  TY T+I G CK 
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKD------ELVTLFRPDDFTYGTLIRGFCKA 65

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A  L  +MK   I P +VT+ SLI   C  N  ++A  +F +M+D  V+P+   +
Sbjct: 66  EQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLY 125

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            V++  LCK  K+D A+   E M+Q G  P+   Y  L+       +  +  ++F  M S
Sbjct: 126 TVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLS 185

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    + +Y+ ++NGYCK   I+ ALSL   +   G  P   +Y+TL  GL +  + + 
Sbjct: 186 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE 245

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LF+     G   D   Y +FI GLCK G + EA  +   +       D  +YN +I 
Sbjct: 246 ARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIY 303

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            LCK  R+  A EL         +  V    +++  LC   ++++A
Sbjct: 304 SLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEA 349



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/308 (30%), Positives = 160/308 (51%), Gaps = 8/308 (2%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN---PNVVTYNSLIHGFCYANDWNEAK 115
           NT T  ++++    +G   +A  +F   KDE +    P+  TY +LI GFC A    +A 
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVF---KDELVTLFRPDDFTYGTLIRGFCKAEQIPQAV 72

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  EM   G+ P +V+F  ++ +LC+    D+A ++   MI + V+P+AF+Y  ++   
Sbjct: 73  NLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHL 132

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   +++ A   F  M   GC  +  +Y++L++   K  + E    ++ EMLSKG  P++
Sbjct: 133 CKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPEL 192

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V Y T+  G  +  ++++A  L   ++  G +     Y T IDGLCK+    EA ELF  
Sbjct: 193 VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM 252

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
                   D+  Y   I GLCK+G+L  A  +   +       D V+YN++I++LC D +
Sbjct: 253 --AAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNR 310

Query: 356 MDKARDLF 363
           + +A++L 
Sbjct: 311 VSEAKELM 318



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 85/175 (48%)

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G +HN ++ + L+  +  +     A  ++ + L    +PD   Y TL  G  +  Q+ +A
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L  EM+  G+      + + I  LC+  +  +A+++F  +  +K + D   Y  +I  
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LCK  +L +A   F  + +   + D VTY +++H+L    K ++   +F +M +K
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSK 186



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 6/90 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   GC  +V  YN LI G CR      A+ + EEMA G G      +PN V
Sbjct: 419 EARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMA-GRG-----IQPNVV 472

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
           + +TI+DGLCKE  V++A+ L  KM  E++
Sbjct: 473 SLSTIVDGLCKESRVEEARLLMEKMNFESL 502



 Score = 40.8 bits (94), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 3/110 (2%)

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           R G   +T+   + ++    +G   EA  +F+   +  +  D   Y  LI G CK+ ++ 
Sbjct: 10  RPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIP 69

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF---LDMEAK 369
            A  L   +    +   +VT+  +I  LC     DKA  +F   +DM+ K
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVK 119


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 103/303 (33%), Positives = 173/303 (57%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I   C+EG +++A E+   M D+ + P++ TYN++I+G C    +  AK + IE
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G+ P+  ++N ++ E C+     EA  +   M++ GV P+   +++LM  F     
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A   F  M+  G   +   Y++L++GYC+N  +  AL +  EML +G   DV+ YNT
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +   +  A KLFDEM   G   D + + T I G C++G + +A+ LF T+    
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + DI AYN LIDG CK G ++ A EL+  +    +  + +TY I+I+A C+ G + +A 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 361 DLF 363
            L+
Sbjct: 302 RLW 304



 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/349 (32%), Positives = 180/349 (51%), Gaps = 6/349 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           TYNTLI   CR G    A  +   MA+         KP+  TY  II+GLCK+G   +AK
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKG------LKPSLFTYNAIINGLCKKGRYARAK 56

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            + ++M +  ++P+  TYN+L+   C  ++++EAK +F EM+ QGV P++VSF+ +M   
Sbjct: 57  GILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVF 116

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            +N  +D+A      M + G+ P+  +Y  LM G+C  G +  A ++   M   GC  +V
Sbjct: 117 SRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDV 176

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ ++NG CK K +  A  L+ EM+ +G  PD   + TL  G  +   + +A  LF  
Sbjct: 177 IAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGT 236

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M +  +  D  AY T IDG CK G + +A EL+  +   K   +   Y  LI+  C  G 
Sbjct: 237 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 296

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  A+ L+  +    +   +VT N +I   C  G   KA +    M AK
Sbjct: 297 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK 345



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 188/343 (54%), Gaps = 12/343 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P++FTYN +INGLC+ G    A  +  EM N      +   P+T TY T++   C+ 
Sbjct: 31  GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN------IGLSPDTTTYNTLLVESCRR 84

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
               +AKE+F +M  + + P++V+++SL+  F      ++A   F +M   G+ P+ V +
Sbjct: 85  DNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYFRDMKKFGLVPDNVIY 144

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            V+M+  C+NG M EA ++ + M++ G   +   YNT+++G C    +  A++LF  M  
Sbjct: 145 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 204

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   + ++++ LI+G+C++  +  ALSL+  M  + IKPD+V YNTL  G  ++ ++E+
Sbjct: 205 RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK 264

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+D M    +  +   Y   I+  C  G++ EA  L+  +     +  +   N +I 
Sbjct: 265 ASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIK 324

Query: 314 GLCKSGRLKIAWE-LFRSLPRGVLIADVVTYNIMIHALCADGK 355
           G C+SG    A E L R + +GV   D ++YN +I+    DGK
Sbjct: 325 GYCRSGDSSKADEFLGRMIAKGV-APDHISYNTLIN----DGK 362



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/275 (32%), Positives = 145/275 (52%)

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           +VTYN+LI  +C      EA  +   M D+G++P++ ++N I+N LCK G+   A  +L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M+ IG+ P+   YNTL+   C     + A+E+F  M   G   ++ S+S L+  + +N+
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            ++ AL  + +M   G+ PD VIY  L  G      +  A K+ DEM   G   D  AY 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T ++GLCK   + +A +LF  +       D   +  LI G C+ G +  A  LF ++ + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  D+V YN +I   C  G+M+KA +L+  M ++
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 275



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 41/173 (23%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  P+ +T+ TLI+G C+ G+   AL+LF  M   N       KP+ V
Sbjct: 194 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN------IKPDIV 247

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY----------------------- 98
            Y T+IDG CK G ++KA EL+  M    I PN +TY                       
Sbjct: 248 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVM 307

Query: 99  ------------NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
                       N++I G+C + D ++A      M+ +GV P+ +S+N ++N+
Sbjct: 308 IEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/361 (30%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++ ++   G  P++F+Y  ++N  C+ G    A N  +EM          C+PN V
Sbjct: 239 KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS------CCEPNVV 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++IDG    G V  AK++   M ++ I  N  TY  LI G+C      +A+ L   M
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++ +  +   + V+++  C  G++D+A R+ + M+++G++ N  + N+L++G+C  G V
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A E+ VSM+    K + + Y+ L++G+CK ++   A  L  EM +KG+   VV YNTL
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTL 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              LF +  VE A  +++ M + GVA +   Y T +D   K G    A+ +++      +
Sbjct: 473 LKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGF 532

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              I  YN +I G CK  +L  A E+F  +       D +TY  +I   C  G + +A  
Sbjct: 533 TKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALK 592

Query: 362 L 362
           L
Sbjct: 593 L 593



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 185/387 (47%), Gaps = 41/387 (10%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           CEPNV TYN+LI+G    G    A  +   M+    E G+    N+ TYT +I G CK G
Sbjct: 287 CEPNVVTYNSLIDGYVSLGDVCGAKKVLALMS----EKGI--PENSRTYTLLIKGYCKRG 340

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +++A++L   M ++N+  +   Y  LIH +C A   ++A  +   M+  G++ N V  N
Sbjct: 341 QMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICN 400

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N  CK G +++A+ +L  M    ++P+++ YNTL+DGFC      +A +L   M + 
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G    V +Y+ L+        +E AL +++ M  +G+ P+ V Y TL    F++   +RA
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             ++ +    G       Y T I G CK   +V+A E+F  ++ L +  D   Y  LIDG
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580

Query: 315 LCKSGRL---------------KIAWELFRSLPRGV--------------------LIAD 339
            CK G L                 + E++ SL  GV                    L  +
Sbjct: 581 YCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           VVTY  +I   C  G MDKA + +  M
Sbjct: 641 VVTYGSLIAGWCDKGMMDKAYNAYFKM 667



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 183/356 (51%), Gaps = 14/356 (3%)

Query: 11  RVFGC--EPNVFT----YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++ GC  E N+F     Y  LI+  C  G    AL + + M        V  K NTV   
Sbjct: 347 KLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAM------LKVGLKMNTVICN 400

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++I+G CK G V+KA E+ + MKD N+ P+   YN+L+ GFC   D+ +A  L  EM ++
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV   VV++N ++  L   G ++ A  +  LM + GV PN   Y TL+D F   G  +RA
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             ++    S G   ++  Y+ +I G+CK +++  A  ++ +M   G  PD + Y TL  G
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDG 580

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             ++  +  A KL D  +R G+++ T  Y + I G+ ++  + +   L   ++  +   +
Sbjct: 581 YCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPN 640

Query: 305 IRAYNCLIDGLCKSGRLKIAWE-LFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +  Y  LI G C  G +  A+   F+ + +G+   +++  + ++ +L   GK+D+A
Sbjct: 641 VVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGI-APNIIIGSKIVSSLYRHGKIDEA 695



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 190/401 (47%), Gaps = 76/401 (18%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  +F+K++  G  P+  TY TLI+G C+ G+ + AL L ++M+  +G        +T
Sbjct: 553 VQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL-KDMSERDG-----ISSST 606

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y ++I G+ +   + K   L  +MK+  ++PNVVTY SLI G+C     ++A   + +
Sbjct: 607 EMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFK 666

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI--------------------- 159
           M+D+G+ PN++  + I++ L ++GK+DEA+ +L  +  I                     
Sbjct: 667 MIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLE 726

Query: 160 --------GVR------PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                   G +       N  VYN  + G C +  ++    +   +   G   + ++Y  
Sbjct: 727 TQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCS 786

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+      ++  A  L  +M++ G+ P++V+YN L  GL +   ++RA +LF+++ R G
Sbjct: 787 LIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKG 846

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           ++     Y T IDG CK G   EA+EL   +R               +G+C S       
Sbjct: 847 LSPTVVTYNTLIDGYCKGGRTTEALELKDKMR--------------EEGICPSS------ 886

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                          +TY+ +IH L  +GK +++  L  +M
Sbjct: 887 ---------------ITYSTLIHGLYMEGKSEQSVGLLNEM 912



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 189/426 (44%), Gaps = 64/426 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
           +AA + + ++ +  +P+ + YNTL++G C+    I A  L +EM N    F VV      
Sbjct: 414 KAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLL 473

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    PN VTY T++D   K G  D+A  ++     +   
Sbjct: 474 KNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFT 533

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            ++  YN++I GFC      +A+ +F++M + G  P+ +++  +++  CK G + EA +L
Sbjct: 534 KSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL 593

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            ++  + G+  +  +YN+L+ G   +  + +   L   M++     NV +Y  LI G+C 
Sbjct: 594 KDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCD 653

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE----------IHQVE---------- 252
              ++ A + Y +M+ KGI P+++I + +   L+           +HQ+           
Sbjct: 654 KGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAH 713

Query: 253 ------------RAFKLFDEMQRHGVA---ADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
                          K+ D   +  ++   ++   Y   I GLCK+  I +   +   L 
Sbjct: 714 SVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLL 773

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +  +  D   Y  LI      G++  A+ L   +    L+ ++V YN +I+ LC  G +D
Sbjct: 774 LKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLD 833

Query: 358 KARDLF 363
           +AR LF
Sbjct: 834 RARRLF 839



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 27/364 (7%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT------------- 62
            P+V +Y       C+  H +    +++E+     E  V+CK N +              
Sbjct: 129 RPDVSSY-------CKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYRE 181

Query: 63  -------YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
                  +  I+    ++G    A  +F  M      P++ + NSL+       +  +A 
Sbjct: 182 FSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKAL 241

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            ++ +M+  G+ P++ S+ +++N  CK G++DEA   ++ M +    PN   YN+L+DG+
Sbjct: 242 LVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGY 301

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
              G V  A+++   M   G   N  +Y++LI GYCK  ++E A  L   M+ K +  D 
Sbjct: 302 VSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDE 361

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
            +Y  L        +V+ A ++ D M + G+  +T    + I+G CK G++ +A E+  +
Sbjct: 362 HVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVS 421

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++    + D   YN L+DG CK      A++L   +    +   VVTYN ++  L   G 
Sbjct: 422 MKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGH 481

Query: 356 MDKA 359
           ++ A
Sbjct: 482 VEHA 485



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 172/359 (47%), Gaps = 8/359 (2%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R F   P VF  + ++      G T  AL +F+ M    G+ G V  P+  +  +++  L
Sbjct: 180 REFSFSPTVF--DMILKVFAEKGMTKFALCVFDNM----GKCGRV--PSLRSCNSLLSNL 231

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            + G   KA  ++ +M    I P++ +Y  +++ +C     +EA     EM     +PNV
Sbjct: 232 VQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNV 291

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V++N +++     G +  A ++L LM + G+  N+  Y  L+ G+C  G++ +AE+L   
Sbjct: 292 VTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGC 351

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M       +   Y +LI+ YC    ++ AL +   ML  G+K + VI N+L  G  ++  
Sbjct: 352 MMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGH 411

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V +A ++   M+   +  D++ Y T +DG CK    ++A +L   +        +  YN 
Sbjct: 412 VNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNT 471

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+  L   G ++ A  ++  + +  +  + VTY  ++ A    G  D+A  ++ D  +K
Sbjct: 472 LLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSK 530



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 141/308 (45%), Gaps = 51/308 (16%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PNV TY +LI G C  G    A N + +M +     G+   PN +  + I+  L + G 
Sbjct: 638 SPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDK----GIA--PNIIIGSKIVSSLYRHGK 691

Query: 76  VDKAKELFLKMKDENINP-------------------------------------NVVTY 98
           +D+A  +  ++ D  I+P                                     N + Y
Sbjct: 692 IDEANLILHQIAD--IDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVY 749

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           N  I G C + + ++ + +  +++ +G  P+  ++  +++     GK++EA  L + MI 
Sbjct: 750 NIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMIN 809

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ PN  VYN L++G C +G ++RA  LF  +   G    V +Y+ LI+GYCK      
Sbjct: 810 AGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTE 869

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL L  +M  +GI P  + Y+TL  GL+   + E++  L +EM + G  +      + +D
Sbjct: 870 ALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGS------SVMD 923

Query: 279 GLCKNGYI 286
            L    Y+
Sbjct: 924 PLVARAYV 931



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 142/348 (40%), Gaps = 55/348 (15%)

Query: 77  DKAKELF-LKMKDENINPNVVTYNSLIHGFC----------YAND--------------W 111
           D + E F L  K     P+V +Y  ++H             Y N+              W
Sbjct: 113 DASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVW 172

Query: 112 NE------------------------------AKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +E                              A C+F  M   G  P++ S N +++ L 
Sbjct: 173 DELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLV 232

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           +NG+  +A  + E MI +G+ P+ F Y  +++ +C  GRV+ A      ME   C+ NV 
Sbjct: 233 QNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVV 292

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+GY    ++ GA  + + M  KGI  +   Y  L  G  +  Q+E+A KL   M
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCM 352

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
               +  D   Y   I   C  G + +A+ +   +  +  +++    N LI+G CK G +
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             A E+  S+    L  D   YN ++   C      KA  L  +M  K
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 103/204 (50%), Gaps = 9/204 (4%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N   YN  I GLC++ +      +  ++          C P+  TY ++I      G V+
Sbjct: 745 NNIVYNIAITGLCKSKNIDDVRRILSDLL-----LKGFC-PDNYTYCSLIHACSAVGKVN 798

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  L   M +  + PN+V YN+LI+G C + + + A+ LF ++  +G+ P VV++N ++
Sbjct: 799 EAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLI 858

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  CK G+  EA  L + M + G+ P++  Y+TL+ G  + G+  ++  L   M   G  
Sbjct: 859 DGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKG 918

Query: 198 HNVFSYSILINGYCK--NKEIEGA 219
            +V    ++   Y K  +K+ E A
Sbjct: 919 SSVMD-PLVARAYVKWRDKQSESA 941


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 184/365 (50%), Gaps = 11/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+   G  P+ FT  + I G CR+     A  +FEEM N           N V
Sbjct: 210 EAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----------NEV 259

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I GLC+ G +D+A  LF++MKD+   PNV TY +LI G C  N  ++A  L  EM
Sbjct: 260 SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEM 318

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++ + P+++++N ++   C+ G +D A RLL LM + G+ P+   Y   +D  C + RV
Sbjct: 319 LERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRV 378

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF S+   G   NV  YS+LI+GYCK  +++ A  L+ +MLSK   P+   +N L
Sbjct: 379 EEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNAL 438

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL     ++ A  LFD+M + G+    + +   I  + K G   +A +  + +     
Sbjct: 439 IHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGE 498

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +   R YN  I+  C +G+++ A ++   +    +  D  TY  +I A    G    A D
Sbjct: 499 KPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFD 558

Query: 362 LFLDM 366
           +   M
Sbjct: 559 VLKSM 563



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 158/304 (51%), Gaps = 5/304 (1%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++  L + G VD+  +L+ +M +E ++ ++ T+N +I+ +C      EAK    +M+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P+  +    +   C++  +D A R+ E M       N   YN L+ G C  GR++
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM----PNRNEVSYNQLIHGLCEAGRID 275

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LFV M+   C  NV++Y+ LI G C+ K +  A+ L  EML + + PD++ YN+L 
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNLVPDLITYNSLI 334

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G      ++ A++L   M+  G+  D   Y  FID LCK+  + EA  LF +L      
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            ++  Y+ LIDG CK G++  A  LF  +       +  T+N +IH LC+ G + +A  L
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454

Query: 363 FLDM 366
           F  M
Sbjct: 455 FDQM 458



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/359 (29%), Positives = 163/359 (45%), Gaps = 58/359 (16%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMAN-----GNGEFGV----VCKPNTVT----- 62
           P++ TYN+LI G CR GH   A  L   M           +G     +CK N V      
Sbjct: 325 PDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRL 384

Query: 63  ---------------YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
                          Y+ +IDG CK G VD+A  LF KM  +N +PN  T+N+LIHG C 
Sbjct: 385 FDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCS 444

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           A +  EA  LF +M+  G++P V +FN+++  + K G  D+A + L+ M+  G +P A  
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YN  ++ +C  G+V  AE++ V M+  G   + F+Y+ LI  Y K      A  +   M 
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564

Query: 228 SKGIKPDVVIYNTLFIGLFEI-HQVERA----------------------------FKLF 258
               +P    + +L   LF+  + VE++                             +LF
Sbjct: 565 DADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELF 624

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           +EM++HG   D+  Y   I G+CK   +  A++L   ++          +N +I   CK
Sbjct: 625 EEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCK 683



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 170/350 (48%), Gaps = 11/350 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +++T+N +IN  C+ G    A     +M            P+  T T+ I G C+   VD
Sbjct: 191 DIYTFNLMINVYCKMGFVKEAKQFMCKMIQAG------LSPDYFTSTSFILGYCRSKDVD 244

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A  +F +M     N N V+YN LIHG C A   +EA  LF+ M D    PNV ++  ++
Sbjct: 245 SAFRVFEEMP----NRNEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALI 300

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC+   + +A  LL+ M++  + P+   YN+L+ G C  G ++ A  L   M+  G  
Sbjct: 301 KGLCRKN-VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLV 359

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  +Y   I+  CK+  +E A  L+  +  +G+  +V++Y+ L  G  ++ +V+ A  L
Sbjct: 360 PDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCL 419

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F++M     + + + +   I GLC  G + EA+ LF  +  +  +  +  +N LI  + K
Sbjct: 420 FEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLK 479

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            G    A +  + +          TYN  I   C+ GK+ +A D+ + M+
Sbjct: 480 QGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMK 529



 Score =  157 bits (398), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 166/345 (48%), Gaps = 11/345 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           YN L+  L R G       L+ EM     EF  +   +  T+  +I+  CK GFV +AK+
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLE---EFVSM---DIYTFNLMINVYCKMGFVKEAKQ 213

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
              KM    ++P+  T  S I G+C + D + A  +F EM ++    N VS+N +++ LC
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLC 269

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           + G++DEA  L   M      PN + Y  L+ G C    V++A  L   M       ++ 
Sbjct: 270 EAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLI 328

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI G C+   ++ A  L S M  +G+ PD   Y      L + ++VE A +LFD +
Sbjct: 329 TYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSL 388

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              GV+A+   Y   IDG CK G + EA  LF  +       +   +N LI GLC +G L
Sbjct: 389 TEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNL 448

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K A  LF  + +  L   V T+NI+I  +   G  D A      M
Sbjct: 449 KEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKM 493



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 5/283 (1%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           KD+    ++  YN L+         +E   L+ EM+++ V  ++ +FN+++N  CK G +
Sbjct: 149 KDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFV 208

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA + +  MIQ G+ P+ F   + + G+C +  V+ A  +F  M +     N  SY+ L
Sbjct: 209 KEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPN----RNEVSYNQL 264

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C+   I+ A+SL+  M      P+V  Y  L  GL     V +A  L DEM    +
Sbjct: 265 IHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLDEMLERNL 323

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D   Y + I G C+ G++  A  L   ++      D R Y C ID LCKS R++ A  
Sbjct: 324 VPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARR 383

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF SL    + A+V+ Y+++I   C  GK+D+A  LF  M +K
Sbjct: 384 LFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 167/378 (44%), Gaps = 35/378 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+    C PN +T+N LI+GLC  G+   AL+LF++M     + G+  KP   
Sbjct: 415 EAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV----KMGL--KPTVY 468

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I  + K+G  D A +   KM      P   TYN+ I  +C A    EA+ + ++M
Sbjct: 469 TFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQM 528

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM--------- 172
            ++GV P+  ++  ++    K G    A  +L+ M      P+   + +L+         
Sbjct: 529 KEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYV 588

Query: 173 ---------DGFCLTGRVNRAE-----------ELFVSMESMGCKHNVFSYSILINGYCK 212
                    +     G V  +            ELF  ME  GC  +   Y  LI+G CK
Sbjct: 589 VEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICK 648

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            + +  AL L  +M  +GI P  +++N +     ++ +   A  + ++M   G +     
Sbjct: 649 VENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEH 708

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
            +T I GL + G       +F+ LR   Y  D  A+  LIDG+ K G ++   +LF  + 
Sbjct: 709 CKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEME 768

Query: 333 RGVLIADVVTYNIMIHAL 350
           +        TY+I+   L
Sbjct: 769 KNGCNFSPRTYSILTQKL 786


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 181/352 (51%), Gaps = 10/352 (2%)

Query: 11  RVFG---CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           RV G    +PN +TYN LI+ LC  G    AL++ ++M          C P+ VTY  ++
Sbjct: 156 RVVGGMPVQPNAYTYNPLIHTLCERGQVRDALSVLDDM------LCRGCAPDVVTYNILL 209

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           +  CK     +A EL   M+ E   PN VTYN L+ G C   D ++A  L   +   G +
Sbjct: 210 EATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCK 269

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+ V++N ++  LC   +  +A  L+  M++    PN   +N ++   C  G + +A +L
Sbjct: 270 PSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQL 329

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M   GC  N+ +Y+ +ING C+ + ++GA+ L S+M S G KPD+V YNTL  GL  
Sbjct: 330 LEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCS 389

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             Q   A +L D M ++G   D   + T I  LC+ G +V+A+E+F+ +       +   
Sbjct: 390 AAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSIT 449

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           Y+ +I GL K+ +L  A ELF  +       D + Y ++   L  D  +++A
Sbjct: 450 YSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEA 500



 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 186/365 (50%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +R  GC PN  TYN L++G+C  G    AL L   + +        CKP+TV
Sbjct: 220 QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG------CKPSTV 273

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ GLC       A EL  +M  EN  PN  T+N +I+  C      +A  L  +M
Sbjct: 274 NYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 333

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   N+V++N I+N LC+   +D A  LL  M   G +P+   YNTL+ G C   + 
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQW 393

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AEEL  +M   GC  +  +++ LI   C+   +  A+ ++ +M  KG  P+ + Y+T+
Sbjct: 394 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 453

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++++A +LF+EM   G   D   Y+   + L  +  I EA++  R L+    
Sbjct: 454 ISGLAKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGI 512

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 YN ++ GLC++G+ + A ++   +     + D +TY I+I  L  +G +++AR+
Sbjct: 513 SPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARE 572

Query: 362 LFLDM 366
           L + +
Sbjct: 573 LLIKL 577



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 171/354 (48%), Gaps = 12/354 (3%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+    N L+  LCR G    A    E +    G    V     V Y  + DG C+ G 
Sbjct: 100 PPDAALANRLVRDLCRRGRPDDA----ERVVGACGPAATV-----VAYGALTDGYCRAGR 150

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A+ +   M    + PN  TYN LIH  C      +A  +  +M+ +G  P+VV++N+
Sbjct: 151 LGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNI 207

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++   CK     +A  L++LM   G  PN   YN LMDG C  G V+ A EL  ++ S G
Sbjct: 208 LLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG 267

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           CK +  +Y+ ++ G C  +    A  L +EML +   P+   +N +   L     +++A 
Sbjct: 268 CKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAI 327

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L ++M +HG  A+   Y   I+GLC+   +  A+ L   ++    + DI  YN L+ GL
Sbjct: 328 QLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGL 387

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C + +   A EL  ++ +   + D VT+N +I  LC  G M  A ++F  M  K
Sbjct: 388 CSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 441



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/362 (30%), Positives = 171/362 (47%), Gaps = 12/362 (3%)

Query: 11  RVFG-CEP--NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           RV G C P   V  Y  L +G CR G    A  +           G+  +PN  TY  +I
Sbjct: 124 RVVGACGPAATVVAYGALTDGYCRAGRLGDARRVV---------GGMPVQPNAYTYNPLI 174

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
             LC+ G V  A  +   M      P+VVTYN L+   C    + +A  L   M  +G  
Sbjct: 175 HTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCT 234

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PN V++NV+M+ +C  G +D+A  LL  +   G +P+   YNT++ G C   R   A+EL
Sbjct: 235 PNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADEL 294

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M    C  N  +++++I   C+   ++ A+ L  +M   G   ++V YN +  GL E
Sbjct: 295 VTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCE 354

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
              V+ A  L  +M+ +G   D   Y T + GLC     V+A EL   +       D   
Sbjct: 355 QRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVT 414

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +N LI  LC+ G +  A E+F+ +P      + +TY+ +I  L    K+D+A +LF +M 
Sbjct: 415 FNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG 474

Query: 368 AK 369
            K
Sbjct: 475 HK 476



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 125/235 (53%), Gaps = 11/235 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  K++ +GC+P++ TYNTL+ GLC     + A  L + M   NG     C P+ VT
Sbjct: 361 AMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ-NG-----CLPDNVT 414

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+I  LC++G +  A E+F +M D+   PN +TY+++I G   A   ++A  LF EM 
Sbjct: 415 FNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG 474

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+ + + ++   L  +  ++EA + +  +   G+ P+  +YN ++ G C  G+  
Sbjct: 475 HKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTE 533

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            A ++   M S GC  +  +Y ILI G       EG L+   E+L K    DV++
Sbjct: 534 FAIDIMAYMVSSGCMPDDLTYVILIEGL----AYEGYLNEARELLIKLCSRDVLV 584


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/335 (30%), Positives = 177/335 (52%), Gaps = 8/335 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+V +Y TLINGLC+ G    A +LF +M    G     C+PN  TY  ++DGLCK+  
Sbjct: 43  QPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGG-----CRPNAFTYNALVDGLCKQDR 97

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A+ +  + +  +  P+VVTYN+L+         +EA   F +M ++G  P +VSFN 
Sbjct: 98  LDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNA 157

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I+  LC+  ++ +A  +   MI     PN   Y+ ++DG C + +++ A++L   M S G
Sbjct: 158 IITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEG 217

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+ ++ +Y+ L+ G+     ++ AL L   M+S+G  PDVV Y  +   L ++ +V+ A 
Sbjct: 218 CRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAH 277

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++F E+  +  + +   Y   I G C+   + E  ++ R    +    ++  YN +I GL
Sbjct: 278 EIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMRE---MACRPNVVTYNTMIWGL 334

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
               R + A+ +FR +     + D  TY  +  AL
Sbjct: 335 SMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/360 (32%), Positives = 185/360 (51%), Gaps = 15/360 (4%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYTTIID 68
           V G + N  T + ++ GLCR G    AL  F+   E+A+         +P+ V+YTT+I+
Sbjct: 3   VEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHA--------QPDVVSYTTLIN 54

Query: 69  GLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           GLCK G VD A +LF KM       PN  TYN+L+ G C  +  + A+ +  E   +   
Sbjct: 55  GLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFA 114

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+VV++N +M  L + G++DEA      M + G  P    +N ++ G C   R+  A E+
Sbjct: 115 PDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEV 174

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M       N+ +YS++I+G CK+ +++ A  L   M+S+G +PD+V Y  L +G   
Sbjct: 175 FNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSA 234

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             +++ A  L   M   G   D   Y   ID LCK G + +A E+FR L   K   ++  
Sbjct: 235 AGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVT 294

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y+ LI G C++ R+    ++ R +       +VVTYN MI  L    + ++A  +F +M 
Sbjct: 295 YSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMS 351



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 144/272 (52%), Gaps = 9/272 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A+  + R     P+V TYNTL+  L + G    AL  F +M     E G V  P  V+
Sbjct: 101 ARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMT----EEGYV--PTLVS 154

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  II GLC+   +  A E+F +M D + +PN+VTY+ +I G C ++  +EA+ L   M+
Sbjct: 155 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 214

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P++V++  ++      G++D A  LL  M+  G  P+   Y  ++D  C  GRV+
Sbjct: 215 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 274

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A E+F  + +  C  NV +YS LI GYC+   ++    +  EM     +P+VV YNT+ 
Sbjct: 275 DAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMI 331

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
            GL  + + E A+ +F EM   G   D   YR
Sbjct: 332 WGLSMVDRNEEAYGMFREMSECGFVPDARTYR 363



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 158/313 (50%), Gaps = 2/313 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELF-LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           N  T + I+ GLC+ G V +A E F   ++  +  P+VV+Y +LI+G C     + A  L
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 118 FIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           F +M+  G  +PN  ++N +++ LCK  ++D A  ++    +    P+   YNTLM    
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GRV+ A   F  M   G    + S++ +I G C+ + +  AL +++EM+ +   P++V
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y+ +  GL +  Q++ A +L D M   G   D  AY   + G    G +  A+ L R +
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+  Y  +ID LCK GR+  A E+FR L       +VVTY+ +I   C   ++
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308

Query: 357 DKARDLFLDMEAK 369
           D+   +  +M  +
Sbjct: 309 DEGGKVMREMACR 321



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 132/259 (50%), Gaps = 19/259 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A F ++   G  P + ++N +I GLCR      AL +F EM + +        PN V
Sbjct: 135 EALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFH------PNLV 188

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDGLCK   +D+A++L  +M  E   P++V Y  L+ GF  A   + A  L   M
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG  P+VV++ V++++LCK G++D+A  +   ++     PN   Y+ L+ G+C   RV
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +   ++   M  M C+ NV +Y+ +I G       E A  ++ EM   G  PD   Y  L
Sbjct: 309 DEGGKV---MREMACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365

Query: 242 FIGLFEIHQVERAFKLFDE 260
                     +RA ++ D 
Sbjct: 366 ----------KRALRMIDH 374



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 141/282 (50%), Gaps = 37/282 (13%)

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVN 182
           +G+Q N  + ++I+  LC+ G++ +A    +  +++   +P+   Y TL++G C  GRV+
Sbjct: 4   EGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVD 63

Query: 183 RAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A +LF  M  + GC+ N F+Y+ L++G CK   ++ A ++ +E   +   PDVV YNTL
Sbjct: 64  AAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTL 123

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              LF++ +V+ A   F +M   G      ++   I GLC+   + +A+E+F  +    +
Sbjct: 124 MAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDF 183

Query: 302 ELDIRAYNCLIDGLCKS-----------------------------------GRLKIAWE 326
             ++  Y+ +IDGLCKS                                   GRL  A  
Sbjct: 184 HPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALG 243

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           L R +     I DVVTY ++I  LC  G++D A ++F ++ A
Sbjct: 244 LLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVA 285


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 169/320 (52%), Gaps = 12/320 (3%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC PNVF++  ++ GLC    +  AL L   MA+  G     C PN V+Y+T+ DGL K
Sbjct: 155 LGCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGG----CLPNVVSYSTVTDGLLK 210

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G  DKA   + +M D  I PNVVTY+S+I   C     ++A  +   M+  GV PN  +
Sbjct: 211 GGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFT 270

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  C +G++ EA + LE M   GV PN   Y++ MD  C  GR   A ++F SM 
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMV 330

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGAL----SLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             G K ++ +YS L++GY     IEGAL     L+  M+   ++PD  ++NTL     + 
Sbjct: 331 KRGLKPDITTYSSLLHGYA----IEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQ 386

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +V+ A  +F +M+  G+  +   Y T I+G CK   +  A+ LF+ +       +   Y
Sbjct: 387 GKVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITY 446

Query: 309 NCLIDGLCKSGRLKIAWELF 328
           N ++ GL ++GR   A E +
Sbjct: 447 NIMLQGLFRTGRTGTAKEFY 466



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/336 (26%), Positives = 150/336 (44%), Gaps = 6/336 (1%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
            A++ F  MA        +  P   TY  +I   C  G +D        +  +      +
Sbjct: 70  AAVSRFNRMARAGAS---MVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPI 126

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
            +N L+ G C     ++A  + +  M + G  PNV S  +I+  LC   +  EA  LL +
Sbjct: 127 IFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALELLHM 186

Query: 156 MIQI--GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           M     G  PN   Y+T+ DG    G  ++A   +  M       NV +YS +I   CK 
Sbjct: 187 MADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAALCKG 246

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + ++ A+ ++  M+  G+ P+   Y +L  G     Q+  A K  ++M  +GV  +   Y
Sbjct: 247 QAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTY 306

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            +F+D LCKNG   EA ++F ++     + DI  Y+ L+ G    G L     LF  + +
Sbjct: 307 SSFMDYLCKNGRCTEARKIFYSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQ 366

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +  D   +N +I+A    GK+D+A  +F  M  +
Sbjct: 367 SDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRHQ 402



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 100/196 (51%), Gaps = 6/196 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+   G EPNV TY++ ++ LC+ G    A  +F  M           KP+  
Sbjct: 286 EAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRG------LKPDIT 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++ G   EG + +   LF  M   ++ P+   +N+LI+        +EA  +F +M
Sbjct: 340 TYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG++PN V++N ++N  CK  +M+ A  L + M+  GV PN   YN ++ G   TGR 
Sbjct: 400 RHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRT 459

Query: 182 NRAEELFVSMESMGCK 197
             A+E +V +   G K
Sbjct: 460 GTAKEFYVQIIKSGKK 475



 Score = 43.1 bits (100), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 2/116 (1%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD--IRAY 308
            E A  +FDE+ R G+ A   +    +  + ++          R  R     +   +  Y
Sbjct: 34  AEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTY 93

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             LI   C +GRL + +     + +     + + +N ++  LCAD + D A D+ L
Sbjct: 94  GILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVL 149


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 158/285 (55%), Gaps = 4/285 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +  ++   GC P+VF+YN L+ GLC    +  AL L   MA+  G+    C P+ V+Y+T
Sbjct: 156 VLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGD----CPPDVVSYST 211

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           IIDGL KEG  DKA   + +M +  I P+VVTYN+++   C A   ++A  +   M+  G
Sbjct: 212 IIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNG 271

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P+ +++N I++  C +G+  EA  +LE M   GV P+A  Y +LMD  C  GR   A 
Sbjct: 272 VMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEAR 331

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++  SM   G K NV +YS L++GY     +     L   M+  GI+PD  +++ L    
Sbjct: 332 KILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICAC 391

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            +   V+ A  +F +M++  +  D   Y T IDGLCK+G + +A+
Sbjct: 392 TKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDAM 436



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 165/350 (47%), Gaps = 17/350 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN----TVTYTTIIDGLCK 72
           P + TY  LI   CR G     L+L      G    G V K       + +T ++  LC 
Sbjct: 96  PTLHTYGILIGCCCRAGR----LDL------GFAGLGNVIKKGYRVEPIIFTPLLKSLCA 145

Query: 73  EGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG--VQPN 129
           E     A  + L+ M +    P+V +YN L+ G C+ +   EA  L   M D G    P+
Sbjct: 146 EKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPD 205

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           VVS++ I++ L K G  D+A      M++ G+ P+   YNT++   C    +++A ++  
Sbjct: 206 VVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLN 265

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   G   +  +Y+ +++GYC + + + A+ +  +M S G++PD V Y +L   L +  
Sbjct: 266 RMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNG 325

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +   A K+ D M + G+  +   Y T + G    G +VE  +L   +     + D   ++
Sbjct: 326 RCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFS 385

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            LI    K   + +A  +F  + +  L  DVVTY  +I  LC  G++D A
Sbjct: 386 ILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 3/282 (1%)

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
           +  D  + P + TY  LI   C A   +        ++ +G +   + F  ++  LC   
Sbjct: 88  RSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEK 147

Query: 145 KMDEASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVF 201
           +   A  + L  M ++G  P+ F YN L+ G C   R   A EL   M   G  C  +V 
Sbjct: 148 RTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVV 207

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           SYS +I+G  K  + + A S Y EML +GI PDVV YNT+   L +   +++A  + + M
Sbjct: 208 SYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQAMDKAMDVLNRM 267

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            ++GV  D   Y + + G C +G   EA+ +   +     E D   Y  L+D LCK+GR 
Sbjct: 268 VKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRC 327

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             A ++  S+ +  L  +V+TY+ ++H     G + + RDL 
Sbjct: 328 IEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLL 369



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 6/153 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G EP+  TY +L++ LC+ G  I A  + + M           KPN +
Sbjct: 294 EAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRG------LKPNVI 347

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T++ G   +G + + ++L   M    I P+   ++ LI       + + A  +F +M
Sbjct: 348 TYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKM 407

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
             Q + P+VV++  +++ LCK+G++D+A   LE
Sbjct: 408 RQQRLTPDVVTYGTLIDGLCKSGRVDDAMLNLE 440



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +   +   G +PNV TY+TL++G    G  +   +L + M   NG      +P+ 
Sbjct: 328 IEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVR-NG-----IQPDR 381

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
             ++ +I    K   VD A  +F KM+ + + P+VVTY +LI G C +   ++A
Sbjct: 382 HVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  196 bits (499), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 191/392 (48%), Gaps = 44/392 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PNV  Y TLI    +      A+ + +EM     E G+   P+   Y ++I GL K 
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIFCYNSLIIGLSKA 500

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D+A+   ++M +  + PN  TY + I G+  A+++  A     EM + GV PN V  
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++NE CK  K+ EA      M+  G+  +A  Y  LM+G     +V+ AEE+F  M  
Sbjct: 561 TGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +VFSY +LING+ K   ++ A S++ EM+ +G+ P+V+IYN L  G     ++E+
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L DEM   G+  +   Y T IDG CK+G + EA  LF  +++     D   Y  L+D
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740

Query: 314 GLCKSGRLKIAWELF---------RSLPRGVLI--------------------------- 337
           G C+   ++ A  +F          + P   LI                           
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800

Query: 338 --ADVVTYNIMIHALCADGKMDKARDLFLDME 367
              + VTYNIMI  LC +G ++ A++LF  M+
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 189/407 (46%), Gaps = 46/407 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +  +++   G +PN FTY   I+G         A    +EM     E GV+  PN V
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKV 558

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T +I+  CK+  V +A   +  M D+ I  +  TY  L++G    +  ++A+ +F EM
Sbjct: 559 LCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+V S+ V++N   K G M +AS + + M++ G+ PN  +YN L+ GFC +G +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+EL   M   G   N  +Y  +I+GYCK+ ++  A  L+ EM  KG+ PD  +Y TL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT--------W---------------------- 271
             G   ++ VERA  +F    + G A+ T        W                      
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797

Query: 272 ---------AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
                     Y   ID LCK G +  A ELF  ++       +  Y  L++G  K GR  
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + +F       +  D + Y+++I+A   +G   KA  L   M AK
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 187/397 (47%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           +A +L +++   G   +  TY+ LI+GL +  +   A  L  EM +              
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354

Query: 50  ---GEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
               + GV+ K              P    Y ++I+G C+E  V +  EL ++MK  NI 
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
            +  TY +++ G C + D + A  +  EM+  G +PNVV +  ++    +N +  +A R+
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M + G+ P+ F YN+L+ G     R++ A    V M   G K N F+Y   I+GY +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             E   A     EM   G+ P+ V+   L     +  +V  A   +  M   G+  D   
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKT 594

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   ++GL KN  + +A E+FR +R      D+ +Y  LI+G  K G ++ A  +F  + 
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              L  +V+ YN+++   C  G+++KA++L  +M  K
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 177/395 (44%), Gaps = 51/395 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA + +  +   G   +  TY  L+NGL +      A  +F EM  G G       P+ 
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKG-----IAPDV 627

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  +I+G  K G + KA  +F +M +E + PNV+ YN L+ GFC + +  +AK L  E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G+ PN V++  I++  CK+G + EA RL + M   G+ P++FVY TL+DG C    
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747

Query: 181 VNRAEELFVSMESMGC---------------------------------------KHNVF 201
           V RA  +F      GC                                       K N  
Sbjct: 748 VERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+I+I+  CK   +E A  L+ +M +  + P V+ Y +L  G  ++ +    F +FDE 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY-----ELDIRAYNCLIDGLC 316
              G+  D   Y   I+   K G   +A+ L   +          +L I     L+ G  
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           K G +++A ++  ++ R   I D  T   +I+  C
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 182/402 (45%), Gaps = 50/402 (12%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLF--------EEMANGNGEF----GVVCK---PNTVT 62
           +V TY+ LI   CR G+  +  ++             N +G       ++CK   P   T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +IDGLCK   ++ AK L ++M    ++ +  TY+ LI G     + + AK L  EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+      ++  +  + K G M++A  L + MI  G+ P A  Y +L++G+C    V 
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +  EL V M+      + ++Y  ++ G C + +++GA ++  EM++ G +P+VVIY TL 
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------NGYIVEAVELFRT 295
               +  +   A ++  EM+  G+A D + Y + I GL K         ++VE VE    
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519

Query: 296 LRILKYELDIRAY----------------------------NCLIDGLCKSGRLKIAWEL 327
                Y   I  Y                              LI+  CK  ++  A   
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSA 579

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +RS+    ++ D  TY ++++ L  + K+D A ++F +M  K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/348 (23%), Positives = 152/348 (43%), Gaps = 20/348 (5%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           +  L +G    G+   A+ +F      +   G+   P       ++D L +   +D   +
Sbjct: 154 FGILFDGYIAKGYIEEAVFVF------SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           ++  M + N+  +V TY+ LI   C A +    K +  +   +       + NV      
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF---RTATLNV------ 258

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
                D A +L E MI  G+ P  + Y+ L+DG C   R+  A+ L V M+S+G   +  
Sbjct: 259 -----DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +YS+LI+G  K +  + A  L  EM+S GI     +Y+     + +   +E+A  LFD M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              G+     AY + I+G C+   + +  EL   ++     +    Y  ++ G+C SG L
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             A+ + + +       +VV Y  +I     + +   A  +  +M+ +
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 39/256 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           EA  LF ++++ G  P+ F Y TL++G CR      A+ +F     G             
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774

Query: 49  -------------------NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
                              +G F    KPN VTY  +ID LCKEG ++ AKELF +M++ 
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N+ P V+TY SL++G+       E   +F E +  G++P+ + ++VI+N   K G   +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894

Query: 150 SRLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             L++ M     +  G + +      L+ GF   G +  AE++  +M  +    +  +  
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954

Query: 205 ILINGYC--KNKEIEG 218
            LIN  C   N+ +E 
Sbjct: 955 ELINESCISSNQRVEA 970



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 141/354 (39%), Gaps = 36/354 (10%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E  + +++ L   LC  G    AL++ E M   N        P    +++I+   C + F
Sbjct: 94  EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-------PVAEVWSSIVR--CSQEF 144

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V K+ +  L             +  L  G+       EA  +F   M   + P +    V
Sbjct: 145 VGKSDDGVL-------------FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKV 191

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L +  ++D    + + M++  V  +   Y+ L+   C  G V   +++    E   
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE- 250

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
                F  + L         ++GAL L   M+ KG+ P    Y+ L  GL +I ++E A 
Sbjct: 251 -----FRTATL--------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L  EM   GV+ D   Y   IDGL K      A  L   +      +    Y+C I  +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K G ++ A  LF  +    LI     Y  +I   C +  + +  +L ++M+ +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 201/402 (50%), Gaps = 43/402 (10%)

Query: 2   EAAALFMKL-RVFGCEP-NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           EA A+  ++ R  G  P + F+YN +I GL R+G    AL +F+EM     + GV   PN
Sbjct: 176 EALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMV----DRGVA--PN 229

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TY T+IDG  K G ++    L  +M  +   PNVVTYN L+ G C A   +E + L  
Sbjct: 230 QITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMD 289

Query: 120 EMMDQGVQPNVVSF-----------------------------------NVIMNELCKNG 144
           EM    + P+  ++                                   ++++N LCK+G
Sbjct: 290 EMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDG 349

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+ +A ++LE+++  G+ P   +YNTL++G+C    +  A  +F  M+S   + +  +Y+
Sbjct: 350 KVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYN 409

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LING CK + I  A  L  EM   G+ P V  +NTL        Q+E+ F +  +MQ  
Sbjct: 410 ALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDK 469

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+ ++  ++ + +   CKNG I EAV +   +       + + YN +ID   +SG  + A
Sbjct: 470 GIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQA 529

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + L   +    + A + TYN+++  LC + ++D+A +L  ++
Sbjct: 530 FLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNL 571



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 194/368 (52%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E  AL  ++  +   P+ FTY+ L +GL RTG +   L+LF E      + GV+      
Sbjct: 283 ETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESL----KKGVII--GAY 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +++GLCK+G V KA+++   +    + P    YN+LI+G+C   D   A  +F +M
Sbjct: 337 TCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQM 396

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +++N ++N LCK   + EA  L+  M + GV P+   +NTL+D +   G++
Sbjct: 397 KSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQL 456

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +   +   M+  G K NV S+  ++  +CKN +I  A+++  +M+ K + P+  +YN++
Sbjct: 457 EKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSI 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E    E+AF L ++M+  GV+A  + Y   + GLCKN  I EA EL   L     
Sbjct: 517 IDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGL 576

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +YN +I   C  G    A EL + + +  +   + TY+ ++ AL + G++     
Sbjct: 577 RPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMEC 636

Query: 362 LFLDMEAK 369
           L+  M  K
Sbjct: 637 LYQHMVHK 644



 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 177/362 (48%), Gaps = 4/362 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A F  L   G  P+ F +N  +      G    AL +   M    G       P+  +Y 
Sbjct: 144 AAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGRSEG----APPPDAFSYN 199

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I GL + G    A ++F +M D  + PN +TYN++I G     D      L  +M+  
Sbjct: 200 VVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQD 259

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G +PNVV++NV+++ LC+ G+MDE   L++ M    + P+ F Y+ L DG   TG     
Sbjct: 260 GRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTM 319

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF      G     ++ SIL+NG CK+ ++  A  +   ++  G+ P   IYNTL  G
Sbjct: 320 LSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLING 379

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             ++  ++ AF +F++M+   +  D   Y   I+GLCK   I EA +L   +     +  
Sbjct: 380 YCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPS 439

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  +N LID   ++G+L+  + +   +    + ++V+++  ++ A C +GK+ +A  +  
Sbjct: 440 VETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILD 499

Query: 365 DM 366
           DM
Sbjct: 500 DM 501



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 170/359 (47%), Gaps = 16/359 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----CKPNTVTYTTIIDGLCK 72
           P++ + N L+  L   G            A+    FG++     +P+T  +   +     
Sbjct: 121 PSLSSCNLLLESLLSVG----------RHADVRAAFGLLVAAGARPDTFAWNKAVQACVA 170

Query: 73  EGFVDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            G +D+A  +  +M   +    P+  +YN +I G   +   ++A  +F EM+D+GV PN 
Sbjct: 171 AGDLDEALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQ 230

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           +++N +++   K G ++   RL + M+Q G +PN   YN L+ G C  GR++    L   
Sbjct: 231 ITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDE 290

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M S     + F+YSIL +G  +  +    LSL+ E L KG+       + L  GL +  +
Sbjct: 291 MTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGK 350

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V +A ++ + +   G+   T  Y T I+G C+   +  A  +F  ++      D   YN 
Sbjct: 351 VAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNA 410

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI+GLCK   +  A +L   + +  +   V T+N +I A    G+++K   +  DM+ K
Sbjct: 411 LINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDK 469


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 182/348 (52%), Gaps = 7/348 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y  LI+ LC+ G+   A  L   M           K   + Y+TII+ LCK   V++A+E
Sbjct: 48  YGILISCLCKVGNFDEAYKLLHTMRLKR------FKRKAIAYSTIINWLCKLNRVEEARE 101

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           L  KM      P+ +TY  ++   C     ++A     EM  +G++P+   +N +++ LC
Sbjct: 102 LIEKMA-RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLC 160

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           +  K++EA  L E M++  + PN   YNTL++G C   R+  A ELF  M   G      
Sbjct: 161 QEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEV 220

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           SY+ LI+G+CK K++  A  ++ +M+     P+VV Y TL  GL +  +V+ A ++ D M
Sbjct: 221 SYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGM 280

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            + GV  +   Y   IDG CK   + EA +L   +        +  YN L++ LC++ +L
Sbjct: 281 VKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKL 340

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + A++LFR + +      VVTYN ++ ALC   ++D A  L+ +M AK
Sbjct: 341 EDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 388



 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 183/366 (50%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +R+   +     Y+T+IN LC+      A  L E+MA           P+ +
Sbjct: 63  EAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-------YAPPDAL 115

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I++ LCK   +D A     +M    I P+   YN ++ G C      EA+ LF +M
Sbjct: 116 TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 175

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q + PNVV++N ++N LCK  +++ A  L + M   G  P    YNTL+DGFC    +
Sbjct: 176 VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 235

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+++F  M    C  NV +Y+ LI+G  K+ +++ A  +   M+ KG+ P+V  Y+ L
Sbjct: 236 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 295

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ +V+ A KL ++M   G+A     Y   ++ LC+   + +A +LFR +   + 
Sbjct: 296 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 355

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  YN L+  LC   +L  A  L+  +       D +TY+ +   L   GK+ +A++
Sbjct: 356 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 415

Query: 362 LFLDME 367
           L   M+
Sbjct: 416 LMEKMK 421



 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 162/299 (54%), Gaps = 6/299 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A   ++   G +P+ F YN +++GLC+      A  LFE+M            PN V
Sbjct: 132 DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR------INPNVV 185

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GLCK   ++ A ELF +M  +   P  V+YN+LI GFC   D   AK +F +M
Sbjct: 186 TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 245

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PNVV++  +++ L K+GK+  A+ +L+ M++ GV PN   Y+ L+DGFC   RV
Sbjct: 246 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 305

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M + G    V +Y+IL+N  C+  ++E A  L+  M  +   P VV YNTL
Sbjct: 306 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 365

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
              L    Q++ A +L+ EM   G   D   Y T   GL + G + EA EL   +++ K
Sbjct: 366 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 424



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/347 (31%), Positives = 163/347 (46%), Gaps = 36/347 (10%)

Query: 58  PNTVTYTTIIDG-----------------------------------LCKEGFVDKAKEL 82
           P   T+ T+ DG                                   LCK G  D+A +L
Sbjct: 8   PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
              M+ +      + Y+++I+  C  N   EA+ L IE M +   P+ +++  I+  LCK
Sbjct: 68  LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEAREL-IEKMARYAPPDALTYGPIVERLCK 126

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
             ++D+A   +E M   G++P+AF+YN ++ G C   +V  A  LF  M       NV +
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+ LING CK   IE A  L+ EM  KG  P  V YNTL  G  +   +  A  +FD+M 
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           R     +   Y T IDGL K+G +  A E+   +       ++  Y+CLIDG CK  R+ 
Sbjct: 247 RSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVD 306

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A +L   +    +   VVTYNI++++LC   K++ A  LF  M  +
Sbjct: 307 EAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 353



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 125/283 (44%), Gaps = 34/283 (12%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + V P   +FN + +   K G++++   + + M++ G    A  Y  L+   C  G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILIN-------------------------------- 208
            + A +L  +M     K    +YS +IN                                
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPI 120

Query: 209 --GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
               CK K I+ AL+   EM ++GIKPD  IYN +  GL +  +VE A  LF++M +  +
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +   Y T I+GLCK   I  A ELF+ +    Y     +YN LIDG CK   L  A +
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +F  + R   + +VVTY  +I  L   GK+  A ++   M  K
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKK 283



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A  LF  +    C P V TYNTL+  LC       A  L+ EM A G       C P+ 
Sbjct: 342 DAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG-------CPPDA 394

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
           +TY T+  GL + G V +A+EL  KMK    NP
Sbjct: 395 ITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 427


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 188/352 (53%), Gaps = 7/352 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ + N+L+N L + G T  A  ++++M       G+V  P+    + +++  CK+G V
Sbjct: 155 PSLRSCNSLLNNLVKNGETHTAHYVYQQMI----RVGIV--PDVFMVSIMVNAFCKDGKV 208

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A     KM++  + PN+VTY+SLI+G+    D   AK +   M ++GV  NVV++ ++
Sbjct: 209 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 268

Query: 137 MNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +   CK  KMDEA ++L  M +   + P+   Y  L+DG+C TG+++ A  L   M  +G
Sbjct: 269 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 328

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K N+F  + LINGYCK  EI  A  + + M+   +KPD   YNTL  G         AF
Sbjct: 329 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 388

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L D+M + G+      Y T + GLC+ G   +A++++  +       D   Y+ L+DGL
Sbjct: 389 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 448

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            K    + A  L++ +         +T+N MI  LC  GKM +A ++F  M+
Sbjct: 449 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 500



 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 30/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EAA    K+   G EPN+ TY++LING    G    A  + + M+       VV      
Sbjct: 210 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 269

Query: 56  ------CK------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                 CK                  P+   Y  +IDG C+ G +D A  L  +M    +
Sbjct: 270 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 329

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
             N+   NSLI+G+C   + +EA+ +   M+D  ++P+  S+N +++  C+ G   EA  
Sbjct: 330 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 389

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L + M+Q G+ P    YNTL+ G C  G  + A +++  M   G   +   YS L++G  
Sbjct: 390 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 449

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K +  EGA +L+ ++L++G     + +NT+  GL ++ ++  A ++FD+M+  G + D  
Sbjct: 450 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 509

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            YRT IDG CK   + +A ++   +        I  YN LI GL KS RL    +L   +
Sbjct: 510 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 569

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               L  ++VTY  +I   C +G +DKA   + +M
Sbjct: 570 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 604



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 199/435 (45%), Gaps = 73/435 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++  +  +P+ ++YNTL++G CR GHT  A NL ++M     E      P  +
Sbjct: 351 EAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIE------PTVL 404

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ GLC+ G  D A +++  M    + P+ V Y++L+ G     ++  A  L+ ++
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   + ++FN +++ LCK GKM EA  + + M  +G  P+   Y TL+DG+C    V
Sbjct: 465 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 524

Query: 182 NRA-----------------------------------EELFVSMESMGCKHNVFSYSIL 206
            +A                                    +L   M   G   N+ +Y  L
Sbjct: 525 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 584

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G+CK   ++ A S Y EM   G+  +++I +T+  GL+ + +++ A  L  +M  HG 
Sbjct: 585 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644

Query: 267 AADTWAY---------------------RTF-----------IDGLCKNGYIVEAVELFR 294
             D   +                     +TF           I GLCK G + +A   F 
Sbjct: 645 FPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS 704

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            L +  +  D   Y  LI G   +G +  A+ L   + R  L+ ++VTYN +I+ LC   
Sbjct: 705 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSE 764

Query: 355 KMDKARDLFLDMEAK 369
            +D+A+ LF  +  K
Sbjct: 765 NVDRAQRLFHKLHQK 779



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 170/357 (47%), Gaps = 38/357 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+ L+  +   G   +  T+NT+I+GLC+ G  + A  +F++M +      + C P+ +T
Sbjct: 457 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD------LGCSPDGIT 510

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG CK   V +A ++   M+ E I+P++  YNSLI G   +    E   L  EM 
Sbjct: 511 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 570

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN+V++  +++  CK G +D+A      M + G+  N  + +T++ G    GR++
Sbjct: 571 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 630

Query: 183 RAEELFVSMESMG----------------------------CK----HNVFSYSILINGY 210
            A  L   M   G                            CK     N   Y+I I G 
Sbjct: 631 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 690

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ A   +S +  KG  PD   Y TL  G      V+ AF+L DEM R G+  + 
Sbjct: 691 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 750

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
             Y   I+GLCK+  +  A  LF  L       ++  YN LIDG CK G +  A++L
Sbjct: 751 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKL 807



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 155/329 (47%), Gaps = 61/329 (18%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN-------------------- 40
           +EA  +F K++  GC P+  TY TLI+G C+  +   A                      
Sbjct: 490 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSL 549

Query: 41  ---LFE-----EMANGNGEFGVV-CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
              LF+     E+ +   E G+    PN VTY  +IDG CKEG +DKA   + +M +  +
Sbjct: 550 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 609

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-------------------------- 125
           + N++  ++++ G       +EA  L  +M+D G                          
Sbjct: 610 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 669

Query: 126 ------VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
                 + PN + +N+ +  LCK GK+D+A R   ++   G  P+ F Y TL+ G+   G
Sbjct: 670 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 729

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V+ A  L   M   G   N+ +Y+ LING CK++ ++ A  L+ ++  KG+ P+VV YN
Sbjct: 730 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 789

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           TL  G  +I  ++ AFKL D+M   G++ 
Sbjct: 790 TLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 154/306 (50%), Gaps = 1/306 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +   +  I+    ++G    A  +F  M      P++ + NSL++      + + A  ++
Sbjct: 121 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 180

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  G+ P+V   ++++N  CK+GK+DEA+  ++ M  +GV PN   Y++L++G+   
Sbjct: 181 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 240

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVI 237
           G V  A+ +   M   G   NV +Y++LI GYCK  +++ A  +   M  +  + PD   
Sbjct: 241 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 300

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G     +++ A +L DEM R G+  + +   + I+G CK G I EA  +   + 
Sbjct: 301 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 360

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D  +YN L+DG C+ G    A+ L   + +  +   V+TYN ++  LC  G  D
Sbjct: 361 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 420

Query: 358 KARDLF 363
            A  ++
Sbjct: 421 DALQIW 426



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 55/331 (16%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD----------------------- 123
           K +N  PNV +Y  L+H       ++E +    +++D                       
Sbjct: 60  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFA 119

Query: 124 ---------------QGVQPNVV----------------SFNVIMNELCKNGKMDEASRL 152
                          +G+  N +                S N ++N L KNG+   A  +
Sbjct: 120 FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 179

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI++G+ P+ F+ + +++ FC  G+V+ A      ME++G + N+ +Y  LINGY  
Sbjct: 180 YQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS 239

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH-GVAADTW 271
             ++E A  +   M  KG+  +VV Y  L  G  +  +++ A K+   MQ    +  D  
Sbjct: 240 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 299

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           AY   IDG C+ G I +AV L   +  L  + ++   N LI+G CK G +  A  +   +
Sbjct: 300 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 359

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDL 362
               L  D  +YN ++   C +G   +A +L
Sbjct: 360 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNL 390



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 83/143 (58%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN + Y   I GLCK G VD A+  F  +  +   P+  TY +LIHG+  A + +EA  L
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 737

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM+ +G+ PN+V++N ++N LCK+  +D A RL   + Q G+ PN   YNTL+DG+C 
Sbjct: 738 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 797

Query: 178 TGRVNRAEELFVSMESMGCKHNV 200
            G ++ A +L   M   G   ++
Sbjct: 798 IGNMDAAFKLKDKMIEEGISPSI 820


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  196 bits (498), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/410 (29%), Positives = 190/410 (46%), Gaps = 64/410 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG-----NGEFGVVC------------ 56
           G  PN  T N+LI G C++     A +L EEM  G      G F  V             
Sbjct: 332 GISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSA 391

Query: 57  ------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                       KPN    T ++ GLC+ G   +A EL+ ++ ++    N VT N+LIHG
Sbjct: 392 LLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHG 451

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C A    EA  L  EM+++G+  + +S+N ++   CK GK++E  +L E M++ G++P+
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511

Query: 165 AFVYNTLM-----------------------------------DGFCLTGRVNRAEELFV 189
            + YN L+                                   DG+C   RV   E+LF 
Sbjct: 512 MYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQ 571

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M +M  + N   Y  LI  YC+N  +  A  L  +M S+GI      Y++L  GL  I 
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            V+ A +L DEM++ G++ +   Y   I G CK G + +   + + + I     +   Y 
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +I+G CK G +K A +L   + +  ++ D VTYN + +  C +GKM++A
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEA 741



 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/350 (32%), Positives = 188/350 (53%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V+ ++T++N  C  G    A+ LF +M     + GV   PN VTY  II GLCK 
Sbjct: 192 GVTPDVYLFSTMVNAFCTGGRVDDAIELFRKME----KVGVA--PNVVTYNNIIHGLCKN 245

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A +   KM+ E + P++VTY  LI+G      ++EA C+  EM D+G  PN V +
Sbjct: 246 GRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVY 305

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C+ G +  A ++ + MI  G+ PN+   N+L+ G+C + ++  AE L   M +
Sbjct: 306 NTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLT 365

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  +++ +I+  C     + AL    EML +  KP+  +   L  GL +  +   
Sbjct: 366 GGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSE 425

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L+  +   G AA+T      I GLC+ G   EA +L + +      LD  +YN LI 
Sbjct: 426 AIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLIL 485

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             CK G+++  ++L   + R  +  D+ TYN+++H LC  GK+++A  L+
Sbjct: 486 ACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW 535



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/403 (30%), Positives = 188/403 (46%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G  PNV TYN +I+GLC+ G    A    E+M           KP+ V
Sbjct: 215 DAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKER------VKPSLV 268

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GL K    D+A  +  +M D    PN V YN+LI G+C   + + A  +  +M
Sbjct: 269 TYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDM 328

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--------------------- 160
           +  G+ PN V+ N ++   CK+ +M+ A  LLE M+  G                     
Sbjct: 329 ISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRF 388

Query: 161 --------------VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                          +PN  +   L+ G C  G+ + A EL+  +   G   N  + + L
Sbjct: 389 DSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNAL 448

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G C+    E A  L  EML +G+  D + YNTL +   +  +VE  FKL +EM R G+
Sbjct: 449 IHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGI 508

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D + Y   + GLC  G I EA  L+   +      D   Y  +IDG CK+ R++   +
Sbjct: 509 QPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEK 568

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF+ +    +  + V Y  +I A C +G M +A  L  DM ++
Sbjct: 569 LFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSR 611



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 170/346 (49%), Gaps = 6/346 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ +L   G   N  T N LI+GLC  G    A  L +EM     E G+V   +++
Sbjct: 425 EAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEML----ERGLVL--DSI 478

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I   CKEG V++  +L  +M    I P++ TYN L+HG C      EA  L+ E 
Sbjct: 479 SYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHEC 538

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+  ++ ++++  CK  +++E  +L + M+ + +  NA VY TL+  +C  G +
Sbjct: 539 KKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNM 598

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M S G      +YS LI+G      ++ A  L  EM  +G+ P+VV Y  L
Sbjct: 599 REAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTAL 658

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ Q+ +   +  EM  + V  +   Y   I+G CK G +  A +L   +     
Sbjct: 659 IGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGI 718

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
             D   YN L +G CK G+++ A ++   +  G +  D +TY  +I
Sbjct: 719 VPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLI 764



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/316 (31%), Positives = 153/316 (48%), Gaps = 6/316 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++   G   +  +YNTLI   C+ G       L EEM       G+  +P+  
Sbjct: 460 EAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMV----RRGI--QPDMY 513

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GLC  G +++A  L+ + K     P+  TY  +I G+C AN   E + LF EM
Sbjct: 514 TYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEM 573

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   ++ N V +  ++   C+NG M EA RL + M   G+   +  Y++L+ G    G V
Sbjct: 574 VTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLV 633

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M   G   NV  Y+ LI GYCK  ++    S+  EM    + P+ + Y  +
Sbjct: 634 DSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIM 693

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  ++ A KL +EM + G+  D   Y    +G CK G + EA+++   +     
Sbjct: 694 INGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGI 753

Query: 302 ELDIRAYNCLIDGLCK 317
            LD   Y  LIDG  K
Sbjct: 754 SLDDITYTTLIDGWHK 769



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/330 (30%), Positives = 163/330 (49%), Gaps = 6/330 (1%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           V   LF  +AN  G F     P+  T   ++  L K   V  + ++F  M    + P+V 
Sbjct: 145 VVFELFSLLAN-KGLF-----PSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVY 198

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
            ++++++ FC     ++A  LF +M   GV PNVV++N I++ LCKNG++DEA +  E M
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            +  V+P+   Y  L++G     R + A  +   M   G   N   Y+ LI+GYC+   I
Sbjct: 259 EKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             AL +  +M+S GI P+ V  N+L  G  + +Q+E A  L +EM   G   +   + + 
Sbjct: 319 STALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV 378

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I  LC       A+     + +  ++ +      L+ GLC++G+   A EL+  L     
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGF 438

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A+ VT N +IH LC  G  ++A  L  +M
Sbjct: 439 AANTVTSNALIHGLCEAGSKEEAAKLLKEM 468



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 22/77 (28%), Positives = 41/77 (53%)

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           ELF  L        ++  N L+  L K+  +K+++++F  +    +  DV  ++ M++A 
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 351 CADGKMDKARDLFLDME 367
           C  G++D A +LF  ME
Sbjct: 208 CTGGRVDDAIELFRKME 224


>gi|224128023|ref|XP_002329235.1| predicted protein [Populus trichocarpa]
 gi|222871016|gb|EEF08147.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 190/365 (52%), Gaps = 31/365 (8%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L   + + G  PN +T N LIN  C+  H  +  ++  ++     + G+  +P+ V +T
Sbjct: 106 SLSRPMELAGLSPNTYTLNILINCFCKLQHVDLGFSVLAKVI----KLGL--QPDVVPFT 159

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+GLCK G   +A ELF    DE +      YNSLIHG C  + W EA  +  EM   
Sbjct: 160 TLINGLCKVGKFSQAVELF----DETVERG---YNSLIHGLCNCSQWKEASAILNEMTSL 212

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            + P++V+FNV+++  CK GK+ EA  +L+ M ++ V  +   YN+LM G  L   V  A
Sbjct: 213 NIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTMTEMSVELDVVTYNSLMYGHSLWMEVVEA 272

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            +LF  M + GCK NVFSY+ILINGYCK + I+ A  L++EM+ +G+ P++V YNT   G
Sbjct: 273 RKLFGFMITKGCKPNVFSYNILINGYCKAEMIDEAKQLFNEMIHQGLTPNIVSYNTH--G 330

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             ++ ++  A +L + M  +G   D   Y   +DG CK G  + A +LF        EL 
Sbjct: 331 FCQLGKLREAQELNENMHTNGNLPDLCTYSILLDGFCKQGNHIAARKLFS-------ELF 383

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           ++    L+D          A E FR +       +  +YN++I          +A  L  
Sbjct: 384 VQGLQRLLDE---------ALETFRKMEEDGCPPNEWSYNVIIRGFLRHRDESRAVQLIG 434

Query: 365 DMEAK 369
           +M  +
Sbjct: 435 EMRDR 439



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 159/330 (48%), Gaps = 45/330 (13%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG--NGEFGVVCK----- 57
           ++  K+   G +P+V  + TLINGLC+ G    A+ LF+E      N     +C      
Sbjct: 141 SVLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVERGYNSLIHGLCNCSQWK 200

Query: 58  ---------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 102
                          P+ VT+  ++D  CKEG V +A+ +   M + ++  +VVTYNSL+
Sbjct: 201 EASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTMTEMSVELDVVTYNSLM 260

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
           +G     +  EA+ LF  M+ +G +PNV S+N+++N  CK   +DEA +L   MI  G+ 
Sbjct: 261 YGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGYCKAEMIDEAKQLFNEMIHQGLT 320

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN   YNT   GFC  G++  A+EL  +M + G   ++ +YSIL++G+CK      A  L
Sbjct: 321 PNIVSYNT--HGFCQLGKLREAQELNENMHTNGNLPDLCTYSILLDGFCKQGNHIAARKL 378

Query: 223 YSEMLSKGIK-------------------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +SE+  +G++                   P+   YN +  G        RA +L  EM+ 
Sbjct: 379 FSELFVQGLQRLLDEALETFRKMEEDGCPPNEWSYNVIIRGFLRHRDESRAVQLIGEMRD 438

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            G         + ++ L  NG    + E+F
Sbjct: 439 RGRC--RCGDHSLVEDLLSNGRQCCSEEVF 466



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 150/310 (48%), Gaps = 10/310 (3%)

Query: 58  PNTVTYTTIIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           P  + +T ++  + K   + D    L   M+   ++PN  T N LI+ FC     +    
Sbjct: 82  PCIIQFTKLLSAIVKMRQYYDAVISLSRPMELAGLSPNTYTLNILINCFCKLQHVDLGFS 141

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +  +++  G+QP+VV F  ++N LCK GK  +A  L +  ++ G       YN+L+ G C
Sbjct: 142 VLAKVIKLGLQPDVVPFTTLINGLCKVGKFSQAVELFDETVERG-------YNSLIHGLC 194

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              +   A  +   M S+    ++ ++++L++ +CK  ++  A  +   M    ++ DVV
Sbjct: 195 NCSQWKEASAILNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAQGVLKTMTEMSVELDVV 254

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN+L  G     +V  A KLF  M   G   + ++Y   I+G CK   I EA +LF  +
Sbjct: 255 TYNSLMYGHSLWMEVVEARKLFGFMITKGCKPNVFSYNILINGYCKAEMIDEAKQLFNEM 314

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  +I +YN    G C+ G+L+ A EL  ++     + D+ TY+I++   C  G  
Sbjct: 315 IHQGLTPNIVSYN--THGFCQLGKLREAQELNENMHTNGNLPDLCTYSILLDGFCKQGNH 372

Query: 357 DKARDLFLDM 366
             AR LF ++
Sbjct: 373 IAARKLFSEL 382



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 28/220 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   GC+PNVF+YN LING C+      A  LF EM +          PN 
Sbjct: 270 VEARKLFGFMITKGCKPNVFSYNILINGYCKAEMIDEAKQLFNEMIHQG------LTPNI 323

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y T   G C+ G + +A+EL   M      P++ TY+ L+ GFC   +   A+ LF E
Sbjct: 324 VSYNT--HGFCQLGKLREAQELNENMHTNGNLPDLCTYSILLDGFCKQGNHIAARKLFSE 381

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  QG+Q                  +DEA      M + G  PN + YN ++ GF     
Sbjct: 382 LFVQGLQ----------------RLLDEALETFRKMEEDGCPPNEWSYNVIIRGFLRHRD 425

Query: 181 VNRAEELFVSMESMG---CKHNVFSYSILING-YCKNKEI 216
            +RA +L   M   G   C  +     +L NG  C ++E+
Sbjct: 426 ESRAVQLIGEMRDRGRCRCGDHSLVEDLLSNGRQCCSEEV 465


>gi|357498031|ref|XP_003619304.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494319|gb|AES75522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 805

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/361 (33%), Positives = 181/361 (50%), Gaps = 28/361 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPN  T  TLI GLC  G    AL LF +     G F +    N VTY  +I+GLCK 
Sbjct: 256 GYEPNTITLTTLIKGLCLNGKVNEAL-LFHDHVLALG-FHL----NHVTYGILINGLCKM 309

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A ++  +++ + +N NVV Y+++I G C      +A  L+ EM+ + + P VV+F
Sbjct: 310 GQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVVTF 369

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-- 191
                         +A  L   M+   + PN + +N L+D  C  G++  A+ + + M  
Sbjct: 370 --------------KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVD 415

Query: 192 ------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
                   M CK N  SY+ LI+G+CK+  +  A  L  +M  +G  P+V+ YN+L   L
Sbjct: 416 EALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHAL 475

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            + H V++A  L +  +  G+  D   Y T +DGLCK G + +A  +F+ L I  Y L  
Sbjct: 476 CKNHHVDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPT 535

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I+GLC  G L  A  L   +     I DVVTY  +IHAL    + DKA  L  +
Sbjct: 536 WTYNIMINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRE 595

Query: 366 M 366
           +
Sbjct: 596 L 596



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 135/239 (56%), Gaps = 20/239 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG------HTIV-----ALNLFEEMANGNG 50
           +A +LF ++ +    PNV+T+N L++ LC+ G      + I+     ALNLF EM     
Sbjct: 370 KAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMH---- 425

Query: 51  EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
                CKPNTV+Y T+IDG CK G +  A +L  +M+D    PNV+TYNSL+H  C  + 
Sbjct: 426 -----CKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHH 480

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
            ++A  L     DQG+QP++ ++N +++ LCK G++ +A  + + ++  G     + YN 
Sbjct: 481 VDKAIALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNI 540

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           +++G CL G ++ AE L   ME  GC  +V +Y  +I+   +  E + A  L  E++ +
Sbjct: 541 MINGLCLEGLLDEAETLLSKMEDNGCIPDVVTYQTIIHALFEKDENDKAEKLVRELIVR 599



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/378 (27%), Positives = 161/378 (42%), Gaps = 86/378 (22%)

Query: 58  PNTVTYTTIIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           P+ V +  I+  L K +        L  +M+ + + P++ T + LI+            C
Sbjct: 203 PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILIN------------C 250

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            + +M   G +PN ++   ++  LC NGK++EA    + ++ +G   N   Y  L++G C
Sbjct: 251 YYFKM---GYEPNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC 307

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G+   A ++   +E      NV  YS +I+G CK+K +  A  LYSEM+ K I P VV
Sbjct: 308 KMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVKRIPPTVV 367

Query: 237 IY---------------------NTLFIGLFE-----------IHQVERAFKLFDEMQRH 264
            +                     N L   L +           I  V+ A  LF EM   
Sbjct: 368 TFKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAKNVIIKMVDEALNLFTEMH-- 425

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-------ILKY---------------- 301
               +T +Y T IDG CK+G +  A +L   +R       ++ Y                
Sbjct: 426 -CKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVITYNSLLHALCKNHHVDKA 484

Query: 302 ------------ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
                       + D+  YN L+DGLCK GRLK A  +F+ L          TYNIMI+ 
Sbjct: 485 IALVNNFKDQGIQPDMHTYNTLVDGLCKQGRLKDAQLIFQDLLIKGYNLPTWTYNIMING 544

Query: 350 LCADGKMDKARDLFLDME 367
           LC +G +D+A  L   ME
Sbjct: 545 LCLEGLLDEAETLLSKME 562



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 146/317 (46%), Gaps = 46/317 (14%)

Query: 74  GFV-DKAKELFLKMKDENINPNVVTYNS-LIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           GFV D A   F +M      P++V +N  L +     N +     L  +M  +GV+P++ 
Sbjct: 183 GFVVDNAVLSFNRMLQMRHTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLF 242

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           + ++++N  C   KM             G  PN     TL+ G CL G+VN A      +
Sbjct: 243 TLSILIN--CYYFKM-------------GYEPNTITLTTLIKGLCLNGKVNEALLFHDHV 287

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF--------- 242
            ++G   N  +Y ILING CK  +   AL +  ++  K +  +VV+Y+T+          
Sbjct: 288 LALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTVIDGLCKDKLV 347

Query: 243 ---IGLFEIHQVER---------AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
               GL+    V+R         AF LF EM    +  + + +   +D LCK+G I EA 
Sbjct: 348 IDAYGLYSEMIVKRIPPTVVTFKAFSLFHEMVLKNINPNVYTFNILVDALCKDGKIKEAK 407

Query: 291 --------ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
                   E       +  + +  +YN LIDG CKSGRL  AW+L   +       +V+T
Sbjct: 408 NVIIKMVDEALNLFTEMHCKPNTVSYNTLIDGFCKSGRLSHAWKLLDQMRDRGQPPNVIT 467

Query: 343 YNIMIHALCADGKMDKA 359
           YN ++HALC +  +DKA
Sbjct: 468 YNSLLHALCKNHHVDKA 484



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 102/222 (45%), Gaps = 25/222 (11%)

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           ++ +L L +Q     N   + ++ +GF     V+ A   F  M  M    ++  ++ ++ 
Sbjct: 163 SNAVLRLTVQ-----NCSHFRSIPNGFV----VDNAVLSFNRMLQMRHTPSIVEFNKILT 213

Query: 209 GYCKNK-EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
              K K      LSL ++M SKG+KPD+   + L    +        FK+       G  
Sbjct: 214 YLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYY--------FKM-------GYE 258

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +T    T I GLC NG + EA+     +  L + L+   Y  LI+GLCK G+ + A ++
Sbjct: 259 PNTITLTTLIKGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQV 318

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            R +   ++  +VV Y+ +I  LC D  +  A  L+ +M  K
Sbjct: 319 LRQIEGKLVNTNVVMYSTVIDGLCKDKLVIDAYGLYSEMIVK 360


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 182/362 (50%), Gaps = 10/362 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++   GC P V TY  L+ GLCR            +        G V + N V
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCRV----------RQADEARAMLGRVPELNVV 312

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T+I G   EG + +A EL+  M  +   P+  TY+ L+HG C     + A  L  EM
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREM 372

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNVV++ ++++  CKNG  D+   LLE M   G+  N+  YN ++   C  GR+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M S GC  ++ SY+ +I   C N+++E A  ++  +L +G+  + + YNT+
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    + + A +L  EM  HG + D  +Y   I  +CK+G +  ++ L   +     
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +  +YN LI  LCK  R++ A EL + +    L  D+VTYN +I+ LC  G M  A +
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612

Query: 362 LF 363
           L 
Sbjct: 613 LL 614



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 178/368 (48%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +   GC P+   Y T+I+ LC  G    A  L  EM        + C  +  
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM------LLMGCAADVN 246

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ G+C  G V +A  L  +M  +   P V+TY  L+ G C     +EA+     M
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA----M 302

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV FN ++      GK+ EA+ L E M   G +P+A  Y+ LM G C  GR+
Sbjct: 303 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   ME  G   NV +Y+I+++ +CKN   +   +L  EM +KG+  +   YN +
Sbjct: 363 SSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +++ A  L  EM+  G   D  +Y T I  LC N  + EA  +F  L     
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN +I  L + GR + A  L + +       DVV+YN +I A+C DG +D++  
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 362 LFLDMEAK 369
           L  +M  K
Sbjct: 543 LLEEMAEK 550



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 174/350 (49%), Gaps = 10/350 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P  FT+      LCR G    AL L   MA         C P+ V Y T+I  LC +G V
Sbjct: 173 PTTFTFGVAARALCRLGRANEALALLRGMARHG------CVPDAVLYQTVIHALCDQGGV 226

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  L  +M       +V T++ ++ G C      EA  L   MM +G  P V+++  +
Sbjct: 227 TEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFL 286

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC+  + DEA  +L  + ++    N  ++NT++ G    G++  A EL+ +M   GC
Sbjct: 287 LQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKGC 342

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +  +YSIL++G CK   I  A+ L  EM  KG  P+VV Y  +     +    +    
Sbjct: 343 QPDAHTYSILMHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRA 402

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L +EM   G+  ++  Y   I  LCK+G + EA+ L + +R      DI +YN +I  LC
Sbjct: 403 LLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLC 462

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +++ A  +F +L    ++A+ +TYN +IHAL  DG+   A  L  +M
Sbjct: 463 NNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 512



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 149/327 (45%), Gaps = 41/327 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+  + + GC+P+  TY+ L++GLC+ G    A+ L  EM            PN V
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEKKG------FAPNVV 382

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++   CK G  D  + L  +M  + +  N   YN +I+  C     +EA  L  EM
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT----------- 170
             QG  P++ S+N I+  LC N +M+EA  + E +++ GV  N   YNT           
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 502

Query: 171 ------------------------LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                   L+   C  G V+R+  L   M   G K N  SY+IL
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 562

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+  CK + +  AL L  +ML++G+ PD+V YNTL  GL ++  +  A  L +++    V
Sbjct: 563 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 622

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELF 293
             D   Y   I   CK   + +A  L 
Sbjct: 623 HPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 155/333 (46%), Gaps = 10/333 (3%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVV 96
           AL+L +++      FGV  +P+  +Y  ++  L +      A  L+ +M   + + P   
Sbjct: 122 ALHLLDQLPR---RFGV--QPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTF 176

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           T+       C     NEA  L   M   G  P+ V +  +++ LC  G + EA+ LL  M
Sbjct: 177 TFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM 236

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           + +G   +   ++ ++ G C  GRV  A  L   M + GC   V +Y  L+ G C+ ++ 
Sbjct: 237 LLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQA 296

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A +    ML +  + +VV++NT+  G     ++  A +L++ M   G   D   Y   
Sbjct: 297 DEARA----MLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSIL 352

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           + GLCK G I  AV L R +    +  ++  Y  ++   CK+G       L   +    L
Sbjct: 353 MHGLCKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGL 412

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +   YN MI+ALC DG+MD+A  L  +M ++
Sbjct: 413 TLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQ 445



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 126/227 (55%), Gaps = 6/227 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++R  GC P++ +YNT+I  LC       A ++FE +     E GVV   N +
Sbjct: 434 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL----EEGVVA--NGI 487

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TII  L ++G    A  L  +M     + +VV+YN LI   C   + + +  L  EM
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++PN VS+N++++ELCK  ++ +A  L + M+  G+ P+   YNTL++G C  G +
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + A  L   + +     ++ +Y+ILI+ +CK + ++ A  L +  ++
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 654


>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
          Length = 645

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 195/383 (50%), Gaps = 25/383 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  ++  G +PN +TYN L++G C+      A+ L++E+            PN V
Sbjct: 239 DAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSG------LNPNAV 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +TT+IDG CK     +AK +FL+M    + P V  YNSL+ G   + +  EA  L+ EM
Sbjct: 293 IFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEM 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P+  + ++++  LC  G+M  A R L+ + + GV  NA  YN L+D +C  G +
Sbjct: 353 TRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNL 412

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A      M  +G + NV SYS LI+G+ K  +++ A+++Y+EM++KGI+P+VV Y  L
Sbjct: 413 EEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTAL 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ AF+L  EM  +G++ +       +DGLC+   + EAV        LK 
Sbjct: 473 IHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKC 532

Query: 302 ELDIRA------------------YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
             DI +                  Y  LI GL   G+   A +LF  + +  +I D  TY
Sbjct: 533 S-DIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTY 591

Query: 344 NIMIHALCADGKMDKARDLFLDM 366
            ++I   C  G +  A  L+ DM
Sbjct: 592 TLLIRGQCMLGYVLNAMMLYADM 614



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 195/365 (53%), Gaps = 9/365 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +LR     P +   N +++GL +      A  LF+EM       G+V  P+ V
Sbjct: 137 EALYVFRRLRTL---PALPACNAVLDGLVKARRPGCAWELFDEML----RRGLV--PSVV 187

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+    +G V KA+E++ +M  + I+PNVVTY ++I   C      +A+ LF  M
Sbjct: 188 TYNTLINACRFQGTVAKAQEVWDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAM 247

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+QPN  ++NV+M+  C+   ++ A  L + +++ G+ PNA ++ TL+DGFC   R 
Sbjct: 248 KEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRF 307

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ +F+ M   G    V  Y+ L++G  ++   + AL+LY EM   G+ PD    + +
Sbjct: 308 SEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIV 367

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  Q+  A +    +Q  GV  +  AY   ID  C+ G + EA+     +  +  
Sbjct: 368 VRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGI 427

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E ++ +Y+ LIDG  K G+++IA  ++  +    +  +VVTY  +IH    +G +D A  
Sbjct: 428 EPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFR 487

Query: 362 LFLDM 366
           L  +M
Sbjct: 488 LHKEM 492



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 174/355 (49%), Gaps = 8/355 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIV-ALNLFEEMANGNGEFGVVCKPNTVTYT 64
           LF ++   G  P+V TYNTLIN  CR   T+  A  ++++M            PN VTYT
Sbjct: 173 LFDEMLRRGLVPSVVTYNTLINA-CRFQGTVAKAQEVWDQMVAQQ------IDPNVVTYT 225

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I  LC+EG +  A+ LF  MK+  + PN  TYN L+ G C  +D N A  L+ E++  
Sbjct: 226 TMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELLKS 285

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN V F  +++  CK  +  EA  +   M + GV P   VYN+LMDG   +G    A
Sbjct: 286 GLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEA 345

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L+  M  +G   + F+ SI++ G C   ++  A      +   G+  +   YN L   
Sbjct: 346 LALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDE 405

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
              I  +E A      M   G+  +  +Y + IDG  K G +  A+ ++  +     E +
Sbjct: 406 YCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPN 465

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +  Y  LI G  K+G +  A+ L + +    +  + +T ++++  LC + ++ +A
Sbjct: 466 VVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEA 520



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 157/312 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P       ++DGL K      A ELF +M    + P+VVTYN+LI+   +     +A+ +
Sbjct: 149 PALPACNAVLDGLVKARRPGCAWELFDEMLRRGLVPSVVTYNTLINACRFQGTVAKAQEV 208

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + +M+ Q + PNVV++  ++  LC+ G + +A RL + M + G++PN + YN LM G C 
Sbjct: 209 WDQMVAQQIDPNVVTYTTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQ 268

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              VN A  L+  +   G   N   ++ LI+G+CK K    A  ++ EM   G+ P V +
Sbjct: 269 RDDVNSAVVLYQELLKSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPV 328

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN+L  G F     + A  L+ EM R G+  D +     + GLC  G +  A    + ++
Sbjct: 329 YNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQ 388

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                L+  AYN LID  C+ G L+ A      +    +  +VV+Y+ +I      GKM 
Sbjct: 389 EDGVNLNAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448

Query: 358 KARDLFLDMEAK 369
            A  ++ +M AK
Sbjct: 449 IAMAIYTEMVAK 460



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 142/314 (45%), Gaps = 52/314 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  +F+++  FG  P V  YN+L++G  R+G+   AL L++EM                
Sbjct: 309 EAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEMTRLGLCPDEFTCSIVV 368

Query: 47  ----------------NGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                            G  E GV    N   Y  +ID  C+ G +++A     +M +  
Sbjct: 369 RGLCDGGQMHVADRFLQGVQEDGV--NLNAAAYNALIDEYCRIGNLEEALATCTRMTEVG 426

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           I PNVV+Y+SLI G         A  ++ EM+ +G++PNVV++  +++   KNG +D A 
Sbjct: 427 IEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAF 486

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK--HNVFS------ 202
           RL + MI+ G+ PNA   + L+DG C   RV  A    +    + C   H+VFS      
Sbjct: 487 RLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEE 546

Query: 203 ---------YSILING-YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                    Y  LI G Y   +  E A  L+S M   G+ PD   Y  L  G   +  V 
Sbjct: 547 ECLIPNSVIYMTLIYGLYLDGQHCE-AGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVL 605

Query: 253 RAFKLFDEMQRHGV 266
            A  L+ +M + GV
Sbjct: 606 NAMMLYADMMKIGV 619



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 120/235 (51%), Gaps = 27/235 (11%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N   YN LI+  CR G      NL E +A       V  +PN V+Y+++IDG  K G + 
Sbjct: 395 NAAAYNALIDEYCRIG------NLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQ 448

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A  ++ +M  + I PNVVTY +LIHG       + A  L  EM++ G+ PN ++ +V++
Sbjct: 449 IAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLV 508

Query: 138 NELCKNGKMDEASRLLELMIQIGVR-------------------PNAFVYNTLMDGFCLT 178
           + LC+  ++ EA R +  M   G++                   PN+ +Y TL+ G  L 
Sbjct: 509 DGLCRENRVQEAVRFV--MEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLD 566

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+   A +LF  M   G   + F+Y++LI G C    +  A+ LY++M+  G+KP
Sbjct: 567 GQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 87/181 (48%), Gaps = 23/181 (12%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A++ ++   G EPNV TY  LI+G  + G    A  L +EM     E G+   PN +T
Sbjct: 450 AMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMI----ENGI--SPNAIT 503

Query: 63  YTTIIDGLCKEGFVDKAKELFLK-----------------MKDENINPNVVTYNSLIHGF 105
            + ++DGLC+E  V +A    ++                 +++E + PN V Y +LI+G 
Sbjct: 504 VSVLVDGLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGL 563

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
                  EA  LF  M   G+ P+  ++ +++   C  G +  A  L   M++IGV+P  
Sbjct: 564 YLDGQHCEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKPTR 623

Query: 166 F 166
           +
Sbjct: 624 Y 624



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 3/98 (3%)

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           A    +  L + G + EA+ +FR LR L     + A N ++DGL K+ R   AWELF  +
Sbjct: 121 ALGVLVIALSQMGLLDEALYVFRRLRTLP---ALPACNAVLDGLVKARRPGCAWELFDEM 177

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            R  L+  VVTYN +I+A    G + KA++++  M A+
Sbjct: 178 LRRGLVPSVVTYNTLINACRFQGTVAKAQEVWDQMVAQ 215


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 200/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++  FG  P+V ++  LI G CR G    AL +++EM +         KP+ V
Sbjct: 244 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG------IKPDLV 297

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +++ +I    + G +D A     +M+   + P+ V Y  +I GFC A   ++A  +  EM
Sbjct: 298 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 357

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++N ++N LCK  ++ +A  LL  M + GV P+   + TL+ G+C+ G++
Sbjct: 358 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 417

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A +LF +M +   + ++ +Y+ LI+G C+  +++ A  L+ +M S+ I P+ V Y+ L
Sbjct: 418 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 477

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E  QVE AF   DEM   G+  +   Y + I G C++G + +  +  + + + K 
Sbjct: 478 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN LI G  K  ++  A++L   + +  +  DVVTYN++I+     G + +A  
Sbjct: 538 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 597

Query: 362 LFLDMEAK 369
           +F  M AK
Sbjct: 598 IFEKMCAK 605



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 193/369 (52%), Gaps = 14/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  ++ ++R  G +P++ +++ LI    R G    A+    EM      FG+V  P+ V
Sbjct: 279 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC----FGLV--PDGV 332

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENIN----PNVVTYNSLIHGFCYANDWNEAKCL 117
            YT +I G C+ G +  A    L+++DE +     P+VVTYN+L++G C      +A+ L
Sbjct: 333 IYTMVIGGFCRAGLMSDA----LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 388

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM ++GV P++ +F  +++  C  GK+D+A +L + M+   +RP+   YNTL+DG C 
Sbjct: 389 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 448

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G +++A +L+  M S     N  +YSILI+ +C+  ++E A     EM++KGI P+++ 
Sbjct: 449 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 508

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN++  G      V +  K   +M  + V+ D   Y T I G  K   + +A +L   + 
Sbjct: 509 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 568

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K + D+  YN LI+G    G ++ A  +F  +    +  D  TY  MI+     G   
Sbjct: 569 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 628

Query: 358 KARDLFLDM 366
           +A  L  +M
Sbjct: 629 EAFQLHDEM 637



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 184/345 (53%), Gaps = 8/345 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK-PNTVTYTTIIDGLCKEG 74
           E N +T N +++  C+      AL  F+++     E    C  P+ VT+  ++D   + G
Sbjct: 153 EVNTYTLNIMVHNYCK------ALE-FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 205

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
             + A  L   M  + + P +VTYNS++ G C +  W++A  +F EM D GV P+V SF 
Sbjct: 206 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 265

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++   C+ G+++EA ++ + M   G++P+   ++ L+  F   G+++ A      M   
Sbjct: 266 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 325

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +   Y+++I G+C+   +  AL +  EM+  G  PDVV YNTL  GL +  ++  A
Sbjct: 326 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 385

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L +EM+  GV  D   + T I G C  G + +A++LF T+   +   DI  YN LIDG
Sbjct: 386 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 445

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +C+ G L  A +L+  +    +  + VTY+I+I + C  G+++ A
Sbjct: 446 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 490



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 170/339 (50%), Gaps = 6/339 (1%)

Query: 31  RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           R G   +A + +  + + N E       NT T   ++   CK    DK   +  +M+   
Sbjct: 133 RAGWPHLAADAYRLVFSSNSEV------NTYTLNIMVHNYCKALEFDKVDAVISEMEKRC 186

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P+VVT+N ++     A D   A  L   M+ +G++P +V++N ++  LC++G  D+A 
Sbjct: 187 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 246

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            + + M   GV P+   +  L+ GFC  G +  A +++  M   G K ++ S+S LI  +
Sbjct: 247 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 306

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  +++ A++   EM   G+ PD VIY  +  G      +  A ++ DEM   G   D 
Sbjct: 307 ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDV 366

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y T ++GLCK   +++A  L   +R      D+  +  LI G C  G+L  A +LF +
Sbjct: 367 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 426

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    L  D+VTYN +I  +C  G +DKA DL+ DM ++
Sbjct: 427 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR 465



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 151/269 (56%), Gaps = 6/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++R  G  P++ T+ TLI+G C  G    AL LF+ M N         +P+ 
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR------LRPDI 436

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+IDG+C++G +DKA +L+  M    I PN VTY+ LI   C      +A     E
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 496

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ PN++++N I+   C++G + +  + L+ M+   V P+   YNTL+ G+    +
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A +L   ME    + +V +Y++LING+  +  ++ A  ++ +M +KGI+PD   Y +
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 616

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +  G       + AF+L DEM + G A D
Sbjct: 617 MINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 133/280 (47%)

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
           +E+   +   +  P    ++ LI  +  +    EA   F  ++D  V     + N ++  
Sbjct: 71  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 130

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L + G    A+    L+       N +  N ++  +C     ++ + +   ME      +
Sbjct: 131 LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 190

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V +++++++   +  + E A++L   M+SKG+KP +V YN++  GL      ++A+++F 
Sbjct: 191 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 250

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           EM   GVA D  ++   I G C+ G I EA+++++ +R    + D+ +++CLI    + G
Sbjct: 251 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 310

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++  A    R +    L+ D V Y ++I   C  G M  A
Sbjct: 311 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 350


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 189/354 (53%), Gaps = 6/354 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G +PNV +YNT+I+G    G+   A  + + M     E      P++ TY ++I G+CK
Sbjct: 278 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE------PDSYTYGSLISGMCK 331

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG +++A  LF KM +  + PN VTYN+LI G+C   D   A     EM+ +G+ P+V +
Sbjct: 332 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 391

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N++++ L   G+M EA  +++ M + G+ P+A  YN L++G+   G   +A +L   M 
Sbjct: 392 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 451

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G +    +Y+ LI    +   ++ A  L+ ++L +G+ PDV+++N +  G      VE
Sbjct: 452 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVE 511

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           RAF L  EM R  V  D   + T + G C+ G + EA  L   ++    + D  +YN LI
Sbjct: 512 RAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLI 571

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G  + G +K A+ +   +        ++TYN +I  LC + + D A +L  +M
Sbjct: 572 SGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 625



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 178/348 (51%), Gaps = 6/348 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +   +RV G EP+ +TY +LI+G+C+ G    A  LF++M     E G+V  PN VT
Sbjct: 303 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLV--PNAVT 356

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C +G +++A     +M  + I P+V TYN L+H         EA  +  EM 
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 416

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ +++N+++N   + G   +A  L   M+  G+ P    Y +L+       R+ 
Sbjct: 417 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 476

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++LF  +   G   +V  ++ +++G+C N  +E A  L  EM  K + PD V +NTL 
Sbjct: 477 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 536

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     +VE A  L DEM+R G+  D  +Y T I G  + G I +A  +   +  + + 
Sbjct: 537 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 596

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
             +  YN LI  LCK+    +A EL + +    +  D  TY  +I  +
Sbjct: 597 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++  G  P + T N +++   +     +A  L+ EM      F +       
Sbjct: 197 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM------FRLRISSTVY 250

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++ LCKEG + KA+E    M+     PNVV+YN++IHG+    +   A+ +   M
Sbjct: 251 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 310

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+  ++  +++ +CK G+++EAS L + M++IG+ PNA  YNTL+DG+C  G +
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA      M   G   +V +Y++L++       +  A  +  EM  KGI PD + YN L
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G       ++AF L +EM   G+      Y + I  L +   + EA +LF  +     
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  +N ++DG C +G ++ A+ L + + R  +  D VT+N ++   C +GK+++AR 
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550

Query: 362 LFLDMEAK 369
           L  +M+ +
Sbjct: 551 LLDEMKRR 558



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 179/355 (50%), Gaps = 9/355 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A   +LR+      V+T+N ++N LC+ G    A      M       G+  KPN V+Y 
Sbjct: 238 AEMFRLRI---SSTVYTFNIMVNVLCKEGKLKKAREFIGFME------GLGFKPNVVSYN 288

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           TII G    G ++ A+ +   M+ + I P+  TY SLI G C      EA  LF +M++ 
Sbjct: 289 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 348

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN V++N +++  C  G ++ A    + M++ G+ P+   YN L+    + GR+  A
Sbjct: 349 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 408

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +++   M   G   +  +Y+ILINGY +    + A  L++EMLSKGI+P  V Y +L   
Sbjct: 409 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 468

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L   ++++ A  LF+++   GV+ D   +   +DG C NG +  A  L + +       D
Sbjct: 469 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 528

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +N L+ G C+ G+++ A  L   + R  +  D ++YN +I      G +  A
Sbjct: 529 EVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA 583



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 155/316 (49%), Gaps = 29/316 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           EA+ LF K+   G  PN  TYNTLI+G C  G    A +  +EM                
Sbjct: 337 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 396

Query: 50  ---------GEFGVVCK--------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                    GE   + K        P+ +TY  +I+G  + G   KA +L  +M  + I 
Sbjct: 397 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 456

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P  VTY SLI+     N   EA  LF +++DQGV P+V+ FN +++  C NG ++ A  L
Sbjct: 457 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 516

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M +  V P+   +NTLM G C  G+V  A  L   M+  G K +  SY+ LI+GY +
Sbjct: 517 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 576

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +I+ A  +  EMLS G  P ++ YN L   L +  + + A +L  EM   G++ D   
Sbjct: 577 RGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 636

Query: 273 YRTFIDGLCKNGYIVE 288
           Y + I+G+     +VE
Sbjct: 637 YLSLIEGMGNVDTLVE 652



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 161/331 (48%), Gaps = 5/331 (1%)

Query: 35  TIVALN--LFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           T +A N  LF+E+        V    +++ +  ++   C+    D+A + F  MK++ I 
Sbjct: 155 TRIATNRELFDELTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 211

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P + T N ++  F   N    A  L+ EM    +   V +FN+++N LCK GK+ +A   
Sbjct: 212 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 271

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M  +G +PN   YNT++ G+   G +  A  +  +M   G + + ++Y  LI+G CK
Sbjct: 272 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 331

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  L+ +M+  G+ P+ V YNTL  G      +ERAF   DEM + G+      
Sbjct: 332 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 391

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   +  L   G + EA ++ + +R      D   YN LI+G  + G  K A++L   + 
Sbjct: 392 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 451

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              +    VTY  +I+ L    +M +A DLF
Sbjct: 452 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 482


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 176/350 (50%), Gaps = 9/350 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ +TY  LI GLC  G    AL+L ++M          C+P+ VTYT +++ +CK    
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE------CQPSVVTYTVLLEAVCKSSGF 188

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A ++  +M+ +   PN+VTYN +I+G C  +  ++A+ +   +   G QP+ VS+  +
Sbjct: 189 GQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTV 248

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC   + ++   L   M++    PN   ++ L+  FC  G V RA E+   M   GC
Sbjct: 249 LKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGC 308

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N    +I+IN  CK   ++ A    + M S G  PD + Y T+  GL    + E A +
Sbjct: 309 TANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKE 368

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L +EM R     +   + TFI  LC+ G I +A+ L   +      + I  YN L++G C
Sbjct: 369 LLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFC 428

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             GR+  A ELF SLP      + +TY  ++  LC   ++D A +L  +M
Sbjct: 429 VQGRVDSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEM 475



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 184/361 (50%), Gaps = 9/361 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF ++    C PN  T++ L+   CR G    A+ + + M+    E G  C  NT     
Sbjct: 264 LFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMS----EHG--CTANTTLCNI 317

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+ +CK+G VD A E    M     +P+ ++Y +++ G C A  W +AK L  EM+ + 
Sbjct: 318 VINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKN 377

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             PN V+FN  +  LC+ G +D+A  L+E M + G       YN L++GFC+ GRV+ A 
Sbjct: 378 CPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSAL 437

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ELF    S+ C+ N  +Y+ L+ G C  + ++ A  L +EM+      +VV +N L    
Sbjct: 438 ELF---NSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFF 494

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   VE A +L  +M  HG   +   + T +DG+ ++    EA+EL   L      LD 
Sbjct: 495 CQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDT 554

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y+ ++D L +  R++ A ++F ++    +    V YN ++ ALC   + D+A D F  
Sbjct: 555 ITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAH 614

Query: 366 M 366
           M
Sbjct: 615 M 615



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 180/358 (50%), Gaps = 9/358 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++   GC  N    N +IN +C+ G    A     E  N  G +G  C P+T++
Sbjct: 296 AIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF----EFLNNMGSYG--CSPDTIS 349

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++ GLC+ G  + AKEL  +M  +N  PN VT+N+ I   C     ++A  L  +M 
Sbjct: 350 YTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMP 409

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G    +V++N ++N  C  G++D A   LEL   +   PN   Y TL+ G C   R++
Sbjct: 410 EYGCSVGIVTYNALVNGFCVQGRVDSA---LELFNSLPCEPNTITYTTLLTGLCHAERLD 466

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M    C  NV ++++L++ +C+   +E A+ L  +M+  G  P+++ +NTL 
Sbjct: 467 AAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLL 526

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+ E    E A +L   +   G++ DT  Y + +D L +   I EAV++F  ++ +   
Sbjct: 527 DGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMR 586

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
                YN ++  LCK      A + F  +     + +  TY I+I  L  +G + +AR
Sbjct: 587 PKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEAR 644



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 186/388 (47%), Gaps = 40/388 (10%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           C+P+V TY  L+  +C++     A+ + +EM A G       C PN VTY  II+G+C+E
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKG-------CTPNIVTYNVIINGMCRE 220

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD A+++  ++      P+ V+Y +++ G C A  W + + LF EM++    PN V+F
Sbjct: 221 DRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTF 280

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++++   C+ G ++ A  +L+ M + G   N  + N +++  C  GRV+ A E   +M S
Sbjct: 281 DMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGS 340

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  SY+ ++ G C+    E A  L +EM+ K   P+ V +NT    L +   +++
Sbjct: 341 YGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQ 400

Query: 254 AFKLFDEMQRHGVA--------------------------------ADTWAYRTFIDGLC 281
           A  L ++M  +G +                                 +T  Y T + GLC
Sbjct: 401 AILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTITYTTLLTGLC 460

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
               +  A EL   +      L++  +N L+   C+ G ++ A EL + +       +++
Sbjct: 461 HAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLI 520

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
           T+N ++  +  D   ++A +L   + +K
Sbjct: 521 TFNTLLDGITEDCNSEEALELLHGLVSK 548



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 153/351 (43%), Gaps = 43/351 (12%)

Query: 44  EMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH 103
           E +   GE      P+    T +I  LC+ G    A  +    +      +V  YN+L+ 
Sbjct: 59  ERSTSRGE-----APDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVA 113

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
           G+C     + A+ L   M    V P+  ++  ++  LC  G++ +A  LL+ M++   +P
Sbjct: 114 GYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQP 170

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           +   Y  L++  C +    +A ++   M + GC  N+ +Y+++ING C+   ++ A  + 
Sbjct: 171 SVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQIL 230

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQ--------------------------------- 250
           + + S G +PD V Y T+  GL    +                                 
Sbjct: 231 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRG 290

Query: 251 --VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             VERA ++ D M  HG  A+T      I+ +CK G + +A E    +       D  +Y
Sbjct: 291 GMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISY 350

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++ GLC++GR + A EL   + R     + VT+N  I  LC  G +D+A
Sbjct: 351 TTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 137/269 (50%), Gaps = 9/269 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++  +GC   + TYN L+NG C  G    AL LF  +          C+PNT+
Sbjct: 400 QAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---------CEPNTI 450

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ GLC    +D A EL  +M   +   NVVT+N L+  FC      EA  L  +M
Sbjct: 451 TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQM 510

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN+++FN +++ + ++   +EA  LL  ++  G+  +   Y++++D      R+
Sbjct: 511 MEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRI 570

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F +++ MG +     Y+ +++  CK  E + A+  ++ M+S    P+   Y  L
Sbjct: 571 EEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVIL 630

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             GL     ++ A  +  E+   GV + +
Sbjct: 631 IEGLAREGLLKEARYVLSELCSRGVLSKS 659



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 122/251 (48%), Gaps = 3/251 (1%)

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           +D  EA  L      +G  P+V     ++  LC+ G+  +A+R+L      G   + F Y
Sbjct: 49  DDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAY 108

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           NTL+ G+C  GR++ A  L  SM       + ++Y+ LI G C    +  ALSL  +ML 
Sbjct: 109 NTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +  +P VV Y  L   + +     +A K+ DEM+  G   +   Y   I+G+C+   + +
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A ++   L    ++ D  +Y  ++ GLC + R +    LF  +     + + VT+++++ 
Sbjct: 226 ARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVR 285

Query: 349 ALCADGKMDKA 359
             C  G +++A
Sbjct: 286 FFCRGGMVERA 296



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 106/230 (46%), Gaps = 3/230 (1%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L     + EA+RL+E     G  P+ ++   L+   C  GR + A  +  + E  G 
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +VF+Y+ L+ GYC+   ++ A  L + M    + PD   Y  L  GL +  +V  A  
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALS 158

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D+M R         Y   ++ +CK+    +A+++   +R      +I  YN +I+G+C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +  R+  A ++   L       D V+Y  ++  LCA  + +    LF +M
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEM 268



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 6/166 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC PN+ T+NTL++G+    ++  AL L   + +           +T+
Sbjct: 502 EAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISL------DTI 555

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++I+D L +E  +++A ++F  ++D  + P  V YN ++   C   + + A   F  M
Sbjct: 556 TYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHM 615

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
           +     PN  ++ +++  L + G + EA  +L  +   GV   + +
Sbjct: 616 VSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVLSKSLI 661


>gi|357437447|ref|XP_003588999.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478047|gb|AES59250.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 458

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/271 (38%), Positives = 161/271 (59%), Gaps = 11/271 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTG-HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G + + ++Y TLINGLC+ G  T  AL L  +            +P+ V YTT+ID +CK
Sbjct: 135 GFDVDHYSYGTLINGLCKVGGDTRAALQLLRQ----------AFEPDVVMYTTVIDNMCK 184

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           + FV+ A +L+ +M    I+PNVVTY +LI GFC      EA  LF +M+ + + PNV +
Sbjct: 185 DTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISENINPNVYT 244

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN +++  CK GK++EA  +L  M++  ++ +   Y++LM+G+CL   V +A+ +F +M 
Sbjct: 245 FNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTMA 304

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                ++V SY+I+IN +CK K ++ A+ L+ EM  K I PDVV Y+TL  GL +  ++ 
Sbjct: 305 ERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRLS 364

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            A +L DEM   G   +   Y   +D LCKN
Sbjct: 365 YAMELVDEMDDRGEPPNIITYCPIVDVLCKN 395



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 162/302 (53%), Gaps = 6/302 (1%)

Query: 64  TTIIDGLCKEGFVDKAKELFLKMK-DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           TT I G+C+ G + +A     K+      + +  +Y +LI+G C       A    ++++
Sbjct: 108 TTPIKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAA---LQLL 164

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            Q  +P+VV +  +++ +CK+  +++A  L   M+  G+ PN   Y  L+DGFC+ G++ 
Sbjct: 165 RQAFEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLE 224

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  M S     NV++++ L++ +CK  +IE A ++ + M+ K +K DVV Y++L 
Sbjct: 225 EALGLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLM 284

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   +++V +A  +F  M    ++ D  +Y   I+  CK   + EA++LF  + + +  
Sbjct: 285 NGYCLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIF 344

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA--DGKMDKAR 360
            D+  Y+ LIDGLCKSGRL  A EL   +       +++TY  ++  LC   DG +   +
Sbjct: 345 PDVVTYHTLIDGLCKSGRLSYAMELVDEMDDRGEPPNIITYCPIVDVLCKNHDGVLSSGK 404

Query: 361 DL 362
            L
Sbjct: 405 SL 406



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 78/231 (33%), Positives = 132/231 (57%), Gaps = 8/231 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++   G  PNV TY  LI+G C  G    AL LF++M + N        PN  
Sbjct: 190 DAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEALGLFKKMISEN------INPNVY 243

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D  CKEG +++AK +   M ++++  +VV Y+SL++G+C  N+  +A+ +F  M
Sbjct: 244 TFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGYCLVNEVFKAQSIFKTM 303

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ +  +V S+N+++NE CK   +DEA +L E M    + P+   Y+TL+DG C +GR+
Sbjct: 304 AERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDVVTYHTLIDGLCKSGRL 363

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
           + A EL   M+  G   N+ +Y  +++  CKN   +G LS    + S G+ 
Sbjct: 364 SYAMELVDEMDDRGEPPNIITYCPIVDVLCKNH--DGVLSSGKSLPSCGLS 412



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 141/269 (52%), Gaps = 4/269 (1%)

Query: 102 IHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           I G C   D   A     +++  +G   +  S+  ++N LCK G    A+  L+L+ Q  
Sbjct: 111 IKGICQTGDIQRALNFHYKVVVARGFDVDHYSYGTLINGLCKVGGDTRAA--LQLLRQ-A 167

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             P+  +Y T++D  C    VN A +L+  M + G   NV +Y+ LI+G+C   ++E AL
Sbjct: 168 FEPDVVMYTTVIDNMCKDTFVNDAFDLYYEMVASGISPNVVTYTALIDGFCVVGKLEEAL 227

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L+ +M+S+ I P+V  +N L     +  ++E A  + + M    + +D  AY + ++G 
Sbjct: 228 GLFKKMISENINPNVYTFNGLVDAFCKEGKIEEAKNVLNTMMEKDLKSDVVAYSSLMNGY 287

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           C    + +A  +F+T+   +   D+R+YN +I+  CK   +  A +LF  +P   +  DV
Sbjct: 288 CLVNEVFKAQSIFKTMAERELSYDVRSYNIMINEFCKMKMVDEAIKLFEEMPLKQIFPDV 347

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VTY+ +I  LC  G++  A +L  +M+ +
Sbjct: 348 VTYHTLIDGLCKSGRLSYAMELVDEMDDR 376


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/354 (31%), Positives = 189/354 (53%), Gaps = 6/354 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G +PNV +YNT+I+G    G+   A  + + M     E      P++ TY ++I G+CK
Sbjct: 256 LGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIE------PDSYTYGSLISGMCK 309

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG +++A  LF KM +  + PN VTYN+LI G+C   D   A     EM+ +G+ P+V +
Sbjct: 310 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 369

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N++++ L   G+M EA  +++ M + G+ P+A  YN L++G+   G   +A +L   M 
Sbjct: 370 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 429

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S G +    +Y+ LI    +   ++ A  L+ ++L +G+ PDV+++N +  G      VE
Sbjct: 430 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVE 489

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           RAF L  EM R  V  D   + T + G C+ G + EA  L   ++    + D  +YN LI
Sbjct: 490 RAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLI 549

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G  + G +K A+ +   +        ++TYN +I  LC + + D A +L  +M
Sbjct: 550 SGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEM 603



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 178/348 (51%), Gaps = 6/348 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +   +RV G EP+ +TY +LI+G+C+ G    A  LF++M     E G+V  PN VT
Sbjct: 281 ARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV----EIGLV--PNAVT 334

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG C +G +++A     +M  + I P+V TYN L+H         EA  +  EM 
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 394

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ P+ +++N+++N   + G   +A  L   M+  G+ P    Y +L+       R+ 
Sbjct: 395 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 454

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A++LF  +   G   +V  ++ +++G+C N  +E A  L  EM  K + PD V +NTL 
Sbjct: 455 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 514

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G     +VE A  L DEM+R G+  D  +Y T I G  + G I +A  +   +  + + 
Sbjct: 515 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 574

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
             +  YN LI  LCK+    +A EL + +    +  D  TY  +I  +
Sbjct: 575 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 191/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++  G  P + T N +++   +     +A  L+ EM      F +       
Sbjct: 175 EAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEM------FRLRISSTVY 228

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++ LCKEG + KA+E    M+     PNVV+YN++IHG+    +   A+ +   M
Sbjct: 229 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 288

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+  ++  +++ +CK G+++EAS L + M++IG+ PNA  YNTL+DG+C  G +
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA      M   G   +V +Y++L++       +  A  +  EM  KGI PD + YN L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G       ++AF L +EM   G+      Y + I  L +   + EA +LF  +     
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  +N ++DG C +G ++ A+ L + + R  +  D VT+N ++   C +GK+++AR 
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528

Query: 362 LFLDMEAK 369
           L  +M+ +
Sbjct: 529 LLDEMKRR 536



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 179/355 (50%), Gaps = 9/355 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A   +LR+      V+T+N ++N LC+ G    A      M       G+  KPN V+Y 
Sbjct: 216 AEMFRLRI---SSTVYTFNIMVNVLCKEGKLKKAREFIGFME------GLGFKPNVVSYN 266

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           TII G    G ++ A+ +   M+ + I P+  TY SLI G C      EA  LF +M++ 
Sbjct: 267 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 326

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN V++N +++  C  G ++ A    + M++ G+ P+   YN L+    + GR+  A
Sbjct: 327 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEA 386

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           +++   M   G   +  +Y+ILINGY +    + A  L++EMLSKGI+P  V Y +L   
Sbjct: 387 DDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYV 446

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L   ++++ A  LF+++   GV+ D   +   +DG C NG +  A  L + +       D
Sbjct: 447 LSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPD 506

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +N L+ G C+ G+++ A  L   + R  +  D ++YN +I      G +  A
Sbjct: 507 EVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDA 561



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 155/316 (49%), Gaps = 29/316 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           EA+ LF K+   G  PN  TYNTLI+G C  G    A +  +EM                
Sbjct: 315 EASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLV 374

Query: 50  ---------GEFGVVCK--------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                    GE   + K        P+ +TY  +I+G  + G   KA +L  +M  + I 
Sbjct: 375 HALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIE 434

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P  VTY SLI+     N   EA  LF +++DQGV P+V+ FN +++  C NG ++ A  L
Sbjct: 435 PTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFML 494

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ M +  V P+   +NTLM G C  G+V  A  L   M+  G K +  SY+ LI+GY +
Sbjct: 495 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGR 554

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +I+ A  +  EMLS G  P ++ YN L   L +  + + A +L  EM   G++ D   
Sbjct: 555 RGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDST 614

Query: 273 YRTFIDGLCKNGYIVE 288
           Y + I+G+     +VE
Sbjct: 615 YLSLIEGMGNVDTLVE 630



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 161/331 (48%), Gaps = 5/331 (1%)

Query: 35  TIVALN--LFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           T +A N  LF+E+        V    +++ +  ++   C+    D+A + F  MK++ I 
Sbjct: 133 TRIATNRELFDELTLSRDRLSV---KSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIV 189

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P + T N ++  F   N    A  L+ EM    +   V +FN+++N LCK GK+ +A   
Sbjct: 190 PKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREF 249

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +  M  +G +PN   YNT++ G+   G +  A  +  +M   G + + ++Y  LI+G CK
Sbjct: 250 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 309

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              +E A  L+ +M+  G+ P+ V YNTL  G      +ERAF   DEM + G+      
Sbjct: 310 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 369

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   +  L   G + EA ++ + +R      D   YN LI+G  + G  K A++L   + 
Sbjct: 370 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEML 429

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLF 363
              +    VTY  +I+ L    +M +A DLF
Sbjct: 430 SKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 460


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 188/352 (53%), Gaps = 7/352 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ + N+L+N L + G T  A  ++++M       G+V  P+    + +++  CK+G V
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMI----RVGIV--PDVFMVSIMVNAFCKDGKV 242

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A     KM++  + PN+VTY+SLI+G+    D   AK +   M ++GV  NVV++ ++
Sbjct: 243 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302

Query: 137 MNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +   CK  KMDEA ++L  M +   + P+   Y  L+DG+C TG+++ A  L   M  +G
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K N+F  + LINGYCK  EI  A  + + M+   +KPD   YNTL  G         AF
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L D+M + G+      Y T + GLC+ G   +A++++  +       D   Y+ L+DGL
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGL 482

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            K    + A  L++ +         +T+N MI  LC  GKM +A ++F  M+
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534



 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 30/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EAA    K+   G EPN+ TY++LING    G    A  + + M+       VV      
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303

Query: 56  ------CK------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                 CK                  P+   Y  +IDG C+ G +D A  L  +M    +
Sbjct: 304 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 363

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
             N+   NSLI+G+C   + +EA+ +   M+D  ++P+  S+N +++  C+ G   EA  
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 423

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L + M+Q G+ P    YNTL+ G C  G  + A +++  M   G   +   YS L++G  
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLF 483

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K +  EGA +L+ ++L++G     + +NT+  GL ++ ++  A ++FD+M+  G + D  
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            YRT IDG CK   + +A ++   +        I  YN LI GL KS RL    +L   +
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEM 603

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               L  ++VTY  +I   C +G +DKA   + +M
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 189/396 (47%), Gaps = 38/396 (9%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+ L+  +   G   +  T+NT+I+GLC+ G  + A  +F++M +      + C P+ +T
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD------LGCSPDGIT 544

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG CK   V +A ++   M+ E I+P++  YNSLI G   +    E   L  EM 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMG 604

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN+V++  +++  CK G +D+A      M + G+  N  + +T++ G    GR++
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 183 RAEELFVSMESMG----------------------------CK----HNVFSYSILINGY 210
            A  L   M   G                            CK     N   Y+I I G 
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ A   +S +  KG  PD   Y TL  G      V+ AF+L DEM R G+  + 
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I+GLCK+  +  A  LF  L       ++  YN LIDG CK G +  A++L   
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +   VVTY+ +I+ LC  G ++++  L   M
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 191/400 (47%), Gaps = 38/400 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G EP V TYNTL+ GLCR G    AL ++  M     + GV   P+ V
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM----KXGVA--PDEV 473

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+T++DGL K    + A  L+  +       + +T+N++I G C      EA+ +F +M
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G  P+ +++  +++  CK   + +A ++   M +  + P+  +YN+L+ G   + R+
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRL 593

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +L   M   G   N+ +Y  LI+G+CK   ++ A S Y EM   G+  +++I +T+
Sbjct: 594 VEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY---------------------RTF---- 276
             GL+ + +++ A  L  +M  HG   D   +                     +TF    
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 713

Query: 277 -------IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
                  I GLCK G + +A   F  L +  +  D   Y  LI G   +G +  A+ L  
Sbjct: 714 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 773

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + R  L+ ++VTYN +I+ LC    +D+A+ LF  +  K
Sbjct: 774 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/375 (28%), Positives = 175/375 (46%), Gaps = 61/375 (16%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN-------------------- 40
           +EA  +F K++  GC P+  TY TLI+G C+  +   A                      
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSL 583

Query: 41  ---LFE-----EMANGNGEFGVV-CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
              LF+     E  +   E G+    PN VTY  +IDG CKEG +DKA   + +M +  +
Sbjct: 584 ISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-------------------------- 125
           + N++  ++++ G       +EA  L  +M+D G                          
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 126 ------VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
                 + PN + +N+ +  LCK GK+D+A R   ++   G  P+ F Y TL+ G+   G
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V+ A  L   M   G   N+ +Y+ LING CK++ ++ A  L+ ++  KG+ P+VV YN
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  G  +I  ++ AFKL D+M   G++     Y   I+GLCK+G I  +++L   +   
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 300 KYELDIRAYNCLIDG 314
             +  +  Y  L+ G
Sbjct: 884 GVDSKLIEYCTLVQG 898



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 113/190 (59%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN + Y   I GLCK G VD A+  F  +  +   P+  TY +LIHG+  A + +EA  L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM+ +G+ PN+V++N ++N LCK+  +D A RL   + Q G+ PN   YNTL+DG+C 
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G ++ A +L   M   G   +V +YS LING CK+ +IE ++ L ++M+  G+   ++ 
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 238 YNTLFIGLFE 247
           Y TL  G F+
Sbjct: 892 YCTLVQGGFK 901



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 178/360 (49%), Gaps = 9/360 (2%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R F   P VF  + ++      G T  AL +F+ M    G+ G +  P+  +  ++++ L
Sbjct: 150 REFAFSPTVF--DMILKVYVEKGLTKNALYVFDNM----GKCGRI--PSLRSCNSLLNNL 201

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            K G    A  ++ +M    I P+V   + +++ FC     +EA     +M + GV+PN+
Sbjct: 202 VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNI 261

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V+++ ++N     G ++ A  +L+ M + GV  N   Y  L+ G+C   +++ AE++   
Sbjct: 262 VTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRG 321

Query: 191 M-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           M E      +  +Y +LI+GYC+  +I+ A+ L  EML  G+K ++ I N+L  G  +  
Sbjct: 322 MQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRG 381

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           ++  A  +   M    +  D+++Y T +DG C+ G+  EA  L   +     E  +  YN
Sbjct: 382 EIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYN 441

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L+ GLC+ G    A +++  + +  +  D V Y+ ++  L      + A  L+ D+ A+
Sbjct: 442 TLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILAR 501



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/195 (36%), Positives = 111/195 (56%), Gaps = 6/195 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  L + G  P+ FTY TLI+G    G+   A  L +EM       G+V  PN V
Sbjct: 732 DARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRR----GLV--PNIV 785

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLCK   VD+A+ LF K+  + + PNVVTYN+LI G+C   + + A  L  +M
Sbjct: 786 TYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKM 845

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P+VV+++ ++N LCK+G ++ + +LL  MI+ GV      Y TL+ G   T   
Sbjct: 846 IEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNY 905

Query: 182 NRAEELFVSMESMGC 196
           N   +     ++M C
Sbjct: 906 NEMSKPEALKQNMNC 920



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 55/331 (16%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD----------------------- 123
           K +N  PNV +Y  L+H       ++E +    +++D                       
Sbjct: 94  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFA 153

Query: 124 ---------------QGVQPNVV----------------SFNVIMNELCKNGKMDEASRL 152
                          +G+  N +                S N ++N L KNG+   A  +
Sbjct: 154 FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 213

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI++G+ P+ F+ + +++ FC  G+V+ A      ME++G + N+ +Y  LINGY  
Sbjct: 214 YQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS 273

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH-GVAADTW 271
             ++E A  +   M  KG+  +VV Y  L  G  +  +++ A K+   MQ    +  D  
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           AY   IDG C+ G I +AV L   +  L  + ++   N LI+G CK G +  A  +   +
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDL 362
               L  D  +YN ++   C +G   +A +L
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNL 424


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 177/355 (49%), Gaps = 11/355 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ FTYN LI  LC  G  + AL +F++M +        C P+ VTY+ ++D  CKE   
Sbjct: 158 PDTFTYNPLIRALCVRGCVLDALAVFDDMLHRG------CSPSVVTYSILLDATCKESGY 211

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A  L  +M+ +   P++VTYN LI+  C   D  EA  +   +   G +P+ V++  +
Sbjct: 212 KQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPV 271

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC + + +EA +LL  M      P+   +N ++   C  G V RA ++   M   GC
Sbjct: 272 LKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGC 331

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLY----SEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             ++ +YS +++G CK + ++ A+ L     +EM+SK   PD V +NT+   L +    +
Sbjct: 332 TPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFD 391

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDG-LCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           RA K+ DEM  HG   D   Y   +DG LCK+    EA++L   +       D   Y  L
Sbjct: 392 RAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSL 451

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             GL +   ++ A  +FR +    L  D + YN ++  LC   + D A D F  M
Sbjct: 452 AFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYM 506



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 166/355 (46%), Gaps = 17/355 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P V   N LI  LC  G    A  + E +               +TY T+++G C+ 
Sbjct: 91  GKDPAVIPCNILIKKLCADGRVADAERVVEALGPSA---------TIITYNTMVNGYCRA 141

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A+ +   +      P+  TYN LI   C      +A  +F +M+ +G  P+VV++
Sbjct: 142 GNIDAARRMIDSVP---FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTY 198

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  CK     +A  LL+ M   G  P+   YN L++  C  G V  A ++  S+ S
Sbjct: 199 SILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPS 258

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GCK +  +Y+ ++   C ++  E A  L ++M S    PD V +N +   L +   V R
Sbjct: 259 YGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGR 318

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE----LDIRAYN 309
           A K+  +M  HG   D   Y + +DGLCK   + EA++L + L           D   +N
Sbjct: 319 ATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFN 378

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA-LCADGKMDKARDLF 363
            +I  LC+ G    A ++   +     I D+ TYN ++   LC   K ++A DL 
Sbjct: 379 TIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLL 433



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 159/329 (48%), Gaps = 34/329 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  L  ++R  GCEP++ TYN LIN +C  G    AL +   + +   +   V      
Sbjct: 213 QAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVL 272

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C P+ VT+  +I  LC++GFV +A ++  +M +    
Sbjct: 273 KSLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCT 332

Query: 93  PNVVTYNSLIHGFCYANDWNEA----KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           P+++TY+S++ G C     +EA    K L  EM+ +   P+ V+FN I+  LC+ G  D 
Sbjct: 333 PDIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDR 392

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGF-CLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           A ++++ M + G  P+   YN ++DGF C + +   A +L   M S G   +  +Y  L 
Sbjct: 393 AIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLA 452

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G  +  E+E A+ ++  + + G+ PD ++YN + +GL +  + + A   F  M  +G  
Sbjct: 453 FGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCM 512

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            D   Y   ++G+   G++ EA EL   L
Sbjct: 513 PDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 143/301 (47%), Gaps = 6/301 (1%)

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GL + G +D A  L   +     +P V+  N LI   C      +A+   +E +  G   
Sbjct: 70  GLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAE-RVVEAL--GPSA 126

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
            ++++N ++N  C+ G +D A R+++    +   P+ F YN L+   C+ G V  A  +F
Sbjct: 127 TIITYNTMVNGYCRAGNIDAARRMID---SVPFAPDTFTYNPLIRALCVRGCVLDALAVF 183

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   GC  +V +YSIL++  CK    + A+ L  EM SKG +PD+V YN L   +   
Sbjct: 184 DDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQ 243

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
             V  A K+ + +  +G   D   Y   +  LC +    EA +L   +       D   +
Sbjct: 244 GDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTF 303

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N +I  LC+ G +  A ++   +       D++TY+ ++  LC + ++D+A  L  ++ A
Sbjct: 304 NAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKELLA 363

Query: 369 K 369
           +
Sbjct: 364 E 364



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 129/269 (47%), Gaps = 6/269 (2%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           N  + G     + + A  L   +   G  P V+  N+++ +LC +G++ +A R++E    
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVE---A 121

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
           +G       YNT+++G+C  G ++ A  +   ++S+    + F+Y+ LI   C    +  
Sbjct: 122 LGPSATIITYNTMVNGYCRAGNIDAARRM---IDSVPFAPDTFTYNPLIRALCVRGCVLD 178

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL+++ +ML +G  P VV Y+ L     +    ++A  L DEM+  G   D   Y   I+
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            +C  G + EA+++  +L     + D   Y  ++  LC S R + A +L   +       
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDME 367
           D VT+N +I +LC  G + +A  +   M 
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMS 327


>gi|356529509|ref|XP_003533333.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12300, mitochondrial-like [Glycine max]
          Length = 450

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 191/366 (52%), Gaps = 8/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F  +      P V  +N +++      H   A++L   +     E   + +P+  
Sbjct: 53  DAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRL-----ELKGI-QPDFF 106

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +++  C  G ++    +  K+      P+ +T+ +LI G C     N+A     ++
Sbjct: 107 TLNILMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKL 166

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG++ + VS+  ++N +CK G    A +L+  +     +PN  +YNT++D  C    V
Sbjct: 167 LAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLV 226

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M + G   NV SY+I+I G+CK+K ++ AL+L+ EM  K + P +V Y +L
Sbjct: 227 SEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSL 286

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++   ++L DEM   G+ AD   Y + IDGLCKNG++  A+ LF  ++  ++
Sbjct: 287 MDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDXRF 346

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +  L+DGLCK GRLK A E+F+ L       DV  YN+MI+  C  G +++A  
Sbjct: 347 --DRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALT 404

Query: 362 LFLDME 367
           +   ME
Sbjct: 405 MRSKME 410



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/367 (32%), Positives = 189/367 (51%), Gaps = 8/367 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  +L + G +P+ FT N L+N  C  G      ++  ++     +      P+T+T
Sbjct: 89  AVSLSHRLELKGIQPDFFTLNILMNCFCHMGQINFGFSVLAKILKRGYQ------PHTIT 142

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT+I GLC +G V+KA     K+  + I  + V+Y +LI+G C   D   A  L  ++ 
Sbjct: 143 FTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKID 202

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +  +PNV  +N I++ LCK   + EA  L   M   G+  N   YN ++ GFC +  V+
Sbjct: 203 GRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISANVVSYNIMIKGFCKSKMVD 262

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  M        + +Y  L++G CK+  I     L  EM  +GI  DV+ YN+L 
Sbjct: 263 EALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYNSLI 322

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +   ++RA  LF++M+      D   +   +DGLCK G + +A E+F+ L   +Y+
Sbjct: 323 DGLCKNGHLDRAIALFNKMK--DXRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTKEYD 380

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LD+  YN +I+G CK G L+ A  +   +     I   VT+ I+I+AL    + DKA  L
Sbjct: 381 LDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKAEKL 440

Query: 363 FLDMEAK 369
             +M A+
Sbjct: 441 LHEMIAR 447



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 155/292 (53%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           VD A   F  M      P V+ +N ++  F     ++ A  L   +  +G+QP+  + N+
Sbjct: 51  VDDAVSQFNSMLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNI 110

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +MN  C  G+++    +L  +++ G +P+   + TL+ G CL G+VN+A      + + G
Sbjct: 111 LMNCFCHMGQINFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG 170

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K +  SY  LING CK  +  GA+ L  ++  +  KP+V +YNT+   L +   V  A+
Sbjct: 171 IKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAY 230

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF EM   G++A+  +Y   I G CK+  + EA+ LF+ +        I  Y  L+DGL
Sbjct: 231 GLFSEMTAKGISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQKNMVPTIVTYGSLMDGL 290

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           CKSGR+   WEL   +    + ADV+TYN +I  LC +G +D+A  LF  M+
Sbjct: 291 CKSGRISYVWELIDEMHDRGIPADVITYNSLIDGLCKNGHLDRAIALFNKMK 342



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 136/252 (53%), Gaps = 10/252 (3%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           +PNV  YNT+I+ LC+      A  LF EM A G          N V+Y  +I G CK  
Sbjct: 207 KPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG-------ISANVVSYNIMIKGFCKSK 259

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD+A  LF +M  +N+ P +VTY SL+ G C +   +    L  EM D+G+  +V+++N
Sbjct: 260 MVDEALNLFKEMHQKNMVPTIVTYGSLMDGLCKSGRISYVWELIDEMHDRGIPADVITYN 319

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++ LCKNG +D A  L   M     R +   +  L+DG C  GR+  A+E+F  + + 
Sbjct: 320 SLIDGLCKNGHLDRAIALFNKMKD--XRFDRLTFTILLDGLCKGGRLKDAQEVFQDLLTK 377

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
               +V+ Y+++INGYCK   +E AL++ S+M   G  P  V +  +   LFE  + ++A
Sbjct: 378 EYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTFEIIINALFEKDENDKA 437

Query: 255 FKLFDEMQRHGV 266
            KL  EM   G+
Sbjct: 438 EKLLHEMIARGL 449



 Score =  115 bits (289), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 130/274 (47%), Gaps = 3/274 (1%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           + ++  +H      +  E + L      Q +  N++   V    +     +D+A      
Sbjct: 4   LPFHKFLHWLHAEAEIGENRALISPQQTQSILSNLILTKVKPPSI---QNVDDAVSQFNS 60

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+ +   P    +N ++D F      + A  L   +E  G + + F+ +IL+N +C   +
Sbjct: 61  MLCMRHTPPVIQFNKILDSFAXMKHYSTAVSLSHRLELKGIQPDFFTLNILMNCFCHMGQ 120

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I    S+ +++L +G +P  + + TL  GL    QV +A    D++   G+  D  +Y T
Sbjct: 121 INFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGT 180

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+G+CK G    A++L R +     + ++  YN +ID LCK   +  A+ LF  +    
Sbjct: 181 LINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKG 240

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + A+VV+YNIMI   C    +D+A +LF +M  K
Sbjct: 241 ISANVVSYNIMIKGFCKSKMVDEALNLFKEMHQK 274



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 85/148 (57%), Gaps = 8/148 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +V TYN+LI+GLC+ GH   A+ LF +M +         + + +T+T ++DGLCK 
Sbjct: 310 GIPADVITYNSLIDGLCKNGHLDRAIALFNKMKDX--------RFDRLTFTILLDGLCKG 361

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A+E+F  +  +  + +V  YN +I+G+C      EA  +  +M D G  P+ V+F
Sbjct: 362 GRLKDAQEVFQDLLTKEYDLDVYPYNVMINGYCKQGLLEEALTMRSKMEDNGCIPSAVTF 421

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGV 161
            +I+N L +  + D+A +LL  MI  G+
Sbjct: 422 EIIINALFEKDENDKAEKLLHEMIARGL 449


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/352 (32%), Positives = 188/352 (53%), Gaps = 7/352 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ + N+L+N L + G T  A  ++++M       G+V  P+    + +++  CK+G V
Sbjct: 189 PSLRSCNSLLNNLVKNGETHTAHYVYQQMI----RVGIV--PDVFMVSIMVNAFCKDGKV 242

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A     KM++  + PN+VTY+SLI+G+    D   AK +   M ++GV  NVV++ ++
Sbjct: 243 DEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302

Query: 137 MNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +   CK  KMDEA ++L  M +   + P+   Y  L+DG+C TG+++ A  L   M  +G
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLG 362

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K N+F  + LINGYCK  EI  A  + + M+   +KPD   YNTL  G         AF
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAF 422

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L D+M + G+      Y T + GLC+ G   +A++++  +       D   Y+ L+DGL
Sbjct: 423 NLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGL 482

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            K    + A  L++ +         +T+N MI  LC  GKM +A ++F  M+
Sbjct: 483 FKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMK 534



 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 191/395 (48%), Gaps = 30/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           EAA    K+   G EPN+ TY++LING    G    A  + + M+       VV      
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303

Query: 56  ------CK------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                 CK                  P+   Y  +IDG C+ G +D A  L  +M    +
Sbjct: 304 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGL 363

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
             N+   NSLI+G+C   + +EA+ +   M+D  ++P+  S+N +++  C+ G   EA  
Sbjct: 364 KTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFN 423

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L + M+Q G+ P    YNTL+ G C  G  + A +++  M   G   +   YS L++G  
Sbjct: 424 LCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLF 483

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K +  EGA +L+ ++L++G     + +NT+  GL ++ ++  A ++FD+M+  G + D  
Sbjct: 484 KMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGI 543

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            YRT IDG CK   + +A ++   +        I  YN LI GL KS RL    +L   +
Sbjct: 544 TYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEM 603

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               L  ++VTY  +I   C +G +DKA   + +M
Sbjct: 604 GIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 189/396 (47%), Gaps = 38/396 (9%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+ L+  +   G   +  T+NT+I+GLC+ G  + A  +F++M +      + C P+ +T
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKD------LGCSPDGIT 544

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG CK   V +A ++   M+ E I+P++  YNSLI G   +    E   L  EM 
Sbjct: 545 YRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMG 604

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN+V++  +++  CK G +D+A      M + G+  N  + +T++ G    GR++
Sbjct: 605 IRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRID 664

Query: 183 RAEELFVSMESMG----------------------------CK----HNVFSYSILINGY 210
            A  L   M   G                            CK     N   Y+I I G 
Sbjct: 665 EANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGL 724

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +++ A   +S +  KG  PD   Y TL  G      V+ AF+L DEM R G+  + 
Sbjct: 725 CKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNI 784

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I+GLCK+  +  A  LF  L       ++  YN LIDG CK G +  A++L   
Sbjct: 785 VTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +    +   VVTY+ +I+ LC  G ++++  L   M
Sbjct: 845 MIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQM 880



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 184/389 (47%), Gaps = 61/389 (15%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN-------------------- 40
           +EA  +F K++  GC P+  TY TLI+G C+  +   A                      
Sbjct: 524 VEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSL 583

Query: 41  ---LFE-----EMANGNGEFGVV-CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
              LF+     E+ +   E G+    PN VTY  +IDG CKEG +DKA   + +M +  +
Sbjct: 584 ISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGL 643

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-------------------------- 125
           + N++  ++++ G       +EA  L  +M+D G                          
Sbjct: 644 SANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLD 703

Query: 126 ------VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
                 + PN + +N+ +  LCK GK+D+A R   ++   G  P+ F Y TL+ G+   G
Sbjct: 704 ESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAG 763

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V+ A  L   M   G   N+ +Y+ LING CK++ ++ A  L+ ++  KG+ P+VV YN
Sbjct: 764 NVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYN 823

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  G  +I  ++ AFKL D+M   G++     Y   I+GLCK+G I  +++L   +   
Sbjct: 824 TLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELF 328
             +  +  Y  L+ G  +SG ++   +L+
Sbjct: 884 GVDSKLIEYCTLVQGYIRSGEMQKIHKLY 912



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 191/400 (47%), Gaps = 38/400 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G EP V TYNTL+ GLCR G    AL ++  M     + GV   P+ V
Sbjct: 420 EAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMM----KRGVA--PDEV 473

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+T++DGL K    + A  L+  +       + +T+N++I G C      EA+ +F +M
Sbjct: 474 GYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKM 533

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G  P+ +++  +++  CK   + +A ++   M +  + P+  +YN+L+ G   + R+
Sbjct: 534 KDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRL 593

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +L   M   G   N+ +Y  LI+G+CK   ++ A S Y EM   G+  +++I +T+
Sbjct: 594 VEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTM 653

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY---------------------RTF---- 276
             GL+ + +++ A  L  +M  HG   D   +                     +TF    
Sbjct: 654 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPN 713

Query: 277 -------IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
                  I GLCK G + +A   F  L +  +  D   Y  LI G   +G +  A+ L  
Sbjct: 714 NIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRD 773

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + R  L+ ++VTYN +I+ LC    +D+A+ LF  +  K
Sbjct: 774 EMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQK 813



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 120/205 (58%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN + Y   I GLCK G VD A+  F  +  +   P+  TY +LIHG+  A + +EA  L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM+ +G+ PN+V++N ++N LCK+  +D A RL   + Q G+ PN   YNTL+DG+C 
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G ++ A +L   M   G   +V +YS LING CK+ +IE ++ L ++M+  G+   ++ 
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y TL  G     ++++  KL+D M 
Sbjct: 892 YCTLVQGYIRSGEMQKIHKLYDMMH 916



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 154/306 (50%), Gaps = 1/306 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +   +  I+    ++G    A  +F  M      P++ + NSL++      + + A  ++
Sbjct: 155 SPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVY 214

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M+  G+ P+V   ++++N  CK+GK+DEA+  ++ M  +GV PN   Y++L++G+   
Sbjct: 215 QQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSL 274

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVI 237
           G V  A+ +   M   G   NV +Y++LI GYCK  +++ A  +   M  +  + PD   
Sbjct: 275 GDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERA 334

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G     +++ A +L DEM R G+  + +   + I+G CK G I EA  +   + 
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + D  +YN L+DG C+ G    A+ L   + +  +   V+TYN ++  LC  G  D
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454

Query: 358 KARDLF 363
            A  ++
Sbjct: 455 DALQIW 460



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 143/331 (43%), Gaps = 55/331 (16%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD----------------------- 123
           K +N  PNV +Y  L+H       ++E +    +++D                       
Sbjct: 94  KQQNFRPNVKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFA 153

Query: 124 ---------------QGVQPNVV----------------SFNVIMNELCKNGKMDEASRL 152
                          +G+  N +                S N ++N L KNG+   A  +
Sbjct: 154 FSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYV 213

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            + MI++G+ P+ F+ + +++ FC  G+V+ A      ME++G + N+ +Y  LINGY  
Sbjct: 214 YQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVS 273

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH-GVAADTW 271
             ++E A  +   M  KG+  +VV Y  L  G  +  +++ A K+   MQ    +  D  
Sbjct: 274 LGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDER 333

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           AY   IDG C+ G I +AV L   +  L  + ++   N LI+G CK G +  A  +   +
Sbjct: 334 AYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRM 393

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDL 362
               L  D  +YN ++   C +G   +A +L
Sbjct: 394 VDWNLKPDSYSYNTLLDGYCREGHTSEAFNL 424


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/347 (32%), Positives = 175/347 (50%), Gaps = 7/347 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F K++ F   P   + N L++   + G T      F++M       G   KP   
Sbjct: 43  EAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDM------IGAGAKPTVF 96

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID +CKEG V+ A+ LF +MK   + P+ VTYNS+I GF      ++  C F EM
Sbjct: 97  TYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 156

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D   +P+V+++N ++N  CK GK+ +       M + G++PN   Y+TL+D FC  G +
Sbjct: 157 KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMM 216

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A + +V M  +G   N ++Y+ LI+ YCK   +  A  L +EML  G++ +VV Y  L
Sbjct: 217 QQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTAL 276

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILK 300
             GL           L DEM    +      +   IDGLCKN  + +A++ F R      
Sbjct: 277 IDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFG 336

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            + +   Y  +IDGLCK  +++ A  LF  + +  L+ D   Y  ++
Sbjct: 337 LQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLM 383



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 181/355 (50%), Gaps = 9/355 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPNTVTYTTIIDGLCK 72
           G +P VFTYN +I+ +C+ G    A  LFEEM     +F G++  P+TVTY ++IDG  K
Sbjct: 90  GAKPTVFTYNIMIDCMCKEGDVEAARGLFEEM-----KFRGLI--PDTVTYNSMIDGFGK 142

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D     F +MKD    P+V+TYN+LI+ FC      +    F EM   G++PNVVS
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ +++  CK G M +A +    M ++G+ PN + Y +L+D +C  G ++ A  L   M 
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            +G + NV +Y+ LI+G C  +     L L  EM+   IK  VV +  L  GL +   V 
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322

Query: 253 RAFKLFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           +A   F  +    G+ A+   Y   IDGLCK   +  A  LF  +       D  AY  L
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +DG  K G +  A  L   +    +  D++ Y  ++  L    ++ KAR    +M
Sbjct: 383 MDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEM 437



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 171/330 (51%), Gaps = 7/330 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +++  G  P+  TYN++I+G  + G     +  FEEM +      + C+P+ +T
Sbjct: 114 ARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVIT 167

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I+  CK G + K  E F +MK   + PNVV+Y++L+  FC      +A   +++M 
Sbjct: 168 YNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 227

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ PN  ++  +++  CK G + +A RL   M+Q+GV  N   Y  L+DG C      
Sbjct: 228 RVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPT 287

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTL 241
               L   M  +  K  V ++ +LI+G CKNK +  A+  +  + +  G++ +  IY  +
Sbjct: 288 EGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAM 347

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL + +QVE A  LF++M + G+  D  AY + +DG  K G ++EA+ L   +     
Sbjct: 348 IDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGM 407

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           +LD+ AY  L+ GL    +L+ A      +
Sbjct: 408 KLDLLAYTSLVWGLSHCNQLQKARSFLEEM 437



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/309 (30%), Positives = 157/309 (50%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           VC P    +  +   L   G V++A + F KMK   + P   + N L+H F      +  
Sbjct: 20  VCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGV 79

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           K  F +M+  G +P V ++N++++ +CK G ++ A  L E M   G+ P+   YN+++DG
Sbjct: 80  KRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDG 139

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           F   GR++     F  M+ M C+ +V +Y+ LIN +CK  ++   L  + EM   G+KP+
Sbjct: 140 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPN 199

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           VV Y+TL     +   +++A K + +M+R G+  + + Y + ID  CK G + +A  L  
Sbjct: 200 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLAN 259

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +  +  E ++  Y  LIDGLC          L   +    +   VVT+ ++I  LC + 
Sbjct: 260 EMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNK 319

Query: 355 KMDKARDLF 363
            + KA D F
Sbjct: 320 LVSKAIDYF 328



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 162/338 (47%), Gaps = 44/338 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +    F +++   CEP+V TYN LIN  C+ G     L  F EM   NG      KPN V
Sbjct: 148 DTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKR-NG-----LKPNVV 201

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+T++D  CKEG + +A + ++ M+   + PN  TY SLI  +C   + ++A  L  EM
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---------------------- 159
           +  GV+ NVV++  +++ LC      E   LL+ M+++                      
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321

Query: 160 --------------GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                         G++ NA +Y  ++DG C   +V  A  LF  M   G   +  +Y+ 
Sbjct: 322 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTS 381

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L++G  K   +  AL+L  +M+  G+K D++ Y +L  GL   +Q+++A    +EM   G
Sbjct: 382 LMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEG 441

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           +  D     + +    + G I EAVEL   L  +K++L
Sbjct: 442 IHPDEVLCISVLKKHYELGCINEAVELQSYL--MKHQL 477



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 67/152 (44%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +E A+  +S+M    + P     N L     ++ + +   + F +M   G     + Y  
Sbjct: 41  VEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNI 100

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            ID +CK G +  A  LF  ++      D   YN +IDG  K GRL      F  +    
Sbjct: 101 MIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC 160

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              DV+TYN +I+  C  GK+ K  + F +M+
Sbjct: 161 CEPDVITYNALINCFCKFGKLPKGLEFFREMK 192



 Score = 57.8 bits (138), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%)

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P   +++ LF  L ++  VE A + F +M+R  V   T +    +    K G        
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F+ +     +  +  YN +ID +CK G ++ A  LF  +    LI D VTYN MI     
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 353 DGKMDKARDLFLDME 367
            G++D     F +M+
Sbjct: 143 VGRLDDTVCFFEEMK 157


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 200/368 (54%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++  FG  P+V ++  LI G CR G    AL +++EM +         KP+ V
Sbjct: 183 KAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG------IKPDLV 236

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +++ +I    + G +D A     +M+   + P+ V Y  +I GFC A   ++A  +  EM
Sbjct: 237 SFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEM 296

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++N ++N LCK  ++ +A  LL  M + GV P+   + TL+ G+C+ G++
Sbjct: 297 VGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKL 356

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A +LF +M +   + ++ +Y+ LI+G C+  +++ A  L+ +M S+ I P+ V Y+ L
Sbjct: 357 DKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSIL 416

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E  QVE AF   DEM   G+  +   Y + I G C++G + +  +  + + + K 
Sbjct: 417 IDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN LI G  K  ++  A++L   + +  +  DVVTYN++I+     G + +A  
Sbjct: 477 SPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGW 536

Query: 362 LFLDMEAK 369
           +F  M AK
Sbjct: 537 IFEKMCAK 544



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 193/369 (52%), Gaps = 14/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  ++ ++R  G +P++ +++ LI    R G    A+    EM      FG+V  P+ V
Sbjct: 218 EALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC----FGLV--PDGV 271

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENIN----PNVVTYNSLIHGFCYANDWNEAKCL 117
            YT +I G C+ G +  A    L+++DE +     P+VVTYN+L++G C      +A+ L
Sbjct: 272 IYTMVIGGFCRAGLMSDA----LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 327

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM ++GV P++ +F  +++  C  GK+D+A +L + M+   +RP+   YNTL+DG C 
Sbjct: 328 LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 387

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G +++A +L+  M S     N  +YSILI+ +C+  ++E A     EM++KGI P+++ 
Sbjct: 388 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 447

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN++  G      V +  K   +M  + V+ D   Y T I G  K   + +A +L   + 
Sbjct: 448 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 507

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K + D+  YN LI+G    G ++ A  +F  +    +  D  TY  MI+     G   
Sbjct: 508 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSK 567

Query: 358 KARDLFLDM 366
           +A  L  +M
Sbjct: 568 EAFQLHDEM 576



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 184/345 (53%), Gaps = 8/345 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK-PNTVTYTTIIDGLCKEG 74
           E N +T N +++  C+      AL  F+++     E    C  P+ VT+  ++D   + G
Sbjct: 92  EVNTYTLNIMVHNYCK------ALE-FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAG 144

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
             + A  L   M  + + P +VTYNS++ G C +  W++A  +F EM D GV P+V SF 
Sbjct: 145 DAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFT 204

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++   C+ G+++EA ++ + M   G++P+   ++ L+  F   G+++ A      M   
Sbjct: 205 ILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCF 264

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +   Y+++I G+C+   +  AL +  EM+  G  PDVV YNTL  GL +  ++  A
Sbjct: 265 GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 324

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L +EM+  GV  D   + T I G C  G + +A++LF T+   +   DI  YN LIDG
Sbjct: 325 EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 384

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +C+ G L  A +L+  +    +  + VTY+I+I + C  G+++ A
Sbjct: 385 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 429



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 170/339 (50%), Gaps = 6/339 (1%)

Query: 31  RTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
           R G   +A + +  + + N E       NT T   ++   CK    DK   +  +M+   
Sbjct: 72  RAGWPHLAADAYRLVFSSNSEV------NTYTLNIMVHNYCKALEFDKVDAVISEMEKRC 125

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P+VVT+N ++     A D   A  L   M+ +G++P +V++N ++  LC++G  D+A 
Sbjct: 126 VFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAW 185

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            + + M   GV P+   +  L+ GFC  G +  A +++  M   G K ++ S+S LI  +
Sbjct: 186 EVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLF 245

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  +++ A++   EM   G+ PD VIY  +  G      +  A ++ DEM   G   D 
Sbjct: 246 ARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDV 305

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y T ++GLCK   +++A  L   +R      D+  +  LI G C  G+L  A +LF +
Sbjct: 306 VTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDT 365

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    L  D+VTYN +I  +C  G +DKA DL+ DM ++
Sbjct: 366 MLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSR 404



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 87/265 (32%), Positives = 149/265 (56%), Gaps = 6/265 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++R  G  P++ T+ TLI+G C  G    AL LF+ M N         +P+ 
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR------LRPDI 375

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+IDG+C++G +DKA +L+  M    I PN VTY+ LI   C      +A     E
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ PN++++N I+   C++G + +  + L+ M+   V P+   YNTL+ G+    +
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A +L   ME    + +V +Y++LING+  +  ++ A  ++ +M +KGI+PD   Y +
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG 265
           +  G       + AF+L DEM + G
Sbjct: 556 MINGHVTAGNSKEAFQLHDEMLQRG 580



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/280 (23%), Positives = 133/280 (47%)

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
           +E+   +   +  P    ++ LI  +  +    EA   F  ++D  V     + N ++  
Sbjct: 10  REIVSSLLGSSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAA 69

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L + G    A+    L+       N +  N ++  +C     ++ + +   ME      +
Sbjct: 70  LSRAGWPHLAADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPD 129

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V +++++++   +  + E A++L   M+SKG+KP +V YN++  GL      ++A+++F 
Sbjct: 130 VVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFK 189

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           EM   GVA D  ++   I G C+ G I EA+++++ +R    + D+ +++CLI    + G
Sbjct: 190 EMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRG 249

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++  A    R +    L+ D V Y ++I   C  G M  A
Sbjct: 250 KMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 289


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  196 bits (497), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 190/359 (52%), Gaps = 12/359 (3%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M LR  G  P+V+TYN +I+G C++G    AL + + +   NG     C P+  TY  +I
Sbjct: 221 MPLR--GVVPSVWTYNAMIDGYCKSGRMKDALGI-KALMERNG-----CNPDDWTYNILI 272

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            GLC E   D+A+EL          P V+T+ ++I+G+C A   ++A  +   M+    +
Sbjct: 273 YGLCGEK-PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCK 331

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
            ++ ++ V++N L K  +  EA   +  M   G+ PN  +Y +++DG+C  G+V  A E+
Sbjct: 332 LDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEV 391

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  ME  GC+ N ++YS LI G  +++++  A++L ++M   GI P V+ Y TL  G  +
Sbjct: 392 FRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 451

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
            H+ + AF+LF+ M+++G+  D  AY      LCK+G   EA        ++   L    
Sbjct: 452 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVV---LTKVT 508

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y  L+DG  K+G    A  L   +      AD  TY++++ ALC   K+++A  +   M
Sbjct: 509 YTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQM 567



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 197/423 (46%), Gaps = 68/423 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     ++   G  PNV  Y ++I+G C+ G    AL +F  M +        C+PN  
Sbjct: 352 EAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG------CRPNAW 405

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I GL ++  + KA  L  KM+++ I P V+TY +LI G C  ++++ A  LF EM
Sbjct: 406 TYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLF-EM 464

Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+Q G+ P+  ++NV+ + LCK+G+ +EA   L   ++ GV      Y +L+DGF   G 
Sbjct: 465 MEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGN 521

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS------------------- 221
            + A  L   M + GCK + ++YS+L+   CK K++  ALS                   
Sbjct: 522 TDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTI 581

Query: 222 ----------------LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                           +++EM+S G KP    Y        +I Q+E A  L  EM+R G
Sbjct: 582 IISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 641

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLR----------------ILKYELD---IR 306
           VA D   Y  FI+G    GY+  A   F TL+                +LK+ L    + 
Sbjct: 642 VAPDVVTYNVFINGCGHMGYMDRA---FSTLKRMIDASCEPNYWTYWILLKHFLKMSLVD 698

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           A+     G+     L   W+L   + +  L    VTY+ +I   C   ++++A  LF  M
Sbjct: 699 AHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHM 758

Query: 367 EAK 369
             K
Sbjct: 759 RGK 761



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 115/407 (28%), Positives = 174/407 (42%), Gaps = 42/407 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANG--------NGEF 52
           +A AL  K++  G  P V TY TLI G C+      A  LFE M  NG        N   
Sbjct: 422 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 481

Query: 53  GVVCKP-----------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV 95
             +CK                    VTYT+++DG  K G  D A  L  KM +E    + 
Sbjct: 482 HALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADS 541

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
            TY+ L+   C     NEA  +  +M   GV+ N+V++ +I++E+ K GK D A  +   
Sbjct: 542 YTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNE 601

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           MI  G +P+A  Y   +  +C  G++  AE L   ME  G   +V +Y++ ING      
Sbjct: 602 MISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGY 661

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLF-----IGLFEIHQVERA-----------FKLFD 259
           ++ A S    M+    +P+   Y  L      + L + H V+ +           ++L +
Sbjct: 662 MDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLE 721

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M +HG+      Y + I G CK   + EA  LF  +R      +   Y  LI   C   
Sbjct: 722 RMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIK 781

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               A      +        + +Y+ +I  LC +G  DKA+ LF D+
Sbjct: 782 LFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDL 828



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 162/339 (47%), Gaps = 36/339 (10%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+ N  +YT +I GLC+   V +A  L + M  +  + N+ TY  LI G C     + A+
Sbjct: 156 CRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGAR 215

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +  EM  +GV P+V ++N +++  CK+G+M +A  +  LM + G  P+ + YN L+ G 
Sbjct: 216 RVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGL 275

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------------- 222
           C   + + AEEL       G    V +++ +INGYCK + I+ AL +             
Sbjct: 276 C-GEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDL 334

Query: 223 ----------------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
                                  SEM + G+ P+VVIY ++  G  ++ +V  A ++F  
Sbjct: 335 QAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRL 394

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G   + W Y + I GL ++  + +A+ L   ++       +  Y  LI G CK   
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              A+ LF  + +  L  D   YN++ HALC  G+ ++A
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA 493



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 157/361 (43%), Gaps = 23/361 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L  K+   GC+ + +TY+ L+  LC+      AL++ ++M       GV C  N V 
Sbjct: 525 AAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLS----GVKC--NIVA 578

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT II  + KEG  D AK +F +M      P+  TY   I  +C      EA+ L  EM 
Sbjct: 579 YTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEME 638

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC------ 176
             GV P+VV++NV +N     G MD A   L+ MI     PN + Y  L+  F       
Sbjct: 639 RDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVD 698

Query: 177 -----LTGRVNRAE-----ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
                 +G  N  E     +L   M   G      +YS +I G+CK   +E A  L+  M
Sbjct: 699 AHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHM 758

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
             K I P+  IY  L     +I    +A     +M   G      +Y   I GLC  G  
Sbjct: 759 RGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDY 818

Query: 287 VEAVELF-RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
            +A  LF   L +  Y  +  A+  L DGL K+G +    +L  ++       D  TY++
Sbjct: 819 DKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSM 878

Query: 346 M 346
           +
Sbjct: 879 V 879



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 78/258 (30%), Positives = 114/258 (44%), Gaps = 34/258 (13%)

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           G + +A  LL +M  +G R N + Y  L+ G C T  V  A  L V M   GC  N+ +Y
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTY 198

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           ++LI G CK   I GA  +  EM  +G+ P V  YN +  G  +  +++ A  +   M+R
Sbjct: 199 TLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMER 258

Query: 264 HGVAADTWAYRTFIDGLCK-----------------------------NGY-----IVEA 289
           +G   D W Y   I GLC                              NGY     I +A
Sbjct: 259 NGCNPDDWTYNILIYGLCGEKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDA 318

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           + +  ++     +LD++AY  LI+ L K  R K A E    +    L  +VV Y  +I  
Sbjct: 319 LRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDG 378

Query: 350 LCADGKMDKARDLFLDME 367
            C  GK+  A ++F  ME
Sbjct: 379 YCKVGKVGAALEVFRLME 396



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 114/263 (43%), Gaps = 23/263 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+V TYN  ING    G+   A +  + M + +      C+PN  
Sbjct: 629 EAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDAS------CEPNYW 682

Query: 62  TYTTIIDGLCKEGFVDK----------------AKELFLKMKDENINPNVVTYNSLIHGF 105
           TY  ++    K   VD                   +L  +M    +NP  VTY+S+I GF
Sbjct: 683 TYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGF 742

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C A    EA  LF  M  + + PN   + +++   C      +A   +  MI+ G +P+ 
Sbjct: 743 CKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHL 802

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             Y+ L+ G C  G  ++A+ LF  +  M    HN  ++ IL +G  K   ++    L S
Sbjct: 803 ESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLS 862

Query: 225 EMLSKGIKPDVVIYNTLFIGLFE 247
            M ++  + D   Y+ +   + E
Sbjct: 863 AMENRHCQIDSETYSMVTDNIHE 885


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/369 (31%), Positives = 182/369 (49%), Gaps = 12/369 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME+ A  M  R      N+ TY TLIN  C  G    +      +      F     P++
Sbjct: 60  MESFASRMPAR------NLRTYTTLINAYCLAGDLPASKRHLSSLLRAG--FA----PDS 107

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             YT+ + G C+ G +  A  LF+ M          TY +L+HG C A    EA  +F  
Sbjct: 108 HAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAG 167

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+   +  +++ LC  G+  EA  LL   +  G  PN  VYN L+DG+C  G 
Sbjct: 168 MQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGD 227

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++F  M+  GC  NV +Y+ LI+G+CK+++++ A+ L+S M+  G+ P+VV Y  
Sbjct: 228 LELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTA 287

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G     Q++ A++L   M+  G+  + W     ID LCK+  + EA  L  +L    
Sbjct: 288 LIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKG 347

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +++   Y  LIDGLCK+GR   A  L ++L     + D  TY+ +I  LC   ++ +A 
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM 407

Query: 361 DLFLDMEAK 369
            +  DM  K
Sbjct: 408 LVLDDMMEK 416



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/330 (33%), Positives = 170/330 (51%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L       G EPNV  YN LI+G C  G   +A+++FE M + NG     C PN  
Sbjct: 195 EAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERM-DVNG-----CSPNVR 248

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G CK   +D+A  LF +M D  + PNVVTY +LI G C     + A  L   M
Sbjct: 249 TYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSM 308

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN  + +V+++ LCK+ ++ EA  LL  +IQ G++ N  VY +L+DG C  GR 
Sbjct: 309 ENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRF 368

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ L  ++ S G   +  +YS LI+G C+ KE+  A+ +  +M+ KG++P  V Y  +
Sbjct: 369 AAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTII 428

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L      + + K+ D+M   G+  D + Y  F+   C  G + +A  +   +     
Sbjct: 429 IDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGV 488

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
             ++  YN LI G    G    A+  F+ +
Sbjct: 489 CPNLVTYNALICGYANLGLTSQAFSTFKHM 518



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/366 (30%), Positives = 179/366 (48%), Gaps = 8/366 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
            A  LF+ + + GC    FTY  L++GLC  G    A+++F  M A+G       C P+ 
Sbjct: 125 HACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADG-------CAPDP 177

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y T++ GLC  G   +A+ L      E   PNVV YN+LI G+C   D   A  +F  
Sbjct: 178 HVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFER 237

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PNV ++  +++  CK+ K+D A  L   M+  G+ PN   Y  L+ G C  G+
Sbjct: 238 MDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQ 297

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  L  SME+ G   N ++ S+LI+  CK++ +  A  L   ++ KGIK + ++Y +
Sbjct: 298 LDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTS 357

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +   A +L   +   G   D   Y + IDGLC+   + EA+ +   +    
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +     Y  +ID L +      + ++   +    +  DV TY I + + C +G+M+ A 
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAE 477

Query: 361 DLFLDM 366
            + L M
Sbjct: 478 HMMLHM 483



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 176/368 (47%), Gaps = 8/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNT 60
           EA ++F  ++  GC P+   Y T+++GLC  G T  A  L  + MA G        +PN 
Sbjct: 160 EAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGF-------EPNV 212

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +IDG C  G ++ A ++F +M     +PNV TY  LI GFC +   + A  LF  
Sbjct: 213 VVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSR 272

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D G+ PNVV++  ++   C +G++D A RLL+ M   G+ PN +  + L+D  C   R
Sbjct: 273 MVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHER 332

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A+ L  S+   G K N   Y+ LI+G CK      A  L   ++S+G  PD   Y++
Sbjct: 333 VGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSS 392

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL    ++  A  + D+M   GV      Y   ID L +      + ++   +    
Sbjct: 393 LIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAG 452

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D+  Y   +   C  GR++ A  +   +    +  ++VTYN +I      G   +A 
Sbjct: 453 IKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAF 512

Query: 361 DLFLDMEA 368
             F  M A
Sbjct: 513 STFKHMVA 520



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 165/355 (46%), Gaps = 6/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   Y + + G CR G    A  LF  M          C     TYT ++ GLC  
Sbjct: 102 GFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRG------CVRTAFTYTALLHGLCGA 155

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  +F  M+ +   P+   Y +++HG C A    EA+ L  + M +G +PNVV +
Sbjct: 156 GMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVY 215

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C  G ++ A  + E M   G  PN   Y  L+ GFC + +++RA  LF  M  
Sbjct: 216 NALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVD 275

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   NV +Y+ LI G C + +++ A  L   M + G+ P+    + L   L +  +V  
Sbjct: 276 AGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGE 335

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L   + + G+  +   Y + IDGLCK G    A  L +TL    +  D   Y+ LID
Sbjct: 336 AQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLID 395

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           GLC+   L  A  +   +    +    VTY I+I  L  +   D ++ +   M A
Sbjct: 396 GLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIA 450



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 181/448 (40%), Gaps = 80/448 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
            A  LF ++   G  PNV TY  LI G C  G    A  L + M N              
Sbjct: 265 RAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLI 324

Query: 50  ---------GEFGVV--------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                    GE  ++         K N + YT++IDGLCK G    A  L   +  +   
Sbjct: 325 DALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFV 384

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  TY+SLI G C   + +EA  +  +MM++GVQP+ V++ +I++EL +    D + ++
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKI 444

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L+ MI  G++P+ F Y   +  +C  GR+  AE + + M   G   N+ +Y+ LI GY  
Sbjct: 445 LDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYAN 504

Query: 213 NKEIEGALSLYSEMLSKGIKP--------------------------------------- 233
                 A S +  M++ G KP                                       
Sbjct: 505 LGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHG 564

Query: 234 ------------DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
                       ++ IYN     L  + +++ A  L  EMQ   +      Y + I   C
Sbjct: 565 LLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCC 624

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           +   + EA+    ++    Y   + +Y  +I  LC+ G ++ A ++F  +       + +
Sbjct: 625 RLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEI 684

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
            + I+I  L   G + +   L   ME K
Sbjct: 685 AWRILIDGLLQKGYVAECSSLLSVMEEK 712



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 24/257 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A  + + +   G  PN+ TYN LI G    G T  A + F+ M ANG       CKPN 
Sbjct: 475 DAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANG-------CKPNE 527

Query: 61  VTYTTIIDGLCKEGFVDKAKE----------------LFLKMKDENINPNVVTYNSLIHG 104
            +YT ++  L K+   +                    L  +M    +   +  YN  +  
Sbjct: 528 ESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTS 587

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C  +  +EAK L IEM    + P+   +  I+   C+   + EA   ++ M++ G  P 
Sbjct: 588 LCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQ 647

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              Y  ++   C  G +  A+++F  M S    +   ++ ILI+G  +   +    SL S
Sbjct: 648 LESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLS 707

Query: 225 EMLSKGIKPDVVIYNTL 241
            M  K  +P   +Y  L
Sbjct: 708 VMEEKNYRPSDALYARL 724



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 6/150 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L ++++     P+   Y ++I   CR      AL   + M       G +  P   
Sbjct: 596 EAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKS----GYI--PQLE 649

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  II  LC+EG +  AK++F  M  +  N   + +  LI G        E   L   M
Sbjct: 650 SYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVM 709

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            ++  +P+   +  +  ++     + E +R
Sbjct: 710 EEKNYRPSDALYARLTGKITDANDIQEIAR 739


>gi|125555763|gb|EAZ01369.1| hypothetical protein OsI_23402 [Oryza sativa Indica Group]
          Length = 619

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 190/387 (49%), Gaps = 28/387 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +LF +++  GC P+V T+N+LI+G  + G       L EEM          CK + V
Sbjct: 206 EARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSG------CKADVV 259

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+  CK G ++ A   F  MK E +  NVVT+++ +  FC      EA  LF +M
Sbjct: 260 TYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQM 319

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+  N  ++  +++  CK G++D+A  LL+ M++ GV  N   Y  L+DG C   +V
Sbjct: 320 RVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKV 379

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE++   ME  G + N   Y+ LI+G+  NK  E AL L SEM +KG++ D+ +Y  L
Sbjct: 380 AEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGAL 439

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK------------------- 282
             GL  +H+++ A  L  +M   G+  +   Y T +D   K                   
Sbjct: 440 IQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGF 499

Query: 283 ---NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
              NG + EAV+LF  +      LD   Y  L+DG  K G L  A+ L   +    L  D
Sbjct: 500 QPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLD 559

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
           +  Y   I   C    M +AR++F +M
Sbjct: 560 LFCYTCFISGFCNLNMMPEAREVFSEM 586



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/359 (33%), Positives = 179/359 (49%), Gaps = 13/359 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A A   +LRV    PN  T N ++  L R     +   LFE++            PN 
Sbjct: 142 VRAVARVRELRV---PPNTRTCNHILLRLARDRSGRLVRRLFEQLP----------APNV 188

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  +ID LCKEG + +A+ LF +MK+    P+VVT+NSLI G+    + +E + L  E
Sbjct: 189 FTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEE 248

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G + +VV++N ++N  CK G+M+ A      M + GV  N   ++T +D FC  G 
Sbjct: 249 MRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGL 308

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A +LF  M   G   N F+Y+ LI+G CK   ++ A+ L  EM+ +G+  +VV Y  
Sbjct: 309 VREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTV 368

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +V  A  +   M++ GV A+   Y T I G   N    +A+ L   ++   
Sbjct: 369 LVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKG 428

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ELDI  Y  LI GLC   +L  A  L   +    L  + + Y  M+ A    GK+ +A
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEA 487



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 178/368 (48%), Gaps = 28/368 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L  ++R  GC+ +V TYN LIN  C+ G    A   F  M       GV+   N V
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKRE----GVMA--NVV 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++T +D  CKEG V +A +LF +M+   +  N  TY  LI G C A   ++A  L  EM
Sbjct: 295 TFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QGV  NVV++ V+++ LCK  K+ EA  +L +M + GVR N  +Y TL+ G  +    
Sbjct: 355 VRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNS 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  L   M++ G + ++  Y  LI G C   +++ A SL ++M   G++P+ +IY T+
Sbjct: 415 EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTM 474

Query: 242 FIGLFEIHQVERAF----------------------KLFDEMQRHGVAADTWAYRTFIDG 279
               F+  +V  A                       +LF+EM   G++ D   Y   +DG
Sbjct: 475 MDACFKSGKVPEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 534

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
             K G + +A  L   +     +LD+  Y C I G C    +  A E+F  +    +  D
Sbjct: 535 YLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPD 594

Query: 340 VVTYNIMI 347
              YN +I
Sbjct: 595 RAVYNCLI 602



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 156/305 (51%), Gaps = 4/305 (1%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++  L   G +D A     ++++  + PN  T N ++            + LF    +Q
Sbjct: 127 TLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLF----EQ 182

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
              PNV +FN++++ LCK G++ EA  L   M ++G  P+   +N+L+DG+   G ++  
Sbjct: 183 LPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEV 242

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
           E+L   M   GCK +V +Y+ LIN +CK   +E A   ++ M  +G+  +VV ++T    
Sbjct: 243 EQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   V  A KLF +M+  G+A + + Y   IDG CK G + +A+ L   +      L+
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y  L+DGLCK  ++  A ++ R + +  + A+ + Y  +IH    +   +KA  L  
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 365 DMEAK 369
           +M+ K
Sbjct: 423 EMKNK 427



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 154/310 (49%), Gaps = 4/310 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PNT T   I+  L +    D++  L  ++ ++   PNV T+N +I   C   +  EA+ L
Sbjct: 155 PNTRTCNHILLRLAR----DRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSL 210

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M + G  P+VV+FN +++   K G++DE  +L+E M + G + +   YN L++ FC 
Sbjct: 211 FSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCK 270

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR+  A   F +M+  G   NV ++S  ++ +CK   +  A+ L+++M  +G+  +   
Sbjct: 271 FGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFT 330

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G  +  +++ A  L DEM R GV  +   Y   +DGLCK   + EA ++ R + 
Sbjct: 331 YTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMME 390

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +   Y  LI G   +   + A  L   +    L  D+  Y  +I  LC   K+D
Sbjct: 391 KAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450

Query: 358 KARDLFLDME 367
           +A+ L   M+
Sbjct: 451 EAKSLLTKMD 460



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 131/265 (49%), Gaps = 31/265 (11%)

Query: 134 NVIMNELCKNGKMDEA----SRLLELMIQIGVR--------------------------- 162
           + +++ L   G +D+A    +R+ EL +    R                           
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN F +N ++D  C  G +  A  LF  M+ MGC  +V +++ LI+GY K  E++    L
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             EM   G K DVV YN L     +  ++E A+  F  M+R GV A+   + TF+D  CK
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + EA++LF  +R+    L+   Y CLIDG CK+GRL  A  L   + R  +  +VVT
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 343 YNIMIHALCADGKMDKARDLFLDME 367
           Y +++  LC + K+ +A D+   ME
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMME 390



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 138/307 (44%), Gaps = 63/307 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++RV G   N FTY  LI+G C+ G    A+ L +EM             N V
Sbjct: 311 EAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL------NVV 364

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG----------------- 104
           TYT ++DGLCKE  V +A+++   M+   +  N + Y +LIHG                 
Sbjct: 365 TYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEM 424

Query: 105 ------------------FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                              C  +  +EAK L  +M + G++PN + +  +M+   K+GK+
Sbjct: 425 KNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKV 484

Query: 147 DEASRLLELMIQIGVRPN----------------------AFVYNTLMDGFCLTGRVNRA 184
            EA  +L+ ++  G +PN                        VY  L+DG+   G ++ A
Sbjct: 485 PEAIAMLQKILDSGFQPNNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDA 544

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M   G + ++F Y+  I+G+C    +  A  ++SEM+  GI PD  +YN L   
Sbjct: 545 FALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLITQ 604

Query: 245 LFEIHQV 251
           + EI ++
Sbjct: 605 IPEIREL 611


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 205/373 (54%), Gaps = 12/373 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLIN--GLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           EA  L  K++ F C P+  +YNT+++   LCR+G T  +++   E+     E G+V  P+
Sbjct: 210 EAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELL----ESGLV--PH 263

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            +TY TII G C+EG V+KA +   KM +++  P++ T N L+ G C     + A  LF 
Sbjct: 264 QITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFN 323

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC-LT 178
             + +G   + V++N I++ LCK G+ +EA  LL  M +  + P+ + YN ++       
Sbjct: 324 TWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAE 383

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+V +A +    M     K ++F+ +IL+ G C    ++ AL L++  +SKG   D V Y
Sbjct: 384 GQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTY 443

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           NT+  GL +  + E AF L  EM+ ++G+  D   Y T I G C+ G + +A +    + 
Sbjct: 444 NTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMV 503

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKM 356
              ++ D+   N L+ GLC+ G L  A +LF + + +G  I D VTYN +I  LC +G+ 
Sbjct: 504 EKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAI-DAVTYNTIISGLCKEGRF 562

Query: 357 DKARDLFLDMEAK 369
           ++A DL  +M+ K
Sbjct: 563 EEAFDLLAEMKEK 575



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 27/317 (8%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHG----------------------FCYANDWNEAKC 116
           A ++F +MK  ++ PN++T N+LI+                       F   N  +EA  
Sbjct: 154 AAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIG 213

Query: 117 LFIEMMDQGVQPNVVSFNVIMN--ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           L  +M D    P+  S+N I++   LC++GK D++   L  +++ G+ P+   YNT++ G
Sbjct: 214 LIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHG 273

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           +C  G+V +A +    M     K ++F+ +IL+ G C    ++ AL L++  +SKG   D
Sbjct: 274 YCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAID 333

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
            V YNT+  GL +  + E AF L  EM+   +  D + Y   +  L      VE    FR
Sbjct: 334 AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFR 393

Query: 295 TLRILK-YELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCA 352
              + K ++ D+   N L+ GLC  G L  A +LF + + +G  I D VTYN +I  LC 
Sbjct: 394 NKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAI-DAVTYNTIISGLCK 452

Query: 353 DGKMDKARDLFLDMEAK 369
           +G+ ++A DL  +ME K
Sbjct: 453 EGRFEEAFDLLAEMEEK 469



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 90/168 (53%), Gaps = 5/168 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +  TYNT+I+GLC+ G    A +L  EM   NG       P+  TY TII G C+EG V+
Sbjct: 439 DAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLV-----PDQTTYNTIILGYCREGQVE 493

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA +   KM +++  P++ T N L+ G C      +A  LF   + +G   + V++N I+
Sbjct: 494 KAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTII 553

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + LCK G+ +EA  LL  M +  + P+ + YN ++      GR+   E
Sbjct: 554 SGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEAEE 601


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  GC PN  TYN L+NGL + G    A  L EEM N           +  
Sbjct: 233 QALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG------LNVSAY 286

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+G C++G   +A +L  +M +    P + TYN+L++G C        +  F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     P++VSFN ++   C+ G + EA  L + +    + P    YNTL+ G C+ G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   ++F+Y+IL+NG  K   +  A   ++EMLSKG+KPD   YNT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            +G  +I     AF + +EM   G   D   Y  F+  LC+ G   EA +L   +     
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y  +I+G  K+G L+ A E+F  +    +   VVTY ++IHA  A   +D A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 362 LFLDMEAK 369
            F  M  K
Sbjct: 587 YFSKMLEK 594



 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G   + +TYN LING C+ G  + A +L EEM N          P   
Sbjct: 268 QAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRA------FPTLS 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ GLCK   V   +  F  M      P++V++NSL++G+C     +EA  LF E+
Sbjct: 322 TYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL 381

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P V+++N +++ LC  G +D A RL + M   G+ P+ F Y  L++G    G V
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYV 441

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   F  M S G K + F+Y+  I G  K  +   A S+  EML+ G  PDV+ YN  
Sbjct: 442 SMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVF 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +    E A  L + M   G+  D   Y + I+G  KNG++ +A E+F  +     
Sbjct: 502 VHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  Y  LI        L +A+  F  +    + A+V+TYN +I+ LC   +MD+A  
Sbjct: 562 APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYK 621

Query: 362 LFLDMEAK 369
            F +ME K
Sbjct: 622 YFDEMEEK 629



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 173/314 (55%), Gaps = 6/314 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +L+     P V TYNTLI+GLC  G+   AL L +EM +  G F     P+  
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD-QGLF-----PDIF 426

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++G  K G+V  A+  F +M  + + P+   YN+ I G     D + A  +  EM
Sbjct: 427 TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEM 486

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+V+++NV ++ LC+ G  +EA  LLE M+  G+ P+   Y ++++GF   G +
Sbjct: 487 LAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHL 546

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E+F  M S G   +V +Y++LI+ +   + ++ A   +S+ML K +  +V+ YN +
Sbjct: 547 RKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI 606

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +++ A+K FDEM+  G+  + ++Y   I+  C  GY  EA+ L+R +   K 
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI 666

Query: 302 ELDIRAYNCLIDGL 315
           + D   ++  +  L
Sbjct: 667 QPDSFTHSVFLKNL 680



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 165/330 (50%), Gaps = 5/330 (1%)

Query: 40  NLFEEMANGNG---EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           NL  +  N  G   +FG+  KP  VTY T++D  CKEG VD+A EL  +M++    PN V
Sbjct: 194 NLLSKAKNVYGMMEQFGI--KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           TYN L++G     +  +AK L  EM++ G+  +  ++N ++N  C+ G   EA  L+E M
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +     P    YNTLM G C   +V      F  M       ++ S++ L+ GYC+   I
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             A  L+ E+  + + P V+ YNTL  GL     ++ A +L  EM   G+  D + Y   
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           ++G  K GY+  A   F  +     + D  AYN  I G  K     +A+ +   +     
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
             DV+TYN+ +HALC  G  ++A DL  +M
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENM 521



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 129/250 (51%), Gaps = 6/250 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F ++   G +P+ F YNT I G  +   T VA ++ EEM            P+ +T
Sbjct: 444 ARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEM------LAAGFPPDVIT 497

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y   +  LC++G  ++A +L   M  + + P+ VTY S+I+GF       +A+ +F EM+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV P+VV++ V+++       +D A      M++  V  N   YN +++G C+T R++
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A + F  ME  G   N FSY+ILIN  C     E AL LY EML + I+PD   ++   
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 243 IGLFEIHQVE 252
             L   +QV 
Sbjct: 678 KNLHRDYQVH 687



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 143/288 (49%)

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +F KM    + P+V   N ++      N  ++AK ++  M   G++P VV++N +++  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G++D+A  LL  M + G  PN   YN L++G    G + +A+ L   M + G   + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LING+C+      A  L  EM+++   P +  YNTL  GL +  QV      F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            +     D  ++ + + G C+ G I EA  LF  L+       +  YN LI GLC  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             A  L + +    L  D+ TY I+++     G +  AR  F +M +K
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 15/215 (6%)

Query: 155 LMIQIGVRPNAFVYNTLMD---GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +M Q   + + FV+  ++D   G  L        E  VS E  G         +LI G+ 
Sbjct: 109 VMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGV------VDVLIAGHV 162

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
                   L ++ +M+  G+ PDV   N +   L + + + +A  ++  M++ G+     
Sbjct: 163 X------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVV 216

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y T +D  CK G + +A+EL   ++      +   YN L++GL K G L+ A  L   +
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               L     TYN +I+  C  G   +A DL  +M
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  195 bits (496), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 189/366 (51%), Gaps = 17/366 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + +A L ++LR +G  P+  + N +   LCR      A+ LF+E+           + NT
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLP-LDEAVQLFQELP----------EKNT 253

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++  LC  G +  A +LF +M      P+VVTY  ++HG+C  ++   A  L  E
Sbjct: 254 CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ N V++  ++  LC  G++ +A R++E M+  GV  +A V+ T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A   F  M+  G   +  +Y+ LING C+  E++ A  +  EM  KG+  D V Y  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++ ++  AF + ++M +  V  +   Y    DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            EL+I  YN LI+GLCK+G L+ A      +    L  DV TY  +I ALC   ++D+A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 361 DLFLDM 366
            L  +M
Sbjct: 551 SLLQEM 556



 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 6/357 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G E N   Y ++I  LC  G    A+ + E+M       GVV   +   
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM----HGVVL--DAAV 357

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT++ G C++G +  A+  F +M+   +  + VTY +LI+G C A +  EA+ +  EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+  + V++ V+++  CK GKM EA  +   M+Q  V PN   Y  L DG C  G V 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M S G + N+F+Y+ LING CK   +E A+    +M   G+KPDV  Y T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  +++RA  L  EM   G+      Y   ++G C +G +     L   +      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +   YN L+   C    +K   E+++ +    ++ +  TYNI+I   C    M +A
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 167/341 (48%), Gaps = 6/341 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F +++  G   +  TY  LINGLCR G    A  + +EM +   +       + VTYT +
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV------DAVTYTVL 431

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           IDG CK G + +A  +  KM  + + PNVVTY +L  G C   D   A  L  EM  +G+
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           + N+ ++N ++N LCK G +++A R +  M + G++P+ + Y T++   C +  ++RA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           L   M   G K  + +Y++L+NG+C +  +EG   L   ML K I P+   YN+L     
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
               ++   +++  M    V  +   Y   I G CK   + EA+     +    + L   
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +YN LI  L K  +   A  LF  + +  L A+   YN  I
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 153/312 (49%), Gaps = 6/312 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G + +  TY  LI+G C+ G    A  +  +M            PN V
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR------VTPNVV 461

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT + DGLCK+G V  A EL  +M  + +  N+ TYNSLI+G C A +  +A    I+M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++P+V ++  I+  LC++ ++D A  LL+ M+  G++P    YN LM+GFC++GRV
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              + L   M       N  +Y+ L+  YC  K ++    +Y  MLS+ + P+   YN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A     EM   G      +Y   I  L K     EA  LF  +R  + 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701

Query: 302 ELDIRAYNCLID 313
             +   YN  ID
Sbjct: 702 TAEPDVYNFYID 713



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 170/354 (48%), Gaps = 6/354 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
               P+V TY  +++G C       A+ L  EMA    E       N V YT++I  LC 
Sbjct: 279 MASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL------NPVAYTSVIALLCD 332

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V  A  +   M    +  +   + +++ GFC   D   A+  F EM  +G+  + V+
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++N LC+ G++ EA R+L+ M   G+  +A  Y  L+DG+C  G++  A  +   M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 NV +Y+ L +G CK  ++  A  L  EM SKG++ ++  YN+L  GL +   +E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A +   +M   G+  D + Y T I  LC++  +  A  L + +     +  I  YN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +G C SGR++    L   +    +  +  TYN ++   C +  M    +++  M
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 145/291 (49%), Gaps = 11/291 (3%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           +  L L+++   I+P+  + N+++         +EA  LF E+ ++    N  S+N+++ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLK 261

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LC  G++ +A +L +   ++   P+   Y  ++ G+C    +  A +L   M + G + 
Sbjct: 262 ALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N  +Y+ +I   C   ++  A+ +  +M+  G+  D  ++ T+  G      +  A   F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DEMQ+ G+AAD   Y   I+GLC+ G + EA  + + +     ++D   Y  LIDG CK 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G++  A+ +   + +  +  +VVTY  +   LC  G +  A +L  +M +K
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489


>gi|255554881|ref|XP_002518478.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542323|gb|EEF43865.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 196/362 (54%), Gaps = 4/362 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA ++  +    G  PNV T+N +I+G  + G   +AL L  +M   +G      KP++
Sbjct: 180 VEAVSVIYRSLKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSG---CSVKPDS 236

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY + ++G CK G +  A+E   +M  + I PNV TY +L+ G+        A  L  E
Sbjct: 237 VTYNSFVNGFCKIGNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDE 296

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++++G+ PN V +N I++ L   G M+ AS LL  MI   + P+ F Y+ +++G C  G 
Sbjct: 297 LVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGY 356

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A +    +  M    + FS++++IN  C++  + GA  L + M  +G+ PDVV + T
Sbjct: 357 LNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGT 416

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +  +VE A +++++M + G   +   Y + I+G  K G    A+ L  TLR + 
Sbjct: 417 LIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYNSVINGFAKEGSFDPAILLIDTLRRMG 476

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+  YN LI G C  G++  A+ LF  +    ++A  VTYN +I++LC  G + +A+
Sbjct: 477 L-FDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSGILASHVTYNTLINSLCKAGHVLQAK 535

Query: 361 DL 362
           +L
Sbjct: 536 EL 537



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/392 (27%), Positives = 194/392 (49%), Gaps = 43/392 (10%)

Query: 3   AAALFMKLRVF-GC--EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           A  L  K+ V  GC  +P+  TYN+ +NG C+ G+  VA    +EM       G   +PN
Sbjct: 217 ALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKIGNLAVAEEFKKEM------LGKEIEPN 270

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY T++DG  + G ++ A  L  ++ ++ + PN V YNS+IH      D   A  L  
Sbjct: 271 VRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIYNSIIHWLSMEGDMEGASLLLS 330

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M+D+ + P+  ++++++  LC+NG ++EA + L++++++ +  +AF +N +++  C + 
Sbjct: 331 DMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILEMSLVRDAFSHNVVINYLCRSN 390

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP------ 233
            +  A++L  +M   G   +V ++  LI+ +CK+ ++E A+ +Y +M+  G KP      
Sbjct: 391 NLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVENAIQVYEKMIKTGEKPNLLIYN 450

Query: 234 ----------------------------DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                                       DVV YNTL  G     ++++AF LF EM+  G
Sbjct: 451 SVINGFAKEGSFDPAILLIDTLRRMGLFDVVTYNTLIHGYCNCGKIDQAFALFSEMRNSG 510

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           + A    Y T I+ LCK G++++A EL + + +     D   Y  LI    K    +   
Sbjct: 511 ILASHVTYNTLINSLCKAGHVLQAKELMKMMVLRGLIPDYVTYTILITSFSKKCSPEEVI 570

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           EL   +    ++ D  TY  M+  L  +  ++
Sbjct: 571 ELHDYMVLKGVVPDRQTYQTMVIPLLQEESVE 602



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 160/308 (51%), Gaps = 3/308 (0%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +   +  L K   V++  +++ +M       NV T+N +I+         EA  +    
Sbjct: 130 AWNNFLSHLLKLNDVNRFWKMYKEMVSYGYIENVNTFNLIIYALGKEGRLVEAVSVIYRS 189

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRL---LELMIQIGVRPNAFVYNTLMDGFCLT 178
           +  G+ PNVV+FN+I++   K G MD A +L   +E+M    V+P++  YN+ ++GFC  
Sbjct: 190 LKTGIWPNVVTFNMIIDGAIKMGAMDLALKLVRKMEVMSGCSVKPDSVTYNSFVNGFCKI 249

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  AEE    M     + NV +Y+ L++GY +   +E A  L  E++ KG+ P+ VIY
Sbjct: 250 GNLAVAEEFKKEMLGKEIEPNVRTYATLVDGYTRVGSLENAFRLCDELVEKGLLPNSVIY 309

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N++   L     +E A  L  +M    +  D + Y   I+GLC+NGY+ EA +  + +  
Sbjct: 310 NSIIHWLSMEGDMEGASLLLSDMIDKRIYPDQFTYSIVIEGLCRNGYLNEAFKFLQMILE 369

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           +    D  ++N +I+ LC+S  L  A +L  ++    L+ DVVT+  +I   C DGK++ 
Sbjct: 370 MSLVRDAFSHNVVINYLCRSNNLAGAKQLLANMYVRGLVPDVVTFGTLIDRHCKDGKVEN 429

Query: 359 ARDLFLDM 366
           A  ++  M
Sbjct: 430 AIQVYEKM 437


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 128/399 (32%), Positives = 200/399 (50%), Gaps = 32/399 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           EA AL   ++  G   +V TY TLI GLC       AL L  EM                
Sbjct: 133 EAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLL 192

Query: 49  -----NGEFGVVCK-----------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                +G +  V K           P+ + +T  ID LCK+G + KA ++   M    + 
Sbjct: 193 RGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLE 252

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTYN LI+  C      EA  L  EM D+GV P+VV++N ++  L    +MD A  L
Sbjct: 253 PNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGL 312

Query: 153 LELMIQ--IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           LE MIQ    V P+   +N+++ G C  GR+ +A  +   M   GC  N+ +Y+ LI G+
Sbjct: 313 LEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGF 372

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            +  ++  A++L SE++S G++PD   Y+ L  G  ++ +V+RA      M + G+ A+ 
Sbjct: 373 LRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAEL 432

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + Y   +  LC+ G + +A+ LF  +  +   LD  AY+ ++ G CKSG +K A +L + 
Sbjct: 433 FHYIPLLAALCQLGMMEQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQD 491

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    L  D VTY+I+I+     G +++A  +   M A 
Sbjct: 492 MLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAAS 530



 Score =  191 bits (485), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 187/350 (53%), Gaps = 7/350 (2%)

Query: 18  NVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           +  +YN ++  LCR G  +  AL+L  +M+    E     +PN V+YT ++ GLC     
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSR---EAHPAARPNAVSYTMVMRGLCASRRT 131

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A  L   M+   +  +VVTY +LI G C A + + A  L  EM   GV PNV+ ++ +
Sbjct: 132 DEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCL 191

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +   C++G+  + S++ E M ++GV P+  ++   +D  C  GR+ +A ++   M   G 
Sbjct: 192 LRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGL 251

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + NV +Y++LIN  CK   +  AL+L +EM  KG+ PDVV YNTL  GL  + +++ A  
Sbjct: 252 EPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMG 311

Query: 257 LFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           L +EM +    V  D   + + I GLCK G + +A+ +   +       ++  YN LI G
Sbjct: 312 LLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGG 371

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             +  ++ +A  L   L    L  D  TY+I+I+      ++D+A ++FL
Sbjct: 372 FLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRA-EMFL 420



 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 195/387 (50%), Gaps = 32/387 (8%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------CK------- 57
           G  PNV  Y+ L+ G CR+G       +FEEM+    E  V+         CK       
Sbjct: 180 GVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKA 239

Query: 58  -------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                        PN VTY  +I+ LCKEG V +A  L  +M D+ + P+VVTYN+LI G
Sbjct: 240 VKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAG 299

Query: 105 FCYANDWNEAKCLFIEMM--DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
                + + A  L  EM+  D  V+P+VV+FN +++ LCK G+M +A  + E+M + G  
Sbjct: 300 LSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCM 359

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
            N   YN L+ GF    +VN A  L   + S G + + F+YSILING+ K  E++ A   
Sbjct: 360 CNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMF 419

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
              M  +GI+ ++  Y  L   L ++  +E+A  LF+EM  +    D  AY T + G CK
Sbjct: 420 LRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN-CGLDAVAYSTMMYGACK 478

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           +G I  A +L + +       D   Y+ LI+   K G L+ A  + + +     + DV  
Sbjct: 479 SGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAV 538

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           ++ +I    A+G+++K  DL  +M AK
Sbjct: 539 FDSLIKGYSAEGQINKILDLIHEMRAK 565



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 184/357 (51%), Gaps = 10/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
              PN  +Y  ++ GLC +  T  A+ L   M A+G        + + VTY T+I GLC 
Sbjct: 110 AARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASG-------VRADVVTYGTLIRGLCD 162

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              +D A EL  +M    ++PNV+ Y+ L+ G+C +  W +   +F EM   GV+P+V+ 
Sbjct: 163 AAELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIM 222

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           F   +++LCK G++ +A ++ ++M+Q G+ PN   YN L++  C  G V  A  L   M+
Sbjct: 223 FTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMD 282

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIYNTLFIGLFEIHQ 250
             G   +V +Y+ LI G     E++GA+ L  EM+     ++PDVV +N++  GL +I +
Sbjct: 283 DKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGR 342

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           + +A  + + M   G   +   Y   I G  +   +  A+ L   L     E D   Y+ 
Sbjct: 343 MRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSI 402

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LI+G  K   +  A    R++ +  + A++  Y  ++ ALC  G M++A  LF +M+
Sbjct: 403 LINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMD 459



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 154/303 (50%), Gaps = 5/303 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   G  P+V TYNTLI GL        A+ L EEM  G+     + +P+ V
Sbjct: 273 EALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGD----TLVEPDVV 328

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ ++I GLCK G + +A  +   M +     N+VTYN LI GF   +  N A  L  E+
Sbjct: 329 TFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSEL 388

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++P+  ++++++N   K  ++D A   L  M Q G+R   F Y  L+   C  G +
Sbjct: 389 ISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMM 448

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  M+ M C  +  +YS ++ G CK+ +I+ A  L  +ML +G+ PD V Y+ L
Sbjct: 449 EQAMVLFNEMD-MNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSIL 507

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                ++  +E A ++  +M   G   D   + + I G    G I + ++L   +R    
Sbjct: 508 INMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNV 567

Query: 302 ELD 304
            +D
Sbjct: 568 AID 570



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 127/242 (52%), Gaps = 4/242 (1%)

Query: 129 NVVSFNVIMNELCKN-GKMDEASRLLELM---IQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           + VS+N+++  LC+  G + +A  LL  M        RPNA  Y  +M G C + R + A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L  SM++ G + +V +Y  LI G C   E++GAL L  EM   G+ P+V++Y+ L  G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
                + +   K+F+EM R GV  D   +  FID LCK G I +AV++   +     E +
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  YN LI+ LCK G ++ A  L   +    +  DVVTYN +I  L    +MD A  L  
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 365 DM 366
           +M
Sbjct: 315 EM 316



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 119/238 (50%), Gaps = 7/238 (2%)

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG-RVNRAEELFVSMES- 193
           ++N   +   + EA  LL  +  +    +A  YN ++   C  G  + +A  L   M   
Sbjct: 50  LLNRRLRAAPVTEACSLLSALPDVR---DAVSYNIVLAALCRRGGDLRQALSLLADMSRE 106

Query: 194 --MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
                + N  SY++++ G C ++  + A++L   M + G++ DVV Y TL  GL +  ++
Sbjct: 107 AHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAEL 166

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           + A +L  EM   GV  +   Y   + G C++G   +  ++F  +  L  E D+  +   
Sbjct: 167 DGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGF 226

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ID LCK GR+  A ++   + +  L  +VVTYN++I+ LC +G + +A  L  +M+ K
Sbjct: 227 IDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDK 284



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 6/126 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A +        C  +   Y+T++ G C++G    A  L ++M +          P+ 
Sbjct: 448 MEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEG------LAPDA 501

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +I+   K G +++A+ +  +M      P+V  ++SLI G+      N+   L  E
Sbjct: 502 VTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHE 561

Query: 121 MMDQGV 126
           M  + V
Sbjct: 562 MRAKNV 567


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/369 (32%), Positives = 190/369 (51%), Gaps = 7/369 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AA    ++   G + N+  Y+ +++G CR G T VA  L   +            PN V
Sbjct: 182 HAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKG------LSPNVV 235

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKD-ENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TYT ++ G CKEG +++A+++  ++K+ E I  + V Y +LI+G+C      +A  +  E
Sbjct: 236 TYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDE 295

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D GVQ N+  +N ++N  CK G+M E  +LL+     GV  + + YNTL+DG+C  G 
Sbjct: 296 MIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGF 355

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A E    M   G      +Y+ L+NG+C    I+ AL L+  ML +G+ P+ +  +T
Sbjct: 356 MTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCST 415

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G F+  + E+A  L+ E    G+A +     T I+GLCKN  + EA ELF  ++   
Sbjct: 416 LLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWS 475

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   Y  LIDG CK G L  A ++   +     +  V  +N  I  L    +  K  
Sbjct: 476 CPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVN 535

Query: 361 DLFLDMEAK 369
           D+ ++M AK
Sbjct: 536 DIRVEMSAK 544



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 195/392 (49%), Gaps = 32/392 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++ + C  +  TY TLI+G C+ G    A  +  EM N     G V  P+  
Sbjct: 463 EAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMEN----LGFV--PSVE 516

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + + I GL       K  ++ ++M  + ++PN VTY +LI G+C   + ++A  L+ EM
Sbjct: 517 MFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEM 576

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL-----MIQ--------IGV------- 161
           +++G++PN+   +V+++   + GK+DEA+ +L+      MIQ        IG        
Sbjct: 577 VEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIES 636

Query: 162 ------RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                 +    ++N ++ G C  GRV  A  LF  ++  G   + F+YS LI+G   +  
Sbjct: 637 LAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGS 696

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A  L  EMLS  + P++V YN+L  GL +   V RA  LF+++Q  G++ +   Y T
Sbjct: 697 IDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNT 756

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            IDG CK+G   EA +L + +     +  +  Y  LI GLC  G ++ A +L   +    
Sbjct: 757 LIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENN 816

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  + +TY  +I      G M     L+ +M 
Sbjct: 817 VDPNFITYWTLIQGYARCGNMKAITKLYNEMH 848



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/391 (29%), Positives = 187/391 (47%), Gaps = 32/391 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ +    G   NV T NT+INGLC+      A  LF  M   +      C  +++
Sbjct: 428 QALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWS------CPCDSL 481

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG CK G + +A ++ ++M++    P+V  +NS I G   A    +   + +EM
Sbjct: 482 TYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEM 541

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN V++  ++   CK G + +A  L   M++ G++PN F+ + L+  F   G+V
Sbjct: 542 SAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKV 601

Query: 182 NRAEELFVSM-----------------------ESM-GCKHNVFS--YSILINGYCKNKE 215
           + A  +   +                       ES+ G  H      ++I+I G CK   
Sbjct: 602 DEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGR 661

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A +L+ ++  KG  PD   Y++L  G      ++ AF L DEM    +  +   Y +
Sbjct: 662 VADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNS 721

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I GLCK+  +  AV LF  L+      +   YN LIDG CK G    A++L + + +  
Sbjct: 722 LIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEG 781

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +   V TY I+IH LC  G M++A  L   M
Sbjct: 782 IQPTVFTYTILIHGLCTQGYMEEAIKLLDQM 812



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 188/417 (45%), Gaps = 67/417 (16%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   + ++YNTL++G CR G    A    + M   NG  G      T+TY T+++G C  
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVR-NGFTGT-----TLTYNTLLNGFCSR 388

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A +L+  M    + PN ++ ++L+ GF  A    +A  L+ E + +G+  NVV+ 
Sbjct: 389 GAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTI 448

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LCKN +M EA  L   M +     ++  Y TL+DG+C  G + RA ++ + ME+
Sbjct: 449 NTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMEN 508

Query: 194 MG-----------------------------------CKHNVFSYSILINGYCKNKEIEG 218
           +G                                      N  +Y  LI G+CK   +  
Sbjct: 509 LGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHD 568

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA------ 272
           A  LY EM+ KG+KP++ I + L    +   +V+ A  +  ++    +  D  A      
Sbjct: 569 ACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIG 628

Query: 273 --------------------YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
                               +   I GLCK G + +A  LF  L++  +  D   Y+ LI
Sbjct: 629 KVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLI 688

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            G   SG + +A+ L   +    L  ++VTYN +I+ LC    + +A  LF  +++K
Sbjct: 689 HGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSK 745



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 185/382 (48%), Gaps = 32/382 (8%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N+F YNT+ING C+ G     +   E++   N   GV    +  +Y T++DG C++
Sbjct: 300 GVQVNMFVYNTMINGYCKLGR----MGEVEKLLQANEYRGV--NLDEYSYNTLVDGYCRK 353

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           GF+ KA E    M         +TYN+L++GFC     ++A  L+  M+ +GV PN +S 
Sbjct: 354 GFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISC 413

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + +++   K GK ++A  L +  +  G+  N    NT+++G C   R+  AEELF  M+ 
Sbjct: 414 STLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKE 473

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C  +  +Y  LI+GYCK  ++  A  +  EM + G  P V ++N+   GLF   Q  +
Sbjct: 474 WSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGK 533

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL--RILKYEL-------- 303
              +  EM   G++ +T  Y   I G CK G + +A  L+  +  + LK  L        
Sbjct: 534 VNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVS 593

Query: 304 ------DIRAYNCLIDGL--------CKSGRLKIA--WELFRSLPRGVLIADVVTYNIMI 347
                  +   N ++  L        C +  L I     +  SL  G   +  + +NI+I
Sbjct: 594 CFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVI 653

Query: 348 HALCADGKMDKARDLFLDMEAK 369
             LC  G++  AR+LF D++ K
Sbjct: 654 LGLCKLGRVADARNLFEDLKVK 675



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 188/402 (46%), Gaps = 42/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++   G    + + N L+N L + G    A+ +F++M       G +  P+  
Sbjct: 112 DALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCA----GTL--PDDF 165

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   +    C++G V  A +   +M++  ++ N+V Y++++ G+C       A+ L   +
Sbjct: 166 TVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSL 225

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDE--------------------------------- 148
             +G+ PNVV++ +++   CK G+M+E                                 
Sbjct: 226 QVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGR 285

Query: 149 ---ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
              A+R+ + MI  GV+ N FVYNT+++G+C  GR+   E+L  + E  G   + +SY+ 
Sbjct: 286 MEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNT 345

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           L++GYC+   +  A      M+  G     + YNTL  G      ++ A KL+  M + G
Sbjct: 346 LVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRG 405

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V  +  +  T +DG  K G   +A+ L++         ++   N +I+GLCK+ R+  A 
Sbjct: 406 VVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAE 465

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ELF  +       D +TY  +I   C  G + +A  + ++ME
Sbjct: 466 ELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEME 507



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 6/232 (2%)

Query: 40  NLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 99
           ++ E +A GN +         + +  +I GLCK G V  A+ LF  +K +   P+  TY+
Sbjct: 632 HIIESLAGGNHQSA------KIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYS 685

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           SLIHG   +   + A  L  EM+   + PN+V++N ++  LCK+  +  A  L   +   
Sbjct: 686 SLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSK 745

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G+ PNA  YNTL+DG C  G    A +L   M   G +  VF+Y+ILI+G C    +E A
Sbjct: 746 GISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEA 805

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           + L  +M+   + P+ + Y TL  G      ++   KL++EM   G+    W
Sbjct: 806 IKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMHICGLLPANW 857



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 142/311 (45%), Gaps = 32/311 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  TY  LI G C+ G+   A  L+ EM     E G+  KPN    + ++    +E
Sbjct: 545 GLSPNTVTYGALIAGWCKEGNLHDACILYFEMV----EKGL--KPNLFICSVLVSCFYRE 598

Query: 74  GFVDKAKELFLKMKDE--------------------------NINPNVVTYNSLIHGFCY 107
           G VD+A  +  K+ D                           N     + +N +I G C 
Sbjct: 599 GKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCK 658

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
                +A+ LF ++  +G  P+  +++ +++    +G +D A  L + M+   + PN   
Sbjct: 659 LGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVT 718

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YN+L+ G C +  V+RA  LF  ++S G   N  +Y+ LI+G+CK+     A  L  +M+
Sbjct: 719 YNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI 778

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            +GI+P V  Y  L  GL     +E A KL D+M  + V  +   Y T I G  + G + 
Sbjct: 779 KEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMK 838

Query: 288 EAVELFRTLRI 298
              +L+  + I
Sbjct: 839 AITKLYNEMHI 849



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 36/309 (11%)

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           +  +++ L+     A    +A  +F EM   G +  + S N ++N+L + G +  A  + 
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G  P+ F    +   +C  GRV  A +    ME MG   N+ +Y  +++GYC+ 
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF--------------- 258
            + E A  L   +  KG+ P+VV Y  L  G  +  ++E A K+                
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVA 272

Query: 259 ---------------------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
                                DEM   GV  + + Y T I+G CK G + E  +L +   
Sbjct: 273 YGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANE 332

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LD  +YN L+DG C+ G +  A+E    + R       +TYN +++  C+ G +D
Sbjct: 333 YRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAID 392

Query: 358 KARDLFLDM 366
            A  L+  M
Sbjct: 393 DALKLWFLM 401



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/166 (22%), Positives = 85/166 (51%)

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           S+ +L+  +    +++ AL ++ EM   G +  +   N L   L +   +  A  +F +M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           +  G   D +         C++G +  A +  + +  +  ++++ AY+ ++DG C+ G+ 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ++A +L  SL    L  +VVTY +++   C +G+M++A  +  +++
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIK 261



 Score = 44.3 bits (103), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 28/120 (23%), Positives = 54/120 (45%)

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           Q++ A  +FDEM + G      +    ++ L + G I  AV +F+ +R      D     
Sbjct: 109 QLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVA 168

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +    C+ GR+  A +  + +    L  ++V Y+ ++   C  G+ + AR L   ++ K
Sbjct: 169 IMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVK 228


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 187/367 (50%), Gaps = 22/367 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY+ +I  LC       A  LFEEM       G+V  P+  TYT +ID  CK G +
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKN----GIV--PSVYTYTILIDSFCKAGLI 504

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+  F +M  +N  PNVVTY SLIH +  A    +A  LF  M+ +G +PNVV++  +
Sbjct: 505 QQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTAL 564

Query: 137 MNELCKNGKMDEASRLLELM--------IQIGVR--------PNAFVYNTLMDGFCLTGR 180
           ++  CK G++D+A ++   M        I +  +        PN   Y  L+DG C   R
Sbjct: 565 IDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANR 624

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A EL  +M   GC+ N   Y  LI+G+CK  ++E A  ++ +M  +G  P++  Y++
Sbjct: 625 VEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSS 684

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   LF+  +++   K+  +M  +    +   Y   IDGLCK G   EA  L   +  + 
Sbjct: 685 LINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVG 744

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  Y  +IDG  K G+++   EL+R +       + +TY ++I+  C+ G +D+A 
Sbjct: 745 CYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAH 804

Query: 361 DLFLDME 367
            L  +M+
Sbjct: 805 RLLDEMK 811



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 190/378 (50%), Gaps = 16/378 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  LF  + + G +PNV TY  LI+G C+ G    A  ++  M  G+ E   +      
Sbjct: 541 DANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM-QGDIESSDIDMYFKL 599

Query: 56  ----CK-PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
               C+ PN +TY  ++DGLCK   V++A EL   M      PN + Y++LI GFC    
Sbjct: 600 DDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGK 659

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
              A+ +F++M ++G  PN+ +++ ++N L K  ++D   ++L  M++    PN  +Y  
Sbjct: 660 LENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTD 719

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           ++DG C  G+   A  L + ME +GC  NV +Y+ +I+G+ K  +IE  L LY +M SKG
Sbjct: 720 MIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG 779

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             P+ + Y  L         ++ A +L DEM++        +YR  I+G   N   + ++
Sbjct: 780 CAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSI 837

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR--SLPRGVLIADVVTYNIMIH 348
            L   L   +       Y  LID   K+GRL+ A  L    S    + +A+   Y  +I 
Sbjct: 838 GLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKYLYTSLIE 897

Query: 349 ALCADGKMDKARDLFLDM 366
           +L    K+DKA +L+  M
Sbjct: 898 SLSHASKVDKAFELYASM 915



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 188/410 (45%), Gaps = 63/410 (15%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   YN +++GLC       A+++ + M +      + C PN VTY  ++ G   +G +
Sbjct: 270 PDTVFYNRMVSGLCEASLFQEAMDILDRMRS------ISCIPNVVTYRILLSGCLGKGQL 323

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            + K +   M  E   PN   +NSL+H +C + D++ A  LF +M+  G QP  + +N+ 
Sbjct: 324 GRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIF 383

Query: 137 MNELCKN-----------------------------------------GKMDEASRLLEL 155
           +  +C N                                         GK D+A  ++  
Sbjct: 384 IGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICE 443

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M+  G  P+   Y+ ++   C   +V +A  LF  M+  G   +V++Y+ILI+ +CK   
Sbjct: 444 MMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGL 503

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           I+ A + + EML     P+VV Y +L     +  +V  A KLF+ M   G   +   Y  
Sbjct: 504 IQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTA 563

Query: 276 FIDGLCKNGYIVEAVELFRTLR--------ILKYELD--------IRAYNCLIDGLCKSG 319
            IDG CK G I +A +++  ++         + ++LD        I  Y  L+DGLCK+ 
Sbjct: 564 LIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKAN 623

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R++ A EL  ++       + + Y+ +I   C  GK++ A+++F+ M  +
Sbjct: 624 RVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSER 673



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 195/418 (46%), Gaps = 51/418 (12%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCR----TGHTIVAL--NLFEEMAN--------- 47
           A  LF K+   GC+P    YN  I  +C      G  ++ L    + EM +         
Sbjct: 361 AYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVN 420

Query: 48  ---------GNGEFG----VVCK-------PNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
                    G G+F     ++C+       P+  TY+ +I  LC    V+KA  LF +MK
Sbjct: 421 VSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMK 480

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
              I P+V TY  LI  FC A    +A+  F EM+     PNVV++  +++   K  K+ 
Sbjct: 481 KNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVF 540

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME--------------- 192
           +A++L E+M+  G +PN   Y  L+DG C  G++++A +++  M+               
Sbjct: 541 DANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLD 600

Query: 193 SMGCK-HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              C+  N+ +Y  L++G CK   +E A  L   M   G +P+ ++Y+ L  G  +  ++
Sbjct: 601 DNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKL 660

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A ++F +M   G   + + Y + I+ L K   +   +++   +       ++  Y  +
Sbjct: 661 ENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDM 720

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           IDGLCK G+ + A+ L   +       +V+TY  MI      GK+++  +L+ DM +K
Sbjct: 721 IDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSK 778



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 180/366 (49%), Gaps = 28/366 (7%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK- 72
           GC PN   +N+L++  C++     A  LF++M          C+P  + Y   I  +C  
Sbjct: 337 GCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCG------CQPGYLLYNIFIGSICSN 390

Query: 73  -----EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   ++ A++ + +M D  +  N V  ++     C A  +++A  +  EMM +G  
Sbjct: 391 EELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFV 450

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +++ ++  LC   K+++A  L E M + G+ P+ + Y  L+D FC  G + +A   
Sbjct: 451 PDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNW 510

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           F  M    C  NV +Y+ LI+ Y K +++  A  L+  ML +G KP+VV Y  L  G  +
Sbjct: 511 FDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCK 570

Query: 248 IHQVERAFKLFDEMQRHGVAAD----------------TWAYRTFIDGLCKNGYIVEAVE 291
             Q+++A +++  MQ    ++D                   Y   +DGLCK   + EA E
Sbjct: 571 AGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHE 630

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L  T+ +   E +   Y+ LIDG CK+G+L+ A E+F  +       ++ TY+ +I++L 
Sbjct: 631 LLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLF 690

Query: 352 ADGKMD 357
            + ++D
Sbjct: 691 KEKRLD 696



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 170/401 (42%), Gaps = 50/401 (12%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           +L+ FG + +  TYN LI    R      A  +  EM+N           +  T      
Sbjct: 195 RLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRM------DGCTLGCFAY 248

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK G    A  L  K   E   P+ V YN ++ G C A+ + EA  +   M      P
Sbjct: 249 SLCKAGRCGDALSLLEK---EEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIP 305

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV++ ++++     G++    R+L +M+  G  PN  ++N+L+  +C +   + A +LF
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLF 365

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEG------------------------------ 218
             M   GC+     Y+I I   C N+E+ G                              
Sbjct: 366 KKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA 425

Query: 219 -----------ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                      A  +  EM+SKG  PD   Y+ +   L +  +VE+AF LF+EM+++G+ 
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV 485

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
              + Y   ID  CK G I +A   F  +       ++  Y  LI    K+ ++  A +L
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKL 545

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           F  +       +VVTY  +I   C  G++DKA  ++  M+ 
Sbjct: 546 FEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQG 586



 Score = 87.4 bits (215), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 16/226 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L +K+   GC PNV TY  +I+G  + G     L L+ +M +        C PN +
Sbjct: 732 EAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKG------CAPNFI 785

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+  C  G +D+A  L  +MK      ++ +Y  +I GF    ++  +  L  E+
Sbjct: 786 TYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDEL 843

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP-----NAFVYNTLMDGFC 176
            +    P    + ++++   K G+++ A  LLE   +I   P     N ++Y +L++   
Sbjct: 844 SENESVPVESLYRILIDNFIKAGRLEGALNLLE---EISSSPSLAVANKYLYTSLIESLS 900

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
              +V++A EL+ SM +      + ++  LI G  +  + + AL L
Sbjct: 901 HASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 175/346 (50%), Gaps = 7/346 (2%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F K+   G +PN+  + +LI+GLC+ G    A  + EEM   NG      KPN  T+T +
Sbjct: 298 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG-----WKPNVYTHTAL 351

Query: 67  IDGLCKEGFVDKAKELFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           IDGLCK G+ +KA  LFLK+   +I  PNV TY S+I G+C  +  N A+ LF  M +QG
Sbjct: 352 IDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 411

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PNV ++  ++N  CK G  D A  L+ LM   G RPN + YN ++D  C   R   A 
Sbjct: 412 LFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAY 471

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           EL     S G + +  +Y+ILI   CK  +I+ AL+ +  M   G + D+ + N L    
Sbjct: 472 ELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAF 531

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +++ + +LF  +   G+      Y + I G CK G    A++ F  ++      D 
Sbjct: 532 CRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDS 591

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
             Y  LI GLCK   +  A +L+ ++    L    VT   + +  C
Sbjct: 592 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 637



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 182/366 (49%), Gaps = 7/366 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++ V G  P+  ++  ++ G  R G    A    +   +G  + G +  P+  T
Sbjct: 224 AENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEA----DRWLSGMIQRGFI--PDNAT 277

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            T I+  LC+ G V++A   F KM D    PN++ + SLI G C      +A  +  EM+
Sbjct: 278 CTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMV 337

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV-RPNAFVYNTLMDGFCLTGRV 181
             G +PNV +   +++ LCK G  ++A RL   +++  + +PN   Y +++ G+C   ++
Sbjct: 338 RNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKL 397

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           NRAE LF  M+  G   NV +Y+ LING+CK    + A  L + M  +G +P++  YN +
Sbjct: 398 NRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAV 457

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +   A++L ++    G+ AD   Y   I   CK   I +A+  F  +    +
Sbjct: 458 IDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGF 517

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E D+R  N LI   C+  ++K +  LF+ +    L+    TY  MI   C +G  D A  
Sbjct: 518 EADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALK 577

Query: 362 LFLDME 367
            F +M+
Sbjct: 578 YFHNMK 583



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 172/357 (48%), Gaps = 11/357 (3%)

Query: 21  TYNTLI-NGLCRTGHTIVA--LNLFEEMANGNGEFGVV-------CKPNTVTYTTIIDGL 70
           T ++LI NG  +  H ++   L  F E+   N   G+V         P+++T   +++  
Sbjct: 156 TADSLIANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIA 215

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            + G +D A+ +F +M    + P+  ++  ++ G        EA      M+ +G  P+ 
Sbjct: 216 IESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDN 275

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            +  +I++ LC+NG ++ A      MI +G +PN   + +L+DG C  G + +A E+   
Sbjct: 276 ATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEE 335

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIYNTLFIGLFEIH 249
           M   G K NV++++ LI+G CK    E A  L+ +++   I KP+V  Y ++  G  +  
Sbjct: 336 MVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKED 395

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           ++ RA  LF  M+  G+  +   Y T I+G CK G    A EL   +    +  +I  YN
Sbjct: 396 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYN 455

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +ID LCK  R   A+EL        L AD VTY I+I   C    + +A   F  M
Sbjct: 456 AVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRM 512



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 146/301 (48%), Gaps = 16/301 (5%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y    D L   G + KA E+                  ++  F      NEA  + ++M 
Sbjct: 153 YLVTADSLIANGNLQKAHEVM---------------RCMLRNFSEIGRLNEAVGMVMDMQ 197

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +QG+ P+ ++ N ++    ++G +D A  + + M   GV P++  +  ++ G    G++ 
Sbjct: 198 NQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQ 257

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+     M   G   +  + +++++  C+N  +  A+  + +M+  G KP+++ + +L 
Sbjct: 258 EADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 317

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKY 301
            GL +   +++AF++ +EM R+G   + + +   IDGLCK G+  +A  LF + +R   Y
Sbjct: 318 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIY 377

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  Y  +I G CK  +L  A  LF  +    L  +V TY  +I+  C  G  D+A +
Sbjct: 378 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYE 437

Query: 362 L 362
           L
Sbjct: 438 L 438



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 58/232 (25%), Positives = 109/232 (46%), Gaps = 15/232 (6%)

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           V  + L  NG + +A  ++  M++                F   GR+N A  + + M++ 
Sbjct: 155 VTADSLIANGNLQKAHEVMRCMLR---------------NFSEIGRLNEAVGMVMDMQNQ 199

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +  + + ++    ++  I+ A +++ EM  +G+ PD   +  + IG F   +++ A
Sbjct: 200 GLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEA 259

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +    M + G   D       +  LC+NG +  A+  FR +  L ++ ++  +  LIDG
Sbjct: 260 DRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 319

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LCK G +K A+E+   + R     +V T+  +I  LC  G  +KA  LFL +
Sbjct: 320 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKL 371



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 8/154 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A F ++   G E ++   N LI   CR      +  LF+ + +     G+V  P   
Sbjct: 504 QALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVS----LGLV--PTKE 557

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I G CKEG  D A + F  MK     P+  TY SLI G C  +  +EA  L+  M
Sbjct: 558 TYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 617

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           +D+G+ P  V+   +  E CK  + D AS ++ L
Sbjct: 618 IDRGLSPPEVTRVTLAYEYCK--RNDSASAMIVL 649



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 9/157 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  LF  +   G  P   TY ++I+G C+ G   +AL  F  M          C P++ 
Sbjct: 539 ESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHG------CVPDSF 592

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++I GLCK+  VD+A +L+  M D  ++P  VT  +L + +C  ND + +  + +E 
Sbjct: 593 TYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND-SASAMIVLEP 651

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           +D+ +    V    ++ +LC   K+  A+   + +++
Sbjct: 652 LDKKLWIRTV--RTLVRKLCSEKKVGVAALFFQKLLE 686



 Score = 44.7 bits (104), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 11/153 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F  ++  GC P+ FTY +LI+GLC+      A  L+E M +          P  VT
Sbjct: 575 ALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRG------LSPPEVT 628

Query: 63  YTTIIDGLCKEGFVDKAKELF-LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T+    CK    D A  +  L+  D+ +   + T  +L+   C       A   F ++
Sbjct: 629 RVTLAYEYCKRN--DSASAMIVLEPLDKKL--WIRTVRTLVRKLCSEKKVGVAALFFQKL 684

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           +++    + V+         ++GK +  + L E
Sbjct: 685 LEKDSSADRVTLAAFTTACSESGKNNLVADLTE 717


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 181/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  GC PN  TYN L+NGL + G    A  L EEM N           +  
Sbjct: 233 QALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSG------LNVSAY 286

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+G C++G   +A +L  +M +    P + TYN+L++G C        +  F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     P++VSFN ++   C+ G + EA  L + +    + P    YNTL+ G C+ G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M   G   ++F+Y+IL+NG  K   +  A   ++EMLSKG+KPD   YNT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            +G  +I     AF + +EM   G   D   Y  F+  LC+ G   EA +L   +     
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y  +I+G  K+G L+ A E+F  +    +   VVTY ++IHA  A   +D A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 362 LFLDMEAK 369
            F  M  K
Sbjct: 587 YFSKMLEK 594



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 183/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G   + +TYN LING C+ G  + A +L EEM N          P   
Sbjct: 268 QAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRA------FPTLS 321

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ GLCK   V   +  F  M      P++V++NSL++G+C     +EA  LF E+
Sbjct: 322 TYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDEL 381

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P V+++N +++ LC  G +D A RL + M   G+ P+ F Y  L++G    G V
Sbjct: 382 KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYV 441

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   F  M S G K + F+Y+  I G  K  +   A S+  EML+ G  PDV+ YN  
Sbjct: 442 SMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVF 501

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +    E A  L + M   G+  D   Y + I+G  KNG++ +A E+F  +     
Sbjct: 502 VHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGV 561

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  Y  LI        L +A+  F  +    + A+V+TYN +I+ LC   +MD+A  
Sbjct: 562 APSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYK 621

Query: 362 LFLDMEAK 369
            F +ME K
Sbjct: 622 YFDEMEEK 629



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/314 (32%), Positives = 173/314 (55%), Gaps = 6/314 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +L+     P V TYNTLI+GLC  G+   AL L +EM +  G F     P+  
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD-QGLF-----PDIF 426

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++G  K G+V  A+  F +M  + + P+   YN+ I G     D + A  +  EM
Sbjct: 427 TYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEM 486

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+V+++NV ++ LC+ G  +EA  LLE M+  G+ P+   Y ++++GF   G +
Sbjct: 487 LAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHL 546

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E+F  M S G   +V +Y++LI+ +   + ++ A   +S+ML K +  +V+ YN +
Sbjct: 547 RKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAI 606

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +++ A+K FDEM+  G+  + ++Y   I+  C  GY  EA+ L+R +   K 
Sbjct: 607 INGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKI 666

Query: 302 ELDIRAYNCLIDGL 315
           + D   ++  +  L
Sbjct: 667 QPDSFTHSVFLKNL 680



 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 165/330 (50%), Gaps = 5/330 (1%)

Query: 40  NLFEEMANGNG---EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           NL  +  N  G   +FG+  KP  VTY T++D  CKEG VD+A EL  +M++    PN V
Sbjct: 194 NLLSKAKNVYGMMEQFGI--KPTVVTYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDV 251

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           TYN L++G     +  +AK L  EM++ G+  +  ++N ++N  C+ G   EA  L+E M
Sbjct: 252 TYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +     P    YNTLM G C   +V      F  M       ++ S++ L+ GYC+   I
Sbjct: 312 VNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCI 371

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             A  L+ E+  + + P V+ YNTL  GL     ++ A +L  EM   G+  D + Y   
Sbjct: 372 SEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTIL 431

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           ++G  K GY+  A   F  +     + D  AYN  I G  K     +A+ +   +     
Sbjct: 432 VNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGF 491

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
             DV+TYN+ +HALC  G  ++A DL  +M
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENM 521



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 129/250 (51%), Gaps = 6/250 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F ++   G +P+ F YNT I G  +   T VA ++ EEM            P+ +T
Sbjct: 444 ARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAG------FPPDVIT 497

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y   +  LC++G  ++A +L   M  + + P+ VTY S+I+GF       +A+ +F EM+
Sbjct: 498 YNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEML 557

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +GV P+VV++ V+++       +D A      M++  V  N   YN +++G C+T R++
Sbjct: 558 SKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMD 617

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A + F  ME  G   N FSY+ILIN  C     E AL LY EML + I+PD   ++   
Sbjct: 618 EAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFL 677

Query: 243 IGLFEIHQVE 252
             L   +QV 
Sbjct: 678 KNLHRDYQVH 687



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 143/288 (49%)

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +F KM    + P+V   N ++      N  ++AK ++  M   G++P VV++N +++  C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G++D+A  LL  M + G  PN   YN L++G    G + +A+ L   M + G   + +
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LING+C+      A  L  EM+++   P +  YNTL  GL +  QV      F +M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            +     D  ++ + + G C+ G I EA  LF  L+       +  YN LI GLC  G L
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             A  L + +    L  D+ TY I+++     G +  AR  F +M +K
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSK 454



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 15/215 (6%)

Query: 155 LMIQIGVRPNAFVYNTLMD---GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +M Q   + + FV+  ++D   G  L        E  VS E  G         +LI G+ 
Sbjct: 109 VMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGV------VDVLIAGHV 162

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
                   L ++ +M+  G+ PDV   N +   L + + + +A  ++  M++ G+     
Sbjct: 163 X------CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVV 216

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y T +D  CK G + +A+EL   ++      +   YN L++GL K G L+ A  L   +
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               L     TYN +I+  C  G   +A DL  +M
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEM 311


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  195 bits (496), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 199/385 (51%), Gaps = 39/385 (10%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
            A++  +R  G EPNVFTYN L+  LC+ G    A  L  EM+         C P+ V+Y
Sbjct: 165 GAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRG------CVPDGVSY 218

Query: 64  TTIIDGLCKEGFVDKAKE--------------------------------LFLKMKDENI 91
           TT++  +C++G V++A+E                                L  +M    +
Sbjct: 219 TTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGV 278

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +PNVV+Y+S+I       +   A  +  +M+ +G +PNV +F+ +M      G++ E   
Sbjct: 279 DPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVG 338

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES-MGCKHNVFSYSILINGY 210
           L  +M+  GVRPN  VYNTL++G C +G +  A ++   ME    C+ NV +YS L++G+
Sbjct: 339 LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGF 398

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K  +++GA  ++++M++ G++P+VV+Y ++   L +    ++A++L D M   G     
Sbjct: 399 VKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTV 458

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             + TFI GLC  G ++ A+ +   ++      D R YN L+DGL     LK A EL R 
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE 518

Query: 331 LPRGVLIADVVTYNIMIHALCADGK 355
           L    +  ++VTYN +++   + GK
Sbjct: 519 LEERKVELNLVTYNTVMYGFSSHGK 543



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 181/357 (50%), Gaps = 10/357 (2%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R FG E  V   N LI GLCR G       L +EM  GNG       PN V+Y+++I  L
Sbjct: 239 RRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMV-GNG-----VDPNVVSYSSVISWL 292

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
              G V+ A  +  KM      PNV T++SL+ G+       E   L+  M+ +GV+PNV
Sbjct: 293 SDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNV 352

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           V +N ++N LC +G + EA  +   M +    RPN   Y+TL+ GF   G +  A E++ 
Sbjct: 353 VVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWN 412

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M + G + NV  Y+ +++  CKN   + A  L   M + G  P VV +NT   GL    
Sbjct: 413 KMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGG 472

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V  A ++ D+MQR+G   DT  Y   +DGL     + EA EL R L   K EL++  YN
Sbjct: 473 RVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYN 532

Query: 310 CLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
            ++ G    G+ +   ++  R L  GV   D +T N++I+A    GK+  A   FLD
Sbjct: 533 TVMYGFSSHGKEEWVLQVLGRMLVNGVK-PDAITVNVVIYAYSKLGKVRTAIQ-FLD 587



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 156/317 (49%), Gaps = 6/317 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L+  + + G  PNV  YNTL+NGLC +G+   A+++   M     E    C+PN  
Sbjct: 335 EGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM-----EKDCFCRPNVT 389

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T++ G  K G +  A E++ KM +  + PNVV Y S++   C  + +++A  L   M
Sbjct: 390 TYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNM 449

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P VV+FN  +  LC  G++  A R+++ M + G  P+   YN L+DG      +
Sbjct: 450 ATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNEL 509

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   +E    + N+ +Y+ ++ G+  + + E  L +   ML  G+KPD +  N +
Sbjct: 510 KEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVV 569

Query: 242 FIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                ++ +V  A +  D +     +  D  A+ + + G+C +  I EA+     +    
Sbjct: 570 IYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKG 629

Query: 301 YELDIRAYNCLIDGLCK 317
              +I  ++ L+ G  K
Sbjct: 630 IFPNIATWDVLVRGFFK 646



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 172/362 (47%), Gaps = 14/362 (3%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           MK+    C  + F    ++N    +G    AL +F  +     EFG  CKP    Y  ++
Sbjct: 99  MKIERIPCSQDSFI--CVLNSYKNSGLGDRALKMFYRIK----EFG--CKPTVKIYNHLL 150

Query: 68  DGLCKEGF--VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           D L  E          ++  M+ E + PNV TYN L+   C     + A  L +EM  +G
Sbjct: 151 DALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRG 210

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+ VS+  ++  +C++G+++EA    E+  + G      V N L+ G C  GRV    
Sbjct: 211 CVPDGVSYTTVVAAMCEDGRVEEAR---EVARRFGAEGVVSVCNALICGLCREGRVGEVF 267

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M   G   NV SYS +I+      E+E AL++  +M+ +G +P+V  +++L  G 
Sbjct: 268 GLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGY 327

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKYELD 304
           F   +V     L+  M   GV  +   Y T ++GLC +G + EAV++  R  +      +
Sbjct: 328 FLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPN 387

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+ L+ G  K+G L+ A E++  +    +  +VV Y  M+  LC +   D+A  L  
Sbjct: 388 VTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLID 447

Query: 365 DM 366
           +M
Sbjct: 448 NM 449



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 168/378 (44%), Gaps = 46/378 (12%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK-------------- 72
           + L R  + + AL  F+ + N      +  K   +TY  +I+ L +              
Sbjct: 45  HALRREPNVLYALQHFQYLTNT-----LAFKHTPLTYHVMIEKLGRNSELDALHYILHQM 99

Query: 73  ---------------------EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--YAN 109
                                 G  D+A ++F ++K+    P V  YN L+        N
Sbjct: 100 KIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGN 159

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
            ++    ++  M  +G++PNV ++NV++  LCKNGK+D A +LL  M + G  P+   Y 
Sbjct: 160 KFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYT 219

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           T++   C  GRV  A E+       G +  V   + LI G C+   +     L  EM+  
Sbjct: 220 TVVAAMCEDGRVEEAREV---ARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGN 276

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G+ P+VV Y+++   L ++ +VE A  +  +M R G   +   + + + G    G + E 
Sbjct: 277 GVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEG 336

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI-ADVVTYNIMIH 348
           V L+R + +     ++  YN L++GLC SG L  A ++   + +      +V TY+ ++H
Sbjct: 337 VGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVH 396

Query: 349 ALCADGKMDKARDLFLDM 366
                G +  A +++  M
Sbjct: 397 GFVKAGDLQGASEVWNKM 414


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 186/365 (50%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +R  GC PN  TYN L++G+C  G    AL L   + +        CKP+TV
Sbjct: 60  QAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHG------CKPSTV 113

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ GLC       A EL  +M  EN  PN  T+N +I+  C      +A  L  +M
Sbjct: 114 NYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 173

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   N+V++N I+N LC+   +D A  LL  M   G +P+   YNTL+ G C   R 
Sbjct: 174 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARW 233

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AEEL  +M   GC  +  +++ LI   C+   +  A+ ++ +M  KG  P+ + Y+T+
Sbjct: 234 VDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTI 293

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++++A +LF+EM   G   D   Y+   + L  +  I EA++  R L+    
Sbjct: 294 ISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQDSGI 352

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 YN ++ GLC++G+ + A ++   +     + D +TY I+I  L  +G +++AR+
Sbjct: 353 SPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARE 412

Query: 362 LFLDM 366
           L + +
Sbjct: 413 LLIKL 417



 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 109/344 (31%), Positives = 178/344 (51%), Gaps = 7/344 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PN +TYN LI+ LC  G    AL++ ++M          C P+ VTY  +++  CK   
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDM------LCRGCAPDVVTYNILLEATCKGRG 57

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             +A EL   M+ E   PN VTYN L+ G C   D ++A  L   +   G +P+ V++N 
Sbjct: 58  YRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNT 117

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC   +  +A  L+  M++    PN   +N ++   C  G + +A +L   M   G
Sbjct: 118 VLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHG 177

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C  N+ +Y+ +ING C+ + ++GA+ L S+M S G KPD+V YNTL  GL    +   A 
Sbjct: 178 CTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAE 237

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L D M ++G   D   + T I  LC+ G +V+A+E+F+ +       +   Y+ +I GL
Sbjct: 238 ELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGL 297

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            K+ +L  A ELF  +       D + Y ++   L  D  +++A
Sbjct: 298 AKATKLDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEA 340



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 154/313 (49%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +PN  TY  +I  LC+ G V  A  +   M      P+VVTYN L+   C    + +A  
Sbjct: 4   QPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAME 63

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   M  +G  PN V++NV+M+ +C  G +D+A  LL  +   G +P+   YNT++ G C
Sbjct: 64  LIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R   A+EL   M    C  N  +++++I   C+   ++ A+ L  +M   G   ++V
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +  GL E   V+ A  L  +M+ +G   D   Y T + GLC     V+A EL   +
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D   +N LI  LC+ G +  A E+F+ +P      + +TY+ +I  L    K+
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 357 DKARDLFLDMEAK 369
           D+A +LF +M  K
Sbjct: 304 DQALELFNEMGHK 316



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 144/279 (51%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + PN  TYN LIH  C      +A  +  +M+ +G  P+VV++N+++   CK     +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L++LM   G  PN   YN LMDG C  G V+ A EL  ++ S GCK +  +Y+ ++ G 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C  +    A  L +EML +   P+   +N +   L     +++A +L ++M +HG  A+ 
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I+GLC+   +  A+ L   ++    + DI  YN L+ GLC + R   A EL  +
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +   + D VT+N +I  LC  G M  A ++F  M  K
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDK 281



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 125/235 (53%), Gaps = 11/235 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  K++ +GC+P++ TYNTL+ GLC     + A  L + M   NG     C P+ VT
Sbjct: 201 AMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQ-NG-----CLPDNVT 254

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+I  LC++G +  A E+F +M D+   PN +TY+++I G   A   ++A  LF EM 
Sbjct: 255 FNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG 314

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  P+ + + ++   L  +  ++EA + +  +   G+ P+  +YN ++ G C  G+  
Sbjct: 315 HKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTE 373

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            A ++   M S GC  +  +Y ILI G       EG L+   E+L K    DV++
Sbjct: 374 FAIDIMAYMVSSGCMPDDLTYVILIEGL----AYEGYLNEARELLIKLCSRDVLV 424



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 87/174 (50%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           M  + N ++Y+ LI+  C+  ++  ALS+  +ML +G  PDVV YN L     +     +
Sbjct: 1   MPVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQ 60

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +L D M+  G   +   Y   +DG+C  G + +A+EL R L     +     YN ++ 
Sbjct: 61  AMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 120

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GLC + R   A EL   + R     +  T+N++I++LC  G + +A  L   M 
Sbjct: 121 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 174


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 163/311 (52%), Gaps = 1/311 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C+PN VTY  IID +C+EG VD+A+EL   +      PN V YN+++ G C    W +A+
Sbjct: 12  CEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAE 71

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  EM+ +   PN  + NVI+N L + G + + +R LE M + G   N   YN ++ G 
Sbjct: 72  ELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGM 131

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G V+ A EL  +M+S GCK ++ +Y+ L+ G C   + E A  L  +M      PD 
Sbjct: 132 CEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDN 191

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V +NT+   L +   + +AF++F +M   G   ++  Y T I GL K G + +A+EL   
Sbjct: 192 VTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNE 251

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +    Y  D + Y  L + L K  +++   ++   L    +    V +N ++  LC +GK
Sbjct: 252 MASKGYNTD-KMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGK 310

Query: 356 MDKARDLFLDM 366
            D A D+  DM
Sbjct: 311 TDYAIDVLADM 321



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 177/354 (50%), Gaps = 9/354 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GCEPNV TYN +I+ +CR G    A  L   + +        CKPNTV Y T++ G
Sbjct: 7   MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRG------CKPNTVNYNTVLKG 60

Query: 70  LCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           LC  E +VD A+EL  +M  EN  PN  T N +++         +      +M   G   
Sbjct: 61  LCSIERWVD-AEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTA 119

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV++N +++ +C+ G +D A  LL  M   G +P+   YNTL+ G C   +   AEEL 
Sbjct: 120 NVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELM 179

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
           + M    C  +  +++ +I+  C+   I  A  ++ +M  KG  P+   Y+T+  GL + 
Sbjct: 180 IKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKA 239

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++E+A +L +EM   G   D   Y+   + L K   I E V++   L+          +
Sbjct: 240 GKMEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLF 298

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           N ++  LC++G+   A ++   +     + D +TY I+I  L  +G + +AR+L
Sbjct: 299 NTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEAREL 352



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/336 (31%), Positives = 161/336 (47%), Gaps = 8/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   L   GC+PN   YNT++ GLC     + A  L +EM   N      C PN  
Sbjct: 34  QARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEMVREN------CPPNEA 87

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   I++ L ++G + K      KM       NVVTYN++I G C     + A  L   M
Sbjct: 88  TVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNM 147

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++V++N ++  LC   + ++A  L+  M Q    P+   +NT++   C  G +
Sbjct: 148 QSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLI 207

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E+F  M   GC  N  +YS +I G  K  ++E AL L +EM SKG   D  +Y  L
Sbjct: 208 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTD-KMYQLL 266

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  ++E   ++  ++Q  G++  T  + T +  LC+NG    A+++   +     
Sbjct: 267 TESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGC 326

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVL 336
             D   Y  LI+GL   G L+ A EL   L  R VL
Sbjct: 327 MPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVL 362



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 123/249 (49%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G +PNVV++NVI++ +C+ G +D+A  LL  +   G +PN   YNT++ G C   R
Sbjct: 7   MRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIER 66

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              AEEL   M    C  N  + ++++N   +   ++       +M   G   +VV YN 
Sbjct: 67  WVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNA 126

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G+ E   V+ A +L   MQ  G   D   Y T + GLC      +A EL   +    
Sbjct: 127 VISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND 186

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   +N +I  LC+ G +  A+E+F+ +P      +  TY+ +I  L   GKM++A 
Sbjct: 187 CLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQAL 246

Query: 361 DLFLDMEAK 369
           +L  +M +K
Sbjct: 247 ELLNEMASK 255



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 111/219 (50%)

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L++LM   G  PN   YN ++D  C  G V++A EL  S+ S GCK N  +Y+ ++ G 
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C  +    A  L  EM+ +   P+    N +   L     +++  +  ++M +HG  A+ 
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I G+C+ G++  A+EL   ++    + DI  YN L+ GLC + + + A EL   
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +   + D VT+N +I  LC  G + +A ++F  M  K
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEK 220



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 130/275 (47%), Gaps = 40/275 (14%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   GC  NV TYN +I+G+C  GH   AL L   M +    FG  CKP+ VTY T++ 
Sbjct: 111 KMSKHGCTANVVTYNAVISGMCEQGHVDSALELLSNMQS----FG--CKPDIVTYNTLLK 164

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC     + A+EL +KM   +  P+ VT+N++I   C      +A  +F +M ++G  P
Sbjct: 165 GLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNP 224

Query: 129 NVVSFNVIMNELCKNGKMDEASRLL---------------------------ELMIQI-- 159
           N  +++ I+  L K GKM++A  LL                           E ++Q+  
Sbjct: 225 NSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKMYQLLTESLNKEDKIEEVVQVVH 284

Query: 160 -----GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
                G+ P   ++NT++   C  G+ + A ++   M S GC  +  +Y ILI G     
Sbjct: 285 KLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEG 344

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            ++ A  L S + S+ +  + +I N   +    IH
Sbjct: 345 YLQEARELVSRLCSRDVLSNSLIKNEALLLDQNIH 379



 Score =  113 bits (282), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 109/240 (45%), Gaps = 44/240 (18%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   ++ FGC+P++ TYNTL+ GLC       A  L  +M+  +      C P+ VT
Sbjct: 140 ALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQND------CLPDNVT 193

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM- 121
           + TII  LC++G + +A E+F +M ++  NPN  TY+++I G   A    +A  L  EM 
Sbjct: 194 FNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMA 253

Query: 122 ---------------------------------MDQGVQPNVVSFNVIMNELCKNGKMDE 148
                                             D G+ P  V FN ++  LC+NGK D 
Sbjct: 254 SKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDY 313

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A  +L  M+  G  P+   Y  L++G    G +  A EL   +    C  +V S S++ N
Sbjct: 314 AIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL----CSRDVLSNSLIKN 369



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 82/169 (48%), Gaps = 7/169 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  +F ++   GC PN  TY+T+I GL + G    AL L  EMA+       +     
Sbjct: 208 LQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKM----- 262

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  + + L KE  +++  ++  K++D  I+P  V +N+++   C     + A  +  +
Sbjct: 263 --YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLAD 320

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
           M+  G  P+ +++ +++  L   G + EA  L+  +    V  N+ + N
Sbjct: 321 MVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSRDVLSNSLIKN 369



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 71/149 (47%)

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L   M ++G +P+VV YN +   +     V++A +L + +   G   +T  Y T + G
Sbjct: 1   MELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKG 60

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           LC     V+A EL   +       +    N +++ L + G L+        + +    A+
Sbjct: 61  LCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTAN 120

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEA 368
           VVTYN +I  +C  G +D A +L  +M++
Sbjct: 121 VVTYNAVISGMCEQGHVDSALELLSNMQS 149


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 189/368 (51%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   G  P+V ++N LI G CR G    AL  ++EM       G    P+ V
Sbjct: 247 KAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMR------GRRVTPDVV 300

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +++ +I    + G +D A E   +M++  + P+ V Y  +I GFC A    EA  +  EM
Sbjct: 301 SFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEM 360

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P+VV++N ++N LCK  ++ +A  LL  M + GV P+   + TL+ G+C  G +
Sbjct: 361 VAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNI 420

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A + F ++     + ++ +Y+ LI+G C+  ++  A  L+ +M S+ I P+ V Y+ L
Sbjct: 421 EKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E  QV+ AF   DEM   G+  +   Y + I G C++G + +  +    +R  K 
Sbjct: 481 IDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  YN LI G  K G++  A+ L + +    +  D VTYN++I      G M +A  
Sbjct: 541 MPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADW 600

Query: 362 LFLDMEAK 369
           ++  M A+
Sbjct: 601 VYKKMGAR 608



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A AL   +   G +P + TYN+++ GL R G    A  +F  M       GV   P+  +
Sbjct: 213 AMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAM----DACGVA--PDVRS 266

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I G C+ G +++A   + +M+   + P+VV+++ LI  F    + + A     EM 
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMR 326

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ P+ V + +++   C+ G M EA R+ + M+  G  P+   YNTL++G C   R++
Sbjct: 327 EFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLS 386

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEEL   M+  G   ++ +++ LI+GYC++  IE AL  +  +  + ++PD+V YNTL 
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLI 446

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+     + +A +L+D+M    +  +   Y   ID  C+ G +  A      +      
Sbjct: 447 DGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIV 506

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +I  YN +I G C+SG +    +    +    ++ D++TYN +IH    +GKM +A +L
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566

Query: 363 FLDME 367
              ME
Sbjct: 567 LKIME 571



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 181/345 (52%), Gaps = 8/345 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK-PNTVTYTTIIDGLCKEG 74
           E N +T N +++  C+T         F E+     E    C  P+ VT+  ++D   + G
Sbjct: 156 EVNTYTLNIMVHSYCKTLQ-------FGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAG 208

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            V+ A  L   M  + I P +VTYNS++ G      W++A+ +F  M   GV P+V SFN
Sbjct: 209 DVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFN 268

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++   C+ G+++EA R  + M    V P+   ++ L+  F   G ++ A E    M   
Sbjct: 269 MLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREF 328

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +   Y+++I G+C+   +  AL +  EM++ G  PDVV YNTL  GL +  ++  A
Sbjct: 329 GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDA 388

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L +EM+  GV  D   + T I G C++G I +A++ F T+   +   DI  YN LIDG
Sbjct: 389 EELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDG 448

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +C+ G L  A EL+  +    +  + VTY+I+I + C  G++D A
Sbjct: 449 MCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNA 493



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 164/280 (58%), Gaps = 8/280 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++  FGC P+V TYNTL+NGLC+       L+  EE+ N   E GV   P+ 
Sbjct: 351 LEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERR----LSDAEELLNEMKERGV--PPDL 404

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+TT+I G C++G ++KA + F  + D+ + P++VTYN+LI G C   D  +A  L+ +
Sbjct: 405 CTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDD 464

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + + PN V+++++++  C+ G++D A   L+ M+  G+ PN   YN+++ G+C +G 
Sbjct: 465 MHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGN 524

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V++ ++    M       ++ +Y+ LI+GY K  ++  A +L   M ++ ++PD V YN 
Sbjct: 525 VSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNM 584

Query: 241 LFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           +  G F +H  ++ A  ++ +M   G+  D + Y + I+G
Sbjct: 585 IISG-FSVHGNMQEADWVYKKMGARGIEPDRYTYMSMING 623



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 90/311 (28%), Positives = 152/311 (48%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           NT T   ++   CK     +   +  +M+   + P+VVT+N ++     A D   A  L 
Sbjct: 158 NTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALI 217

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M+ +G++P +V++N ++  L +NG+ D+A  +   M   GV P+   +N L+ GFC  
Sbjct: 218 DSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRA 277

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A   +  M       +V S+S LI  + +  E++ A     EM   G+ PD VIY
Sbjct: 278 GELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIY 337

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             +  G      +  A ++ DEM   G   D   Y T ++GLCK   + +A EL   ++ 
Sbjct: 338 TMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKE 397

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                D+  +  LI G C+ G ++ A + F ++    L  D+VTYN +I  +C  G + K
Sbjct: 398 RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGK 457

Query: 359 ARDLFLDMEAK 369
           A +L+ DM ++
Sbjct: 458 ANELWDDMHSR 468



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 151/268 (56%), Gaps = 6/268 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  G  P++ T+ TLI+G CR G+   AL  F+ +++         +P+ V
Sbjct: 387 DAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQR------LRPDIV 440

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG+C++G + KA EL+  M    I PN VTY+ LI   C     + A     EM
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ PN++++N I+   C++G + +  + L  M    V P+   YNTL+ G+   G++
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   ME+   + +  +Y+++I+G+  +  ++ A  +Y +M ++GI+PD   Y ++
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSM 620

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             G       +++F+L DEM + G+A D
Sbjct: 621 INGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/313 (22%), Positives = 140/313 (44%), Gaps = 35/313 (11%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P    ++ LI  +  +    EA   F  ++D  V     + N ++  L + G     + 
Sbjct: 86  TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTAD 145

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
              L++      N +  N ++  +C T +    + +   ME      +V +++++++   
Sbjct: 146 AYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARF 205

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           +  ++E A++L   M+SKGIKP +V YN++  GL    + ++A ++F  M   GVA D  
Sbjct: 206 RAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVR 265

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS- 330
           ++   I G C+ G + EA+  ++ +R  +   D+ +++CLI    + G +  A E  R  
Sbjct: 266 SFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREM 325

Query: 331 -----LPRGVL-----------------------------IADVVTYNIMIHALCADGKM 356
                +P GV+                             + DVVTYN +++ LC + ++
Sbjct: 326 REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRL 385

Query: 357 DKARDLFLDMEAK 369
             A +L  +M+ +
Sbjct: 386 SDAEELLNEMKER 398



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 30/150 (20%), Positives = 62/150 (41%)

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           L + S +L+    P   +++ L     +  +   AF+ F  +  H V     A    +  
Sbjct: 74  LDIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAA 133

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           L + G+     + +R +     E++    N ++   CK+ +      +   + +  +  D
Sbjct: 134 LSRAGWPHLTADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPD 193

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VVT+N+M+ A    G ++ A  L   M +K
Sbjct: 194 VVTHNVMVDARFRAGDVEAAMALIDSMVSK 223


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 195/406 (48%), Gaps = 51/406 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +R  G  P  ++Y+ LI+GLC+ G    AL+L EEM   N       KP+ V
Sbjct: 341 EAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN------VKPSLV 394

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++ DGLCK G  + +  +F  +  E    +V++YN+LI+GF    D   A  L  EM
Sbjct: 395 TYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEM 454

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR------------------- 162
              G  PN  +FN +++  CK  ++D+A  +  +M+++GV+                   
Sbjct: 455 RMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHF 514

Query: 163 ----------------PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS---- 202
                           PN++ YN ++   C   +  +A E+   M     K+NVF     
Sbjct: 515 WEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVM----LKNNVFPCAIH 570

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE-IHQVERAFKLFDEM 261
           Y+ LI+GY K      AL LY++ML  GI P +V Y T+ I +F    +++ A+ LF EM
Sbjct: 571 YNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTY-TMLINMFSNRSKMQEAYYLFKEM 629

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            + G+  D   +   I G CK G +  A  L+  +       ++  Y CLIDG  K  R+
Sbjct: 630 IKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRM 689

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             A  LF  + R  +  D +TY  +I    + G  D+ R++F +M+
Sbjct: 690 DKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMK 735



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 190/368 (51%), Gaps = 11/368 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++AA +F++ R FG E N+ + N L+N       T    +LFEE+ +          PN 
Sbjct: 195 VDAADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPS------PNV 248

Query: 61  VTYTTIIDGLCKEGF-----VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
            TYT +++  CK  F     + KA E+  +M+    +P VVTY + IHG C A     A 
Sbjct: 249 FTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFAL 308

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            L  ++  +    N   +N +++E C+NG++ EA  LLE M   G+ P A+ Y+ L+DG 
Sbjct: 309 RLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGL 368

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G+V +A +L   M     K ++ +YS L +G CK+   E +LS++  + ++G K DV
Sbjct: 369 CKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDV 428

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           + YNTL  G      +  A KL  EM+ +G   +++ +   I G CK   + +A+E+F  
Sbjct: 429 ISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTI 488

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +  +L+I   N + D   + G    A +L   +    ++ +  TYNI+I  LC + K
Sbjct: 489 MLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQK 548

Query: 356 MDKARDLF 363
            +KA ++ 
Sbjct: 549 TEKAWEVL 556



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 185/367 (50%), Gaps = 11/367 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTG-----HTIVALNLFEEMANGNGEFGVVCKPN 59
           +LF +L+  G  PNVFTY  ++N  C+         + A  + EEM   NGE      P 
Sbjct: 234 SLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEM-EMNGE-----SPT 287

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTY   I GLC+ G V+ A  L   ++  N   N   YN++IH FC   + +EA  L  
Sbjct: 288 VVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLE 347

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           +M   G+ P   S++++++ LCK G++++A  L+E M+Q  V+P+   Y++L DG C +G
Sbjct: 348 DMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSG 407

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
               +  +F ++ + G KH+V SY+ LING+   +++  A  L  EM   G  P+   +N
Sbjct: 408 LTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFN 467

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G  +  ++++A ++F  M + GV  + +      D   + G+  EA++L   ++ L
Sbjct: 468 RLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDL 527

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +   YN +I  LCK  + + AWE+   + +  +    + YN +I          KA
Sbjct: 528 GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKA 587

Query: 360 RDLFLDM 366
             L+  M
Sbjct: 588 LLLYAKM 594



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   LR+     N + YN +I+  CR G    A  L E+M +          P   +
Sbjct: 307 ALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHG------ISPTAYS 360

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +IDGLCK+G V+KA +L  +M   N+ P++VTY+SL  G C +     +  +F  + 
Sbjct: 361 YSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLG 420

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G + +V+S+N ++N       M  A +L+  M   G  PN+F +N L+ GFC   R++
Sbjct: 421 AEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLD 480

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A E+F  M  +G + N+F+ +I+ + + +      AL L +E+   GI P+   YN + 
Sbjct: 481 KALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVI 540

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  + E+A+++   M ++ V      Y T IDG  K     +A+ L+  +  +   
Sbjct: 541 KWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIP 600

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             I  Y  LI+      +++ A+ LF+ + +  L+ D + +  +I   C  G M  A  L
Sbjct: 601 PSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWAL 660

Query: 363 FLDME 367
           + +M 
Sbjct: 661 YEEMS 665



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 86/275 (31%), Positives = 146/275 (53%), Gaps = 6/275 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   G + N+FT N + +   R GH   AL L  E+     + G+V  PN+ 
Sbjct: 481 KALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQ----DLGIV--PNSY 534

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  LCKE   +KA E+   M   N+ P  + YN+LI G+   ++  +A  L+ +M
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKM 594

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ P++V++ +++N      KM EA  L + MI+ G+ P+  ++  ++ GFC  G +
Sbjct: 595 LKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDM 654

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   G   NV +Y+ LI+GY K K ++ A  L+++M    + PD + Y  L
Sbjct: 655 KSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTAL 714

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
             G   +   +R  ++F+EM+ +GV  +  AY T 
Sbjct: 715 IFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/293 (29%), Positives = 143/293 (48%), Gaps = 5/293 (1%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A ++F++ +   +  N+++ N L++ F  AN     + LF E+ D G  PNV ++ ++MN
Sbjct: 197 AADVFVQARRFGLELNILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMN 256

Query: 139 ELC-----KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             C     KN  + +A+ +LE M   G  P    Y   + G C  G V  A  L   +  
Sbjct: 257 YYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRI 316

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                N + Y+ +I+ +C+N E+  A  L  +M S GI P    Y+ L  GL +  QVE+
Sbjct: 317 RNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEK 376

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L +EM +  V      Y +  DGLCK+G    ++ +F  L    Y+ D+ +YN LI+
Sbjct: 377 ALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLIN 436

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G      +  A +L   +     + +  T+N +IH  C   ++DKA ++F  M
Sbjct: 437 GFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIM 489



 Score =  121 bits (304), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 118/244 (48%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  +++  G  PN +TYN +I  LC+   T  A  +   M   N        P  +
Sbjct: 516 EALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNN------VFPCAI 569

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+IDG  K+    KA  L+ KM    I P++VTY  LI+ F   +   EA  LF EM
Sbjct: 570 HYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEM 629

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ P+ + F  I+   CK G M  A  L E M Q G  PN   Y  L+DG+    R+
Sbjct: 630 IKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRM 689

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A+ LF  M+      +  +Y+ LI GY      +    +++EM   G+ P+   Y TL
Sbjct: 690 DKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYATL 749

Query: 242 FIGL 245
            + L
Sbjct: 750 GLHL 753



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/286 (26%), Positives = 137/286 (47%), Gaps = 5/286 (1%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           +D ++  +++  N LI  F   N   +A  +F++    G++ N++S N ++N   +  + 
Sbjct: 170 QDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQT 229

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG-----RVNRAEELFVSMESMGCKHNVF 201
           +    L E +   G  PN F Y  +M+ +C         + +A E+   ME  G    V 
Sbjct: 230 EFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVV 289

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y   I+G C+   +E AL L  ++  +    +   YN +        ++  AF+L ++M
Sbjct: 290 TYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDM 349

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
           + HG++   ++Y   IDGLCK G + +A++L   +     +  +  Y+ L DGLCKSG  
Sbjct: 350 RSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLT 409

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +I+  +F +L       DV++YN +I+       M  A  L  +M 
Sbjct: 410 EISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMR 455



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 5/252 (1%)

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D  +  +++  NV++    +N  + +A+ +     + G+  N    N L++ F    +  
Sbjct: 171 DAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTE 230

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCK-----NKEIEGALSLYSEMLSKGIKPDVVI 237
               LF  ++  G   NVF+Y+I++N YCK     N +I  A  +  EM   G  P VV 
Sbjct: 231 FIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVT 290

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y     GL     VE A +L  +++      +++ Y   I   C+NG + EA EL   +R
Sbjct: 291 YGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                    +Y+ LIDGLCK G+++ A +L   + +  +   +VTY+ +   LC  G  +
Sbjct: 351 SHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTE 410

Query: 358 KARDLFLDMEAK 369
            +  +F ++ A+
Sbjct: 411 ISLSMFHNLGAE 422


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 189/366 (51%), Gaps = 17/366 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + +A L ++LR +G  P+  + N +   LCR      A+ LF+E+           + NT
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLPLD-EAVQLFQELP----------EKNT 253

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++  LC  G +  A +LF +M      P+VVTY  ++HG+C  ++   A  L  E
Sbjct: 254 CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ N V++  ++  LC  G++ +A R++E M+  GV  +A V+ T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A   F  M+  G   +  +Y+ LING C+  E++ A  +  EM  KG+  D V Y  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++ ++  AF + ++M +  V  +   Y    DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            EL+I  YN LI+GLCK+G L+ A      +    L  DV TY  +I ALC   ++D+A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 361 DLFLDM 366
            L  +M
Sbjct: 551 SLLQEM 556



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 6/357 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G E N   Y ++I  LC  G    A+ + E+M       GVV   +   
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM----HGVVL--DAAV 357

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT++ G C++G +  A+  F +M+   +  + VTY +LI+G C A +  EA+ +  EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+  + V++ V+++  CK GKM EA  +   M+Q  V PN   Y  L DG C  G V 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M S G + N+F+Y+ LING CK   +E A+    +M   G+KPDV  Y T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  +++RA  L  EM   G+      Y   ++G C +G +     L   +      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +   YN L+   C    +K   E+++ +    ++ +  TYNI+I   C    M +A
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 167/341 (48%), Gaps = 6/341 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F +++  G   +  TY  LINGLCR G    A  + +EM +   +       + VTYT +
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV------DAVTYTVL 431

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           IDG CK G + +A  +  KM  + + PNVVTY +L  G C   D   A  L  EM  +G+
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           + N+ ++N ++N LCK G +++A R +  M + G++P+ + Y T++   C +  ++RA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           L   M   G K  + +Y++L+NG+C +  +EG   L   ML K I P+   YN+L     
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
               ++   +++  M    V  +   Y   I G CK   + EA+     +    + L   
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +YN LI  L K  +   A  LF  + +  L A+   YN  I
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 153/312 (49%), Gaps = 6/312 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G + +  TY  LI+G C+ G    A  +  +M            PN V
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR------VTPNVV 461

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT + DGLCK+G V  A EL  +M  + +  N+ TYNSLI+G C A +  +A    I+M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++P+V ++  I+  LC++ ++D A  LL+ M+  G++P    YN LM+GFC++GRV
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              + L   M       N  +Y+ L+  YC  K ++    +Y  MLS+ + P+   YN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A     EM   G      +Y   I  L K     EA  LF  +R  + 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRL 701

Query: 302 ELDIRAYNCLID 313
             +   YN  ID
Sbjct: 702 TAEPDVYNFYID 713



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 170/354 (48%), Gaps = 6/354 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
               P+V TY  +++G C       A+ L  EMA    E       N V YT++I  LC 
Sbjct: 279 MASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL------NPVAYTSVIALLCD 332

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V  A  +   M    +  +   + +++ GFC   D   A+  F EM  +G+  + V+
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++N LC+ G++ EA R+L+ M   G+  +A  Y  L+DG+C  G++  A  +   M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 NV +Y+ L +G CK  ++  A  L  EM SKG++ ++  YN+L  GL +   +E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A +   +M   G+  D + Y T I  LC++  +  A  L + +     +  I  YN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +G C SGR++    L   +    +  +  TYN ++   C +  M    +++  M
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 145/291 (49%), Gaps = 11/291 (3%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           +  L L+++   I+P+  + N+++         +EA  LF E+ ++    N  S+N+++ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLK 261

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LC  G++ +A +L +   ++   P+   Y  ++ G+C    +  A +L   M + G + 
Sbjct: 262 ALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N  +Y+ +I   C   ++  A+ +  +M+  G+  D  ++ T+  G      +  A   F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DEMQ+ G+AAD   Y   I+GLC+ G + EA  + + +     ++D   Y  LIDG CK 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G++  A+ +   + +  +  +VVTY  +   LC  G +  A +L  +M +K
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 191/356 (53%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV T N +++ LC+      A ++FE + +        C+P+ VTY ++I+GL + 
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK------TCRPDAVTYCSLIEGLGRH 492

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD+A +L+ +M D N  PN V Y SLI  F       +   ++ EM+  G  P+++  
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  M+ + K G++++   L + +  +G  P+A  Y  L+ G    G  + A ELF +M+ 
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE 612

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+G+CK+ ++  A  L  EM +KG +P VV Y ++  GL +I +++ 
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDE 672

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A+ LF+E +  G+  +   Y + IDG  K G I EA  +   L       ++  +NCL+D
Sbjct: 673 AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L K+  +  A   F+S+       + +TY+I+IH LC   K +KA   + +M+ +
Sbjct: 733 ALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 182/358 (50%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  + R  GC P+V +YN +++ L R G    AL  FEEM            PN  
Sbjct: 358 DAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD-------AIPNLS 410

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LCK G ++ A  +   MKD  + PNV+T N ++   C A   ++A  +F  +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +  +P+ V++  ++  L ++G++DEA +L E M+     PNA VY +L+  F   GR 
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +++  M  +GC  ++   +  ++   K  EIE   +L+ E+ + G  PD   Y  L
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +      A++LF  M+  G   DT AY T IDG CK+G + +A +L   ++   +
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           E  +  Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 163/314 (51%), Gaps = 6/314 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF +++  G  P+  +Y  LI+GL + G    A  LF  M          C  +T  Y 
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG------CVLDTRAYN 623

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+IDG CK G V+KA +L  +MK +   P VVTY S+I G    +  +EA  LF E   +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV ++ +++   K G++DEA  ++E ++Q G+ PN + +N L+D       ++ A
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F SM+ + C  N  +YSILI+G CK ++   A   + EM  +G KP+V  Y T+  G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +   +  A  LF++ +  G  AD+  Y   I+GL       +A  LF   R+    + 
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863

Query: 305 IRAYNCLIDGLCKS 318
            +    L+D L K+
Sbjct: 864 TKTCVVLLDSLHKA 877



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 168/319 (52%), Gaps = 12/319 (3%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P++   NT ++ + + G       LF+E+ N     G +  P+  +YT +I GL K
Sbjct: 543 LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKN----LGFI--PDARSYTILIHGLVK 596

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            GF  +A ELF  MK++    +   YN++I GFC +   N+A  L  EM  +G +P VV+
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVT 656

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++ L K  ++DEA  L E     G+  N  +Y++L+DGF   G+V R +E ++ ME
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF---GKVGRIDEAYLIME 713

Query: 193 SM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +   G   NV++++ L++   K +EI  AL  +  M      P+ + Y+ L  GL +I 
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +  +AF  + EMQ+ G   + + Y T I GL K G IVEA  LF   +      D   YN
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833

Query: 310 CLIDGLCKSGRLKIAWELF 328
            +I+GL  + R   A+ LF
Sbjct: 834 AIIEGLSNANRASDAYRLF 852



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 188/402 (46%), Gaps = 42/402 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A +L  +++    EP+V  YN  I+   + G   +A   F EM ANG          + V
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANG-------LVLDDV 306

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF--- 118
           TYT++I  LCK   +++A ELF  M      P    YN++I G+  A  + +A  L    
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366

Query: 119 -------------------------------IEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                                           E M +   PN+ ++N++++ LCK GK++
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLE 426

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
            A  + + M   G+ PN    N ++D  C   R++ A  +F  ++   C+ +  +Y  LI
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G  ++  ++ A  LY +ML     P+ V+Y +L    F+  + E   K+++EM R G +
Sbjct: 487 EGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D     T++D + K G I +   LF+ ++ L +  D R+Y  LI GL K+G    A+EL
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F ++     + D   YN +I   C  GK++KA  L  +M+ K
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 181/397 (45%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A ++F  L    C P+  TY +LI GL R G    A  L+E+M + N     V      
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C P+ +   T +D + K G ++K + LF ++K+    
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  +Y  LIHG   A   +EA  LF  M +QG   +  ++N +++  CK+GK+++A +L
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M   G  P    Y +++DG     R++ A  LF   +S G + NV  YS LI+G+ K
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  +  E++ KG+ P+V  +N L   L +  ++  A   F  M+      +   
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I GLCK     +A   ++ ++   ++ ++  Y  +I GL K+G +  A  LF    
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               +AD   YN +I  L    +   A  LF +   K
Sbjct: 822 EKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLK 858



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 151/296 (51%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  ++  GC  +   YNT+I+G C++G    A  L EEM     E      P  V
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE------PTVV 655

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++IDGL K   +D+A  LF + K + I  NVV Y+SLI GF      +EA  +  E+
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV ++N +++ L K  ++ EA    + M  +   PN   Y+ L+ G C   + 
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A   +  M+  G K NVF+Y+ +I+G  K   I  A +L+ +   KG   D  IYN +
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAI 835

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             GL   ++   A++LF+E +  G +  T      +D L K   I +A  +   LR
Sbjct: 836 IEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 1/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P    YT +I  L      D    LF +M++     NV  + +LI  F      + A  
Sbjct: 197 RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALS 256

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM    ++P+VV +NV ++   K GK+D A +    M   G+  +   Y +++   C
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLC 316

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R+N A ELF  M+        ++Y+ +I GY    + E A SL      KG  P VV
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVV 376

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +   L    QV+ A K F+EM++  +  +   Y   ID LCK G +  A+ +   +
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM 435

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      ++   N ++D LCK+ RL  A  +F  L       D VTY  +I  L   G++
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495

Query: 357 DKARDLFLDM 366
           D+A  L+  M
Sbjct: 496 DEAYKLYEQM 505



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 158/349 (45%), Gaps = 7/349 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
            YN+L+  + RT        + EEM+     FG    P+  T   I+    K   + +A 
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAG--FG----PSNNTCIEIVLSFIKSRKLREAF 185

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
                M+     P    Y +LI     + D +    LF +M + G   NV  F  ++   
Sbjct: 186 TFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVF 245

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            + G++D A  LL+ M    + P+  +YN  +D F   G+V+ A + F  M++ G   + 
Sbjct: 246 AREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDD 305

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ +I   CK   +  A+ L+  M      P    YNT+ +G     + E A+ L + 
Sbjct: 306 VTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
            +R G      +Y   +  L + G + EA++ F  ++      ++  YN +ID LCK+G+
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGK 424

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+ A  +  ++    L  +V+T NIM+  LC   ++D A  +F  ++ K
Sbjct: 425 LETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 191/356 (53%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV T N +++ LC+      A ++FE + +        C+P+ VTY ++I+GL + 
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK------TCRPDAVTYCSLIEGLGRH 492

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD+A +L+ +M D N  PN V Y SLI  F       +   ++ EM+  G  P+++  
Sbjct: 493 GRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLL 552

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  M+ + K G++++   L + +  +G  P+A  Y  L+ G    G  + A ELF +M+ 
Sbjct: 553 NTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE 612

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+ +I+G+CK+ ++  A  L  EM +KG +P VV Y ++  GL +I +++ 
Sbjct: 613 QGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDE 672

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A+ LF+E +  G+  +   Y + IDG  K G I EA  +   L       ++  +NCL+D
Sbjct: 673 AYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 732

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L K+  +  A   F+S+       + +TY+I+IH LC   K +KA   + +M+ +
Sbjct: 733 ALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQ 788



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 182/358 (50%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  + R  GC P+V +YN +++ L R G    AL  FEEM            PN  
Sbjct: 358 DAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKD-------AIPNLS 410

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LCK G ++ A  +   MKD  + PNV+T N ++   C A   ++A  +F  +
Sbjct: 411 TYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +  +P+ V++  ++  L ++G++DEA +L E M+     PNA VY +L+  F   GR 
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRK 530

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +++  M  +GC  ++   +  ++   K  EIE   +L+ E+ + G  PD   Y  L
Sbjct: 531 EDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTIL 590

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +      A++LF  M+  G   DT AY T IDG CK+G + +A +L   ++   +
Sbjct: 591 IHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGH 650

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           E  +  Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A
Sbjct: 651 EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEA 708



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 163/314 (51%), Gaps = 6/314 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF +++  G  P+  +Y  LI+GL + G    A  LF  M          C  +T  Y 
Sbjct: 570 ALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQG------CVLDTRAYN 623

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+IDG CK G V+KA +L  +MK +   P VVTY S+I G    +  +EA  LF E   +
Sbjct: 624 TVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 683

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV ++ +++   K G++DEA  ++E ++Q G+ PN + +N L+D       ++ A
Sbjct: 684 GIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEA 743

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F SM+ + C  N  +YSILI+G CK ++   A   + EM  +G KP+V  Y T+  G
Sbjct: 744 LVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISG 803

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +   +  A  LF++ +  G  AD+  Y   I+GL       +A  LF   R+    + 
Sbjct: 804 LAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIY 863

Query: 305 IRAYNCLIDGLCKS 318
            +    L+D L K+
Sbjct: 864 TKTCVVLLDSLHKA 877



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/319 (33%), Positives = 168/319 (52%), Gaps = 12/319 (3%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P++   NT ++ + + G       LF+E+ N     G +  P+  +YT +I GL K
Sbjct: 543 LGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKN----LGFI--PDARSYTILIHGLVK 596

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            GF  +A ELF  MK++    +   YN++I GFC +   N+A  L  EM  +G +P VV+
Sbjct: 597 AGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVT 656

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++ L K  ++DEA  L E     G+  N  +Y++L+DGF   G+V R +E ++ ME
Sbjct: 657 YGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGF---GKVGRIDEAYLIME 713

Query: 193 SM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +   G   NV++++ L++   K +EI  AL  +  M      P+ + Y+ L  GL +I 
Sbjct: 714 ELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIR 773

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +  +AF  + EMQ+ G   + + Y T I GL K G IVEA  LF   +      D   YN
Sbjct: 774 KFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYN 833

Query: 310 CLIDGLCKSGRLKIAWELF 328
            +I+GL  + R   A+ LF
Sbjct: 834 AIIEGLSNANRASDAYRLF 852



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 188/402 (46%), Gaps = 42/402 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A +L  +++    EP+V  YN  I+   + G   +A   F EM ANG          + V
Sbjct: 254 ALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANG-------LVLDDV 306

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF--- 118
           TYT++I  LCK   +++A ELF  M      P    YN++I G+  A  + +A  L    
Sbjct: 307 TYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQ 366

Query: 119 -------------------------------IEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                                           E M +   PN+ ++N++++ LCK GK++
Sbjct: 367 RRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKAGKLE 426

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
            A  + + M   G+ PN    N ++D  C   R++ A  +F  ++   C+ +  +Y  LI
Sbjct: 427 TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLI 486

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G  ++  ++ A  LY +ML     P+ V+Y +L    F+  + E   K+++EM R G +
Sbjct: 487 EGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCS 546

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D     T++D + K G I +   LF+ ++ L +  D R+Y  LI GL K+G    A+EL
Sbjct: 547 PDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYEL 606

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           F ++     + D   YN +I   C  GK++KA  L  +M+ K
Sbjct: 607 FYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTK 648



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 181/397 (45%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A ++F  L    C P+  TY +LI GL R G    A  L+E+M + N     V      
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C P+ +   T +D + K G ++K + LF ++K+    
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  +Y  LIHG   A   +EA  LF  M +QG   +  ++N +++  CK+GK+++A +L
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M   G  P    Y +++DG     R++ A  LF   +S G + NV  YS LI+G+ K
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  +  E++ KG+ P+V  +N L   L +  ++  A   F  M+      +   
Sbjct: 702 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYIT 761

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I GLCK     +A   ++ ++   ++ ++  Y  +I GL K+G +  A  LF    
Sbjct: 762 YSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFK 821

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               +AD   YN +I  L    +   A  LF +   K
Sbjct: 822 EKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLK 858



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 151/296 (51%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  ++  GC  +   YNT+I+G C++G    A  L EEM     E      P  V
Sbjct: 602 EAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHE------PTVV 655

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++IDGL K   +D+A  LF + K + I  NVV Y+SLI GF      +EA  +  E+
Sbjct: 656 TYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 715

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV ++N +++ L K  ++ EA    + M  +   PN   Y+ L+ G C   + 
Sbjct: 716 MQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKF 775

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A   +  M+  G K NVF+Y+ +I+G  K   I  A +L+ +   KG   D  IYN +
Sbjct: 776 NKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAI 835

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             GL   ++   A++LF+E +  G +  T      +D L K   I +A  +   LR
Sbjct: 836 IEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 142/310 (45%), Gaps = 1/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P    YT +I  L      D    LF +M++     NV  + +LI  F      + A  
Sbjct: 197 RPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALS 256

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM    ++P+VV +NV ++   K GK+D A +    M   G+  +   Y +++   C
Sbjct: 257 LLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLC 316

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R+N A ELF  M+        ++Y+ +I GY    + E A SL      KG  P VV
Sbjct: 317 KADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVV 376

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +   L    QV+ A K F+EM++  +  +   Y   ID LCK G +  A+ +   +
Sbjct: 377 SYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAM 435

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      ++   N ++D LCK+ RL  A  +F  L       D VTY  +I  L   G++
Sbjct: 436 KDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRV 495

Query: 357 DKARDLFLDM 366
           D+A  L+  M
Sbjct: 496 DEAYKLYEQM 505



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 158/349 (45%), Gaps = 7/349 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
            YN+L+  + RT        + EEM+     FG    P+  T   I+    K   + +A 
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAG--FG----PSNNTCIEIVLSFIKSRKLREAF 185

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
                M+     P    Y +LI     + D +    LF +M + G   NV  F  ++   
Sbjct: 186 TFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVF 245

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            + G++D A  LL+ M    + P+  +YN  +D F   G+V+ A + F  M++ G   + 
Sbjct: 246 AREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDD 305

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ +I   CK   +  A+ L+  M      P    YNT+ +G     + E A+ L + 
Sbjct: 306 VTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
            +R G      +Y   +  L + G + EA++ F  ++      ++  YN +ID LCK+G+
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIP-NLSTYNIMIDMLCKAGK 424

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+ A  +  ++    L  +V+T NIM+  LC   ++D A  +F  ++ K
Sbjct: 425 LETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHK 473


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  195 bits (495), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/366 (32%), Positives = 189/366 (51%), Gaps = 17/366 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + +A L ++LR +G  P+  + N +   LCR      A+ LF+E+           + NT
Sbjct: 208 LPSAPLLLRLRQYGISPSPESCNAV---LCRLPLD-EAVQLFQELP----------EKNT 253

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++  LC  G +  A +LF +M      P+VVTY  ++HG+C  ++   A  L  E
Sbjct: 254 CSYNILLKALCTAGRIKDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSE 310

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ N V++  ++  LC  G++ +A R++E M+  GV  +A V+ T+M GFC  G 
Sbjct: 311 MAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGD 370

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A   F  M+  G   +  +Y+ LING C+  E++ A  +  EM  KG+  D V Y  
Sbjct: 371 LAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTV 430

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++ ++  AF + ++M +  V  +   Y    DGLCK G +  A EL   +    
Sbjct: 431 LIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKG 490

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            EL+I  YN LI+GLCK+G L+ A      +    L  DV TY  +I ALC   ++D+A 
Sbjct: 491 LELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAH 550

Query: 361 DLFLDM 366
            L  +M
Sbjct: 551 SLLQEM 556



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 175/357 (49%), Gaps = 6/357 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G E N   Y ++I  LC  G    A+ + E+M       GVV   +   
Sbjct: 304 AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVM----HGVVL--DAAV 357

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT++ G C++G +  A+  F +M+   +  + VTY +LI+G C A +  EA+ +  EM 
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+  + V++ V+++  CK GKM EA  +   M+Q  V PN   Y  L DG C  G V 
Sbjct: 418 DKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVC 477

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M S G + N+F+Y+ LING CK   +E A+    +M   G+KPDV  Y T+ 
Sbjct: 478 AANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTII 537

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  +++RA  L  EM   G+      Y   ++G C +G +     L   +      
Sbjct: 538 GALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIH 597

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +   YN L+   C    +K   E+++ +    ++ +  TYNI+I   C    M +A
Sbjct: 598 PNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEA 654



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/341 (30%), Positives = 167/341 (48%), Gaps = 6/341 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F +++  G   +  TY  LINGLCR G    A  + +EM +   +       + VTYT +
Sbjct: 378 FDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDV------DAVTYTVL 431

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           IDG CK G + +A  +  KM  + + PNVVTY +L  G C   D   A  L  EM  +G+
Sbjct: 432 IDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGL 491

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           + N+ ++N ++N LCK G +++A R +  M + G++P+ + Y T++   C +  ++RA  
Sbjct: 492 ELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHS 551

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           L   M   G K  + +Y++L+NG+C +  +EG   L   ML K I P+   YN+L     
Sbjct: 552 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYC 611

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
               ++   +++  M    V  +   Y   I G CK   + EA+     +    + L   
Sbjct: 612 IEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTAS 671

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +YN LI  L K  +   A  LF  + +  L A+   YN  I
Sbjct: 672 SYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 153/312 (49%), Gaps = 6/312 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G + +  TY  LI+G C+ G    A  +  +M            PN V
Sbjct: 408 EAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKR------VTPNVV 461

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT + DGLCK+G V  A EL  +M  + +  N+ TYNSLI+G C A +  +A    I+M
Sbjct: 462 TYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDM 521

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G++P+V ++  I+  LC++ ++D A  LL+ M+  G++P    YN LM+GFC++GRV
Sbjct: 522 DEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 581

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              + L   M       N  +Y+ L+  YC  K ++    +Y  MLS+ + P+   YN L
Sbjct: 582 EGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNIL 641

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A     EM   G      +Y   I  L K     EA  LF  +R  + 
Sbjct: 642 IKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERL 701

Query: 302 ELDIRAYNCLID 313
             +   YN  ID
Sbjct: 702 TAEPDVYNFYID 713



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 170/354 (48%), Gaps = 6/354 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
               P+V TY  +++G C       A+ L  EMA    E       N V YT++I  LC 
Sbjct: 279 MASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL------NPVAYTSVIALLCD 332

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V  A  +   M    +  +   + +++ GFC   D   A+  F EM  +G+  + V+
Sbjct: 333 EGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVT 392

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  ++N LC+ G++ EA R+L+ M   G+  +A  Y  L+DG+C  G++  A  +   M 
Sbjct: 393 YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMV 452

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 NV +Y+ L +G CK  ++  A  L  EM SKG++ ++  YN+L  GL +   +E
Sbjct: 453 QKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLE 512

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A +   +M   G+  D + Y T I  LC++  +  A  L + +     +  I  YN L+
Sbjct: 513 QAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLM 572

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +G C SGR++    L   +    +  +  TYN ++   C +  M    +++  M
Sbjct: 573 NGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGM 626



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/291 (25%), Positives = 145/291 (49%), Gaps = 11/291 (3%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           +  L L+++   I+P+  + N+++         +EA  LF E+ ++    N  S+N+++ 
Sbjct: 210 SAPLLLRLRQYGISPSPESCNAVLCRL----PLDEAVQLFQELPEK----NTCSYNILLK 261

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LC  G++ +A +L +   ++   P+   Y  ++ G+C    +  A +L   M + G + 
Sbjct: 262 ALCTAGRIKDAHQLFD---EMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLEL 318

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N  +Y+ +I   C   ++  A+ +  +M+  G+  D  ++ T+  G      +  A   F
Sbjct: 319 NPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWF 378

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DEMQ+ G+AAD   Y   I+GLC+ G + EA  + + +     ++D   Y  LIDG CK 
Sbjct: 379 DEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKV 438

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G++  A+ +   + +  +  +VVTY  +   LC  G +  A +L  +M +K
Sbjct: 439 GKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSK 489


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 188/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  ++   G +PNV+T+   I  L R G    A  + + M +        C P+ VTYT
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGPDVVTYT 297

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +ID LC    +D AKE+F KMK     P+ VTY +L+  F    D +  K  + EM   
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+VV+F ++++ LCK G   EA   L++M   G+ PN   YNTL+ G     R++ A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            ELF +MES+G K   ++Y + I+ Y K+ +   AL  + +M +KGI P++V  N     
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  +   A ++F  ++  G+  D+  Y   +    K G I EA++L   +     E D
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +   N LI+ L K+ R+  AW++F  +    L   VVTYN ++  L  +GK+ +A +LF 
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597

Query: 365 DMEAK 369
            M  K
Sbjct: 598 GMVQK 602



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 100/296 (33%), Positives = 164/296 (55%), Gaps = 8/296 (2%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  +F++++  GC P+V TYN L++   ++G       L++EM+         C+ NT+T
Sbjct: 804  AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE------CEANTIT 857

Query: 63   YTTIIDGLCKEGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I GL K G VD A +L+   M D + +P   TY  LI G   +    EAK LF  M
Sbjct: 858  HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917

Query: 122  MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +D G +PN   +N+++N   K G+ D A  L + M++ GVRP+   Y+ L+D  C+ GRV
Sbjct: 918  LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977

Query: 182  NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNT 240
            +     F  ++  G   +V  Y+++ING  K+  +E AL L++EM  S+GI PD+  YN+
Sbjct: 978  DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            L + L     VE A K+++E+QR G+  + + +   I G   +G    A  +++T+
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 195/402 (48%), Gaps = 43/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   GC P+V TY  LI+ LC       A  +FE+M  G        KP+ V
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH------KPDRV 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D       +D  K+ + +M+ +   P+VVT+  L+   C A ++ EA      M
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD-------- 173
            DQG+ PN+ ++N ++  L +  ++D+A  L   M  +GV+P A+ Y   +D        
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449

Query: 174 ---------------------------GFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                           GR   A+++F  ++ +G   +  +Y+++
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +  Y K  EI+ A+ L SEM+  G +PDV++ N+L   L++  +V+ A+K+F  M+   +
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                 Y T + GL KNG I EA+ELF  +       +   +N L D LCK+  + +A +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629

Query: 327 -LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            LF+ +  G  + DV TYN +I  L  +G++ +A   F  M+
Sbjct: 630 MLFKMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 7/318 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G  PN+ TYNTLI GL R      AL LF  M +     GV  KP   TY   ID 
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES----LGV--KPTAYTYIVFIDY 442

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
             K G    A E F KMK + I PN+V  N+ ++    A    EAK +F  + D G+ P+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            V++N++M    K G++DEA +LL  M++ G  P+  V N+L++      RV+ A ++F+
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M+ M  K  V +Y+ L+ G  KN +I+ A+ L+  M+ KG  P+ + +NTLF  L +  
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +V  A K+  +M   G   D + Y T I GL KNG + EA+  F  ++ L Y  D     
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLC 681

Query: 310 CLIDGLCKSGRLKIAWEL 327
            L+ G+ K+  ++ A+++
Sbjct: 682 TLLPGVVKASLIEDAYKI 699



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 180/344 (52%), Gaps = 9/344 (2%)

Query: 3    AAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF K  +  G +P + TYN LI GL       +A ++F ++ +        C P+  
Sbjct: 768  ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG------CIPDVA 821

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY  ++D   K G +D+  EL+ +M       N +T+N +I G   A + ++A  L+ ++
Sbjct: 822  TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881

Query: 122  M-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M D+   P   ++  +++ L K+G++ EA +L E M+  G RPN  +YN L++GF   G 
Sbjct: 882  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             + A  LF  M   G + ++ +YS+L++  C    ++  L  + E+   G+ PDVV YN 
Sbjct: 942  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001

Query: 241  LFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GL + H++E A  LF+EM+   G+  D + Y + I  L   G + EA +++  ++  
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061

Query: 300  KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
              E ++  +N LI G   SG+ + A+ +++++  G    +  TY
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     K+R FG   N ++YN LI+ L ++     A+ ++  M           +P+  
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG------FRPSLQ 224

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++ GL K   +D    L  +M+   + PNV T+   I     A   NEA  +   M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VV++ V+++ LC   K+D A  + E M     +P+   Y TL+D F     +
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  ++ +  ME  G   +V +++IL++  CK      A      M  +GI P++  YNTL
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  +H+++ A +LF  M+  GV    + Y  FID   K+G  V A+E F  ++    
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I A N  +  L K+GR + A ++F  L    L+ D VTYN+M+      G++D+A  
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524

Query: 362 LFLDM 366
           L  +M
Sbjct: 525 LLSEM 529



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 184/364 (50%), Gaps = 22/364 (6%)

Query: 20   FTYNTLINGLCRTGHTIV---------------ALNLFEEMANGNGEFGVVCKPNTVTYT 64
            F+   + NG+CR G +I+               A  LFE+      + GV  +P   TY 
Sbjct: 735  FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK---DLGV--QPKLPTYN 789

Query: 65   TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
             +I GL +   ++ A+++FL++K     P+V TYN L+  +  +   +E   L+ EM   
Sbjct: 790  LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849

Query: 125  GVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
              + N ++ N++++ L K G +D+A  L  +LM      P A  Y  L+DG   +GR+  
Sbjct: 850  ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909

Query: 184  AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
            A++LF  M   GC+ N   Y+ILING+ K  E + A +L+  M+ +G++PD+  Y+ L  
Sbjct: 910  AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-YE 302
             L  + +V+     F E++  G+  D   Y   I+GL K+  + EA+ LF  ++  +   
Sbjct: 970  CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             D+  YN LI  L  +G ++ A +++  + R  L  +V T+N +I      GK + A  +
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089

Query: 363  FLDM 366
            +  M
Sbjct: 1090 YQTM 1093



 Score =  153 bits (386), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/329 (30%), Positives = 167/329 (50%), Gaps = 7/329 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V T+  L++ LC+ G+   A +  + M +     G++  PN  TY T+I GL + 
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ----GIL--PNLHTYNTLICGLLRV 411

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D A ELF  M+   + P   TY   I  +  + D   A   F +M  +G+ PN+V+ 
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  +  L K G+  EA ++   +  IG+ P++  YN +M  +   G ++ A +L   M  
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ +V   + LIN   K   ++ A  ++  M    +KP VV YNTL  GL +  +++ 
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LF+ M + G   +T  + T  D LCKN  +  A+++   +  +    D+  YN +I 
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           GL K+G++K A   F  + + ++  D VT
Sbjct: 652 GLVKNGQVKEAMCFFHQMKK-LVYPDFVT 679



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 65/415 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +   G +P  +TY   I+   ++G ++ AL  FE+M       G+   PN V
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK----GIA--PNIV 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
                +  L K G   +AK++F  +KD  + P+ VTYN ++  +    + +EA  L  EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G +P+V+  N ++N L K  ++DEA ++   M ++ ++P    YNTL+ G    G++
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ELF  M   GC  N  +++ L +  CKN E+  AL +  +M+  G  PDV  YNT+
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  QV+ A   F +M++  V  D     T + G+ K   I +A ++         
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNF----- 703

Query: 302 ELDIRAYNC--------------------------------LIDGLCKSG---------- 319
                 YNC                                + +G+C+ G          
Sbjct: 704 -----LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758

Query: 320 -----RLKIAWELFRSLPRGVLI-ADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
                 +  A  LF    + + +   + TYN++I  L     ++ A+D+FL +++
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 186/405 (45%), Gaps = 46/405 (11%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  +  K+   GC P+VFTYNT+I GL + G    A+  F +M         +  P+ VT
Sbjct: 627  ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-------LVYPDFVT 679

Query: 63   YTTIIDGLCKEGFVDKAKELFLKM----KDENIN----------------PNVVTYN--- 99
              T++ G+ K   ++ A ++         D+  N                 N V+++   
Sbjct: 680  LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739

Query: 100  --------------SLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNG 144
                           +I   C  N+ + A+ LF +   D GVQP + ++N+++  L +  
Sbjct: 740  VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             ++ A  +   +   G  P+   YN L+D +  +G+++   EL+  M +  C+ N  +++
Sbjct: 800  MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859

Query: 205  ILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
            I+I+G  K   ++ AL LY +++S +   P    Y  L  GL +  ++  A +LF+ M  
Sbjct: 860  IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919

Query: 264  HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            +G   +   Y   I+G  K G    A  LF+ +       D++ Y+ L+D LC  GR+  
Sbjct: 920  YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979

Query: 324  AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
                F+ L    L  DVV YN++I+ L    ++++A  LF +M+ 
Sbjct: 980  GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 150/315 (47%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           + K +T TY TI   L  +G + +A     KM++     N  +YN LIH    +    EA
Sbjct: 148 IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 207

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             ++  M+ +G +P++ +++ +M  L K   +D    LL+ M  +G++PN + +   +  
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
               G++N A E+   M+  GC  +V +Y++LI+  C  ++++ A  ++ +M +   KPD
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
            V Y TL     +   ++   + + EM++ G   D   +   +D LCK G   EA +   
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +R      ++  YN LI GL +  RL  A ELF ++    +     TY + I      G
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447

Query: 355 KMDKARDLFLDMEAK 369
               A + F  M+ K
Sbjct: 448 DSVSALETFEKMKTK 462



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 16   EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
             P   TY  LI+GL ++G    A  LFE M     ++G  C+PN   Y  +I+G  K G 
Sbjct: 888  SPTACTYGPLIDGLSKSGRLYEAKQLFEGML----DYG--CRPNCAIYNILINGFGKAGE 941

Query: 76   VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             D A  LF +M  E + P++ TY+ L+   C     +E    F E+ + G+ P+VV +N+
Sbjct: 942  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001

Query: 136  IMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            I+N L K+ +++EA  L  E+    G+ P+ + YN+L+    + G V  A +++  ++  
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061

Query: 195  GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            G + NVF+++ LI GY  + + E A ++Y  M++ G  P+   Y  L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 7/208 (3%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  LF  +  +GC PN   YN LING  + G    A  LF+ M     + GV  +P+  
Sbjct: 909  EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV----KEGV--RPDLK 962

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY+ ++D LC  G VD+    F ++K+  +NP+VV YN +I+G   ++   EA  LF EM
Sbjct: 963  TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022

Query: 122  -MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               +G+ P++ ++N ++  L   G ++EA ++   + + G+ PN F +N L+ G+ L+G+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILIN 208
               A  ++ +M + G   N  +Y  L N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/357 (33%), Positives = 191/357 (53%), Gaps = 9/357 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P++FT+N +I+G C+TG     L    ++A     +GV   P+  TY T+IDG CK G 
Sbjct: 185 SPDLFTFNIVISGFCKTGQ----LRKAGDVAKNISAWGVA--PSVATYNTLIDGYCKRGQ 238

Query: 76  VDK---AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           V K      L  +M    I+P+VVT+N LI+G+C   +   A  +F EM  QG+  NVV+
Sbjct: 239 VGKMYHVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVT 298

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++ LC+ GK++++ +L+E M ++G+       N++++GFC  G +  AE     + 
Sbjct: 299 YNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIA 358

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G K NV +Y+ L++GY +  +++ A +    M  KGI P+V  YN L  G        
Sbjct: 359 QRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWR 418

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
               L DEM+  GV AD   Y   I  LC  G + +AV+L   +  +  E    AYN +I
Sbjct: 419 SVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTII 478

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +G C+ G  + A E+   + +    A+VVTYN+ +   C  GKMD+A  +  +M  K
Sbjct: 479 NGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEK 535



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 173/348 (49%), Gaps = 9/348 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALN---LFEEMANGNGEFGVVCKPNTVTYTTI 66
           +  +G  P+V TYNTLI+G C+ G      +   L +EM            P+ VT+  +
Sbjct: 214 ISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAG------ISPDVVTFNVL 267

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I+G CKE  +  A ++F +M+ + I  NVVTYNSL+ G C      ++  L  EM + G+
Sbjct: 268 INGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGL 327

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
              + + N ++N  CK G M EA   ++ + Q G++PN   YNTL+DG+   G++  A  
Sbjct: 328 ACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAA 387

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
              +M   G   NV +Y+ LI G+  +++      L  EM  KG+K DVV YN L   L 
Sbjct: 388 AKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALC 447

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              +V +A KL DEM   G+     AY T I+G C+ G    A E+   +   K   ++ 
Sbjct: 448 CKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVV 507

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            YN  +   CK G++  A  +   +    L+ + +TY I+   +   G
Sbjct: 508 TYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKG 555



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 146/280 (52%), Gaps = 41/280 (14%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++R  G   NV TYN+L++GLCR G    ++ L EEM     E G+ C  +T+ 
Sbjct: 280 AIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEME----ELGLACILSTMN 335

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS---------------------- 100
             ++++G CK+G + +A+     +    + PNV+TYN+                      
Sbjct: 336 --SVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMA 393

Query: 101 -------------LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                        LI GF  + DW     L  EM ++GV+ +VV++NV++  LC  G++ 
Sbjct: 394 GKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVR 453

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A +LL+ M+++G+ P    YNT+++GFC  G    A E+ + ME    + NV +Y++ +
Sbjct: 454 KAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFL 513

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
             +CK  +++ A  + +EML KG+ P+ + Y  +  G+ E
Sbjct: 514 KYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIE 553



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/312 (29%), Positives = 154/312 (49%), Gaps = 38/312 (12%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  + N+L+     A+  + A   F   + + V P++ +FN++++  CK G++ +A  +
Sbjct: 151 PSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGDV 210

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNR---AEELFVSMESMGCKHNVFSYSILING 209
            + +   GV P+   YNTL+DG+C  G+V +    + L   M   G   +V ++++LING
Sbjct: 211 AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLING 270

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           YCK   I  A+ ++ EM  +GI  +VV YN+L  GL    +VE + KL +EM+  G+A  
Sbjct: 271 YCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLACI 330

Query: 270 TWAYRTFIDGLCKNGYIVEA----------------------VELFRTLRILKY------ 301
                + ++G CK G +VEA                      V+ +R L  +K       
Sbjct: 331 LSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKD 390

Query: 302 -------ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
                    +++ YNCLI G   S   +    L   +    + ADVVTYN++I ALC  G
Sbjct: 391 AMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKG 450

Query: 355 KMDKARDLFLDM 366
           ++ KA  L  +M
Sbjct: 451 EVRKAVKLLDEM 462



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 122/225 (54%), Gaps = 5/225 (2%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           +P+  S N ++  L +  ++D A R     ++  V P+ F +N ++ GFC TG++ +A +
Sbjct: 150 RPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGD 209

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL----SLYSEMLSKGIKPDVVIYNTLF 242
           +  ++ + G   +V +Y+ LI+GYCK  ++ G +    +L  EM+  GI PDVV +N L 
Sbjct: 210 VAKNISAWGVAPSVATYNTLIDGYCKRGQV-GKMYHVDALLKEMIQAGISPDVVTFNVLI 268

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +   +  A K+F EM++ G+ A+   Y + + GLC+ G + ++++L   +  L   
Sbjct: 269 NGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLA 328

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
             +   N +++G CK G +  A      + +  +  +V+TYN ++
Sbjct: 329 CILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLV 373



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 48/147 (32%), Positives = 80/147 (54%), Gaps = 6/147 (4%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           + L  +++  G + +V TYN LI  LC  G    A+ L +EM     E G+  +P  V Y
Sbjct: 421 SGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMV----EVGL--EPKHVAY 474

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
            TII+G C++G    A E+ L+M+      NVVTYN  +  FC     +EA  +  EM++
Sbjct: 475 NTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLE 534

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEAS 150
           +G+ PN +++ +I + + + G + + S
Sbjct: 535 KGLVPNRITYEIINSGMIEKGYVPDIS 561


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  195 bits (495), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 181/362 (50%), Gaps = 10/362 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++   GC P V TY  L+ GLCR            +        G V + N V
Sbjct: 263 EAARLVDRMMTKGCMPGVMTYGFLLQGLCR----------VRQADEARAMLGRVPELNVV 312

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T+I G   EG + +A EL+  M  +   P+  TY+ L+HG C       A  L  EM
Sbjct: 313 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 372

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNVV++ ++++  CKNG  D+   LLE M   G+  N+  YN ++   C  GR+
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M S GC  ++ SY+ +I   C N+++E A  ++  +L +G+  + + YNT+
Sbjct: 433 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 492

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    + + A +L  EM  HG + D  +Y   I  +CK+G +  ++ L   +     
Sbjct: 493 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 552

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +  +YN LI  LCK  R++ A EL + +    L  D+VTYN +I+ LC  G M  A +
Sbjct: 553 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 612

Query: 362 LF 363
           L 
Sbjct: 613 LL 614



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 177/368 (48%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +   GC P+   Y T+I+ LC  G    A  L  EM        + C  +  
Sbjct: 193 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM------LLMGCAADVN 246

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ G+C  G V +A  L  +M  +   P V+TY  L+ G C     +EA+     M
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA----M 302

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV FN ++      GK+ EA+ L E M   G +P+A  Y+ LM G C  GR+
Sbjct: 303 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 362

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   ME  G   NV +Y+I+++ +CKN   +   +L  EM +KG+  +   YN +
Sbjct: 363 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 422

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +++ A  L  EM+  G   D  +Y T I  LC N  + EA  +F  L     
Sbjct: 423 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 482

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN +I  L + GR + A  L + +       DVV+YN +I A+C DG +D++  
Sbjct: 483 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 542

Query: 362 LFLDMEAK 369
           L  +M  K
Sbjct: 543 LLEEMAEK 550



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 178/387 (45%), Gaps = 36/387 (9%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R FG +P+  +YN +++ L R      AL L+  M + +        P T T+      L
Sbjct: 131 RRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRD-----RVPPTTFTFGVAARAL 185

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+ G  D+A  L   M      P+ V Y ++IH  C      EA  L  EM+  G   +V
Sbjct: 186 CRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADV 245

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT------------ 178
            +F+ ++  +C  G++ EA+RL++ M+  G  P    Y  L+ G C              
Sbjct: 246 NTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGR 305

Query: 179 -------------------GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
                              G++  A EL+ +M   GC+ +  +YSIL++G CK   I  A
Sbjct: 306 VPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSA 365

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L  EM  KG  P+VV Y  +     +    +    L +EM   G+  ++  Y   I  
Sbjct: 366 VRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYA 425

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           LCK+G + EA+ L + +R      DI +YN +I  LC + +++ A  +F +L    ++A+
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
            +TYN +IHAL  DG+   A  L  +M
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEM 512



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 149/327 (45%), Gaps = 41/327 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+  + + GC+P+  TY+ L++GLC+ G    A+ L  EM            PN V
Sbjct: 329 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG------FAPNVV 382

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++   CK G  D  + L  +M  + +  N   YN +I+  C     +EA  L  EM
Sbjct: 383 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 442

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT----------- 170
             QG  P++ S+N I+  LC N +M+EA  + E +++ GV  N   YNT           
Sbjct: 443 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 502

Query: 171 ------------------------LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                   L+   C  G V+R+  L   M   G K N  SY+IL
Sbjct: 503 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 562

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+  CK + +  AL L  +ML++G+ PD+V YNTL  GL ++  +  A  L +++    V
Sbjct: 563 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 622

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELF 293
             D   Y   I   CK   + +A  L 
Sbjct: 623 HPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 134/281 (47%), Gaps = 5/281 (1%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMNELCKNGKMDE 148
            + P+  +YN ++     A+   +A  L+  M+ +  V P   +F V    LC+ G+ DE
Sbjct: 134 GVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADE 193

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A  LL  M + G  P+A +Y T++   C  G V  A  L   M  MGC  +V ++  ++ 
Sbjct: 194 ALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVR 253

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
           G C    +  A  L   M++KG  P V+ Y  L  GL  + Q + A  +   +    V  
Sbjct: 254 GMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVV- 312

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
               + T I G    G + EA EL+ T+ +   + D   Y+ L+ GLCK GR+  A  L 
Sbjct: 313 ---LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLL 369

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R + +     +VVTY I++H+ C +G  D  R L  +M AK
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK 410



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 126/227 (55%), Gaps = 6/227 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++R  GC P++ +YNT+I  LC       A ++FE +     E GVV   N +
Sbjct: 434 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL----EEGVVA--NGI 487

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TII  L ++G    A  L  +M     + +VV+YN LI   C   + + +  L  EM
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++PN VS+N++++ELCK  ++ +A  L + M+  G+ P+   YNTL++G C  G +
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + A  L   + +     ++ +Y+ILI+ +CK + ++ A  L +  ++
Sbjct: 608 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 654


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/353 (32%), Positives = 191/353 (54%), Gaps = 7/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N +I+GL + G     L ++E M     E       +  TY+++I GLC  G V
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE------KDLYTYSSLIHGLCDAGNV 306

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKA+ +F ++ +   + +VVTYN+++ GFC      E+  L+  +M+     N+VS+N++
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNIL 365

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L +NGK+DEA+ +  LM   G   +   Y   + G C+ G VN+A  +   +ES G 
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V++Y+ +I+  CK K +E A +L  EM   G++ +  + N L  GL    ++  A  
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
              EM ++G      +Y   I GLCK G   EA    + +    ++ D++ Y+ L+ GLC
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  ++ +A EL+    +  L  DV+ +NI+IH LC+ GK+D A  +  +ME +
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/431 (29%), Positives = 205/431 (47%), Gaps = 67/431 (15%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFE----------------- 43
           +A  +F ++R +FGCEP + +YNTL+N        +   +LF                  
Sbjct: 96  QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155

Query: 44  -EMANGNGEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
            +M+    EF               KP+  +Y+T+I+ L K G +D A ELF +M +  +
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEAS 150
            P+V  YN LI GF    D   A  L+  ++ D  V PNV + N++++ L K G++D+  
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           ++ E M Q     + + Y++L+ G C  G V++AE +F  ++      +V +Y+ ++ G+
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  +I+ +L L+  M  K    ++V YN L  GL E  +++ A  ++  M   G AAD 
Sbjct: 336 CRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y  FI GLC NGY+ +A+ + + +      LD+ AY  +ID LCK  RL+ A  L + 
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454

Query: 331 LPR--------------GVLIAD---------------------VVTYNIMIHALCADGK 355
           + +              G LI D                     VV+YNI+I  LC  GK
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514

Query: 356 MDKARDLFLDM 366
             +A     +M
Sbjct: 515 FGEASAFVKEM 525



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 175/316 (55%), Gaps = 3/316 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEA 114
           CK +     ++I    K    D+A ++F +M++     P + +YN+L++ F  A  W + 
Sbjct: 74  CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           + LF      GV PN+ ++NV++   CK  + ++A   L+ M + G +P+ F Y+T+++ 
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIND 193

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKP 233
               G+++ A ELF  M   G   +V  Y+ILI+G+ K K+ + A+ L+  +L    + P
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP 253

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +V  +N +  GL +  +V+   K+++ M+++    D + Y + I GLC  G + +A  +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             L   K  +D+  YN ++ G C+ G++K + EL+R +     + ++V+YNI+I  L  +
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLEN 372

Query: 354 GKMDKARDLFLDMEAK 369
           GK+D+A  ++  M AK
Sbjct: 373 GKIDEATMIWRLMPAK 388



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/332 (30%), Positives = 177/332 (53%), Gaps = 7/332 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL++F+ M    G     C+P   +Y T+++   +     K + LF   +   + PN+ T
Sbjct: 97  ALDVFKRMREIFG-----CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           YN LI   C   ++ +A+     M  +G +P+V S++ ++N+L K GK+D+A  L + M 
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEI 216
           + GV P+   YN L+DGF        A EL+  + E      NV +++I+I+G  K   +
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +  L ++  M     + D+  Y++L  GL +   V++A  +F+E+     + D   Y T 
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           + G C+ G I E++EL+R +   K  ++I +YN LI GL ++G++  A  ++R +P    
Sbjct: 332 LGGFCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            AD  TY I IH LC +G ++KA  +  ++E+
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 176/364 (48%), Gaps = 7/364 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F +L       +V TYNT++ G CR G    +L L+  M + N         N V
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-------VNIV 360

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I GL + G +D+A  ++  M  +    +  TY   IHG C     N+A  +  E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   +V ++  I++ LCK  +++EAS L++ M + GV  N+ V N L+ G     R+
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A      M   GC+  V SY+ILI G CK  +   A +   EML  G KPD+  Y+ L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +++ A +L+ +  + G+  D   +   I GLC  G + +A+ +   +     
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  YN L++G  K G    A  ++  + +  L  D+++YN ++  LC    +  A +
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660

Query: 362 LFLD 365
            F D
Sbjct: 661 FFDD 664


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/400 (30%), Positives = 197/400 (49%), Gaps = 41/400 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L   +  F CEP+V+ YN LIN     G T  AL     M   NG     CKP+ +T
Sbjct: 297 AESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIK-NG-----CKPSLIT 350

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           ++TII   C EG V +A+++F  +++  ++PNV  YN+L+ G+  A D  +A  L+ EM 
Sbjct: 351 FSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMR 410

Query: 123 DQGVQPNVVSFNVI-----------------------------------MNELCKNGKMD 147
           D+G+ P+  +FN++                                   +  LC  G++D
Sbjct: 411 DKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLD 470

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA + LE M++ G+ P+   +N+++  +   G  + A + +  M   G   +  + S ++
Sbjct: 471 EAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSML 530

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G  K   ++ A  L  +M+ KG+  + V +  L  G F++     A  L+ EM+  G+ 
Sbjct: 531 LGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGIC 590

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D  A+  FIDGL K G + EA E F  +    +  +   YN LI GLC  G+L  A +L
Sbjct: 591 PDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKL 650

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            R + +  L+ D+ T NI+I+  C +G+M  A D F +M 
Sbjct: 651 EREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMH 690



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/391 (28%), Positives = 191/391 (48%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+P++ T++T+I   C  G+ + A  +FE    G  E G+   PN   Y T++ G  K 
Sbjct: 343 GCKPSLITFSTIITAFCNEGNVVEARKIFE----GIQEVGL--SPNVAMYNTLMSGYFKA 396

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHG----------------------------- 104
             V +A  L+ +M+D+ I P+  T+N L+ G                             
Sbjct: 397 RDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLY 456

Query: 105 ------FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                  C+A   +EA     +M+++G+ P+VV+FN ++    + G  D A +  ++M+ 
Sbjct: 457 DVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLM 516

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ P++   ++++ G    GR+  A +L   M   G   N  ++++L++GY K  +  G
Sbjct: 517 FGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAG 576

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A SL+ EM ++GI PD + ++    GL +   VE A++ F EM + G   + + Y + I 
Sbjct: 577 AHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIH 636

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           GLC  G + EA++L R +R      DI   N +I+G CK GR+K A++ F  +    +  
Sbjct: 637 GLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTP 696

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D VTYN +I   C    M  A +    M A 
Sbjct: 697 DTVTYNTLIGGYCKVLDMVSADEFLNKMYAS 727



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 102/346 (29%), Positives = 176/346 (50%), Gaps = 7/346 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V  +N++I    R G    A   ++ M      FG+V  P++ T ++++ GL K+
Sbjct: 483 GMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIML----MFGLV--PSSSTCSSMLLGLSKK 536

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A++L  KM D+ +  N V +  L+ G+    D   A  L+ EM  +G+ P+ ++F
Sbjct: 537 GRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAF 596

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +  ++ L K G ++EA      M + G  PN FVYN+L+ G C  G+++ A +L   M  
Sbjct: 597 SAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQ 656

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   ++F+ +I+ING+CK   ++ A   ++EM   G+ PD V YNTL  G  ++  +  
Sbjct: 657 KGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVS 716

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +  ++M   G   D   Y   I G C +  I  AV +   L  +    +   YN +++
Sbjct: 717 ADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMN 776

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +C +  L  A  L   L +   + +VVT N+++   C  G  +KA
Sbjct: 777 AVC-TDMLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 167/354 (47%), Gaps = 7/354 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF    +    P+   Y+  + GLC  G    A+   E+M     E G+   P+ V + +
Sbjct: 440 LFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDML----EKGM--PPSVVAFNS 493

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I    + GF D A + +  M    + P+  T +S++ G        EA+ L  +M+D+G
Sbjct: 494 VIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKG 553

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +  N V+F V+++   K G    A  L   M   G+ P+A  ++  +DG    G V  A 
Sbjct: 554 LPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAY 613

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E F  M   G   N F Y+ LI+G C   ++  AL L  EM  KG+ PD+   N +  G 
Sbjct: 614 EAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIIINGF 673

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +++ AF  F EM   GV  DT  Y T I G CK   +V A E    +    ++ DI
Sbjct: 674 CKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDI 733

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             YN  I G C S ++  A  +   L    ++ + VTYN M++A+C D  +D+A
Sbjct: 734 TTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRA 786



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 160/351 (45%), Gaps = 6/351 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E +    NTL+ G   +     +L +   M     E GV  +P++   + +   L + G 
Sbjct: 205 ESDFSILNTLMRGFMNSEMAYESLEILSRMR----EVGV--RPSSSAISILFRLLLRVGD 258

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
                +L   M  +   P    +N +I  FC       A+ L   M     +P+V ++N+
Sbjct: 259 YGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNI 318

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N     G+  +A   L LMI+ G +P+   ++T++  FC  G V  A ++F  ++ +G
Sbjct: 319 LINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVG 378

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV  Y+ L++GY K +++  A  LY EM  KGI PD   +N L  G ++  +   ++
Sbjct: 379 LSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSY 438

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +LF +     +  D   Y   + GLC  G + EA++    +        + A+N +I   
Sbjct: 439 ELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAY 498

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            ++G    A + ++ +    L+    T + M+  L   G++ +ARDL   M
Sbjct: 499 SRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKM 549



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/438 (22%), Positives = 175/438 (39%), Gaps = 76/438 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  +  ++R  G  P+    + L   L R G       L   M           +P   
Sbjct: 226 ESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGP------RPCNH 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I   C++G++  A+ L   M      P+V  YN LI+ +      ++A      M
Sbjct: 280 NFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G +P++++F+ I+   C  G + EA ++ E + ++G+ PN  +YNTLM G+     V
Sbjct: 340 IKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDV 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSIL----------------------------------- 206
            +A  L+  M   G   +  +++IL                                   
Sbjct: 400 CQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVS 459

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + G C   +++ A+    +ML KG+ P VV +N++          + A K +  M   G+
Sbjct: 460 VAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGL 519

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTL----------------------------RI 298
              +    + + GL K G + EA +L   +                              
Sbjct: 520 VPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHS 579

Query: 299 LKYELDIR-------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L YE++ R       A++  IDGL K+G ++ A+E F  + +   + +   YN +IH LC
Sbjct: 580 LWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLC 639

Query: 352 ADGKMDKARDLFLDMEAK 369
             GK+ +A  L  +M  K
Sbjct: 640 NCGKLHEALKLEREMRQK 657



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 128/271 (47%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           N+L+ GF  +    E+  +   M + GV+P+  + +++   L + G      +LL  MI+
Sbjct: 212 NTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIR 271

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G RP    +N ++  FC  G +  AE L   M    C+ +V++Y+ILIN Y        
Sbjct: 272 DGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSD 331

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL     M+  G KP ++ ++T+         V  A K+F+ +Q  G++ +   Y T + 
Sbjct: 332 ALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMS 391

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G  K   + +A  L+  +R      D   +N L+ G  K G+   ++ELFR      L+ 
Sbjct: 392 GYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSLVP 451

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D   Y++ +  LC  G++D+A     DM  K
Sbjct: 452 DCSLYDVSVAGLCWAGQLDEAMQFLEDMLEK 482



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 95/183 (51%), Gaps = 7/183 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++R  G  P++FT N +ING C+ G    A + F EM +     GV   P+TV
Sbjct: 646 EALKLEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHH----IGVT--PDTV 699

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I G CK   +  A E   KM     +P++ TYN  I GFC +   + A  +  E+
Sbjct: 700 TYNTLIGGYCKVLDMVSADEFLNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTMLDEL 759

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV PN V++N +MN +C +  +D A  L   ++++   PN    N L+  FC  G  
Sbjct: 760 IAVGVVPNTVTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMP 818

Query: 182 NRA 184
            +A
Sbjct: 819 EKA 821


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  194 bits (494), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 186/350 (53%), Gaps = 8/350 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C+P V TY  LI      G    A+ L +EM   N       +P+  TY +II G+C+EG
Sbjct: 192 CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN------LQPDMFTYNSIIRGMCREG 245

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           +VD+A ++   +  +   P+V+TYN L+ G      W     L  +M+ +G + NVV+++
Sbjct: 246 YVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYS 305

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           V+++ +C++GK++E   LL+ M + G++P+ + Y+ L+   C  GRV+ A E+   M S 
Sbjct: 306 VLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISD 365

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+ ++   CK K  + ALS++ ++   G  P+   YN++F  L+      RA
Sbjct: 366 GCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRA 425

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLI 312
             +  EM   GV  D   Y + I  LC++G + EA+EL   + +   E    + +YN ++
Sbjct: 426 LGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVL 485

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            GLCK  R+  A E+  ++       +  TY  +I  +   G ++ ARDL
Sbjct: 486 LGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 176/353 (49%), Gaps = 8/353 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P++  YN +I G CR      A  + + M N          P+ VTY  +I  LC  G 
Sbjct: 123 HPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKG------FSPDIVTYNILIGSLCSRGM 176

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A E   ++  EN  P VVTY  LI         +EA  L  EM++  +QP++ ++N 
Sbjct: 177 LDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNS 236

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I+  +C+ G +D A +++  +   G  P+   YN L+ G    G+     EL   M + G
Sbjct: 237 IIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARG 296

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+ NV +YS+LI+  C++ ++E  + L  +M  KG+KPD   Y+ L   L +  +V+ A 
Sbjct: 297 CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAI 356

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           ++ D M   G   D   Y T +  LCK     EA+ +F  L  +    +  +YN +   L
Sbjct: 357 EVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSAL 416

Query: 316 CKSG-RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             +G +++    +   L +GV   D +TYN +I  LC DG +D+A +L +DME
Sbjct: 417 WSTGHKVRALGMILEMLDKGV-DPDGITYNSLISCLCRDGMVDEAIELLVDME 468



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 161/307 (52%), Gaps = 1/307 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           KP+ V  T +I GL     +DKA ++   +++   +P+++ YN++I GFC AN  + A  
Sbjct: 89  KPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGFCRANRIDSAYQ 147

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +   M ++G  P++V++N+++  LC  G +D A      +++   +P    Y  L++   
Sbjct: 148 VLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATL 207

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           L G ++ A +L   M  +  + ++F+Y+ +I G C+   ++ A  + S + SKG  PDV+
Sbjct: 208 LQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVI 267

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN L  GL    + E  ++L  +M   G  A+   Y   I  +C++G + E V L + +
Sbjct: 268 TYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDM 327

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +    + D   Y+ LI  LCK GR+ +A E+   +     + D+V YN ++  LC   + 
Sbjct: 328 KKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRA 387

Query: 357 DKARDLF 363
           D+A  +F
Sbjct: 388 DEALSIF 394



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 141/264 (53%), Gaps = 1/264 (0%)

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C A ++NE+      ++++G +P+VV    +++ L  +  +D+A +++ ++   G  P+ 
Sbjct: 68  CKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDL 126

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             YN ++ GFC   R++ A ++   M++ G   ++ +Y+ILI   C    ++ AL   ++
Sbjct: 127 IAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQ 186

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           +L +  KP VV Y  L         ++ A KL DEM    +  D + Y + I G+C+ GY
Sbjct: 187 LLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGY 246

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           +  A ++  ++    Y  D+  YN L+ GL   G+ +  +EL   +      A+VVTY++
Sbjct: 247 VDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSV 306

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
           +I ++C DGK+++   L  DM+ K
Sbjct: 307 LISSVCRDGKVEEGVGLLKDMKKK 330



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 153/326 (46%), Gaps = 31/326 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA  L  ++     +P++FTYN++I G+CR G+   A  +   +++              
Sbjct: 214 EAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILL 273

Query: 48  ------GNGEFGVV---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                 G  E G           C+ N VTY+ +I  +C++G V++   L   MK + + 
Sbjct: 274 RGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLK 333

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+   Y+ LI   C     + A  +   M+  G  P++V++N I+  LCK  + DEA  +
Sbjct: 334 PDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSI 393

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E + ++G  PNA  YN++      TG   RA  + + M   G   +  +Y+ LI+  C+
Sbjct: 394 FEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCR 453

Query: 213 NKEIEGALSLYS--EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           +  ++ A+ L    EM S   KP VV YN + +GL ++ +V  A ++   M   G   + 
Sbjct: 454 DGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNE 513

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTL 296
             Y   I+G+   G + +A +L  TL
Sbjct: 514 TTYTFLIEGIGFGGCLNDARDLATTL 539



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 9/201 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++  YNT++  LC+      AL++FE++    GE G  C PN  +Y ++   L   
Sbjct: 366 GCVPDIVNYNTILACLCKQKRADEALSIFEKL----GEVG--CSPNASSYNSMFSALWST 419

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI--EMMDQGVQPNVV 131
           G   +A  + L+M D+ ++P+ +TYNSLI   C     +EA  L +  EM     +P+VV
Sbjct: 420 GHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVV 479

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           S+N+++  LCK  ++ +A  +L  M+  G RPN   Y  L++G    G +N A +L  ++
Sbjct: 480 SYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTL 539

Query: 192 ESMGCKHNVFSYSILINGYCK 212
            +M       S+  L   +CK
Sbjct: 540 VNMDAISE-HSFERLYKTFCK 559



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 92/160 (57%), Gaps = 8/160 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++F KL   GC PN  +YN++ + L  TGH + AL +  EM +     GV   P+ +
Sbjct: 389 EALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDK----GV--DPDGI 442

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TY ++I  LC++G VD+A EL + M+ E+    P+VV+YN ++ G C  +  ++A  +  
Sbjct: 443 TYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLA 502

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            M+D+G +PN  ++  ++  +   G +++A  L   ++ +
Sbjct: 503 AMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNM 542



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A  + +++   G +P+  TYN+LI+ LCR G    A+ L  +M   + E    CKP+ 
Sbjct: 423 VRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSE----CKPSV 478

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y  ++ GLCK   V  A E+   M D+   PN  TY  LI G  +    N+A+ L   
Sbjct: 479 VSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATT 538

Query: 121 MMD 123
           +++
Sbjct: 539 LVN 541


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 179/363 (49%), Gaps = 9/363 (2%)

Query: 10  LRVF---GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           LRV    G  PN  TY+ ++  LC  G    A+ +              C P+ VT T +
Sbjct: 169 LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSK------CYPDVVTCTVL 222

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           ID  CKE  V +A +LF +M+++   P+VVTYN LI GFC     +EA     ++   G 
Sbjct: 223 IDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGC 282

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           QP+V+S N+I+  LC  G+  +A +LL  M++ G  P+   +N L++  C  G + +A  
Sbjct: 283 QPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALN 342

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +   M   G   N  S++ LI G+C  K I+ A+     M+S+G  PD+V YN L   L 
Sbjct: 343 VLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALC 402

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  +V+ A  +  ++   G +    +Y T IDGL K G    AVEL   +     + D+ 
Sbjct: 403 KDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLI 462

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               ++ GL + G+++ A + F  L R  +  +   YN +I  LC   +   A D   DM
Sbjct: 463 TCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADM 522

Query: 367 EAK 369
            AK
Sbjct: 523 VAK 525



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/341 (29%), Positives = 167/341 (48%), Gaps = 7/341 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++R  GC+P+V TYN LI G C+ G    A+   +++ +    +G  C+P+ +
Sbjct: 234 QAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPS----YG--CQPDVI 287

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++  I+  LC  G    A +L   M  +   P+VVT+N LI+  C      +A  +   M
Sbjct: 288 SHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMM 347

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PN  SFN ++   C    +D A   LE+M+  G  P+   YN L+   C  G+V
Sbjct: 348 PKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKV 407

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   + S GC  ++ SY+ +I+G  K  + E A+ L  EM  KG+KPD++   ++
Sbjct: 408 DDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSV 467

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +V  A K F  ++R  +  + + Y + I GLCK+     A++    +     
Sbjct: 468 VGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGC 527

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVV 341
           +     Y  LI G+   G  + A +L   L  RG++   +V
Sbjct: 528 KPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKRSLV 568



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 89/313 (28%), Positives = 157/313 (50%), Gaps = 5/313 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ +  T +I   CK G    A ++   +++     +V +YN LI G+C + +  EA   
Sbjct: 112 PDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA--- 168

Query: 118 FIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            + ++D+ GV PN  +++ ++  LC  GK+ +A ++L   +Q    P+      L+D  C
Sbjct: 169 -LRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATC 227

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
               V +A +LF  M + GCK +V +Y++LI G+CK   ++ A+    ++ S G +PDV+
Sbjct: 228 KESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVI 287

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N +   L    +   A KL   M R G       +   I+ LC+ G + +A+ +   +
Sbjct: 288 SHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMM 347

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               +  + R++N LI G C    +  A E    +       D+VTYNI++ ALC DGK+
Sbjct: 348 PKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKV 407

Query: 357 DKARDLFLDMEAK 369
           D A  +   + +K
Sbjct: 408 DDAVVILSQLSSK 420



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/278 (29%), Positives = 140/278 (50%), Gaps = 6/278 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  L   +   GC P+V T+N LIN LC+ G    ALN+ E M   +G       PN+
Sbjct: 303 MDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPK-HGH-----TPNS 356

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            ++  +I G C    +D+A E    M      P++VTYN L+   C     ++A  +  +
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G  P+++S+N +++ L K GK + A  LLE M   G++P+     +++ G    G+
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A + F  ++    + N F Y+ +I G CK+++   A+   ++M++KG KP    Y T
Sbjct: 477 VREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTT 536

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           L  G+      E A KL +E+   G+   +   +  ++
Sbjct: 537 LIKGITYEGLAEDASKLSNELYSRGLVKRSLVEKVSLE 574



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 117/233 (50%), Gaps = 3/233 (1%)

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L +NG+++E SR LE M   G  P+      L+  FC  GR   A ++   +E  G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V SY++LI+GYCK+ EIE AL +   M   G+ P+   Y+ +   L +  ++++A +
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +     +     D       ID  CK   + +A++LF  +R    + D+  YN LI G C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K GRL  A    + LP      DV+++N+++ +LC+ G+   A  L   M  K
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRK 315



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 128/253 (50%), Gaps = 5/253 (1%)

Query: 118 FIE-MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           F+E M ++G  P+V++   ++ E CK G+   AS+++ ++ + G   +   YN L+ G+C
Sbjct: 101 FLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYC 160

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            +G +   EE    ++ MG   N  +Y  ++   C   +++ A+ +    L     PDVV
Sbjct: 161 KSGEI---EEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVV 217

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
               L     +   V +A KLF+EM+  G   D   Y   I G CK G + EA+   + L
Sbjct: 218 TCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKL 277

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D+ ++N ++  LC  GR   A +L  ++ R   +  VVT+NI+I+ LC  G +
Sbjct: 278 PSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLL 337

Query: 357 DKARDLFLDMEAK 369
            KA ++ L+M  K
Sbjct: 338 GKALNV-LEMMPK 349


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  194 bits (494), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 174/350 (49%), Gaps = 9/350 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ +TY  LI  LC  G    AL+L ++M          C+PN VTYT +++ +CK    
Sbjct: 140 PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRG------CQPNVVTYTVLLEAMCKNSGF 193

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A  +  +M+ +   PN+VTYN +I+G C     ++A+ L   +   G QP+ VS+  +
Sbjct: 194 EQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTL 253

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC + + D+   L   M++    PN   ++ L+  FC  G V RA ++   M    C
Sbjct: 254 LKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHEC 313

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N    +I+IN  CK   ++ A    + M S G  PD + Y T+  GL    +   A +
Sbjct: 314 ATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKE 373

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  EM R+    +   + TFI  LC+ G I +A+ L   ++     + +  YN L++G C
Sbjct: 374 LLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFC 433

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             G +  A ELFRS+P      + +TY  ++  LC   ++D A +L  +M
Sbjct: 434 VQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEM 480



 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 186/397 (46%), Gaps = 44/397 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+  ++R  GC PN+ TYN +ING+CR G    A +L   +      F   C+P+TV
Sbjct: 195 QAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRL------FSYGCQPDTV 248

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YTT++ GLC     D  +ELF +M ++N  PN VT++ LI  FC       A  +  +M
Sbjct: 249 SYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQM 308

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +     N    N+++N +CK G++D+A + L  M   G  P+   Y T++ G C   R 
Sbjct: 309 TEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERW 368

Query: 182 NRAEELFV-----------------------------------SMESMGCKHNVFSYSIL 206
           N A+EL                                      M+  GC   V +Y+ L
Sbjct: 369 NDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNAL 428

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +NG+C    I+ AL L+  M     KP+ + Y TL  GL    +++ A +L  EM     
Sbjct: 429 VNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDC 485

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             +   +   ++  C+ G++ EA+EL   +       ++  YN L DG+ K    + A E
Sbjct: 486 PPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALE 545

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L   L    +  DV+T++ +I  L  + ++++A  +F
Sbjct: 546 LLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMF 582



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 176/361 (48%), Gaps = 9/361 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  ++    C  N    N +IN +C+ G    A      M    G +G  C P+T++
Sbjct: 301 AIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNM----GSYG--CNPDTIS 354

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT++ GLC+    + AKEL  +M   N  PN VT+N+ I   C      +A  L  +M 
Sbjct: 355 YTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ 414

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G    VV++N ++N  C  G +D A   LEL   +  +PN   Y TL+ G C   R++
Sbjct: 415 EHGCTVGVVTYNALVNGFCVQGHIDSA---LELFRSMPCKPNTITYTTLLTGLCNAERLD 471

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M    C  NV ++++L+N +C+   ++ A+ L  +M+  G  P+++ YNTLF
Sbjct: 472 AAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLF 531

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G+ +    E A +L   +   GV+ D   + + I  L K   + EA+++F   + +   
Sbjct: 532 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMR 591

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                YN ++ GLCK   +  A +    +     + +  TY I+I  L  +G + +A+DL
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDL 651

Query: 363 F 363
            
Sbjct: 652 L 652



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 172/354 (48%), Gaps = 9/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V+    LI  LCR G T  A  +    A G+G        +   Y T++ G C+ 
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRA-AEGSGS-----PVDVFAYNTLVAGYCRY 123

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A+ L   M    + P+  TY  LI   C      +A  L  +M+ +G QPNVV++
Sbjct: 124 GHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTY 180

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            V++  +CKN   ++A  +L+ M   G  PN   YN +++G C  GRV+ A +L   + S
Sbjct: 181 TVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFS 240

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC+ +  SY+ L+ G C +K  +    L++EM+ K   P+ V ++ L         VER
Sbjct: 241 YGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVER 300

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++  +M  H  A +T      I+ +CK G + +A +    +       D  +Y  ++ 
Sbjct: 301 AIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLK 360

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GLC++ R   A EL + + R     + VT+N  I  LC  G +++A  L   M+
Sbjct: 361 GLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ 414



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 148/295 (50%), Gaps = 9/295 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++    C PN  T+NT I  LC+ G    A+ L E+M       GVV      
Sbjct: 370 DAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVV------ 423

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++G C +G +D A ELF  M      PN +TY +L+ G C A   + A  L  EM
Sbjct: 424 TYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDAAAELVAEM 480

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PNVV+FNV++N  C+ G +DEA  L+E M++ G  PN   YNTL DG       
Sbjct: 481 LHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSS 540

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   + S G   +V ++S +I    K   +E A+ ++      G++P  ++YN +
Sbjct: 541 EDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKI 600

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +GL + H+++ A      M  +G   +   Y   I+GL + G + EA +L   L
Sbjct: 601 LLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSML 655



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 137/267 (51%), Gaps = 9/267 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  GC   V TYN L+NG C  GH   AL LF  M          CKPNT+
Sbjct: 405 QAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---------CKPNTI 455

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ GLC    +D A EL  +M   +  PNVVT+N L++ FC     +EA  L  +M
Sbjct: 456 TYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQM 515

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G  PN++++N + + + K+   ++A  LL  ++  GV P+   +++++       RV
Sbjct: 516 MEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRV 575

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F   + +G +     Y+ ++ G CK  EI+ A+   + M+S G  P+   Y  L
Sbjct: 576 EEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIIL 635

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA 268
             GL     ++ A  L   +   GV +
Sbjct: 636 IEGLAREGLLKEAQDLLSMLCSRGVVS 662



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 4/157 (2%)

Query: 214 KEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           +++ GA  L     S+ G  PDV +   L   L    +   A ++    +  G   D +A
Sbjct: 53  EDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFA 112

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y T + G C+ G++  A  L  ++ +     D   Y  LI  LC  GR+  A  L   + 
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIGSMPVAP---DAYTYTPLIRVLCDRGRVADALSLLDDML 169

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R     +VVTY +++ A+C +   ++A  +  +M AK
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAK 206


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 201/429 (46%), Gaps = 68/429 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   GC+PN FT+  L+ G C+ G T   L L   M +    FGV+  PN V 
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMES----FGVL--PNKVV 219

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM- 121
           Y TI+   C+EG  D +++L  KM++E + P++VT+NS I   C      +A  +F +M 
Sbjct: 220 YNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279

Query: 122 MDQGV---QPNVVSFNVIMNELCK-----------------------------------N 143
           +D+ +   +PN +++N+++   CK                                   +
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRH 339

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           GK  EA  +L+ MI  G+ P+ + YN LMDG C  G ++ A+ +   M+  G   +  +Y
Sbjct: 340 GKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTY 399

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
             L++GYC   +++ A SL  EM+     P+    N L   L+ + ++  A +L  +M  
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNE 459

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL-------------------- 303
            G   DT      +DGLC +G + +A+E+ + +R+                         
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519

Query: 304 ---DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+  Y+ L++GLCK+GR   A  LF  +    L  D + YNI IH  C  GK+  A 
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAF 579

Query: 361 DLFLDMEAK 369
            +  DME K
Sbjct: 580 RVLKDMEKK 588



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 198/423 (46%), Gaps = 68/423 (16%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+  + + G  P  +T+N LI  LC +     A  LF+EM          CKPN  T+  
Sbjct: 134 LYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKG------CKPNEFTFGI 187

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ G CK G  DK  EL   M+   + PN V YN+++  FC     ++++ L  +M ++G
Sbjct: 188 LVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEG 247

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRL---LELMIQIGV-RPNAFVYNTLMDGFCLTGRV 181
           + P++V+FN  ++ LCK GK+ +ASR+   +EL   +G+ RPN+  YN ++ GFC  G +
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307

Query: 182 NRAEELF---------VSMES--------------------------MGCKHNVFSYSIL 206
             A+ LF         VS++S                           G   +++SY+IL
Sbjct: 308 EDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNIL 367

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CK   +  A ++   M   G+ PD V Y  L  G   + +V+ A  L  EM R+  
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             + +     +  L   G I EA EL R +    Y LD    N ++DGLC SG L  A E
Sbjct: 428 LPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487

Query: 327 LFR-----------------------SLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           + +                       SL     + D++TY+ +++ LC  G+  +A+ LF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLF 547

Query: 364 LDM 366
            +M
Sbjct: 548 AEM 550



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 201/426 (47%), Gaps = 60/426 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  L  K+R  G  P++ T+N+ I+ LC+ G  + A  +F +M     E+  + +PN++
Sbjct: 235 DSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD--EYLGLPRPNSI 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G CK G ++ AK LF  +++ +   ++ +YN  + G      + EA+ +  +M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ P++ S+N++M+ LCK G + +A  ++ LM + GV P+A  Y  L+ G+C  G+V
Sbjct: 353 IDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKV 412

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ L   M    C  N ++ +IL++       I  A  L  +M  KG   D V  N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA-----------------------DTWAYRTFID 278
             GL    ++++A ++   M+ HG AA                       D   Y T ++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW------------- 325
           GLCK G   EA  LF  +   K + D  AYN  I   CK G++  A+             
Sbjct: 533 GLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592

Query: 326 --ELFRSLPRGVLI--------------------ADVVTYNIMIHALCADGKMDKARDLF 363
             E + SL  G+ I                     ++ TYN  I  LC  GK++ A +L 
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLL 652

Query: 364 LDMEAK 369
            +M  K
Sbjct: 653 DEMMQK 658



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 180/386 (46%), Gaps = 31/386 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNT 60
           +A  LF  +R      ++ +YN  + GL R G  I A  + ++M + G G       P+ 
Sbjct: 309 DAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIG-------PSI 361

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++DGLCK G +  AK +   MK   ++P+ VTY  L+HG+C     + AK L  E
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM     PN  + N++++ L   G++ EA  LL  M + G   +    N ++DG C +G 
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481

Query: 181 VNRAEELFVSMESMG-----------------------CKHNVFSYSILINGYCKNKEIE 217
           +++A E+   M   G                       C  ++ +YS L+NG CK     
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A +L++EM+ + ++PD + YN       +  ++  AF++  +M++ G       Y + I
Sbjct: 542 EAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            GL     I E   L   +R      +I  YN  I  LC+ G+++ A  L   + +  + 
Sbjct: 602 LGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIA 661

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
            +V ++  +I A C     D A+++F
Sbjct: 662 PNVFSFKYLIGAFCKVPDFDMAQEVF 687



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 161/314 (51%), Gaps = 4/314 (1%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           KP    Y  +++   +E  V+    L+  M    I+P   T+N LI   C ++  + A+ 
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM ++G +PN  +F +++   CK G  D+   LL  M   GV PN  VYNT++  FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGI---K 232
             GR + +E+L   M   G   ++ +++  I+  CK  ++  A  ++S+M L + +   +
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P+ + YN +  G  ++  +E A  LF+ ++ +       +Y  ++ GL ++G  +EA  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
            + +        I +YN L+DGLCK G L  A  +   + R  +  D VTY  ++H  C+
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 353 DGKMDKARDLFLDM 366
            GK+D A+ L  +M
Sbjct: 409 VGKVDAAKSLLQEM 422



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 182/386 (47%), Gaps = 30/386 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++   G  P++++YN L++GLC+ G    A  +   M   NG       P+ 
Sbjct: 343 IEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR-NG-----VSPDA 396

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  ++ G C  G VD AK L  +M   N  PN  T N L+H        +EA+ L  +
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRK 456

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM-----------------------I 157
           M ++G   + V+ N+I++ LC +G++D+A  +++ M                       I
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +    P+   Y+TL++G C  GR   A+ LF  M     + +  +Y+I I+ +CK  +I 
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKIS 576

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +  +M  KG    +  YN+L +GL   +Q+     L DEM+  G++ +   Y T I
Sbjct: 577 SAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAI 636

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             LC+ G + +A  L   +       ++ ++  LI   CK     +A E+F +    +  
Sbjct: 637 QYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFET-AVSICG 695

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
                Y++M + L A G++ KA +L 
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELL 721



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 167/350 (47%), Gaps = 40/350 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++    C PN +T N L++ L   G    A  L  +M N  G +G+    +TVT
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKM-NEKG-YGL----DTVT 468

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMK-----------------------DENINPNVVTYN 99
              I+DGLC  G +DKA E+   M+                       + N  P+++TY+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           +L++G C A  + EAK LF EMM + +QP+ +++N+ ++  CK GK+  A R+L+ M + 
Sbjct: 529 TLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G   +   YN+L+ G  +  ++     L   M   G   N+ +Y+  I   C+  ++E A
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKVEDA 648

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM-----QRHGVAADTWAYR 274
            +L  EM+ K I P+V  +  L     ++   + A ++F+       Q+ G+      Y 
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGL------YS 702

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
              + L   G +++A EL   +    +EL    Y  L+  LCK   L++A
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVA 752



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 130/281 (46%), Gaps = 40/281 (14%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P++ TY+TL+NGLC+ G    A  LF EM       G   +P+++ Y   I   CK+G
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKTLFAEM------MGEKLQPDSLAYNIFIHHFCKQG 573

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +  A  +   M+ +  + ++ TYNSLI G    N   E   L  EM ++G+ PN+ ++N
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYN 633

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
             +  LC+ GK+++A+ LL+ M+Q  + PN F +  L+  FC     + A+E+F +  S+
Sbjct: 634 TAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSI 693

Query: 195 -GCKHNVFS---------------------------------YSILINGYCKNKEIEGAL 220
            G K  ++S                                 Y  L+   CK  E+E A 
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVAS 753

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +  +M+ KG   D      +  GL ++   + A    ++M
Sbjct: 754 GILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKM 794



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 85/171 (49%)

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K  ++ Y++L+    + + +E    LY +M+  GI P+   +N L   L +   V+ A +
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LFDEM   G   + + +   + G CK G   + +EL  ++       +   YN ++   C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + GR   + +L   +    L+ D+VT+N  I ALC +GK+  A  +F DME
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 43/219 (19%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC  ++ TYN+LI GL           L +EM     E G+   PN  TY T I  LC+ 
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMR----EKGI--SPNICTYNTAIQYLCEG 642

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI-------------- 119
           G V+ A  L  +M  +NI PNV ++  LI  FC   D++ A+ +F               
Sbjct: 643 GKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEGLYS 702

Query: 120 --------------------EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
                                ++D+G +     +  ++  LCK  +++ AS +L  MI  
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDK 762

Query: 160 GVRPNAFVYNTLMDGFCLTG---RVNRAEELFVSMESMG 195
           G   +      ++DG    G     N   E  + M S+G
Sbjct: 763 GYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVG 801



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 49/137 (35%), Gaps = 35/137 (25%)

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
           KP + +YN L        +VE    L+ +M   G++ +T+ +                  
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTF------------------ 150

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
                            N LI  LC S  +  A ELF  +P      +  T+ I++   C
Sbjct: 151 -----------------NLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193

Query: 352 ADGKMDKARDLFLDMEA 368
             G  DK  +L   ME+
Sbjct: 194 KAGLTDKGLELLNSMES 210


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  194 bits (493), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 181/362 (50%), Gaps = 10/362 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L  ++   GC P V TY  L+ GLCR            +        G V + N V
Sbjct: 247 EAARLVDRMMTKGCMPGVMTYGFLLQGLCR----------VRQADEARAMLGRVPELNVV 296

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + T+I G   EG + +A EL+  M  +   P+  TY+ L+HG C       A  L  EM
Sbjct: 297 LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREM 356

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PNVV++ ++++  CKNG  D+   LLE M   G+  N+  YN ++   C  GR+
Sbjct: 357 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 416

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   M S GC  ++ SY+ +I   C N+++E A  ++  +L +G+  + + YNT+
Sbjct: 417 DEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTI 476

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    + + A +L  EM  HG + D  +Y   I  +CK+G +  ++ L   +     
Sbjct: 477 IHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGI 536

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + +  +YN LI  LCK  R++ A EL + +    L  D+VTYN +I+ LC  G M  A +
Sbjct: 537 KPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALN 596

Query: 362 LF 363
           L 
Sbjct: 597 LL 598



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 177/368 (48%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL   +   GC P+   Y T+I+ LC  G    A  L  EM        + C  +  
Sbjct: 177 EALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEM------LLMGCAADVN 230

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ G+C  G V +A  L  +M  +   P V+TY  L+ G C     +EA+     M
Sbjct: 231 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA----M 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV FN ++      GK+ EA+ L E M   G +P+A  Y+ LM G C  GR+
Sbjct: 287 LGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRI 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   ME  G   NV +Y+I+++ +CKN   +   +L  EM +KG+  +   YN +
Sbjct: 347 GSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGM 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +++ A  L  EM+  G   D  +Y T I  LC N  + EA  +F  L     
Sbjct: 407 IYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGV 466

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN +I  L + GR + A  L + +       DVV+YN +I A+C DG +D++  
Sbjct: 467 VANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLV 526

Query: 362 LFLDMEAK 369
           L  +M  K
Sbjct: 527 LLEEMAEK 534



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 174/351 (49%), Gaps = 10/351 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P  FT+      LCR G    AL L   MA         C P+ V Y T+I  LC +G 
Sbjct: 156 PPTTFTFGVAARALCRLGRADEALALLRGMARHG------CVPDAVLYQTVIHALCDQGG 209

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V +A  L  +M       +V T++ ++ G C      EA  L   MM +G  P V+++  
Sbjct: 210 VTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGF 269

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC+  + DEA  +L  + ++    N  ++NT++ G    G++  A EL+ +M   G
Sbjct: 270 LLQGLCRVRQADEARAMLGRVPEL----NVVLFNTVIGGCLAEGKLAEATELYETMGLKG 325

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+ +  +YSIL++G CK   I  A+ L  EM  KG  P+VV Y  +     +    +   
Sbjct: 326 CQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTR 385

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L +EM   G+  ++  Y   I  LCK+G + EA+ L + +R      DI +YN +I  L
Sbjct: 386 ALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHL 445

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C + +++ A  +F +L    ++A+ +TYN +IHAL  DG+   A  L  +M
Sbjct: 446 CNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEM 496



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/327 (30%), Positives = 149/327 (45%), Gaps = 41/327 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+  + + GC+P+  TY+ L++GLC+ G    A+ L  EM            PN V
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKG------FAPNVV 366

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++   CK G  D  + L  +M  + +  N   YN +I+  C     +EA  L  EM
Sbjct: 367 TYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEM 426

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT----------- 170
             QG  P++ S+N I+  LC N +M+EA  + E +++ GV  N   YNT           
Sbjct: 427 RSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRW 486

Query: 171 ------------------------LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                   L+   C  G V+R+  L   M   G K N  SY+IL
Sbjct: 487 QDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNIL 546

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+  CK + +  AL L  +ML++G+ PD+V YNTL  GL ++  +  A  L +++    V
Sbjct: 547 ISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENV 606

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELF 293
             D   Y   I   CK   + +A  L 
Sbjct: 607 HPDIITYNILISWHCKVRLLDDAAMLL 633



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 4/244 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P   +F V    LC+ G+ DEA  LL  M + G  P+A +Y T++   C  G V  A 
Sbjct: 155 VPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAA 214

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M  MGC  +V ++  ++ G C    +  A  L   M++KG  P V+ Y  L  GL
Sbjct: 215 TLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGL 274

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             + Q + A  +   +    V      + T I G    G + EA EL+ T+ +   + D 
Sbjct: 275 CRVRQADEARAMLGRVPELNVV----LFNTVIGGCLAEGKLAEATELYETMGLKGCQPDA 330

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y+ L+ GLCK GR+  A  L R + +     +VVTY I++H+ C +G  D  R L  +
Sbjct: 331 HTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEE 390

Query: 366 MEAK 369
           M AK
Sbjct: 391 MSAK 394



 Score =  133 bits (334), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 141/301 (46%), Gaps = 7/301 (2%)

Query: 72  KEGFVDKAKE--LFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            +G + +A+   L+ +M   + + P   T+       C     +EA  L   M   G  P
Sbjct: 133 SQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 192

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           + V +  +++ LC  G + EA+ LL  M+ +G   +   ++ ++ G C  GRV  A  L 
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 252

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M + GC   V +Y  L+ G C+ ++ + A +    ML +  + +VV++NT+  G    
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARA----MLGRVPELNVVLFNTVIGGCLAE 308

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A +L++ M   G   D   Y   + GLCK G I  AV L R +    +  ++  Y
Sbjct: 309 GKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTY 368

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             ++   CK+G       L   +    L  +   YN MI+ALC DG+MD+A  L  +M +
Sbjct: 369 TIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRS 428

Query: 369 K 369
           +
Sbjct: 429 Q 429



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 126/227 (55%), Gaps = 6/227 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++R  GC P++ +YNT+I  LC       A ++FE +     E GVV   N +
Sbjct: 418 EAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLL----EEGVVA--NGI 471

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY TII  L ++G    A  L  +M     + +VV+YN LI   C   + + +  L  EM
Sbjct: 472 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 531

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++PN VS+N++++ELCK  ++ +A  L + M+  G+ P+   YNTL++G C  G +
Sbjct: 532 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 591

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + A  L   + +     ++ +Y+ILI+ +CK + ++ A  L +  ++
Sbjct: 592 HAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAMA 638


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 184/368 (50%), Gaps = 14/368 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A     K+     E  V+ YN+LING C+ G+   A   F+EM +          P  VT
Sbjct: 246 AIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG------LTPTVVT 299

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT++I G C EG   KA +++ +M  + I+PN  T+ ++I G C AN   EA  LF EM 
Sbjct: 300 YTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMK 359

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ + P+ V++NV++   C++G + EA  LL+ M+  G  P+ + Y  L+ G C  GRV+
Sbjct: 360 ERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVS 419

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+E    +     K N   YS L++GYCK    + A+S    M+ +G+  D+V Y  L 
Sbjct: 420 EAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILI 479

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G    H     F L  EM  HG+  D   Y   ID   K G + EA  L+  +      
Sbjct: 480 DGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCL 539

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV----VTYNIMIHALCADGKMDK 358
            ++  Y  LI+GLCK+G +  A EL   L +  L++DV    +TY   +  L   G M+K
Sbjct: 540 PNVVTYTALINGLCKAGLMDKA-EL---LSKETLVSDVTPNHITYGCFLDHLTRGGNMEK 595

Query: 359 ARDLFLDM 366
           A  L   M
Sbjct: 596 AVQLHHAM 603



 Score =  182 bits (461), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/354 (31%), Positives = 178/354 (50%), Gaps = 9/354 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  P V TY +LI+G C  G    A  ++ EM A G         PNT T+T II GLC+
Sbjct: 292 GLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG-------ISPNTYTFTAIISGLCR 344

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              + +A  LF +MK+  I P+ VTYN +I G C + + +EA  L  EM+ +G  P+  +
Sbjct: 345 ANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYT 404

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++ LC  G++ EA   ++ + +   + N   Y+ L+ G+C  GR   A      M 
Sbjct: 405 YRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMV 464

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++  Y+ILI+G  +  +      L  EM + G++PD VIY  +     +   ++
Sbjct: 465 ERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLK 524

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            AF L+D M   G   +   Y   I+GLCK G + +A  L +   +     +   Y C +
Sbjct: 525 EAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFL 584

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           D L + G ++ A +L  ++ +G L A  V+YNI+I   C  GK+++A  L   M
Sbjct: 585 DHLTRGGNMEKAVQLHHAMLKGFL-ATTVSYNILIRGFCRLGKIEEATKLLHGM 637



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 176/351 (50%), Gaps = 15/351 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P V T + L+NGL R       L LF+++ + N       +P+   Y+ ++  LC+    
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSAN------VQPDIYIYSAVVRSLCELKDF 147

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           +KAKE+   M+      ++V YN LIHG C +    EA  +   +M +G++ NVV++   
Sbjct: 148 NKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY-- 205

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
                  GK +EA  L + M + G+  N   Y+ L+D FC  G ++ A      M     
Sbjct: 206 -------GKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASI 258

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           +  V+ Y+ LINGYCK      A   + EM+ KG+ P VV Y +L  G     +  +AFK
Sbjct: 259 EFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFK 318

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +++EM   G++ +T+ +   I GLC+   + EA+ LF  ++  K       YN +I+G C
Sbjct: 319 VYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHC 378

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +SG +  A+ L   +     + D  TY  +I  LC+ G++ +A++   D+ 
Sbjct: 379 RSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLH 429



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 171/344 (49%), Gaps = 15/344 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+++ Y+ ++  LC     +   N  +EM +   EF   CK + V Y  +I GLCK   
Sbjct: 128 QPDIYIYSAVVRSLCE----LKDFNKAKEMIHWM-EFN-QCKLSIVVYNVLIHGLCKSRR 181

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A E+   +  + +  NVVT         Y   +NEA+ LF EM ++G+  N +++++
Sbjct: 182 IWEALEIKNCLMQKGLEANVVT---------YYGKFNEAELLFKEMGEKGLCANHITYSI 232

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  C+ G+MD A   L+ M +  +    + YN+L++G+C  G  + A+  F  M   G
Sbjct: 233 LIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKG 292

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
               V +Y+ LI+GYC   E   A  +Y+EM +KGI P+   +  +  GL   + +  A 
Sbjct: 293 LTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAI 352

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +LF EM+   +      Y   I+G C++G I EA  L   +    +  D   Y  LI GL
Sbjct: 353 RLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGL 412

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           C  GR+  A E    L +     + + Y+ ++H  C +G+   A
Sbjct: 413 CSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDA 456



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 178/406 (43%), Gaps = 67/406 (16%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALN--------------------------LFEEMANG 48
           C+ ++  YN LI+GLC++     AL                           LF+EM   
Sbjct: 162 CKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAELLFKEM--- 218

Query: 49  NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 108
            GE G+    N +TY+ +ID  C+ G +D A     KM   +I   V  YNSLI+G+C  
Sbjct: 219 -GEKGLCA--NHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKL 275

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
            + + AK  F EM+D+G+ P VV++  +++  C  G+  +A ++   M   G+ PN + +
Sbjct: 276 GNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTF 335

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
             ++ G C    +  A  LF  M+      +  +Y+++I G+C++  I  A  L  EM+ 
Sbjct: 336 TAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVG 395

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           KG  PD   Y  L  GL  + +V  A +  D++ +     +   Y   + G CK G   +
Sbjct: 396 KGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKD 455

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLC-------------------------------- 316
           AV   R +      +D+  Y  LIDG                                  
Sbjct: 456 AVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMID 515

Query: 317 ---KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              K+G LK A+ L+  +     + +VVTY  +I+ LC  G MDKA
Sbjct: 516 RHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKA 561



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 180/365 (49%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +++     P+  TYN +I G CR+G+   A +L +EM  G G       P+T 
Sbjct: 350 EAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMV-GKGFV-----PDTY 403

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLC  G V +AKE    +  ++   N + Y++L+HG+C    + +A      M
Sbjct: 404 TYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVM 463

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++GV  ++V + ++++   +         LL+ M   G+RP+A +Y  ++D     G +
Sbjct: 464 VERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNL 523

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   GC  NV +Y+ LING CK   ++ A  L  E L   + P+ + Y   
Sbjct: 524 KEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCF 583

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L     +E+A +L   M + G  A T +Y   I G C+ G I EA +L   +     
Sbjct: 584 LDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDI 642

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y+ +I   CK   L+ A +L+ ++    L  D + Y+ ++H  C  G+++KA +
Sbjct: 643 LPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFE 702

Query: 362 LFLDM 366
           L  +M
Sbjct: 703 LRDEM 707



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 132/256 (51%), Gaps = 7/256 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   ++  Y  LI+G  R   T     L +EM N         +P+ V YT +ID   K 
Sbjct: 467 GVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHG------LRPDAVIYTNMIDRHSKA 520

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A  L+  M DE   PNVVTY +LI+G C A   ++A+ L  E +   V PN +++
Sbjct: 521 GNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITY 580

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
              ++ L + G M++A +L   M++ G       YN L+ GFC  G++  A +L   M  
Sbjct: 581 GCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTD 639

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +  +YS +I   CK   ++ A+ L+  ML KG+KPD + Y+ L  G     ++E+
Sbjct: 640 NDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEK 699

Query: 254 AFKLFDEMQRHGVAAD 269
           AF+L DEM R G+ ++
Sbjct: 700 AFELRDEMIRRGMRSN 715



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 9/312 (2%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P   T + +++GL +    +    LF  +   N+ P++  Y++++   C   D+N+AK +
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M     + ++V +NV+++ LCK+ ++ EA  +   ++Q G+  N   Y         
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY--------- 204

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+ N AE LF  M   G   N  +YSILI+ +C+  E++ A+    +M    I+  V  
Sbjct: 205 YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN+L  G  ++     A   FDEM   G+      Y + I G C  G   +A +++  + 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +   +  +I GLC++  +  A  LF  +    ++   VTYN+MI   C  G + 
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNIS 384

Query: 358 KARDLFLDMEAK 369
           +A  L  +M  K
Sbjct: 385 EAFHLLDEMVGK 396



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 118/232 (50%), Gaps = 7/232 (3%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  ++   G  P+   Y  +I+   + G+   A  L++ M +        C PN VTYT
Sbjct: 493 GLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEG------CLPNVVTYT 546

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I+GLCK G +DKA+ L  +    ++ PN +TY   +       +  +A  L   M+ +
Sbjct: 547 ALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAML-K 605

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G     VS+N+++   C+ GK++EA++LL  M    + P+   Y+T++   C    +  A
Sbjct: 606 GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEA 665

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            +L+ +M   G K +  +YS L++G C   E+E A  L  EM+ +G++ + V
Sbjct: 666 IKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHV 717



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 9/249 (3%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D  + P V + + ++N L +  + ++   L + ++   V+P+ ++Y+ ++   C    
Sbjct: 87  MKDCNLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKD 146

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            N+A+E+   ME   CK ++  Y++LI+G CK++ I  AL + + ++ KG++ +VV Y  
Sbjct: 147 FNKAKEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYG 206

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
            F           A  LF EM   G+ A+   Y   ID  C+ G +  A+     +    
Sbjct: 207 KF---------NEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKAS 257

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E  +  YN LI+G CK G    A   F  +    L   VVTY  +I   C +G+  KA 
Sbjct: 258 IEFTVYPYNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAF 317

Query: 361 DLFLDMEAK 369
            ++ +M AK
Sbjct: 318 KVYNEMTAK 326



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 6/132 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A       + G      +YN LI G CR G    A  L   M + +        P+ 
Sbjct: 593 MEKAVQLHHAMLKGFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDND------ILPDY 646

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY+TII   CK   + +A +L+  M D+ + P+ + Y+ L+HG C A +  +A  L  E
Sbjct: 647 ITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDE 706

Query: 121 MMDQGVQPNVVS 132
           M+ +G++ N V+
Sbjct: 707 MIRRGMRSNHVT 718



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 6/84 (7%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY+T+I   C+  +   A+ L+  M +         KP+T+ Y+ ++ G C  G +
Sbjct: 644 PDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKG------LKPDTLAYSFLVHGCCIAGEL 697

Query: 77  DKAKELFLKMKDENINPNVVTYNS 100
           +KA EL  +M    +  N VT  S
Sbjct: 698 EKAFELRDEMIRRGMRSNHVTPKS 721


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 119/354 (33%), Positives = 193/354 (54%), Gaps = 10/354 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+ FT+N +I+GLC+TG    A ++ ++M      +G++  P+ VTY T+IDG  K G 
Sbjct: 185 SPDKFTFNIVISGLCKTGQLRKAGDVAKDMRG----WGLM--PSVVTYNTLIDGYYKWGR 238

Query: 76  VDKAKELFLKMKDEN---INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
             K   + + +K+ N   I+PNVVT+N LI+G+C  ++   A  +F EM   G+  N+V+
Sbjct: 239 AGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVT 298

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++ LC+ GK++++ +L+E M ++G+       N++++GFC  G +  AE     M 
Sbjct: 299 YTSLVSGLCREGKVEDSMKLVEEMEELGL-ATLPTLNSVLNGFCKKGMMVEAEGWVDGMA 357

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G K NV +Y+ LI+GY +  +++ A +    M  KGI PDV  YN L  G        
Sbjct: 358 QKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWR 417

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
               L DEM+  GV AD   Y   I  LC  G + +AV+L   +  +  E   R YN +I
Sbjct: 418 SVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAII 477

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +G C+ G  K A ++   + +    A+VVT N+ +   C  GKMD+A  +  +M
Sbjct: 478 NGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEM 531



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 172/361 (47%), Gaps = 10/361 (2%)

Query: 10  LRVFGCEPNVFTYNTLING---LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           +R +G  P+V TYNTLI+G     R G       L +EM     + G+   PN VT+  +
Sbjct: 214 MRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEM----NQAGI--SPNVVTFNVL 267

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I+G CKE  +  A ++F +M+   I  N+VTY SL+ G C      ++  L  EM + G+
Sbjct: 268 INGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGL 327

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
              + + N ++N  CK G M EA   ++ M Q G++PN   YNTL+DG+   G++  A  
Sbjct: 328 A-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATA 386

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
              +M   G   +V +Y+ LI G+  + +      L  EM   G+K D+V YN L   L 
Sbjct: 387 AKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALC 446

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
              +V +A KL DEM   G+      Y   I+G C+ G    A ++   +   K   ++ 
Sbjct: 447 CKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVV 506

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             N  +   CK G++  A  +   +    L+ + +TY I+   +   G +   R    D+
Sbjct: 507 TCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDIRGYAADV 566

Query: 367 E 367
            
Sbjct: 567 S 567



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 144/273 (52%), Gaps = 28/273 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------NG 48
           A  +F ++R  G   N+ TY +L++GLCR G    ++ L EEM               NG
Sbjct: 280 AIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLATLPTLNSVLNG 339

Query: 49  NGEFGVVC--------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPN 94
             + G++               KPN VTY T+IDG  + G + +A      M  + I+P+
Sbjct: 340 FCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPD 399

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           V TYN LI GF  + DW     L  EM + GV+ ++V++NV++  LC  G++ +A +LL+
Sbjct: 400 VKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLD 459

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M+++G+ P    YN +++GFC  G    A ++ + ME    + NV + ++ +  +CK  
Sbjct: 460 EMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMG 519

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           +++ A  + +EML KG+ P+ + Y  +  G+ E
Sbjct: 520 KMDEANVVLNEMLEKGLVPNRITYEIINSGMIE 552



 Score =  144 bits (362), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 145/284 (51%), Gaps = 7/284 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G  PNV T+N LING C+  +   A+ +FEEM     + G+    N VTYT+
Sbjct: 248 LLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMR----QHGIPA--NMVTYTS 301

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GLC+EG V+ + +L  +M++  +   + T NS+++GFC      EA+     M  +G
Sbjct: 302 LVSGLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKG 360

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++PNVV++N +++   + GKM EA+     M   G+ P+   YN L+ GF  +       
Sbjct: 361 MKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVS 420

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M+  G K ++ +Y++LI   C   E+  A+ L  EM+  G++P    YN +  G 
Sbjct: 421 GLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGF 480

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            E    + A  +   M++    A+      F+   CK G + EA
Sbjct: 481 CEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEA 524



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 162/360 (45%), Gaps = 8/360 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           LR           + L+  L R    + A   F         +    +P+  +   ++  
Sbjct: 107 LRALPASSRPLVADMLVLALARASQPLAAYGAFLLAGADYPRY----RPSAFSVNALLAA 162

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           L +   VD A+  F       ++P+  T+N +I G C      +A  +  +M   G+ P+
Sbjct: 163 LVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPS 222

Query: 130 VVSFNVIMN---ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           VV++N +++   +  + GKM     LL+ M Q G+ PN   +N L++G+C    +  A +
Sbjct: 223 VVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIK 282

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           +F  M   G   N+ +Y+ L++G C+  ++E ++ L  EM   G+   +   N++  G  
Sbjct: 283 VFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFC 341

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +   +  A    D M + G+  +   Y T IDG  + G + EA      +       D++
Sbjct: 342 KKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVK 401

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            YNCLI G   S   +    L   +    + AD+VTYN++I ALC  G++ KA  L  +M
Sbjct: 402 TYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEM 461



 Score = 42.0 bits (97), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 10/106 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK--PN 59
           +A  L  ++   G EP   TYN +ING C  G    A ++   M          CK   N
Sbjct: 453 KAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEK--------CKKRAN 504

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
            VT    +   CK G +D+A  +  +M ++ + PN +TY  +  G 
Sbjct: 505 VVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGM 550


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  194 bits (493), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 107/299 (35%), Positives = 162/299 (54%), Gaps = 6/299 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A   ++   G +P+ F YN +++GLC+      A  LFE+M            PN V
Sbjct: 27  DALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR------INPNVV 80

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GLCK   ++ A ELF +M  +   P  V+YN+LI GFC   D   AK +F +M
Sbjct: 81  TYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKM 140

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PNVV++  +++ L K+GK+  A+ +L+ M++ GV PN   Y+ L+DGFC   RV
Sbjct: 141 VRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRV 200

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   M + G    V +Y+IL+N  C+  ++E A  L+  M  +   P VV YNTL
Sbjct: 201 DEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTL 260

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
              L    Q++ A +L+ EM   G   D   Y T   GL + G + EA EL   +++ K
Sbjct: 261 LRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTK 319



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/315 (34%), Positives = 161/315 (51%), Gaps = 6/315 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY  ++  LC+T     AL   EEMA          KP+   Y  ++ GLC+E  V
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRG------IKPDAFIYNFVLSGLCQEEKV 60

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A+ LF KM  + INPNVVTYN+LI+G C A     A  LF EM  +G  P  VS+N +
Sbjct: 61  EEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTL 120

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK   +  A  + + M++    PN   Y TL+DG   +G+V  A E+   M   G 
Sbjct: 121 IDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGV 180

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV +YS LI+G+CK + ++ A  L  +M+++GI P VV YN L   L    ++E AFK
Sbjct: 181 TPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFK 240

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LF  M +         Y T +  LC +  +  A  L+  +       D   Y+ L  GL 
Sbjct: 241 LFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLT 300

Query: 317 KSGRLKIAWELFRSL 331
           ++G++  A EL   +
Sbjct: 301 RAGKVHEAQELMEKM 315



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 161/310 (51%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ +TY  I++ LCK   +D A     +M    I P+   YN ++ G C      EA+ L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M+ Q + PNVV++N ++N LCK  +++ A  L + M   G  P    YNTL+DGFC 
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
              +  A+++F  M    C  NV +Y+ LI+G  K+ +++ A  +   M+ KG+ P+V  
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+ L  G  ++ +V+ A KL ++M   G+A     Y   ++ LC+   + +A +LFR + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +    +  YN L+  LC   +L  A  L+  +       D +TY+ +   L   GK+ 
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 358 KARDLFLDME 367
           +A++L   M+
Sbjct: 307 EAQELMEKMK 316



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 150/277 (54%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ +TY  ++   C     ++A     EM  +G++P+   +N +++ LC+  K++EA  L
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E M++  + PN   YNTL++G C   R+  A ELF  M   G      SY+ LI+G+CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            K++  A  ++ +M+     P+VV Y TL  GL +  +V+ A ++ D M + GV  +   
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   IDG CK   + EA +L   +        +  YN L++ LC++ +L+ A++LFR + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +      VVTYN ++ ALC   ++D A  L+ +M AK
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAK 283



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A  LF  +    C P V TYNTL+  LC       A  L+ EM A G       C P+ 
Sbjct: 237 DAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKG-------CPPDA 289

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
           +TY T+  GL + G V +A+EL  KMK    NP
Sbjct: 290 ITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNP 322


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 189/362 (52%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + ++  G  PN  T+N L++G C+ G    A  + + MA  N        P+  
Sbjct: 265 EARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN------VLPDVW 318

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCK+G +D+A  L  +M++  + P+VVTYN+LI+G    +   +   L  +M
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+PN V++NV++    K GKMD A   L  M + G  P+   +NTL++G+C  GR+
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRL 438

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M   G K N  + + +++  C  ++++ A  L S    +G   D V Y TL
Sbjct: 439 SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            +G F+  +   A KL+DEM+   +      Y T I GLC +G   ++++    L     
Sbjct: 499 IMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN +I G C+ G+++ A++    + +     D+ T NI++  LC +G +DKA  
Sbjct: 559 VPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALK 618

Query: 362 LF 363
           LF
Sbjct: 619 LF 620



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/359 (31%), Positives = 187/359 (52%), Gaps = 6/359 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           + A+F  +   G + N  T+N LI G C       A+ L  +M +        C P+ V+
Sbjct: 196 SKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKD------FSCFPDNVS 249

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TI+D LCK+G +++A++L L MK+  + PN  T+N L+ G+C      EA  +   M 
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V P+V ++N+++  LCK+GK+DEA RL + M  + + P+   YNTL++G        
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +  EL   ME  G K N  +Y++++  Y K  +++ A +   +M   G  PD V +NTL 
Sbjct: 370 KGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLI 429

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  ++  AF++ DEM R G+  ++    T +  LC    + +A +L  +     Y 
Sbjct: 430 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 489

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +D  +Y  LI G  K G+   A +L+  +    +I  ++TYN MI  LC  GK D++ D
Sbjct: 490 VDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSID 548



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 181/347 (52%), Gaps = 6/347 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNTLING      ++    L ++M       G   KPN VTY  ++    KEG +
Sbjct: 350 PDVVTYNTLINGCFDCSSSLKGFELIDKME------GKGVKPNAVTYNVVVKWYVKEGKM 403

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A     KM++   +P+ VT+N+LI+G+C A   +EA  +  EM  +G++ N V+ N I
Sbjct: 404 DNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 463

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC   K+D+A +LL    + G   +   Y TL+ G+   G+   A +L+  M+    
Sbjct: 464 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEI 523

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +Y+ +I G C + + + ++   +E+L  G+ PD   YNT+ +G     QVE+AF+
Sbjct: 524 IPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQ 583

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             ++M +     D +     + GLC  G + +A++LF T       +D   YN +I GLC
Sbjct: 584 FHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLC 643

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K  R + A++L   +    L  D  TYN ++ AL   G+M +A +  
Sbjct: 644 KEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFM 690



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 169/361 (46%), Gaps = 38/361 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA +F +++    +PN+ T NTLIN L R                         KP+   
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVR----------------------YPSKPSVYL 195

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              I   + K G                +  N  T+N LI+G C  N  +EA  L  +M 
Sbjct: 196 SKAIFSDVIKLG----------------VKVNTNTFNILIYGCCIENKLSEAIGLIGKMK 239

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D    P+ VS+N I++ LCK GK++EA  LL  M   G+ PN   +N L+ G+C  G + 
Sbjct: 240 DFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLK 299

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++   M       +V++Y++LI G CK+ +I+ A  L  EM +  + PDVV YNTL 
Sbjct: 300 EAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLI 359

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+     + F+L D+M+  GV  +   Y   +    K G +  A    R +    + 
Sbjct: 360 NGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFS 419

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   +N LI+G CK+GRL  A+ +   + R  L  + VT N ++H LC + K+D A  L
Sbjct: 420 PDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKL 479

Query: 363 F 363
            
Sbjct: 480 L 480



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 142/290 (48%), Gaps = 29/290 (10%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEFGVVCKP- 58
           K+   G  P+  T+NTLING C+ G    A  + +EM+           N     +C   
Sbjct: 412 KMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 471

Query: 59  -------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 99
                              + V+Y T+I G  K+G   +A +L+ +MK++ I P+++TYN
Sbjct: 472 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYN 531

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           ++I G C++   +++     E+++ G+ P+  ++N I+   C+ G++++A +    M++ 
Sbjct: 532 TMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKK 591

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
             +P+ F  N L+ G C  G +++A +LF +  S G   +  +Y+ +I+G CK    E A
Sbjct: 592 SFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEA 651

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             L +EM  K + PD   YN +   L +  +++ A +    +   G   D
Sbjct: 652 FDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKLQD 701



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 127/270 (47%), Gaps = 29/270 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L+ +++     P++ TYNT+I GLC +G T  +++   E+     E G+V  P+ 
Sbjct: 509 VEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELL----ESGLV--PDE 562

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY TII G C+EG V+KA +   KM  ++  P++ T N L+ G C     ++A  LF  
Sbjct: 563 TTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNT 622

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + +G   + V++N I++ LCK  + +EA  LL  M +  + P+ + YN ++      GR
Sbjct: 623 WISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGR 682

Query: 181 VNRAEELFVSMESMG-----------------------CKHNVFSYSILINGYCKNKEIE 217
           +  AEE    +   G                          N  ++S  IN  C   + +
Sbjct: 683 MKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYK 742

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
            A+ +  E   KGI      Y +L  GL +
Sbjct: 743 DAMHMVQESTQKGITLHKSTYISLMEGLIK 772



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 3/275 (1%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE---ASRL 152
           V  ++ I  +   N  + A  +F  M    ++PN+++ N ++N L +         +  +
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAI 199

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              +I++GV+ N   +N L+ G C+  +++ A  L   M+   C  +  SY+ +++  CK
Sbjct: 200 FSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCK 259

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++  A  L  +M + G+ P+   +N L  G  ++  ++ A ++ D M ++ V  D W 
Sbjct: 260 KGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWT 319

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I GLCK+G I EA  L   +  LK   D+  YN LI+G          +EL   + 
Sbjct: 320 YNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKME 379

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +  + VTYN+++     +GKMD A +    ME
Sbjct: 380 GKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKME 414



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 110/217 (50%), Gaps = 6/217 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           +Y TLI G  + G ++ A+ L++EM     E  ++  P+ +TY T+I GLC  G  D++ 
Sbjct: 494 SYGTLIMGYFKDGKSVEAMKLWDEMK----EKEII--PSIITYNTMIGGLCHSGKTDQSI 547

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +   ++ +  + P+  TYN++I G+C      +A     +M+ +  +P++ + N+++  L
Sbjct: 548 DKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C  G +D+A +L    I  G   +A  YNT++ G C   R   A +L   ME      + 
Sbjct: 608 CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDC 667

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           ++Y+ +++       ++ A    S ++ +G   D  I
Sbjct: 668 YTYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTI 704



 Score = 45.4 bits (106), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 69/167 (41%), Gaps = 29/167 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF      G   +  TYNT+I+GLC+      A +L  EM     + G    P+  
Sbjct: 615 KALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEK--KLG----PDCY 668

Query: 62  TYTTIIDGLCKEGFVDKAKELFL------KMKDENI-----------------NPNVVTY 98
           TY  I+  L   G + +A+E         K++D+ I                 +PN VT+
Sbjct: 669 TYNAILSALADAGRMKEAEEFMSRIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTF 728

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           +  I+  C    + +A  +  E   +G+  +  ++  +M  L K  K
Sbjct: 729 SEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 196/368 (53%), Gaps = 8/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   + K+ V G  P+VF  +T+I G  +      AL LF+E    + E G+    N  
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE----SFETGLA---NVF 444

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
              TI+  LCK+G  D+A EL  KM+   I PNVV+YN+++ G C   + + A+ +F  +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G++PN  +++++++   +N     A  ++  M    +  N  VY T+++G C  G+ 
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564

Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++A EL  +M E      +  SY+ +I+G+ K  E++ A++ Y EM   GI P+V+ Y +
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTS 624

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL + +++++A ++ DEM+  GV  D  AY   IDG CK   +  A  LF  L    
Sbjct: 625 LMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEG 684

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
                  YN LI G    G +  A +L++ + +  L  D+ TY  +I  L  DG +  A 
Sbjct: 685 LNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILAS 744

Query: 361 DLFLDMEA 368
           +L+ +M+A
Sbjct: 745 ELYTEMQA 752



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 193/366 (52%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+   G  PNV +YN ++ G CR  +  +A  +F  +     E G+  KPN  
Sbjct: 461 EATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNIL----EKGL--KPNNY 514

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDG  +      A E+   M   NI  N V Y ++I+G C     ++A+ L   M
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574

Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++  +  + +S+N I++   K G+MD A    E M   G+ PN   Y +LM+G C   R
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A E+   M++ G K ++ +Y  LI+G+CK   +E A +L+SE+L +G+ P   IYN+
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   +  +  A  L+ +M + G+  D   Y T IDGL K+G ++ A EL+  ++ + 
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   Y  +++GL K G+     ++F  + +  +  +V+ YN +I     +G +D+A 
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814

Query: 361 DLFLDM 366
            L  +M
Sbjct: 815 RLHDEM 820



 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/392 (29%), Positives = 191/392 (48%), Gaps = 42/392 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+   Y+  +   C+T    +A +L  EM         +C P+  TYT++I    K+
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK-----LCVPSQETYTSVILASVKQ 317

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A  L  +M  + I+ NVV   SLI G C  ND   A  LF +M  +G  PN V+F
Sbjct: 318 GNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTF 377

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRP------------------------------ 163
           +V++    KNG+M++A    + M  +G+ P                              
Sbjct: 378 SVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFE 437

Query: 164 ----NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
               N FV NT++   C  G+ + A EL   MES G   NV SY+ ++ G+C+ K ++ A
Sbjct: 438 TGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLA 497

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             ++S +L KG+KP+   Y+ L  G F  H  + A ++ + M    +  +   Y+T I+G
Sbjct: 498 RIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIING 557

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIR--AYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           LCK G   +A EL   + I +  L +   +YN +IDG  K G +  A   +  +    + 
Sbjct: 558 LCKVGQTSKARELLANM-IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGIS 616

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +V+TY  +++ LC + +MD+A ++  +M+ K
Sbjct: 617 PNVITYTSLMNGLCKNNRMDQALEMRDEMKNK 648



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 182/361 (50%), Gaps = 7/361 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G +PN +TY+ LI+G  R      AL +   M + N E       N V 
Sbjct: 497 ARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEV------NGVV 550

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           Y TII+GLCK G   KA+EL   M +E  +  + ++YNS+I GF    + + A   + EM
Sbjct: 551 YQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEM 610

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNV+++  +MN LCKN +MD+A  + + M   GV+ +   Y  L+DGFC    +
Sbjct: 611 CGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNM 670

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  +   G   +   Y+ LI+G+     +  AL LY +ML  G++ D+  Y TL
Sbjct: 671 ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 730

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +  A +L+ EMQ  G+  D   Y   ++GL K G  V+ V++F  ++    
Sbjct: 731 IDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  YN +I G  + G L  A+ L   +    ++ D  T++I++     + +  +A  
Sbjct: 791 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAAS 850

Query: 362 L 362
           L
Sbjct: 851 L 851



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 135/332 (40%), Gaps = 46/332 (13%)

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD AK    ++       N   +N L++ +      + A  +  +M++  V P     N
Sbjct: 150 LVDSAKSFGFEV-------NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVN 202

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
             ++ L +   + EA  L   M+ IGV  +      LM       +   A E+       
Sbjct: 203 RTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIER 262

Query: 195 GCKHNVFSYSILINGYCKNKEI------------------------------------EG 218
           G + +   YS+ +   CK  ++                                    + 
Sbjct: 263 GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+ L  EMLS GI  +VV   +L  G  + + +  A  LFD+M++ G + ++  +   I+
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLI 337
              KNG + +A+E ++ + +L     +   + +I G  K  + + A +LF  S   G  +
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG--L 440

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A+V   N ++  LC  GK D+A +L   ME++
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESR 472



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/272 (22%), Positives = 121/272 (44%), Gaps = 5/272 (1%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQ----GVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           LI     +N    A  L  +++D     G + N  +FN ++N   K+ + D A  ++  M
Sbjct: 130 LIRYVSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM 189

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +++ V P     N  +        +  A+EL+  M ++G   +  +  +L+    + ++ 
Sbjct: 190 LELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKP 249

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW-AYRT 275
             AL + S  + +G +PD ++Y+       +   +  A  L  EM+   +   +   Y +
Sbjct: 250 AEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTS 309

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I    K G + +A+ L   +      +++ A   LI G CK+  L  A  LF  + +  
Sbjct: 310 VILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEG 369

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              + VT++++I     +G+M+KA + +  ME
Sbjct: 370 PSPNSVTFSVLIEWFRKNGEMEKALEFYKKME 401


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 186/361 (51%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L   L  FG  PNV  Y TLI+G C+ G  ++A NLF +M       G+V  PN  TY+ 
Sbjct: 180 LLAVLEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKM----DRLGLV--PNQHTYSV 233

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++G  K+G   +  +++  M    I PN   YN LI  +C     ++A  +F EM ++G
Sbjct: 234 LMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKG 293

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +   V+++N+++  LC+  K  EA +L+  + ++G+ PN   YN L++GFC  G+++ A 
Sbjct: 294 IACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAV 353

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            LF  ++S G    + +Y+ LI GY K + + GAL L  EM  + I    V Y  L    
Sbjct: 354 RLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAF 413

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             ++  ++A ++   M++ G+  D + Y   I G C NG + EA + F++L  +  + + 
Sbjct: 414 ARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNS 473

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I G CK G    A  L   +    ++ +V ++   +  LC D K  +A  L   
Sbjct: 474 VIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWKEAELLLGQ 533

Query: 366 M 366
           M
Sbjct: 534 M 534



 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 176/349 (50%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N +++  +I G C  G+ +    L   +     EFG+   PN V YTT+IDG CK G V 
Sbjct: 157 NAYSFGIMITGCCEAGYFVRVFRLLAVLE----EFGL--SPNVVIYTTLIDGCCKNGDVM 210

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            AK LF KM    + PN  TY+ L++GF       E   ++  M   G+ PN  ++N ++
Sbjct: 211 LAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAYAYNCLI 270

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +E C +G +D+A ++   M + G+      YN L+ G C   +   A +L   +  +G  
Sbjct: 271 SEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLS 330

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N+ +Y+ILING+C   +++ A+ L++++ S G+ P +V YNTL  G  ++  +  A  L
Sbjct: 331 PNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDL 390

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM+   +A     Y   ID   +  Y  +A E+   +       D+  Y+ LI G C 
Sbjct: 391 VKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCV 450

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +G +K A + F+SL    L  + V YN MIH  C +G   +A  L  +M
Sbjct: 451 NGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEM 499



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 165/353 (46%), Gaps = 7/353 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A  LF K+   G  PN  TY+ L+NG  + G       ++E M       G+V  PN 
Sbjct: 210 MLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRS----GIV--PNA 263

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  +I   C +G VDKA ++F +M+++ I   V+TYN LI G C    + EA  L  +
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +   G+ PN+V++N+++N  C  GKMD A RL   +   G+ P    YNTL+ G+     
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +L   ME      +  +Y+ILI+ + +    + A  ++S M   G+ PDV  Y+ 
Sbjct: 384 LAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSV 443

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      ++ A K F  +    +  ++  Y T I G CK G    A+ L   +    
Sbjct: 444 LIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSG 503

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
              ++ ++   +  LC+  + K A  L   +    L   V  Y  M+H +  D
Sbjct: 504 MVPNVASFCSTMGLLCRDEKWKEAELLLGQMINSGLKPSVSLYK-MVHKVKGD 555



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 146/314 (46%), Gaps = 1/314 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C   T  Y  I++        D+A      M  E   P   T+N+L+     +N +++A 
Sbjct: 85  CSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAW 144

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +F  ++   V  N  SF +++   C+ G      RLL ++ + G+ PN  +Y TL+DG 
Sbjct: 145 WIF-NVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGC 203

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G V  A+ LF  M+ +G   N  +YS+L+NG+ K         +Y  M   GI P+ 
Sbjct: 204 CKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNA 263

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             YN L         V++AFK+F EM+  G+A     Y   I GLC+     EAV+L   
Sbjct: 264 YAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHK 323

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +  +    +I  YN LI+G C  G++  A  LF  L    L   +VTYN +I        
Sbjct: 324 VNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVEN 383

Query: 356 MDKARDLFLDMEAK 369
           +  A DL  +ME +
Sbjct: 384 LAGALDLVKEMEER 397



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 7/353 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C      Y+ ++N    +  T  AL     M +          P + T+  ++  L +  
Sbjct: 85  CSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHA------PLSNTFNNLLCLLIRSN 138

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           + DKA  +F  +K + +  N  ++  +I G C A  +     L   + + G+ PNVV + 
Sbjct: 139 YFDKAWWIFNVLKSKVV-LNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYT 197

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +++  CKNG +  A  L   M ++G+ PN   Y+ LM+GF   G      +++ +M   
Sbjct: 198 TLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRS 257

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   N ++Y+ LI+ YC +  ++ A  +++EM  KGI   V+ YN L  GL    +   A
Sbjct: 258 GIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEA 317

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            KL  ++ + G++ +   Y   I+G C  G +  AV LF  L+       +  YN LI G
Sbjct: 318 VKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAG 377

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             K   L  A +L + +    +    VTY I+I A       DKA ++   ME
Sbjct: 378 YSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLME 430



 Score = 81.3 bits (199), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 132/338 (39%), Gaps = 85/338 (25%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL----------ELMIQI------- 159
           LF     QG+     S + I+N L  +G + +A  L+           LM+Q+       
Sbjct: 25  LFNTASYQGLHHTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLTQAHFTS 84

Query: 160 --GVRP------NAFVY-----------------------NTLMDGFCLTGRVNRAEELF 188
                P      NA+V+                       NT  +  CL  R N  ++ +
Sbjct: 85  CSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKAW 144

Query: 189 VSMESMGCK--HNVFSYSILINGYC----------------------------------- 211
                +  K   N +S+ I+I G C                                   
Sbjct: 145 WIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGCC 204

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           KN ++  A +L+ +M   G+ P+   Y+ L  G F+       F++++ M R G+  + +
Sbjct: 205 KNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSGIVPNAY 264

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           AY   I   C +G + +A ++F  +R       +  YN LI GLC+  +   A +L   +
Sbjct: 265 AYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKV 324

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  L  ++VTYNI+I+  C  GKMD A  LF  +++ 
Sbjct: 325 NKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSS 362


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/355 (32%), Positives = 184/355 (51%), Gaps = 8/355 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC+P+  TY  LI  LC  G    A NLF+EM A G       CKPN  TYT +IDGLC+
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARG-------CKPNVHTYTVLIDGLCR 348

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +G +++A  +  KM  + I P+V+TYN+LI+G+C       A  L   M  +  +PNV +
Sbjct: 349 DGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN +M  LC+ GK  +A  LL+ M+  G+ P+   YN L+DG C  G +N A +L  SM 
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMN 468

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           S   + +  +++ +IN +CK  + + A +    ML KGI  D V   TL  G+  + +  
Sbjct: 469 SFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTR 528

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  + + + +  +     +    +D L K   + E + +   +  L     +  Y  L+
Sbjct: 529 DALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           DGL +SG +  ++ +   +     + +V  Y I+I+ LC  G++++A  L   M+
Sbjct: 589 DGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 172/343 (50%), Gaps = 6/343 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PN  +Y+ LI+GLC  G    A  L ++M    GE G  C+P+T TYT +I  LC  G
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQM----GEKG--CQPSTRTYTVLIKALCDRG 315

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +DKA  LF +M      PNV TY  LI G C      EA  +  +M+  G+ P+V+++N
Sbjct: 316 LIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYN 375

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N  CK+G++  A  LL +M +   +PN   +N LM+G C  G+  +A  L   M   
Sbjct: 376 ALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   ++ SY++LI+G C+   +  A  L + M S  ++PD + +  +     +  + + A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
                 M R G++ D     T IDG+C  G   +A+ +  TL  ++      + N ++D 
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDM 555

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           L K  +LK    +   + +  L+  VVTY  ++  L   G + 
Sbjct: 556 LSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDIS 598



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/357 (31%), Positives = 189/357 (52%), Gaps = 12/357 (3%)

Query: 7   FMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           F +LR V G   N   Y++L+  L +     +A   +  M       G++       Y T
Sbjct: 147 FDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI------DYRT 200

Query: 66  IIDGLCKEGFVDKAKELFLKMKDEN--INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           I++ LCK G+ + A+    K+      ++ ++VT  SL+ GFC   +  +A  +F  M  
Sbjct: 201 IVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVT--SLLLGFCRGLNLRDALKVFDLMSR 258

Query: 124 QGV-QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +G   PN VS++++++ LC+ G+++EA  L + M + G +P+   Y  L+   C  G ++
Sbjct: 259 EGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  LF  M + GCK NV +Y++LI+G C++ +IE A  +  +M+  GI P V+ YN L 
Sbjct: 319 KAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALI 378

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  +V  AF+L   M++     +   +   ++GLC+ G   +AV L + +      
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            DI +YN LIDGLC+ G + +A++L  S+    L  D +T+  +I+A C  GK D A
Sbjct: 439 PDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVA 495



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 168/339 (49%), Gaps = 7/339 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y T++N LC+ G+T  A     ++     + G +   + VT  +++ G C+   +  A +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKIL----KVGFLLDSHIVT--SLLLGFCRGLNLRDALK 251

Query: 82  LFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +F  M  E    PN V+Y+ LIHG C      EA  L  +M ++G QP+  ++ V++  L
Sbjct: 252 VFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C  G +D+A  L + MI  G +PN   Y  L+DG C  G++  A  +   M   G   +V
Sbjct: 312 CDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSV 371

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ LINGYCK+  +  A  L + M  +  KP+V  +N L  GL  + +  +A  L   
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M  +G++ D  +Y   IDGLC+ G++  A +L  ++     E D   +  +I+  CK G+
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGK 491

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +A      + R  +  D VT   +I  +C  GK   A
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDA 530



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/401 (29%), Positives = 182/401 (45%), Gaps = 46/401 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+   G  P+V TYN LING C+ G  + A  L   M          CKPN  
Sbjct: 354 EANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR------ACKPNVR 407

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++GLC+ G   KA  L  +M D  ++P++V+YN LI G C     N A  L   M
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSM 467

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++P+ ++F  I+N  CK GK D AS  L LM++ G+  +     TL+DG C  G+ 
Sbjct: 468 NSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKT 527

Query: 182 NRA----EEL--------------FVSMESMGCK-----------------HNVFSYSIL 206
             A    E L               + M S GCK                  +V +Y+ L
Sbjct: 528 RDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTL 587

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G  ++ +I G+  +   M   G  P+V  Y  +  GL +  +VE A KL   MQ  GV
Sbjct: 588 VDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG--LCKSGRLKIA 324
           + +   Y   + G   NG +  A+E  R +    YEL+ R Y+ L+ G  L + G  +  
Sbjct: 648 SPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETD 707

Query: 325 WELFRSLPRGVLIADVVTYNI---MIHALCADGKMDKARDL 362
            E  + L   V      T  +   ++  LC +G+ D++  L
Sbjct: 708 PECIKELISVVEQLGGSTSGLCIFLVTRLCKEGRTDESNGL 748



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 157/312 (50%), Gaps = 3/312 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y++++  L K      A   + +M+ +     ++ Y ++++  C  N + EA  +F
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC-KNGYTEAAEMF 217

Query: 119 I-EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV-RPNAFVYNTLMDGFC 176
           + +++  G   +      ++   C+   + +A ++ +LM + G   PN+  Y+ L+ G C
Sbjct: 218 MCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLC 277

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  A  L   M   GC+ +  +Y++LI   C    I+ A +L+ EM+++G KP+V 
Sbjct: 278 EVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVH 337

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y  L  GL    ++E A  +  +M + G+      Y   I+G CK+G +V A EL   +
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + ++R +N L++GLC+ G+   A  L + +    L  D+V+YN++I  LC +G M
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457

Query: 357 DKARDLFLDMEA 368
           + A  L   M +
Sbjct: 458 NVAYKLLTSMNS 469



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 100/203 (49%), Gaps = 1/203 (0%)

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           Y T+++  C  G    AE     +  +G   +    + L+ G+C+   +  AL ++  M 
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMS 257

Query: 228 SKGI-KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
            +G   P+ V Y+ L  GL E+ ++E AF L D+M   G    T  Y   I  LC  G I
Sbjct: 258 REGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +A  LF  +     + ++  Y  LIDGLC+ G+++ A  + R + +  +   V+TYN +
Sbjct: 318 DKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377

Query: 347 IHALCADGKMDKARDLFLDMEAK 369
           I+  C DG++  A +L   ME +
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKR 400



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 117/267 (43%), Gaps = 47/267 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E  A+  K+   G  P+V TY TL++GL R+G    +  + E M          C PN  
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSG------CLPNVY 617

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT II+GLC+ G V++A++L   M+D  ++PN VTY  ++ G+      + A      M
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677

Query: 122 MDQGVQPNVVSFNVIM----------------------------------------NELC 141
           +++G + N   ++ ++                                          LC
Sbjct: 678 VERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLC 737

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G+ DE++ L++ +++ GV     + + +M+ +C   +  +  EL   +   G   +  
Sbjct: 738 KEGRTDESNGLVQTILKSGVFLEKAI-DIIMESYCSKKKHTKCVELITLVLKSGFVPSFK 796

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLS 228
           S+ ++I G  K  + E A  L  E+L+
Sbjct: 797 SFCLVIQGLKKEGDTERARELVMELLT 823


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 169/320 (52%), Gaps = 12/320 (3%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
             C PNVF++  ++ GLC    +  AL L   MA+  G     C PN V+Y+T+IDGL K
Sbjct: 155 LSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGG----CLPNVVSYSTVIDGLLK 210

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G  DKA   + +M D  I PNVV Y+S+I   C     ++A  +   M+  GV PN  +
Sbjct: 211 GGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFT 270

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +  +++  C +G++ EA + LE M   GV PN   Y++ MD  C  GR   A ++F SM 
Sbjct: 271 YTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMV 330

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGAL----SLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             G K ++ +YS L++GY     IEGAL     L+  M+   ++PD  ++NTL     + 
Sbjct: 331 KRGLKPDITTYSSLLHGYA----IEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQ 386

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +V+ A  +F +M++ G+  +   Y T I+G CK   +  A+ LF+ +       +   Y
Sbjct: 387 GKVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITY 446

Query: 309 NCLIDGLCKSGRLKIAWELF 328
           N ++ GL ++GR   A E +
Sbjct: 447 NIMLQGLFRTGRTATAKEFY 466



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 149/336 (44%), Gaps = 6/336 (1%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
            A++ F  MA        +  P   TY  +I   C  G +D        +  +      +
Sbjct: 70  AAVSRFNRMARAGAS---MVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFRVEPI 126

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
            +N L+ G C     ++A  + +  M +    PNV S  +I+  LC   +  EA  LL +
Sbjct: 127 IFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALELLHM 186

Query: 156 MIQI--GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           M     G  PN   Y+T++DG    G  ++A   +  M       NV  YS +I   CK 
Sbjct: 187 MADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAALCKG 246

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           + ++ A+ ++  M+  G+ P+   Y +L  G     Q+  A K  ++M  +GV  +   Y
Sbjct: 247 QAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPNVVTY 306

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            +F+D LCKNG   EA ++F ++     + DI  Y+ L+ G    G L     LF  + +
Sbjct: 307 SSFMDYLCKNGRCTEARKIFDSMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQ 366

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +  D   +N +I+A    GK+D+A  +F  M  +
Sbjct: 367 SDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKMRQQ 402



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 101/196 (51%), Gaps = 6/196 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+   G EPNV TY++ ++ LC+ G    A  +F+ M           KP+  
Sbjct: 286 EAIKFLEKMCSNGVEPNVVTYSSFMDYLCKNGRCTEARKIFDSMVKRG------LKPDIT 339

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++ G   EG + +   LF  M   ++ P+   +N+LI+        +EA  +F +M
Sbjct: 340 TYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKM 399

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG++PN V+++ ++N  CK  +M+ A  L + M+  GV PN   YN ++ G   TGR 
Sbjct: 400 RQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYNIMLQGLFRTGRT 459

Query: 182 NRAEELFVSMESMGCK 197
             A+E +V +   G K
Sbjct: 460 ATAKEFYVQIIKSGKK 475



 Score = 43.1 bits (100), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 2/116 (1%)

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD--IRAY 308
            E A  +FDE+ R G+ A   +    +  + ++          R  R     +   +  Y
Sbjct: 34  AEDALDVFDELLRRGIGAPIRSLNGALADVARDNPAAAVSRFNRMARAGASMVTPTVHTY 93

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             LI   C +GRL + +     + +     + + +N ++  LCAD + D A D+ L
Sbjct: 94  GILIGCCCSAGRLDLGFAALGHVVKKGFRVEPIIFNPLLKGLCADKRTDDAMDIVL 149


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  194 bits (492), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 198/370 (53%), Gaps = 12/370 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+P+  TY  LI   C  G T  A+ + +EMA         C PN  
Sbjct: 283 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK------ACVPNVH 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +ID LC+EG +++A  +F KM    + P ++T+N+LI+G+C    W  +    + +
Sbjct: 337 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC-KEGWVVSAFQLLSV 395

Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++G  +PN+ ++N +M  LC+  K  +A  LL  ++  G+ P+   YN L+DGFC  G+
Sbjct: 396 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 455

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A  +F SM S G + + F+++ LI+G CK   +E A  +   M+ KGI  D V +  
Sbjct: 456 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 515

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +I + +    LF+ M  +        +  F+D L K+  + EA  +    +++K
Sbjct: 516 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG--KMMK 573

Query: 301 YEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           Y L   +  +  LI+G C++G   ++ ++   + +     +V TY I+I+ LC +G++++
Sbjct: 574 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 633

Query: 359 ARDLFLDMEA 368
           A  +   M +
Sbjct: 634 AETILFSMSS 643



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 191/369 (51%), Gaps = 10/369 (2%)

Query: 1   MEAAALF--MKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           ++AA +F    LR+ FG + +V T   L N  CR      A  +FE+M+         C+
Sbjct: 210 VQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEEN-----CR 262

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN+VTY+ +I GLC+ G +++A +L  +M ++   P+  TY  LI   C     ++A  +
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +   PNV ++ ++++ LC+ GK++EA+ +   M++ G+ P    +N L++G+C 
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 382

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G V  A +L   ME   CK N+ +Y+ L+ G C+  +   A  L   ++  G+ PD V 
Sbjct: 383 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 442

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G  +  Q+  AF +F+ M   G+  D + +   IDGLCK G + +A  +  ++ 
Sbjct: 443 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 502

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LD   +  LIDG CK G+ K    LF ++     +    T+N  + AL  D K++
Sbjct: 503 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 562

Query: 358 KARDLFLDM 366
           +A  +   M
Sbjct: 563 EANAMLGKM 571



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 172/348 (49%), Gaps = 11/348 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLF--EEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           Y T++N LC+ G  + A  +F  + +  G G    VC       T+++   C+   + +A
Sbjct: 197 YRTVVNALCKNGF-VQAAEMFCCKVLRLGFGLDTHVC-------TSLVLANCRRDDLGEA 248

Query: 80  KELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
             +F KM K+EN  PN VTY+ LIHG C A    EA  L  EM+++G QP+  ++ V++ 
Sbjct: 249 FRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIK 308

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
             C  G  D+A ++L+ M      PN   Y  L+D  C  G++  A  +F  M   G   
Sbjct: 309 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP 368

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
            + +++ LINGYCK   +  A  L S M     KP++  YN L  GL  + +  +AF L 
Sbjct: 369 GIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLL 428

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
             +  +G+  D   Y   +DG CK G +  A  +F ++     E D   +  LIDGLCK 
Sbjct: 429 RRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 488

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GRL+ A  +  S+ +  +  D VT+  +I   C  GK      LF +M
Sbjct: 489 GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 536



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 180/358 (50%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++    C PNV TY  LI+ LCR G    A  +F +M         +C P  +
Sbjct: 318 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGII 371

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+G CKEG+V  A +L   M+  N  PN+ TYN L+ G C  +   +A  L   +
Sbjct: 372 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 431

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ V++N++++  CK G+++ A  +   M   G+ P+ F +  L+DG C  GR+
Sbjct: 432 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 491

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +  SM   G   +  +++ LI+G+CK  + +    L+  M+          +N  
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 551

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L + +++  A  +  +M ++G+      +   I+G C+ G    ++++   ++    
Sbjct: 552 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 611

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y  +I+GLC +GR++ A  +  S+    +  +  TY +++ A    G++D+A
Sbjct: 612 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 669



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 11/351 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y+TL+  L +     VA  ++  M N     G       + Y T+++ LCK GFV  A+ 
Sbjct: 162 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLG------GIDYRTVVNALCKNGFVQAAEM 215

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNEL 140
              K+       +     SL+   C  +D  EA  +F +M  ++  +PN V+++++++ L
Sbjct: 216 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGL 275

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+ G+++EA +L + M++ G +P+   Y  L+   C  G  ++A ++   M +  C  NV
Sbjct: 276 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 335

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ILI+  C+  +IE A  ++ +ML  G+ P ++ +N L  G  +   V  AF+L   
Sbjct: 336 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 395

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKS 318
           M++     +   Y   ++GLC+     +A  L R  R++   L  D   YN L+DG CK 
Sbjct: 396 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLR--RVVDNGLLPDRVTYNILVDGFCKE 453

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G+L +A+ +F S+    L  D  T+  +I  LC  G++++A  +   M  K
Sbjct: 454 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 504



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 189/410 (46%), Gaps = 66/410 (16%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYN L++G C+ G   +A N+F  M +   E      P+  T+T +IDGLCK 
Sbjct: 435 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKL 488

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------------------- 106
           G +++A  +   M  + I+ + VT+ +LI G C                           
Sbjct: 489 GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 548

Query: 107 ------YANDW--NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                    D+  NEA  +  +MM  G+ P+VV+  +++   C+ G+   + ++LE M Q
Sbjct: 549 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 608

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN + Y  +++G C  GRV  AE +  SM S G   N F+Y++L+  + K   ++ 
Sbjct: 609 AGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDR 668

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV--ERAFK-------------------L 257
           A  + S M+  G +P+  IY+ L  G    +     RA                     L
Sbjct: 669 AFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCL 728

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL-DIRAYNCLIDGLC 316
            +E+++ GV  +   Y   + GLCK G I+EA +L  T  ++K+ L   +A + +I+  C
Sbjct: 729 SNEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQL--TQDMVKHGLFPDKAISSIIEHYC 785

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K+ +     E  + +     +    +Y  +IH L  +G++ +A+ L  D+
Sbjct: 786 KTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDL 835



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE- 215
           +++GVR   +V       + L GR+ +   + VS +  G         +L+   C++ E 
Sbjct: 83  VELGVRFFKWVCRQSSYCYDLDGRI-QLLGVLVSRDLFGVAQKAV---VLLIQECEDSEN 138

Query: 216 ----IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
               + GAL   +E+   G +     Y+TL + L +++    AF ++  M   G      
Sbjct: 139 GVVKLMGALDGMTEL---GFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 195

Query: 272 AYRTFIDGLCKNGYIVEAVELF--RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
            YRT ++ LCKNG+ V+A E+F  + LR L + LD      L+   C+   L  A+ +F 
Sbjct: 196 DYRTVVNALCKNGF-VQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 253

Query: 330 SLPRGV-LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +      + VTY+I+IH LC  G++++A  L  +M  K
Sbjct: 254 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 118/264 (44%), Gaps = 24/264 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +  FG  PN FTY  L+    + G    A  +   M   NG     C+PN+ 
Sbjct: 633 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK-NG-----CQPNSH 686

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ ++      GFV         + +  I    ++    +     +++ N+  CL  E+
Sbjct: 687 IYSALLS-----GFV---------LSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEI 732

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P    +N ++  LCK G++ EA +L + M++ G+ P+  + +++++ +C T + 
Sbjct: 733 KKCGV-PTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAI-SSIIEHYCKTCKY 790

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
           +   E    +       +  SY  +I+G      ++ A  L S+++   GI+ +V +  +
Sbjct: 791 DNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEEVEVTPS 850

Query: 241 L-FIGLFEIHQVERAFKLFDEMQR 263
           + F+   E    ++  KL   +++
Sbjct: 851 IEFLMKEEEDDPDKCLKLIKAIEQ 874


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 198/370 (53%), Gaps = 12/370 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+P+  TY  LI   C  G T  A+ + +EMA         C PN  
Sbjct: 260 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK------ACVPNVH 313

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +ID LC+EG +++A  +F KM    + P ++T+N+LI+G+C    W  +    + +
Sbjct: 314 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC-KEGWVVSAFQLLSV 372

Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++G  +PN+ ++N +M  LC+  K  +A  LL  ++  G+ P+   YN L+DGFC  G+
Sbjct: 373 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 432

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A  +F SM S G + + F+++ LI+G CK   +E A  +   M+ KGI  D V +  
Sbjct: 433 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 492

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +I + +    LF+ M  +        +  F+D L K+  + EA  +    +++K
Sbjct: 493 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG--KMMK 550

Query: 301 YEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           Y L   +  +  LI+G C++G   ++ ++   + +     +V TY I+I+ LC +G++++
Sbjct: 551 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 610

Query: 359 ARDLFLDMEA 368
           A  +   M +
Sbjct: 611 AETILFSMSS 620



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 191/369 (51%), Gaps = 10/369 (2%)

Query: 1   MEAAALF--MKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           ++AA +F    LR+ FG + +V T   L N  CR      A  +FE+M+         C+
Sbjct: 187 VQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEEN-----CR 239

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN+VTY+ +I GLC+ G +++A +L  +M ++   P+  TY  LI   C     ++A  +
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +   PNV ++ ++++ LC+ GK++EA+ +   M++ G+ P    +N L++G+C 
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 359

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G V  A +L   ME   CK N+ +Y+ L+ G C+  +   A  L   ++  G+ PD V 
Sbjct: 360 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 419

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G  +  Q+  AF +F+ M   G+  D + +   IDGLCK G + +A  +  ++ 
Sbjct: 420 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 479

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LD   +  LIDG CK G+ K    LF ++     +    T+N  + AL  D K++
Sbjct: 480 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 539

Query: 358 KARDLFLDM 366
           +A  +   M
Sbjct: 540 EANAMLGKM 548



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 172/348 (49%), Gaps = 11/348 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLF--EEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           Y T++N LC+ G  + A  +F  + +  G G    VC       T+++   C+   + +A
Sbjct: 174 YRTVVNALCKNGF-VQAAEMFCCKVLRLGFGLDTHVC-------TSLVLANCRRDDLGEA 225

Query: 80  KELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
             +F KM K+EN  PN VTY+ LIHG C A    EA  L  EM+++G QP+  ++ V++ 
Sbjct: 226 FRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIK 285

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
             C  G  D+A ++L+ M      PN   Y  L+D  C  G++  A  +F  M   G   
Sbjct: 286 AKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP 345

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
            + +++ LINGYCK   +  A  L S M     KP++  YN L  GL  + +  +AF L 
Sbjct: 346 GIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLL 405

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
             +  +G+  D   Y   +DG CK G +  A  +F ++     E D   +  LIDGLCK 
Sbjct: 406 RRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKL 465

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           GRL+ A  +  S+ +  +  D VT+  +I   C  GK      LF +M
Sbjct: 466 GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 513



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 180/358 (50%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++    C PNV TY  LI+ LCR G    A  +F +M         +C P  +
Sbjct: 295 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGII 348

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+G CKEG+V  A +L   M+  N  PN+ TYN L+ G C  +   +A  L   +
Sbjct: 349 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 408

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ V++N++++  CK G+++ A  +   M   G+ P+ F +  L+DG C  GR+
Sbjct: 409 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 468

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +  SM   G   +  +++ LI+G+CK  + +    L+  M+          +N  
Sbjct: 469 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 528

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L + +++  A  +  +M ++G+      +   I+G C+ G    ++++   ++    
Sbjct: 529 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 588

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y  +I+GLC +GR++ A  +  S+    +  +  TY +++ A    G++D+A
Sbjct: 589 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 646



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 193/426 (45%), Gaps = 82/426 (19%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYN L++G C+ G   +A N+F  M +   E      P+  T+T +IDGLCK 
Sbjct: 412 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKL 465

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------------------- 106
           G +++A  +   M  + I+ + VT+ +LI G C                           
Sbjct: 466 GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 525

Query: 107 ------YANDW--NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                    D+  NEA  +  +MM  G+ P+VV+  +++   C+ G+   + ++LE M Q
Sbjct: 526 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 585

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN + Y  +++G C  GRV  AE +  SM S G   N F+Y++L+  + K   ++ 
Sbjct: 586 AGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDR 645

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIG---------------------------------- 244
           A  + S M+  G +P+  IY+ L  G                                  
Sbjct: 646 AFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCL 705

Query: 245 ---LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              +F +  V+ A K+ DE+++ GV  +   Y   + GLCK G I+EA +L  T  ++K+
Sbjct: 706 SSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQL--TQDMVKH 762

Query: 302 EL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            L   +A + +I+  CK+ +     E  + +     +    +Y  +IH L  +G++ +A+
Sbjct: 763 GLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQ 822

Query: 361 DLFLDM 366
            L  D+
Sbjct: 823 KLVSDL 828



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 11/351 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y+TL+  L +     VA  ++  M N     G       + Y T+++ LCK GFV  A+ 
Sbjct: 139 YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLG------GIDYRTVVNALCKNGFVQAAEM 192

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNEL 140
              K+       +     SL+   C  +D  EA  +F +M  ++  +PN V+++++++ L
Sbjct: 193 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGL 252

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+ G+++EA +L + M++ G +P+   Y  L+   C  G  ++A ++   M +  C  NV
Sbjct: 253 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 312

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ILI+  C+  +IE A  ++ +ML  G+ P ++ +N L  G  +   V  AF+L   
Sbjct: 313 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 372

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKS 318
           M++     +   Y   ++GLC+     +A  L R  R++   L  D   YN L+DG CK 
Sbjct: 373 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLR--RVVDNGLLPDRVTYNILVDGFCKE 430

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G+L +A+ +F S+    L  D  T+  +I  LC  G++++A  +   M  K
Sbjct: 431 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 481



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE- 215
           +++GVR   +V       + L GR+ +   + VS +  G         +L+   C++ E 
Sbjct: 60  VELGVRFFKWVCRQSSYCYDLDGRI-QLLGVLVSRDLFGVAQKAV---VLLIQECEDSEN 115

Query: 216 ----IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
               + GAL   +E+   G +     Y+TL + L +++    AF ++  M   G      
Sbjct: 116 GVVKLMGALDGMTEL---GFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 172

Query: 272 AYRTFIDGLCKNGYIVEAVELF--RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
            YRT ++ LCKNG+ V+A E+F  + LR L + LD      L+   C+   L  A+ +F 
Sbjct: 173 DYRTVVNALCKNGF-VQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 230

Query: 330 SLPRGV-LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +      + VTY+I+IH LC  G++++A  L  +M  K
Sbjct: 231 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 105/269 (39%), Gaps = 53/269 (19%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +  FG  PN FTY  L+    + G    A  +   M   NG     C+PN+ 
Sbjct: 610 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK-NG-----CQPNSH 663

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL---F 118
            Y+ ++      GFV         + +  I    ++    +     +++ N+  CL    
Sbjct: 664 IYSALLS-----GFV---------LSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHV 709

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             +MD                      +D A ++ + + + GV P   +YN L+ G C  
Sbjct: 710 FRLMD----------------------VDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKE 746

Query: 179 GRVNRAEELFVSMESMGCKHNVF---SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           GR+  A++L   M     KH +F   + S +I  YCK  + +  L     +L     P  
Sbjct: 747 GRIIEADQLTQDM----VKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSF 802

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
             Y  +  GL    +V+ A KL  ++ RH
Sbjct: 803 ASYCWVIHGLRNEGRVQEAQKLVSDLVRH 831


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/370 (30%), Positives = 198/370 (53%), Gaps = 12/370 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+P+  TY  LI   C  G T  A+ + +EMA         C PN  
Sbjct: 217 EAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATK------ACVPNVH 270

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +ID LC+EG +++A  +F KM    + P ++T+N+LI+G+C    W  +    + +
Sbjct: 271 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYC-KEGWVVSAFQLLSV 329

Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++G  +PN+ ++N +M  LC+  K  +A  LL  ++  G+ P+   YN L+DGFC  G+
Sbjct: 330 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQ 389

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A  +F SM S G + + F+++ LI+G CK   +E A  +   M+ KGI  D V +  
Sbjct: 390 LNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTA 449

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +I + +    LF+ M  +        +  F+D L K+  + EA  +    +++K
Sbjct: 450 LIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLG--KMMK 507

Query: 301 YEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           Y L   +  +  LI+G C++G   ++ ++   + +     +V TY I+I+ LC +G++++
Sbjct: 508 YGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEE 567

Query: 359 ARDLFLDMEA 368
           A  +   M +
Sbjct: 568 AETILFSMSS 577



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 191/369 (51%), Gaps = 10/369 (2%)

Query: 1   MEAAALF--MKLRV-FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           ++AA +F    LR+ FG + +V T   L N  CR      A  +FE+M+         C+
Sbjct: 144 VQAAEMFCCKVLRLGFGLDTHVCTSLVLAN--CRRDDLGEAFRVFEKMSKEES-----CR 196

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN+VTY+ +I GLC+ G +++A +L  +M ++   P+  TY  LI   C     ++A  +
Sbjct: 197 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 256

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +   PNV ++ ++++ LC+ GK++EA+ +   M++ G+ P    +N L++G+C 
Sbjct: 257 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCK 316

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G V  A +L   ME   CK N+ +Y+ L+ G C+  +   A  L   ++  G+ PD V 
Sbjct: 317 EGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVT 376

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G  +  Q+  AF +F+ M   G+  D + +   IDGLCK G + +A  +  ++ 
Sbjct: 377 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMV 436

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                LD   +  LIDG CK G+ K    LF ++     +    T+N  + AL  D K++
Sbjct: 437 KKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLN 496

Query: 358 KARDLFLDM 366
           +A  +   M
Sbjct: 497 EANAMLGKM 505



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/346 (32%), Positives = 172/346 (49%), Gaps = 7/346 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y T++N LC+ G  + A  +F       G FG+    +T   T+++   C+   + +A  
Sbjct: 131 YRTVVNALCKNGF-VQAAEMFCCKVLRLG-FGL----DTHVCTSLVLANCRRDDLGEAFR 184

Query: 82  LFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +F KM K+E+  PN VTY+ LIHG C A    EA  L  EM+++G QP+  ++ V++   
Sbjct: 185 VFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAK 244

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C  G  D+A ++L+ M      PN   Y  L+D  C  G++  A  +F  M   G    +
Sbjct: 245 CDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGI 304

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +++ LINGYCK   +  A  L S M     KP++  YN L  GL  + +  +AF L   
Sbjct: 305 ITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRR 364

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           +  +G+  D   Y   +DG CK G +  A  +F ++     E D   +  LIDGLCK GR
Sbjct: 365 VVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGR 424

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L+ A  +  S+ +  +  D VT+  +I   C  GK      LF +M
Sbjct: 425 LEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENM 470



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 180/358 (50%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++    C PNV TY  LI+ LCR G    A  +F +M         +C P  +
Sbjct: 252 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHG-----LC-PGII 305

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+G CKEG+V  A +L   M+  N  PN+ TYN L+ G C  +   +A  L   +
Sbjct: 306 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 365

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D G+ P+ V++N++++  CK G+++ A  +   M   G+ P+ F +  L+DG C  GR+
Sbjct: 366 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 425

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +  SM   G   +  +++ LI+G+CK  + +    L+  M+          +N  
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 485

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L + +++  A  +  +M ++G+      +   I+G C+ G    ++++   ++    
Sbjct: 486 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 545

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             ++  Y  +I+GLC +GR++ A  +  S+    +  +  TY +++ A    G++D+A
Sbjct: 546 SPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRA 603



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 193/426 (45%), Gaps = 82/426 (19%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYN L++G C+ G   +A N+F  M +   E      P+  T+T +IDGLCK 
Sbjct: 369 GLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLE------PDGFTFTALIDGLCKL 422

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFC--------------------------- 106
           G +++A  +   M  + I+ + VT+ +LI G C                           
Sbjct: 423 GRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTF 482

Query: 107 ------YANDW--NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
                    D+  NEA  +  +MM  G+ P+VV+  +++   C+ G+   + ++LE M Q
Sbjct: 483 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 542

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN + Y  +++G C  GRV  AE +  SM S G   N F+Y++L+  + K   ++ 
Sbjct: 543 AGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDR 602

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIG---------------------------------- 244
           A  + S M+  G +P+  IY+ L  G                                  
Sbjct: 603 AFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCL 662

Query: 245 ---LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              +F +  V+ A K+ DE+++ GV  +   Y   + GLCK G I+EA +L  T  ++K+
Sbjct: 663 SSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVVGLCKEGRIIEADQL--TQDMVKH 719

Query: 302 EL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            L   +A + +I+  CK+ +     E  + +     +    +Y  +IH L  +G++ +A+
Sbjct: 720 GLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQ 779

Query: 361 DLFLDM 366
            L  D+
Sbjct: 780 KLVSDL 785



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 11/351 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y+TL+  L +     VA  ++  M N     G       + Y T+++ LCK GFV  A+ 
Sbjct: 96  YSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLG------GIDYRTVVNALCKNGFVQAAEM 149

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNEL 140
              K+       +     SL+   C  +D  EA  +F +M  ++  +PN V+++++++ L
Sbjct: 150 FCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGL 209

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+ G+++EA +L + M++ G +P+   Y  L+   C  G  ++A ++   M +  C  NV
Sbjct: 210 CEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNV 269

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ILI+  C+  +IE A  ++ +ML  G+ P ++ +N L  G  +   V  AF+L   
Sbjct: 270 HTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSV 329

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKS 318
           M++     +   Y   ++GLC+     +A  L R  R++   L  D   YN L+DG CK 
Sbjct: 330 MEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLR--RVVDNGLLPDRVTYNILVDGFCKE 387

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G+L +A+ +F S+    L  D  T+  +I  LC  G++++A  +   M  K
Sbjct: 388 GQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 438



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 106/221 (47%), Gaps = 17/221 (7%)

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE- 215
           +++GVR   +V       + L GR+ +   + VS +  G         +L+   C++ E 
Sbjct: 17  VELGVRFFKWVCRQSSYCYDLDGRI-QLLGVLVSRDLFGVAQKAV---VLLIQECEDSEN 72

Query: 216 ----IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
               + GAL   +E+   G +     Y+TL + L +++    AF ++  M   G      
Sbjct: 73  GVVKLMGALDGMTEL---GFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGI 129

Query: 272 AYRTFIDGLCKNGYIVEAVELF--RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
            YRT ++ LCKNG+ V+A E+F  + LR L + LD      L+   C+   L  A+ +F 
Sbjct: 130 DYRTVVNALCKNGF-VQAAEMFCCKVLR-LGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 187

Query: 330 SLPR-GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + +      + VTY+I+IH LC  G++++A  L  +M  K
Sbjct: 188 KMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 63/269 (23%), Positives = 105/269 (39%), Gaps = 53/269 (19%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +  FG  PN FTY  L+    + G    A  +   M   NG     C+PN+ 
Sbjct: 567 EAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK-NG-----CQPNSH 620

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL---F 118
            Y+ ++      GFV         + +  I    ++    +     +++ N+  CL    
Sbjct: 621 IYSALLS-----GFV---------LSNTAIGARALSSTGDLDARSLSSEENDNNCLSSHV 666

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             +MD                      +D A ++ + + + GV P   +YN L+ G C  
Sbjct: 667 FRLMD----------------------VDHALKIRDEIKKCGV-PTEDLYNFLVVGLCKE 703

Query: 179 GRVNRAEELFVSMESMGCKHNVF---SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           GR+  A++L   M     KH +F   + S +I  YCK  + +  L     +L     P  
Sbjct: 704 GRIIEADQLTQDM----VKHGLFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSF 759

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
             Y  +  GL    +V+ A KL  ++ RH
Sbjct: 760 ASYCWVIHGLRNEGRVQEAQKLVSDLVRH 788


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 189/365 (51%), Gaps = 11/365 (3%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            ++  ++  G EPNVFTYN L+  LC+      A  L  EM++        C P+ V+YT
Sbjct: 167 PIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG------CDPDEVSYT 220

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I  LCK G V +A+EL +     +  P+V  YN+LI+G C    + EA  L  EMM++
Sbjct: 221 TLISSLCKLGKVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNK 275

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PNV+S+  I+N L   G ++ +  +L  M   G  PN   + +L+ GF L G  + A
Sbjct: 276 GIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            + +  M   G   NV +Y+ L++G C  + +  A+S++++M   G  P+V  Y+ L  G
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   ++ A ++++ M  HG   +  AY   +D LC+N    +A  L   +++     +
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              +N  I GLC SGR+  A ++F  +       +  TYN ++ +L  D +  +A  L  
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515

Query: 365 DMEAK 369
           DME +
Sbjct: 516 DMEHR 520



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 177/358 (49%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +PNV +Y T+IN L   G+  ++L +  +M      F   C PN  
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM------FARGCSPNLH 317

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T++I G   +G   +A + + +M  E + PNVV YN+L+HG C      +A  +F +M
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PNV +++ +++   K G +D AS +   MI  G  PN   Y  ++D  C     
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A  L  +M+   C  N  +++  I G C +  ++ A+ ++ +M + G  P+   YN L
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +   AF L  +M+  G+  +   Y T I G C  G + EA+EL   + +   
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + D    N +ID  CK G++ IA +L   L  G    D++ Y  +I  +C    +++A
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEA 615



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 186/390 (47%), Gaps = 24/390 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI----VALNLFEEMANGNGEFGVVCK- 57
           A  L +++   GC+P+  +Y TLI+ LC+ G       +A++    +   N     VCK 
Sbjct: 200 AHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKE 259

Query: 58  -------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY 98
                              PN ++YTTII+ L   G V+ +  +  KM     +PN+ T+
Sbjct: 260 YTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
            SLI GF      +EA   +  M+ +GV PNVV++N +M+ LC    + +A  +   M  
Sbjct: 320 TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN   Y+ L+DG+   G ++ A E++  M + GC  NV +Y+ +++  C+N     
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L   M  +   P+ V +NT   GL    +V+ A K+FD+M   G   +T  Y   +D
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLD 499

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            L K+    EA  L + +     EL++  YN +I G C +G L  A EL   +       
Sbjct: 500 SLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           D +T NI+I A C  GK++ A  L   + A
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 171/362 (47%), Gaps = 13/362 (3%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           MKL    C  ++F   ++I    R G +  AL  F  M     +F V  KP    Y  I+
Sbjct: 102 MKLEGISCSEDLFI--SVIGSYRRAGSSEQALKTFYRMQ----DFRV--KPTVKIYNHIL 153

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           D L  E        ++  MK + + PNV TYN L+   C  N  + A  L +EM  +G  
Sbjct: 154 DALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCD 213

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+ VS+  +++ LCK GK+ EA  L      +   P+  VYN L++G C       A +L
Sbjct: 214 PDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQL 268

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M + G   NV SY+ +IN       +E +L++ ++M ++G  P++  + +L  G F 
Sbjct: 269 LDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFL 328

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
                 A   +D M R GV  +  AY   + GLC    + +AV +F  + I     ++R 
Sbjct: 329 KGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRT 388

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y+ LIDG  K+G L  A E++  +       +VV Y  M+  LC +   ++A  L  +M+
Sbjct: 389 YSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQ 448

Query: 368 AK 369
            +
Sbjct: 449 VE 450



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 8/303 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  PNV  YN L++GLC       A+++F +M  NG       C PN  TY+ +IDG  K
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING-------CCPNVRTYSALIDGYAK 398

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D A E++  M     +PNVV Y  ++   C  + +N+A CL   M  +   PN V+
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN  +  LC +G++D A ++ + M   G  PN   YN L+D      R   A  L   ME
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + N+ +Y+ +I GYC    +  AL L  +M+ +G KPD +  N +     +  +V 
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L D +       D  AY + I G+C +  + EA+   R +       ++  +N L+
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638

Query: 313 DGL 315
             L
Sbjct: 639 RHL 641



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 140/282 (49%), Gaps = 6/282 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F ++ + GC PNV TY+ LI+G  + G    A  ++  M          C PN V
Sbjct: 369 DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG------CHPNVV 422

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++D LC+    ++A  L   M+ EN  PN VT+N+ I G C +   + A  +F +M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PN  ++N +++ L K+ +  EA  L++ M   G+  N   YNT++ G+C  G +
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M   G K +  + +I+I+ YCK  ++  A+ L   + +    PD++ Y +L
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             G+     VE A      M   G++ +   +   +  L  N
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSN 644



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 154/331 (46%), Gaps = 10/331 (3%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           +AL  F+ +AN         K   +TY  +I+ L  E  +D  + L  +MK E I+ +  
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
            + S+I  +  A    +A   F  M D  V+P V  +N I++ L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            + G+ PN F YN L+   C   RV+ A +L V M S GC  +  SY+ LI+  CK  ++
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A       L+    P V +YN L  G+ + +  E AF+L DEM   G+  +  +Y T 
Sbjct: 233 KEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I+ L   G +  ++ +   +       ++  +  LI G    G    A + +  + R  +
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + +VV YN ++H LC+   +  A  +F  ME
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQME 378



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 118/231 (51%), Gaps = 6/231 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   ++V  C PN  T+NT I GLC +G    A+ +F++M N        C PNT 
Sbjct: 439 QAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSG------CFPNTT 492

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++D L K+    +A  L   M+   I  N+VTYN++I+G+C A    EA  L  +M
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +P+ ++ N++++  CK GK++ A +L++ +      P+   Y +L+ G C    V
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             A      M S G   NV ++++L+     N    GA+     +L  G +
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663



 Score = 89.4 bits (220), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 5/239 (2%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           +++ +++ +L    +MD    LL+ M   G+  +  ++ +++  +   G   +A + F  
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M+    K  V  Y+ +++        +    +YS M   G++P+V  YN L   L + ++
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A KL  EM   G   D  +Y T I  LCK G + EA EL      + +   +  YN 
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNA 251

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI+G+CK    + A++L   +    +  +V++Y  +I+AL   G ++ +  +   M A+
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFAR 310



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 70/142 (49%)

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           SK  K   + Y  +   L    +++    L  +M+  G++     + + I    + G   
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A++ F  ++  + +  ++ YN ++D L    R ++   ++ ++ +  +  +V TYNI++
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 348 HALCADGKMDKARDLFLDMEAK 369
            ALC + ++D A  L ++M +K
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSK 210


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  194 bits (492), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/390 (30%), Positives = 184/390 (47%), Gaps = 41/390 (10%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L + +   G  P+++ +NT +N LCR      AL LF  M +   +      P+ V+YT
Sbjct: 105 SLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRD------PDVVSYT 158

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINP------------------------------- 93
            IID LC     D+A +++ ++ D+ ++P                               
Sbjct: 159 IIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKG 218

Query: 94  ----NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
               N + YN+LI GFC     ++A  +   M   G  P++V++N+++N  C+ G +DEA
Sbjct: 219 GVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEA 278

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
            RL+E M + GV P+ + YN L+ GFC    V+RA  + V         +V SY+ +I  
Sbjct: 279 VRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITA 338

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +CK +       L+ EM  KGI+PD+V +N L              KL DEM +  V  D
Sbjct: 339 FCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPD 398

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   +D LCKNG +  A  +FR +       D+ +YN L++G CK+ R+  A  LF 
Sbjct: 399 CIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFD 458

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +    L  D VTY +++  L    K+  A
Sbjct: 459 EMQSKGLYPDEVTYKLIVGGLIRGKKISLA 488



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/305 (29%), Positives = 151/305 (49%), Gaps = 6/305 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + N   YN LI+G CR G    A+ +   M+         C P+ VTY  +++  C+E
Sbjct: 219 GVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTG------CVPDLVTYNILLNYCCEE 272

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD+A  L   M+   + P++ +YN L+ GFC AN  + A  + +E M      +VVS+
Sbjct: 273 GMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSY 332

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++   CK  +  +   L E M   G+RP+   +N L+D F   G  +  ++L   M  
Sbjct: 333 NTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTK 392

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           M    +   Y+ +++  CKN +++ A S++ +M+  G+ PDV+ YN L  G  +  +V  
Sbjct: 393 MRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMD 452

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LFDEMQ  G+  D   Y+  + GL +   I  A  ++  +    + L+      L++
Sbjct: 453 AMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVN 512

Query: 314 GLCKS 318
            +  S
Sbjct: 513 AIQSS 517



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 4/286 (1%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M   +I  + + Y S I     A   N+A  LF +M +   +   V +N  +  L ++ +
Sbjct: 1   MYQSSIGAHRLAYRSQISKLVKAGLINQAIYLFDQMTESNCRVFSVDYNRFIGVLLRHSR 60

Query: 146 MDEASRLLEL-MIQIGVRPNAFVYNTLMDGFC-LTGRVNRA--EELFVSMESMGCKHNVF 201
           +  A       +I  G     F Y+  +   C     +N      L + M+S+G   +++
Sbjct: 61  LHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIW 120

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +++  +N  C+   +E AL L+  M SKG  PDVV Y  +   L    + + A K++  +
Sbjct: 121 AFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRL 180

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
              G++ D  A    + GLC  G +  A EL   +     +++   YN LIDG C+ GR+
Sbjct: 181 IDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRV 240

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             A ++   + R   + D+VTYNI+++  C +G +D+A  L   ME
Sbjct: 241 DKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETME 286


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  193 bits (491), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/349 (32%), Positives = 177/349 (50%), Gaps = 23/349 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF +++  G  P+V+TY TL++  C+ G    A N F+EM          C PN V
Sbjct: 140 KAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDG------CAPNVV 193

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I    K   + +A E+F  M      PN+VTY +LI G C A +  +A  ++  M
Sbjct: 194 TYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARM 253

Query: 122 MDQGV-----------------QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            +  V                 +PNVV++  +++ LCK  K+ EA  LLE M   G  PN
Sbjct: 254 KNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPN 313

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             +Y+ L+DGFC  G+++ A+E+F  M   GC  NV++YS LI+   K+K ++ AL + +
Sbjct: 314 QIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLT 373

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +ML     P+VVIY  +  GL ++ + + A++L   M+  G   +   Y   IDG  K G
Sbjct: 374 KMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAG 433

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            +   +EL + +       +   Y  LI+  C +G L  A +L   + +
Sbjct: 434 RVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQ 482



 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 184/368 (50%), Gaps = 23/368 (6%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TY+ +I  LC       A  LF+EM   NG       P+  TYTT++D  CK G +
Sbjct: 120 PDSSTYSKVIGYLCNASKVEKAFQLFQEMKR-NG-----ITPDVYTYTTLLDRFCKVGLI 173

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A+  F +M+ +   PNVVTY +LIH +      + A  +F  M+  G  PN+V++  +
Sbjct: 174 EQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTAL 233

Query: 137 MNELCKNGKMDEASRLLELM---------IQIGVR--------PNAFVYNTLMDGFCLTG 179
           ++  CK G+ ++A ++   M         + I  R        PN   Y  L+DG C   
Sbjct: 234 IDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAH 293

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V  A +L  +M   GC+ N   Y  LI+G+CK  +++ A  ++++ML  G  P+V  Y+
Sbjct: 294 KVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYS 353

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L   LF+  +++ A K+  +M  +  A +   Y   +DGLCK G   EA  L   +   
Sbjct: 354 SLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEK 413

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               ++  Y  +IDG  K+GR+    EL + +       + +TY ++I+  CA G +D A
Sbjct: 414 GCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDA 473

Query: 360 RDLFLDME 367
             L  +M+
Sbjct: 474 HKLLEEMK 481



 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/367 (32%), Positives = 185/367 (50%), Gaps = 14/367 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-------FGVV----CKPNTVT 62
           GC PN+ TY  LI+G C+ G T  A  ++  M N   +       F +V     +PN VT
Sbjct: 222 GCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVT 281

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++DGLCK   V +A++L   M  E   PN + Y++LI GFC     +EA+ +F +M+
Sbjct: 282 YGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKML 341

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  PNV +++ ++++L K+ ++D A ++L  M++    PN  +Y  ++DG C  G+ +
Sbjct: 342 GHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTD 401

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L + ME  GC  NV +Y+ +I+G+ K   ++  L L   M SKG  P+ + Y  L 
Sbjct: 402 EAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLI 461

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
                   ++ A KL +EM++         YR  I+G       V ++ L   L      
Sbjct: 462 NHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHE--FVASLGLLAELSEDGSV 519

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  Y  LID   K+GRL++A EL   L      A   TY  +I +L    K+DKA  L
Sbjct: 520 PILPVYKLLIDNFIKAGRLEMALELHEEL-SSFSAAYQNTYVSLIESLTLACKVDKAFKL 578

Query: 363 FLDMEAK 369
           + DM  +
Sbjct: 579 YSDMTRR 585



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 183/386 (47%), Gaps = 21/386 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGH--TIVALNLFEEMANGNGEFGVVCKPNT 60
           A  L  K+ + G +P    YN LI G+C T    ++  + L E   N   E GVV   N 
Sbjct: 30  AYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYNEMLEMGVVL--NK 87

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V        LC  G  +KA  +  +M  +   P+  TY+ +I   C A+   +A  LF E
Sbjct: 88  VNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQE 147

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+V ++  +++  CK G +++A    + M Q G  PN   Y  L+  +  T +
Sbjct: 148 MKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRK 207

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--------- 231
           ++RA E+F  M S GC  N+ +Y+ LI+G+CK  E E A  +Y+ M +  +         
Sbjct: 208 LSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYF 267

Query: 232 --------KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
                   +P+VV Y  L  GL + H+V+ A  L + M   G   +   Y   IDG CK 
Sbjct: 268 RIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKV 327

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G + EA E+F  +       ++  Y+ LID L K  RL +A ++   +       +VV Y
Sbjct: 328 GKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIY 387

Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
             M+  LC  GK D+A  L L ME K
Sbjct: 388 TEMVDGLCKVGKTDEAYRLMLMMEEK 413



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 154/344 (44%), Gaps = 73/344 (21%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EPNV TY  L++GLC+      A +L E M+         C+PN + Y  +IDG CK G 
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEG------CEPNQIIYDALIDGFCKVGK 329

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A+E+F KM     +PNV TY+SLI         + A  +  +M++    PNVV +  
Sbjct: 330 LDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTE 389

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCK GK DEA RL+ +M + G  PN   Y  ++DGF   GRV+R  EL   M S G
Sbjct: 390 MVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKG 449

Query: 196 CKHNVFSYSILINGYCK--------------------------NKEIEG-------ALSL 222
           C  N  +Y +LIN  C                            K IEG       +L L
Sbjct: 450 CAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGL 509

Query: 223 YSEMLSKGIKPDVVIYNTL---FIGL------FEIHQ----------------------- 250
            +E+   G  P + +Y  L   FI         E+H+                       
Sbjct: 510 LAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLA 569

Query: 251 --VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
             V++AFKL+ +M R G   +       I GL + G   EA++L
Sbjct: 570 CKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/304 (30%), Positives = 140/304 (46%), Gaps = 43/304 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+   GC PNV+TY++LI+ L +     +AL +  +M   +      C PN V
Sbjct: 332 EAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENS------CAPNVV 385

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++DGLCK G  D+A  L L M+++   PNVVTY ++I GF  A   +    L   M
Sbjct: 386 IYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLM 445

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---------------------- 159
             +G  PN +++ V++N  C  G +D+A +LLE M Q                       
Sbjct: 446 TSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVA 505

Query: 160 -----------GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
                      G  P   VY  L+D F   GR+  A EL   + S    +   +Y  LI 
Sbjct: 506 SLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIE 564

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD---EMQRHG 265
                 +++ A  LYS+M  +G  P++ +   L  GL  + + E A +L D   +M  H 
Sbjct: 565 SLTLACKVDKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDIHW 624

Query: 266 VAAD 269
           V  +
Sbjct: 625 VQQE 628



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 84/339 (24%), Positives = 154/339 (45%), Gaps = 58/339 (17%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN-- 143
           M  E   P+ + +NSL+H +C + D+  A  L  +M+  G QP  V +N+++  +C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 144 ---------------------------------------GKMDEASRLLELMIQIGVRPN 164
                                                  GK ++A  ++  M+  G  P+
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
           +  Y+ ++   C   +V +A +LF  M+  G   +V++Y+ L++ +CK   IE A + + 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           EM   G  P+VV Y  L     +  ++ RA ++F+ M  +G   +   Y   IDG CK G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 285 YIVEAVELFRTL--------------RILKYEL---DIRAYNCLIDGLCKSGRLKIAWEL 327
              +A +++  +              RI+  EL   ++  Y  L+DGLCK+ ++K A +L
Sbjct: 242 ETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDL 301

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             ++       + + Y+ +I   C  GK+D+A+++F  M
Sbjct: 302 LETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKM 340



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 124/253 (49%), Gaps = 6/253 (2%)

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G  P+ + FN +++  C++G    A +LL+ M+  G +P   VYN L+ G C T  
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 181 ------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
                 +  AE  +  M  MG   N  +        C   + E A ++  EM+SKG  PD
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPD 121

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
              Y+ +   L    +VE+AF+LF EM+R+G+  D + Y T +D  CK G I +A   F 
Sbjct: 122 SSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFD 181

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++      ++  Y  LI    K+ +L  A E+F  +     + ++VTY  +I   C  G
Sbjct: 182 EMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAG 241

Query: 355 KMDKARDLFLDME 367
           + +KA  ++  M+
Sbjct: 242 ETEKACQIYARMK 254


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 187/357 (52%), Gaps = 8/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+ TYN +++GLC+ G       ++E M   N       +P+ +TY  +I GLC+ 
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN------LQPDVITYGILIHGLCRS 312

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A  ++ ++    +  +   YNSL+ GFC A    EA   +      G++ N+ ++
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTY 371

Query: 134 NVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           N+++  L  +G +DEA  L +L+ + +   P+   + TL+ G C  G  N+A  +F    
Sbjct: 372 NIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEAR 431

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + +VFSYS +ING C    +  A+ +Y +M   G KP+  IYN L  G  ++++  
Sbjct: 432 VSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS 491

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +++ +M  +G +     Y T IDGLCK     EA  + R +    +  DI  Y  LI
Sbjct: 492 DAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            GL    ++  A  +++ +    L  DV+ +NI+IH LC+ GK+D+A  +F DM+ K
Sbjct: 552 RGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608



 Score =  190 bits (483), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 192/381 (50%), Gaps = 30/381 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE---------------MA 46
           E   ++ ++     +P+V TY  LI+GLCR+G    A  ++ E               + 
Sbjct: 282 EVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLV 341

Query: 47  NGNGEFGVVCKP-------------NTVTYTTIIDGLCKEGFVDKAKELF-LKMKDENIN 92
            G  + G V +              N  TY  +I GL   G VD+A EL+ L  KD    
Sbjct: 342 KGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACI 401

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ VT+ +LIHG C     N+A  +F E    G Q +V S++ ++N LC  G++ +A ++
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
            E M + G +PN+ +YN L+ GFC   R + A  ++  M   GC   V +Y+ LI+G CK
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCK 521

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
            ++ + A S+  EM+  G  PD+  Y +L  GLF   +++ A  ++ ++   G+  D   
Sbjct: 522 AEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMM 581

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKY-ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           +   I GLC  G + EA+ +F  ++  K    ++  YN L+DGL ++G +  A  L+ S+
Sbjct: 582 HNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSI 641

Query: 332 PRGVLIADVVTYNIMIHALCA 352
               L  D+++YN  I  LC+
Sbjct: 642 TEDGLEPDIISYNTRIKGLCS 662



 Score =  181 bits (460), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 183/376 (48%), Gaps = 38/376 (10%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           + GC P + ++N L++   R      A   F  +++G   FG    PN  TY  ++  LC
Sbjct: 112 ILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG--AFGRRIAPNLQTYNIVLRSLC 169

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
             G +D+A  LF  ++   + P+ +TY++L+ G    +  + A  L  EM    VQP+VV
Sbjct: 170 ARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVV 229

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            +N ++    K G+ ++  R+ + +++  G RPN   YN ++DG C  GR     E++  
Sbjct: 230 CYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M +   + +V +Y ILI+G C++ +++GA  +YSE++  G+  D  +YN+L  G  +  +
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349

Query: 251 VERAFKLFDEMQRHGVA-----------------------------------ADTWAYRT 275
           V+ A+K +D     G+                                     DT  + T
Sbjct: 350 VQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I GLC+NG+  +A  +F   R+   +LD+ +Y+ +I+GLC  GRL  A +++  + +  
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 336 LIADVVTYNIMIHALC 351
              +   YN +I   C
Sbjct: 470 CKPNSHIYNALISGFC 485



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 182/341 (53%), Gaps = 8/341 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N+ TYN +I GL  +G    A+ L++ +     E  V C P+TVT+ T+I GLC+ GF +
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFAN 421

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA  +F + +      +V +Y+S+I+G C      +A  ++ +M   G +PN   +N ++
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  C+  +  +A R+   M   G  P    YNTL+DG C   +   A  +   M   G  
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ +Y  LI G   +K+I+ ALS++ ++L KG+K DV+++N L  GL    +V+ A  +
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 258 FDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           F +M ++     +   Y T +DGL + GYI +A  L+ ++     E DI +YN  I GLC
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLC 661

Query: 317 KSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKM 356
              R+    +L    L RG+ I  V+T+NI++ A+   G +
Sbjct: 662 SCDRIHEGIQLLDEVLSRGI-IPTVITWNILVRAVIKYGPI 701



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 193/368 (52%), Gaps = 11/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF  LR     P+  TY+TL+ GL +      AL+L +EM           +P+ V
Sbjct: 176 RAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSR------VQPDVV 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            Y  ++ G  K G  +K   ++ K+ KD    PN+ TYN ++ G C    + E   ++  
Sbjct: 230 CYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   +QP+V+++ ++++ LC++G +D A+R+   +I+ G+  +A +YN+L+ GFC  GR
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--PDVVIY 238
           V  A + + S    G + N+ +Y+I+I G   +  ++ A+ L+ ++L K +   PD V +
Sbjct: 350 VQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTF 407

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  GL +     +AF +F+E +  G   D ++Y + I+GLC  G +V+AV+++  +  
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +   YN LI G C+  R   A  ++  +        V+TYN +I  LC   K  +
Sbjct: 468 DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQE 527

Query: 359 ARDLFLDM 366
           A  +  +M
Sbjct: 528 ASSVAREM 535



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 157/286 (54%), Gaps = 7/286 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F + RV G + +VF+Y+++INGLC  G  + A+ ++E+M + +G     CKPN+ 
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM-DKDG-----CKPNSH 475

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C+      A  ++ KM D   +P V+TYN+LI G C A  + EA  +  EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P++ ++  ++  L  + K+D+A  + + ++  G++ +  ++N L+ G C  G+V
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + A  +F  M E   C  N+ +Y+ L++G  +   I+ A +L++ +   G++PD++ YNT
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
              GL    ++    +L DE+   G+      +   +  + K G I
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 139/253 (54%), Gaps = 7/253 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  ++ K+   GC+PN   YN LI+G C+   T  A+ ++ +MA+ NG     C P  
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD-NG-----CSPTV 509

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+IDGLCK     +A  +  +M +    P++ TY SLI G       ++A  ++ +
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQ 569

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI-GVRPNAFVYNTLMDGFCLTG 179
           ++ +G++ +V+  N++++ LC  GK+DEA  +   M +     PN   YNTLMDG   TG
Sbjct: 570 ILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETG 629

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +++A  L+ S+   G + ++ SY+  I G C    I   + L  E+LS+GI P V+ +N
Sbjct: 630 YIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689

Query: 240 TLFIGLFEIHQVE 252
            L   + +   ++
Sbjct: 690 ILVRAVIKYGPIQ 702



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 114/240 (47%), Gaps = 5/240 (2%)

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ--IGVR--PNAFVYNTLMDGFCLTGR 180
           G  P + S N +++   +  +  +A      +     G R  PN   YN ++   C  G 
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++RA  LF S+       +  +YS L+ G  K   ++ AL L  EM    ++PDVV YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNA 233

Query: 241 LFIGLFEIHQVERAFKLFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L  G F+  + E+  +++D++ +  G   +   Y   +DGLCK G   E  E++  +   
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+  Y  LI GLC+SG +  A  ++  + +  L+ D   YN ++   C  G++ +A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/384 (32%), Positives = 184/384 (47%), Gaps = 47/384 (12%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV TY  LI+G CR+G    AL L   M            P+T TY T++ GLC     +
Sbjct: 186 NVVTYTALIDGYCRSGRLTDALRLIASMPVA---------PDTYTYNTVLKGLCFAKQWE 236

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+EL  +M   N +PN VT+ + I  FC     + A  L  +M   G  P+VV ++ ++
Sbjct: 237 EAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLV 296

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N   ++G++D+A +LL  M+    RPN   YN  + G C+ GR +   EL   M    C 
Sbjct: 297 NGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCP 353

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  ++S LIN  C+N+  E A+ +  +M   G  PDVV YNT+     E    + A KL
Sbjct: 354 PNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKL 413

Query: 258 FDEM-------------------QRHGVAADTWA-------------YRTFIDGLCKNGY 285
            + M                   +R   AA+  A             +   ID LC+NG 
Sbjct: 414 LNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQ 473

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           + +A+E+F  +   +   DI  Y+ LI+G  + G  K+A++LFRS+P     AD+ +YN 
Sbjct: 474 VKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNA 530

Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
            +  LC   + D A +L  DM  K
Sbjct: 531 TLKGLCMAARWDDAGELIADMVTK 554



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 184/365 (50%), Gaps = 15/365 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++    C PN  T+ T I   C+ G    A+ L E+M     ++G  C P+ V
Sbjct: 237 EAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMP----KYG--CMPDVV 290

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+T+++G  + G VD A +L   M      PN V YN+ + G C A  W+E   L  EM
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEM 347

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN  +F+ ++N LC+N   + A  +LE M + G  P+   YNT++  F      
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACA 407

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L   + SM CK +  S++ ++   C+ +    A  L ++ML +    + + +N L
Sbjct: 408 DDALKL---LNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNIL 464

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  QV+ A ++F+ M ++    D   Y + I+G  + G    A +LFR+   +  
Sbjct: 465 IDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRS---MPC 521

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI +YN  + GLC + R   A EL   +     + + VT+NI+I++LC  G +++A +
Sbjct: 522 RADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIE 581

Query: 362 LFLDM 366
           ++  M
Sbjct: 582 VYEQM 586



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 171/358 (47%), Gaps = 15/358 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  ++  +GC P+V  Y+TL+NG    G    AL L   M         +C+PNTV
Sbjct: 272 RAVELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTM---------LCRPNTV 322

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   + GLC  G  D+  EL  +M  ++  PN  T+++LI+  C       A  +  +M
Sbjct: 323 CYNAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM 382

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VVS+N I++   +    D+A +LL  M+    +P+   +N ++   C   R 
Sbjct: 383 QKYGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERW 439

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M    C  N  +++ILI+  C+N +++ A+ ++  M      PD+V Y++L
Sbjct: 440 YDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSL 499

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  E    + AF LF  M      AD ++Y   + GLC      +A EL   +     
Sbjct: 500 INGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDC 556

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +   +N LI+ LC+ G +  A E++  +P+  +  D+ TYN +I+     G +D A
Sbjct: 557 LPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDA 614



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 180/342 (52%), Gaps = 15/342 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L  ++    C PN  T++TLIN LC+      A+ + E+M     ++G +  P+ V
Sbjct: 339 EVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQ----KYGYM--PDVV 392

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y TII    ++   D A +L   M      P+ +++N+++   C A  W +A  L  +M
Sbjct: 393 SYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKM 449

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +    N ++FN++++ LC+NG++ +A  + ELM +    P+   Y++L++GF   G  
Sbjct: 450 LKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLD 509

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF    SM C+ ++FSY+  + G C     + A  L ++M++K   P+ V +N L
Sbjct: 510 KVAFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNIL 566

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +   V RA +++++M ++G+  D + Y   I+G  + G + +A++   T   +  
Sbjct: 567 INSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLST---MPC 623

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           E D  +YN ++ GLC++ R K A +L   + R     + VT+
Sbjct: 624 EPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 132/245 (53%), Gaps = 15/245 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA L  K+    C  N  T+N LI+ LC+ G    A+ +FE M          C P+ V
Sbjct: 441 DAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYR------CTPDIV 494

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I+G  ++G    A +LF  M       ++ +YN+ + G C A  W++A  L  +M
Sbjct: 495 TYSSLINGFSEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADM 551

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN V+FN+++N LC+ G ++ A  + E M + G+ P+ F YN L++G+   G +
Sbjct: 552 VTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCL 611

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY--- 238
           + A +    + +M C+ +  SY+ ++ G C+ +  + A  L +EML K   P+ V +   
Sbjct: 612 DDALKF---LSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYA 668

Query: 239 NTLFI 243
           N LFI
Sbjct: 669 NQLFI 673



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 124/242 (51%), Gaps = 8/242 (3%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P V++ N+++ +LC   ++ +A R+LE +   G   +A  +NTL+ G+C  G +  AE +
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
             +  + G   NV +Y+ LI+GYC++  +  AL L + M    + PD   YNT+  GL  
Sbjct: 176 LEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLKGLCF 231

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             Q E A +L  EM R+    +   + T I   C+NG +  AVEL   +       D+  
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y+ L++G  + GR+  A +L  ++   +   + V YN  +  LC  G+ D+  +L  +M 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTM---LCRPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 368 AK 369
            K
Sbjct: 349 RK 350


>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 189/349 (54%), Gaps = 6/349 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
            ++++  +G  PNV+ +N L++G C+ G  + A  +F+E++          +P+ V++ T
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRG------LRPSVVSFNT 266

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G C+   V++   L   M+ E I+P+V TY++LI+G C  +   EA  LF EM + G
Sbjct: 267 LISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMG 326

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PN V+F  +++  CK+GK+D A R  E+M   G+RP+   YN L++G C  G +  A 
Sbjct: 327 LVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEAR 386

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   M   G K +  +++ L++G CK+ +++ AL +   M+ +GI+ D V +  L  GL
Sbjct: 387 KLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGL 446

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +V  A ++  +M   G   D   Y   ID  CK G +    +L + ++       +
Sbjct: 447 CRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGV 506

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             YN L++G CK G++K A  L  ++    ++ + +T+NI++   C  G
Sbjct: 507 VTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHG 555



 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 175/313 (55%), Gaps = 3/313 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN   +  ++ G CK G V  A+ +F ++    + P+VV++N+LI G+C + +  E   L
Sbjct: 224 PNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVL 283

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M  + + P+V +++ ++N LCK  +++EA+ L + M ++G+ PN   + TL+DG C 
Sbjct: 284 KSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCK 343

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+++ A   F  M+  G + ++ +Y+ LING C++ +++ A  L +EM+  G KPD + 
Sbjct: 344 HGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKIT 403

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           + TL  G  +   ++ A ++ D M   G+  D  A+   I GLC++G + +A  + + + 
Sbjct: 404 FTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDML 463

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              ++ D   Y  +ID  CK G +K+  +L + + R   +  VVTYN +++  C  G+M 
Sbjct: 464 SAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMK 523

Query: 358 KARDLF---LDME 367
            A+ L    L+ME
Sbjct: 524 NAKMLLHAMLNME 536



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 102/273 (37%), Positives = 151/273 (55%), Gaps = 6/273 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+VFTY+ LINGLC+      A  LF+EM     E G+V  PN VT+TT+IDG CK G 
Sbjct: 293 SPDVFTYSALINGLCKESRVEEANGLFDEMC----EMGLV--PNGVTFTTLIDGQCKHGK 346

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F  MKD  I P+++TYN+LI+G C   D  EA+ L  EM+  G +P+ ++F  
Sbjct: 347 IDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTT 406

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +M+  CK+G MD A  + + M++ G+  +   +  L+ G C  GRV  AE +   M S G
Sbjct: 407 LMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAG 466

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            K +  +Y+++I+ +CK  +++    L  EM   G  P VV YN L  G  +  Q++ A 
Sbjct: 467 HKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAK 526

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            L   M    V  +   +   +DG CK+G  V+
Sbjct: 527 MLLHAMLNMEVVPNDITFNILLDGHCKHGSSVD 559



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 132/250 (52%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            ++E++D G  PNV  FN++M+  CK G +  A  + + + + G+RP+   +NTL+ G+C
Sbjct: 213 FYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYC 272

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            +  V     L   MES     +VF+YS LING CK   +E A  L+ EM   G+ P+ V
Sbjct: 273 RSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGV 332

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            + TL  G  +  +++ A + F+ M+  G+  D   Y   I+GLC++G + EA +L   +
Sbjct: 333 TFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDLKEARKLLNEM 392

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
               ++ D   +  L+DG CK G +  A E+   +    +  D V +  +I  LC DG++
Sbjct: 393 IGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTALISGLCRDGRV 452

Query: 357 DKARDLFLDM 366
             A  +  DM
Sbjct: 453 RDAERMLKDM 462



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 154/277 (55%), Gaps = 9/277 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  PN  T+ TLI+G C+ G   +AL  FE M +     G+  +P+ +
Sbjct: 314 EANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDR----GI--RPDLI 367

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLC++G + +A++L  +M      P+ +T+ +L+ G C   D + A  +   M
Sbjct: 368 TYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRM 427

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G++ + V+F  +++ LC++G++ +A R+L+ M+  G +P+   Y  ++D FC  G V
Sbjct: 428 VEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDV 487

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +L   M+  G    V +Y+ L+NG+CK  +++ A  L   ML+  + P+ + +N L
Sbjct: 488 KMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNIL 547

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             G  + H     FK+F+  +  G+ +D  +Y   ++
Sbjct: 548 LDGHCK-HGSSVDFKIFNGEK--GLVSDYASYTALVN 581


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/366 (32%), Positives = 183/366 (50%), Gaps = 17/366 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + +A L  +LR +G  P+    N +++ L        A+ LF+E+ + N     VC    
Sbjct: 214 LPSAPLLRRLRQYGISPSPEACNAVLSRLPLDE----AIELFQELPHKN-----VC---- 260

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++  LC  G V  A++LF +M      P+VVTY  LIHG C   +   A  L  E
Sbjct: 261 -SYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDE 316

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  GV+PN   +  ++  LC  G + +A R++E M+Q  V  +  +Y T++ GFC  G 
Sbjct: 317 MVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGD 376

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A   F  M+  G   +  +Y+ +ING C+  E+E A  L  EM ++ +  D V Y  
Sbjct: 377 LVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTV 436

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  ++  AF++ + M + GV  +   Y    DGLCK G +  A EL   +    
Sbjct: 437 LIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKG 496

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            EL+   YN LI+GLCK+G L+ A      +    L  DV TY  +I ALC  G +D+A 
Sbjct: 497 LELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAH 556

Query: 361 DLFLDM 366
            L  +M
Sbjct: 557 SLLQEM 562



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 176/345 (51%), Gaps = 6/345 (1%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y T+++G C  G  + A   F+EM       G+    + VTYTT+I+GLC+   +++A++
Sbjct: 364 YTTVLSGFCNKGDLVSARRWFDEMQRK----GLAT--DGVTYTTMINGLCRAVELEEAEK 417

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           L  +M    ++ + VTY  LI G+C      EA  +   M+ +GV PNVV++  + + LC
Sbjct: 418 LLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLC 477

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G +  A+ LL  M   G+  NA  YN+L++G C  G + +A      M++   K +V+
Sbjct: 478 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVY 537

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+  CK+ +++ A SL  EML KGIKP +V YN L  G     +VE   KL D M
Sbjct: 538 TYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWM 597

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
               +  +   Y + +   C    +    E+++ +R      +   YN LI G CK+  +
Sbjct: 598 LEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNM 657

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K A      + +        +Y+ +I  L    K  +AR+LF DM
Sbjct: 658 KEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDM 702



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 170/347 (48%), Gaps = 6/347 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A   F +++  G   +  TY T+INGLCR      A  L +EM      +      + 
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEM------WARRLDVDE 431

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +IDG CK G + +A ++   M    + PNVVTY +L  G C   D   A  L  E
Sbjct: 432 VTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHE 491

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++ N  ++N ++N LCK G +++A R +  M    ++P+ + Y TL+D  C +G 
Sbjct: 492 MSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGD 551

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++RA  L   M   G K  + +Y++L+NG+C +  +EG   L   ML K I P+   YN+
Sbjct: 552 LDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNS 611

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L       + ++   +++  M+   V  +   Y   I G CK   + EA+     +    
Sbjct: 612 LMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKG 671

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           + L   +Y+ LI  L K  +   A ELF  + +  L A+   Y+  I
Sbjct: 672 FRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/312 (32%), Positives = 154/312 (49%), Gaps = 6/312 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++     + +  TY  LI+G C+ G    A     +M N   + GV   PN V
Sbjct: 414 EAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAF----QMHNAMVQRGVT--PNVV 467

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT + DGLCK+G V  A EL  +M ++ +  N  TYNSLI+G C A    +A     +M
Sbjct: 468 TYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADM 527

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++P+V ++  +++ LCK+G +D A  LL+ M+  G++P    YN LM+GFC++GRV
Sbjct: 528 DTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRV 587

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              ++L   M       N  +Y+ L+  YC    ++    +Y  M S+ + P+   YN L
Sbjct: 588 EGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNIL 647

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++ A    DEM + G      +Y   I  L K    VEA ELF  +R    
Sbjct: 648 IKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGL 707

Query: 302 ELDIRAYNCLID 313
             +   Y+  ID
Sbjct: 708 TAESDVYDFYID 719



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/292 (30%), Positives = 147/292 (50%), Gaps = 7/292 (2%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A ELF ++  +N    V +YN L+   C A    +A+ LF EM      P+VV++ +
Sbjct: 244 LDEAIELFQELPHKN----VCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGI 296

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  C  G+++ A +LL+ M+  GV PNA VY +++   C  G ++ A  +   M    
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +   Y+ +++G+C   ++  A   + EM  KG+  D V Y T+  GL    ++E A 
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           KL  EM    +  D   Y   IDG CK G + EA ++   +       ++  Y  L DGL
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGL 476

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           CK G ++ A EL   +    L  +  TYN +I+ LC  G +++A     DM+
Sbjct: 477 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMD 528



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 143/291 (49%), Gaps = 11/291 (3%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           +  L  +++   I+P+    N+++         +EA  LF E+  +    NV S+N+++ 
Sbjct: 216 SAPLLRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHK----NVCSYNILLK 267

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LC  G++ +A +L + M      P+   Y  L+ G C  G +  A +L   M + G + 
Sbjct: 268 ALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEP 324

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N   Y+ ++   C    I  AL +  +M+ + +  D  +Y T+  G      +  A + F
Sbjct: 325 NATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWF 384

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DEMQR G+A D   Y T I+GLC+   + EA +L + +   + ++D   Y  LIDG CK 
Sbjct: 385 DEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKR 444

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G++  A+++  ++ +  +  +VVTY  +   LC  G +  A +L  +M  K
Sbjct: 445 GKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNK 495


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 187/357 (52%), Gaps = 8/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+ TYN +++GLC+ G       ++E M   N       +P+ +TY  +I GLC+ 
Sbjct: 259 GARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANN------LQPDVITYGILIHGLCRS 312

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A  ++ ++    +  +   YNSL+ GFC A    EA   +      G++ N+ ++
Sbjct: 313 GDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTY 371

Query: 134 NVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           N+++  L  +G +DEA  L +L+ + +   P+   + TL+ G C  G  N+A  +F    
Sbjct: 372 NIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEAR 431

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + +VFSYS +ING C    +  A+ +Y +M   G KP+  IYN L  G  ++++  
Sbjct: 432 VSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTS 491

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +++ +M  +G +     Y T IDGLCK     EA  + R +    +  DI  Y  LI
Sbjct: 492 DAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLI 551

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            GL    ++  A  +++ +    L  DV+ +NI+IH LC+ GK+D+A  +F DM+ K
Sbjct: 552 RGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608



 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 187/367 (50%), Gaps = 30/367 (8%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEE---------------MANGNGEFGVVCKP-- 58
           +P+V TY  LI+GLCR+G    A  ++ E               +  G  + G V +   
Sbjct: 296 QPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWK 355

Query: 59  -----------NTVTYTTIIDGLCKEGFVDKAKELF-LKMKDENINPNVVTYNSLIHGFC 106
                      N  TY  +I GL   G VD+A EL+ L  KD    P+ VT+ +LIHG C
Sbjct: 356 FWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC 415

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
                N+A  +F E    G Q +V S++ ++N LC  G++ +A ++ E M + G +PN+ 
Sbjct: 416 QNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSH 475

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +YN L+ GFC   R + A  ++  M   GC   V +Y+ LI+G CK ++ + A S+  EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           +  G  PD+  Y +L  GLF   +++ A  ++ ++   G+  D   +   I GLC  G +
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 287 VEAVELFRTLRILKY-ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
            EA+ +F  ++  K    ++  YN L+DGL ++G +  A  L+ S+    L  D+++YN 
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 346 MIHALCA 352
            I  LC+
Sbjct: 656 RIKGLCS 662



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 184/376 (48%), Gaps = 38/376 (10%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           + GC P + ++N L++   R      A   F  +++G   FG    PN  TY  ++  LC
Sbjct: 112 ILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG--AFGRRIAPNLQTYNIVLRSLC 169

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
             G +D+A  LF  ++   + P+ +TY++L+ G    +  + A  L  EM   GVQP+VV
Sbjct: 170 ARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVV 229

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            +N ++    K G+ ++  R+ + +++  G RPN   YN ++DG C  GR     E++  
Sbjct: 230 CYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M +   + +V +Y ILI+G C++ +++GA  +YSE++  G+  D  +YN+L  G  +  +
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349

Query: 251 VERAFKLFDEMQRHGVA-----------------------------------ADTWAYRT 275
           V+ A+K +D     G+                                     DT  + T
Sbjct: 350 VQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGT 409

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I GLC+NG+  +A  +F   R+   +LD+ +Y+ +I+GLC  GRL  A +++  + +  
Sbjct: 410 LIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDG 469

Query: 336 LIADVVTYNIMIHALC 351
              +   YN +I   C
Sbjct: 470 CKPNSHIYNALISGFC 485



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/341 (31%), Positives = 182/341 (53%), Gaps = 8/341 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N+ TYN +I GL  +G    A+ L++ +     E  V C P+TVT+ T+I GLC+ GF +
Sbjct: 367 NLRTYNIMIKGLFDSGMVDEAIELWDLL-----EKDVACIPDTVTFGTLIHGLCQNGFAN 421

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           KA  +F + +      +V +Y+S+I+G C      +A  ++ +M   G +PN   +N ++
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALI 481

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           +  C+  +  +A R+   M   G  P    YNTL+DG C   +   A  +   M   G  
Sbjct: 482 SGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFT 541

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            ++ +Y  LI G   +K+I+ ALS++ ++L KG+K DV+++N L  GL    +V+ A  +
Sbjct: 542 PDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHV 601

Query: 258 FDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           F +M ++     +   Y T +DGL + GYI +A  L+ ++     E DI +YN  I GLC
Sbjct: 602 FSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLC 661

Query: 317 KSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKM 356
              R+    +L    L RG+ I  V+T+NI++ A+   G +
Sbjct: 662 SCDRIHEGIQLLDEVLSRGI-IPTVITWNILVRAVIKYGPI 701



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 195/368 (52%), Gaps = 11/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF  LR     P+  TY+TL+ GL +      AL+L +EM       GV  +P+ V
Sbjct: 176 RAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRS----GV--QPDVV 229

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            Y  ++ G  K G  +K   ++ K+ KD    PN+ TYN ++ G C    + E   ++  
Sbjct: 230 CYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWER 289

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   +QP+V+++ ++++ LC++G +D A+R+   +I+ G+  +A +YN+L+ GFC  GR
Sbjct: 290 MVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGR 349

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--PDVVIY 238
           V  A + + S    G + N+ +Y+I+I G   +  ++ A+ L+ ++L K +   PD V +
Sbjct: 350 VQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTF 407

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  GL +     +AF +F+E +  G   D ++Y + I+GLC  G +V+AV+++  +  
Sbjct: 408 GTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDK 467

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +   YN LI G C+  R   A  ++  +        V+TYN +I  LC   K  +
Sbjct: 468 DGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQE 527

Query: 359 ARDLFLDM 366
           A  +  +M
Sbjct: 528 ASSVAREM 535



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 157/286 (54%), Gaps = 7/286 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F + RV G + +VF+Y+++INGLC  G  + A+ ++E+M + +G     CKPN+ 
Sbjct: 422 KAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKM-DKDG-----CKPNSH 475

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C+      A  ++ KM D   +P V+TYN+LI G C A  + EA  +  EM
Sbjct: 476 IYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREM 535

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  P++ ++  ++  L  + K+D+A  + + ++  G++ +  ++N L+ G C  G+V
Sbjct: 536 VENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKV 595

Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + A  +F  M E   C  N+ +Y+ L++G  +   I+ A +L++ +   G++PD++ YNT
Sbjct: 596 DEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNT 655

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
              GL    ++    +L DE+   G+      +   +  + K G I
Sbjct: 656 RIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPI 701



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 139/253 (54%), Gaps = 7/253 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  ++ K+   GC+PN   YN LI+G C+   T  A+ ++ +MA+ NG     C P  
Sbjct: 456 VDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD-NG-----CSPTV 509

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY T+IDGLCK     +A  +  +M +    P++ TY SLI G       ++A  ++ +
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQ 569

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI-GVRPNAFVYNTLMDGFCLTG 179
           ++ +G++ +V+  N++++ LC  GK+DEA  +   M +     PN   YNTLMDG   TG
Sbjct: 570 ILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETG 629

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +++A  L+ S+   G + ++ SY+  I G C    I   + L  E+LS+GI P V+ +N
Sbjct: 630 YIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWN 689

Query: 240 TLFIGLFEIHQVE 252
            L   + +   ++
Sbjct: 690 ILVRAVIKYGPIQ 702



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 115/240 (47%), Gaps = 5/240 (2%)

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ--IGVR--PNAFVYNTLMDGFCLTGR 180
           G  P + S N +++   +  +  +A      +     G R  PN   YN ++   C  G 
Sbjct: 114 GCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGD 173

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++RA  LF S+       +  +YS L+ G  K   ++ AL L  EM   G++PDVV YN 
Sbjct: 174 LDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNA 233

Query: 241 LFIGLFEIHQVERAFKLFDEMQRH-GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           L  G F+  + E+  +++D++ +  G   +   Y   +DGLCK G   E  E++  +   
Sbjct: 234 LLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVAN 293

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D+  Y  LI GLC+SG +  A  ++  + +  L+ D   YN ++   C  G++ +A
Sbjct: 294 NLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEA 353


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 186/399 (46%), Gaps = 47/399 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---KP 58
           +A  +F ++      PN  TYNT+I+G  + G      +L ++M         VC   KP
Sbjct: 214 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQM---------VCHGLKP 264

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N +TY  ++ GLC+ G + +   L  +M  + + P+  TY+ L  G     D      LF
Sbjct: 265 NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF 324

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            + +  GV     + ++++N LCK+GK+  A  +L+ ++  G+ P   +YNTL++G+C T
Sbjct: 325 GKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 384

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A   F  M+S   K +  +Y+ LING CK + I  A  L  EM   G+ P V  +
Sbjct: 385 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 444

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE------- 291
           NTL        Q+E+ F +  EMQ +G+  +  +Y + ++  CKNG I EAV        
Sbjct: 445 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 504

Query: 292 ----------------------------LFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
                                       L   ++       I  YN LI GLC   ++  
Sbjct: 505 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 564

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           A E+  SL    LI D V+YN +I A C  G +DKA DL
Sbjct: 565 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 603



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF K    G     +T + L+NGLC+ G   +A  + + + N     G+V  P  V Y 
Sbjct: 322 SLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA----GLV--PTRVIYN 375

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G C+ G ++ A   F +MK  +I P+ +TYN+LI+G C A     A+ L +EM D 
Sbjct: 376 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 435

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P V +FN +++   + G++++   +L  M + G++PN   Y ++++ FC  G++  A
Sbjct: 436 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 495

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +   M       N   Y+ +I+ Y ++   + A  L  +M S GI P +V YN L  G
Sbjct: 496 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 555

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    Q+  A ++ + +  H +  D  +Y T I   C  G I +A++L + +     +  
Sbjct: 556 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 615

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +R Y+ LI GL  +GRL     L++ + +  ++     +NIM+ A    G   KA DL  
Sbjct: 616 VRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 675

Query: 365 DMEAK 369
           +M  K
Sbjct: 676 EMLQK 680



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/368 (29%), Positives = 191/368 (51%), Gaps = 12/368 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLF-EEMANGN--GEFGVVCKP 58
           E +AL  ++      P+ FTY+ L +GL R G +   L+LF + + NG   G++      
Sbjct: 284 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDY------ 337

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
              T + +++GLCK+G V  A+E+   + +  + P  V YN+LI+G+C   +   A   F
Sbjct: 338 ---TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTF 394

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M  + ++P+ +++N ++N LCK  ++  A  LL  M   GV P    +NTL+D +  T
Sbjct: 395 GQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRT 454

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++ +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P+  +Y
Sbjct: 455 GQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVY 514

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N +     E    ++AF L ++M+ +G++     Y   I GLC    I EA E+  +L  
Sbjct: 515 NAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSN 574

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            +   D  +YN LI   C  G +  A +L + + +  + + V TY+ +I  L   G++ +
Sbjct: 575 HRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIE 634

Query: 359 ARDLFLDM 366
              L+  M
Sbjct: 635 MEYLYQKM 642



 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 150/312 (48%), Gaps = 5/312 (1%)

Query: 52  FGVVC----KPNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFC 106
           FG++     +P+T  +   +      G + +A  +  +M +D    PN  +YN +I G  
Sbjct: 148 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 207

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
            A    +A  +F EM ++ V PN +++N +++   K G ++    L + M+  G++PNA 
Sbjct: 208 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAI 267

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            YN L+ G C  GR+     L   M S     + F+YSIL +G  +N + +  LSL+ + 
Sbjct: 268 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKS 327

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L  G+       + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             A   F  ++    + D   YN LI+GLCK+ R+  A +L   +    +   V T+N +
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447

Query: 347 IHALCADGKMDK 358
           I A    G+++K
Sbjct: 448 IDAYGRTGQLEK 459



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 6/294 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F +++    +P+  TYN LINGLC+      A +L  EM + NG       P   T
Sbjct: 390 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD-NG-----VNPTVET 443

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+ID   + G ++K   +  +M++  + PNVV+Y S+++ FC      EA  +  +M 
Sbjct: 444 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 503

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V PN   +N I++   ++G  D+A  L+E M   G+ P+   YN L+ G C   +++
Sbjct: 504 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 563

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEE+  S+ +     +  SY+ LI+  C    I+ AL L   M   GIK  V  Y+ L 
Sbjct: 564 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 623

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            GL    ++     L+ +M ++ V      +   ++   K G  ++A +L + +
Sbjct: 624 SGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 677



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K++  G  P++ TYN LI GLC       A  +   ++N          P+ V
Sbjct: 529 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR------LIPDAV 582

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I   C  G +DKA +L  +M    I   V TY+ LI G   A    E + L+ +M
Sbjct: 583 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKM 642

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M   V P+    N+++    K G   +A  L + M+Q
Sbjct: 643 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 679



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 1/145 (0%)

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA-DTWAYRTFIDGLCKNG 284
           + S G +PD   +N           +  A  +   M R G    + ++Y   I G+ + G
Sbjct: 151 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 210

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              +AVE+F  +       +   YN +IDG  K G L+  + L   +    L  + +TYN
Sbjct: 211 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYN 270

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
           +++  LC  G+M +   L  +M ++
Sbjct: 271 VLLSGLCRAGRMGETSALLDEMASQ 295


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 196/390 (50%), Gaps = 29/390 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM---------------AN 47
           A  +F +L++ G  P + TY  LI+G C+ G   V   L  EM                +
Sbjct: 259 ATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIID 318

Query: 48  GNGEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
              ++G+V              C+P+  TY  +I+  C  G + +A+E   + K+  + P
Sbjct: 319 AKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLP 378

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N  +Y  L+H +C   D+  A  +  ++ + G +P++VS+   ++     G++D A  + 
Sbjct: 379 NKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVR 438

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           E M++ GV P+A +YN LM G C  GR   A+ L   M  +  + + + Y+ L++G+ +N
Sbjct: 439 EKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRN 498

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            E++ A  L+  ++SKGI P VV YN +  GL +  ++  A    ++M+    A D + +
Sbjct: 499 NELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTH 558

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            T IDG  K   +  A+++F  +   KY+ ++ AY  LI+G CK   +  A ++FR++  
Sbjct: 559 STVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQS 618

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLF 363
             L  +VVTY I+I      GK +KA   F
Sbjct: 619 FNLEPNVVTYTILIGGFSKTGKPEKAASFF 648



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 182/349 (52%), Gaps = 6/349 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   GCEP++ TYN LIN  C  G    A    EE      E  ++  PN  
Sbjct: 328 KAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEA----EEFLERAKERTLL--PNKF 381

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YT ++   CK+G    A ++  K+ +    P++V+Y + IHG     + + A  +  +M
Sbjct: 382 SYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKM 441

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++GV P+   +NV+M+ LCK G+   A  LL  M+ + ++P+A++Y TL+DGF     +
Sbjct: 442 MEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNEL 501

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A ELF  + S G    V  Y+++I G CK  ++  A+S  ++M      PD   ++T+
Sbjct: 502 DKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTV 561

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + H ++ A K+F +M +     +  AY + I+G CK   +  A ++FR ++    
Sbjct: 562 IDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNL 621

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           E ++  Y  LI G  K+G+ + A   F  +     + +  T++ +I+ L
Sbjct: 622 EPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGL 670



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 176/389 (45%), Gaps = 35/389 (8%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV---------- 55
            +M   ++ C P V   N+L+N L + G   VA  L+++M    G+ G+           
Sbjct: 151 FYMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVI 210

Query: 56  -------------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                                    C PN V Y  IIDG CK+G + +A  +F ++K + 
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKG 270

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             P + TY +LI GFC A  +     L  EM   G+  NV  FN I++   K G +D+A+
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAA 330

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            ++ +M ++G  P+   YN L++  C  GR+  AEE     +      N FSY+ L++ Y
Sbjct: 331 EMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAY 390

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK  +   A  +  ++   G KPD+V Y     G     +++ A  + ++M   GV  D 
Sbjct: 391 CKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDA 450

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   + GLCK G    A  L   +  L  + D   Y  L+DG  ++  L  A ELF  
Sbjct: 451 QIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEV 510

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +    +   VV YN+MI  LC  GKM  A
Sbjct: 511 VMSKGIDPGVVGYNVMIKGLCKCGKMTDA 539



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 192/412 (46%), Gaps = 55/412 (13%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+ +  K+   G +P++ +Y   I+G    G   VAL + E+M     E GV   P+   
Sbjct: 399 ASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMM----EKGVF--PDAQI 452

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++ GLCK+G    AK L  +M D N+ P+   Y +L+ GF   N+ ++A  LF  +M
Sbjct: 453 YNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVM 512

Query: 123 DQGVQPNVVSFNVIMNELCKNGKM-----------------------------------D 147
            +G+ P VV +NV++  LCK GKM                                   D
Sbjct: 513 SKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLD 572

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
            A ++   M++   +PN   Y +L++GFC    ++RAE++F +M+S   + NV +Y+ILI
Sbjct: 573 SALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILI 632

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI----------HQVERAFKL 257
            G+ K  + E A S +  ML     P+   ++ L  GL  I           + +R+  L
Sbjct: 633 GGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLIL 692

Query: 258 --FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-YELDIRAYNCLIDG 314
             F  M   G +     Y + I  LCK+G +V+  +L +T  + K + +D   ++ L+ G
Sbjct: 693 DFFATMISEGWSQVIATYNSIIVCLCKHG-MVDTAQLLQTKMLRKGFLMDSVCFSALLHG 751

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LC++G+ K    +       +       Y++ +     DGK  +A  + L++
Sbjct: 752 LCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILLNL 803



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 148/315 (46%), Gaps = 7/315 (2%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N V Y++++  + K     + + +   MK+ N  P +   NS+I  +      ++A  +F
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151

Query: 119 IEMMD-QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG------VRPNAFVYNTL 171
             + +     P VV+ N ++N L KNGK+D A  L + M++ G      +  + +    +
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G C  G+V    +L       GC  NV  Y+++I+GYCK  +++ A  ++ E+  KG 
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P +  Y  L  G  +  + +   +L +EM   G+  +   + + ID   K G + +A E
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAE 331

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           + R +  +  E DI  YN LI+  C  GR+K A E         L+ +  +Y  ++HA C
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYC 391

Query: 352 ADGKMDKARDLFLDM 366
             G    A D+   +
Sbjct: 392 KQGDYVMASDMLFKI 406



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 78/169 (46%), Gaps = 18/169 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI------------VALNLFEEMANGN 49
           +AA+ F  + +  C PN  T++ LINGL    +T             + L+ F  M +  
Sbjct: 643 KAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMIS-E 701

Query: 50  GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
           G   V+      TY +II  LCK G VD A+ L  KM  +    + V +++L+HG C   
Sbjct: 702 GWSQVIA-----TYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTG 756

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
              E + +    + +        +++ +++   +GK  EAS +L  +I+
Sbjct: 757 KSKEWRNIISGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILLNLIE 805


>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g09680-like [Glycine max]
          Length = 509

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 184/350 (52%), Gaps = 6/350 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A ++++   G  PN F +N L++G C+ G    A  +F+E+           +P  V++ 
Sbjct: 128 AFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRG------LRPTVVSFN 181

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I G CK G V++   L   M+ E + P+V T+++LI+G C     +E   LF EM  +
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN V+F V+++  CK GK+D A +  ++M+  GVRP+   YN L++G C  G +  A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M + G + +  +++ LI+G CK  ++E AL +   M+ +GI+ D V +  L  G
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    +V  A ++  +M   G   D   Y   +D  CK G +    +L + ++   +   
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           +  YN L++GLCK G++K A  L  ++    +  + +TYNI++      G
Sbjct: 422 VVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEGHSKHG 471



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/306 (31%), Positives = 165/306 (53%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN   +  ++ G CK G V  A+ +F ++    + P VV++N+LI G C A    E   L
Sbjct: 140 PNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL 199

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M  + V P+V +F+ ++N LCK G++DE S L + M   G+ PN   +  L+DG C 
Sbjct: 200 KGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCK 259

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+V+ A + F  M + G + ++ +Y+ LING CK  +++ A  L +EM + G++PD + 
Sbjct: 260 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRIT 319

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           + TL  G  +   +E A ++   M   G+  D  A+   I GLC++G + +A  + R + 
Sbjct: 320 FTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDML 379

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              ++ D   Y  ++D  CK G + + ++L + +     +  VVTYN +++ LC  G++ 
Sbjct: 380 SAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVK 439

Query: 358 KARDLF 363
            A+ L 
Sbjct: 440 NAKMLL 445



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 160/293 (54%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++++   +L++ D    PN   +N L+HGFC       A+ +F E+  +G++P VVSFN 
Sbjct: 123 LERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFNT 182

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  CK G ++E  RL  +M    V P+ F ++ L++G C  GR++    LF  M   G
Sbjct: 183 LISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGKG 242

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              N  ++++LI+G CK  +++ AL  +  ML++G++PD+V YN L  GL ++  ++ A 
Sbjct: 243 LVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 302

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L +EM   G+  D   + T IDG CK G +  A+E+ R +     ELD  A+  LI GL
Sbjct: 303 RLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGL 362

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           C+ GR+  A  + R +       D  TY +++   C  G +     L  +M++
Sbjct: 363 CRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQS 415



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 166/304 (54%), Gaps = 9/304 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+VFT++ LINGLC+ G       LF+EM       G+V  PN VT+T +IDG CK G V
Sbjct: 210 PDVFTFSALINGLCKEGRLDEGSLLFDEMCGK----GLV--PNGVTFTVLIDGQCKGGKV 263

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A + F  M  + + P++VTYN+LI+G C   D  EA+ L  EM   G++P+ ++F  +
Sbjct: 264 DLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTL 323

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++  CK G M+ A  +   M++ G+  +   +  L+ G C  GRV+ AE +   M S G 
Sbjct: 324 IDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGF 383

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K +  +Y+++++ +CK   +     L  EM S G  P VV YN L  GL +  QV+ A  
Sbjct: 384 KPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKM 443

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D M   GVA +   Y   ++G  K+G  V+ V++F + + L    D  +Y  L++   
Sbjct: 444 LLDAMLNVGVAPNDITYNILLEGHSKHGSSVD-VDIFNSEKGLVK--DYASYTALVNESS 500

Query: 317 KSGR 320
           K+ +
Sbjct: 501 KTSK 504



 Score =  174 bits (441), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/347 (31%), Positives = 177/347 (51%), Gaps = 9/347 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   G  P V ++NTLI+G C+ G       L      G  E   VC P+  
Sbjct: 160 SARLVFDEIPKRGLRPTVVSFNTLISGCCKAGAVEEGFRL-----KGVMESERVC-PDVF 213

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +I+GLCKEG +D+   LF +M  + + PN VT+  LI G C     + A   F  M
Sbjct: 214 TFSALINGLCKEGRLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMM 273

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QGV+P++V++N ++N LCK G + EA RL+  M   G+RP+   + TL+DG C  G +
Sbjct: 274 LAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDM 333

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+   M   G + +  ++++LI+G C++  +  A  +  +MLS G KPD   Y  +
Sbjct: 334 ESALEIKRRMVEEGIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMV 393

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +   V   FKL  EMQ  G       Y   ++GLCK G +  A  L   +  +  
Sbjct: 394 VDCFCKKGNVXMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGV 453

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
             +   YN L++G  K G   +  ++F S  +G L+ D  +Y  +++
Sbjct: 454 APNDITYNILLEGHSKHGS-SVDVDIFNS-EKG-LVKDYASYTALVN 497



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 77/155 (49%)

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           E+E + + Y E+L  G  P+   +N L  G  ++  V  A  +FDE+ + G+     ++ 
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I G CK G + E   L   +   +   D+  ++ LI+GLCK GRL     LF  +   
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L+ + VT+ ++I   C  GK+D A   F  M A+
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQ 276


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/365 (31%), Positives = 189/365 (51%), Gaps = 11/365 (3%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            ++  ++  G EPNVFTYN L+  LC+      A  L  EM++        C P+ V+YT
Sbjct: 167 PIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKG------CDPDEVSYT 220

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I  LCK G V +A+EL +     +  P+V  YN+LI+G C    + EA  L  EMM++
Sbjct: 221 TLISSLCKLGKVKEARELAM-----SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNK 275

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PNV+S+  I+N L   G ++ +  +L  M   G  PN   + +L+ GF L G  + A
Sbjct: 276 GIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEA 335

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            + +  M   G   NV +Y+ L++G C  + +  A+S++++M   G  P+V  Y+ L  G
Sbjct: 336 LDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDG 395

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   ++ A ++++ M  HG   +  AY   +D LC+N    +A  L   +++     +
Sbjct: 396 YAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPN 455

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
              +N  I GLC SGR+  A ++F  +       +  TYN ++ +L  D +  +A  L  
Sbjct: 456 TVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVK 515

Query: 365 DMEAK 369
           DME +
Sbjct: 516 DMEHR 520



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 177/358 (49%), Gaps = 6/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +PNV +Y T+IN L   G+  ++L +  +M      F   C PN  
Sbjct: 264 EAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKM------FARGCSPNLH 317

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T++I G   +G   +A + + +M  E + PNVV YN+L+HG C      +A  +F +M
Sbjct: 318 TFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQM 377

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  PNV +++ +++   K G +D AS +   MI  G  PN   Y  ++D  C     
Sbjct: 378 EINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMF 437

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A  L  +M+   C  N  +++  I G C +  ++ A+ ++ +M + G  P+   YN L
Sbjct: 438 NQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNEL 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +   AF L  +M+  G+  +   Y T I G C  G + EA+EL   + +   
Sbjct: 498 LDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGT 557

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + D    N +ID  CK G++ IA +L   L  G    D++ Y  +I  +C    +++A
Sbjct: 558 KPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEA 615



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/390 (30%), Positives = 186/390 (47%), Gaps = 24/390 (6%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI----VALNLFEEMANGNGEFGVVCK- 57
           A  L +++   GC+P+  +Y TLI+ LC+ G       +A++    +   N     VCK 
Sbjct: 200 AHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKE 259

Query: 58  -------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY 98
                              PN ++YTTII+ L   G V+ +  +  KM     +PN+ T+
Sbjct: 260 YTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTF 319

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
            SLI GF      +EA   +  M+ +GV PNVV++N +M+ LC    + +A  +   M  
Sbjct: 320 TSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEI 379

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN   Y+ L+DG+   G ++ A E++  M + GC  NV +Y+ +++  C+N     
Sbjct: 380 NGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQ 439

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L   M  +   P+ V +NT   GL    +V+ A K+FD+M   G   +T  Y   +D
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLD 499

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            L K+    EA  L + +     EL++  YN +I G C +G L  A EL   +       
Sbjct: 500 SLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           D +T NI+I A C  GK++ A  L   + A
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSA 589



 Score =  164 bits (416), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/362 (29%), Positives = 171/362 (47%), Gaps = 13/362 (3%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           MKL    C  ++F   ++I    R G +  AL  F  M     +F V  KP    Y  I+
Sbjct: 102 MKLEGISCSEDLFI--SVIGSYRRAGSSEQALKTFYRMQ----DFRV--KPTVKIYNHIL 153

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           D L  E        ++  MK + + PNV TYN L+   C  N  + A  L +EM  +G  
Sbjct: 154 DALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCD 213

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+ VS+  +++ LCK GK+ EA  L      +   P+  VYN L++G C       A +L
Sbjct: 214 PDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNALINGVCKEYTFEEAFQL 268

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M + G   NV SY+ +IN       +E +L++ ++M ++G  P++  + +L  G F 
Sbjct: 269 LDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFL 328

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
                 A   +D M R GV  +  AY   + GLC    + +AV +F  + I     ++R 
Sbjct: 329 KGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRT 388

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y+ LIDG  K+G L  A E++  +       +VV Y  M+  LC +   ++A  L  +M+
Sbjct: 389 YSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQ 448

Query: 368 AK 369
            +
Sbjct: 449 VE 450



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 8/303 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  PNV  YN L++GLC       A+++F +M  NG       C PN  TY+ +IDG  K
Sbjct: 346 GVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEING-------CCPNVRTYSALIDGYAK 398

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D A E++  M     +PNVV Y  ++   C  + +N+A CL   M  +   PN V+
Sbjct: 399 AGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVT 458

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN  +  LC +G++D A ++ + M   G  PN   YN L+D      R   A  L   ME
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G + N+ +Y+ +I GYC    +  AL L  +M+ +G KPD +  N +     +  +V 
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +L D +       D  AY + I G+C +  + EA+   R +       ++  +N L+
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638

Query: 313 DGL 315
             L
Sbjct: 639 RHL 641



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/299 (28%), Positives = 146/299 (48%), Gaps = 6/299 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F ++ + GC PNV TY+ LI+G  + G    A  ++  M          C PN V
Sbjct: 369 DAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHG------CHPNVV 422

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT ++D LC+    ++A  L   M+ EN  PN VT+N+ I G C +   + A  +F +M
Sbjct: 423 AYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  PN  ++N +++ L K+ +  EA  L++ M   G+  N   YNT++ G+C  G +
Sbjct: 483 GNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M   G K +  + +I+I+ YCK  ++  A+ L   + +    PD++ Y +L
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
             G+     VE A      M   G++ +   +   +  L  N     AV+      I++
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSIMQ 661



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 154/331 (46%), Gaps = 10/331 (3%)

Query: 37  VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
           +AL  F+ +AN         K   +TY  +I+ L  E  +D  + L  +MK E I+ +  
Sbjct: 58  LALEYFKSIANSKS-----FKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSED 112

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
            + S+I  +  A    +A   F  M D  V+P V  +N I++ L    +    + +   M
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
            + G+ PN F YN L+   C   RV+ A +L V M S GC  +  SY+ LI+  CK  ++
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A       L+    P V +YN L  G+ + +  E AF+L DEM   G+  +  +Y T 
Sbjct: 233 KEA-----RELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTI 287

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I+ L   G +  ++ +   +       ++  +  LI G    G    A + +  + R  +
Sbjct: 288 INALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGV 347

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + +VV YN ++H LC+   +  A  +F  ME
Sbjct: 348 VPNVVAYNALMHGLCSKRSLGDAVSVFNQME 378



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 5/239 (2%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           +++ +++ +L    +MD    LL+ M   G+  +  ++ +++  +   G   +A + F  
Sbjct: 77  LTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYR 136

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M+    K  V  Y+ +++        +    +YS M   G++P+V  YN L   L + ++
Sbjct: 137 MQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNR 196

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V+ A KL  EM   G   D  +Y T I  LCK G + EA EL      + +   +  YN 
Sbjct: 197 VDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL-----AMSFTPSVPVYNA 251

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LI+G+CK    + A++L   +    +  +V++Y  +I+AL   G ++ +  +   M A+
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFAR 310



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 70/142 (49%)

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           SK  K   + Y  +   L    +++    L  +M+  G++     + + I    + G   
Sbjct: 69  SKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSE 128

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A++ F  ++  + +  ++ YN ++D L    R ++   ++ ++ +  +  +V TYNI++
Sbjct: 129 QALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILL 188

Query: 348 HALCADGKMDKARDLFLDMEAK 369
            ALC + ++D A  L ++M +K
Sbjct: 189 KALCKNNRVDGAHKLLVEMSSK 210


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/352 (32%), Positives = 181/352 (51%), Gaps = 6/352 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PN  TYNT+I G C  G     + +  EM    G       P+  TY T+I G CK G 
Sbjct: 144 SPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGG-----IAPDKYTYATVISGWCKVGK 198

Query: 76  VDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           V+ A ++F +M  E  + PN V YN+LI G+C   +   A     EM+D+GV   V ++N
Sbjct: 199 VEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYN 258

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           + ++ L   G+  EA  L+E M + G+ P+AF YN L++G+C  G+  +A ++F  M   
Sbjct: 259 LFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGK 318

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G +  V +Y+ LI+       ++    L+++ + +GI+PD+ +YN L         ++RA
Sbjct: 319 GIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRA 378

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           F++  EM++  +  D   Y T + GLC  G + EA  L   +     + D+ +YN LI G
Sbjct: 379 FEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISG 438

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               G +K A ++   +        ++TYN MI  LC +G+   A DL  +M
Sbjct: 439 YSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEM 490



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 154/313 (49%), Gaps = 6/313 (1%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +T T+  ++  LC  G   +A EL  +M     +PN VTYN++I GFC          + 
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIM 170

Query: 119 IEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFC 176
            EM ++G + P+  ++  +++  CK GK+++A+++ + M+  G V PNA +YN L+ G+C
Sbjct: 171 REMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYC 230

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G +  A      M   G    V +Y++ ++          A +L  EM  KG+ PD  
Sbjct: 231 DQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAF 290

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN L  G  +  + ++A K+F+ M   G+ A    Y + I  L   G + E   LF   
Sbjct: 291 TYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDA 350

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D+  YN LI+  C  G +  A+E+   + +  +  D VTYN ++  LC  G++
Sbjct: 351 VRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRL 410

Query: 357 DKARDLFLDMEAK 369
           D+AR L  +M  +
Sbjct: 411 DEARGLIEEMTKR 423



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 127/244 (52%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  ++   G  P+ FTYN LING C+ G    A+ +FE M  G G      +   V
Sbjct: 272 EAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMV-GKG-----IRATVV 325

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I  L  +G V +   LF       I P++  YN+LI+  C   D + A  +  EM
Sbjct: 326 TYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEM 385

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ V++N +M  LC  G++DEA  L+E M + G++P+   YNTL+ G+ + G +
Sbjct: 386 EKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDI 445

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M   G    + +Y+ +I G C N +   A  L  EM+  GI PD   Y +L
Sbjct: 446 KDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISL 505

Query: 242 FIGL 245
             GL
Sbjct: 506 IEGL 509



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 133/266 (50%), Gaps = 6/266 (2%)

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           +H    +     A  LF ++    +  +  +FN+++  LC  GK     R LEL+ Q+  
Sbjct: 88  LHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGK---PVRALELLRQM-P 143

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGAL 220
            PNA  YNT++ GFC  GRV    E+   M E  G   + ++Y+ +I+G+CK  ++E A 
Sbjct: 144 SPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDAT 203

Query: 221 SLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
            ++ EML++G ++P+ V+YN L  G  +   +E A +   EM   GV+     Y  F+  
Sbjct: 204 KVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHT 263

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           L   G   EA  L   +       D   YN LI+G CK G+ K A ++F  +    + A 
Sbjct: 264 LFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRAT 323

Query: 340 VVTYNIMIHALCADGKMDKARDLFLD 365
           VVTY  +IHAL   G + +   LF D
Sbjct: 324 VVTYTSLIHALSMKGMVQETDRLFND 349


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 191/369 (51%), Gaps = 12/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +    C  + +TY+TL++GLC  G    A++L +EM    G F     PN V
Sbjct: 18  QAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM-QVEGTF-----PNPV 71

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I  LCK+G + +A +L   M  +   PN VTYNSL+HG C     ++A  L   M
Sbjct: 72  AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 131

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN ++F  +++   K+G+  +  R+L  + + G R N F Y++L+ G    G+ 
Sbjct: 132 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 191

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +L+  M   GCK N   YS LI+G C+  + + A     EM +KG  P+   Y++L
Sbjct: 192 EHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSL 251

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G FE   + +A  ++ EM  +        Y   I+GLCKNG + EA+ +++ +     
Sbjct: 252 MWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGI 311

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL----PRGVLIADVVTYNIMIHALCADGKMD 357
           +LD+ AY+ +I G C +  ++   +LF  +    P+  L  DVVTYNI+++A C    + 
Sbjct: 312 KLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK--LQPDVVTYNILLNAFCTKNSVS 369

Query: 358 KARDLFLDM 366
           +A D+   M
Sbjct: 370 RAIDILNTM 378



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 173/395 (43%), Gaps = 57/395 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A+ L   + + GC PN  TYN+L++GLC  G    A++L   M          C PN +
Sbjct: 88  RASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK------CVPNDI 141

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T++DG  K G       + + ++++    N  +Y+SLI G            L+ EM
Sbjct: 142 TFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEM 201

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +PN + ++ +++ LC+ GK DEA   L  M   G  PN+F Y++LM G+   G +
Sbjct: 202 VEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDI 261

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--------- 232
           ++A  ++  M    C H+   YSILING CKN +++ AL ++ +MLS+GIK         
Sbjct: 262 HKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSM 321

Query: 233 ----------------------------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
                                       PDVV YN L       + V RA  + + M   
Sbjct: 322 IHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQ 381

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D      F+  L  N      ++  +  R    EL +R        L K  R   A
Sbjct: 382 GCDPDFITCDIFLKTLRDN------MDPPQDGREFLDELVVR--------LIKRQRTVGA 427

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +   + +  L+    T+ + +  LC   K+ K 
Sbjct: 428 SNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKT 462



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 137/238 (57%), Gaps = 8/238 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++   + + L   G   N F+Y++LI+GL + G     + L++EM          CKPNT
Sbjct: 157 LDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG------CKPNT 210

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y+ +IDGLC+EG  D+AKE  ++MK++   PN  TY+SL+ G+  A D ++A  ++ E
Sbjct: 211 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 270

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D     + V +++++N LCKNGK+ EA  + + M+  G++ +   Y++++ GFC    
Sbjct: 271 MTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 330

Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           V +  +LF  M   +   + +V +Y+IL+N +C    +  A+ + + ML +G  PD +
Sbjct: 331 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFI 388



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/230 (27%), Positives = 117/230 (50%)

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LC+ G +D+A  +   M       + + Y+TLM G C  GR++ A  L   M+  G   N
Sbjct: 10  LCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPN 69

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
             ++++LI+  CK  ++  A  L   M  KG  P+ V YN+L  GL    ++++A  L +
Sbjct: 70  PVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLN 129

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M  +    +   + T +DG  K+G  ++ V +  +L    Y  +  +Y+ LI GL K G
Sbjct: 130 RMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEG 189

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + +   +L++ +       + + Y+ +I  LC +GK D+A++  ++M+ K
Sbjct: 190 KGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNK 239


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 186/377 (49%), Gaps = 29/377 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGH--------------------TIVALNL 41
           EAA L  ++ + GC PN  TY  L+ GLC                        T++   L
Sbjct: 260 EAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIGRCL 319

Query: 42  FE-------EMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPN 94
            +       E+    G  G  C P+  TY+ +I GLCK G +  A +L  +M+D+   P+
Sbjct: 320 LDGKLKEAAELYETMGSKG--CPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPS 377

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           +VTY  L+H FC    W+  + +   M D+G+  N+  +N ++  +CK+ +MD+A R ++
Sbjct: 378 IVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQ 437

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M   G +P+   YNT++   C   ++  AE LF ++   G   N  +Y+ LI+   +N 
Sbjct: 438 EMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNG 497

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
             + A+SL ++M+  G   D+V YN L   L     V+R+  L  EM   G+  +  +Y 
Sbjct: 498 SWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYN 557

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
             I  LCK   + +A+EL + +   +   DI  YN LI+GLCK G +  A  L   L   
Sbjct: 558 LLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNE 617

Query: 335 VLIADVVTYNIMIHALC 351
            + AD++TYNI+I   C
Sbjct: 618 DVHADIITYNILISWHC 634



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/347 (32%), Positives = 169/347 (48%), Gaps = 6/347 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA L+  +   GC P+  TY+ LI+GLC+ G    A+ L  EM +          P+ V
Sbjct: 326 EAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKG------FAPSIV 379

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++   C+ G  D  + +   M D+ ++ N+  YN +I   C     ++A     EM
Sbjct: 380 TYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEM 439

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG +P++ ++N I+  LC N +M+EA  L E ++  GV  NA  YNTL+      G  
Sbjct: 440 KSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSW 499

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   M   GC  ++ SY+ LI   C++  ++ ++ L SEM  KGIKP+ V YN L
Sbjct: 500 QDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLL 559

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  +V  A +L  EM    +  D   Y T I+GLCK G++  A+ L   L     
Sbjct: 560 ISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDV 619

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
             DI  YN LI   CK+  L  A  L        +  +  T+ IM+ 
Sbjct: 620 HADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQ 666



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/400 (29%), Positives = 185/400 (46%), Gaps = 45/400 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   GC P+   Y T+I+ LC  G    A  L +EM      F + C  +  
Sbjct: 190 EALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEM------FLMGCSADVN 243

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  I+ GLC  G + +A  L  +M      PN +TY  L+ G C A+   EA+     M
Sbjct: 244 TFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEAR----TM 299

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +  + NVV FN ++     +GK+ EA+ L E M   G  P+A  Y+ L+ G C  GR+
Sbjct: 300 LGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRL 359

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKN---------------------------- 213
             A +L   ME  G   ++ +Y+IL++ +C+N                            
Sbjct: 360 GSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGM 419

Query: 214 -------KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                  + ++ A+    EM S+G KPD+  YNT+   L   +Q+E A  LF+ +   GV
Sbjct: 420 ICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGV 479

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
            A+   Y T I  L +NG   +A+ L   + +    LDI +YN LI  LC+ G +  +  
Sbjct: 480 VANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIM 539

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L   +    +  + V+YN++I  LC   ++  A +L  +M
Sbjct: 540 LLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEM 579



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 174/385 (45%), Gaps = 36/385 (9%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F   P+  +YNT++    R       L+L+  M + +        P T T++     LC+
Sbjct: 130 FAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDR-----VPPTTFTFSIAARALCR 184

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G  D+A  +   M      P+ V Y ++IH  C     NEA  L  EM   G   +V +
Sbjct: 185 LGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNT 244

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT-------------- 178
           FN I++ LC  G++ EA+RL++ M+  G  PNA  Y  L+ G CL               
Sbjct: 245 FNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVP 304

Query: 179 -----------------GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
                            G++  A EL+ +M S GC  +  +YSILI+G CK   +  A+ 
Sbjct: 305 ELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMK 364

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L  EM  KG  P +V Y  L          +    + + M   G++ +   Y   I  +C
Sbjct: 365 LLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVC 424

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K+  + +A+   + ++   Y+ DI  YN +I  LC + +++ A  LF +L    ++A+ +
Sbjct: 425 KDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAI 484

Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
           TYN +IHAL  +G    A  L  DM
Sbjct: 485 TYNTLIHALLRNGSWQDAISLANDM 509



 Score =  134 bits (337), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 133/280 (47%), Gaps = 5/280 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEA 149
           ++P+  +YN+++  F  A+   +   L+  M+ +  V P   +F++    LC+ G+ DEA
Sbjct: 132 VSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEA 191

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             +L  M + G  P+  +Y T++   C  G VN A  L   M  MGC  +V +++ +++G
Sbjct: 192 LTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHG 251

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            C    +  A  L   M+ +G  P+ + Y  L  GL    QVE A  +   +    V   
Sbjct: 252 LCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVL- 310

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              + T I     +G + EA EL+ T+       D   Y+ LI GLCK GRL  A +L R
Sbjct: 311 ---FNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLR 367

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +        +VTY I++H+ C +G  D  R +   M  K
Sbjct: 368 EMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDK 407



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 6/213 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  L   G   N  TYNTLI+ L R G    A++L  +M          C  + V
Sbjct: 466 EAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHG------CSLDIV 519

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I  LC++G VD++  L  +M ++ I PN V+YN LI   C      +A  L  EM
Sbjct: 520 SYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEM 579

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++Q + P++V++N ++N LCK G M  A  LLE +    V  +   YN L+   C    +
Sbjct: 580 LNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLL 639

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           + A  L     + G   N  ++ I++  + +  
Sbjct: 640 HDASMLLNRAVTSGITPNERTWGIMVQNFVRKS 672


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/372 (31%), Positives = 197/372 (52%), Gaps = 14/372 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L   ++    +P+V TYNTLI+G    G ++ A  L E+M N     GV  KPN V
Sbjct: 328 EGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMEND----GV--KPNQV 381

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKD----ENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           T+   +  LCKE   +K +E+  K+K+       +P++VTY++LI  +    D + A  +
Sbjct: 382 THNISLKWLCKE---EKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +G++ N ++ N I++ LCK  K+DEA  LL+   + G   +   Y TL+ G+  
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFR 498

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             +V +A E++  M+ +     V +++ LI G C + + E A+  + E+   G+ PD   
Sbjct: 499 EEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCT 558

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N++ +G  +  +VE+AF+ ++E  +H    D +     ++GLCK G   +A+  F TL 
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL- 617

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           I + E+D   YN +I   CK  +LK A++L   +    L  D  TYN +I +L  DGK+ 
Sbjct: 618 ITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLS 677

Query: 358 KARDLFLDMEAK 369
           +A +L      K
Sbjct: 678 EADELLKKFSGK 689



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 193/398 (48%), Gaps = 43/398 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G   +V T+N L+NG C  G    AL + E M +   EF V   P+ VT
Sbjct: 188 AREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVS---EFNV--NPDNVT 242

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TI+  + K+G +   K+L L MK   + PN VTYN+L++G+C      EA    +E+M
Sbjct: 243 YNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEA-FQIVELM 301

Query: 123 DQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            Q  + P++ ++N+++N +C  G + E   L+++M  + ++P+   YNTL+DG    G  
Sbjct: 302 KQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 182 NRAEELFVSMESMGCKHN------------------------------------VFSYSI 205
             A++L   ME+ G K N                                    + +Y  
Sbjct: 362 LEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHT 421

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI  Y K  ++ GAL +  EM  KGIK + +  NT+   L +  +V+ A  L D   + G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRG 481

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D   Y T I G  +   + +A E++  ++ +K    +  +N LI GLC  G+ ++A 
Sbjct: 482 YIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAM 541

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           E F  L    L+ D  T+N +I   C +G+++KA + +
Sbjct: 542 EKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFY 579



 Score =  149 bits (377), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 174/352 (49%), Gaps = 11/352 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK--EG 74
           P+   ++  ++     G   VAL +F++M        +  KPN +T  T++ GL +    
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKM------IRLKLKPNLLTCNTLLIGLVRYPSS 182

Query: 75  F-VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVS 132
           F +  A+E+F  M    ++ +V T+N L++G+C      +A  +   M+ +  V P+ V+
Sbjct: 183 FSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVT 242

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N I+  + K G++ +   LL  M + G+ PN   YN L+ G+C  G +  A ++   M+
Sbjct: 243 YNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMK 302

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 ++ +Y+ILING C    I   L L   M S  ++PDVV YNTL  G FE+    
Sbjct: 303 QTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSL 362

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCL 311
            A KL ++M+  GV  +   +   +  LCK     E     + L  +  +  DI  Y+ L
Sbjct: 363 EAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTL 422

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           I    K G L  A E+ R + +  +  + +T N ++ ALC + K+D+A +L 
Sbjct: 423 IKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLL 474



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 166/379 (43%), Gaps = 29/379 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  ++   G +PN  T+N  +  LC+           +E+   +G       P+ 
Sbjct: 362 LEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHG-----FSPDI 416

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I    K G +  A E+  +M  + I  N +T N+++   C     +EA  L   
Sbjct: 417 VTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDS 476

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              +G   + V++  ++    +  K+++A  + + M +I + P    +N+L+ G C  G+
Sbjct: 477 AHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGK 536

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A E F  +   G   +  +++ +I GYCK   +E A   Y+E +    KPD    N 
Sbjct: 537 TELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNI 596

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +    E+A   F+ +       DT  Y T I   CK+  + EA +L   +   +
Sbjct: 597 LLNGLCKEGMTEKALNFFNTLITER-EVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKR 655

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWEL-------FRSLPRGV----------------LI 337
            E D   YN +I  L + G+L  A EL       F S+ R +                L 
Sbjct: 656 LEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLETEKNPATSESKEELK 715

Query: 338 ADVVTYNIMIHALCADGKM 356
            + + Y+ +I+ LC+ G++
Sbjct: 716 TEAIAYSDVINELCSRGRL 734



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 12/277 (4%)

Query: 100 SLIHGFCYANDWNEAKC--LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           SL+  +   +D + + C  L    +     P+   F++ ++     GK   A ++ + MI
Sbjct: 99  SLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMI 158

Query: 158 QIGVRPNAFVYNTLMDG---FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           ++ ++PN    NTL+ G   +  +  +  A E+F  M  +G   +V ++++L+NGYC   
Sbjct: 159 RLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEG 218

Query: 215 EIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           ++E AL +   M+S+  + PD V YNT+   + +  ++     L  +M+R+G+  +   Y
Sbjct: 219 KLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTY 278

Query: 274 RTFIDGLCKNGYIVEA---VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
              + G CK G + EA   VEL +   IL    D+  YN LI+G+C +G ++   EL   
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNILP---DLCTYNILINGVCNAGSIREGLELMDV 335

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +    L  DVVTYN +I      G   +A+ L   ME
Sbjct: 336 MKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQME 372



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 76/158 (48%), Gaps = 30/158 (18%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+ +T N L+NGLC+ G T  ALN F  +           + +TVTY T+I   CK+  
Sbjct: 588 KPDNYTCNILLNGLCKEGMTEKALNFFNTLITER-------EVDTVTYNTMISAFCKDKK 640

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA---------------KCLFIE 120
           + +A +L  +M+++ + P+  TYNS+I         +EA               + L +E
Sbjct: 641 LKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKFSGKFGSMKRNLHLE 700

Query: 121 M--------MDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                      + ++   ++++ ++NELC  G++ E S
Sbjct: 701 TEKNPATSESKEELKTEAIAYSDVINELCSRGRLKEHS 738


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/351 (31%), Positives = 194/351 (55%), Gaps = 8/351 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V     L++G C++G    A  +F+ M       GV   PN VTYT +I G    G  +
Sbjct: 37  DVAACTALVHGCCQSGDVAEARRVFDVMPR----LGVT--PNEVTYTALIHGYFVRGQRE 90

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
               L  +M+   + PN+ TYN L+  +C   ++  A+ LF EM  +GV  NVVS+N+++
Sbjct: 91  MGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILI 150

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC++GK+ +A++L E M + G+ P+   +N L+DG+   G+++ A   F  M++ G +
Sbjct: 151 AGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQ 210

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF-EIHQVERAFK 256
            +V +Y+ LI G+C+ ++I  A+  +S+M  + + P  V Y T+ IG F + ++++RAF+
Sbjct: 211 PSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTY-TILIGAFAKENEMDRAFE 269

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM++ G+  D  +Y   +  LC  G ++ A +LF+++     + +   Y+ +I G  
Sbjct: 270 MLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYG 329

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + G    A  L   + +  LI +V +Y + I  LC +GK  +A  L  DME
Sbjct: 330 REGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDME 380



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 150/288 (52%), Gaps = 6/288 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL  ++R  G EPN++TYN L+   CRTG    A  LF+EM       GVV   N V+Y 
Sbjct: 94  ALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLK----GVV--RNVVSYN 147

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I GLC+ G +  A +LF  M+ E I+P++VT+N LI G+  A   + A   F +M   
Sbjct: 148 ILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAA 207

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+QP+VV++N ++   C+   +  A R    M +  + P    Y  L+  F     ++RA
Sbjct: 208 GLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRA 267

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            E+   ME  G + +V SY +L++  C   ++  A  L+  M SKG+KP+ V+Y+ +  G
Sbjct: 268 FEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYG 327

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
                   +A +L  EM++ G+  +  +Y   I  LC  G   EA  L
Sbjct: 328 YGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEAL 375



 Score =  155 bits (391), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 1/301 (0%)

Query: 70  LCKEGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           LC    V  A  +  +  K  +   +V    +L+HG C + D  EA+ +F  M   GV P
Sbjct: 12  LCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTP 71

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N V++  +++     G+ +    L+  M + GV PN + YN L+  +C TG    A  LF
Sbjct: 72  NEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLF 131

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G   NV SY+ILI G C++ +++ A  L+  M  +GI P +V +N L  G  + 
Sbjct: 132 DEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKA 191

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            ++  A   F++M+  G+      Y   I G C+   I  A+  F  ++  +       Y
Sbjct: 192 GKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTY 251

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             LI    K   +  A+E+   + +  L  DV +Y +++HALC +GKM  AR LF  M++
Sbjct: 252 TILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDS 311

Query: 369 K 369
           K
Sbjct: 312 K 312



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 131/276 (47%), Gaps = 6/276 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++ + G   NV +YN LI GLCR G    A  LFE M            P+ VT
Sbjct: 127 ARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREG------IHPSMVT 180

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +IDG  K G +  A   F +MK   + P+VVTYN LI GFC A D   A   F +M 
Sbjct: 181 FNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMK 240

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ + P  V++ +++    K  +MD A  +L  M + G+  +   Y  L+   C+ G++ 
Sbjct: 241 ERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMM 300

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +LF SM+S G K N   Y ++I GY +      AL L  EM   G+ P+V  Y    
Sbjct: 301 HARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTI 360

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
             L    + + A  L  +M+  G+       R   D
Sbjct: 361 RLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFD 396



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 120/249 (48%), Gaps = 6/249 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA LF  +R  G  P++ T+N LI+G  + G    AL+ F +M           +P+ V
Sbjct: 161 DAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAG------LQPSVV 214

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G C+   +  A   F  MK+  + P  VTY  LI  F   N+ + A  +  EM
Sbjct: 215 TYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEM 274

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++ +V S+ V+++ LC  GKM  A +L + M   GV+PN  +Y+ ++ G+   G  
Sbjct: 275 EKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSS 334

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  L + M   G   NV SY + I   C   + + A +L  +M   G++    I   L
Sbjct: 335 YKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVL 394

Query: 242 FIGLFEIHQ 250
           F     +H 
Sbjct: 395 FDAKARLHS 403


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G  PNVF Y  LI   CR G    A  +F  M     + G+    N   YT 
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRM----DDLGLAA--NQYIYTI 182

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G  K+G+     EL+ KMK   + PN+ TYNSLI  +C     + A  +F E+  +G
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V  N V++N+++  LC+ G++ +A  LLE M +  + P    +N LMDG C TG++++A 
Sbjct: 243 VACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKAL 302

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
                ++ +G    + +Y+ILI+G+ K         L  EM  +GI P  V Y  L    
Sbjct: 303 SYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTF 362

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                +E+A+++F  M+R G+  D   Y   I GLC  G +VEA +L++++  +  + + 
Sbjct: 363 VRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPND 422

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I+G CK      A +    + +  +  +V +Y   I  LC DGK  +A+ L  +
Sbjct: 423 VIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKE 482

Query: 366 M 366
           M
Sbjct: 483 M 483



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 151/304 (49%), Gaps = 1/304 (0%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+   +   ++++ + F  M  +  +P+  ++N+ +     + + +     F E + + 
Sbjct: 44  VINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR- 102

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            Q +V SF + +   C+NG + +   LL  M  +GV PN F+Y  L++  C  G +++A+
Sbjct: 103 TQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK 162

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +F  M+ +G   N + Y+I+ING+ K    +    LY +M   G+ P++  YN+L    
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEY 222

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               ++  AFK+FDE+ + GVA +   Y   I GLC+ G + +A  L   ++        
Sbjct: 223 CRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTT 282

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           R +N L+DGLC +G+L  A      L    L   +VTYNI+I      G      +L  +
Sbjct: 283 RTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVRE 342

Query: 366 MEAK 369
           ME +
Sbjct: 343 MEDR 346



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 6/264 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   G   N  TYN LI GLCR G    A  L E M   +        P T T
Sbjct: 231 AFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAH------INPTTRT 284

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++DGLC  G +DKA     K+K   + P +VTYN LI GF    + +    L  EM 
Sbjct: 285 FNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME 344

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ P+ V++ ++MN   ++  +++A  +  LM +IG+ P+   Y  L+ G C+ G + 
Sbjct: 345 DRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMV 404

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L+ SM  M  + N   Y+ +INGYCK      AL    EM+  G+ P+V  Y +  
Sbjct: 405 EASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTI 464

Query: 243 IGLFEIHQVERAFKLFDEMQRHGV 266
             L +  +   A +L  EM   G+
Sbjct: 465 QILCKDGKSIEAKRLLKEMTEAGL 488



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 150/306 (49%), Gaps = 1/306 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P++ ++   +D L K G +D+    F +        +V ++   I  FC   + ++   L
Sbjct: 71  PSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT-QFDVYSFWITIKAFCENGNVSKGFEL 129

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M   GV PNV  + +++   C+NG +D+A  +   M  +G+  N ++Y  +++GF  
Sbjct: 130 LAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFK 189

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G      EL+  M+ +G   N+++Y+ LI  YC++ ++  A  ++ E+  +G+  + V 
Sbjct: 190 KGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  GL    QV +A  L + M+R  +   T  +   +DGLC  G + +A+     L+
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           ++     +  YN LI G  K G   +  EL R +    +    VTY I+++       ++
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIE 369

Query: 358 KARDLF 363
           KA ++F
Sbjct: 370 KAYEMF 375



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 133/298 (44%), Gaps = 76/298 (25%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ K+++ G  PN++TYN+LI   CR G   +A  +F+E++    + GV C  N VTY  
Sbjct: 199 LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS----KRGVAC--NAVTYNI 252

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPN------------------------------- 94
           +I GLC++G V KA+ L  +MK  +INP                                
Sbjct: 253 LIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIG 312

Query: 95  ----VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE----------- 139
               +VTYN LI GF    + +    L  EM D+G+ P+ V++ ++MN            
Sbjct: 313 LCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAY 372

Query: 140 ------------------------LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
                                   LC  G M EAS+L + M+++ ++PN  +YNT+++G+
Sbjct: 373 EMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGY 432

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           C      +A +    M   G   NV SY   I   CK+ +   A  L  EM   G+KP
Sbjct: 433 CKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA+ L+  +     +PN   YNT+ING C+  ++  AL   EEM   NG       PN 
Sbjct: 404 VEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK-NG-----VTPNV 457

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
            +Y + I  LCK+G   +AK L  +M +  + P
Sbjct: 458 ASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490


>gi|226499896|ref|NP_001150085.1| EMB2745 [Zea mays]
 gi|195636584|gb|ACG37760.1| EMB2745 [Zea mays]
 gi|414879767|tpg|DAA56898.1| TPA: EMB2745 [Zea mays]
          Length = 410

 Score =  193 bits (490), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 189/350 (54%), Gaps = 6/350 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V     L++  C++G    A  +F+ M       GV   PN VTYT +I+G    G  +
Sbjct: 37  DVAACTALVHVCCQSGDVAEARRVFDVMPR----LGVA--PNEVTYTALINGYFVRGHRE 90

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
               LF +M+ + + PN+ TYN LI  +C   ++  A+ LF EM  +GV  NVVS+N+++
Sbjct: 91  MGFALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVKGVVHNVVSYNILI 150

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC++ K+ +A +L E M + G+RP+   +N L+DG+   G++  A   F  M++ G  
Sbjct: 151 AGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAGLP 210

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +V +Y+ LI G+C+ ++I  A+  + +M  +G+ P  V Y  L     + ++++RAF +
Sbjct: 211 PSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMM 270

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             EM++ G+  D  +Y   +  LC  G ++ A +LF+++ +   + +   Y+ +I G  +
Sbjct: 271 LSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGR 330

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            G    A  L   + +  LI +V +Y + I  LC +GK  +A  L  DME
Sbjct: 331 EGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDME 380



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 147/289 (50%), Gaps = 6/289 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF ++R  G EPN++TYN LI   CRTG    A  LF+EM       GVV   N V+Y 
Sbjct: 94  ALFAEMRRDGVEPNLYTYNCLIGEWCRTGEFKSARLLFDEMPVK----GVV--HNVVSYN 147

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I GLC+   +  A +LF  M+ E I P++VT+N LI G+  A     A   F +M   
Sbjct: 148 ILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAA 207

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ P+VV++N ++   C+   +  A R    M + G+ P    Y  L+  F     ++RA
Sbjct: 208 GLPPSVVTYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRA 267

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +   ME  G + +V SY +L++  C   ++  A  L+  M  KG+KP+ V+Y+ +  G
Sbjct: 268 FMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYG 327

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
                   +A +L  EM+++G+  +  +Y   I  LC  G   EA  L 
Sbjct: 328 YGREGSSYKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALI 376



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 146/311 (46%), Gaps = 1/311 (0%)

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
             +   ++  LC    V  A  +  +  K  +   +V    +L+H  C + D  EA+ +F
Sbjct: 2   AASTAAVVRRLCVAAEVRSALAVLARGTKSGDAALDVAACTALVHVCCQSGDVAEARRVF 61

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M   GV PN V++  ++N     G  +    L   M + GV PN + YN L+  +C T
Sbjct: 62  DVMPRLGVAPNEVTYTALINGYFVRGHREMGFALFAEMRRDGVEPNLYTYNCLIGEWCRT 121

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G    A  LF  M   G  HNV SY+ILI G C++ +++ A+ L+  M  +GI+P +V +
Sbjct: 122 GEFKSARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREGIRPSIVTF 181

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N L  G  +  ++  A   F++M+  G+      Y   I G C+   I  AV  F  ++ 
Sbjct: 182 NLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDMKE 241

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                    Y  LI    K   +  A+ +   + +  L  DV +Y +++HALC +GKM  
Sbjct: 242 RGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMH 301

Query: 359 ARDLFLDMEAK 369
           AR LF  M+ K
Sbjct: 302 ARKLFQSMDLK 312



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 134/278 (48%), Gaps = 6/278 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF ++ V G   NV +YN LI GLCR      A+ LFE M           +P+ V
Sbjct: 126 SARLLFDEMPVKGVVHNVVSYNILIAGLCRHSKLKDAVQLFEAMRREG------IRPSIV 179

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +IDG  K G +  A   F +MK   + P+VVTYN LI GFC   D   A   F++M
Sbjct: 180 TFNLLIDGYGKAGKMANALHFFNQMKAAGLPPSVVTYNELICGFCRVRDIARAVRAFLDM 239

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P  V++ +++    K  +MD A  +L  M + G+  +   Y  L+   C+ G++
Sbjct: 240 KERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEMEKAGLEVDVQSYGVLLHALCMEGKM 299

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF SM+  G K N   Y ++I GY +      AL L  EM   G+ P+V  Y   
Sbjct: 300 MHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSSYKALRLIMEMRKNGLIPNVASYCLT 359

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
              L    + + A  L D+M+  G+       R  +D 
Sbjct: 360 IRLLCNEGKCQEAEALIDDMEHAGLQTSETICRILLDA 397



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 6/248 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF  +R  G  P++ T+N LI+G  + G    AL+ F +M            P+ V
Sbjct: 161 DAVQLFEAMRREGIRPSIVTFNLLIDGYGKAGKMANALHFFNQMKAAG------LPPSVV 214

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G C+   + +A   FL MK+  + P  VTY  LI  F   N+ + A  +  EM
Sbjct: 215 TYNELICGFCRVRDIARAVRAFLDMKERGLAPTKVTYTILIAAFAKENEMDRAFMMLSEM 274

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++ +V S+ V+++ LC  GKM  A +L + M   GV+PN+ +Y+ ++ G+   G  
Sbjct: 275 EKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDLKGVKPNSVLYDMMIYGYGREGSS 334

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  L + M   G   NV SY + I   C   + + A +L  +M   G++    I   L
Sbjct: 335 YKALRLIMEMRKNGLIPNVASYCLTIRLLCNEGKCQEAEALIDDMEHAGLQTSETICRIL 394

Query: 242 FIGLFEIH 249
                 +H
Sbjct: 395 LDAKARLH 402


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 183/361 (50%), Gaps = 6/361 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L  ++   G  PNVF Y  LI   CR G    A  +F  M     + G+    N   YT 
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRM----DDLGLAA--NQYIYTI 182

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+G  K+G+     EL+ KMK   + PN+ TYNSLI  +C     + A  +F E+  +G
Sbjct: 183 MINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRG 242

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V  N V++N+++  LC+ G++ +A  LLE M +  + P    +N LMDG C TG++++A 
Sbjct: 243 VACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKAL 302

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
                ++ +G    + +Y+ILI+G+ K         L  EM  +GI P  V Y  L    
Sbjct: 303 SYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTF 362

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                +E+A+++F  M+R G+  D   Y   I GLC  G +VEA +L++++  +  + + 
Sbjct: 363 VRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPND 422

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN +I+G CK      A +    + +  +  +V +Y   I  LC DGK  +A+ L  +
Sbjct: 423 VIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKE 482

Query: 366 M 366
           M
Sbjct: 483 M 483



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 84/304 (27%), Positives = 151/304 (49%), Gaps = 1/304 (0%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+   +   ++++ + F  M  +  +P+  ++N+ +     + + +     F E + + 
Sbjct: 44  VINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDLLAKSGNLDRTWGFFTEYLGR- 102

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            Q +V SF + +   C+NG + +   LL  M  +GV PN F+Y  L++  C  G +++A+
Sbjct: 103 TQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAK 162

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +F  M+ +G   N + Y+I+ING+ K    +    LY +M   G+ P++  YN+L    
Sbjct: 163 VMFSRMDDLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEY 222

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               ++  AFK+FDE+ + GVA +   Y   I GLC+ G + +A  L   ++        
Sbjct: 223 CRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTT 282

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           R +N L+DGLC +G+L  A      L    L   +VTYNI+I      G      +L  +
Sbjct: 283 RTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVRE 342

Query: 366 MEAK 369
           ME +
Sbjct: 343 MEDR 346



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 132/264 (50%), Gaps = 6/264 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   G   N  TYN LI GLCR G    A  L E M   +        P T T
Sbjct: 231 AFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAH------INPTTRT 284

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++DGLC  G +DKA     K+K   + P +VTYN LI GF    + +    L  EM 
Sbjct: 285 FNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREME 344

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+ P+ V++ ++MN   ++  +++A  +  LM +IG+ P+   Y  L+ G C+ G + 
Sbjct: 345 DRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMV 404

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +L+ SM  M  + N   Y+ +INGYCK      AL    EM+  G+ P+V  Y +  
Sbjct: 405 EASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTI 464

Query: 243 IGLFEIHQVERAFKLFDEMQRHGV 266
             L +  +   A +L  EM   G+
Sbjct: 465 QILCKDGKSIEAKRLLKEMTEAGL 488



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/306 (26%), Positives = 150/306 (49%), Gaps = 1/306 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P++ ++   +D L K G +D+    F +        +V ++   I  FC   + ++   L
Sbjct: 71  PSSFSFNNALDLLAKSGNLDRTWGFFTEYLGRT-QFDVYSFGITIKAFCENGNVSKGFEL 129

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M   GV PNV  + +++   C+NG +D+A  +   M  +G+  N ++Y  +++GF  
Sbjct: 130 LAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFFK 189

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G      EL+  M+ +G   N+++Y+ LI  YC++ ++  A  ++ E+  +G+  + V 
Sbjct: 190 KGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVT 249

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  GL    QV +A  L + M+R  +   T  +   +DGLC  G + +A+     L+
Sbjct: 250 YNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLK 309

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           ++     +  YN LI G  K G   +  EL R +    +    VTY I+++       ++
Sbjct: 310 LIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIE 369

Query: 358 KARDLF 363
           KA ++F
Sbjct: 370 KAYEMF 375



 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 133/298 (44%), Gaps = 76/298 (25%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ K+++ G  PN++TYN+LI   CR G   +A  +F+E++    + GV C  N VTY  
Sbjct: 199 LYQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEIS----KRGVAC--NAVTYNI 252

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPN------------------------------- 94
           +I GLC++G V KA+ L  +MK  +INP                                
Sbjct: 253 LIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIG 312

Query: 95  ----VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE----------- 139
               +VTYN LI GF    + +    L  EM D+G+ P+ V++ ++MN            
Sbjct: 313 LCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAY 372

Query: 140 ------------------------LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
                                   LC  G M EAS+L + M+++ ++PN  +YNT+++G+
Sbjct: 373 EMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGY 432

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           C      +A +    M   G   NV SY   I   CK+ +   A  L  EM   G+KP
Sbjct: 433 CKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA+ L+  +     +PN   YNT+ING C+  ++  AL   EEM   NG       PN 
Sbjct: 404 VEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVK-NG-----VTPNV 457

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
            +Y + I  LCK+G   +AK L  +M +  + P
Sbjct: 458 ASYISTIQILCKDGKSIEAKRLLKEMTEAGLKP 490


>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Glycine max]
          Length = 615

 Score =  192 bits (489), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL++++   G  P ++ +N L++G C+ G    A  +F+E+           +P  V++ 
Sbjct: 234 ALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRG------LRPTVVSFN 287

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I G CK G V++   L   M+ E + P+V T+++LI+G C     +E   LF EM  +
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN V+F  +++  CK GK+D A +  ++M+  GVRP+   YN L++G C  G +  A
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 407

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M + G K +  +++ LI+G CK+ ++E AL +   M+ +GI+ D V +  L  G
Sbjct: 408 RRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISG 467

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    +V  A ++  +M   G   D   Y   ID  CK G +    +L + ++   +   
Sbjct: 468 LCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPG 527

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           +  YN L++GLCK G++K A  L  ++    +  + +TYNI++      G
Sbjct: 528 VVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 164/293 (55%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++++  L+L++ D    P +  +N L+HGFC A D   A+ +F E+  +G++P VVSFN 
Sbjct: 229 IERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNT 288

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  CK+G ++E  RL  +M   GV P+ F ++ L++G C  GR++    LF  M   G
Sbjct: 289 LISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRG 348

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              N  +++ LI+G CK  +++ AL  +  ML++G++PD+V YN L  GL ++  ++ A 
Sbjct: 349 LVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEAR 408

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L +EM   G+  D   + T IDG CK+G +  A+E+ R +     ELD  A+  LI GL
Sbjct: 409 RLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGL 468

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           C+ GR+  A  +   +       D  TY ++I   C  G +     L  +M++
Sbjct: 469 CREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQS 521



 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 166/306 (54%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P    +  ++ G CK G V  A+ +F ++    + P VV++N+LI G C + D  E   L
Sbjct: 246 PKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL 305

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M  +GV P+V +F+ ++N LCK G++DE S L + M   G+ PN   + TL+DG C 
Sbjct: 306 KGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCK 365

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+V+ A + F  M + G + ++ +Y+ LING CK  +++ A  L +EM + G+KPD + 
Sbjct: 366 GGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKIT 425

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           + TL  G  +   +E A ++   M   G+  D  A+   I GLC+ G + +A  +   + 
Sbjct: 426 FTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDML 485

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              ++ D   Y  +ID  CK G +K+ ++L + +     +  VVTYN +++ LC  G+M 
Sbjct: 486 SAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMK 545

Query: 358 KARDLF 363
            A+ L 
Sbjct: 546 NAKMLL 551



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 109/307 (35%), Positives = 170/307 (55%), Gaps = 9/307 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+VFT++ LINGLC+ G       LF+EM       G+V  PN VT+TT+IDG CK 
Sbjct: 313 GVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR----GLV--PNGVTFTTLIDGQCKG 366

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A + F  M  + + P++VTYN+LI+G C   D  EA+ L  EM   G++P+ ++F
Sbjct: 367 GKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITF 426

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++  CK+G M+ A  +   M++ G+  +   +  L+ G C  GRV+ A  +   M S
Sbjct: 427 TTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLS 486

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K +  +Y+++I+ +CK  +++    L  EM S G  P VV YN L  GL +  Q++ 
Sbjct: 487 AGFKPDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKN 546

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L D M   GVA +   Y   +DG  K+G  V+ V++F + + L    D  +Y  L++
Sbjct: 547 AKMLLDAMLNVGVAPNDITYNILLDGHSKHGSSVD-VDIFNSEKGLVT--DYASYTALVN 603

Query: 314 GLCKSGR 320
              K+ +
Sbjct: 604 ESSKTSK 610



 Score =  176 bits (446), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   G  P V ++NTLI+G C++G       L      G  E   VC P+  T
Sbjct: 267 ARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRL-----KGVMESEGVC-PDVFT 320

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           ++ +I+GLCKEG +D+   LF +M    + PN VT+ +LI G C     + A   F  M+
Sbjct: 321 FSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMML 380

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QGV+P++V++N ++N LCK G + EA RL+  M   G++P+   + TL+DG C  G + 
Sbjct: 381 AQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDME 440

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A E+   M   G + +  +++ LI+G C+   +  A  + ++MLS G KPD   Y  + 
Sbjct: 441 SALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVI 500

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +   V+  FKL  EMQ  G       Y   ++GLCK G +  A  L   +  +   
Sbjct: 501 DCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVA 560

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
            +   YN L+DG  K G   +  ++F S     L+ D  +Y  +++
Sbjct: 561 PNDITYNILLDGHSKHGS-SVDVDIFNS--EKGLVTDYASYTALVN 603



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 146/278 (52%), Gaps = 11/278 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           E + LF ++   G  PN  T+ TLI+G C+ G   +AL  F+ M A G        +P+ 
Sbjct: 336 EGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQG-------VRPDL 388

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I+GLCK G + +A+ L  +M    + P+ +T+ +LI G C   D   A  +   
Sbjct: 389 VTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRR 448

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G++ + V+F  +++ LC+ G++ +A R+L  M+  G +P+   Y  ++D FC  G 
Sbjct: 449 MVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGD 508

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V    +L   M+S G    V +Y+ L+NG CK  +++ A  L   ML+ G+ P+ + YN 
Sbjct: 509 VKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNI 568

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           L  G    H       +F+  +  G+  D  +Y   ++
Sbjct: 569 LLDG-HSKHGSSVDVDIFNSEK--GLVTDYASYTALVN 603



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 76/155 (49%)

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           EIE + +LY E+L  G  P +  +N L  G  +   V  A  +FDE+ + G+     ++ 
Sbjct: 228 EIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFN 287

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T I G CK+G + E   L   +       D+  ++ LI+GLCK GRL     LF  +   
Sbjct: 288 TLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGR 347

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L+ + VT+  +I   C  GK+D A   F  M A+
Sbjct: 348 GLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQ 382


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/365 (31%), Positives = 191/365 (52%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF ++   G  P+ FTYN LI+ LC+      ALNL+E+M     E GV  KP  V
Sbjct: 370 DAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM----NETGV--KPYIV 422

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++   C  G +D+A +L+ +M  +   PNVVTY +L+ G      +++A  L  EM
Sbjct: 423 TYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEM 482

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  N  ++N ++N LC  G++ E   +L+     G  P A  YN++++GF   G +
Sbjct: 483 KQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  ++  M + G   N+ +Y+  I+GYCK    + AL + +++  KG++PD+  YN+L
Sbjct: 543 GSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSL 602

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +  A ++   M + G+  +   Y +FI G      + EA+ L+  +     
Sbjct: 603 IFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGI 662

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LD   Y  LIDG  K G +  A +L+  +     I D +T+  + H LC +G +D AR 
Sbjct: 663 DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARK 722

Query: 362 LFLDM 366
           L  +M
Sbjct: 723 LLDEM 727



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/358 (32%), Positives = 181/358 (50%), Gaps = 8/358 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PNV TY TL+ G         A  L  EM       GV C  N  
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQN----GVSC--NDY 492

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GLC  G V +  E+  + + E   P  +TYNS+I+GF  A     A  ++ +M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN+V++   ++  CK    D A ++L  +   G+RP+   YN+L+ GFC  G +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNM 612

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++ V M   G   N+  Y+  I GY   K +E AL LY +M+ +GI  D   Y TL
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTL 672

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V  A KL+ EM   G   D   +     GLC+NG I +A +L   +  L  
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI--HALCADGKMD 357
             ++  YN LI+G  ++G+L+ A+ L   +    ++ D  TY+I++   +L +D  +D
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSDSPID 790



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 178/365 (48%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  +L   G + +V    TL++G C       AL++FEE        G+V  P  V
Sbjct: 265 EALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD----GLV--PTDV 318

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G  +EG  +KA EL  +M+D  + P+   +N +I G      W +A  LF EM
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM 378

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+  ++N++++ LC+  K+ EA  L E M + GV+P    Y++L+  +C+ G +
Sbjct: 379 ADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCM 437

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L+  M   G   NV +Y+ L+ G+      + A +L +EM   G+  +   YNTL
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTL 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +V    ++    +  G       Y + I+G  K G +  A  +++ +     
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  Y   IDG CK+    +A ++   +    L  D+  YN +I   C +G M  A  
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQ 617

Query: 362 LFLDM 366
           + + M
Sbjct: 618 VLVLM 622



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +  K++  G  P  FT+N++++ L + G    AL++ +E+     +  VV      
Sbjct: 230 RALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA---- 285

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             TT++ G C +  V KA ++F +   + + P  VTY  LI G        +A  L  +M
Sbjct: 286 --TTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM 343

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+   FN+++  L  +    +A  L + M   G+ P+AF YN L+   C   ++
Sbjct: 344 RDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKI 402

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   G K  + +Y  L+  YC N  ++ A+ LY+EM  KG  P+VV Y TL
Sbjct: 403 REALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G       ++A+ L  EM+++GV+ + + Y T I+GLC  G + E  E+ +      +
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 YN +I+G  K+G +  A+ +++ +    +  ++VTY   I   C     D A  
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 362 LFLDMEAK 369
           +  D+  K
Sbjct: 583 MLNDVRCK 590



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 133/296 (44%), Gaps = 1/296 (0%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           KEG  D A  LF +M    I P+    +  I   C   D N A  +  +M D G  P   
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FN +++ L K G+M+EA  + + ++  G + +  +  TLM G+CL   V +A ++F   
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G      +Y++LI G  +    E A  L  +M   G+ P    +N +  GL      
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           + A  LF EM   G+  D + Y   I  LC+   I EA+ L+  +     +  I  Y+ L
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +   C +G +  A +L+  +P      +VVTY  ++         DKA  L  +M+
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 37/241 (15%)

Query: 162 RP-NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           RP +A++++ +M      G  + A  LF  M +   + +    S+ I   CK ++   AL
Sbjct: 173 RPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRAL 232

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  +M   G  P    +N++   L +  ++E A  + DE+   G         T + G 
Sbjct: 233 LVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGY 292

Query: 281 CKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS------LP- 332
           C    + +A+++F  TLR      D+  Y  LI G  + G  + A+EL R       LP 
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPS 351

Query: 333 --------RGVL-------------------IADVVTYNIMIHALCADGKMDKARDLFLD 365
                   +G+L                   I D  TYNI+IH LC   K+ +A +L+  
Sbjct: 352 TNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEK 411

Query: 366 M 366
           M
Sbjct: 412 M 412



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 76/174 (43%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           SME+ G   +  S + L+    ++     AL+L +EM  KG   D  +++ +    F+  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEG 191

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
             + A +LFDEM    +  D       I  LCK      A+ + R ++   +      +N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ++D L K GR++ A  +   L        VV    ++H  C   ++ KA D+F
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIF 305


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 185/399 (46%), Gaps = 47/399 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---KP 58
           +A  +F ++      PN  TYNT+I+G  + G       L ++M         VC   KP
Sbjct: 81  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM---------VCHGLKP 131

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N +TY  ++ GLC+ G + +   L  +M  + + P+  TY+ L  G     D      LF
Sbjct: 132 NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF 191

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            + +  GV     + ++++N LCK+GK+  A  +L+ ++  G+ P   +YNTL++G+C T
Sbjct: 192 GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 251

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A   F  M+S   K +  +Y+ LING CK + I  A  L  EM   G+ P V  +
Sbjct: 252 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 311

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE------- 291
           NTL        Q+E+ F +  EMQ +G+  +  +Y + ++  CKNG I EAV        
Sbjct: 312 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 371

Query: 292 ----------------------------LFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
                                       L   ++       I  YN LI GLC   ++  
Sbjct: 372 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 431

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           A E+  SL    LI D V+YN +I A C  G +DKA DL
Sbjct: 432 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 470



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF K    G     +T + L+NGLC+ G   +A  + + + N     G+V  P  V Y 
Sbjct: 189 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA----GLV--PTRVIYN 242

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G C+ G ++ A   F +MK  +I P+ +TYN+LI+G C A     A+ L +EM D 
Sbjct: 243 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 302

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P V +FN +++   + G++++   +L  M + G++PN   Y ++++ FC  G++  A
Sbjct: 303 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 362

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +   M       N   Y+ +I+ Y ++   + A  L  +M S GI P +V YN L  G
Sbjct: 363 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 422

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    Q+  A ++ + +  H +  D  +Y T I   C  G I +A++L + +     +  
Sbjct: 423 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 482

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +R Y+ LI GL  +GRL     L++ + +  ++     +NIM+ A    G   KA DL  
Sbjct: 483 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 542

Query: 365 DMEAK 369
           +M  K
Sbjct: 543 EMLQK 547



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E +AL  ++      P+ FTY+ L +GL R G +   L+LF +        G        
Sbjct: 151 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DY 204

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +++GLCK+G V  A+E+   + +  + P  V YN+LI+G+C   +   A   F +M
Sbjct: 205 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 264

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +++N ++N LCK  ++  A  LL  M   GV P    +NTL+D +  TG++
Sbjct: 265 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 324

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P+  +YN +
Sbjct: 325 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 384

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E    ++AF L ++M+ +G++     Y   I GLC    I EA E+  +L   + 
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 444

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +YN LI   C  G +  A +L + + +  + + V TY+ +I  L   G++++   
Sbjct: 445 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 504

Query: 362 LFLDM 366
           L+  M
Sbjct: 505 LYQKM 509



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 151/312 (48%), Gaps = 5/312 (1%)

Query: 52  FGVVC----KPNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFC 106
           FG++     +P+T  +   +      G + +A  +  +M +D    PN  +YN +I G  
Sbjct: 15  FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 74

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
            A    +A  +F EM ++ V PN +++N +++   K G ++   RL + M+  G++PNA 
Sbjct: 75  RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 134

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            YN L+ G C  GR+     L   M S     + F+YSIL +G  +N + +  LSL+ + 
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 194

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L  G+       + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             A   F  ++    + D   YN LI+GLCK+ R+  A +L   +    +   V T+N +
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 314

Query: 347 IHALCADGKMDK 358
           I A    G+++K
Sbjct: 315 IDAYGRTGQLEK 326



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 6/294 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F +++    +P+  TYN LINGLC+      A +L  EM + NG       P   T
Sbjct: 257 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD-NG-----VNPTVET 310

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+ID   + G ++K   +  +M++  + PNVV+Y S+++ FC      EA  +  +M 
Sbjct: 311 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 370

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V PN   +N I++   ++G  D+A  L+E M   G+ P+   YN L+ G C   +++
Sbjct: 371 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 430

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEE+  S+ +     +  SY+ LI+  C    I+ AL L   M   GIK  V  Y+ L 
Sbjct: 431 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 490

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            GL    ++     L+ +M ++ V      +   ++   K G  ++A +L + +
Sbjct: 491 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K++  G  P++ TYN LI GLC       A  +   ++N          P+ V
Sbjct: 396 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR------LIPDAV 449

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I   C  G +DKA +L  +M    I   V TY+ LI G   A   NE + L+ +M
Sbjct: 450 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 509

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M   V P+    N+++    K G   +A  L + M+Q
Sbjct: 510 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 546



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 1/145 (0%)

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA-DTWAYRTFIDGLCKNG 284
           + S G +PD   +N           +  A  +   M R G    + ++Y   I G+ + G
Sbjct: 18  LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              +AVE+F  +       +   YN +IDG  K G L+  + L   +    L  + +TYN
Sbjct: 78  RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 137

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
           +++  LC  G+M +   L  +M ++
Sbjct: 138 VLLSGLCRAGRMGETSALLDEMASQ 162


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/369 (31%), Positives = 191/369 (51%), Gaps = 12/369 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +    C  + +TY+TL++GLC  G    A++L +EM    G F     PN V
Sbjct: 193 QAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEM-QVEGTF-----PNPV 246

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I  LCK+G + +A +L   M  +   PN VTYNSL+HG C     ++A  L   M
Sbjct: 247 AFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRM 306

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +     PN ++F  +++   K+G+  +  R+L  + + G R N F Y++L+ G    G+ 
Sbjct: 307 VANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKG 366

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +L+  M   GCK N   YS LI+G C+  + + A     EM +KG  P+   Y++L
Sbjct: 367 EHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSL 426

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G FE   + +A  ++ EM  +        Y   I+GLCKNG + EA+ +++ +     
Sbjct: 427 MWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGI 486

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL----PRGVLIADVVTYNIMIHALCADGKMD 357
           +LD+ AY+ +I G C +  ++   +LF  +    P+  L  DVVTYNI+++A C    + 
Sbjct: 487 KLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPK--LQPDVVTYNILLNAFCTKNSVS 544

Query: 358 KARDLFLDM 366
           +A D+   M
Sbjct: 545 RAIDILNTM 553



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 173/395 (43%), Gaps = 57/395 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A+ L   + + GC PN  TYN+L++GLC  G    A++L   M          C PN +
Sbjct: 263 RASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK------CVPNDI 316

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T++DG  K G       + + ++++    N  +Y+SLI G            L+ EM
Sbjct: 317 TFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEM 376

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G +PN + ++ +++ LC+ GK DEA   L  M   G  PN+F Y++LM G+   G +
Sbjct: 377 VEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDI 436

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK--------- 232
           ++A  ++  M    C H+   YSILING CKN +++ AL ++ +MLS+GIK         
Sbjct: 437 HKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSM 496

Query: 233 ----------------------------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
                                       PDVV YN L       + V RA  + + M   
Sbjct: 497 IHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQ 556

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   D      F+  L  N      ++  +  R    EL +R        L K  R   A
Sbjct: 557 GCDPDFITCDIFLKTLRDN------MDPPQDGREFLDELVVR--------LIKRQRTVGA 602

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +   + +  L+    T+ + +  LC   K+ K 
Sbjct: 603 SNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKT 637



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 137/238 (57%), Gaps = 8/238 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++   + + L   G   N F+Y++LI+GL + G     + L++EM          CKPNT
Sbjct: 332 LDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG------CKPNT 385

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y+ +IDGLC+EG  D+AKE  ++MK++   PN  TY+SL+ G+  A D ++A  ++ E
Sbjct: 386 IVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKE 445

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D     + V +++++N LCKNGK+ EA  + + M+  G++ +   Y++++ GFC    
Sbjct: 446 MTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQL 505

Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           V +  +LF  M   +   + +V +Y+IL+N +C    +  A+ + + ML +G  PD +
Sbjct: 506 VEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFI 563



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/372 (26%), Positives = 171/372 (45%), Gaps = 39/372 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIV---ALNLFEEMANGNGEFGVVCK 57
           ++  +L   L    CE  VF   + I      G   +   AL+LF  M     EF   CK
Sbjct: 79  LDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMG---AEFH--CK 133

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
               ++ T+++ + +EG  D A E                YN +I    ++N        
Sbjct: 134 QTVKSFNTVLNVVIQEGCFDLALEF---------------YNHVIDSNSFSN-------- 170

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
                   +QPN +SFN+++  LC+ G +D+A  +   M       + + Y+TLM G C 
Sbjct: 171 --------IQPNGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCN 222

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR++ A  L   M+  G   N  ++++LI+  CK  ++  A  L   M  KG  P+ V 
Sbjct: 223 EGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVT 282

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN+L  GL    ++++A  L + M  +    +   + T +DG  K+G  ++ V +  +L 
Sbjct: 283 YNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLE 342

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
              Y  +  +Y+ LI GL K G+ +   +L++ +       + + Y+ +I  LC +GK D
Sbjct: 343 EKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPD 402

Query: 358 KARDLFLDMEAK 369
           +A++  ++M+ K
Sbjct: 403 EAKEYLIEMKNK 414


>gi|302756087|ref|XP_002961467.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
 gi|300170126|gb|EFJ36727.1| hypothetical protein SELMODRAFT_77006 [Selaginella moellendorffii]
          Length = 500

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/346 (33%), Positives = 177/346 (51%), Gaps = 9/346 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V T+  LI G C+      A  +F+EM   N      C+P+   Y  +IDG CKE
Sbjct: 41  GIHPDVVTFTALIRGFCKNRMVERAWEIFQEMIKSNR-----CQPDCFLYGVLIDGYCKE 95

Query: 74  GFVDKAKELFLKMK-DENINPNVVTYNSLIHGFCYANDWNEA-KCLFIEMMDQGVQPNVV 131
             +D+A EL  +M+ +  I P+VV YNS++ G C +N + EA K L   M+ QG  P VV
Sbjct: 96  LRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVRQGCSPTVV 155

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++  ++   CK  KM  A  +   M++  ++P    Y+ ++DG    GRV  A  +   M
Sbjct: 156 TYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYRVVREM 215

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           E++GC+ NV  Y+ LI+G CK+  ++ A +LY  M   G  P+   Y TL        + 
Sbjct: 216 ETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFCRNDRT 275

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           E A  LFD + R     D   Y   + GLC+   + +A  LFR +R+     D  AYN L
Sbjct: 276 ETALGLFDHI-RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLAGVSADTHAYNVL 334

Query: 312 IDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKM 356
           + G  +SGR + A+ +   L      +A+++TYN +I   C +  M
Sbjct: 335 LHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGM 380



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 171/313 (54%), Gaps = 4/313 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN   + ++ID L K   +  A      M D  I+P+VVT+ +LI GFC       A  +
Sbjct: 9   PNQHAFASLIDALSKSNRLGDAARALELMCDAGIHPDVVTFTALIRGFCKNRMVERAWEI 68

Query: 118 FIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGF 175
           F EM+     QP+   + V+++  CK  +MD A  LL E+ ++  ++P+  +YN+++DG 
Sbjct: 69  FQEMIKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGL 128

Query: 176 CLTGRVNRAEE-LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           C + R   A + L  +M   GC   V +Y+ LI G CK K+++ A+++++ ML + I+P 
Sbjct: 129 CRSNRFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPT 188

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +V Y+ +  GL +  +V  A+++  EM+  G   +   Y T IDGLCK+G++ +A  L+R
Sbjct: 189 IVSYSVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYR 248

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++      + R Y  LID  C++ R + A  LF  + R     DV  Y  ++  LC + 
Sbjct: 249 IMKRSGAFPNQRTYATLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRER 307

Query: 355 KMDKARDLFLDME 367
           ++D AR LF +M 
Sbjct: 308 RLDDARALFREMR 320



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/361 (32%), Positives = 189/361 (52%), Gaps = 20/361 (5%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C+P+ F Y  LI+G C+      AL L  EM           +P+ V Y +I+DGLC+  
Sbjct: 78  CQPDCFLYGVLIDGYCKELRMDRALELLREM-----RVERRIQPDVVIYNSIVDGLCRSN 132

Query: 75  -FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            F++  K L   M  +  +P VVTY SLI G C A     A  ++  M+++ +QP +VS+
Sbjct: 133 RFLEAWKFLDETMVRQGCSPTVVTYTSLIRGACKAKKMKLAMTIWNAMLERKIQPTIVSY 192

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +VI++ L K G++ +A R++  M  +G   N  +Y TL+DG C +G ++ A  L+  M+ 
Sbjct: 193 SVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKR 252

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP-DVVIYNTLFIGLFEIHQVE 252
            G   N  +Y+ LI+ +C+N   E AL L+  +  +   P DV +Y  +  GL    +++
Sbjct: 253 SGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCPLDVAMYTAVVSGLCRERRLD 310

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE----LDIRAY 308
            A  LF EM+  GV+ADT AY   + G  ++G   EA   FR L  L  +     ++  Y
Sbjct: 311 DARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEA---FRILEELGDDPGCVANLLTY 367

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N +I G C    + + +E+ +   RG+   D  TY+ +I  L   G++ +A DL  +M A
Sbjct: 368 NTVIAGCCLESGMVLFYEMRQ---RGI-APDFATYSALIDRLLGSGEIRRAFDLCEEMLA 423

Query: 369 K 369
            
Sbjct: 424 S 424



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 132/270 (48%), Gaps = 18/270 (6%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P + +Y+ +I+GL + G    A  +  EM        + C+ N V YTT+IDGLCK GF
Sbjct: 186 QPTIVSYSVIIDGLSKAGRVYDAYRVVREMET------LGCELNVVIYTTLIDGLCKSGF 239

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  L+  MK     PN  TY +LI  FC  ND  E      + +      +V  +  
Sbjct: 240 LDDAYALYRIMKRSGAFPNQRTYATLIDTFCR-NDRTETALGLFDHIRDYCPLDVAMYTA 298

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC+  ++D+A  L   M   GV  +   YN L+ G   +GR   +EE F  +E +G
Sbjct: 299 VVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHGAFRSGR---SEEAFRILEELG 355

Query: 196 ----CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
               C  N+ +Y+ +I G C    +E  + L+ EM  +GI PD   Y+ L   L    ++
Sbjct: 356 DDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEI 411

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            RAF L +EM   G++  +      +  LC
Sbjct: 412 RRAFDLCEEMLASGLSPPSGVLGRVVARLC 441



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 119/234 (50%), Gaps = 14/234 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   GCE NV  Y TLI+GLC++G    A  L+  M   +G F     PN  
Sbjct: 207 DAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKR-SGAF-----PNQR 260

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID  C+    + A  LF  ++D     +V  Y +++ G C     ++A+ LF EM
Sbjct: 261 TYATLIDTFCRNDRTETALGLFDHIRD-YCPLDVAMYTAVVSGLCRERRLDDARALFREM 319

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCL-TG 179
              GV  +  ++NV+++   ++G+ +EA R+L EL    G   N   YNT++ G CL +G
Sbjct: 320 RLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESG 379

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            V     LF  M   G   +  +YS LI+    + EI  A  L  EML+ G+ P
Sbjct: 380 MV-----LFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEEMLASGLSP 428



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 11/159 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ALF ++R+ G   +   YN L++G  R+G +  A  + EE+ +  G     C  N +
Sbjct: 311 DARALFREMRLAGVSADTHAYNVLLHGAFRSGRSEEAFRILEELGDDPG-----CVANLL 365

Query: 62  TYTTIIDGLCKE-GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY T+I G C E G V     LF +M+   I P+  TY++LI     + +   A  L  E
Sbjct: 366 TYNTVIAGCCLESGMV-----LFYEMRQRGIAPDFATYSALIDRLLGSGEIRRAFDLCEE 420

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           M+  G+ P       ++  LC + + D A++L+E+ + +
Sbjct: 421 MLASGLSPPSGVLGRVVARLCWSRRGDLAAKLIEMAMAV 459


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/366 (31%), Positives = 187/366 (51%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   GC+P+  TY  LI  LC  G    A NLF+EM          CKPN  
Sbjct: 284 EAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRG------CKPNVH 337

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDGLC++G +++A  +  KM  + I P+V+TYN+LI+G+C       A  L   M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +  +PNV +FN +M  LC+ GK  +A  LL+ M+  G+ P+   YN L+DG C  G +
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A +L  SM     + +  +++ +IN +CK  + + A +    ML KGI  D V   TL
Sbjct: 458 NTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTL 517

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+ ++ +   A  + + + +  +     +    +D L K   + E + +   +  L  
Sbjct: 518 IDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              +  Y  L+DGL +SG +  ++ +   +     + +V  Y I+I+ LC  G++++A  
Sbjct: 578 VPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEK 637

Query: 362 LFLDME 367
           L   M+
Sbjct: 638 LLSAMQ 643



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 181/366 (49%), Gaps = 22/366 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---- 57
           +A  LF ++   GC+PNV TY  LI+GLCR G          E ANG      VC+    
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI--------EEANG------VCRKMVK 364

Query: 58  ----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
               P+ +TY  +I+G CK+G V  A EL   M+     PNV T+N L+ G C      +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A  L   M+D G+ P++VS+NV+++ LC+ G M+ A +LL  M    + P+   +  +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            FC  G+ + A      M   G   +  + + LI+G CK  +   AL +   ++   I  
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILT 544

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
                N +   L +  +V+    +  ++ + G+      Y T +DGL ++G I  +  + 
Sbjct: 545 TPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRIL 604

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +++     ++  Y  +I+GLC+ GR++ A +L  ++    +  + VTY +M+     +
Sbjct: 605 ELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNN 664

Query: 354 GKMDKA 359
           GK+D+A
Sbjct: 665 GKLDRA 670



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 171/348 (49%), Gaps = 10/348 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y T++N LC+ G+T  A     ++     + G V   ++   T+++ G C+   +  A +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKIL----KIGFVL--DSHIGTSLLLGFCRGLNLRDALK 251

Query: 82  LFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +F  M  E    PN V+Y+ LIHG C      EA  L  +M ++G QP+  ++ V++  L
Sbjct: 252 VFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL 311

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C  G +D+A  L + MI  G +PN   Y  L+DG C  G++  A  +   M       +V
Sbjct: 312 CDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSV 371

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ LINGYCK+  +  A  L + M  +  KP+V  +N L  GL  + +  +A  L   
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M  +G++ D  +Y   IDGLC+ G++  A +L  ++     E D   +  +I+  CK G+
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             +A      + R  +  D VT   +I  +C   K+ K RD    +E 
Sbjct: 492 ADVASAFLGLMLRKGISLDEVTGTTLIDGVC---KVGKTRDALFILET 536



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 88/307 (28%), Positives = 156/307 (50%), Gaps = 6/307 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            C+PNV T+N L+ GLCR G    A++L + M + NG       P+ V+Y  +IDGLC+E
Sbjct: 401 ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLD-NG-----LSPDIVSYNVLIDGLCRE 454

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++ A +L   M   +I P+ +T+ ++I+ FC     + A      M+ +G+  + V+ 
Sbjct: 455 GHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTG 514

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++ +CK GK  +A  +LE ++++ +       N ++D      +V     +   +  
Sbjct: 515 TTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINK 574

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   +V +Y+ L++G  ++ +I G+  +   M   G  P+V  Y  +  GL +  +VE 
Sbjct: 575 LGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEE 634

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KL   MQ  GV+ +   Y   + G   NG +  A+E  R +    YEL+ R Y+ L+ 
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQ 694

Query: 314 GLCKSGR 320
           G   S +
Sbjct: 695 GFVLSQK 701



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 122/276 (44%), Gaps = 34/276 (12%)

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N   Y+SL+      +    A   +  M   G    ++ +  I+N LCKNG  + A   +
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             +++IG   ++ +  +L+ GFC    +  A ++F  M                     +
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVM---------------------S 257

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           KE+  A             P+ V Y+ L  GL E+ ++E AF L D+M   G    T  Y
Sbjct: 258 KEVTCA-------------PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              I  LC  G I +A  LF  +     + ++  Y  LIDGLC+ G+++ A  + R + +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +   V+TYN +I+  C DG++  A +L   ME +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 67/319 (21%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E  A+  K+   G  P+V TY TL++GL R+G    +  + E M          C PN  
Sbjct: 564 EELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG------CLPNVY 617

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY----------------------- 98
            YT II+GLC+ G V++A++L   M+D  ++PN VTY                       
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAM 677

Query: 99  ------------NSLIHGFCYANDW----------------NEAKCL--FIEMMDQ--GV 126
                       +SL+ GF  +                    + +C+   I +++Q  G 
Sbjct: 678 VERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGC 737

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
              +  F  ++  LCK G+ DE++ L++ +++ GV       + +M+ +C   +  +  E
Sbjct: 738 ISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTKCME 794

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGI--KPDVVIYNTLFI 243
           L   +   G   +  S+ ++I G  K  + E A  L  E+L S G+  K  V+ Y    +
Sbjct: 795 LITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLM 854

Query: 244 GLFEIHQVERAFKLFDEMQ 262
              E         L D++ 
Sbjct: 855 EGDETGDCSEVIDLVDQLH 873



 Score = 64.3 bits (155), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 5/133 (3%)

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G + +   Y++L + L ++     A+  +  M+  G       YRT ++ LCKNGY  EA
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEA 213

Query: 290 VELFRTLRILK--YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIM 346
            E+F + +ILK  + LD      L+ G C+   L+ A ++F  + + V  A + V+Y+I+
Sbjct: 214 AEMFMS-KILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSIL 272

Query: 347 IHALCADGKMDKA 359
           IH LC  G++++A
Sbjct: 273 IHGLCEVGRLEEA 285


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  192 bits (489), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 195/364 (53%), Gaps = 6/364 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F  + + G +P+V+T N ++  + +   T +  +LF EM++       +C PN  T
Sbjct: 182 AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG-----IC-PNVGT 235

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  +I+GLC EG + KA  L  +M++    P +VTYN+L++ +C    +  A  L   M+
Sbjct: 236 FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 295

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++ +V ++NV ++ LC N +  +A  LL+ M +  + PN   YNTL++GF   G++ 
Sbjct: 296 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 355

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A ++F  M       N  +Y+ LI G+C   + E AL L   M + G++ + V Y TL 
Sbjct: 356 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  + E A +L + M+ + +     AY   IDGLCKNG + EAV+L   +      
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y+ LI+G C+ G +K A E+   + R  L+ + + Y+ +I+  C  G + +A  +
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535

Query: 363 FLDM 366
           +  M
Sbjct: 536 YAVM 539



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 179/368 (48%), Gaps = 12/368 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---P 58
           +A  L  ++   G  P + TYNTL+N  C+ G    A+ L + M         +CK    
Sbjct: 251 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM---------ICKGIEA 301

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  TY   ID LC      KA  L  KM+ E I+PN VTYN+LI+GF        A  +F
Sbjct: 302 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 361

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM    + PN V++N ++   C  G  +EA RLL+ M   G+R N   Y TL++G C  
Sbjct: 362 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 421

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
            +   A+ L   M          +Y++LI+G CKN  ++ A+ L   M   G+ PDV+ Y
Sbjct: 422 EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 481

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           ++L  G   +  ++ A ++   M R G+  +   Y T I   C++G + EA++++  +  
Sbjct: 482 SSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNC 541

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             +  D    N L+  LC+ G+L  A +    + R  L+ + +TY+ +I+   + G    
Sbjct: 542 NGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLN 601

Query: 359 ARDLFLDM 366
           A   F DM
Sbjct: 602 AFSFFDDM 609



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 175/361 (48%), Gaps = 6/361 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA +F ++  F   PN  TYN LI G C  G    AL L + M           + N VT
Sbjct: 357 AAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG------LRLNEVT 410

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+++GLCK    + AK L  +M+  ++    + Y  LI G C     +EA  L   M 
Sbjct: 411 YGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMY 470

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             GV P+V++++ ++N  C+ G +  A  ++  M + G+  N  +Y+TL+  FC  G V 
Sbjct: 471 KDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVT 530

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +++  M   G   + F+ ++L++  C++ ++  A      M   G+ P+ + Y+ + 
Sbjct: 531 EAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 590

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G   I     AF  FD+M + G     + Y + + GLCK G +VEA +    L  +   
Sbjct: 591 NGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGA 650

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           +D   YN L+   CKSG L  A  LF  + +  ++ D  TY+ ++  LC  GK   A  L
Sbjct: 651 VDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCL 710

Query: 363 F 363
           F
Sbjct: 711 F 711



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 194/438 (44%), Gaps = 75/438 (17%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA ALF K+      P+ +TY++L+ GLCR G  + A+ LF   A G G       PN V
Sbjct: 671  EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT-AMGRGTL----FPNHV 725

Query: 62   TYTTIIDGLCKEG--------------------------FVD---------KAKELFLKM 86
             YT ++DGL K G                           +D         KA + F  M
Sbjct: 726  MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 785

Query: 87   KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
            +   + PN+ TYN L+HGF           L+  MM +G+ P+ ++F+ ++  L K+G  
Sbjct: 786  RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 845

Query: 147  DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            D   +LL  MI  G   + F +N L++ +  +G++ +A +L   M ++G   +  +Y+ +
Sbjct: 846  DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 905

Query: 207  INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
             NG  K      +  +  EML  G+ P    Y TL  G+  +  ++ AFKL DEM+  G 
Sbjct: 906  FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 965

Query: 267  AADTWAYRTFIDGL-----------------------------------CKNGYIVEAVE 291
             +   A    + GL                                   C++  I EA++
Sbjct: 966  GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1025

Query: 292  LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            L   + +   +LD+ AYN LI G+C +G    A+EL+  +    L  ++ TY +++ A+ 
Sbjct: 1026 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1085

Query: 352  ADGKMDKARDLFLDMEAK 369
            A   + +   L  D++ +
Sbjct: 1086 AANNLIQGEKLLTDLQER 1103



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 178/369 (48%), Gaps = 7/369 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A + F  +   G  P+ FTY +L+ GLC+ G+ + A      +    G        ++
Sbjct: 600 LNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV------DS 653

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T++   CK G + +A  LF KM   N+ P+  TY+SL+ G C       A CLF  
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713

Query: 121 MMDQGVQ-PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M +G   PN V +  +++ L K G    A    E M++ G  P+   +N ++D     G
Sbjct: 714 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 773

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ +A + F +M   G   N+ +Y+IL++G+ K + +   LSLYS M+ +GI PD + ++
Sbjct: 774 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 833

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L +GL +    +   KL  +M   G  AD + +   I+   ++G + +A +L   +  L
Sbjct: 834 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 893

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   YN + +GL K    + +  +   +    +I     Y  +I+ +C  G +  A
Sbjct: 894 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 953

Query: 360 RDLFLDMEA 368
             L  +MEA
Sbjct: 954 FKLKDEMEA 962



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 172/389 (44%), Gaps = 52/389 (13%)

Query: 30  CRTGHTIVALNLFE----------EMANGNGE-FGVV------CKPNTVTYTTIIDGLCK 72
           C T H +V   +++          +M  G+   FG +      C      +  +I    K
Sbjct: 116 CLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLK 175

Query: 73  EGFVDKAKE-----------------------------------LFLKMKDENINPNVVT 97
           EG +D A E                                   LF +M D+ I PNV T
Sbjct: 176 EGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGT 235

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +N LI+G C   +  +A  L  +M + G  P +V++N ++N  CK G+   A  L++ MI
Sbjct: 236 FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 295

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
             G+  +   YN  +D  C   R  +A  L   M       N  +Y+ LING+ K  +I 
Sbjct: 296 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 355

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +++EM    + P+ V YN L  G   +   E A +L D M+  G+  +   Y T +
Sbjct: 356 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GLCK+     A  L   +R+    +   AY  LIDGLCK+G L  A +L  ++ +  + 
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
            DV+TY+ +I+  C  G +  A+++   M
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRM 504



 Score =  144 bits (363), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 9/342 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           N   Y+TLI   C+ G+   A+ ++  M  NG+G     C         ++  LC++G +
Sbjct: 512 NKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTC-------NVLVSSLCRDGKL 564

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A++    M    + PN +TY+ +I+G+    D   A   F +M+  G  P+  ++  +
Sbjct: 565 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 624

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LCK G + EA + L  +  I    ++ +YNTL+   C +G ++ A  LF  M     
Sbjct: 625 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 684

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAF 255
             + ++YS L+ G C+  +   A+ L+   + +G + P+ V+Y  L  GL +    + AF
Sbjct: 685 LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 744

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
             F+EM + G   DT A+   ID   + G +++A + F T+R      ++  YN L+ G 
Sbjct: 745 YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 804

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            K   L     L+ ++ R  +  D +T++ +I  L   G  D
Sbjct: 805 SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 846



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 165/361 (45%), Gaps = 7/361 (1%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            M+A   F  +R +G  PN+ TYN L++G  +    +  L+L+  M    G F     P+ 
Sbjct: 776  MKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMR-EGIF-----PDK 829

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +T+ ++I GL K G  D   +L  KM  E    +  T+N LI+ +  +    +A  L   
Sbjct: 830  LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 889

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M   GV P+  ++N I N L K     E++ +L  M++ GV P    Y TL++G C  G 
Sbjct: 890  MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 949

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +  A +L   ME++G   +  + S ++ G     + E A+ +   ML   + P +  + T
Sbjct: 950  IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1009

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
            L        ++  A KL   M+  G+  D  AY   I G+C NG    A EL+  +R   
Sbjct: 1010 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1069

Query: 301  YELDIRAYNCLIDGLCKSGRLKIAWELFRSLP-RGVLIADVVTYNIMIHALCADGKMDKA 359
               +I  Y  L+D +  +  L    +L   L  RG++     T ++      A GK++  
Sbjct: 1070 LCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLISWGGSTQHLDKELTVAMGKLNYI 1129

Query: 360  R 360
            R
Sbjct: 1130 R 1130



 Score =  114 bits (286), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 2/257 (0%)

Query: 114 AKCLFIEMMDQGVQPNVVS--FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           +K +F  +MD     N +   F++++    K G +D A    EL+  +G +P+ +  N +
Sbjct: 145 SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMI 204

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +       R      LF  M   G   NV +++ILING C    ++ A +L  +M   G 
Sbjct: 205 LASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGF 264

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P +V YNTL     +  + + A +L D M   G+ AD   Y  FID LC N    +A  
Sbjct: 265 VPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYL 324

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L + +R      +   YN LI+G  K G++ +A ++F  + +  L  + VTYN +I   C
Sbjct: 325 LLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC 384

Query: 352 ADGKMDKARDLFLDMEA 368
             G  ++A  L   MEA
Sbjct: 385 HVGDFEEALRLLDHMEA 401


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 185/399 (46%), Gaps = 47/399 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---KP 58
           +A  +F ++      PN  TYNT+I+G  + G       L ++M         VC   KP
Sbjct: 218 DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM---------VCHGLKP 268

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N +TY  ++ GLC+ G + +   L  +M  + + P+  TY+ L  G     D      LF
Sbjct: 269 NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF 328

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            + +  GV     + ++++N LCK+GK+  A  +L+ ++  G+ P   +YNTL++G+C T
Sbjct: 329 GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 388

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A   F  M+S   K +  +Y+ LING CK + I  A  L  EM   G+ P V  +
Sbjct: 389 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 448

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE------- 291
           NTL        Q+E+ F +  EMQ +G+  +  +Y + ++  CKNG I EAV        
Sbjct: 449 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 508

Query: 292 ----------------------------LFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
                                       L   ++       I  YN LI GLC   ++  
Sbjct: 509 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 568

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           A E+  SL    LI D V+YN +I A C  G +DKA DL
Sbjct: 569 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 607



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF K    G     +T + L+NGLC+ G   +A  + + + N     G+V  P  V Y 
Sbjct: 326 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA----GLV--PTRVIYN 379

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G C+ G ++ A   F +MK  +I P+ +TYN+LI+G C A     A+ L +EM D 
Sbjct: 380 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 439

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P V +FN +++   + G++++   +L  M + G++PN   Y ++++ FC  G++  A
Sbjct: 440 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 499

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +   M       N   Y+ +I+ Y ++   + A  L  +M S GI P +V YN L  G
Sbjct: 500 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 559

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    Q+  A ++ + +  H +  D  +Y T I   C  G I +A++L + +     +  
Sbjct: 560 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 619

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +R Y+ LI GL  +GRL     L++ + +  ++     +NIM+ A    G   KA DL  
Sbjct: 620 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 679

Query: 365 DMEAK 369
           +M  K
Sbjct: 680 EMLQK 684



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E +AL  ++      P+ FTY+ L +GL R G +   L+LF +        G        
Sbjct: 288 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DY 341

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +++GLCK+G V  A+E+   + +  + P  V YN+LI+G+C   +   A   F +M
Sbjct: 342 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 401

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +++N ++N LCK  ++  A  LL  M   GV P    +NTL+D +  TG++
Sbjct: 402 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 461

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P+  +YN +
Sbjct: 462 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 521

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E    ++AF L ++M+ +G++     Y   I GLC    I EA E+  +L   + 
Sbjct: 522 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 581

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +YN LI   C  G +  A +L + + +  + + V TY+ +I  L   G++++   
Sbjct: 582 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 641

Query: 362 LFLDM 366
           L+  M
Sbjct: 642 LYQKM 646



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 151/312 (48%), Gaps = 5/312 (1%)

Query: 52  FGVVC----KPNTVTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFC 106
           FG++     +P+T  +   +      G + +A  +  +M +D    PN  +YN +I G  
Sbjct: 152 FGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMW 211

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
            A    +A  +F EM ++ V PN +++N +++   K G ++   RL + M+  G++PNA 
Sbjct: 212 RAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAI 271

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
            YN L+ G C  GR+     L   M S     + F+YSIL +G  +N + +  LSL+ + 
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           L  G+       + L  GL +  +V  A ++   +   G+      Y T I+G C+ G +
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             A   F  ++    + D   YN LI+GLCK+ R+  A +L   +    +   V T+N +
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451

Query: 347 IHALCADGKMDK 358
           I A    G+++K
Sbjct: 452 IDAYGRTGQLEK 463



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 6/294 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F +++    +P+  TYN LINGLC+      A +L  EM + NG       P   T
Sbjct: 394 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD-NG-----VNPTVET 447

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+ID   + G ++K   +  +M++  + PNVV+Y S+++ FC      EA  +  +M 
Sbjct: 448 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 507

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V PN   +N I++   ++G  D+A  L+E M   G+ P+   YN L+ G C   +++
Sbjct: 508 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 567

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEE+  S+ +     +  SY+ LI+  C    I+ AL L   M   GIK  V  Y+ L 
Sbjct: 568 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 627

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            GL    ++     L+ +M ++ V      +   ++   K G  ++A +L + +
Sbjct: 628 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K++  G  P++ TYN LI GLC       A  +   ++N          P+ V
Sbjct: 533 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR------LIPDAV 586

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I   C  G +DKA +L  +M    I   V TY+ LI G   A   NE + L+ +M
Sbjct: 587 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 646

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M   V P+    N+++    K G   +A  L + M+Q
Sbjct: 647 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 683



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 1/145 (0%)

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA-DTWAYRTFIDGLCKNG 284
           + S G +PD   +N           +  A  +   M R G    + ++Y   I G+ + G
Sbjct: 155 LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 214

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
              +AVE+F  +       +   YN +IDG  K G L+  + L   +    L  + +TYN
Sbjct: 215 RGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYN 274

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
           +++  LC  G+M +   L  +M ++
Sbjct: 275 VLLSGLCRAGRMGETSALLDEMASQ 299


>gi|357499031|ref|XP_003619804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494819|gb|AES76022.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 344

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 24/343 (6%)

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
           +G C+ G T  AL L   +       G + +PN + Y+TIIDG+CK   V+ A +L+ +M
Sbjct: 23  DGSCKVGQTRAALQLLRRVD------GKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEM 76

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
             + I+P+V+TY++LI GFC     N+   LF +M  + + P+V +FN+ ++  CK G++
Sbjct: 77  VAKRISPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRV 136

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA  +L +M++ G++P+   YNTLM+G+CL   +N A+++F +M   G           
Sbjct: 137 KEAKYVLSMMMKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVV--------- 187

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                  K I+ A++LY EM  +   PDVV Y++L   + +  Q          +   G+
Sbjct: 188 -------KMIDEAINLYEEMHCRKNIPDVVTYSSLVDIMHDRGQPPDIITYNSILD--GI 238

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D + Y  FI GLC++G + +A ++F  L +  Y LD+  Y  +I G C  G  K A  
Sbjct: 239 RPDMYTYTIFIKGLCQSGKLKDARKVFEDLLVKGYNLDVYTYTVMIQGFCDKGLFKEALA 298

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L   +     I D   Y I+I +L    + D A  L  +M A+
Sbjct: 299 LLSKMEDNGCIPDAKIYEIVILSLFEKDENDMAEKLLREMIAR 341



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 145/317 (45%), Gaps = 60/317 (18%)

Query: 4   AALFMKLRVFG--CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           AAL +  RV G   +PNV  Y+T+I+G+C+      A +L+ EM            P+ +
Sbjct: 33  AALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKR------ISPDVI 86

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I G C  G ++    LF KM  ENINP+V T+N  +  FC      EAK +   M
Sbjct: 87  TYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMM 146

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKM-------------------DEASRLLELM------ 156
           M  G++P+VV++N +MN  C   +M                   DEA  L E M      
Sbjct: 147 MKHGIKPSVVTYNTLMNGYCLVKEMNMAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNI 206

Query: 157 ---------------------------IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
                                      I  G+RP+ + Y   + G C +G++  A ++F 
Sbjct: 207 PDVVTYSSLVDIMHDRGQPPDIITYNSILDGIRPDMYTYTIFIKGLCQSGKLKDARKVFE 266

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            +   G   +V++Y+++I G+C     + AL+L S+M   G  PD  IY  + + LFE  
Sbjct: 267 DLLVKGYNLDVYTYTVMIQGFCDKGLFKEALALLSKMEDNGCIPDAKIYEIVILSLFEKD 326

Query: 250 QVERAFKLFDEMQRHGV 266
           + + A KL  EM   G+
Sbjct: 327 ENDMAEKLLREMIARGL 343


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/399 (30%), Positives = 185/399 (46%), Gaps = 47/399 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC---KP 58
           +A  +F ++      PN  TYNT+I+G  + G       L ++M         VC   KP
Sbjct: 33  DAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM---------VCHGLKP 83

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N +TY  ++ GLC+ G + +   L  +M  + + P+  TY+ L  G     D      LF
Sbjct: 84  NAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLF 143

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            + +  GV     + ++++N LCK+GK+  A  +L+ ++  G+ P   +YNTL++G+C T
Sbjct: 144 GKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQT 203

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G +  A   F  M+S   K +  +Y+ LING CK + I  A  L  EM   G+ P V  +
Sbjct: 204 GELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETF 263

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE------- 291
           NTL        Q+E+ F +  EMQ +G+  +  +Y + ++  CKNG I EAV        
Sbjct: 264 NTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFH 323

Query: 292 ----------------------------LFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
                                       L   ++       I  YN LI GLC   ++  
Sbjct: 324 KDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISE 383

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           A E+  SL    LI D V+YN +I A C  G +DKA DL
Sbjct: 384 AEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDL 422



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +LF K    G     +T + L+NGLC+ G   +A  + + + N     G+V  P  V Y 
Sbjct: 141 SLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNA----GLV--PTRVIYN 194

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G C+ G ++ A   F +MK  +I P+ +TYN+LI+G C A     A+ L +EM D 
Sbjct: 195 TLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDN 254

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV P V +FN +++   + G++++   +L  M + G++PN   Y ++++ FC  G++  A
Sbjct: 255 GVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEA 314

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +   M       N   Y+ +I+ Y ++   + A  L  +M S GI P +V YN L  G
Sbjct: 315 VAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKG 374

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    Q+  A ++ + +  H +  D  +Y T I   C  G I +A++L + +     +  
Sbjct: 375 LCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKST 434

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +R Y+ LI GL  +GRL     L++ + +  ++     +NIM+ A    G   KA DL  
Sbjct: 435 VRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRK 494

Query: 365 DMEAK 369
           +M  K
Sbjct: 495 EMLQK 499



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E +AL  ++      P+ FTY+ L +GL R G +   L+LF +        G        
Sbjct: 103 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIG------DY 156

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +++GLCK+G V  A+E+   + +  + P  V YN+LI+G+C   +   A   F +M
Sbjct: 157 TCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQM 216

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +++N ++N LCK  ++  A  LL  M   GV P    +NTL+D +  TG++
Sbjct: 217 KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQL 276

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P+  +YN +
Sbjct: 277 EKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAI 336

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E    ++AF L ++M+ +G++     Y   I GLC    I EA E+  +L   + 
Sbjct: 337 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRL 396

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  +YN LI   C  G +  A +L + + +  + + V TY+ +I  L   G++++   
Sbjct: 397 IPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEY 456

Query: 362 LFLDM 366
           L+  M
Sbjct: 457 LYQKM 461



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 145/294 (49%), Gaps = 6/294 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F +++    +P+  TYN LINGLC+      A +L  EM + NG       P   T
Sbjct: 209 AFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQD-NG-----VNPTVET 262

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+ID   + G ++K   +  +M++  + PNVV+Y S+++ FC      EA  +  +M 
Sbjct: 263 FNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMF 322

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V PN   +N I++   ++G  D+A  L+E M   G+ P+   YN L+ G C   +++
Sbjct: 323 HKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQIS 382

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEE+  S+ +     +  SY+ LI+  C    I+ AL L   M   GIK  V  Y+ L 
Sbjct: 383 EAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLI 442

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            GL    ++     L+ +M ++ V      +   ++   K G  ++A +L + +
Sbjct: 443 SGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 496



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 134/272 (49%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           +D    PN  +YN +I G   A    +A  +F EM ++ V PN +++N +++   K G +
Sbjct: 7   RDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDL 66

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           +   RL + M+  G++PNA  YN L+ G C  GR+     L   M S     + F+YSIL
Sbjct: 67  EAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSIL 126

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            +G  +N + +  LSL+ + L  G+       + L  GL +  +V  A ++   +   G+
Sbjct: 127 FDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGL 186

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                 Y T I+G C+ G +  A   F  ++    + D   YN LI+GLCK+ R+  A +
Sbjct: 187 VPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQD 246

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           L   +    +   V T+N +I A    G+++K
Sbjct: 247 LLMEMQDNGVNPTVETFNTLIDAYGRTGQLEK 278



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 123/245 (50%)

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D    PN  S+NV++  + + G+  +A  + + M +  V PN   YNT++DG    G + 
Sbjct: 8   DGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLE 67

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
               L   M   G K N  +Y++L++G C+   +    +L  EM S+ + PD   Y+ LF
Sbjct: 68  AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 127

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL      +    LF +  ++GV    +     ++GLCK+G +  A E+ ++L      
Sbjct: 128 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 187

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
                YN LI+G C++G L+ A+  F  +    +  D +TYN +I+ LC   ++  A+DL
Sbjct: 188 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDL 247

Query: 363 FLDME 367
            ++M+
Sbjct: 248 LMEMQ 252



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/157 (31%), Positives = 74/157 (47%), Gaps = 6/157 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K++  G  P++ TYN LI GLC       A  +   ++N          P+ V
Sbjct: 348 QAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHR------LIPDAV 401

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I   C  G +DKA +L  +M    I   V TY+ LI G   A   NE + L+ +M
Sbjct: 402 SYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKM 461

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M   V P+    N+++    K G   +A  L + M+Q
Sbjct: 462 MQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQ 498



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 1/114 (0%)

Query: 257 LFDEMQRHGVAA-DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +   M R G    + ++Y   I G+ + G   +AVE+F  +       +   YN +IDG 
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K G L+  + L   +    L  + +TYN+++  LC  G+M +   L  +M ++
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 114


>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 804

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 202/441 (45%), Gaps = 89/441 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNT-----------------------------------LI 26
           +A   F  ++ F C+P+VFTYNT                                   LI
Sbjct: 144 KAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILI 203

Query: 27  NGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKM 86
           +G+C++G T  AL +F+EM            PN +TYT II GLC+    D A  LF+ M
Sbjct: 204 DGMCKSGKTQNALQMFDEMTQRR------ILPNKITYTIIISGLCQAQKADVAYRLFIAM 257

Query: 87  KDENINPNVVTYNSLIHGFC-----------------------------------YANDW 111
           KD    P+ VTYN+L+HGFC                                    A  +
Sbjct: 258 KDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRF 317

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            +A+  + +M +  ++P+V+ + ++M  L K GK  +A RLL  M + G+ P+   YN L
Sbjct: 318 EDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNAL 377

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           + G+C  G ++ A+ L + +    C  +  +Y+ILI G C++  +  A  +++EM   G 
Sbjct: 378 IKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGC 437

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEM-------------QRHGVAADTWAYRTFID 278
            P VV +N L  G  +   +E+A  LF +M             Q      DT + +T ++
Sbjct: 438 YPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVE 497

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            LC +G I++A  +   L    +  +I  YN LI G CK+G +  A++LF+ L    L  
Sbjct: 498 QLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSP 557

Query: 339 DVVTYNIMIHALCADGKMDKA 359
           D VTY  +I+ L +  + + A
Sbjct: 558 DSVTYGTLINGLLSANREEDA 578



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/357 (31%), Positives = 173/357 (48%), Gaps = 12/357 (3%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F    + FT   LI    +      A+  FE M + +      CKP+  TY T++  + +
Sbjct: 122 FSISADAFT--VLIQAYAKMDMIEKAVESFEMMKDFD------CKPDVFTYNTVLHVMVR 173

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           +  V  A  ++ +M   N  PN+ T++ LI G C +     A  +F EM  + + PN ++
Sbjct: 174 KEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKIT 233

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           + +I++ LC+  K D A RL   M   G  P++  YN L+ GFC  GRV+ A  L    E
Sbjct: 234 YTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFE 293

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 +   YS LI+G  + +  E A   Y +M    IKPDV++Y  +  GL +  + +
Sbjct: 294 KDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFK 353

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA--YNC 310
            A +L +EM   G+  DT  Y   I G C  G + EA  L   L I K +    A  Y  
Sbjct: 354 DALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLH--LEISKNDCFSSACTYTI 411

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LI G+C+SG +  A ++F  + +      VVT+N +I   C  G ++KA+ LF  ME
Sbjct: 412 LICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKME 468



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 190/445 (42%), Gaps = 89/445 (20%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ ++    C PN+ T++ LI+G+C++G T  AL +F+EM            PN +T
Sbjct: 180 ALGIYNRMLKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRR------ILPNKIT 233

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC---------------- 106
           YT II GLC+    D A  LF+ MKD    P+ VTYN+L+HGFC                
Sbjct: 234 YTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFE 293

Query: 107 -------------------YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                               A  + +A+  + +M +  ++P+V+ + ++M  L K GK  
Sbjct: 294 KDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFK 353

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A RLL  M + G+ P+   YN L+ G+C  G ++ A+ L + +    C  +  +Y+ILI
Sbjct: 354 DALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILI 413

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ----- 262
            G C++  +  A  +++EM   G  P VV +N L  G  +   +E+A  LF +M+     
Sbjct: 414 CGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNP 473

Query: 263 -------------------------------------------RHGVAADTWAYRTFIDG 279
                                                        G A +   Y   I G
Sbjct: 474 SLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHG 533

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            CK G I  A +LF+ L++     D   Y  LI+GL  + R + A+ +   + +      
Sbjct: 534 FCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPI 593

Query: 340 VVTYNIMIHALCADGKMDKARDLFL 364
              Y   +   C   K+  A  L+L
Sbjct: 594 TEVYKSFMTWSCRRNKITLAFSLWL 618



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 197/411 (47%), Gaps = 55/411 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   + K+     +P+V  Y  ++ GL + G    AL L  EM     E G+V  P+T 
Sbjct: 319 DAQVWYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMT----ERGLV--PDTH 372

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C  G +D+AK L L++   +   +  TY  LI G C +    +A+ +F EM
Sbjct: 373 CYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEM 432

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV-------------- 167
              G  P+VV+FN +++  CK G +++A +LL   ++IG  P+ F+              
Sbjct: 433 EKHGCYPSVVTFNALIDGFCKAGNIEKA-QLLFYKMEIGRNPSLFLRLSQGANRVLDTAS 491

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
             T+++  C +G + +A  + + +   G   N+ +Y+ILI+G+CK   I GA  L+ E+ 
Sbjct: 492 LQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQ 551

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            KG+ PD V Y TL  GL   ++ E AF + D++ ++G    T  Y++F+   C+   I 
Sbjct: 552 LKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKIT 611

Query: 288 EAVELF---------RTLRILK------------------YELDIR-------AYNCLID 313
            A  L+         R   +LK                   E+D +        Y   + 
Sbjct: 612 LAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQLAPYTIWLI 671

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           GLC++GRL+ A ++F +L    ++    +   +I+ L   G +D A ++FL
Sbjct: 672 GLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFL 722



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 156/325 (48%), Gaps = 10/325 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-------GV 54
           +A  +F ++   GC P+V T+N LI+G C+ G+   A  LF +M  G           G 
Sbjct: 424 DAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGA 483

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
               +T +  T+++ LC  G + KA  + +++ D    PN++TYN LIHGFC A + N A
Sbjct: 484 NRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGA 543

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             LF E+  +G+ P+ V++  ++N L    + ++A  +L+ +++ G  P   VY + M  
Sbjct: 544 FKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTW 603

Query: 175 FCLTGRVNRAEELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            C   ++  A  L++  + S+  + +    S+  N   +  E+E A+    EM  K    
Sbjct: 604 SCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEEN--FEKGEVEEAVRGLLEMDFKLNDF 661

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            +  Y    IGL +  ++E A K+F  ++ H V     +    I  L K G +  A E+F
Sbjct: 662 QLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIF 721

Query: 294 RTLRILKYELDIRAYNCLIDGLCKS 318
                  Y L  R  N L+  L +S
Sbjct: 722 LYTIDKGYMLMPRICNRLLKSLLRS 746



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 144/307 (46%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V++  IID L K+   +   ++  ++K    + +   +  LI  +   +   +A   F  
Sbjct: 92  VSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVESFEM 151

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D   +P+V ++N +++ + +   +  A  +   M+++   PN   ++ L+DG C +G+
Sbjct: 152 MKDFDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLNCLPNIATFSILIDGMCKSGK 211

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A ++F  M       N  +Y+I+I+G C+ ++ + A  L+  M   G  PD V YN 
Sbjct: 212 TQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNA 271

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++ +V+ A  L    ++     D   Y   IDGL +     +A   +R +    
Sbjct: 272 LLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHN 331

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D+  Y  ++ GL K+G+ K A  L   +    L+ D   YN +I   C  G +D+A+
Sbjct: 332 IKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAK 391

Query: 361 DLFLDME 367
            L L++ 
Sbjct: 392 SLHLEIS 398



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 26/285 (9%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  + M+L   G  PN+ TYN LI+G C+ G+   A  LF+E+            P++
Sbjct: 506 LKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKG------LSPDS 559

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+I+GL      + A  +  ++      P    Y S +   C  N    A  L+++
Sbjct: 560 VTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLK 619

Query: 121 MMDQ--GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF---VYNTLMDGF 175
            +    G    V+     + E  + G+++EA R L   +++  + N F    Y   + G 
Sbjct: 620 YLRSIPGRDSEVLK---SVEENFEKGEVEEAVRGL---LEMDFKLNDFQLAPYTIWLIGL 673

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVF----SYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           C  GR+  A ++F ++E    +HNV     S   LI    K   ++ A  ++   + KG 
Sbjct: 674 CQAGRLEEALKIFFTLE----EHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGY 729

Query: 232 KPDVVIYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRT 275
                I N L   L     +  RAF L   M+  G   D+  ++T
Sbjct: 730 MLMPRICNRLLKSLLRSEDKRNRAFDLLSRMKSLGYDLDSHLHQT 774


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/370 (32%), Positives = 187/370 (50%), Gaps = 23/370 (6%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V T+N LI  LC+      A+ + EEM++    +G+V  P+  T+TT++ G  +E
Sbjct: 188 GIKPDVSTFNILIKALCKAHQIRPAILVMEEMSS----YGLV--PDEKTFTTLMQGFIEE 241

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC----------------L 117
           G +D A  +  +M D       VT N L+HGFC      EA                  L
Sbjct: 242 GNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIEL 301

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           + EM ++G QP+  ++N++++ LC  GK+ EA  LL  M   G   N   YNTL+DGFC 
Sbjct: 302 YNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCK 361

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             ++  AEE+F  ME  G   N  +Y+ LI+G CK++ ++ A  L  +M+ +G+KPD   
Sbjct: 362 NKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFT 421

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN++         +++A  +   M  +G   D   Y T I GLCK G +  A  L R+++
Sbjct: 422 YNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQ 481

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKM 356
           +    L   AYN +I  L K  R K A  LFR +       D  TY I+   L  + G +
Sbjct: 482 LKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPI 541

Query: 357 DKARDLFLDM 366
            +A D  ++M
Sbjct: 542 GEAVDFVIEM 551



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 165/314 (52%), Gaps = 11/314 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----------CKPNTVTY 63
           GC     T N L++G C+ G    AL+  +EM+N       +          C+P+  TY
Sbjct: 258 GCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTY 317

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
             +ID LC  G + +A  L  +M+      NV+TYN+LI GFC      EA+ +F +M  
Sbjct: 318 NMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEI 377

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           QG+  N V++N +++ LCK+ ++ EA++L++ MI  G++P+ F YN+++  FC  G + +
Sbjct: 378 QGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQK 437

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A ++  +M S GC+ ++ +Y  LI G CK   +E A  L   +  KG+      YN +  
Sbjct: 438 AADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQ 497

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-GYIVEAVELFRTLRILKYE 302
            LF+  + + A +LF EM+  G   D + Y+    GL  + G I EAV+    +    + 
Sbjct: 498 ALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFL 557

Query: 303 LDIRAYNCLIDGLC 316
            +  ++  L +GLC
Sbjct: 558 PEFSSFYMLAEGLC 571



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 144/280 (51%), Gaps = 7/280 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ +++  GC+P+ FTYN LI+ LC  G    AL L  EM          C  N +T
Sbjct: 298 AIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISG------CARNVIT 351

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+IDG CK   +++A+E+F +M+ + ++ N VTYN+LI G C +    EA  L  +M+
Sbjct: 352 YNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMI 411

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P+  ++N ++   C+ G + +A+ +++ M   G  P+   Y TL+ G C  GRV 
Sbjct: 412 MEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVE 471

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L  S++  G      +Y+ +I    K K  + A+ L+ EM  KG  PD   Y  +F
Sbjct: 472 VASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVF 531

Query: 243 IGLFEI-HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            GL      +  A     EM   G   +  ++    +GLC
Sbjct: 532 RGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 178/401 (44%), Gaps = 57/401 (14%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FT   L++ L R      AL L    A+    F    +PN+  Y  I+  L K G  +  
Sbjct: 52  FTPAQLLDTLRRQNDETAALRLLS-WASKQPNF----RPNSSIYEEILRKLGKVGSFNSM 106

Query: 80  KELFLKMK--DENINPNVVT----------------------------------YNSLIH 103
           K++  +MK  D  I+  V+                                   YN L++
Sbjct: 107 KDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNFLLN 166

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
                N     + +   M+ +G++P+V +FN+++  LCK  ++  A  ++E M   G+ P
Sbjct: 167 VLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVP 226

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS-- 221
           +   + TLM GF   G ++ A  +   M   GC     + ++L++G+CK   IE ALS  
Sbjct: 227 DEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFI 286

Query: 222 --------------LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
                         LY+EM +KG +PD   YN L   L    +++ A  L  EM+  G A
Sbjct: 287 DEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCA 346

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +   Y T IDG CKN  I EA E+F  + I     +   YN LIDGLCKS R++ A +L
Sbjct: 347 RNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQL 406

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              +    L  D  TYN M+   C +G + KA D+   M +
Sbjct: 407 MDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTS 447



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 129/259 (49%), Gaps = 7/259 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++ + GC  NV TYNTLI+G C+      A  +F++M     E   + + N+V
Sbjct: 332 EALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQM-----EIQGLSR-NSV 385

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDGLCK   V +A +L  +M  E + P+  TYNS++  FC   D  +A  +   M
Sbjct: 386 TYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTM 445

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++V++  ++  LCK G+++ ASRLL  +   G+      YN ++       R 
Sbjct: 446 TSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRT 505

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKN-KEIEGALSLYSEMLSKGIKPDVVIYNT 240
             A  LF  ME  G   + F+Y I+  G   +   I  A+    EM+ KG  P+   +  
Sbjct: 506 KEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYM 565

Query: 241 LFIGLFEIHQVERAFKLFD 259
           L  GL  +   +   KL D
Sbjct: 566 LAEGLCSLSMEDTLIKLVD 584



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 7/158 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA +   +   GCEP++ TY TLI GLC+ G   VA  L   +       G+V  P+  
Sbjct: 437 KAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLK----GMVLTPHA- 491

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIE 120
            Y  +I  L K     +A  LF +M+++   P+  TY  +  G   +     EA    IE
Sbjct: 492 -YNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIE 550

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M+++G  P   SF ++   LC     D   +L++L+++
Sbjct: 551 MIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVME 588


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 195/364 (53%), Gaps = 6/364 (1%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A   F  + + G +P+V+T N ++  + +   T +  +LF EM++       +C PN  T
Sbjct: 933  AVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG-----IC-PNVGT 986

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +  +I+GLC EG + KA  L  +M++    P +VTYN+L++ +C    +  A  L   M+
Sbjct: 987  FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 1046

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             +G++ +V ++NV ++ LC N +  +A  LL+ M +  + PN   YNTL++GF   G++ 
Sbjct: 1047 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 1106

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A ++F  M       N  +Y+ LI G+C   + E AL L   M + G++ + V Y TL 
Sbjct: 1107 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 1166

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             GL +  + E A +L + M+ + +     AY   IDGLCKNG + EAV+L   +      
Sbjct: 1167 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 1226

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             D+  Y+ LI+G C+ G +K A E+   + R  L+ + + Y+ +I+  C  G + +A  +
Sbjct: 1227 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 1286

Query: 363  FLDM 366
            +  M
Sbjct: 1287 YAVM 1290



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 179/368 (48%), Gaps = 12/368 (3%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK---P 58
            +A  L  ++   G  P + TYNTL+N  C+ G    A+ L + M         +CK    
Sbjct: 1002 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYM---------ICKGIEA 1052

Query: 59   NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            +  TY   ID LC      KA  L  KM+ E I+PN VTYN+LI+GF        A  +F
Sbjct: 1053 DVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVF 1112

Query: 119  IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             EM    + PN V++N ++   C  G  +EA RLL+ M   G+R N   Y TL++G C  
Sbjct: 1113 NEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKH 1172

Query: 179  GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
             +   A+ L   M          +Y++LI+G CKN  ++ A+ L   M   G+ PDV+ Y
Sbjct: 1173 EKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITY 1232

Query: 239  NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            ++L  G   +  ++ A ++   M R G+  +   Y T I   C++G + EA++++  +  
Sbjct: 1233 SSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNC 1292

Query: 299  LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              +  D    N L+  LC+ G+L  A +    + R  L+ + +TY+ +I+   + G    
Sbjct: 1293 NGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLN 1352

Query: 359  ARDLFLDM 366
            A   F DM
Sbjct: 1353 AFSFFDDM 1360



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/361 (30%), Positives = 175/361 (48%), Gaps = 6/361 (1%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            AA +F ++  F   PN  TYN LI G C  G    AL L + M           + N VT
Sbjct: 1108 AAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAG------LRLNEVT 1161

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            Y T+++GLCK    + AK L  +M+  ++    + Y  LI G C     +EA  L   M 
Sbjct: 1162 YGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMY 1221

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              GV P+V++++ ++N  C+ G +  A  ++  M + G+  N  +Y+TL+  FC  G V 
Sbjct: 1222 KDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVT 1281

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A +++  M   G   + F+ ++L++  C++ ++  A      M   G+ P+ + Y+ + 
Sbjct: 1282 EAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCII 1341

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             G   I     AF  FD+M + G     + Y + + GLCK G +VEA +    L  +   
Sbjct: 1342 NGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGA 1401

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +D   YN L+   CKSG L  A  LF  + +  ++ D  TY+ ++  LC  GK   A  L
Sbjct: 1402 VDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCL 1461

Query: 363  F 363
            F
Sbjct: 1462 F 1462



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 194/438 (44%), Gaps = 75/438 (17%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA ALF K+      P+ +TY++L+ GLCR G  + A+ LF   A G G       PN V
Sbjct: 1422 EAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT-AMGRGTLF----PNHV 1476

Query: 62   TYTTIIDGLCKEG--------------------------FVD---------KAKELFLKM 86
             YT ++DGL K G                           +D         KA + F  M
Sbjct: 1477 MYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTM 1536

Query: 87   KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
            +   + PN+ TYN L+HGF           L+  MM +G+ P+ ++F+ ++  L K+G  
Sbjct: 1537 RWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIP 1596

Query: 147  DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            D   +LL  MI  G   + F +N L++ +  +G++ +A +L   M ++G   +  +Y+ +
Sbjct: 1597 DLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHI 1656

Query: 207  INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
             NG  K      +  +  EML  G+ P    Y TL  G+  +  ++ AFKL DEM+  G 
Sbjct: 1657 FNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGF 1716

Query: 267  AADTWAYRTFIDGL-----------------------------------CKNGYIVEAVE 291
             +   A    + GL                                   C++  I EA++
Sbjct: 1717 GSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALK 1776

Query: 292  LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            L   + +   +LD+ AYN LI G+C +G    A+EL+  +    L  ++ TY +++ A+ 
Sbjct: 1777 LKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAIS 1836

Query: 352  ADGKMDKARDLFLDMEAK 369
            A   + +   L  D++ +
Sbjct: 1837 AANNLIQGEKLLTDLQER 1854



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/369 (27%), Positives = 178/369 (48%), Gaps = 7/369 (1%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            + A + F  +   G  P+ FTY +L+ GLC+ G+ + A      +    G        ++
Sbjct: 1351 LNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV------DS 1404

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            V Y T++   CK G + +A  LF KM   N+ P+  TY+SL+ G C       A CLF  
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464

Query: 121  MMDQGVQ-PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
             M +G   PN V +  +++ L K G    A    E M++ G  P+   +N ++D     G
Sbjct: 1465 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 1524

Query: 180  RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            ++ +A + F +M   G   N+ +Y+IL++G+ K + +   LSLYS M+ +GI PD + ++
Sbjct: 1525 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 1584

Query: 240  TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +L +GL +    +   KL  +M   G  AD + +   I+   ++G + +A +L   +  L
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 1644

Query: 300  KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                D   YN + +GL K    + +  +   +    +I     Y  +I+ +C  G +  A
Sbjct: 1645 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGA 1704

Query: 360  RDLFLDMEA 368
              L  +MEA
Sbjct: 1705 FKLKDEMEA 1713



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 172/389 (44%), Gaps = 52/389 (13%)

Query: 30   CRTGHTIVALNLFE----------EMANGNGE-FGVV------CKPNTVTYTTIIDGLCK 72
            C T H +V   +++          +M  G+   FG +      C      +  +I    K
Sbjct: 867  CLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDLLIRVYLK 926

Query: 73   EGFVDKAKE-----------------------------------LFLKMKDENINPNVVT 97
            EG +D A E                                   LF +M D+ I PNV T
Sbjct: 927  EGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGT 986

Query: 98   YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            +N LI+G C   +  +A  L  +M + G  P +V++N ++N  CK G+   A  L++ MI
Sbjct: 987  FNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMI 1046

Query: 158  QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              G+  +   YN  +D  C   R  +A  L   M       N  +Y+ LING+ K  +I 
Sbjct: 1047 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIG 1106

Query: 218  GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             A  +++EM    + P+ V YN L  G   +   E A +L D M+  G+  +   Y T +
Sbjct: 1107 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 1166

Query: 278  DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            +GLCK+     A  L   +R+    +   AY  LIDGLCK+G L  A +L  ++ +  + 
Sbjct: 1167 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 1226

Query: 338  ADVVTYNIMIHALCADGKMDKARDLFLDM 366
             DV+TY+ +I+  C  G +  A+++   M
Sbjct: 1227 PDVITYSSLINGFCRVGNIKSAKEIICRM 1255



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 165/342 (48%), Gaps = 9/342 (2%)

Query: 18   NVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
            N   Y+TLI   C+ G+   A+ ++  M  NG+G     C         ++  LC++G +
Sbjct: 1263 NKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTC-------NVLVSSLCRDGKL 1315

Query: 77   DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             +A++    M    + PN +TY+ +I+G+    D   A   F +M+  G  P+  ++  +
Sbjct: 1316 GEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSL 1375

Query: 137  MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
            +  LCK G + EA + L  +  I    ++ +YNTL+   C +G ++ A  LF  M     
Sbjct: 1376 LKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNV 1435

Query: 197  KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQVERAF 255
              + ++YS L+ G C+  +   A+ L+   + +G + P+ V+Y  L  GL +    + AF
Sbjct: 1436 LPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAF 1495

Query: 256  KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
              F+EM + G   DT A+   ID   + G +++A + F T+R      ++  YN L+ G 
Sbjct: 1496 YFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGF 1555

Query: 316  CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             K   L     L+ ++ R  +  D +T++ +I  L   G  D
Sbjct: 1556 SKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 1597



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 2/257 (0%)

Query: 114  AKCLFIEMMDQGVQPNVVS--FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            +K +F  +MD     N +   F++++    K G +D A    EL+  +G +P+ +  N +
Sbjct: 896  SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMI 955

Query: 172  MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
            +       R      LF  M   G   NV +++ILING C    ++ A +L  +M   G 
Sbjct: 956  LASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGF 1015

Query: 232  KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             P +V YNTL     +  + + A +L D M   G+ AD   Y  FID LC N    +A  
Sbjct: 1016 VPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYL 1075

Query: 292  LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            L + +R      +   YN LI+G  K G++ +A ++F  + +  L  + VTYN +I   C
Sbjct: 1076 LLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHC 1135

Query: 352  ADGKMDKARDLFLDMEA 368
              G  ++A  L   MEA
Sbjct: 1136 HVGDFEEALRLLDHMEA 1152


>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
          Length = 332

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 174/328 (53%), Gaps = 6/328 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V +Y+T+ING  + G      + + EM +          PN VTY +II  LCK  
Sbjct: 8   CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKR------ISPNVVTYNSIIAALCKAQ 61

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VDKA E+   M    + P+ +TYNS++HGFC +    EA     +M   GV+P+VV++N
Sbjct: 62  TVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYN 121

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            +M+ LCKNG+  EA ++ + M + G++P+   Y TL+ G+   G +     L   M   
Sbjct: 122 SLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRN 181

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   N + +SIL+  Y K +++E A+ ++S+M  +G+ P+ V Y T+   L +  +VE A
Sbjct: 182 GIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDA 241

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
              F++M   G+  D+  Y + I  LC      +A ELF  +      L    +N +ID 
Sbjct: 242 MLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDS 301

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVT 342
            CK GR+  + +LF  + R  +  D++T
Sbjct: 302 HCKEGRVIESVKLFDLMVRIGVKPDIIT 329



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/320 (32%), Positives = 172/320 (53%), Gaps = 6/320 (1%)

Query: 45  MANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           MA+  G+    C P+ V+Y+T+I+G  KEG +DK    + +M D+ I+PNVVTYNS+I  
Sbjct: 1   MADDGGD----CPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAA 56

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C A   ++A  +   M+  GV P+ +++N I++  C +G+  EA   L+ M   GV P+
Sbjct: 57  LCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPD 116

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN+LMD  C  GR   A ++F SM   G K ++ +Y  L+ GY     +     L  
Sbjct: 117 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 176

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            M+  GI P+  +++ L     +  +VE A  +F +M++ G+  +   Y T ID LCK+G
Sbjct: 177 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 236

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTY 343
            + +A+  F  +       D   YN LI  LC   + + A ELF   L RG+ ++ +  +
Sbjct: 237 RVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIF-F 295

Query: 344 NIMIHALCADGKMDKARDLF 363
           N +I + C +G++ ++  LF
Sbjct: 296 NSIIDSHCKEGRVIESVKLF 315



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 148/274 (54%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+VV+Y+++I+GF    D ++    + EM+D+ + PNVV++N I+  LCK   +D+A  +
Sbjct: 10  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M++ GV P+   YN+++ GFC +G+   A      M S G + +V +Y+ L++  CK
Sbjct: 70  LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           N     A  ++  M  +G+KPD+  Y TL  G      +     L D M R+G+  + + 
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           +   +    K   + EA+ +F  +R      +   Y  +ID LCKSGR++ A   F  + 
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMI 249

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              L  D + YN +IH+LC   K +KA +LFL+M
Sbjct: 250 DEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEM 283



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 128/236 (54%), Gaps = 8/236 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     K+R  G EP+V TYN+L++ LC+ G    A  +F+ M           KP+  
Sbjct: 100 EAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRG------LKPDIT 153

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++ G   +G + +   L   M    I+PN   ++ L+  +       EA  +F +M
Sbjct: 154 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 213

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PN V++  +++ LCK+G++++A    E MI  G+RP++ VYN+L+   C+  + 
Sbjct: 214 RQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKW 273

Query: 182 NRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            +AEELF+ M   G C   +F  SI I+ +CK   +  ++ L+  M+  G+KPD++
Sbjct: 274 EKAEELFLEMLDRGICLSTIFFNSI-IDSHCKEGRVIESVKLFDLMVRIGVKPDII 328



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 130/256 (50%), Gaps = 6/256 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TYN++++G C +G    A+   ++M +   E      P+ VTY +++D LCK 
Sbjct: 77  GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVE------PDVVTYNSLMDYLCKN 130

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A+++F  M    + P++ TY +L+ G+       E   L   M+  G+ PN   F
Sbjct: 131 GRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 190

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++++    K  K++EA  +   M Q G+ PNA  Y T++D  C +GRV  A   F  M  
Sbjct: 191 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 250

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + +   Y+ LI+  C   + E A  L+ EML +GI    + +N++     +  +V  
Sbjct: 251 EGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIE 310

Query: 254 AFKLFDEMQRHGVAAD 269
           + KLFD M R GV  D
Sbjct: 311 SVKLFDLMVRIGVKPD 326



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 6/132 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+R  G  PN  TY T+I+ LC++G    A+  FE+M +         +P+++
Sbjct: 205 EAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG------LRPDSI 258

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y ++I  LC     +KA+ELFL+M D  I  + + +NS+I   C      E+  LF  M
Sbjct: 259 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLM 318

Query: 122 MDQGVQPNVVSF 133
           +  GV+P++++ 
Sbjct: 319 VRIGVKPDIITL 330


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  192 bits (488), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/365 (30%), Positives = 183/365 (50%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +   GC P+V TYN L+   C+      A+ L + M          C P  V
Sbjct: 170 DALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEG------CTPTNV 223

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I+DG+C+EG VD A+EL   +      PN V YN+++ G   A  W + + L  EM
Sbjct: 224 TYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEM 283

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+  + +V+++ LC+ G    A RLLE M +     N   YN ++ G C  G V
Sbjct: 284 FSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHV 343

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L  +M++ GCK N+F+Y+IL+ G C  +  E A  L ++M      PD++ +NT+
Sbjct: 344 DGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTI 403

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +     +A ++F +M   G   ++  Y + I+GL K G + +++EL   +    +
Sbjct: 404 IGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGF 463

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  Y+ L + L +  +L  A ++   L    +    V YN ++  LC +GK D+A D
Sbjct: 464 NPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAID 522

Query: 362 LFLDM 366
           +  +M
Sbjct: 523 ILSNM 527



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 169/355 (47%), Gaps = 12/355 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V   N L+  LCR G    A  + E   +             VTY+ + DG C+ G
Sbjct: 84  CPPDVALANRLVRDLCRRGRPADAARVVEACGSA---------ATAVTYSALADGYCRVG 134

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+A+ +   M    + P+   YN L+H  C      +A  L   M+ +G  P+VV++N
Sbjct: 135 RLDEARRVVDGMP---VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYN 191

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           +++   CK     +A  L++LM   G  P    YN +MDG C  G V+ A EL  S+ S 
Sbjct: 192 ILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSY 251

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  N  +Y+ ++ G       E    L +EM S+   P     + +   L +    +RA
Sbjct: 252 GCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRA 311

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L ++M +H   A+   Y   + GLC+ G++  A+ L   ++    + +I  YN L+ G
Sbjct: 312 IRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKG 371

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LC + R + A +L   + +   + D++T+N +I  LC  G   +A ++F  M  K
Sbjct: 372 LCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEK 426



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/328 (29%), Positives = 143/328 (43%), Gaps = 40/328 (12%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L   L  +GC PN   YNT++ GL   G       L  EM      F   C P+  T
Sbjct: 241 ARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEM------FSENCPPSEAT 294

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            + +I  LC+EG   +A  L  KM   +   N+VTYN+++ G C     + A  L   M 
Sbjct: 295 LSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQ 354

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +PN+ ++N+++  LC   + ++A  L+  M Q    P+   +NT++   C  G   
Sbjct: 355 TDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTM 414

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG------------ 230
           +A E+F  M   GC  N  +YS +I G  K  ++E +L L +EM SKG            
Sbjct: 415 QAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYHLLAE 474

Query: 231 ----------------------IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
                                 I P  V+YNT+ +GL    + ++A  +   M   G   
Sbjct: 475 CLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMP 534

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           D   Y   I GL   GY+ EA EL  TL
Sbjct: 535 DESTYSILIQGLAHEGYMKEARELLSTL 562



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 132/289 (45%), Gaps = 40/289 (13%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+  T + +I+ LC+ G    A+ L E+M+  +      C  N VTY  ++ GLC++G
Sbjct: 288 CPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHD------CTANIVTYNAVVSGLCEQG 341

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD A  L   M+ +   PN+ TYN L+ G C A  W +A+ L  +M      P++++FN
Sbjct: 342 HVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFN 401

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES- 193
            I+  LC+ G   +A  + + M + G  PN+  Y+++++G   TG++ ++ EL   M S 
Sbjct: 402 TIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSK 461

Query: 194 ---------------------------------MGCKHNVFSYSILINGYCKNKEIEGAL 220
                                             G       Y+ ++ G C+N + + A+
Sbjct: 462 GFNPEINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAI 521

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            + S M+S G  PD   Y+ L  GL     ++ A +L   +    V  D
Sbjct: 522 DILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVD 570



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 130/244 (53%), Gaps = 7/244 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L   ++  GC+PN+FTYN L+ GLC       A +L  +M+  +      C P+ +T+ T
Sbjct: 349 LLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTD------CLPDILTFNT 402

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           II  LC++G   +A E+F +M ++   PN VTY+S+I G        ++  L  EM  +G
Sbjct: 403 IIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKG 462

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P + +++++   L +  K+ EA +++  +   G+ P A +YNT++ G C  G+ ++A 
Sbjct: 463 FNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAI 521

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++  +M S GC  +  +YSILI G      ++ A  L S + S+ +  D +I N   +  
Sbjct: 522 DILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKNDASLLD 581

Query: 246 FEIH 249
             IH
Sbjct: 582 QSIH 585



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 80/156 (51%), Gaps = 7/156 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  +F ++   GC PN  TY+++I GL +TG    +L L  EM  G+  F        
Sbjct: 414 MQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEM--GSKGFN-----PE 466

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  + + L +E  + +A ++  K++D  I+P  V YN+++ G C     ++A  +   
Sbjct: 467 INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSN 526

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           M+  G  P+  ++++++  L   G M EA  LL  +
Sbjct: 527 MVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTL 562


>gi|297817780|ref|XP_002876773.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322611|gb|EFH53032.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 199/394 (50%), Gaps = 36/394 (9%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           ++M + +  C PNV TY+T I+  C++G   +AL  F  M   +  F     PN VT+T 
Sbjct: 150 VYMGVMLKCCSPNVVTYSTWIDMFCKSGELKLALKSFNCMKR-DALF-----PNVVTFTC 203

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK G ++    L+ +M+   ++ NVVTY +LI GFC   +   A  +++ M++  
Sbjct: 204 LIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDR 263

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V+PN + +  I+N   + G  D A + L  M+  G+R +   Y  ++ G C  G++  A 
Sbjct: 264 VEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEAT 323

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E+   ME      ++  ++ ++N Y K+  ++ A+++Y +++ +G +PDVV  +T+  G+
Sbjct: 324 EIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGI 383

Query: 246 FEIHQVERAF------------------------------KLFDEMQRHGVAADTWAYRT 275
            +  Q+  A                               +LF ++   G+  D + Y +
Sbjct: 384 AKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTS 443

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
           +I GLCK G +V+A +L   +     ELD+ AY  LI GL   G +  A ++F  + R  
Sbjct: 444 WIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSG 503

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  D   ++++I A   +G M  A DL LDM+ +
Sbjct: 504 VCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTR 537



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 179/353 (50%), Gaps = 10/353 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  ++N++++ +C+ G    A+++   M      FG  C+P+ ++Y ++IDG C+ 
Sbjct: 51  GYAPHRSSFNSVVSFVCKLGQVKFAVDIVHSMP----RFG--CEPDVISYNSLIDGHCRN 104

Query: 74  GFVDKAKELFLKMKDE---NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           G +  A  +   ++        P++V++N+L +GF      +E   +++ +M +   PNV
Sbjct: 105 GDIRSACLVLESLRASYGFTCKPDIVSFNTLFNGFSKMKMLDEV-FVYMGVMLKCCSPNV 163

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V+++  ++  CK+G++  A +    M +  + PN   +  L+DG+C  G +     L+  
Sbjct: 164 VTYSTWIDMFCKSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEE 223

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M  +    NV +Y+ LI+G+CK  E++ A  +Y  ML   ++P+ ++Y T+  G F+   
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGD 283

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
            + A K   +M   G+  D  AY   I GLC  G + EA E+   +       D+  +  
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTT 343

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +++   KSGR+K A  ++  L       DVV  + MI  +  +G++ +A   F
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYF 396



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 77/363 (21%)

Query: 2   EAAALFMKLRVFGCE------PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV 55
           ++  L + L+ F C       PNV T+  LI+G C+ G   V ++L+EEM        V 
Sbjct: 175 KSGELKLALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRR------VR 228

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
              N VTYT +IDG CK+G + +A  ++L+M ++ + PN + Y ++I+GF    D + A 
Sbjct: 229 MSLNVVTYTALIDGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAM 288

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM------------------- 156
               +M++QG++ ++ ++ VI++ LC  GK+ EA+ ++E M                   
Sbjct: 289 KFLAKMLNQGMRLDITAYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAY 348

Query: 157 ----------------IQIGVRPNAFVYNTLMDGFCLTGRVNRA---------------- 184
                           I+ G  P+    +T++DG    G+++ A                
Sbjct: 349 FKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTV 408

Query: 185 --------------EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
                         E LF  +   G   + F Y+  I G CK   +  A  L ++M+ +G
Sbjct: 409 LIDALCKEEDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEG 468

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           ++ D+  Y TL  GL     +  A ++FDEM R GV  D+  +   I    K G +  A 
Sbjct: 469 LELDLFAYTTLIYGLTSKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTAS 528

Query: 291 ELF 293
           +L 
Sbjct: 529 DLL 531



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 152/330 (46%), Gaps = 39/330 (11%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V +A +   +++  +  P+ VT N  IH    +N    +      ++ +G  P+  SFN 
Sbjct: 2   VKEALQFLSRLRKSSNLPDPVTCNKHIHQLINSNCGALSLKFLAYLVSRGYAPHRSSFNS 61

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES-- 193
           +++ +CK G++  A  ++  M + G  P+   YN+L+DG C  G +  A  +  S+ +  
Sbjct: 62  VVSFVCKLGQVKFAVDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSACLVLESLRASY 121

Query: 194 -MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
              CK ++ S++ L NG+ K K ++    +Y  ++ K   P+VV Y+T      +  +++
Sbjct: 122 GFTCKPDIVSFNTLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDMFCKSGELK 180

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A K F+ M+R  +  +   +   IDG CK G +   V L+  +R ++  L++  Y  LI
Sbjct: 181 LALKSFNCMKRDALFPNVVTFTCLIDGYCKAGDLEVVVSLYEEMRRVRMSLNVVTYTALI 240

Query: 313 DGLCKSGRLKIAWELF------RSLPRGVLIA---------------------------- 338
           DG CK G ++ A  ++      R  P  ++                              
Sbjct: 241 DGFCKKGEMQRAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMR 300

Query: 339 -DVVTYNIMIHALCADGKMDKARDLFLDME 367
            D+  Y ++I  LC  GK+ +A ++  DME
Sbjct: 301 LDITAYGVIISGLCGIGKLKEATEIVEDME 330



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/296 (22%), Positives = 135/296 (45%), Gaps = 36/296 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +++++     EPN   Y T+ING  + G +  A+    +M N      +       
Sbjct: 251 RAGGMYLRMLEDRVEPNSLVYTTIINGFFQRGDSDNAMKFLAKMLNQGMRLDIT------ 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  II GLC  G + +A E+   M+  ++ P+++ + ++++ +  +     A  ++ ++
Sbjct: 305 AYGVIISGLCGIGKLKEATEIVEDMEKGDLVPDMMIFTTMMNAYFKSGRMKAAVNMYHKL 364

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEA------------------------------SR 151
           +++G +P+VV+ + +++ + KNG++ EA                               R
Sbjct: 365 IERGFEPDVVALSTMIDGIAKNGQLHEAISYFCTEKANDVMYTVLIDALCKEEDFIEVER 424

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L   + + G+ P+ F+Y + + G C  G +  A +L   M   G + ++F+Y+ LI G  
Sbjct: 425 LFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTKMVQEGLELDLFAYTTLIYGLT 484

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
               +  A  ++ EML  G+ PD  +++ L     +   +  A  L  +MQ  G+A
Sbjct: 485 SKGLMVEARQVFDEMLRSGVCPDSAVFDLLIRAYEKEGNMTTASDLLLDMQTRGLA 540


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 198/429 (46%), Gaps = 68/429 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   GC+PN FT+  L+ G C+ G T   L L   M +    FGV+  PN V 
Sbjct: 166 ARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES----FGVL--PNKVI 219

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS---------------------- 100
           Y TI+   C+EG  D ++++  KM++E + P++VT+NS                      
Sbjct: 220 YNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDME 279

Query: 101 -----------------LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN 143
                            ++ GFC      +AK LF  + +     ++ S+N+ +  L ++
Sbjct: 280 LDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           GK  EA  +L+ M   G+ P+ + YN LMDG C  G ++ A+ +   M+  G   +  +Y
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
             L++GYC   +++ A SL  EM+     P+    N L   L+++ ++  A +L  +M  
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL-------------------- 303
            G   DT      +DGLC +G + +A+E+ + +R+                         
Sbjct: 460 KGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENN 519

Query: 304 ---DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+  Y+ L++GLCK+GR   A  LF  +    L  D V YNI IH  C  GK+  A 
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAF 579

Query: 361 DLFLDMEAK 369
            +  DME K
Sbjct: 580 RVLKDMEKK 588



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 197/423 (46%), Gaps = 68/423 (16%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+  + + G  P  +T+N LI  LC +     A  LF+EM          CKPN  T+  
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG------CKPNEFTFGI 187

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ G CK G  DK  EL   M+   + PN V YN+++  FC     ++++ +  +M ++G
Sbjct: 188 LVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEG 247

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRL---LELMIQIGV-RPNAFVYNTLMDGFCLTGRV 181
           + P++V+FN  ++ LCK GK+ +ASR+   +EL   +G+ RPN+  YN ++ GFC  G +
Sbjct: 248 LVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307

Query: 182 NRAEELFVS-----------------------------------MESMGCKHNVFSYSIL 206
             A+ LF S                                   M   G   +++SY+IL
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNIL 367

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CK   +  A ++   M   G+ PD V Y  L  G   + +V+ A  L  EM R+  
Sbjct: 368 MDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNC 427

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             + +     +  L K G I EA EL R +    Y LD    N ++DGLC SG L  A E
Sbjct: 428 LPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487

Query: 327 LFR-----------------------SLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           + +                       SL     + D++TY+ +++ LC  G+  +A++LF
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547

Query: 364 LDM 366
            +M
Sbjct: 548 AEM 550



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 200/426 (46%), Gaps = 60/426 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  +  K+R  G  P++ T+N+ I+ LC+ G  + A  +F +M     E+  + +PN++
Sbjct: 235 DSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELD--EYLGLPRPNSI 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G CK G ++ AK LF  +++ +   ++ +YN  + G      + EA+ +  +M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G+ P++ S+N++M+ LCK G + +A  ++ LM + GV P+A  Y  L+ G+C  G+V
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+ L   M    C  N ++ +IL++   K   I  A  L  +M  KG   D V  N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA-----------------------DTWAYRTFID 278
             GL    ++++A ++   M+ HG AA                       D   Y T ++
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLN 532

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW------------- 325
           GLCK G   EA  LF  +   K + D  AYN  I   CK G++  A+             
Sbjct: 533 GLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHK 592

Query: 326 --ELFRSLPRGVLI--------------------ADVVTYNIMIHALCADGKMDKARDLF 363
             E + SL  G+ I                     ++ TYN  I  LC   K++ A +L 
Sbjct: 593 SLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLL 652

Query: 364 LDMEAK 369
            +M  K
Sbjct: 653 DEMMQK 658



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 179/386 (46%), Gaps = 31/386 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNT 60
           +A  LF  +R      ++ +YN  + GL R G  I A  + ++M + G G       P+ 
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIG-------PSI 361

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++DGLCK G +  AK +   MK   + P+ VTY  L+HG+C     + AK L  E
Sbjct: 362 YSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQE 421

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           MM     PN  + N++++ L K G++ EA  LL  M + G   +    N ++DG C +G 
Sbjct: 422 MMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGE 481

Query: 181 VNRAEELFVSMESMG-----------------------CKHNVFSYSILINGYCKNKEIE 217
           +++A E+   M   G                       C  ++ +YS L+NG CK     
Sbjct: 482 LDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFA 541

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A +L++EM+ + ++PD V YN       +  ++  AF++  +M++ G       Y + I
Sbjct: 542 EAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLI 601

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            GL     I E   L   ++      +I  YN  I  LC+  +++ A  L   + +  + 
Sbjct: 602 LGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIA 661

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
            +V ++  +I A C     D A+++F
Sbjct: 662 PNVFSFKYLIEAFCKVPDFDMAQEVF 687



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 162/314 (51%), Gaps = 4/314 (1%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           KP+   Y  +++   KE  V+    L+  M    I P   T+N LI   C ++  + A+ 
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           LF EM ++G +PN  +F +++   CK G  D+   LL  M   GV PN  +YNT++  FC
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGI---K 232
             GR + +E++   M   G   ++ +++  I+  CK  ++  A  ++S+M L + +   +
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P+ + YN +  G  ++  +E A  LF+ ++ +   A   +Y  ++ GL ++G  +EA  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
            + +        I +YN L+DGLCK G L  A  +   + R  +  D VTY  ++H  C+
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408

Query: 353 DGKMDKARDLFLDM 366
            GK+D A+ L  +M
Sbjct: 409 VGKVDAAKSLLQEM 422



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 184/386 (47%), Gaps = 30/386 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++   G  P++++YN L++GLC+ G    A  +   M   NG    VC P+ 
Sbjct: 343 IEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKR-NG----VC-PDA 396

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  ++ G C  G VD AK L  +M   N  PN  T N L+H        +EA+ L  +
Sbjct: 397 VTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM-----------------------I 157
           M ++G   + V+ N+I++ LC +G++D+A  +++ M                       I
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           +    P+   Y+TL++G C  GR   A+ LF  M     + +  +Y+I I+ +CK  +I 
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKIS 576

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +  +M  KG    +  YN+L +GL   +Q+     L DEM+  G++ +   Y T I
Sbjct: 577 SAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
             LC+   + +A  L   +       ++ ++  LI+  CK     +A E+F +    +  
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFET-AVSICG 695

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
                Y++M + L A G++ KA +L 
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELL 721



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 171/350 (48%), Gaps = 40/350 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +L  ++    C PN +T N L++ L + G    A  L  +M N  G +G+    +TVT
Sbjct: 415 AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEKG-YGL----DTVT 468

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMK-----------------------DENINPNVVTYN 99
              I+DGLC  G +DKA E+   M+                       + N  P+++TY+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           +L++G C A  + EAK LF EMM + +QP+ V++N+ ++  CK GK+  A R+L+ M + 
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G   +   YN+L+ G  +  ++     L   M+  G   N+ +Y+  I   C+ +++E A
Sbjct: 589 GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDA 648

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM-----QRHGVAADTWAYR 274
            +L  EM+ K I P+V  +  L     ++   + A ++F+       Q+ G+      Y 
Sbjct: 649 TNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YS 702

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
              + L   G +++A EL   +    +EL    Y  L++ LCK   L++A
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVA 752



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 126/247 (51%), Gaps = 4/247 (1%)

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           +P+V  +N+++    K  +++  S L + M+  G+ P  + +N L+   C +  V+ A E
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           LF  M   GCK N F++ IL+ GYCK    +  L L + M S G+ P+ VIYNT+     
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY----E 302
              + + + K+ ++M+  G+  D   + + I  LCK G +++A  +F  + + +Y     
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   YN ++ G CK G L+ A  LF S+     +A + +YNI +  L   GK  +A  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348

Query: 363 FLDMEAK 369
              M  K
Sbjct: 349 LKQMTDK 355



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 131/281 (46%), Gaps = 40/281 (14%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P++ TY+TL+NGLC+ G    A NLF EM       G   +P++V Y   I   CK+G
Sbjct: 520 CLPDLITYSTLLNGLCKAGRFAEAKNLFAEM------MGEKLQPDSVAYNIFIHHFCKQG 573

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +  A  +   M+ +  + ++ TYNSLI G    N   E   L  EM ++G+ PN+ ++N
Sbjct: 574 KISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYN 633

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
             +  LC+  K+++A+ LL+ M+Q  + PN F +  L++ FC     + A+E+F +  S+
Sbjct: 634 TAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI 693

Query: 195 -GCKHNVFS---------------------------------YSILINGYCKNKEIEGAL 220
            G K  ++S                                 Y  L+   CK  E+E A 
Sbjct: 694 CGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +  +M+ +G   D      +  GL ++   + A    D+M
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKM 794


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/339 (32%), Positives = 182/339 (53%), Gaps = 7/339 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F +    G  PNVFT NTL++  CR    + A+ ++  M   N       K +TV
Sbjct: 500 DALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLN------IKADTV 553

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G  + G VD+A  LF +M  ++  P+V+TY +LI G C     +   C+F  M
Sbjct: 554 TYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFM 613

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               V P++  +NV++N   + G ++ A  L   +++ G +P+ F +NT++  +C   R+
Sbjct: 614 CKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRL 673

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +LF  M S   + N  +++ILI+ +C+   ++ A+ ++S+ML +G +P++V Y+ L
Sbjct: 674 DDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCL 733

Query: 242 FIGLFEIHQ-VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
             G F+    +E   KL++EM  + +A +  +Y   IDGLCK G + EA   FR      
Sbjct: 734 IHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKH 793

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
              D+ AY  LI G CK GRL  A  L+ ++    L  D
Sbjct: 794 LLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 189/357 (52%), Gaps = 7/357 (1%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M +R+ G +PNV T++TLI+  C+ G+   A  LF+ MA GNG       P+ + Y+ +I
Sbjct: 297 MVVRI-GPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMA-GNG-----VTPDLIVYSILI 349

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           DGL K G ++  + L L   D+ I  +VV ++S +  +    D      ++  M+++G+ 
Sbjct: 350 DGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGIS 409

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PNVVS ++++   C+NG++ EA  L   ++++G  P+   Y+ L+ GFC +G +     L
Sbjct: 410 PNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYL 469

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           +  M    C+ +   YS+LING CK   +  AL  + + +++G+ P+V   NTL      
Sbjct: 470 YEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCR 529

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
           +  +  A K++  M    + ADT  Y   I G  + G + EA+ LF  +    ++ D+  
Sbjct: 530 LKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVIT 589

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           Y  LIDGLCK  +      +F  + +  +  D+  YN++I+    +G ++ A  LF+
Sbjct: 590 YCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFV 646



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 198/402 (49%), Gaps = 42/402 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF+++   G EP++ TY+ LI G C++G+      L+E+M          C+P+T
Sbjct: 429 LEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKR------CEPDT 482

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN----------- 109
           + Y+ +I+GLCK+G V  A   F +  +  ++PNV T N+L+  FC              
Sbjct: 483 IVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYL 542

Query: 110 ------------------------DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                                     +EA  LF +M+ +  +P+V+++  +++ LCK  K
Sbjct: 543 MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK 602

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                 + + M +  V P+  +YN L++     G +  A  LFV +   G K +VF+++ 
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNT 662

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I  YC  K ++ A+ L+++M S+ ++P+ + +  L        +++ A  +F +M   G
Sbjct: 663 MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEG 722

Query: 266 VAADTWAYRTFIDGLCKNGYIVEA-VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
              +   Y   I G  K+  ++E+ ++L+  +       +I +Y+ LIDGLCK G +K A
Sbjct: 723 PEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEA 782

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              FR      L+ DV+ Y I+I   C  G++ +A  L+ +M
Sbjct: 783 SCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNM 824



 Score =  148 bits (374), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 173/349 (49%), Gaps = 6/349 (1%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
            Y  ++N     G   + L   + +  G   FG+    + +T   I+ G+  +  +  A 
Sbjct: 239 VYEFVMNRFMNKGEVEMGLRFHKALVQGG--FGL----DIITCNKILKGIWMQNDIGVAD 292

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           + F  +      PNVVT+++LI  +C   + ++A  LF  M   GV P+++ ++++++ L
Sbjct: 293 DYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGL 352

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            K G++++  RLL + +  G++ +   +++ MD +   G + R  +++  M + G   NV
Sbjct: 353 FKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNV 412

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            S SILI G+C+N  I  A  L+ ++L  G +P ++ Y+ L  G  +   +   F L+++
Sbjct: 413 VSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYED 472

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M +     DT  Y   I+GLCK G + +A+  F          ++   N L+D  C+   
Sbjct: 473 MIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKC 532

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  A +++  +    + AD VTY I+I      G++D+A  LF  M  K
Sbjct: 533 IVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKK 581



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 162/346 (46%), Gaps = 10/346 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV--TYTTIIDGLCKEGFVDK 78
            Y  LI   CR G    ++++F  +       G+   PN V     ++ID  C E  VDK
Sbjct: 169 VYGFLIESYCRKGMFDKSVDIFMHVCVK----GIFVSPNVVYLLLGSLIDSHCVEVIVDK 224

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
             EL   M+++  +     Y  +++ F    +          ++  G   ++++ N I+ 
Sbjct: 225 YGELCSAMREQPFS----VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILK 280

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            +     +  A     ++++IG +PN   ++TL+D +C  G +++A  LF  M   G   
Sbjct: 281 GIWMQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTP 340

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           ++  YSILI+G  K   +E    L    L KGIK DVV +++      +I  + R  +++
Sbjct: 341 DLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIY 400

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
             M   G++ +  +    I G C+NG I+EA  LF  +  L +E  I  Y+ LI G CKS
Sbjct: 401 KRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKS 460

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           G L+  + L+  + +     D + Y+++I+ LC  G +  A   F 
Sbjct: 461 GNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFF 506



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 79/276 (28%), Positives = 140/276 (50%), Gaps = 7/276 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++     +P+V TY TLI+GLC+   +   L +F+ M            P+  
Sbjct: 570 EALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKN------AVAPDIA 623

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I+   +EG ++ A  LF+ + +    P+V T+N++I  +C     ++A  LF +M
Sbjct: 624 IYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKM 683

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG-FCLTGR 180
             + ++PN ++F ++++  C+ G+MD+A  +   M++ G  PN   Y+ L+ G F     
Sbjct: 684 TSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSM 743

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +    +L+  M       N+ SYSILI+G CK   ++ A   +   L K + PDV+ Y  
Sbjct: 744 MESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTI 803

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           L  G  ++ ++  A  L+D M  + +  D +  RT 
Sbjct: 804 LIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL 839



 Score =  124 bits (311), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 12/239 (5%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  YN LIN   R GH   AL LF  +           KP+  T+ T+I   C    +
Sbjct: 620 PDIAIYNVLINMHSREGHLEAALGLFVHVVERGP------KPDVFTFNTMICCYCNFKRL 673

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A +LF KM  E + PN +T+  LI  FC     ++A  +F +M+++G +PN+V+++ +
Sbjct: 674 DDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCL 733

Query: 137 MNELCKNGKMDEAS-RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++   K+  M E+  +L   M++  + PN   Y+ L+DG C  G +  A   F       
Sbjct: 734 IHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKH 793

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
              +V +Y+ILI GYCK   +  A+ LY  ML   + PD  +  TL     E +Q+++A
Sbjct: 794 LLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPDRFLERTL-----EEYQLKKA 847


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 204/393 (51%), Gaps = 42/393 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G E NV TYN+LI+G    G    A  + + M    GE G++   N VT T +I G C+
Sbjct: 247 LGFELNVVTYNSLIDGCVSIGDMERAEMVLKLM----GERGIL--RNKVTLTLLIKGYCR 300

Query: 73  EGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +  +++A+++  +M + E +  +   Y  LI G+C     ++A  L  EM++ G++ N+ 
Sbjct: 301 QCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLF 360

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
             N ++N  CKNG++ EA RLL  M+   + P ++ Y+TLMDGFC  G V +A  ++  M
Sbjct: 361 ICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM 420

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
             +G + NV +++ L+ G C+    E AL ++  ML +G+ PD V Y TL   LF++ + 
Sbjct: 421 LRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEF 480

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            RA  L++++   G    T+A+ T I+G CK   ++EA E F  ++ L +E D   Y  L
Sbjct: 481 FRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTL 540

Query: 312 IDGLCKSGRLKIAW---------------ELFRSLPRGV--------------------L 336
           IDG CK G ++ A+               EL+ SL  G+                    L
Sbjct: 541 IDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGL 600

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +VVTY  +I   C +G++DKA   + DM  K
Sbjct: 601 SPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEK 633



 Score =  183 bits (465), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 123/401 (30%), Positives = 192/401 (47%), Gaps = 41/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A AL+  +   G   + + +NT+ING C+    I A    EE  N   E G   +P+ V
Sbjct: 482 RALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEA----EETFNRMKELGF--EPDGV 535

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG CK G V++A ++  KM+ E I P++  YNSLI G   +    E   L  EM
Sbjct: 536 TYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEM 595

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PNVV++  ++   C  G++D+A      MI+ G  PN  + + ++      GR+
Sbjct: 596 CLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRI 655

Query: 182 NRAEELFVSMESMGC--KHNVFS---------------------------------YSIL 206
           + A  L   M ++     H  F                                  Y+I 
Sbjct: 656 DEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIA 715

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G CK+ +++ A  ++S +L +G  PD   Y TL  G      V  AF L DEM + G+
Sbjct: 716 IAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGL 775

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A +   Y   I+GLCK+G +  A +LF  L +     ++ +YN LIDG CK+G  + A +
Sbjct: 776 APNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALD 835

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L   + +  +   ++TY+ +I+  C  G M KA +L  +M 
Sbjct: 836 LRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMR 876



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 177/347 (51%), Gaps = 6/347 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           + Y  LI+G CR      A+ L +EM N      V  + N      +I+G CK G V +A
Sbjct: 325 YAYGVLIDGYCRVCKMDDAVRLRDEMLN------VGLRMNLFICNALINGYCKNGQVSEA 378

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
           + L ++M D ++ P   +Y++L+ GFC      +A  ++ EM+  G+Q NVV+ N ++  
Sbjct: 379 ERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKG 438

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LC+ G  ++A  +  LM++ GV P+   Y TL+D     G   RA  L+  + + G   +
Sbjct: 439 LCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRS 498

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
            ++++ +ING+CK +++  A   ++ M   G +PD V Y TL  G  ++  VE AFK+ +
Sbjct: 499 TYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKE 558

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M++  +      Y + I GL K+    E ++L   + +     ++  Y  LI G C  G
Sbjct: 559 KMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEG 618

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           RL  A+  +  +       +V+  + ++ +L   G++D+A  L   M
Sbjct: 619 RLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 665



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 192/461 (41%), Gaps = 111/461 (24%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   N+F  N LING C+ G    A  L   M + + E      P + +Y+T++DG C+E
Sbjct: 354 GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLE------PESYSYSTLMDGFCRE 407

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS- 132
           G V KA  ++ +M    I  NVVT+NSL+ G C    + +A  ++  M+ +GV P+ VS 
Sbjct: 408 GLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSY 467

Query: 133 ----------------------------------FNVIMNELCKNGKMDEASRLLELMIQ 158
                                             FN ++N  CK  KM EA      M +
Sbjct: 468 CTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKE 527

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES------------------------- 193
           +G  P+   Y TL+DG+C  G V  A ++   ME                          
Sbjct: 528 LGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTRE 587

Query: 194 ----------MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
                      G   NV +Y  LI G+C    ++ A + Y +M+ KG  P+V+I + +  
Sbjct: 588 VMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVS 647

Query: 244 GLFEIHQVERAFKLFDEMQR------HGV----------------AADTW---------- 271
            L+ + +++ A  L  +M        HG                  ADT           
Sbjct: 648 SLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLP 707

Query: 272 ---AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
               Y   I GLCK+G + +A ++F +L +  +  D   Y  LI G   +G +  A+ L 
Sbjct: 708 NSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLR 767

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             + +  L  +++TYN +I+ LC  G +D+A+ LF  +  K
Sbjct: 768 DEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLK 808



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 182/365 (49%), Gaps = 12/365 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L M++  +  EP  ++Y+TL++G CR G    A++++ EM        V  + N V
Sbjct: 377 EAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEM------LRVGIQSNVV 430

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ +++ GLC+ G  + A  ++  M    + P+ V+Y +L+       ++  A  L+ ++
Sbjct: 431 THNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDI 490

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G   +  +FN ++N  CK  KM EA      M ++G  P+   Y TL+DG+C  G V
Sbjct: 491 LARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNV 550

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   ME      ++  Y+ LI G  K+K+    + L SEM  KG+ P+VV Y TL
Sbjct: 551 EEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTL 610

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  ++++AF  + +M   G A +       +  L + G I EA  L + +  L  
Sbjct: 611 IAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDV 670

Query: 302 ELDIRAYNCLI---DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
            LD   ++ L    DG   S   KIA  L  S  +   + + V YNI I  LC  GK+D 
Sbjct: 671 FLDHGYFDRLHKADDGNLDSQ--KIADTLDES-SKSFSLPNSVVYNIAIAGLCKSGKVDD 727

Query: 359 ARDLF 363
           A+ +F
Sbjct: 728 AKKIF 732



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 185/428 (43%), Gaps = 74/428 (17%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGE 51
           +EA   F +++  G EP+  TY TLI+G C+ G+   A  + E+M            N  
Sbjct: 516 IEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSL 575

Query: 52  FGVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
            G + K                    PN VTY T+I G C EG +DKA   +  M ++  
Sbjct: 576 IGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGF 635

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEM------MDQGV------------------- 126
            PNV+  + ++         +EA  L  +M      +D G                    
Sbjct: 636 APNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIAD 695

Query: 127 ----------QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
                      PN V +N+ +  LCK+GK+D+A ++   ++  G  P+ F Y TL+ G+ 
Sbjct: 696 TLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYS 755

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G VN A  L   M   G   N+ +Y+ LING CK+  ++ A  L+ ++  KG+ P+V+
Sbjct: 756 AAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVI 815

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN L  G  +      A  L ++M + G++     Y   I G CK G + +A  L   +
Sbjct: 816 SYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEM 875

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM---------- 346
           R L  + +I  +  L++G  K G +K   +L   +   +  A V+++  M          
Sbjct: 876 RELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMMHITIPCAGVISHKQMELDVFSNAKE 935

Query: 347 IHALCADG 354
           +  LC DG
Sbjct: 936 MLKLCVDG 943



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 186/362 (51%), Gaps = 17/362 (4%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           F   P VF  + ++   C  G    AL++F+ M    G+ G  C P+  +   ++  L +
Sbjct: 144 FKFSPTVF--DMILKIYCEKGMIKNALHVFDNM----GKLG--CVPSLRSCNRLLSSLVR 195

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVV 131
           +G    A  ++  +    I P+V T + +++ +C  + W      F++ MD  G + NVV
Sbjct: 196 KGESSNAILVYDHINRLGIVPDVFTCSIMVNAYC-KDGWVNVAVDFVKEMDYLGFELNVV 254

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++N +++     G M+ A  +L+LM + G+  N      L+ G+C   ++  AE++   M
Sbjct: 255 TYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM 314

Query: 192 E-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           E S G   + ++Y +LI+GYC+  +++ A+ L  EML+ G++ ++ I N L  G  +  Q
Sbjct: 315 ERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQ 374

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V  A +L   M    +  ++++Y T +DG C+ G + +A+ ++  +  +  + ++  +N 
Sbjct: 375 VSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNS 434

Query: 311 LIDGLCKSGRLKIA---WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L+ GLC+ G  + A   W L   L RGV   D V+Y  ++  L   G+  +A  L+ D+ 
Sbjct: 435 LLKGLCRVGAFEDALHVWHLM--LKRGV-TPDEVSYCTLLDLLFKMGEFFRALALWNDIL 491

Query: 368 AK 369
           A+
Sbjct: 492 AR 493



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/370 (22%), Positives = 163/370 (44%), Gaps = 51/370 (13%)

Query: 26  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLK 85
           +N  C+  H +    +++E  +   E   +  P+   Y++++             EL   
Sbjct: 94  VNSHCKLVHILSRARMYDETRSYLNE---LVTPSKNNYSSLV----------VWNELVRV 140

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
            +D   +P V  ++ ++  +C       A  +F  M   G  P++ S N +++ L + G+
Sbjct: 141 FEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGE 198

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS- 204
              A  + + + ++G+ P+ F  + +++ +C  G VN A +    M+ +G + NV +Y+ 
Sbjct: 199 SSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNS 258

Query: 205 ----------------------------------ILINGYCKNKEIEGALSLYSEM-LSK 229
                                             +LI GYC+  ++E A  +  EM  S+
Sbjct: 259 LIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSE 318

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G+  D   Y  L  G   + +++ A +L DEM   G+  + +     I+G CKNG + EA
Sbjct: 319 GMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEA 378

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
             L   +     E +  +Y+ L+DG C+ G +  A  ++  + R  + ++VVT+N ++  
Sbjct: 379 ERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKG 438

Query: 350 LCADGKMDKA 359
           LC  G  + A
Sbjct: 439 LCRVGAFEDA 448



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 133/305 (43%), Gaps = 24/305 (7%)

Query: 84  LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM--------------------- 122
           L  K  N  PNV ++  L+H    A  ++E +    E++                     
Sbjct: 83  LASKQSNFRPNVNSHCKLVHILSRARMYDETRSYLNELVTPSKNNYSSLVVWNELVRVFE 142

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D    P V  F++I+   C+ G +  A  + + M ++G  P+    N L+      G  +
Sbjct: 143 DFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESS 200

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  ++  +  +G   +VF+ SI++N YCK+  +  A+    EM   G + +VV YN+L 
Sbjct: 201 NAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLI 260

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKY 301
            G   I  +ERA  +   M   G+  +       I G C+   + EA ++ R + R    
Sbjct: 261 DGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGM 320

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD  AY  LIDG C+  ++  A  L   +    L  ++   N +I+  C +G++ +A  
Sbjct: 321 VLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAER 380

Query: 362 LFLDM 366
           L + M
Sbjct: 381 LLMRM 385


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 188/364 (51%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
            F ++     E  V++   +++GLC+ G   +   L +E+A      GV  K N VTY  
Sbjct: 216 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK----GV--KANVVTYNA 269

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
            I+G  K   +    E+   M+ E +  NVVTY  LIHGF       EA+ LF EM ++G
Sbjct: 270 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 329

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ +V  +  I++  C++G +  A  L + M   G+ P+A  Y  L+ G C  G++  A+
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 389

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M+  G   N   ++ LI+GYC++  ++ AL L   M  KG++ DV  YN++  GL
Sbjct: 390 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            ++++ + A  L   M   GV+ +T ++ T ID  CK G  VEA  +FR +       +I
Sbjct: 450 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 509

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN LIDG  K G +K A +L   L    LI DV T   +IH  C DGK+D A  LF +
Sbjct: 510 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 569

Query: 366 MEAK 369
           M  +
Sbjct: 570 MPQR 573



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 185/357 (51%), Gaps = 12/357 (3%)

Query: 14  GCEPNVFTYNTLINGLCRT---GHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           G + NV TYN  I G  +    G     L L E+        GV C  N VTYT +I G 
Sbjct: 259 GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE-------GVAC--NVVTYTLLIHGF 309

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
              G +++A+ LF +M+++ I  +V  Y S+I   C + +   A  LF EM D+G+ P+ 
Sbjct: 310 SNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 369

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            ++  +++ +CK G+M+ A  L+  M   G+  N  ++NTL+DG+C +G V+ A  L V 
Sbjct: 370 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 429

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           ME  G + +VF+Y+ + +G CK    + A  L   M+ +G+ P+ + + TL     +   
Sbjct: 430 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 489

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
              A ++F EM+  G   +   Y   IDG  K G + EA +L   L       D+     
Sbjct: 490 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 549

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LI G C  G++ +A +LF  +P+  L+ +VVTY  MI  L  DG+ ++A  L+ +M+
Sbjct: 550 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 606



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 176/314 (56%), Gaps = 6/314 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++R  G E +V+ Y ++I+  CR+G+   AL LF+EM +     G++  P+  
Sbjct: 317 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK----GLI--PSAH 370

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G+CK G ++ A+ L  +M+ + I+ N V +N+LI G+C +   +EA  L + M
Sbjct: 371 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 430

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ +V ++N I + LCK  + DEA  LL  M++ GV PN   + TL+D +C  G  
Sbjct: 431 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 490

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ +F  ME  G   N+ +Y++LI+GY K   ++ A  L  E+ ++G+ PDV    +L
Sbjct: 491 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSL 550

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +V+ A KLFDEM + G+  +   Y   I GL K+G   EA +L+  ++    
Sbjct: 551 IHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 610

Query: 302 ELDIRAYNCLIDGL 315
             D   Y+ L+  L
Sbjct: 611 TPDDTVYSSLVGSL 624



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 149/301 (49%)

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            L + G VD     F +M + ++   V +   ++ G C   D    + L  E+  +GV+ 
Sbjct: 203 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 262

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV++N  +    K   +   + +L LM + GV  N   Y  L+ GF   G++  A+ LF
Sbjct: 263 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 322

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G + +V+ Y+ +I+  C++  ++ AL L+ EM  KG+ P    Y  L  G+ + 
Sbjct: 323 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 382

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            Q+E A  L +EMQ  G+  +   + T IDG C++G + EA+ L   +     E D+ AY
Sbjct: 383 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 442

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N +  GLCK  R   A  L  S+    +  + +++  +I   C +G   +A+ +F +ME 
Sbjct: 443 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 502

Query: 369 K 369
           K
Sbjct: 503 K 503



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 2/265 (0%)

Query: 107 YAND--WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           YA++  + EA   F  M  +G   +  S  V +  L + G++D   R    M+ + V   
Sbjct: 169 YADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVT 228

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            +    ++DG C  G V    +L   + + G K NV +Y+  I GY K  ++ G   + +
Sbjct: 229 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 288

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            M  +G+  +VV Y  L  G   I ++E A +LF+EM+  G+ AD + Y + I   C++G
Sbjct: 289 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 348

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +  A+ LF  +           Y  LI G+CK+G+++ A  L   +    +  + V +N
Sbjct: 349 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 408

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +I   C  G +D+A  L + ME K
Sbjct: 409 TLIDGYCESGMVDEALRLQVVMEKK 433



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 12/158 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F ++   G  PN+ TYN LI+G  + G+   A  L +E+ N     G++  P+ 
Sbjct: 491 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR----GLI--PDV 544

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T T++I G C +G VD A +LF +M    + PNVVTY ++I G        EA  L+ E
Sbjct: 545 YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 604

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           M + G+ P+   ++ ++      G +  A   + + IQ
Sbjct: 605 MKETGLTPDDTVYSSLV------GSLHSADESISMQIQ 636


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 181/346 (52%), Gaps = 6/346 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GCEP+V +Y+T+I+ LC+      A   F+ M        V C PN VTY+++IDGLCK 
Sbjct: 103 GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMR------AVGCAPNVVTYSSLIDGLCKV 156

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A  L +++K E++ P  + YN++++GF      +E   L + M ++G   N++ F
Sbjct: 157 DRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDF 216

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++ L KN + ++A +  E +++ G +PN   YN  + G C  G+V+ A  + + M  
Sbjct: 217 NAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVE 276

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +V +YS +I+G+CK   ++ A  +++ M+     P  V + TL  G  E  +   
Sbjct: 277 SKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSRE 336

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF++ ++M   G       Y   +D +C    +  A+E++  ++  K + D   Y  LI 
Sbjct: 337 AFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQ 396

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            LC++ R+  A E    +    ++ +    + ++  LC  G++D+A
Sbjct: 397 CLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEA 442



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 183/350 (52%), Gaps = 12/350 (3%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y T+ING C+ G    A  L +EM     E GV  K + + ++T+I GLC++G +D+A E
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMK----ERGV--KMDVLLHSTLIQGLCRKGRIDEALE 55

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM-----MDQGVQPNVVSFNVI 136
            F  M +E  +PNV+TYN++++G C AN  +E   LF +M        G +P+V+S++ +
Sbjct: 56  QFKSMGEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTV 114

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LCK  ++D+A    + M  +G  PN   Y++L+DG C   RV+ A  L + ++    
Sbjct: 115 IDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM 174

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
                 Y+ ++NG+ +  +    L L   M  KG   +++ +N +   L++  + E+A +
Sbjct: 175 VPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQ 234

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
            F+ + + G   +   Y   + GLCK G + EA  +   +   K   D+  Y+ +IDG C
Sbjct: 235 FFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFC 294

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K+GR+  A ++F  +     I   VT+  ++H      K  +A  +  DM
Sbjct: 295 KAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 344



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 197/409 (48%), Gaps = 51/409 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +++  G + +V  ++TLI GLCR G    AL  F+ M       G  C PN +
Sbjct: 17  QAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-------GEECSPNVI 69

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMK-----DENINPNVVTYNSLIHGFCYANDWNEAKC 116
           TY T+++GLCK   +D+  ELF  M+          P+V++Y+++I   C A   ++A  
Sbjct: 70  TYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 129

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            F  M   G  PNVV+++ +++ LCK  ++DEA  LL  +    + P A  YN +++GF 
Sbjct: 130 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNAVVNGFK 189

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G+ +   EL + M+  G   N+  ++ +++   KN E E A   +  +L  G KP+VV
Sbjct: 190 RQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 249

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN    GL +  +V+ A+++  EM    V  D   Y + IDG CK G + +A ++F   
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVF--T 307

Query: 297 RILKYEL-------------------------------------DIRAYNCLIDGLCKSG 319
           R++ +E                                       ++ YN L+D +C + 
Sbjct: 308 RMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGAD 367

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            ++ A E++  + R     D  TY  +I  LC   ++D+A++    MEA
Sbjct: 368 SVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEA 416



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 162/363 (44%), Gaps = 24/363 (6%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L MK + FG   N+  +N +++ L +      A   FE +           KPN VTY  
Sbjct: 202 LHMKEKGFGI--NIIDFNAMLHALWKNDEQEKACQFFERLLKSGK------KPNVVTYNV 253

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
            + GLCK G VD+A  + L+M +  + P+V+TY+S+I GFC A   ++A  +F  MM   
Sbjct: 254 AVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 313

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P+ V+F  +++   ++ K  EA R+ E M+  G  P    YN LMD  C    V  A 
Sbjct: 314 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 373

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E++  M+    + +  +Y+ LI   C+ + ++ A      M +  + P+  I + L   L
Sbjct: 374 EIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVL 433

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +V+ A  + D +                  +CK G   EAVE+   + +     D 
Sbjct: 434 CKQGEVDEACSVLDNVVE----------------ICKAGEPDEAVEVIEQMVLKGVRPDE 477

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  ++  LC   R+  A   F  +        +VTY ++I   C+    D A  +F  
Sbjct: 478 ATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEA 537

Query: 366 MEA 368
           M A
Sbjct: 538 MVA 540



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 114/208 (54%), Gaps = 6/208 (2%)

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           +Y T+++GFC  G+V++A EL   M+  G K +V  +S LI G C+   I+ AL  +  M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR-----HGVAADTWAYRTFIDGLC 281
             +   P+V+ YNT+  GL + ++++   +LFD+M++     HG   D  +Y T ID LC
Sbjct: 61  -GEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K   + +A E F+ +R +    ++  Y+ LIDGLCK  R+  A+ L   L    ++   +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
            YN +++     GK  +  +L L M+ K
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEK 207



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/338 (25%), Positives = 143/338 (42%), Gaps = 60/338 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F +L   G +PNV TYN  ++GLC+ G    A  +  EM            P+ +
Sbjct: 231 KACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESK------VTPDVI 284

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++IIDG CK G +DKA ++F +M      P+ VT+ +L+HGF       EA  +  +M
Sbjct: 285 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 344

Query: 122 MDQGVQPNVVSFNVIMNE-----------------------------------LCKNGKM 146
           ++ G  P + ++NV+M+                                    LC+  ++
Sbjct: 345 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRV 404

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA----------------EELFVS 190
           DEA   L++M    V PN  + + L++  C  G V+ A                +E    
Sbjct: 405 DEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEV 464

Query: 191 MESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           +E M   G + +  +Y  ++   C    ++ A++ + +M S+G  P +V Y  L      
Sbjct: 465 IEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACS 524

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
               + AF++F+ M   G        RT    L   GY
Sbjct: 525 ADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGY 562



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 6/119 (5%)

Query: 29  LCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD 88
           +C+ G    A+ + E+M       GV  +P+  TY  ++  LC    VD A   F KM  
Sbjct: 452 ICKAGEPDEAVEVIEQMVLK----GV--RPDEATYVAVLRSLCGLDRVDSAIAEFEKMAS 505

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
               P +VTY  LI   C A+  ++A  +F  M+  G  P   +   + + L   G  D
Sbjct: 506 RGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 184/356 (51%), Gaps = 6/356 (1%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
            +LF+++R  G  PNV  YN++I+ LC+      A+ + ++M      F   C P+ +T+
Sbjct: 294 GSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM------FASGCDPDIITF 347

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
            T+I GLC EG V KA+    +     +NPN ++Y  LIHGFC   +   A  L +EMM 
Sbjct: 348 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMG 407

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G  P+VV+F  +++ L   GK+ EA  + E M +  V P+  +YN L+ G C    +  
Sbjct: 408 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPA 467

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A+ +   M     + + F Y+ LI+G+ +++ +  A  ++  M  KG++PD+V  N +  
Sbjct: 468 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIK 527

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G  +   +  A      M++ G   D + Y T I G  K G +  A+     +   K + 
Sbjct: 528 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 587

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           ++  Y+ LI+G CK+G    A  LF ++    L  +VVTY I+I +L    K+ +A
Sbjct: 588 NVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 643



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 177/391 (45%), Gaps = 41/391 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V  YN LI+G CR G     L L  EM    G       P  VTY ++I+ L K+
Sbjct: 234 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEM-EAKGFL-----PTLVTYGSLINCLGKK 287

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++K   LFL+M+   ++PNV  YNS+I   C      +A  +  +M   G  P++++F
Sbjct: 288 GDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITF 347

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LC  G + +A   L   I+  + PN   Y  L+ GFC+ G +  A +L + M  
Sbjct: 348 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMG 407

Query: 194 MGCKHNVFS-----------------------------------YSILINGYCKNKEIEG 218
            G   +V +                                   Y++LI+G CK   +  
Sbjct: 408 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPA 467

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A ++  EML K ++PD  +Y TL  G      +  A K+F+ M+  GV  D  +    I 
Sbjct: 468 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIK 527

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G C+ G + EA+     +R +    D   Y  +I G  K G L  A      + +     
Sbjct: 528 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 587

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +VVTY+ +I+  C  G  D A  LF +M+A+
Sbjct: 588 NVVTYSSLINGYCKTGDTDSAEGLFANMQAE 618



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 157/340 (46%), Gaps = 6/340 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           ++   L+ GLC  G     L L E        +G  C P+ V Y  +IDG C+ G + + 
Sbjct: 205 YSTCVLVRGLCLEGRVEEGLKLIE------ARWGAGCIPHVVFYNVLIDGYCRRGDMGRG 258

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
             L  +M+ +   P +VTY SLI+      D  +   LF+EM  +G+ PNV  +N +++ 
Sbjct: 259 LLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDA 318

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LCK     +A  +L+ M   G  P+   +NTL+ G C  G V +AE             N
Sbjct: 319 LCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPN 378

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
             SY+ LI+G+C   E+  A  L  EM+ +G  PDVV +  L  GL    +V  A  + +
Sbjct: 379 QLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE 438

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M    V  D   Y   I GLCK   +  A  +   +     + D   Y  LIDG  +S 
Sbjct: 439 KMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 498

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            L  A ++F  +    +  D+V+ N MI   C  G M +A
Sbjct: 499 NLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEA 538



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/370 (29%), Positives = 183/370 (49%), Gaps = 21/370 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A+ L M++   G  P+V T+  LI+GL   G    AL + E+M     E  V   P+ 
Sbjct: 396 MAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMT----ERQVF--PDV 449

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  +I GLCK+  +  AK +  +M ++N+ P+   Y +LI GF  + +  +A+ +F  
Sbjct: 450 NIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 509

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +GV+P++VS N ++   C+ G M EA   +  M ++G  P+ F Y T++ G+   G 
Sbjct: 510 MEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 569

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A      M    CK NV +YS LINGYCK  + + A  L++ M ++ + P+VV Y  
Sbjct: 570 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 629

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL------------CKNGYIVE 288
           L   LF+  +V RA   F+ M  +  + +       ++GL            C    +  
Sbjct: 630 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 689

Query: 289 AVELFRTLRILKYEL-DIR--AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
              L    + L +++ D R  AYN +I  LC+   L+ A +    + +   + + +T+  
Sbjct: 690 KDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLS 749

Query: 346 MIHALCADGK 355
           +++  C+ GK
Sbjct: 750 LLYGFCSVGK 759



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 144/305 (47%), Gaps = 5/305 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN-PNVVTYNSLIHGFCYANDWNEAKC 116
           P       ++      G + KA ++  +++++  + P V   N L+        W++A+ 
Sbjct: 131 PTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 190

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L+ EM+ +    +  S  V++  LC  G+++E  +L+E     G  P+   YN L+DG+C
Sbjct: 191 LYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 250

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G + R   L   ME+ G    + +Y  LIN   K  ++E   SL+ EM  +G+ P+V 
Sbjct: 251 RRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQ 310

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           IYN++   L +     +A  +  +M   G   D   + T I GLC  G++ +A    R  
Sbjct: 311 IYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR-- 368

Query: 297 RILKYELDIR--AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             ++ EL+    +Y  LI G C  G L  A +L   +       DVVT+  +IH L   G
Sbjct: 369 EAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAG 428

Query: 355 KMDKA 359
           K+ +A
Sbjct: 429 KVSEA 433



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/363 (23%), Positives = 148/363 (40%), Gaps = 5/363 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
              + + G  P       L+      G    A ++ E +    G       P       +
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSL-----PEVTHCNRL 175

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           +  L ++   D A++L+ +M  E+   +  +   L+ G C      E   L       G 
Sbjct: 176 LKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGC 235

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
            P+VV +NV+++  C+ G M     LL  M   G  P    Y +L++     G + +   
Sbjct: 236 IPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGS 295

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
           LF+ M   G   NV  Y+ +I+  CK      A+ +  +M + G  PD++ +NTL  GL 
Sbjct: 296 LFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLC 355

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
               V +A     E  R  +  +  +Y   I G C  G ++ A +L   +    +  D+ 
Sbjct: 356 HEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVV 415

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            +  LI GL  +G++  A  +   +    +  DV  YN++I  LC    +  A+++  +M
Sbjct: 416 TFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEM 475

Query: 367 EAK 369
             K
Sbjct: 476 LEK 478


>gi|302776342|ref|XP_002971343.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
 gi|300161325|gb|EFJ27941.1| hypothetical protein SELMODRAFT_411983 [Selaginella moellendorffii]
          Length = 584

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 182/358 (50%), Gaps = 9/358 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA     +R  G  P+V T+  +I G C+      A  +F+EM   N      C+P+  
Sbjct: 113 DAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSN-----RCQPDCF 167

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMK-DENINPNVVTYNSLIHGFCYANDWNEA-KCLFI 119
            Y  +IDG CKE  +D+A EL  +M+ +  I P+VV YNS++ G C +N + EA K L  
Sbjct: 168 LYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDE 227

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M+ QG  P VV++  ++   CK  KM  A R+   M++  ++P    Y+ ++DG    G
Sbjct: 228 TMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAG 287

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           RV  A  +   ME++GC+ NV  Y+ LI+G CK+  ++ A +LY  M   G  P+   Y 
Sbjct: 288 RVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYA 347

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL        + E A  LFD + R     D   Y   + GLC+   + +A  LFR +R+ 
Sbjct: 348 TLIDTFCRNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMRLA 406

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKM 356
               D  AYN L+ G  +S R + A+ +   L      +A+++TYN +I   C +  M
Sbjct: 407 GVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESGM 464



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 184/351 (52%), Gaps = 9/351 (2%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           F  + +I+  C++G    AL +   M +          PN   + ++ID L K   +  A
Sbjct: 60  FLSSVVIDRACKSGDLRGALLILATMLHSG-----TPPPNQHAFASLIDALSKSTRLADA 114

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMN 138
                 M+D  I+P+VVT+  +I GFC       A  +F EM+     QP+   + V+++
Sbjct: 115 ARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEMIKSNRCQPDCFLYGVLID 174

Query: 139 ELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE-LFVSMESMGC 196
             CK  +MD A  LL E+ ++  ++P+  +YN+++DG C + R   A + L  +M   GC
Sbjct: 175 GYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSNRFLEAWKFLDETMVLQGC 234

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              V +Y+ LI G CK K+++ A+ +++ ML + I+P +V Y+ +  GL +  +V  A++
Sbjct: 235 SPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSYSVIIDGLSKAGRVYDAYR 294

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM+  G   +   Y T IDGLCK+G++ +A  L+R ++      + R Y  LID  C
Sbjct: 295 VVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKRSGAFPNQRTYATLIDTFC 354

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           ++ R + A  LF  + R     DV  Y  ++  LC + ++D AR LF +M 
Sbjct: 355 RNDRTETALGLFDHI-RDYCPLDVAMYTAVVSGLCRERRLDDARALFREMR 404



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 188/361 (52%), Gaps = 20/361 (5%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C+P+ F Y  LI+G C+      AL L  EM           +P+ V Y +I+DGLC+  
Sbjct: 162 CQPDCFLYGVLIDGYCKELRMDRALELLREM-----RVERRIQPDVVIYNSIVDGLCRSN 216

Query: 75  -FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            F++  K L   M  +  +P VVTY SLI G C A     A  ++  M+++ +QP +VS+
Sbjct: 217 RFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLAVRIWNAMLERKIQPTIVSY 276

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +VI++ L K G++ +A R++  M  +G   N  +Y TL+DG C +G ++ A  L+  M+ 
Sbjct: 277 SVIIDGLSKAGRVYDAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKR 336

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP-DVVIYNTLFIGLFEIHQVE 252
            G   N  +Y+ LI+ +C+N   E AL L+  +  +   P DV +Y  +  GL    +++
Sbjct: 337 SGAFPNQRTYATLIDTFCRNDRTETALGLFDHI--RDYCPLDVAMYTAVVSGLCRERRLD 394

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE----LDIRAY 308
            A  LF EM+  GV+ADT AY   + G  ++    EA   FR L  L  +     ++  Y
Sbjct: 395 DARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEA---FRILEELGDDPGCVANLLTY 451

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N +I G C    + + +E+ +   RG+   D  TY+ +I  L   G++ +A DL  +M A
Sbjct: 452 NTVIAGCCLESGMVLFYEMRQ---RGI-APDFATYSALIDRLLGSGEIGRAFDLCEEMLA 507

Query: 369 K 369
            
Sbjct: 508 S 508



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 130/270 (48%), Gaps = 18/270 (6%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P + +Y+ +I+GL + G    A  +  EM        + C+ N V YTT+IDGLCK GF
Sbjct: 270 QPTIVSYSVIIDGLSKAGRVYDAYRVVREMET------LGCELNVVIYTTLIDGLCKSGF 323

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  L+  MK     PN  TY +LI  FC  ND  E      + +      +V  +  
Sbjct: 324 LDDAYALYRIMKRSGAFPNQRTYATLIDTFCR-NDRTETALGLFDHIRDYCPLDVAMYTA 382

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LC+  ++D+A  L   M   GV  +   YN L+ G     R  R EE F  +E +G
Sbjct: 383 VVSGLCRERRLDDARALFREMRLAGVSADTHAYNVLLHG---AFRSERPEEAFRILEELG 439

Query: 196 ----CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
               C  N+ +Y+ +I G C    +E  + L+ EM  +GI PD   Y+ L   L    ++
Sbjct: 440 DDPGCVANLLTYNTVIAGCC----LESGMVLFYEMRQRGIAPDFATYSALIDRLLGSGEI 495

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            RAF L +EM   G++  +      +  LC
Sbjct: 496 GRAFDLCEEMLASGLSPPSGVLGRVVARLC 525



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/234 (32%), Positives = 118/234 (50%), Gaps = 14/234 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   GCE NV  Y TLI+GLC++G    A  L+  M   +G F     PN  
Sbjct: 291 DAYRVVREMETLGCELNVVIYTTLIDGLCKSGFLDDAYALYRIMKR-SGAF-----PNQR 344

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID  C+    + A  LF  ++D     +V  Y +++ G C     ++A+ LF EM
Sbjct: 345 TYATLIDTFCRNDRTETALGLFDHIRD-YCPLDVAMYTAVVSGLCRERRLDDARALFREM 403

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCL-TG 179
              GV  +  ++NV+++   ++ + +EA R+L EL    G   N   YNT++ G CL +G
Sbjct: 404 RLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPGCVANLLTYNTVIAGCCLESG 463

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            V     LF  M   G   +  +YS LI+    + EI  A  L  EML+ G+ P
Sbjct: 464 MV-----LFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEEMLASGLSP 512



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 60/221 (27%), Positives = 94/221 (42%), Gaps = 39/221 (17%)

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-------- 229
           +G  N A        + G     F  S++I+  CK+ ++ GAL + + ML          
Sbjct: 37  SGDANAAARFLREKTAAGSIFPGFLSSVVIDRACKSGDLRGALLILATMLHSGTPPPNQH 96

Query: 230 ----------------------------GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
                                       GI PDVV +  +  G  +   +ERA+++F EM
Sbjct: 97  AFASLIDALSKSTRLADAARALELMRDAGIHPDVVTFTVMIRGFCKNRMMERAWEIFQEM 156

Query: 262 -QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-LKYELDIRAYNCLIDGLCKSG 319
            + +    D + Y   IDG CK   +  A+EL R +R+  + + D+  YN ++DGLC+S 
Sbjct: 157 IKSNRCQPDCFLYGVLIDGYCKELRMDRALELLREMRVERRIQPDVVIYNSIVDGLCRSN 216

Query: 320 RLKIAWE-LFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           R   AW+ L  ++        VVTY  +I   C   KM  A
Sbjct: 217 RFLEAWKFLDETMVLQGCSPTVVTYTSLIRGACKAKKMKLA 257



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 11/159 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ALF ++R+ G   +   YN L++G  R+     A  + EE+ +  G     C  N +
Sbjct: 395 DARALFREMRLAGVSADTHAYNVLLHGAFRSERPEEAFRILEELGDDPG-----CVANLL 449

Query: 62  TYTTIIDGLCKE-GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY T+I G C E G V     LF +M+   I P+  TY++LI     + +   A  L  E
Sbjct: 450 TYNTVIAGCCLESGMV-----LFYEMRQRGIAPDFATYSALIDRLLGSGEIGRAFDLCEE 504

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           M+  G+ P       ++  LC + + D A++++E+ + +
Sbjct: 505 MLASGLSPPSGVLGRVVARLCWSRRGDLAAKVIEMAMAV 543


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 190/393 (48%), Gaps = 45/393 (11%)

Query: 10  LRVFGCE----PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LR  GC+    PN F+YN +I GL + G    A+ LF+EM     E  VV  PN +TY T
Sbjct: 175 LRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAVKLFDEMP----EKAVV--PNHITYNT 228

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC--------- 116
           +IDG  K+G ++    L+ +M    + PNV+TYN L+ G C A    E            
Sbjct: 229 MIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRK 288

Query: 117 --------------------------LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
                                     LF E + +GV+    + ++++N LCK+GK+ +A 
Sbjct: 289 MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAE 348

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            +L+ ++  G+     +YNTL++G+C  G +  A  +F  M+S   + +  +Y+ LING 
Sbjct: 349 EVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGL 408

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
            K + I  A  L  EM   G+ P V  +NTL        Q+E+ F +  +MQ  G+  + 
Sbjct: 409 GKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNV 468

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
            +Y + ++  CKNG I+EAV +   + I       + YN +ID   + G    A+ L   
Sbjct: 469 VSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEK 528

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +    +   +VTYN++I  LC   ++ +A +L 
Sbjct: 529 MKSSGVPPSIVTYNLLIKGLCKQSQISEAEELL 561



 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E AA+  ++      P+ FTY+ L +G  RTG +   L+LFEE      + G        
Sbjct: 276 ETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAY------ 329

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +++GLCK+G + KA+E+   + +  +    V YN+LI+G+C   D   A  +F +M
Sbjct: 330 TCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQM 389

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P+ +++N ++N L K  ++ EA  L+  M + GV P+   +NTL+D +   G++
Sbjct: 390 KSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQL 449

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +   +   M+  G K NV SY  ++N +CKN +I  A+++  +M  K + P   +YN +
Sbjct: 450 EKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAI 509

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                E    ++AF L ++M+  GV      Y   I GLCK   I EA EL  +LR    
Sbjct: 510 IDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGL 569

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+ +YN LI   C       A EL + + +  +     TY ++  +L   G++ +  +
Sbjct: 570 APDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMEN 629

Query: 362 LFLDM 366
           L+  M
Sbjct: 630 LYQQM 634



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 134/282 (47%), Gaps = 6/282 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A ++F +++     P+  TYN LINGL +      A +L  EM   NG       P+  T
Sbjct: 382 AFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEK-NG-----VNPSVET 435

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T+ID   + G ++K   +   M+++ + PNVV+Y S+++ FC      EA  +  +M 
Sbjct: 436 FNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVAILDDMF 495

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            + V P    +N I++   + G  D+A  L E M   GV P+   YN L+ G C   +++
Sbjct: 496 IKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLCKQSQIS 555

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            AEEL  S+ + G   +V SY+ LI+  C     + AL L  EM   GIKP    Y  LF
Sbjct: 556 EAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSPRTYRMLF 615

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             L    +V     L+ +M    V   +  Y   +D   K G
Sbjct: 616 SSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCG 657



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 131/274 (47%), Gaps = 6/274 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L +++   G  P+V T+NTLI+   R G       +  +M     E G+  KPN V
Sbjct: 416 EAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQ----EKGL--KPNVV 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y +I++  CK G + +A  +   M  +++ P    YN++I  +      ++A  L  +M
Sbjct: 470 SYGSIVNAFCKNGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKM 529

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV P++V++N+++  LCK  ++ EA  LL+ +   G+ P+   YNTL+   C     
Sbjct: 530 KSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNT 589

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA EL   M   G K +  +Y +L +       +    +LY +ML K + P   IYN +
Sbjct: 590 DRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIM 649

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
                +  +  +   L  EM   G+A   +   T
Sbjct: 650 VDAYAKCGEESKVEALRKEMSDKGIAVGDYTSMT 683



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 110/225 (48%), Gaps = 9/225 (4%)

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC----KHN 199
           G+  +     EL++    RP+ F +N  +    + G ++ A  +   +  MGC      N
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGM---LRRMGCDGAPAPN 187

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
            FSY+++I G  K      A+ L+ EM  K + P+ + YNT+  G  +   +E  F+L+ 
Sbjct: 188 AFSYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWS 247

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +M RHG+  +   Y   + GLC+ G + E   +   +   K   D   Y+ L DG  ++G
Sbjct: 248 QMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTG 307

Query: 320 RLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             +    LF  S+ +GV I    T +I+++ LC DGK+ KA ++ 
Sbjct: 308 DSQTMLSLFEESVKKGVKIG-AYTCSILLNGLCKDGKISKAEEVL 351



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 6/195 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA A+   + +    P    YN +I+     G T  A  L E+M +          P+ 
Sbjct: 485 LEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSG------VPPSI 538

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I GLCK+  + +A+EL   +++  + P+V++YN+LI   CY ++ + A  L  E
Sbjct: 539 VTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKE 598

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G++P+  ++ ++ + L   G++ E   L + M+   V P + +YN ++D +   G 
Sbjct: 599 MWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGE 658

Query: 181 VNRAEELFVSMESMG 195
            ++ E L   M   G
Sbjct: 659 ESKVEALRKEMSDKG 673


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/364 (33%), Positives = 188/364 (51%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
            F ++     E  V++   +++GLC+ G   +   L +E+A      GV  K N VTY  
Sbjct: 212 FFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAK----GV--KANVVTYNA 265

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
            I+G  K   +    E+   M+ E +  NVVTY  LIHGF       EA+ LF EM ++G
Sbjct: 266 FIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKG 325

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ +V  +  I++  C++G +  A  L + M   G+ P+A  Y  L+ G C  G++  A+
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M+  G   N   ++ LI+GYC++  ++ AL L   M  KG++ DV  YN++  GL
Sbjct: 386 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            ++++ + A  L   M   GV+ +T ++ T ID  CK G  VEA  +FR +       +I
Sbjct: 446 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 505

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN LIDG  K G +K A +L   L    LI DV T   +IH  C DGK+D A  LF +
Sbjct: 506 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 565

Query: 366 MEAK 369
           M  +
Sbjct: 566 MPQR 569



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 185/357 (51%), Gaps = 12/357 (3%)

Query: 14  GCEPNVFTYNTLINGLCRT---GHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           G + NV TYN  I G  +    G     L L E+        GV C  N VTYT +I G 
Sbjct: 255 GVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKE-------GVAC--NVVTYTLLIHGF 305

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
              G +++A+ LF +M+++ I  +V  Y S+I   C + +   A  LF EM D+G+ P+ 
Sbjct: 306 SNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSA 365

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            ++  +++ +CK G+M+ A  L+  M   G+  N  ++NTL+DG+C +G V+ A  L V 
Sbjct: 366 HTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVV 425

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           ME  G + +VF+Y+ + +G CK    + A  L   M+ +G+ P+ + + TL     +   
Sbjct: 426 MEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGN 485

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
              A ++F EM+  G   +   Y   IDG  K G + EA +L   L       D+     
Sbjct: 486 FVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTS 545

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           LI G C  G++ +A +LF  +P+  L+ +VVTY  MI  L  DG+ ++A  L+ +M+
Sbjct: 546 LIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMK 602



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/314 (34%), Positives = 176/314 (56%), Gaps = 6/314 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++R  G E +V+ Y ++I+  CR+G+   AL LF+EM +     G++  P+  
Sbjct: 313 EAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDK----GLI--PSAH 366

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G+CK G ++ A+ L  +M+ + I+ N V +N+LI G+C +   +EA  L + M
Sbjct: 367 TYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVM 426

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++ +V ++N I + LCK  + DEA  LL  M++ GV PN   + TL+D +C  G  
Sbjct: 427 EKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNF 486

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ +F  ME  G   N+ +Y++LI+GY K   ++ A  L  E+ ++G+ PDV    +L
Sbjct: 487 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSL 546

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +V+ A KLFDEM + G+  +   Y   I GL K+G   EA +L+  ++    
Sbjct: 547 IHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGL 606

Query: 302 ELDIRAYNCLIDGL 315
             D   Y+ L+  L
Sbjct: 607 TPDDTVYSSLVGSL 620



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 149/301 (49%)

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            L + G VD     F +M + ++   V +   ++ G C   D    + L  E+  +GV+ 
Sbjct: 199 ALRRGGQVDSCLRFFRRMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKA 258

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV++N  +    K   +   + +L LM + GV  N   Y  L+ GF   G++  A+ LF
Sbjct: 259 NVVTYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLF 318

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G + +V+ Y+ +I+  C++  ++ AL L+ EM  KG+ P    Y  L  G+ + 
Sbjct: 319 EEMREKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKA 378

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            Q+E A  L +EMQ  G+  +   + T IDG C++G + EA+ L   +     E D+ AY
Sbjct: 379 GQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAY 438

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           N +  GLCK  R   A  L  S+    +  + +++  +I   C +G   +A+ +F +ME 
Sbjct: 439 NSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEE 498

Query: 369 K 369
           K
Sbjct: 499 K 499



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 127/265 (47%), Gaps = 2/265 (0%)

Query: 107 YAND--WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           YA++  + EA   F  M  +G   +  S  V +  L + G++D   R    M+ + V   
Sbjct: 165 YADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVT 224

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            +    ++DG C  G V    +L   + + G K NV +Y+  I GY K  ++ G   + +
Sbjct: 225 VYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILT 284

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            M  +G+  +VV Y  L  G   I ++E A +LF+EM+  G+ AD + Y + I   C++G
Sbjct: 285 LMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSG 344

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +  A+ LF  +           Y  LI G+CK+G+++ A  L   +    +  + V +N
Sbjct: 345 NVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFN 404

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            +I   C  G +D+A  L + ME K
Sbjct: 405 TLIDGYCESGMVDEALRLQVVMEKK 429



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 6/140 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F ++   G  PN+ TYN LI+G  + G+   A  L +E+ N     G++  P+ 
Sbjct: 487 VEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENR----GLI--PDV 540

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T T++I G C +G VD A +LF +M    + PNVVTY ++I G        EA  L+ E
Sbjct: 541 YTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDE 600

Query: 121 MMDQGVQPNVVSFNVIMNEL 140
           M + G+ P+   ++ ++  L
Sbjct: 601 MKETGLTPDDTVYSSLVGSL 620


>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
          Length = 567

 Score =  192 bits (487), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 191/349 (54%), Gaps = 11/349 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TY T+I G C+ G    A  +F+ M           KPN + Y T+I+G CK+G +
Sbjct: 192 PDVSTYTTMIRGYCKMGMIENAKKVFDVMT---------VKPNLLAYNTMINGFCKKGDM 242

Query: 77  DKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + A+ +F +M   E+  PN VTY +LI G+C   +  EAK    EMM++G +PN +++N 
Sbjct: 243 ESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNA 302

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  LC NG++DEA  L+  M   G + N   + +++ G C+ G+ ++A     ++    
Sbjct: 303 MIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN 362

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +V SY ++ING+CK  + + A+SL  EM ++G+KP V  +N +F  L E  +++RA 
Sbjct: 363 MNPDVKSYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAI 422

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLC-KNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            L  +M +     +  +Y T I GLC   G + +  +L   +    + LD   Y+CL+ G
Sbjct: 423 LLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKG 482

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            C+ G ++   ++   +     +  + ++++++  LCA GK+ +A  LF
Sbjct: 483 YCEEGNVENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLF 531



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 173/333 (51%), Gaps = 7/333 (2%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           V   +PN+  YNT+ING C+ G    A  +F+ M +G       C PN VTYTT+IDG C
Sbjct: 219 VMTVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGED-----CLPNHVTYTTLIDGYC 273

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           K+G +++AK+   +M +    PN +TYN++I+G C     +EAK L  +M   G + NV 
Sbjct: 274 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 333

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +   ++  LC  GK D+A   L  +++  + P+   Y  +++GFC  G+ + A  L   M
Sbjct: 334 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 393

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL-FEIHQ 250
            + G K  VFS++ +     +N E++ A+ L  +M      P+ V YNT+  GL     +
Sbjct: 394 RARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGR 453

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++    L D M R G   D   Y   + G C+ G +   +++   +   KY + + +++ 
Sbjct: 454 MQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGNVENVMQIAHEMVTKKYVIGLESFSV 513

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           L+  LC  G++  A +LF +  R   + DV +Y
Sbjct: 514 LVKQLCAKGKVTEAEKLFDTCSRCPAV-DVDSY 545



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 156/304 (51%), Gaps = 6/304 (1%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +Y +++  L +   +  A+E F ++  EN+  P+V TY ++I G+C       AK +F  
Sbjct: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFCLTG 179
           M    V+PN++++N ++N  CK G M+ A  + + M+      PN   Y TL+DG+C  G
Sbjct: 220 MT---VKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVTYTTLIDGYCKKG 276

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A++    M + GC+ N  +Y+ +I G C N  ++ A  L ++M   G K +V  + 
Sbjct: 277 ELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHK 336

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           ++  GL  + + ++A      +    +  D  +Y   I+G CK G   EA+ L + +R  
Sbjct: 337 SMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEMRAR 396

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC-ADGKMDK 358
             +  + ++N +   L ++G L  A  L + +P+   + + V+YN +I  LC A G+M  
Sbjct: 397 GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLPNFVSYNTIICGLCMAKGRMQD 456

Query: 359 ARDL 362
             DL
Sbjct: 457 VEDL 460



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/321 (26%), Positives = 145/321 (45%), Gaps = 27/321 (8%)

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFL---KMKDENINPNVVTY------NSLIHGFCYAND 110
           T  YT I D L     +  A  L     K+ D  I+  +  Y       + I  F  A  
Sbjct: 92  TPCYTAITDVLLSHSLISIAASLLKNSNKLSDFFISKLIKAYGDRGNVKAAIFWFHQAKQ 151

Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV-RPNAFVYN 169
                CL+             S+N ++  L +   +  A      +++  V  P+   Y 
Sbjct: 152 IENGACLY-------------SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYT 198

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS- 228
           T++ G+C  G +  A+++F   + M  K N+ +Y+ +ING+CK  ++E A  ++  M+S 
Sbjct: 199 TMIRGYCKMGMIENAKKVF---DVMTVKPNLLAYNTMINGFCKKGDMESARLVFDRMMSG 255

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           +   P+ V Y TL  G  +  ++E A K  +EM   G   +   Y   I GLC NG + E
Sbjct: 256 EDCLPNHVTYTTLIDGYCKKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDE 315

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A  L   +R+  ++ ++  +  ++ GLC  G+   A    R++    +  DV +Y ++I+
Sbjct: 316 AKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVIN 375

Query: 349 ALCADGKMDKARDLFLDMEAK 369
             C  GK D+A  L  +M A+
Sbjct: 376 GFCKIGKSDEAISLLKEMRAR 396



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 7/223 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+R+ G + NV T+ +++ GLC  G    A+     +   N        P+  
Sbjct: 315 EAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQAVGYLRNVMEAN------MNPDVK 368

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I+G CK G  D+A  L  +M+   + P V ++N++        + + A  L  +M
Sbjct: 369 SYEVVINGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQM 428

Query: 122 MDQGVQPNVVSFNVIMNELC-KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
                 PN VS+N I+  LC   G+M +   L++ MI+ G   +  +Y+ L+ G+C  G 
Sbjct: 429 PQMDCLPNFVSYNTIICGLCMAKGRMQDVEDLVDRMIRSGHNLDFTMYSCLLKGYCEEGN 488

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           V    ++   M +      + S+S+L+   C   ++  A  L+
Sbjct: 489 VENVMQIAHEMVTKKYVIGLESFSVLVKQLCAKGKVTEAEKLF 531


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 191/395 (48%), Gaps = 30/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  LF ++   G +  V TYN +   LC+ G    A  + +EM                
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 47  ----NGNGEFGVVC-----------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                G G   VV            KPN    T  I  LCK G  ++A E++  +  + +
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
             N+ T N+LIHG C  N+  EA  +   M+D GV+ + +++N+++   CK  KM+EA +
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L + MI+ G +P+ F +NT +  +C  G+V     L   M+S G K ++ +Y  +I+GYC
Sbjct: 519 LRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYC 578

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K K++  A     E++  G++P+ VIYN L  G      +  A  + D M+ +G+     
Sbjct: 579 KAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPI 638

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y + +  +C  G + EA E+F    +   EL +  Y  +I G CK G++  A   F+ +
Sbjct: 639 TYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 698

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               +  + +TY  +++A C  G  ++A  LF +M
Sbjct: 699 HYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEM 733



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 179/365 (49%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA  F++L   G  P++ T N L+  L   G   +A  +F EM +GN        P+  T
Sbjct: 164 AADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNA-----VAPDVYT 218

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I  LC+ G +D A  +  +++   I P VVTYN L+   C +    EA  L   M+
Sbjct: 219 YTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMV 278

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  ++P++V+F +++N L +  +  E   +L+ M   G+ PN  +YN L+   C  G  +
Sbjct: 279 EGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCS 338

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  M S G K  V +Y+++    CK  E+E A  +  EML  G+     ++N++ 
Sbjct: 339 EALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVV 398

Query: 243 I-GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    +++   +L  EM    +  +       I  LCK G   EA E++  +     
Sbjct: 399 AWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGL 458

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            ++I   N LI GLC+   +K A ++ +++    +  D +TYNIMI   C   KM++A  
Sbjct: 459 GVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQ 518

Query: 362 LFLDM 366
           L  DM
Sbjct: 519 LRDDM 523



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/290 (31%), Positives = 148/290 (51%), Gaps = 6/290 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   G E +  TYN +I   C+      A+ L ++M           KP+  
Sbjct: 480 EATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG------FKPDLF 533

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T +   C  G V+    L  +MK E + P++VTY ++I G+C A D ++A    IE+
Sbjct: 534 TFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIEL 593

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++PN V +N ++    +NG + +A  +L+ M   G++P    YN+LM   C  G V
Sbjct: 594 IKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLV 653

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+E+F        +  V  Y+I+I G+CK  +I+ A+  + EM  + I+P+ + Y TL
Sbjct: 654 EEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTL 713

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
                +    E AFKLFDEM   G+  DT +Y T I G C+   + + VE
Sbjct: 714 MYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVE 763



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/249 (31%), Positives = 125/249 (50%), Gaps = 6/249 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P++FT+NT +   C  G     L+L ++M +         KP+ VTY TIIDG CK 
Sbjct: 527 GFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEG------LKPDIVTYGTIIDGYCKA 580

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             V KA +  +++    + PN V YN+LI G+      ++A  +   M   G+QP  +++
Sbjct: 581 KDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITY 640

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +M  +C  G ++EA  +    I   +      Y  ++ GFC  G+++ A   F  M  
Sbjct: 641 NSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHY 700

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
              + N  +Y+ L+  YCK    E A  L+ EM+S GI PD V YNTL  G  E+  +++
Sbjct: 701 RDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDK 760

Query: 254 AFKLFDEMQ 262
             +   EM 
Sbjct: 761 IVESPAEMS 769



 Score =  117 bits (294), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 8/224 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALN-LFEEMANGNGEFGVVCKPNTVTYT 64
           L  +++  G +P++ TY T+I+G C+      A   L E + NG        +PN V Y 
Sbjct: 554 LLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNG-------LRPNAVIYN 606

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +I G  + G +  A  +   MK   I P  +TYNSL++  C+A    EAK +F + + +
Sbjct: 607 ALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILK 666

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            ++  V+ + +I+   CK GK+DEA    + M    +RPN   Y TLM  +C  G    A
Sbjct: 667 NIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEA 726

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
            +LF  M S G   +  SY+ LI+G C+   ++  +   +EM S
Sbjct: 727 FKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVESPAEMSS 770



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 5/163 (3%)

Query: 211 CKNKEIEGALS----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR-HG 265
           C N    G+LS     + E+ ++G  P +   N L   L    Q++ A K+F EM+  + 
Sbjct: 152 CLNSPAPGSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNA 211

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           VA D + Y   I  LC+ G I  A  +   L     +  +  YN L+D LC+SGR++ A+
Sbjct: 212 VAPDVYTYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAF 271

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +L   +  G L   +VT+ I+I+ L    +  +   +  +ME 
Sbjct: 272 QLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEG 314


>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 660

 Score =  191 bits (486), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 184/350 (52%), Gaps = 6/350 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FTY+  I+ LC++      + L EE+      FG    P+       ID LCK+  +  A
Sbjct: 226 FTYSRWISALCQSNR----IELVEELLADMDRFGF--SPDIWACNIYIDCLCKQNRLHDA 279

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            ++  KM+ +   P+VVTY +++   C    ++EA  L+ EM+  G++P+VV+   ++  
Sbjct: 280 LQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFG 339

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LCKN K++EA  L   M+ + +  +  +YN L+ GF   G +++A  +   M + GC+  
Sbjct: 340 LCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPG 399

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V +Y+IL+N YC    +E A +L ++M + G+ PD   YN L  GL + HQ+++AF    
Sbjct: 400 VVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVS 459

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +    G   D  +    ID  CK   +  A+ELF+ +     + D   Y  LI+GL   G
Sbjct: 460 DHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVG 519

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +A ELF  + +  +  +V  YNIM+H LC  G + +A+ +FL M  K
Sbjct: 520 YYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQK 569



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 186/364 (51%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L   +  FG  P+++  N  I+ LC+      AL + E+M  G G       P+ VTYTT
Sbjct: 247 LLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKM-RGKGTI-----PDVVTYTT 300

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++  LC      +A  L+ +M    + P+VV   +LI G C  +   EA  L   M+   
Sbjct: 301 VVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFELASRMLSLN 360

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ +V  +N +++   + G +D+A  ++  M   G  P    YN L++ +C  G + +AE
Sbjct: 361 IELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAE 420

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   ME+ G   + +SY+ L+ G CK  +++ A +  S+ +  G   D+V  N L    
Sbjct: 421 NLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAF 480

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            ++ +V+ A +LF EM   G+ AD   Y T I+GL   GY   A ELF  +   + + ++
Sbjct: 481 CKVKKVKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNV 540

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN ++  LCK G LK A ++F  + +  ++ D+VTYN +I+ L  + +  +A DLF D
Sbjct: 541 NLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKD 600

Query: 366 MEAK 369
           M  K
Sbjct: 601 MRTK 604



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 118/364 (32%), Positives = 195/364 (53%), Gaps = 10/364 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  K+R  G  P+V TY T++  LC       A+ L+EEM     + G+  KP+ V
Sbjct: 278 DALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMV----KMGL--KPDVV 331

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
               +I GLCK   V++A EL  +M   NI  +V  YN+LI GF  A   ++A  +   M
Sbjct: 332 ACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFM 391

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P VV++N+++N  C  G M++A  L+  M   GV P+ + YN L+ G C T ++
Sbjct: 392 RTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQL 451

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A         +G   ++ S +ILI+ +CK K+++ AL L+ EM  KG++ D V Y TL
Sbjct: 452 DKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQADAVTYGTL 511

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF +     A +LF++M +  +  +   Y   +  LCK G +  A ++F  L +++ 
Sbjct: 512 INGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIF--LHMIQK 569

Query: 302 EL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           E+  DI  YN LI  L K+ R   A +LF+ +    +  D +T+  +I+ L  +G+   A
Sbjct: 570 EILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLA 629

Query: 360 RDLF 363
            +++
Sbjct: 630 YEVW 633



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 159/349 (45%), Gaps = 8/349 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           Y  L++G  R G     +  F+EM  +G  EFG+        Y   I  L K    D  +
Sbjct: 158 YRILLSGYVRAGKFDSVIGTFDEMVMSGCREFGI-------DYNRYIGVLIKNCCFDLVE 210

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           + +     + +     TY+  I   C +N     + L  +M   G  P++ + N+ ++ L
Sbjct: 211 KYYGMALSKGLCLTPFTYSRWISALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCL 270

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CK  ++ +A +++E M   G  P+   Y T++   C   R + A  L+  M  MG K +V
Sbjct: 271 CKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDV 330

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +   LI G CKN ++E A  L S MLS  I+  V IYN L  G +    +++A+ +   
Sbjct: 331 VACGALIFGLCKNSKVEEAFELASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISF 390

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+ +G       Y   ++  C  G + +A  L   +       D  +YN L+ GLCK+ +
Sbjct: 391 MRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQ 450

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L  A+             D+V+ NI+I A C   K+  A +LF +M+ K
Sbjct: 451 LDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYK 499



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 130/260 (50%), Gaps = 6/260 (2%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GCEP V TYN L+N  C  G    A NL  +M       GV   P+  +Y  ++ G
Sbjct: 391 MRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKMETS----GV--NPDRYSYNQLLKG 444

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK   +DKA        +     ++V+ N LI  FC       A  LF EM  +G+Q +
Sbjct: 445 LCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKVKKVKSALELFKEMDYKGMQAD 504

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            V++  ++N L   G  + A  L E M++  + PN  +YN ++   C  G + RA+++F+
Sbjct: 505 AVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFL 564

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M       ++ +Y+ LI    KN     AL L+ +M +KG++PD + +  L  GL +  
Sbjct: 565 HMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTKGVEPDSLTFKYLINGLLDEG 624

Query: 250 QVERAFKLFDEMQRHGVAAD 269
           +   A+++++ M  +G+  D
Sbjct: 625 RSTLAYEVWEYMMENGIILD 644



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 100/227 (44%)

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I++ L  +G     S  L  +   GV  +  +Y  L+ G+   G+ +     F  M   G
Sbjct: 126 IVSLLFVDGNFALLSEFLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIGTFDEMVMSG 185

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
           C+     Y+  I    KN   +     Y   LSKG+      Y+     L + +++E   
Sbjct: 186 CREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFTYSRWISALCQSNRIELVE 245

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +L  +M R G + D WA   +ID LCK   + +A+++   +R      D+  Y  ++  L
Sbjct: 246 ELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCL 305

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           C + R   A  L+  + +  L  DVV    +I  LC + K+++A +L
Sbjct: 306 CNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLCKNSKVEEAFEL 352


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 185/363 (50%), Gaps = 11/363 (3%)

Query: 1   MEAAALFMKLR---VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           ++ A  F++ R   V GC PN  TYN L +  CR G+  +A  L  +M            
Sbjct: 225 LQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKER------VT 278

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKD--ENINPNVVTYNSLIHGFCYANDWNEAK 115
           PN VT  TI+ GLC  G V  A E F + +        N VTY++L+  F + N+   A 
Sbjct: 279 PNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAM 338

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM+D+G  P+ + +  +++ L + G++D+A  +   M + G + +A  YN L+ GF
Sbjct: 339 ELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGF 398

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   R+N A EL   M+  G + +V++Y+ L++G CK  +      L  +M+  G +P V
Sbjct: 399 CRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSV 458

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V + TL  G  ++ Q++ A ++F  M   G+  +T  Y T ID LCK+     A+ELF  
Sbjct: 459 VTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDE 518

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +R      ++  +N L+ GL      + A+EL   +  G    D VT +I++  L   G+
Sbjct: 519 MREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTIDILMEWLPVIGE 578

Query: 356 MDK 358
            D+
Sbjct: 579 TDR 581



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/372 (29%), Positives = 179/372 (48%), Gaps = 14/372 (3%)

Query: 4   AALFMK--LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           AA F++  L      P+   +NTL++ L + G       LF  M + +       +PN V
Sbjct: 120 AARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDAS------VRPNVV 173

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           TY  ++ GLCK G V  A  +   M   + ++ P+VV  N+++ G C      +A     
Sbjct: 174 TYGILVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVE 233

Query: 120 EMMD--QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           E M    G  PN V++N + +  C+ G +  A  L+  M +  V PNA   NT++ G C 
Sbjct: 234 ERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCW 293

Query: 178 TGRVNRAEELFVSMESM--GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
            GRV  A E F    ++    + N  +YS L+  +     +  A+ L+ EM+ +G  PD 
Sbjct: 294 VGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDA 353

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           ++Y T+  GL +  +++ A+ +   M++ G   D  AY   I G C+   + EA EL   
Sbjct: 354 IMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGE 413

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++    + D+  YN L+ GLCK+G      EL   +  G     VVT+  +IH  C  G+
Sbjct: 414 MKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQ 473

Query: 356 MDKARDLFLDME 367
           +D+A  +F  M+
Sbjct: 474 IDEALRIFRSMD 485



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/398 (30%), Positives = 186/398 (46%), Gaps = 45/398 (11%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF  +R     PNV TY  L+ GLC+ G    AL++ + M+    +   VC P+ V    
Sbjct: 159 LFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPESD---VC-PDVVMLNN 214

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENIN---PNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           I+DGLCK G + +A + F++ +  +++   PN VTYN L H FC A +   A  L  +M 
Sbjct: 215 IVDGLCKTGRLQQAVK-FVEERMRSVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKME 273

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEA--------------------------------- 149
            + V PN V+ N I+  LC  G++  A                                 
Sbjct: 274 KERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNN 333

Query: 150 ----SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                 L   M+  G  P+A +Y T++ G    GR++ A  +  SM+  G + +  +Y+I
Sbjct: 334 VGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNI 393

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI G+C+ K +  A  L  EM   G++PDV  YNTL  GL +        +L  +M   G
Sbjct: 394 LIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGG 453

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
                  + T I G CK G I EA+ +FR++     + +   YN LID LCKS    +A 
Sbjct: 454 CRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAI 513

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ELF  +    + A+V T+N ++  L      +KA +L 
Sbjct: 514 ELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELM 551



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 6/141 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V T+ TLI+G C+ G    AL +F  M     E G+  +PNTV Y T+ID LCK 
Sbjct: 453 GCRPSVVTFGTLIHGYCKVGQIDEALRIFRSM----DESGI--QPNTVIYNTLIDFLCKS 506

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                A ELF +M+++++  NV T+N+L+ G    N   +A  L   M +    P+ V+ 
Sbjct: 507 RDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTPDYVTI 566

Query: 134 NVIMNELCKNGKMDEASRLLE 154
           +++M  L   G+ D     ++
Sbjct: 567 DILMEWLPVIGETDRLKHFMQ 587


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 182/350 (52%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+  YNTLI+G C+ G    A  LF+++       G +  P   T+ ++++G CK 
Sbjct: 238 GCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMK----GFI--PTLQTFGSLVNGFCKM 291

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  +    L L+MKD  ++ NV  YN++I          +AK    EM +   +P++V++
Sbjct: 292 GMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTY 351

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N  C  G+++EA +LLE  I+ G+ PN   Y  L+ G+C  G   +A +  + M +
Sbjct: 352 NTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMST 411

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + ++ SY  LI+G     E++ AL++   M+++GI PD  IYN L  GLF+  ++  
Sbjct: 412 SGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSM 471

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  +  EM    +A D + Y T +DG  ++G + EA +LF+ +     +  +  YN +I 
Sbjct: 472 AKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIK 531

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G  KSG +  A      + R   + D+ T++ +I        M+    +F
Sbjct: 532 GFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIF 581



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 189/358 (52%), Gaps = 6/358 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L ++++  G   NV  YN +I+   + G  I A +  +EM+         C+P+ VTY T
Sbjct: 300 LLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSEN------CCEPDLVTYNT 353

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I+  C  G V++A++L  +     + PN +TY  L+HG+C   ++ +A    IEM   G
Sbjct: 354 LINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSG 413

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ +++S+  +++ L   G++D A  + + M+  G+ P+A +YN LM+G    G+++ A+
Sbjct: 414 LEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAK 473

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +   M       + F Y+ L++G+ ++  ++ A  L+  ++ KG+ P VV YN +  G 
Sbjct: 474 VMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGF 533

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A    D+M+R     D + + T IDG  K   +   +++F  +     + ++
Sbjct: 534 SKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNV 593

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             Y  LI+G C+ G  K+A +LF  +    L   VVTY+I+I + C + K+ KA   F
Sbjct: 594 VTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYF 651



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 186/375 (49%), Gaps = 20/375 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A    +++   G E ++ +Y  LI+GL   G    AL + + M N     G++  P+  
Sbjct: 401 KATDYLIEMSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNR----GIL--PDAN 454

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +++GL K+G +  AK +  +M D+NI P+   Y +L+ GF    + +EAK LF  +
Sbjct: 455 IYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLI 514

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G+ P VV +NV++    K+G MD A   ++ M +    P+ F ++T++DG+     +
Sbjct: 515 IEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNM 574

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N   ++F  M    CK NV +Y+ LINGYC+  E + A  L+S M S G+KP VV Y+ L
Sbjct: 575 NAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSIL 634

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE---------- 291
                +  ++ +A   F+ M  +    +  A+   ++G         + E          
Sbjct: 635 IGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRS 694

Query: 292 ----LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
                F  +    +     AYNC++  LC+   +K A +L   +    L +D V++  +I
Sbjct: 695 MFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALI 754

Query: 348 HALCADGKMDKARDL 362
           H +C +G   + R++
Sbjct: 755 HGICLEGNSKEWRNM 769



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 10/248 (4%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA-------FVYNTLMDGFCLTGR 180
           P+  + N ++N L K+ +++ A +L + MI    R N        +  + ++ G CL GR
Sbjct: 167 PSTYACNSLLNLLVKHRRIETAHQLYDEMID---RDNGDDICVDNYTTSIMVKGLCLKGR 223

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +    +L  S    GC  N+  Y+ LI+GYCK  E+E A  L+ ++  KG  P +  + +
Sbjct: 224 IEDGIKLIESRWGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGS 283

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++   E    L  EM+  G++ +   Y   ID   K G+ ++A +  + +    
Sbjct: 284 LVNGFCKMGMFEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENC 343

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E D+  YN LI+  C  G ++ A +L     R  L  + +TY  ++H  C  G+  KA 
Sbjct: 344 CEPDLVTYNTLINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKAT 403

Query: 361 DLFLDMEA 368
           D  ++M  
Sbjct: 404 DYLIEMST 411



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/237 (24%), Positives = 92/237 (38%), Gaps = 61/237 (25%)

Query: 10  LRVFG------CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           L++FG      C+PNV TY +LING CR G T +A  LF  M +         KP+ VTY
Sbjct: 578 LKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHG------LKPSVVTY 631

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC----------------- 106
           + +I   CKE  + KA   F  M      PN   ++ L++GF                  
Sbjct: 632 SILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHEN 691

Query: 107 ------------YANDWNEA----KCLFI----------------EMMDQGVQPNVVSFN 134
                         + W +      C+ I                +M+  G+  + VSF 
Sbjct: 692 SRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFV 751

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
            +++ +C  G   E   ++   +  G    A  Y+  +D F   G ++ A  +  +M
Sbjct: 752 ALIHGICLEGNSKEWRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAM 808



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/192 (24%), Positives = 87/192 (45%), Gaps = 8/192 (4%)

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEI---EGALSLYSEMLS-KGIKPDVVIYNTL 241
           E+  ++E M  K  + +   L +  C   ++   + AL +Y  ++      P     N+L
Sbjct: 116 EIEFTLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSL 175

Query: 242 FIGLFEIHQVERAFKLFDEM----QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
              L +  ++E A +L+DEM        +  D +     + GLC  G I + ++L  +  
Sbjct: 176 LNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRW 235

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +I  YN LIDG CK G ++ A++LF+ L     I  + T+  +++  C  G  +
Sbjct: 236 GKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFE 295

Query: 358 KARDLFLDMEAK 369
               L L+M+ +
Sbjct: 296 AIDLLLLEMKDR 307



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 81/176 (46%), Gaps = 8/176 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVAL---NLFEEMANGNGEF-----G 53
           +A + F  + +  C PN   ++ L+NG   T  T V+    NL E   +   +F     G
Sbjct: 646 KAVSYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIG 705

Query: 54  VVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
                    Y  I+  LC++  V  A +L  KM    +  + V++ +LIHG C   +  E
Sbjct: 706 DGWTQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKE 765

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
            + +    +++G     + +++ +++    G + EAS +L+ MI+  V PN  + N
Sbjct: 766 WRNMISCDLNEGELQIALKYSLELDKFIPEGGISEASGILQAMIKGYVSPNQDLNN 821


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 186/349 (53%), Gaps = 6/349 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+P+V TY  LI      G    AL LF+E+ +         +P+  TY  II G+CKE
Sbjct: 196 GCKPSVITYTILIEATILEGRINEALELFDELVSRG------LRPDLYTYNAIIRGICKE 249

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G  D+A +    +     NP+VV+YN L+  F   + W + + L  +M+  G +PNVV+ 
Sbjct: 250 GMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  C+ G++ EA  +LE+M + G+ P+++ Y+ L+  FC  GR++ A E    M S
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  ++ +Y+ ++   CK    + AL ++ ++   G  P V  YNT+F  L+      +
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++  EM R G+  D   Y + I  LC++G + EA+ L   +   +++  + ++N ++ 
Sbjct: 430 ALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLL 489

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           G+CK+ R+    EL  ++     + +  +Y ++I  +   G   +A +L
Sbjct: 490 GMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMEL 538



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 177/359 (49%), Gaps = 7/359 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           L  +G +P+V++YN +I+G  +      A  +F+ M +          P+ VTY  +I  
Sbjct: 123 LETYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRG------FSPDVVTYNIMIGS 175

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LC  G ++ A E+  ++  +   P+V+TY  LI         NEA  LF E++ +G++P+
Sbjct: 176 LCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPD 235

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
           + ++N I+  +CK G  D A   +  +   G  P+   YN L+  F    R    E L  
Sbjct: 236 LYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMK 295

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M   GC+ NV ++SILI+ +C+   +  A+++   M  KG+ PD   Y+ L     +  
Sbjct: 296 DMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEG 355

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +++ A +  ++M   G   D   Y T +  LCK G    A+++F  L  +     +RAYN
Sbjct: 356 RLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYN 415

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +   L   G    A E+   + R  +  D +TYN +I  LC DG +D+A  L +DMEA
Sbjct: 416 TMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEA 474



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 165/341 (48%), Gaps = 11/341 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF +L   G  P+++TYN +I G+C+ G    AL+    ++         C P+ V
Sbjct: 219 EALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARG------CNPDVV 272

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++     +   +  + L   M      PNVVT++ LI  FC      EA  +   M
Sbjct: 273 SYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVM 332

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+  S++ +++  CK G++D A   LE M+  G  P+   YNT++   C  G  
Sbjct: 333 KEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCA 392

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGY--CKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           + A ++F  ++ +GC   V +Y+ + +    C NK    AL + SEM+ KGI PD + YN
Sbjct: 393 DLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNK--IKALEMISEMIRKGIDPDEITYN 450

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L   L     V+ A  L  +M+         ++   + G+CK   + E +EL  T+   
Sbjct: 451 SLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEK 510

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR-GVLIAD 339
               +  +Y  LI+G+  +G    A EL  SL R GV+  D
Sbjct: 511 GCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGD 551



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/328 (25%), Positives = 146/328 (44%), Gaps = 36/328 (10%)

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
           C+ G  +++      +  +   P+VV    LI GF  + +  +A  + +E+++    P+V
Sbjct: 73  CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRV-MEILETYGDPDV 131

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
            S+N +++   K  ++D A+++ + M   G  P+   YN ++   C  G++  A E+   
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           +   GCK +V +Y+ILI        I  AL L+ E++S+G++PD+  YN +  G+ +   
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251

Query: 251 VERAFKLFDEMQRHGVAADTWAY----RTF------------------------------ 276
            +RA      +   G   D  +Y    R+F                              
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSI 311

Query: 277 -IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I   C+ G + EAV +   ++      D  +Y+ LI   CK GRL +A E    +    
Sbjct: 312 LISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDG 371

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLF 363
            + D+V YN ++  LC  G  D A D+F
Sbjct: 372 CLPDIVNYNTILATLCKFGCADLALDVF 399



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 70/269 (26%), Positives = 132/269 (49%), Gaps = 1/269 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           L++  C A   NE+      ++ +G +P+VV    ++     +  + +A R++E++   G
Sbjct: 68  LLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG 127

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
             P+ + YN ++ GF    +++ A ++F  M S G   +V +Y+I+I   C   ++E A 
Sbjct: 128 -DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAF 186

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            +  E+L  G KP V+ Y  L        ++  A +LFDE+   G+  D + Y   I G+
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
           CK G    A++  R L       D+ +YN L+       R +    L + +       +V
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306

Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
           VT++I+I + C +G++ +A ++   M+ K
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEK 335


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  191 bits (486), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/351 (33%), Positives = 181/351 (51%), Gaps = 4/351 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            GC P+VF+Y  L+ GLC       A++L   MA    E G  C PN V+YTT+I G  K
Sbjct: 78  LGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMA----EDGDHCPPNVVSYTTVIHGFFK 133

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           E  V KA  LF +M D  I P+VVT NS+I G C     ++A+ +  +M D+ + P+  +
Sbjct: 134 EDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTT 193

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++    +G++ EA R+L+ M + G  PN   Y+ L+D  C  G    A E+  SM 
Sbjct: 194 YNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMI 253

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 NV +Y  L++GY    ++    +L   M+  G++PD  I+N       +  +++
Sbjct: 254 QSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLD 313

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A   F++M++ G+  D  +Y T IDGLCK G +  A+  F  +       DI  +  LI
Sbjct: 314 EAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLI 373

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            G    G+ + A ELF  +    +   VV +  MI  L  +GK+ +A+ LF
Sbjct: 374 HGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLF 424



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/349 (31%), Positives = 171/349 (48%), Gaps = 25/349 (7%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  TYN+L++G   +G    A+ + ++M+  +G+      PN VTY+ +ID LCK G  
Sbjct: 189 PDCTTYNSLVHGYLSSGQLKEAVRILKQMSR-HGQ-----PPNGVTYSMLIDCLCKFGGH 242

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+E+   M     NPNV TY  L+HG+    D  E   L   M+  GV+P+   FN+ 
Sbjct: 243 TEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQ 302

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    K G++DEA      M Q G+ P+   Y T++DG C  GR++ A   F  M   G 
Sbjct: 303 IYAYVKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGL 362

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++  ++ LI+G+    + E A  L+ EM+ +GI+P VV++ T+   LF+  +V  A  
Sbjct: 363 SPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKT 422

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL---------------FRTLR---- 297
           LFD M    V  +  +Y   I G    G + E ++L               F TL     
Sbjct: 423 LFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDML 482

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            +  + D+   N LID  C+ GR++    LFR +       D VT NI+
Sbjct: 483 SMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENII 531



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 137/257 (53%), Gaps = 22/257 (8%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+   +N  I    + G    A+  F +M     + G++  P+ ++Y T+IDGLCK 
Sbjct: 291 GVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKMR----QQGLM--PDIISYGTMIDGLCKI 344

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A   F +M D+ ++P++V + +LIHGF     W +A+ LF EMMD+G++P VV F
Sbjct: 345 GRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVF 404

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++++L K GK+ EA  L +LM    V+PN   YN ++ G+ L G+++   +L   M S
Sbjct: 405 TTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLS 464

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K N  +++ L++                +MLS G+KPDV   NTL     E  ++E 
Sbjct: 465 VGLKPNAVTFNTLLD----------------DMLSMGLKPDVATCNTLIDSCCEDGRIED 508

Query: 254 AFKLFDEMQRHGVAADT 270
              LF EM       DT
Sbjct: 509 VLTLFREMLSKAAKTDT 525



 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/347 (26%), Positives = 149/347 (42%), Gaps = 38/347 (10%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P TVTYT +I   C  G ++ A     ++    +  N +++  ++   C     ++A  +
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 118 FIEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG--VRPNAFVYNTLMDG 174
            I    + G  P+V S+ V++  LC   K +EA  L+ +M + G    PN   Y T++ G
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
           F     V +A  LF  M   G   +V + + +I+G CK + ++ A  +  +M  K I PD
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
              YN+L  G     Q++ A ++  +M RHG   +   Y   ID LCK G   EA E+  
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 295 TLRILKYELDIRAYNCLIDGLC-----------------------------------KSG 319
           ++   +   ++  Y  L+ G                                     K G
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           RL  A   F  + +  L+ D+++Y  MI  LC  G++D A   F  M
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQM 357



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/278 (28%), Positives = 134/278 (48%), Gaps = 3/278 (1%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + + P  VTY  LI   CY    N A     +++  G++ N +SF  I+  LC   +  +
Sbjct: 7   KKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSD 66

Query: 149 ASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYSI 205
           A  + +    ++G  P+ F Y  L+ G C   +   A +L   M   G  C  NV SY+ 
Sbjct: 67  AMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTT 126

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G+ K  E+  A +L+ EML +GI PDVV  N++  GL ++  +++A ++  +M    
Sbjct: 127 VIHGFFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKH 186

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D   Y + + G   +G + EAV + + +       +   Y+ LID LCK G    A 
Sbjct: 187 IMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAR 246

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           E+  S+ +     +V TY  ++H     G + +  +L 
Sbjct: 247 EILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLI 284


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPN+  YN LI+G C  G    AL +FE M +GN      C PN  TYT +I GLCK 
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHGLCKS 260

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A  LF +M +  + PNVVTY +LI G C       A  L   M   G+ PN  +F
Sbjct: 261 GKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTF 320

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +V+++ LCK  K++EA   L  +++ GV+ N  VY +L+DG C TG+++ A+EL   M S
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  SYS LI+G C+ K++  A  +  +M+ KGI+   V Y  +   L      E 
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEG 440

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             K+FD+M   G+  D   Y  F+   C+ G + +A  +   +       ++  YN LI 
Sbjct: 441 PKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIR 500

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G    G +  A+  F  +       +  +Y +++  +      D + D++
Sbjct: 501 GYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW 550



 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 183/370 (49%), Gaps = 10/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHT-IVALNLFEEMANGNGEFGVVCKPNT 60
           EA A+F+ +R   C P+   Y T+++GLC  G T    + L E M+NG        +PN 
Sbjct: 160 EAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNG-------FEPNI 212

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +IDG C  G ++ A ++F  M     +PNV TY  LIHG C +     A  LF  
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G++PNVV++  ++   C  G +  A RLL LM   G+ PN + ++ L+D  C   +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A+    S+   G K N   Y+ LI+G CK  +I+ A  L  +M+S+G  PD   Y++
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL    ++ +A  + ++M   G+ A    Y   ID L +        ++F  +    
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              DI  Y   +   C+ GR++ A  +  + + RGV   ++VTYN +I      G + +A
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF-PNLVTYNTLIRGYANLGLVSQA 511

Query: 360 RDLFLDMEAK 369
              F  M  K
Sbjct: 512 FSTFEVMVGK 521



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 182/369 (49%), Gaps = 12/369 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME+ A  M  R      N+ TY TLIN  C  G    A      + +          P++
Sbjct: 60  MESLASRMPAR------NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAG------LAPDS 107

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             YT+ + G C+ G +  A  +F+ M          TY +L+HG   A    EA  +F+ 
Sbjct: 108 YAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVG 167

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+   +  +++ LC+ G+ +EA  LLE  +  G  PN  VYN L+DG+C  G 
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++F  M+   C  NV +Y+ LI+G CK+ ++E A+ L+S M+  G++P+VV Y  
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      ++ AF+L   M+ +G+  + W +   ID LCK   + EA     +L    
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +++   Y  LIDGLCK+G++  A EL + +     + D  +Y+ +I  LC   K+ +A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 361 DLFLDMEAK 369
            +  DM  K
Sbjct: 408 LMLEDMMEK 416



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+ + + GC    FTY  L++GL   G    A+ +F  M   +      C P+T 
Sbjct: 125 HACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADS------CAPDTH 178

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ GLC+ G  ++A+ L  +       PN+V YN+LI G+C A +   A  +F  M
Sbjct: 179 VYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM 238

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PNV ++  +++ LCK+GK++ A  L   M++ G+ PN   Y  L+ G C  G +
Sbjct: 239 DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHL 298

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   ME+ G   N +++S+LI+  CK +++E A      ++ KG+K + V+Y +L
Sbjct: 299 QCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSL 358

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A +L  +M   G   D  +Y + IDGLC+   + +A  +   +     
Sbjct: 359 IDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     Y  +ID L +    +   ++F  +    +  D+VTY + + + C +G+M+ A  
Sbjct: 419 QASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAES 478

Query: 362 LFLDM 366
           + + M
Sbjct: 479 MIVQM 483



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 170/355 (47%), Gaps = 6/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + Y + + G CR G    A  +F  M          C     TYT ++ GL   
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG------CLRTAFTYTALLHGLLGA 155

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  +F+ M+ ++  P+   Y +++HG C A    EA+ L  E M  G +PN+V +
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C  G+M+ A ++ E M      PN   Y  L+ G C +G+V RA  LF  M  
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE 275

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV +Y+ LI G C    ++ A  L   M + G+ P+   ++ L   L +  +VE 
Sbjct: 276 AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEE 335

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A      + + GV  +   Y + IDGLCK G I  A EL + +    +  D  +Y+ LID
Sbjct: 336 AQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLID 395

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           GLC+  +L  A  +   +    + A  VTY I+I  L  +   +  + +F  M A
Sbjct: 396 GLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 38/220 (17%)

Query: 185 EELFVSMESMGCK---HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD------- 234
             +F  MES+  +    N+ +Y+ LIN YC   +I  A    + +L  G+ PD       
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 235 ----------------------------VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                          Y  L  GL     V  A  +F  M+    
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSC 173

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A DT  Y T + GLC+ G   EA  L        +E +I  YN LIDG C +G ++ A +
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +F  +       +V TY  +IH LC  GK+++A  LF  M
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273



 Score = 52.4 bits (124), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 9/153 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++ +++   G  PN+ TYNTLI G    G    A + FE M  G G      KPN  
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV-GKG-----WKPNED 528

Query: 62  TYTTIIDGLCKEGFVDKAKELF--LKMKD-ENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +YT ++  + K+   D + +++    MKD +  N + + +  LI+G        E   L 
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKGSVAEFSSLL 588

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
             M + G QP+     +I  E+    ++ E +R
Sbjct: 589 SVMKEHGYQPSNTINAMITGEITVTNEVQEIAR 621



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 4/136 (2%)

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P +   NTL + L       R F   + +     A +   Y T I+  C  G I  A + 
Sbjct: 39  PPLRCLNTLLMALAR----HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQH 94

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
             +L       D  AY   + G C++G L  A  +F  +P    +    TY  ++H L  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 353 DGKMDKARDLFLDMEA 368
            G + +A  +F+ M A
Sbjct: 155 AGMVREAMAVFVGMRA 170


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 182/362 (50%), Gaps = 32/362 (8%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV+T+ TLI+GLC+ G T  A  LF ++   +G      KPN  TYT +I+G CKE
Sbjct: 324 GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY-----KPNVHTYTAMINGYCKE 378

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A+ L  +M+++ + PN  TY +LI G C   ++  A  L   M  +G  PN+ ++
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTY 438

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++ LCK G +DEA RLL  +   G++ +   Y  LM   C     NR+   F  M  
Sbjct: 439 NAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLK 498

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   ++ SY+ LI+ +C+ K+++ +  L+ E +S G+ P    Y ++  G         
Sbjct: 499 VGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSL 558

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KLF  M  HG A D+  Y   I GLCK   + +A  L               Y+ ++D
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL---------------YDAMMD 603

Query: 314 -GL--CKSGRLKIAWELFRSLPRGVLI---------ADVVTYNIMIHALCADGKMDKARD 361
            GL  C+  RL +A+E  +       I           + T N ++  LC++GK+D A  
Sbjct: 604 KGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAAL 663

Query: 362 LF 363
            F
Sbjct: 664 FF 665



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 187/403 (46%), Gaps = 42/403 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F+++   G  P+  ++  ++   C  G  + A    E   N   E G +   +  T
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA----ERWLNAMVERGFIV--DNAT 261

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            T IID  C++G+V++    F KM +  + PNV+ + +LI+G C      +A  L  EM+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G +PNV +   +++ LCK G  ++A RL L+L+   G +PN   Y  +++G+C   ++
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           NRAE L   M+  G   N  +Y+ LI+G+CK      A  L   M  +G  P++  YN +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA--------------------------------- 268
             GL +   ++ A++L +++  HG+ A                                 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 269 --DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D  +Y T I   C+   + E+  LF     L      + Y  +I G C+ G   +A +
Sbjct: 502 TPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF+ +       D +TY  +I  LC + K+D AR+L+  M  K
Sbjct: 562 LFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/330 (30%), Positives = 165/330 (50%), Gaps = 7/330 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A+N+  EM N     G+V  P+T T   ++D     G V+ A+ +F++M    ++P+ V+
Sbjct: 173 AVNMVVEMQNQ----GLV--PSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +  ++   C      EA+     M+++G   +  +  +I++  C+ G ++        M+
Sbjct: 227 FKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G+ PN   +  L++G C  G + +A EL   M   G K NV++++ LI+G CK    E
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 218 GALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A  L+ +++ S G KP+V  Y  +  G  +  ++ RA  L   MQ  G+  +T  Y T 
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           IDG CK G  V A EL   +    +  +I  YN +IDGLCK G L  A+ L   +    L
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
            AD VTY I++   C     +++   F  M
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKM 496



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 134/270 (49%), Gaps = 2/270 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           ++  F       EA  + +EM +QG+ P+  + N +++     G ++ A  +   M Q G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V P+   +  ++   C  GRV  AE    +M   G   +  + +++I+ +C+   +   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             + +M+  G+ P+V+ +  L  GL +   +++AF+L +EM R G   + + + T IDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 281 CKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G+  +A  LF + +R   Y+ ++  Y  +I+G CK  +L  A  L   +    L+ +
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             TY  +I   C  G   +A +L +D+  K
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYEL-MDLMGK 428



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 84/150 (56%), Gaps = 11/150 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  LF +    G  P   TY ++I G CR G+T +A+ LF+ M+N        C P+++
Sbjct: 523 ESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG------CAPDSI 576

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCKE  +D A+ L+  M D+ ++P  VT  +L + +C  +D + A    I +
Sbjct: 577 TYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTA----INV 632

Query: 122 MDQGVQPN-VVSFNVIMNELCKNGKMDEAS 150
           +D+  +   + + N ++ +LC  GK+D A+
Sbjct: 633 LDRLEKRQWIRTVNTLVRKLCSEGKLDMAA 662



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 111/234 (47%), Gaps = 11/234 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+ V G + +  TY  L++  CR   T  +L  F +M        V   P+  
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM------LKVGFTPDIH 506

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YTT+I   C++  + +++ LF +     + P   TY S+I G+C   + + A  LF  M
Sbjct: 507 SYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P+ +++  +++ LCK  K+D+A  L + M+  G+ P      TL   +C     
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDS 626

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           + A  +   +E    +  + + + L+   C   +++ A   + ++L K  +P+V
Sbjct: 627 STAINVLDRLEK---RQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK--EPNV 675



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 9/152 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   GC P+  TY  LI+GLC+      A NL++ M +          P  VT
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG------LSPCEVT 612

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T+    CK+     A  +  +++       + T N+L+   C     + A   F +++
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLL 669

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           D+    N V+    MN+  ++ K    S L E
Sbjct: 670 DKEPNVNRVTLLGFMNKCYESNKYGLVSELSE 701


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/366 (31%), Positives = 187/366 (51%), Gaps = 17/366 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + +A L  ++R +G  P+    N +++ L        A+ LF+ + + N     VC    
Sbjct: 217 LPSAPLLRRVRQYGISPSPEACNAVLSRLPLDE----AIELFQGLPDKN-----VC---- 263

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++  LC  G V+ A++LF +M      P+VVTY  LIHG+C   +   A  L  +
Sbjct: 264 -SYNILLKVLCGAGRVEDARQLFDEMASP---PDVVTYGILIHGYCALGELENAVKLLDD 319

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +GV+PN   +  ++  LC  G++ +A  ++E M+   V  +  VY T++ GFC  G 
Sbjct: 320 MVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGD 379

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A   F  M+  G   +  +Y+ LING C+  E++ A  +  EML++ +  D V Y  
Sbjct: 380 LVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTV 439

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  ++  AF++ + M + GVA +   Y    DGLCK G +  A EL   +    
Sbjct: 440 LVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKG 499

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            EL+   YN LI+GLCK+G L  A      +    L  DV TY  +I ALC  G++D+A 
Sbjct: 500 LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAH 559

Query: 361 DLFLDM 366
           DL  +M
Sbjct: 560 DLLQEM 565



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 179/362 (49%), Gaps = 13/362 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF  L     + NV +YN L+  LC  G    A  LF+EMA+          P+ V
Sbjct: 249 EAIELFQGLP----DKNVCSYNILLKVLCGAGRVEDARQLFDEMAS---------PPDVV 295

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G C  G ++ A +L   M    + PN   Y S++   C     ++A  +  +M
Sbjct: 296 TYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDM 355

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +   V  +   +  +++  C  G +  A R  + M + G+  +   Y TL++G C  G +
Sbjct: 356 VHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGEL 415

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE++   M +     +  +Y++L++GYCK  ++  A  +++ M+ +G+ P+VV Y  L
Sbjct: 416 KEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL 475

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   V+ A +L  EM   G+  +   Y + I+GLCK GY+ +A+     +     
Sbjct: 476 SDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGL 535

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  Y  LID LCKSG L  A +L + +    +   +VTYN++++  C  G+++  + 
Sbjct: 536 KPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKK 595

Query: 362 LF 363
           L 
Sbjct: 596 LL 597



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/345 (31%), Positives = 174/345 (50%), Gaps = 6/345 (1%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y T+++G C  G  + A   F+EM       G+    + VTYTT+I+GLC+ G + +A++
Sbjct: 367 YTTVLSGFCNKGDLVSARRWFDEMQRK----GLAT--DGVTYTTLINGLCRAGELKEAEK 420

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +  +M    ++ + VTY  L+ G+C      EA  +   M+ +GV PNVV++  + + LC
Sbjct: 421 VLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLC 480

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G +  A+ LL  M   G+  NA  YN+L++G C  G +++A      M++ G K +V+
Sbjct: 481 KQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVY 540

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+  CK+ E++ A  L  EML  GIKP +V YN L  G     +VE   KL + M
Sbjct: 541 TYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWM 600

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
               +  +   Y + +   C    +    E+++ +     E +   YN LI G CK+  +
Sbjct: 601 LEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSM 660

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           K A      +          +Y+ +I  L    K  +AR LF DM
Sbjct: 661 KEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDM 705



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 169/347 (48%), Gaps = 6/347 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A   F +++  G   +  TY TLINGLCR G    A  + +EM             + 
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEM------LARRLDVDE 434

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT ++DG CK G + +A ++   M    + PNVVTY +L  G C   D   A  L  E
Sbjct: 435 VTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHE 494

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M ++G++ N  ++N ++N LCK G +D+A R +  M   G++P+ + Y TL+D  C +G 
Sbjct: 495 MSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGE 554

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++RA +L   M   G K  + +Y++L+NG+C +  +EG   L   ML K I P+   YN+
Sbjct: 555 LDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNS 614

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L       + ++   +++  M    V  +   Y   I G CK   + EA      +    
Sbjct: 615 LMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKG 674

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           + L   +Y+ LI  L K  +   A +LF  + +    A+   YN  I
Sbjct: 675 FRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 8/351 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           P+V TY  LI+G C  G    A+ L ++M A G        +PN   YT+++  LC +G 
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARG-------VEPNATVYTSVVALLCDKGR 344

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           V  A  +   M    +  +   Y +++ GFC   D   A+  F EM  +G+  + V++  
Sbjct: 345 VSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTT 404

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N LC+ G++ EA ++L+ M+   +  +   Y  L+DG+C  G++  A ++  +M   G
Sbjct: 405 LINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRG 464

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +Y+ L +G CK  +++ A  L  EM +KG++ +   YN+L  GL +   +++A 
Sbjct: 465 VAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM 524

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +   +M   G+  D + Y T ID LCK+G +  A +L + +     +  I  YN L++G 
Sbjct: 525 RTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGF 584

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C SGR++   +L   +    +  +  TYN ++   C    M    +++  M
Sbjct: 585 CMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGM 635



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 150/293 (51%), Gaps = 7/293 (2%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A ELF  + D+N    V +YN L+   C A    +A+ LF EM      P+VV++ +
Sbjct: 247 LDEAIELFQGLPDKN----VCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGI 299

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++  C  G+++ A +LL+ M+  GV PNA VY +++   C  GRV+ A  +   M    
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +   Y+ +++G+C   ++  A   + EM  KG+  D V Y TL  GL    +++ A 
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           K+  EM    +  D   Y   +DG CK G + EA ++  T+       ++  Y  L DGL
Sbjct: 420 KVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGL 479

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           CK G ++ A EL   +    L  +  TYN +I+ LC  G +D+A     DM+A
Sbjct: 480 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDA 532



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 83/259 (32%), Positives = 123/259 (47%), Gaps = 6/259 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G E N  TYN+LINGLC+ G+   A+    +M           KP+  T
Sbjct: 488 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAG------LKPDVYT 541

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YTT+ID LCK G +D+A +L  +M D  I P +VTYN L++GFC +      K L   M+
Sbjct: 542 YTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWML 601

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++ + PN  ++N +M + C    M   + + + M    V PN   YN L+ G C    + 
Sbjct: 602 EKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMK 661

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+     M   G +    SYS LI    K K+   A  L+ +M  +G   +  +YN   
Sbjct: 662 EAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721

Query: 243 IGLFEIHQVERAFKLFDEM 261
              F    +E    L DE+
Sbjct: 722 DFNFNEDNLEATLALCDEL 740



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 147/291 (50%), Gaps = 11/291 (3%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           +  L  +++   I+P+    N+++         +EA  LF  + D+    NV S+N+++ 
Sbjct: 219 SAPLLRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDK----NVCSYNILLK 270

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
            LC  G++++A +L +   ++   P+   Y  L+ G+C  G +  A +L   M + G + 
Sbjct: 271 VLCGAGRVEDARQLFD---EMASPPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEP 327

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           N   Y+ ++   C    +  AL++  +M+   +  D  +Y T+  G      +  A + F
Sbjct: 328 NATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWF 387

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
           DEMQR G+A D   Y T I+GLC+ G + EA ++ + +   + ++D   Y  L+DG CK 
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKR 447

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G++  A+++  ++ +  +  +VVTY  +   LC  G +  A +L  +M  K
Sbjct: 448 GKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNK 498


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 196/358 (54%), Gaps = 6/358 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           ++ +++V G   + +T + +++GLCR      A+  F++      EF    +P+ V++ T
Sbjct: 233 VYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGK--EF----QPSVVSFNT 286

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           I+   CK GFVD AK  F  M    + P+  +YN LIHG C A    EA  L  +M + G
Sbjct: 287 IMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHG 346

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++P++V++N++       G ++ A  +++ M+  G  PN   Y  L+ G C  G V  A 
Sbjct: 347 LEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEAL 406

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L+  M S G + ++ S ++L+   CK+++++ A  L+ EM + G++PD++ Y+TL  GL
Sbjct: 407 KLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGL 466

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +V++A  L+++M  + +  ++  +   + GLC+ G I +A   F  L      LDI
Sbjct: 467 CKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDI 526

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             YN +IDG  K G  + A +L++ L    +   +VT+N +++  C + K+ +AR L 
Sbjct: 527 ILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 188/361 (52%), Gaps = 6/361 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G  P++ TY+TLI+GLC+ G    A+ L+E+M +          PN++ 
Sbjct: 440 AFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNR------IIPNSLI 493

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  I+ GLC++G + +A+  F  +   N++ +++ YN +I G+    +  EA  L+ ++ 
Sbjct: 494 HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLG 553

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G+ P +V+FN +M   C N K+ +A RLL+ +   G+ PNA  Y TLM+ +C  G + 
Sbjct: 554 EKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQ 613

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              EL   M++        +Y+++I G CK  +++ +  L  +M + G+ PD V YNT+ 
Sbjct: 614 SLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTII 673

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +   + +AF+L+D+M  H +   +  Y   I+G C  G + +A  L  +L+  K  
Sbjct: 674 QAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVN 733

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           L+  AY  +I   C  G +  A   FR +        +  Y+ +I  LC    + +A+  
Sbjct: 734 LNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYF 793

Query: 363 F 363
           F
Sbjct: 794 F 794



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 192/369 (52%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  L+ ++   G + ++ +   L+  LC++    VA  LF EM ANG        +P+ 
Sbjct: 404 EALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANG-------LRPDL 456

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY+T+I GLCK+G V +A  L+ KM    I PN + + +++ G C     ++A+  F  
Sbjct: 457 ITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDY 516

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++   +  +++ +N++++   K G   EA +L + + + G+ P    +N+LM GFC+  +
Sbjct: 517 LITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRK 576

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A  L  +++  G + N  +Y+ L+N YC+   ++  L L SEM +K I P  + Y  
Sbjct: 577 LSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +++ + +L ++M   G+  D  +Y T I   CK   + +A +L+  + +  
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E     YN LI+G C  G LK A  L  SL    +  +   Y  +I A CA G +DKA 
Sbjct: 697 LEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAV 756

Query: 361 DLFLDMEAK 369
             F  M  K
Sbjct: 757 VYFRQMVEK 765



 Score =  174 bits (440), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/399 (30%), Positives = 187/399 (46%), Gaps = 41/399 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A + F  +   G  P+ ++YN LI+GLC  G    AL+L  +M N   E      P+ VT
Sbjct: 300 AKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLE------PDMVT 353

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +  G    G ++ A  +  KM  +  NPN+VTY  LI G C   +  EA  L+ EM+
Sbjct: 354 YNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMI 413

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G Q +++S  V++  LCK+ ++D A +L   M   G+RP+   Y+TL+ G C  G V 
Sbjct: 414 SHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQ 473

Query: 183 RAEELFVSMES--------------MG-CKHNVFS--------------------YSILI 207
           +A  L+  M S              MG C+    S                    Y+I+I
Sbjct: 474 QAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMI 533

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           +GY K      A+ LY ++  KGI P +V +N+L  G     ++ +A +L D ++ HG+ 
Sbjct: 534 DGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLE 593

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            +   Y T ++  C+ G +   +EL   ++          Y  +I GLCK  +L+ + +L
Sbjct: 594 PNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQL 653

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              +    L  D V+YN +I A C    M KA  L+  M
Sbjct: 654 LEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKM 692



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/324 (29%), Positives = 155/324 (47%), Gaps = 32/324 (9%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIH---------------------------- 103
           +   V  A  + +KMKD N   ++ TYNSL++                            
Sbjct: 191 RSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSGTPQSEYTSS 250

Query: 104 ----GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
               G C  + + +A   F +   +  QP+VVSFN IM+  CK G +D A     +M++ 
Sbjct: 251 IVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKH 310

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G+ P+A+ YN L+ G C+ G +  A +L   ME+ G + ++ +Y+IL  G+     I GA
Sbjct: 311 GLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGA 370

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
            ++  +ML KG  P++V Y  L  G  +I  VE A KL+ EM  HG      +    +  
Sbjct: 371 WNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGS 430

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           LCK+  +  A +LF  +       D+  Y+ LI GLCK G ++ A  L+  +    +I +
Sbjct: 431 LCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPN 490

Query: 340 VVTYNIMIHALCADGKMDKARDLF 363
            + +  ++  LC  GK+ +AR  F
Sbjct: 491 SLIHGAILMGLCEKGKISQARMYF 514



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 132/273 (48%), Gaps = 13/273 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A  L   +++ G EPN  TY TL+N  C  G+    L L  EM A   G       P  
Sbjct: 579 QARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIG-------PTH 631

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TYT +I GLCK+  + ++ +L   M    + P+ V+YN++I  FC A D  +A  L+ +
Sbjct: 632 ITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDK 691

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+   ++P  V++N+++N  C  G + +A  LL  +    V  N + Y T++   C  G 
Sbjct: 692 MLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGD 751

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V++A   F  M   G + ++  YS +I   CK   +  A   +  MLS G+ PD  ++  
Sbjct: 752 VDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEV 811

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           L     +   +   F+L  EM + G     W Y
Sbjct: 812 LLNAFHQCGHLNSEFELLAEMIKSG-----WLY 839



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 10/294 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ +L   G  P + T+N+L+ G C       A  L + +     E      PN V
Sbjct: 544 EAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLE------PNAV 597

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN-EAKCLFIE 120
           TYTT+++  C+EG +    EL  +MK + I P  +TY  +I G C    W  +  C  +E
Sbjct: 598 TYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLC--KQWKLQESCQLLE 655

Query: 121 MMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            MD  G+ P+ VS+N I+   CK   M +A +L + M+   + P +  YN L++GFC+ G
Sbjct: 656 DMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYG 715

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            +  A+ L VS+++     N ++Y+ +I  +C   +++ A+  + +M+ KG +  +  Y+
Sbjct: 716 DLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYS 775

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            +   L +   V  A   F  M   GV  D   +   ++   + G++    EL 
Sbjct: 776 AVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELL 829


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 187/365 (51%), Gaps = 6/365 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
            L  ++   G +PNV+T+   I  L R G    A  + + M +        C P+ VTYT
Sbjct: 246 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGPDVVTYT 299

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +ID LC    +D AKE+F KMK     P+ VTY +L+  F    D +     + EM   
Sbjct: 300 VLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKD 359

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  P+VV+F ++++ LCK G   EA   L++M   G+ PN   YNTL+ G     R++ A
Sbjct: 360 GHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 419

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            E+F +MES+G K   ++Y + I+ Y K+ +   AL  + +M +KGI P++V  N     
Sbjct: 420 LEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 479

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  +   A ++F  ++  G+  D+  Y   +    K G I EA++L   +     E D
Sbjct: 480 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPD 539

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +   N LI+ L K+ R+  AW++F  +    L   VVTYN ++  L  +GK+ +A +LF 
Sbjct: 540 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 599

Query: 365 DMEAK 369
            M  K
Sbjct: 600 GMVQK 604



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/326 (34%), Positives = 174/326 (53%), Gaps = 7/326 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA A    +R  G  PN+ TYNTLI GL R      AL +F+ M +     GV  KP   
Sbjct: 383 EAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMES----LGV--KPTAY 436

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY   ID   K G    A E F KMK + I PN+V  N+ ++    A    EAK +F  +
Sbjct: 437 TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGL 496

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+ V++N++M    K G++DEA +LL  M++    P+  V N+L++      RV
Sbjct: 497 KDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRV 556

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F+ M+ M  K  V +Y+ L+ G  KN +I+ A+ L+  M+ KG  P+ + +NTL
Sbjct: 557 DEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
           F  L +  +V  A K+  +M   G   D + Y T I GL KNG + EA+  F  ++ L Y
Sbjct: 617 FDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVY 676

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWEL 327
             D      L+ G+ K+G ++ A+++
Sbjct: 677 P-DFVTLCTLLPGVVKAGLIEDAYKI 701



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/344 (29%), Positives = 181/344 (52%), Gaps = 9/344 (2%)

Query: 3    AAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF K  +  G +P + TYN LI GL       +A ++F ++ N        C P+  
Sbjct: 770  ARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTG------CIPDVA 823

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY  ++D   K G +D+  E++ +M      PN +T+N +I G   A + ++A  L+ ++
Sbjct: 824  TYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDL 883

Query: 122  M-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M D+   P   ++  +++ L K+G++ EA +L E M   G RPN  +YN L++GF   G 
Sbjct: 884  MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGE 943

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             + A  LF  M   G + ++ +YS+L++  C    ++  L  + E+   G+ PDVV YN 
Sbjct: 944  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNL 1003

Query: 241  LFIGLFEIHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            +  GL + H++E A  LF+EM++  G+  D + Y + I  L   G + EA +++  ++  
Sbjct: 1004 IINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063

Query: 300  KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
              E ++  +N LI G   SG+ + A+ +++++  G    +  TY
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1107



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 193/402 (48%), Gaps = 43/402 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   GC P+V TY  LI+ LC       A  +F +M  G        KP+ V
Sbjct: 278 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRH------KPDRV 331

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D       +D   + + +M+ +   P+VVT+  L+   C A ++ EA      M
Sbjct: 332 TYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVM 391

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD-------- 173
            DQG+ PN+ ++N ++  L +  ++D+A  + + M  +GV+P A+ Y   +D        
Sbjct: 392 RDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDS 451

Query: 174 ---------------------------GFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                           GR   A+++F  ++ +G   +  +Y+++
Sbjct: 452 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 511

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +  Y K  EI+ A+ L SEM+    +PDV++ N+L   L++  +V+ A+K+F  M+   +
Sbjct: 512 MKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 571

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
                 Y T + GL KNG I EA+ELF  +       +   +N L D LCK+  + +A +
Sbjct: 572 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 631

Query: 327 -LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            LF+ +  G  + DV TYN +I  L  +G++ +A   F  M+
Sbjct: 632 MLFKMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 672



 Score =  166 bits (419), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A     K+R FG   N ++YN LI+ L ++     A+ ++  M           +P+  
Sbjct: 173 QAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDG------FRPSLQ 226

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY++++ GL K   ++    L  +M+   + PNV T+   I     A   NEA  +   M
Sbjct: 227 TYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 286

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+G  P+VV++ V+++ LC   K+D A  +   M     +P+   Y TL+D F     +
Sbjct: 287 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDL 346

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +   + +  ME  G   +V +++IL++  CK      A +    M  +GI P++  YNTL
Sbjct: 347 DSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTL 406

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  +H+++ A ++FD M+  GV    + Y  FID   K+G  V A+E F  ++    
Sbjct: 407 ICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 466

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I A N  +  L K+GR + A ++F  L    L+ D VTYN+M+      G++D+A  
Sbjct: 467 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 526

Query: 362 LFLDM 366
           L  +M
Sbjct: 527 LLSEM 531



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 185/364 (50%), Gaps = 22/364 (6%)

Query: 20   FTYNTLINGLCRTGHTIV---------------ALNLFEEMANGNGEFGVVCKPNTVTYT 64
            F+   + NG+CR G +I+               A  LFE+      + GV  +P   TY 
Sbjct: 737  FSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTK---DLGV--QPKLPTYN 791

Query: 65   TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
             +I GL +   ++ A+++FL++K+    P+V TYN L+  +  +   +E   ++ EM   
Sbjct: 792  LLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAH 851

Query: 125  GVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
              +PN ++ N++++ L K G +D+A  L  +LM      P A  Y  L+DG   +GR+  
Sbjct: 852  ECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 911

Query: 184  AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
            A++LF  M   GC+ N   Y+ILING+ K  E + A +L+  M+ +G++PD+  Y+ L  
Sbjct: 912  AKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 971

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-YE 302
             L  + +V+     F E++  G+  D   Y   I+GL K   + EA+ LF  ++  +   
Sbjct: 972  CLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGIT 1031

Query: 303  LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             D+  YN LI  L  +G ++ A +++  + R  L  +V T+N +I      GK + A  +
Sbjct: 1032 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1091

Query: 363  FLDM 366
            +  M
Sbjct: 1092 YQTM 1095



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 198/439 (45%), Gaps = 79/439 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +FM+++    +P V TYNTL+ GL + G    A+ LFE M          C PNT+
Sbjct: 558 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG------CPPNTI 611

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+ D LCK   V  A ++  KM D    P+V TYN++I G        EA C F +M
Sbjct: 612 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 671

Query: 122 MD-------------QGV----------------------QP------------------ 128
                           GV                      QP                  
Sbjct: 672 KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGI 731

Query: 129 -NVVSFN--VIMNELCKNG------------KMDEAS--RLL--ELMIQIGVRPNAFVYN 169
            N VSF+  ++ N +C++G            K + AS  R+L  +    +GV+P    YN
Sbjct: 732 DNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYN 791

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            L+ G      +  A+++F+ +++ GC  +V +Y+ L++ Y K+ +I+    +Y EM + 
Sbjct: 792 LLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAH 851

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLF-DEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
             +P+ + +N +  GL +   V+ A  L+ D M     +     Y   IDGL K+G + E
Sbjct: 852 ECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 911

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A +LF  +       +   YN LI+G  K+G    A  LF+ + +  +  D+ TY++++ 
Sbjct: 912 AKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 971

Query: 349 ALCADGKMDKARDLFLDME 367
            LC  G++D+    F +++
Sbjct: 972 CLCMVGRVDEGLHYFRELK 990



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 196/406 (48%), Gaps = 45/406 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + A   F K++  G  PN+   N  +  L + G    A  +F     G  + G+V  P++
Sbjct: 452 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY----GLKDIGLV--PDS 505

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  ++    K G +D+A +L  +M +    P+V+  NSLI+    A+  +EA  +F+ 
Sbjct: 506 VTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMR 565

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M +  ++P VV++N ++  L KNGK+ EA  L E M+Q G  PN   +NTL D  C    
Sbjct: 566 MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDE 625

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A ++   M  MGC  +VF+Y+ +I G  KN +++ A+  + +M  K + PD V   T
Sbjct: 626 VTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCT 684

Query: 241 LFIGLFEIHQVERAFK---------------LFDEMQRHGVAAD-------TWAYRTFID 278
           L  G+ +   +E A+K               LF E     + A+       +++ R   +
Sbjct: 685 LLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVAN 744

Query: 279 GLCKNGYIV---------------EAVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLK 322
           G+C++G  +                A  LF    + L  +  +  YN LI GL ++  ++
Sbjct: 745 GICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIE 804

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           IA ++F  +     I DV TYN ++ A    GK+D+  +++ +M A
Sbjct: 805 IAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSA 850



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 172/346 (49%), Gaps = 7/346 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V T+  L++ LC+ G+   A    + M +     G++  PN  TY T+I GL + 
Sbjct: 360 GHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQ----GIL--PNLHTYNTLICGLLRV 413

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +D A E+F  M+   + P   TY   I  +  + D   A   F +M  +G+ PN+V+ 
Sbjct: 414 HRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 473

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  +  L K G+  EA ++   +  IG+ P++  YN +M  +   G ++ A +L   M  
Sbjct: 474 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVE 533

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             C+ +V   + LIN   K   ++ A  ++  M    +KP VV YNTL  GL +  +++ 
Sbjct: 534 NCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 593

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LF+ M + G   +T  + T  D LCKN  +  A+++   +  +    D+  YN +I 
Sbjct: 594 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 653

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           GL K+G++K A   F  + + ++  D VT   ++  +   G ++ A
Sbjct: 654 GLVKNGQVKEAMCFFHQMKK-LVYPDFVTLCTLLPGVVKAGLIEDA 698



 Score =  142 bits (358), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 190/404 (47%), Gaps = 46/404 (11%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  +  K+   GC P+VFTYNT+I GL + G    A+  F +M         +  P+ VT
Sbjct: 629  ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-------LVYPDFVT 681

Query: 63   YTTIIDGLCKEGFVDKAKELFLKM----KDENIN----------------PNVVTYNS-- 100
              T++ G+ K G ++ A ++         D+  N                 N V+++   
Sbjct: 682  LCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERL 741

Query: 101  LIHGFC------------YA---NDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNG 144
            + +G C            Y+   N+ + A+ LF +   D GVQP + ++N+++  L +  
Sbjct: 742  VANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 801

Query: 145  KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
             ++ A  +   +   G  P+   YN L+D +  +G+++   E++  M +  C+ N  +++
Sbjct: 802  MIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHN 861

Query: 205  ILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
            I+I+G  K   ++ AL LY +++S +   P    Y  L  GL +  ++  A +LF+ M  
Sbjct: 862  IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSD 921

Query: 264  HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            +G   +   Y   I+G  K G    A  LF+ +       D++ Y+ L+D LC  GR+  
Sbjct: 922  YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 981

Query: 324  AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                FR L    L  DVV YN++I+ L    ++++A  LF +M+
Sbjct: 982  GLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMK 1025



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 16   EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
             P   TY  LI+GL ++G    A  LFE M+    ++G  C+PN   Y  +I+G  K G 
Sbjct: 890  SPTACTYGPLIDGLSKSGRLYEAKQLFEGMS----DYG--CRPNCAIYNILINGFGKAGE 943

Query: 76   VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
             D A  LF +M  E + P++ TY+ L+   C     +E    F E+ + G+ P+VV +N+
Sbjct: 944  ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNL 1003

Query: 136  IMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            I+N L K  +++EA  L  E+    G+ P+ + YN+L+    + G V  A +++  ++  
Sbjct: 1004 IINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063

Query: 195  GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            G + NVF+++ LI GY  + + E A ++Y  M++ G  P+   Y  L
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/208 (33%), Positives = 112/208 (53%), Gaps = 7/208 (3%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  LF  +  +GC PN   YN LING  + G    A  LF+ M       GV  +P+  
Sbjct: 911  EAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE----GV--RPDLK 964

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            TY+ ++D LC  G VD+    F ++K+  +NP+VV YN +I+G    +   EA  LF EM
Sbjct: 965  TYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEM 1024

Query: 122  M-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
               +G+ P++ ++N ++  L   G ++EA ++   + + G+ PN F +N L+ G+ L+G+
Sbjct: 1025 KKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1084

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILIN 208
               A  ++ +M + G   N  +Y  L N
Sbjct: 1085 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1112



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 139/310 (44%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            T T   +++ L  +G +++   +F  M+   I  +  TY ++           +A    
Sbjct: 119 TTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFAL 178

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M + G   N  S+N +++ L K+    EA  +   MI  G RP+   Y++LM G    
Sbjct: 179 RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKR 238

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
             +     L   ME++G K NV++++I I    +  +I  A  +   M  +G  PDVV Y
Sbjct: 239 RDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTY 298

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L   L    +++ A ++F +M+      D   Y T +D    N  +    + +  +  
Sbjct: 299 TVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEK 358

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             +  D+  +  L+D LCK+G    A+     +    ++ ++ TYN +I  L    ++D 
Sbjct: 359 DGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 418

Query: 359 ARDLFLDMEA 368
           A ++F +ME+
Sbjct: 419 ALEIFDNMES 428



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/281 (23%), Positives = 121/281 (43%), Gaps = 7/281 (2%)

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
           + N+     T N ++          E   +F  M  + ++ +  ++  I   L   G + 
Sbjct: 113 NSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLR 172

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A   L  M + G   NA+ YN L+     +     A E++  M   G + ++ +YS L+
Sbjct: 173 QAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLM 232

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
            G  K ++IE  + L  EM + G+KP+V  +      L    ++  A+++   M   G  
Sbjct: 233 VGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCG 292

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   Y   ID LC    +  A E+F  ++  +++ D   Y  L+D    +  L    + 
Sbjct: 293 PDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQF 352

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADG-------KMDKARD 361
           +  + +   + DVVT+ I++ ALC  G       K+D  RD
Sbjct: 353 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRD 393


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 115/369 (31%), Positives = 195/369 (52%), Gaps = 10/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   + K+   G  P+VF  +T+I G  +      AL LF+E    + E G+    N  
Sbjct: 391 KALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE----SFETGLA---NVF 443

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
              TI+  LCK+G +DKA EL  KM+   I PNVV+YN+++   C   + + A+ +F  M
Sbjct: 444 ICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNM 503

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +++G++PN  +++++++   KN        ++  M    +  N  VY T+++G C  G+ 
Sbjct: 504 LEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQT 563

Query: 182 NRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++A EL  +M  E   C  +  SY+ +I+G+ K  E++ A++ Y EM + GI P+V+ Y 
Sbjct: 564 SKARELLANMIEEKRFCV-SCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYT 622

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L  GL + +++++A ++ DEM+  GV  D  AY   I G CK   +  A  LF  L   
Sbjct: 623 SLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEE 682

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                   YN LI G    G +  A +L++ + +  L  D+ TY  +I  L  +G +  A
Sbjct: 683 GLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILA 742

Query: 360 RDLFLDMEA 368
            DL+ +M+A
Sbjct: 743 SDLYTEMQA 751



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/366 (30%), Positives = 190/366 (51%), Gaps = 7/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K+   G  PNV +YN ++   CR  +  +A  +F  M     E G+  KPN  
Sbjct: 460 KATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNML----EKGL--KPNNY 513

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDG  K        E+  +M   NI  N V Y ++I+G C     ++A+ L   M
Sbjct: 514 TYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 573

Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +++     + +S+N I++   K G+MD A    E M   G+ PN   Y +LMDG C   R
Sbjct: 574 IEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNR 633

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A E+   M++ G K ++ +Y  LI+G+CK   +E A +L+SE+L +G+ P   +YN+
Sbjct: 634 MDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNS 693

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   +  +  A  L+ +M + G+  D   Y T IDGL K G ++ A +L+  ++ + 
Sbjct: 694 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVG 753

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D   Y  +++GL K G+     ++F  + +  +  +V+ YN +I     +G +D+A 
Sbjct: 754 LVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 813

Query: 361 DLFLDM 366
            L  +M
Sbjct: 814 RLHDEM 819



 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 198/403 (49%), Gaps = 40/403 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F +    G EP+   Y+  +   C+T +  +A +L  EM         +C P+  
Sbjct: 250 EALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKK-----LCVPSQE 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I    K+G ++ A     +M  + I+ NVV   SLI G C  ND   A  LF +M
Sbjct: 305 TYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKM 364

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP------------------ 163
            ++G  PN V+F+V++    KNG+M++A    + M  +G+ P                  
Sbjct: 365 ENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKH 424

Query: 164 ----------------NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
                           N F+ NT++   C  G++++A EL   MES G   NV SY+ ++
Sbjct: 425 EEALKLFDESFETGLANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVM 484

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
             +C+ K ++ A +++S ML KG+KP+   Y+ L  G F+ H  +   ++ ++M    + 
Sbjct: 485 LAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIE 544

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
            +   Y+T I+GLCK G   +A EL   +    ++ +   +YN +IDG  K G +  A  
Sbjct: 545 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVA 604

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  +    +  +V+TY  ++  LC + +MD+A ++  +M+ K
Sbjct: 605 AYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNK 647



 Score =  167 bits (424), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 174/348 (50%), Gaps = 7/348 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G +PN +TY+ LI+G  +       L +  +M + N E       N V 
Sbjct: 496 ARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEV------NGVV 549

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           Y TII+GLCK G   KA+EL   M +E     + ++YNS+I GF    + + A   + EM
Sbjct: 550 YQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEM 609

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PNV+++  +M+ LCKN +MD+A  + + M   GV+ +   Y  L+ GFC    +
Sbjct: 610 CANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNM 669

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  LF  +   G   +   Y+ LI+G+     +  AL LY +ML  G++ D+  Y TL
Sbjct: 670 ESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTL 729

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   +  A  L+ EMQ  G+  D   Y   ++GL K G  V+ V++F  ++    
Sbjct: 730 IDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 789

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
             ++  YN +I G  + G L  A+ L   +    ++ D  T++I++  
Sbjct: 790 TPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 837



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 43/274 (15%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDK 78
            +YN++I+G  + G    A+  +EEM ANG         PN +TYT+++DGLCK   +D+
Sbjct: 584 MSYNSIIDGFIKEGEMDYAVAAYEEMCANG-------ISPNVITYTSLMDGLCKNNRMDQ 636

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A E+  +MK++ +  ++  Y +LIHGFC  ++   A  LF E++++G+ P+   +N +++
Sbjct: 637 ALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLIS 696

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
                G M  A  L + M++ G+R +   Y TL+DG    G +  A +L+  M+++G   
Sbjct: 697 GFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLVP 756

Query: 199 NVFSYSILINGYCKNKE-----------------------------------IEGALSLY 223
           +   Y++++NG  K  +                                   ++ A  L+
Sbjct: 757 DEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLH 816

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            EML KGI PD   ++ L  G     Q  RA  L
Sbjct: 817 DEMLDKGILPDGATFDILVSGKVGKFQPIRAASL 850



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 164/373 (43%), Gaps = 43/373 (11%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           ++FG E N   +N L+N   +   T  A+++  +M     E GV+  P        +  L
Sbjct: 154 KLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQML----ELGVI--PFVPYVNRTLSAL 207

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            +   + +AKEL+ +M    ++ +  T   L+          EA  +F   +++G +P+ 
Sbjct: 208 VQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDS 267

Query: 131 VSFNVIMNELC------------------------------------KNGKMDEASRLLE 154
           + +++ +   C                                    K G M++A R  +
Sbjct: 268 LLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKD 327

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M+  G+  N     +L+ G C    +  A +LF  ME+ G   N  ++S+LI  + KN 
Sbjct: 328 EMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNG 387

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           E+E AL  Y +M S G+ P V   +T+  G  +  + E A KLFDE    G+ A+ +   
Sbjct: 388 EMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFICN 446

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           T +  LCK G I +A EL R +       ++ +YN ++   C+   + +A  +F ++   
Sbjct: 447 TILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEK 506

Query: 335 VLIADVVTYNIMI 347
            L  +  TY+I+I
Sbjct: 507 GLKPNNYTYSILI 519



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 130/313 (41%), Gaps = 39/313 (12%)

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N   +N L++ +      + A  +  +M++ GV P V   N  ++ L +   + EA  L 
Sbjct: 161 NSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELY 220

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             M+ IGV  +      LM       +   A E+F      G + +   YS+ +   CK 
Sbjct: 221 SRMVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKT 280

Query: 214 -------------KE-----------------------IEGALSLYSEMLSKGIKPDVVI 237
                        KE                       +E A+    EM+S GI  +VV 
Sbjct: 281 LNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVA 340

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             +L  G  + + +  A  LF +M+  G + ++  +   I+   KNG + +A+E ++ + 
Sbjct: 341 ATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKME 400

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKM 356
            L     +   + +I G  K  + + A +LF  S   G  +A+V   N ++  LC  GK+
Sbjct: 401 SLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG--LANVFICNTILSWLCKQGKI 458

Query: 357 DKARDLFLDMEAK 369
           DKA +L   ME++
Sbjct: 459 DKATELLRKMESR 471



 Score = 80.1 bits (196), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/273 (21%), Positives = 122/273 (44%), Gaps = 5/273 (1%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQ----GVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           LI     +N    A  L   ++D     G + N  +FN ++N   K+ + D A  ++  M
Sbjct: 129 LIRYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQM 188

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +++GV P     N  +        +  A+EL+  M ++G   +  +  +L+    + ++ 
Sbjct: 189 LELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLMRASLREEKP 248

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW-AYRT 275
             AL ++S  + +G +PD ++Y+       +   +  A  L  EM+   +   +   Y +
Sbjct: 249 AEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLCVPSQETYTS 308

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I    K G + +A+     +      +++ A   LI G CK+  L  A +LF  +    
Sbjct: 309 VILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMENEG 368

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              + VT++++I     +G+M+KA + +  ME+
Sbjct: 369 PSPNSVTFSVLIERFSKNGEMEKALEFYKKMES 401


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 179/356 (50%), Gaps = 5/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+++TYN L  GLC+ G    A  L +EM       G +  P+ VTY T+ D   K 
Sbjct: 304 GFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEME----RLGTLL-PDVVTYNTLADACFKC 358

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                A  L  +M+++ +   +VT+N +I G C   +   A     +M D G+ P+V+++
Sbjct: 359 RCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITY 418

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK G + +A  L++ M++ G++ + F  NT++   C   R   A+ L  S   
Sbjct: 419 NTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQ 478

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  SY  ++  Y K    E AL L+ EM+ K + P +  YNTL  GL  + +++ 
Sbjct: 479 RGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKE 538

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A    +E+   G+  D   Y   I   CK G +  A +    +    ++ D+   N L++
Sbjct: 539 AIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMN 598

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GLC +G+L  A +LF S        DV+TYN +I  +C DG +D A   F DMEA+
Sbjct: 599 GLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEAR 654



 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 188/390 (48%), Gaps = 44/390 (11%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F  +      PN +T+N L++  C  G    AL+    M      FG+   P+ VTY T+
Sbjct: 192 FRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQG----FGL--SPDAVTYNTL 245

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           ++  C++G + +A+ L  +MK + + P   TYN+L+  +       +A  +   M   G 
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNR-A 184
           +P++ ++NV+   LC+ GK+DEA RL + M ++G + P+   YNTL D  C   R +  A
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADA-CFKCRCSSDA 364

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M   G K  + +++I+I G CK+ E+EGAL   ++M   G+ PDV+ YNTL   
Sbjct: 365 LRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHA 424

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT--------- 295
             +   + +A+ L DEM R G+  DT+   T +  LCK     EA  L ++         
Sbjct: 425 HCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPD 484

Query: 296 --------------------LRIL------KYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
                               LR+       K    I  YN LI GL + GRLK A +   
Sbjct: 485 EVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLN 544

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            L    L+ D  TYNI+IHA C +G ++ A
Sbjct: 545 ELMEKGLVPDDTTYNIIIHAYCKEGDLENA 574



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/398 (29%), Positives = 176/398 (44%), Gaps = 42/398 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +    ++ FG  P+  TYNTL+N  CR G    A  L   M       GV   P   
Sbjct: 222 DALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKD----GVA--PTRP 275

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA------- 114
           TY T++    + G++ +A ++   M      P++ TYN L  G C A   +EA       
Sbjct: 276 TYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEM 335

Query: 115 ---------------------KC--------LFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                                KC        L  EM ++GV+  +V+ N+++  LCK+G+
Sbjct: 336 ERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGE 395

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           ++ A   L  M   G+ P+   YNTL+   C  G + +A  L   M   G K + F+ + 
Sbjct: 396 LEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNT 455

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++   CK K  E A  L      +G  PD V Y T+    F+ +  E A +L+DEM    
Sbjct: 456 VLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKK 515

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +      Y T I GL + G + EA++    L       D   YN +I   CK G L+ A+
Sbjct: 516 LTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAF 575

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +    +       DVVT N +++ LC +GK+DKA  LF
Sbjct: 576 QFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLF 613



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 178/347 (51%), Gaps = 6/347 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYNTL +   +   +  AL L EEM     E GV  K   VT+  +I GLCK+G +
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMR----EKGV--KATLVTHNIVIKGLCKDGEL 396

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A     KM D+ + P+V+TYN+LIH  C A +  +A  L  EM+ +G++ +  + N +
Sbjct: 397 EGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTV 456

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LCK  + +EA  LL+   Q G  P+   Y T+M  +        A  L+  M     
Sbjct: 457 LYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKL 516

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +Y+ LI G  +   ++ A+   +E++ KG+ PD   YN +     +   +E AF+
Sbjct: 517 TPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQ 576

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             ++M  +    D     T ++GLC NG + +A++LF +      ++D+  YN LI  +C
Sbjct: 577 FHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMC 636

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K G +  A   F  +    L  D  TYN+++ AL   G+ ++A+++ 
Sbjct: 637 KDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNML 683



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 181/377 (48%), Gaps = 41/377 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV---------VCK------- 57
           G  P+V TYNTLI+  C+ G+   A  L +EM     +            +CK       
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469

Query: 58  -------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                        P+ V+Y T++    KE   + A  L+ +M ++ + P++ TYN+LI G
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKG 529

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
                   EA     E+M++G+ P+  ++N+I++  CK G ++ A +    M++   +P+
Sbjct: 530 LSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPD 589

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
               NTLM+G CL G++++A +LF S    G K +V +Y+ LI   CK+ +++ AL  ++
Sbjct: 590 VVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFA 649

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M ++G++PD   YN +   L E  + E A  +  ++   G  +     ++F   L K  
Sbjct: 650 DMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLS-----QSFSSPLLKPS 704

Query: 285 YIVEAVELFRTLRILKYELD------IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            + EA E  +  +  +  ++        AY  L++GLC SG+ K A  +   + +  +  
Sbjct: 705 SVDEA-ESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSV 763

Query: 339 DVVTYNIMIHALCADGK 355
           D  TY  ++  L    K
Sbjct: 764 DSSTYITLMEGLVKRQK 780



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/313 (28%), Positives = 150/313 (47%), Gaps = 3/313 (0%)

Query: 54  VVCKPNTVTYTTIIDGLCKEGFVDKAKEL--FLKMKDENINPNVVTYNSLIHGFCYANDW 111
           V  +P+      ++  L +         L  F  +    ++PN  T+N L+H  C     
Sbjct: 161 VRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTL 220

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            +A      M   G+ P+ V++N ++N  C+ G + EA  LL  M + GV P    YNTL
Sbjct: 221 ADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTL 280

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG- 230
           +  +   G + +A ++  +M + G + ++++Y++L  G C+  +++ A  L  EM   G 
Sbjct: 281 VSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGT 340

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           + PDVV YNTL    F+      A +L +EM+  GV A    +   I GLCK+G +  A+
Sbjct: 341 LLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGAL 400

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
                +       D+  YN LI   CK+G +  A+ L   + R  L  D  T N +++ L
Sbjct: 401 GCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNL 460

Query: 351 CADGKMDKARDLF 363
           C + + ++A+ L 
Sbjct: 461 CKEKRYEEAQGLL 473



 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 134/279 (48%), Gaps = 3/279 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCL--FIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + P++   N+++     +   +    L  F  ++   + PN  +FN++++  C  G + +
Sbjct: 163 VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLAD 222

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A   L  M   G+ P+A  YNTL++  C  G +  A  L   M+  G      +Y+ L++
Sbjct: 223 ALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVS 282

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG-VA 267
            Y +   I+ A  +   M + G +PD+  YN L  GL +  +V+ AF+L DEM+R G + 
Sbjct: 283 AYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLL 342

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   Y T  D   K     +A+ L   +R    +  +  +N +I GLCK G L+ A   
Sbjct: 343 PDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGC 402

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              +    L  DV+TYN +IHA C  G + KA  L  +M
Sbjct: 403 LNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 16/144 (11%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F  +   G +P+ FTYN +++ L   G T  A N+  ++A    E G + +       + 
Sbjct: 648 FADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLA----ESGTLSQ-------SF 696

Query: 67  IDGLCKEGFVDKAKE-LFLKMKDENI-NPN---VVTYNSLIHGFCYANDWNEAKCLFIEM 121
              L K   VD+A+     K ++E + NP       Y  L++G C +  + EAK +  EM
Sbjct: 697 SSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEM 756

Query: 122 MDQGVQPNVVSFNVIMNELCKNGK 145
           M +G+  +  ++  +M  L K  K
Sbjct: 757 MQKGMSVDSSTYITLMEGLVKRQK 780


>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 689

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 192/353 (54%), Gaps = 7/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV T+N +I+GL + G     L +++ M     E       +  TY+++I GLC EG V
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWDRMKQNERE------KDLYTYSSLIHGLCDEGNV 306

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           DKA+ +F ++ +     +VVTYN+++ GFC      E+  L+  +M+Q    N+VS+N++
Sbjct: 307 DKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELW-RIMEQRNSVNIVSYNIL 365

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L +NGK+DEA+ +  LM   G   +   Y   + G C+ G VN+A  +   +ES G 
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGG 425

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V++Y+ +I+  CK + +E A +L  EM   G++ +  + N L  GL    ++  A  
Sbjct: 426 HLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASL 485

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L   M ++G      +Y   I GLC+ G   EA    + +     + D++ Y+ L+ GLC
Sbjct: 486 LMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLC 545

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  ++++A EL+    +  L  DV+ +NI+IH LC+ GK+D A  +  +ME +
Sbjct: 546 RDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598



 Score =  173 bits (439), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 204/431 (47%), Gaps = 67/431 (15%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFE----------------- 43
            A  +F ++R +FGCEP + +YNTL+N        +   +LF                  
Sbjct: 96  RALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155

Query: 44  ----------EMANG--NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                     E A G  N  +    KP+  +Y+T+I+ L K G +D A ELF +M +  +
Sbjct: 156 IKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRV 215

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEAS 150
            P+V  YN LI GF    D   A  L+ +++ D  V PNV + N++++ L K G++D+  
Sbjct: 216 APDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           ++ + M Q     + + Y++L+ G C  G V++AE +F  +       +V +Y+ ++ G+
Sbjct: 276 KIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGF 335

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  +I+ +L L+  M  +    ++V YN L  GL E  +++ A  ++  M   G AAD 
Sbjct: 336 CRCGKIKESLELWRIMEQRN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADN 394

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y  FI GLC NGY+ +A+ + + +      LD+ AY  +ID LCK  RL+ A  L + 
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKE 454

Query: 331 LPR--------------GVLIAD---------------------VVTYNIMIHALCADGK 355
           + +              G LI D                     VV+YNI+I  LC  GK
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGK 514

Query: 356 MDKARDLFLDM 366
             +A     +M
Sbjct: 515 FGEASAFVKEM 525



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 176/316 (55%), Gaps = 3/316 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEA 114
           CK +     ++I    K    D+A ++F +M++     P + +YN+L++ F  A  W + 
Sbjct: 74  CKCDEDVALSVIKTYGKNSMPDRALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKV 133

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           + LF      GV PN+ ++NV++   CK  + ++A   L  M + G +P+ F Y+T+++ 
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVIND 193

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKP 233
              TG+++ A ELF  M       +V  Y+ILI+G+ K K+ + A+ L+ ++L    + P
Sbjct: 194 LAKTGKLDDALELFDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYP 253

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           +V  +N +  GL +  +V+   K++D M+++    D + Y + I GLC  G + +A  +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVF 313

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             L   K  +D+  YN ++ G C+ G++K + EL+R + +   + ++V+YNI+I  L  +
Sbjct: 314 NELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNSV-NIVSYNILIKGLLEN 372

Query: 354 GKMDKARDLFLDMEAK 369
           GK+D+A  ++  M AK
Sbjct: 373 GKIDEATMIWRLMPAK 388



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 176/333 (52%), Gaps = 7/333 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           AL++F+ M    G     C+P   +Y T+++   +     K + LF   +   + PN+ T
Sbjct: 97  ALDVFKRMREIFG-----CEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           YN LI   C   ++ +A+     M  +G +P+V S++ ++N+L K GK+D+A  L + M 
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMS 211

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEI 216
           +  V P+   YN L+DGF        A +L+  + E      NV +++I+I+G  K   +
Sbjct: 212 ERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRV 271

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           +  L ++  M     + D+  Y++L  GL +   V++A  +F+E+       D   Y T 
Sbjct: 272 DDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTM 331

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           + G C+ G I E++EL+R +   +  ++I +YN LI GL ++G++  A  ++R +P    
Sbjct: 332 LGGFCRCGKIKESLELWRIME-QRNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            AD  TY I IH LC +G ++KA  +  ++E+K
Sbjct: 391 AADNTTYGIFIHGLCVNGYVNKALGVMQEVESK 423



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 171/351 (48%), Gaps = 13/351 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V TYNT++ G CR G    +L L+  M   N         N V+Y  +I GL + G +D
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEQRNS-------VNIVSYNILIKGLLENGKID 376

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  ++  M  +    +  TY   IHG C     N+A  +  E+  +G   +V ++  I+
Sbjct: 377 EATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGVMQEVESKGGHLDVYAYASII 436

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + LCK  +++EAS L++ M + GV  N+ V N L+ G     R++ A  L   M   GC 
Sbjct: 437 DCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGMGKNGCL 496

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             V SY+ILI G C+  +   A +   EML  G+KPD+  Y+ L  GL    ++E A +L
Sbjct: 497 PTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKIELALEL 556

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           + +  + G+  D   +   I GLC  G + +A+ +   +       ++  YN L++G  K
Sbjct: 557 WHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGYFK 616

Query: 318 ---SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
              S R  + W     +    L  D+++YN ++  LC   ++  A + F D
Sbjct: 617 VRDSNRATVIWGYMYKMG---LQPDIISYNTILKGLCLCHRVSYAIEFFDD 664



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 143/276 (51%), Gaps = 6/276 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   G   +V+ Y ++I+ LC+      A NL +EM+    E       N+ 
Sbjct: 412 KALGVMQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVEL------NSH 465

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
               +I GL ++  +  A  L   M      P VV+YN LI G C A  + EA     EM
Sbjct: 466 VCNALIGGLIRDSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEM 525

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G++P++ ++++++  LC++ K++ A  L    +Q G+ P+  ++N L+ G C  G++
Sbjct: 526 LENGLKPDLKTYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKL 585

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +  +ME   C  N+ +Y+ L+ GY K ++   A  ++  M   G++PD++ YNT+
Sbjct: 586 DDAMTVMANMEHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTI 645

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
             GL   H+V  A + FD+ + HG+    + +   +
Sbjct: 646 LKGLCLCHRVSYAIEFFDDARNHGIFPTVYTWNILV 681



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 108/213 (50%), Gaps = 6/213 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ L   +   GC P V +YN LI GLC  G    A    +EM   NG      KP+  
Sbjct: 482 DASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLE-NG-----LKPDLK 535

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ ++ GLC++  ++ A EL+ +     + P+V+ +N LIHG C     ++A  +   M
Sbjct: 536 TYSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANM 595

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +    N+V++N +M    K    + A+ +   M ++G++P+   YNT++ G CL  RV
Sbjct: 596 EHRNCTANLVTYNTLMEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRV 655

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           + A E F    + G    V++++IL+      K
Sbjct: 656 SYAIEFFDDARNHGIFPTVYTWNILVRAVVNRK 688


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  191 bits (485), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/362 (32%), Positives = 182/362 (50%), Gaps = 32/362 (8%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV+T+ TLI+GLC+ G T  A  LF ++   +G      KPN  TYT +I+G CKE
Sbjct: 324 GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGY-----KPNVHTYTAMINGYCKE 378

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             +++A+ L  +M+++ + PN  TY +LI G C   ++  A  L   M  +G  PN+ ++
Sbjct: 379 DKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTY 438

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N I++ LCK G +DEA RLL  +   G++ +   Y  LM   C     NR+   F  M  
Sbjct: 439 NAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLK 498

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   ++ SY+ LI+ +C+ K+++ +  L+ E +S G+ P    Y ++  G         
Sbjct: 499 VGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSL 558

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A KLF  M  HG A D+  Y   I GLCK   + +A  L               Y+ ++D
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL---------------YDAMMD 603

Query: 314 -GL--CKSGRLKIAWELFRSLPRGVLI---------ADVVTYNIMIHALCADGKMDKARD 361
            GL  C+  RL +A+E  +       I           + T N ++  LC++GK+D A  
Sbjct: 604 KGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAAL 663

Query: 362 LF 363
            F
Sbjct: 664 FF 665



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 188/403 (46%), Gaps = 42/403 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F+++   G  P+  ++  ++   C  G  + A    E+  N   E G +   +  T
Sbjct: 208 AENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEA----EKWLNAMVERGFIV--DNAT 261

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            T IID  C++G+V++    F KM +  + PNV+ + +LI+G C      +A  L  EM+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G +PNV +   +++ LCK G  ++A RL L+L+   G +PN   Y  +++G+C   ++
Sbjct: 322 RRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKL 381

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           NRAE L   M+  G   N  +Y+ LI+G+CK      A  L   M  +G  P++  YN +
Sbjct: 382 NRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAI 441

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAA--------------------------------- 268
             GL +   ++ A++L +++  HG+ A                                 
Sbjct: 442 IDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGF 501

Query: 269 --DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
             D  +Y T I   C+   + E+  LF     L      + Y  +I G C+ G   +A +
Sbjct: 502 TPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVK 561

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LF+ +       D +TY  +I  LC + K+D AR+L+  M  K
Sbjct: 562 LFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDK 604



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/330 (29%), Positives = 164/330 (49%), Gaps = 7/330 (2%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A+N+  EM N     G+V   +T T   ++D     G V+ A+ +F++M    ++P+ V+
Sbjct: 173 AVNMVVEMQNQ----GLV--XSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVS 226

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           +  ++   C      EA+     M+++G   +  +  +I++  C+ G ++        M+
Sbjct: 227 FKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMV 286

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++G+ PN   +  L++G C  G + +A EL   M   G K NV++++ LI+G CK    E
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 218 GALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A  L+ +++ S G KP+V  Y  +  G  +  ++ RA  L   MQ  G+  +T  Y T 
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           IDG CK G  V A EL   +    +  +I  YN +IDGLCK G L  A+ L   +    L
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGL 466

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
            AD VTY I++   C     +++   F  M
Sbjct: 467 QADGVTYTILMSVHCRQADTNRSLVFFNKM 496



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 134/270 (49%), Gaps = 2/270 (0%)

Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           ++  F       EA  + +EM +QG+  +  + N +++     G ++ A  +   M Q G
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRG 219

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           V P+   +  ++   C  GRV  AE+   +M   G   +  + +++I+ +C+   +   +
Sbjct: 220 VSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVV 279

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             + +M+  G+ P+V+ +  L  GL +   +++AF+L +EM R G   + + + T IDGL
Sbjct: 280 GYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGL 339

Query: 281 CKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           CK G+  +A  LF + +R   Y+ ++  Y  +I+G CK  +L  A  L   +    L+ +
Sbjct: 340 CKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPN 399

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             TY  +I   C  G   +A +L +D+  K
Sbjct: 400 TNTYTTLIDGHCKVGNFVRAYEL-MDLMGK 428



 Score = 85.5 bits (210), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 84/150 (56%), Gaps = 11/150 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  LF +    G  P   TY ++I G CR G+T +A+ LF+ M+N        C P+++
Sbjct: 523 ESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHG------CAPDSI 576

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCKE  +D A+ L+  M D+ ++P  VT  +L + +C  +D + A    I +
Sbjct: 577 TYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTA----INV 632

Query: 122 MDQGVQPN-VVSFNVIMNELCKNGKMDEAS 150
           +D+  +   + + N ++ +LC  GK+D A+
Sbjct: 633 LDRLEKRQWIRTVNTLVRKLCSEGKLDMAA 662



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 111/234 (47%), Gaps = 11/234 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+ V G + +  TY  L++  CR   T  +L  F +M        V   P+  
Sbjct: 453 EAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKM------LKVGFTPDIH 506

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YTT+I   C++  + +++ LF +     + P   TY S+I G+C   + + A  LF  M
Sbjct: 507 SYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P+ +++  +++ LCK  K+D+A  L + M+  G+ P      TL   +C     
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDS 626

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           + A  +   +E    +  + + + L+   C   +++ A   + ++L K  +P+V
Sbjct: 627 STAINVLDRLEK---RQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDK--EPNV 675



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 65/152 (42%), Gaps = 9/152 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   GC P+  TY  LI+GLC+      A NL++ M +          P  VT
Sbjct: 559 AVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKG------LSPCEVT 612

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
             T+    CK+     A  +  +++       + T N+L+   C     + A   F +++
Sbjct: 613 RLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLVRKLCSEGKLDMAALFFHKLL 669

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           D+    N V+    MN+  ++ K    S L E
Sbjct: 670 DKEPNVNRVTLLGFMNKCYESNKYGLVSELSE 701


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPN+  YN LI+G C  G    AL +FE M +GN      C PN  TYT +I GLCK 
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHGLCKS 260

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A  LF +M +  + PNVVTY +LI G C       A  L   M   G+ PN  +F
Sbjct: 261 GKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTF 320

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +V+++ LCK  K++EA   L  +++ GV+ N  VY +L+DG C TG+++ A+EL   M S
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  SYS LI+G C+ K++  A  +  +M+ KGI+   V Y  +   L      E 
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEG 440

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             K+FD+M   G+  D   Y  F+   C+ G + +A  +   +       ++  YN LI 
Sbjct: 441 PKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIR 500

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G    G +  A+  F  +       +  +Y +++  +      D + D++
Sbjct: 501 GYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW 550



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 182/370 (49%), Gaps = 10/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHT-IVALNLFEEMANGNGEFGVVCKPNT 60
           EA  +F+ +R   C P+   Y T+++GLC  G T    + L E M+NG        +PN 
Sbjct: 160 EAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNG-------FEPNI 212

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +IDG C  G ++ A ++F  M     +PNV TY  LIHG C +     A  LF  
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G++PNVV++  ++   C  G +  A RLL LM   G+ PN + ++ L+D  C   +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A+    S+   G K N   Y+ LI+G CK  +I+ A  L  +M+S+G  PD   Y++
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL    ++ +A  + ++M   G+ A    Y   ID L +        ++F  +    
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              DI  Y   +   C+ GR++ A  +  + + RGV   ++VTYN +I      G + +A
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF-PNLVTYNTLIRGYANLGLVSQA 511

Query: 360 RDLFLDMEAK 369
              F  M  K
Sbjct: 512 FSTFEVMVGK 521



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 182/369 (49%), Gaps = 12/369 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME+ A  M  R      N+ TY TLIN  C  G    A      + +          P++
Sbjct: 60  MESLASRMPAR------NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAG------LAPDS 107

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             YT+ + G C+ G +  A  +F+ M          TY +L+HG   A    EA  +F+ 
Sbjct: 108 YAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVG 167

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+   +  +++ LC+ G+ +EA  LLE  +  G  PN  VYN L+DG+C  G 
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++F  M+   C  NV +Y+ LI+G CK+ ++E A+ L+S M+  G++P+VV Y  
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      ++ AF+L   M+ +G+  + W +   ID LCK   + EA     +L    
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +++   Y  LIDGLCK+G++  A EL + +     + D  +Y+ +I  LC   K+ +A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 361 DLFLDMEAK 369
            +  DM  K
Sbjct: 408 LMLEDMMEK 416



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+ + + GC    FTY  L++GL   G    A+ +F  M   +      C P+T 
Sbjct: 125 HACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADS------CAPDTH 178

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ GLC+ G  ++A+ L  +       PN+V YN+LI G+C A +   A  +F  M
Sbjct: 179 VYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM 238

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PNV ++  +++ LCK+GK++ A  L   M++ G+ PN   Y  L+ G C  G +
Sbjct: 239 DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHL 298

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   ME+ G   N +++S+LI+  CK +++E A      ++ KG+K + V+Y +L
Sbjct: 299 QCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSL 358

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A +L  +M   G   D  +Y + IDGLC+   + +A  +   +     
Sbjct: 359 IDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     Y  +ID L +    +   ++F  +    +  D+VTY + + + C +G+M+ A  
Sbjct: 419 QASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAES 478

Query: 362 LFLDM 366
           + + M
Sbjct: 479 MIVQM 483



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 170/355 (47%), Gaps = 6/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + Y + + G CR G    A  +F  M          C     TYT ++ GL   
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG------CLRTAFTYTALLHGLLGA 155

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  +F+ M+ ++  P+   Y +++HG C A    EA+ L  E M  G +PN+V +
Sbjct: 156 GMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C  G+M+ A ++ E M      PN   Y  L+ G C +G+V RA  LF  M  
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE 275

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV +Y+ LI G C    ++ A  L   M + G+ P+   ++ L   L +  +VE 
Sbjct: 276 AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEE 335

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A      + + GV  +   Y + IDGLCK G I  A EL + +    +  D  +Y+ LID
Sbjct: 336 AQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLID 395

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           GLC+  +L  A  +   +    + A  VTY I+I  L  +   +  + +F  M A
Sbjct: 396 GLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 38/220 (17%)

Query: 185 EELFVSMESMGCK---HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD------- 234
             +F  MES+  +    N+ +Y+ LIN YC   +I  A    + +L  G+ PD       
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 235 ----------------------------VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                          Y  L  GL     V  A  +F  M+    
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSC 173

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A DT  Y T + GLC+ G   EA  L        +E +I  YN LIDG C +G ++ A +
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +F  +       +V TY  +IH LC  GK+++A  LF  M
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 4/136 (2%)

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P +   NTL + L       R F   + +     A +   Y T I+  C  G I  A + 
Sbjct: 39  PPLRCLNTLLMALAR----HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQH 94

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
             +L       D  AY   + G C++G L  A  +F  +P    +    TY  ++H L  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 353 DGKMDKARDLFLDMEA 368
            G + +A  +F+ M A
Sbjct: 155 AGMVREAMTVFVGMRA 170


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EPN+  YN LI+G C  G    AL +FE M +GN      C PN  TYT +I GLCK 
Sbjct: 207 GFEPNIVVYNALIDGYCNAGEMEHALKVFEGM-DGNR-----CSPNVRTYTELIHGLCKS 260

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V++A  LF +M +  + PNVVTY +LI G C       A  L   M   G+ PN  +F
Sbjct: 261 GKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTF 320

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +V+++ LCK  K++EA   L  +++ GV+ N  VY +L+DG C TG+++ A+EL   M S
Sbjct: 321 SVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMIS 380

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  SYS LI+G C+ K++  A  +  +M+ KGI+   V Y  +   L      E 
Sbjct: 381 EGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEG 440

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             K+FD+M   G+  D   Y  F+   C+ G + +A  +   +       ++  YN LI 
Sbjct: 441 PKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIR 500

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G    G +  A+  F  +       +  +Y +++  +      D + D++
Sbjct: 501 GYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIW 550



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/370 (31%), Positives = 183/370 (49%), Gaps = 10/370 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHT-IVALNLFEEMANGNGEFGVVCKPNT 60
           EA A+F+ +R   C P+   Y T+++GLC  G T    + L E M+NG        +PN 
Sbjct: 160 EAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNG-------FEPNI 212

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y  +IDG C  G ++ A ++F  M     +PNV TY  LIHG C +     A  LF  
Sbjct: 213 VVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSR 272

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++ G++PNVV++  ++   C  G +  A RLL LM   G+ PN + ++ L+D  C   +
Sbjct: 273 MVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREK 332

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A+    S+   G K N   Y+ LI+G CK  +I+ A  L  +M+S+G  PD   Y++
Sbjct: 333 VEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSS 392

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL    ++ +A  + ++M   G+ A    Y   ID L +        ++F  +    
Sbjct: 393 LIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATG 452

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              DI  Y   +   C+ GR++ A  +  + + RGV   ++VTYN +I      G + +A
Sbjct: 453 INPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVF-PNLVTYNTLIRGYANLGLVSQA 511

Query: 360 RDLFLDMEAK 369
              F  M  K
Sbjct: 512 FSTFEVMVGK 521



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 182/369 (49%), Gaps = 12/369 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME+ A  M  R      N+ TY TLIN  C  G    A      + +          P++
Sbjct: 60  MESLASRMPAR------NLRTYTTLINAYCLAGDIPAAKQHLTSLLHAG------LAPDS 107

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             YT+ + G C+ G +  A  +F+ M          TY +L+HG   A    EA  +F+ 
Sbjct: 108 YAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVG 167

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M      P+   +  +++ LC+ G+ +EA  LLE  +  G  PN  VYN L+DG+C  G 
Sbjct: 168 MRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGE 227

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++F  M+   C  NV +Y+ LI+G CK+ ++E A+ L+S M+  G++P+VV Y  
Sbjct: 228 MEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA 287

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G      ++ AF+L   M+ +G+  + W +   ID LCK   + EA     +L    
Sbjct: 288 LIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKG 347

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +++   Y  LIDGLCK+G++  A EL + +     + D  +Y+ +I  LC   K+ +A 
Sbjct: 348 VKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQAT 407

Query: 361 DLFLDMEAK 369
            +  DM  K
Sbjct: 408 LMLEDMMEK 416



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+ + + GC    FTY  L++GL   G    A+ +F  M   +      C P+T 
Sbjct: 125 HACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADS------CAPDTH 178

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++ GLC+ G  ++A+ L  +       PN+V YN+LI G+C A +   A  +F  M
Sbjct: 179 VYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM 238

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PNV ++  +++ LCK+GK++ A  L   M++ G+ PN   Y  L+ G C  G +
Sbjct: 239 DGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHL 298

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L   ME+ G   N +++S+LI+  CK +++E A      ++ KG+K + V+Y +L
Sbjct: 299 QCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSL 358

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +++ A +L  +M   G   D  +Y + IDGLC+   + +A  +   +     
Sbjct: 359 IDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGI 418

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +     Y  +ID L +    +   ++F  +    +  D+VTY + + + C +G+M+ A  
Sbjct: 419 QASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAES 478

Query: 362 LFLDM 366
           + + M
Sbjct: 479 MIVQM 483



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 170/355 (47%), Gaps = 6/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + Y + + G CR G    A  +F  M          C     TYT ++ GL   
Sbjct: 102 GLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRG------CLRTAFTYTALLHGLLGA 155

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A  +F+ M+ ++  P+   Y +++HG C A    EA+ L  E M  G +PN+V +
Sbjct: 156 GMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVY 215

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C  G+M+ A ++ E M      PN   Y  L+ G C +G+V RA  LF  M  
Sbjct: 216 NALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVE 275

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + NV +Y+ LI G C    ++ A  L   M + G+ P+   ++ L   L +  +VE 
Sbjct: 276 AGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEE 335

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A      + + GV  +   Y + IDGLCK G I  A EL + +    +  D  +Y+ LID
Sbjct: 336 AQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLID 395

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           GLC+  +L  A  +   +    + A  VTY I+I  L  +   +  + +F  M A
Sbjct: 396 GLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 181/405 (44%), Gaps = 41/405 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANG----NGEFGVV-- 55
           A  LF ++   G EPNV TY  LI G C  GH   A  L   M  NG    +  F V+  
Sbjct: 266 AMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLID 325

Query: 56  ----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                  K N V YT++IDGLCK G +D A EL  KM  E   P
Sbjct: 326 ALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVP 385

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           +  +Y+SLI G C     ++A  +  +MM++G+Q + V++ +I++EL +    +   ++ 
Sbjct: 386 DAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIF 445

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + MI  G+ P+   Y   +  +C  GR+  AE + V M   G   N+ +Y+ LI GY   
Sbjct: 446 DKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANL 505

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLF------------IGLFEIHQVERAFKLFDEM 261
             +  A S +  M+ KG KP+   Y  L             + +++I  ++    L +++
Sbjct: 506 GLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDI 565

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
               +      Y  FI  LC+   + EA   F  ++          Y  +ID  C+   L
Sbjct: 566 TERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKIL 625

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             A  L  S+ +   +  + +Y I+I +LC  G    A+++F D+
Sbjct: 626 TDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDL 670



 Score =  112 bits (279), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 150/359 (41%), Gaps = 54/359 (15%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  K+   G  P+  +Y++LI+GLCR      A  + E+M     E G+   P  VT
Sbjct: 371 ADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMM----EKGIQASP--VT 424

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT IID L +E   +  K++F KM    INP++VTY   +  +C      +A+ + ++M+
Sbjct: 425 YTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN------------------ 164
           D+GV PN+V++N ++      G + +A    E+M+  G +PN                  
Sbjct: 485 DRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSD 544

Query: 165 -----------------------------AFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
                                        A +Y+  +   C   R+  A+  F+ M++  
Sbjct: 545 NSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNAN 604

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +   Y+ +I+  C+ K +  AL+L   M   G  P +  Y  +   L E      A 
Sbjct: 605 LTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAK 664

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           ++F ++       D   ++  I GL + G + E   L   ++   Y+      N +I G
Sbjct: 665 EVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPS-NTINAMITG 722



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 38/220 (17%)

Query: 185 EELFVSMESMGCK---HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD------- 234
             +F  MES+  +    N+ +Y+ LIN YC   +I  A    + +L  G+ PD       
Sbjct: 54  HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSF 113

Query: 235 ----------------------------VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                                          Y  L  GL     V  A  +F  M+    
Sbjct: 114 VLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSC 173

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A DT  Y T + GLC+ G   EA  L        +E +I  YN LIDG C +G ++ A +
Sbjct: 174 APDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALK 233

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +F  +       +V TY  +IH LC  GK+++A  LF  M
Sbjct: 234 VFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 23/268 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++ +++   G  PN+ TYNTLI G    G    A + FE M  G G      KPN  
Sbjct: 475 DAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV-GKG-----WKPNED 528

Query: 62  TYTTIIDGLCKEGFVDKAKELF--LKMKD-----ENINPNVVT-----YNSLIHGFCYAN 109
           +YT ++  + K+   D + +++    MKD     E+I    +      Y+  I   C  +
Sbjct: 529 SYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVD 588

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
              EAK  F+ M +  + P+   +  I++  C+   + +A  LL+ M + G  P+   Y 
Sbjct: 589 RLEEAKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYR 648

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            ++   C  G    A+E+F  +      ++   + ILI G  +   +    SL S M   
Sbjct: 649 IIISSLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEH 708

Query: 230 GIKPDVVIYNTLFIGLF----EIHQVER 253
           G +P   I N +  G      E+ ++ R
Sbjct: 709 GYQPSNTI-NAMITGEITVTNEVQEIAR 735



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 4/136 (2%)

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           P +   NTL + L       R F   + +     A +   Y T I+  C  G I  A + 
Sbjct: 39  PPLRCLNTLLMALAR----HRMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQH 94

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
             +L       D  AY   + G C++G L  A  +F  +P    +    TY  ++H L  
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 353 DGKMDKARDLFLDMEA 368
            G + +A  +F+ M A
Sbjct: 155 AGMVREAMAVFVGMRA 170


>gi|297826581|ref|XP_002881173.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327012|gb|EFH57432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 917

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/344 (33%), Positives = 181/344 (52%), Gaps = 7/344 (2%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF-VD 77
           V+ ++ LI+   R+G    A+++F  M     E+G+  +PN VTY  +ID   K G    
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMK----EYGL--RPNLVTYNAVIDACGKGGMEFK 321

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +  + F +M+   + P+ +T+NSL+        W  A+ LF EM ++ ++ +V S+N ++
Sbjct: 322 QVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLL 381

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + +CK G+MD A  +L  M    + PN   Y+T++DGF   GR + A  LF  M  +   
Sbjct: 382 DAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIA 441

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  SY+ L++ Y K    E AL +  EM S GIK DVV YN L  G  +  + +   K+
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F EM+R  V  +   Y T IDG  K G   EA+E+FR  +      D+  Y+ LID LCK
Sbjct: 502 FAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCK 561

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +G +  A  L   + +  +  +VVTYN +I A      M+++ D
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSAD 605



 Score =  151 bits (381), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 162/322 (50%), Gaps = 7/322 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVAL-NLFEEMANGNGEFGVVCKPNT 60
           EA ++F  ++ +G  PN+ TYN +I+   + G     +   F+EM           +P+ 
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN------CVQPDR 339

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T+ +++    + G  + A+ LF +M +  I  +V +YN+L+   C     + A  +  +
Sbjct: 340 ITFNSLLAVCSRGGLWEAARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQ 399

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + + PNVVS++ +++   K G+ DEA  L   M  + +  +   YNTL+  +   GR
Sbjct: 400 MPAKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGR 459

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A ++   M S+G K +V +Y+ L+ GY K  + +    +++EM  + + P+++ Y+T
Sbjct: 460 SEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYST 519

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +    + A ++F E +  G+ AD   Y   ID LCKNG +  AV L   +    
Sbjct: 520 LIDGYSKGGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG 579

Query: 301 YELDIRAYNCLIDGLCKSGRLK 322
              ++  YN +ID   +S  ++
Sbjct: 580 ISPNVVTYNSIIDAFGRSATME 601



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 134/252 (53%), Gaps = 6/252 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++     E +VF+YNTL++ +C+ G   +A  +  +M            PN V+
Sbjct: 358 ARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKR------IMPNVVS 411

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T+IDG  K G  D+A  LF +M+  NI  + V+YN+L+  +       EA  +  EM 
Sbjct: 412 YSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMA 471

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G++ +VV++N ++    K GK DE  ++   M +  V PN   Y+TL+DG+   G   
Sbjct: 472 SVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYK 531

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A E+F   +S G + +V  YS LI+  CKN  +  A+SL  EM  +GI P+VV YN++ 
Sbjct: 532 EAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSII 591

Query: 243 IGLFEIHQVERA 254
                   +ER+
Sbjct: 592 DAFGRSATMERS 603



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 156/339 (46%), Gaps = 36/339 (10%)

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           + +I  L + G V  AK +F           V  +++LI  +  +    EA  +F  M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFSGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296

Query: 124 QGVQPNVVSFNVIMNELCKNG-KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            G++PN+V++N +++   K G +  + ++  + M +  V+P+   +N+L+      G   
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNCVQPDRITFNSLLAVCSRGGLWE 356

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  LF  M +   + +VFSY+ L++  CK  +++ A  + ++M +K I P+VV Y+T+ 
Sbjct: 357 AARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAKRIMPNVVSYSTVI 416

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  + + A  LF EM+   +A D  +Y T +    K G   EA+++ R +  +  +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476

Query: 303 LDIRAYNC-----------------------------------LIDGLCKSGRLKIAWEL 327
            D+  YN                                    LIDG  K G  K A E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEV 536

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           FR      L ADVV Y+ +I ALC +G +  A  L  +M
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 137/297 (46%), Gaps = 52/297 (17%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMAN--------------------GNGE----- 51
           PNV +Y+T+I+G  + G    ALNLF EM                      G  E     
Sbjct: 407 PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLNIALDRVSYNTLLSIYTKVGRSEEALDI 466

Query: 52  ----FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
                 V  K + VTY  ++ G  K+G  D+ K++F +MK E++ PN++TY++LI G+  
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFAEMKREHVLPNLLTYSTLIDGYSK 526

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
              + EA  +F E    G++ +VV ++ +++ LCKNG +  A  L++ M + G+ PN   
Sbjct: 527 GGLYKEAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVT 586

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY----------------- 210
           YN+++D F  +  + R+ + + +  S+    +  S      G                  
Sbjct: 587 YNSIIDAFGRSATMERSAD-YSNGGSLPFSSSALSELTETEGNRVIQLFGQLTSEGNNRM 645

Query: 211 ---CKN--KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
              CK   +E+   L ++ +M    IKP+VV ++ +       +  E A  L +E++
Sbjct: 646 TKDCKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 106/240 (44%), Gaps = 44/240 (18%)

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPN--AFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           I+ EL   G+ D+A    E  ++   R N    + + ++      G+V  A+ +F +  S
Sbjct: 202 IIRELGNRGECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFS 261

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF----IGLFEIH 249
            G  + V+++S LI+ Y ++   E A+S+++ M   G++P++V YN +      G  E  
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           QV    K FDEMQR+ V  D   + + +  +C  G + EA                    
Sbjct: 322 QVA---KFFDEMQRNCVQPDRITFNSLL-AVCSRGGLWEA-------------------- 357

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                         A  LF  +    +  DV +YN ++ A+C  G+MD A ++   M AK
Sbjct: 358 --------------ARNLFDEMSNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPAK 403



 Score = 52.8 bits (125), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 26/176 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F + +  G   +V  Y+ LI+ LC+ G    A++L +EM            PN V
Sbjct: 532 EAMEVFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG------ISPNVV 585

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +IID   +   ++++ +          N   + ++S         + N    LF ++
Sbjct: 586 TYNSIIDAFGRSATMERSADY--------SNGGSLPFSSSALSELTETEGNRVIQLFGQL 637

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL---MIQIGVRPNAFVYNTLMDG 174
             +G        N  M + CK G M E S +LE+   M Q+ ++PN   ++ +++ 
Sbjct: 638 TSEG--------NNRMTKDCKEG-MQELSCILEVFRKMHQLEIKPNVVTFSAILNA 684



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 90/223 (40%), Gaps = 25/223 (11%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRT------------GHTIVALNLFEEMANGNG 50
           A +L  ++   G  PNV TYN++I+   R+            G    + +   E+    G
Sbjct: 568 AVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMERSADYSNGGSLPFSSSALSELTETEG 627

Query: 51  E-----FGVVCKPNTVTYTTIIDGLCKEGFVDKA--KELFLKMKDENINPNVVTYNSLIH 103
                 FG +        T      CKEG  + +   E+F KM    I PNVVT++++++
Sbjct: 628 NRVIQLFGQLTSEGNNRMTKD----CKEGMQELSCILEVFRKMHQLEIKPNVVTFSAILN 683

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
                N + +A  L  E+     +   V   ++M +  +     +A  L + + ++    
Sbjct: 684 ACSRCNSFEDASMLLEELRLFDNKVYGVVHGLLMGQ--RENVWLQAQSLFDKVNEMDGST 741

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +  YN L D     G+   AE + +   S     NV+S S L
Sbjct: 742 ASAFYNALTDMLWHFGQKRGAELVALEGRSRQVWENVWSDSCL 784


>gi|218194640|gb|EEC77067.1| hypothetical protein OsI_15461 [Oryza sativa Indica Group]
          Length = 548

 Score =  191 bits (484), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 181/351 (51%), Gaps = 13/351 (3%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
            +F  + +   LCR   ++ ++        G GE     +      T  +D L      D
Sbjct: 127 KMFRVSDVATKLCRRHRSLGSVK------GGAGETARTVRRKPTVGTGRLDRL------D 174

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF-NVI 136
            A E F  M D  +  +   Y  LI G C   D  +AK L  +M+ +G+ P  + F   I
Sbjct: 175 DAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKGIPPPCIKFFTSI 234

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LCK G++ E   +++L+I  G RPN   +N+L+DG+CL G +  A  L  SMES+G 
Sbjct: 235 INNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGV 294

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + ++++Y+ L++GYCK+  I+ AL+L+ +ML K +    V YN +  GLF+  +   A +
Sbjct: 295 EPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKE 354

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F EM   G+A     Y T + GLC+N    EA  L   L  +  + DI  +N +I  + 
Sbjct: 355 MFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMF 414

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           K GR++ A ELF ++    L+  ++TY +MI  L  +   + A +LF  ME
Sbjct: 415 KVGRMQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSME 465



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 163/343 (47%), Gaps = 5/343 (1%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G   +   Y  LI G C  G  + A  L  +M +       +  P    +T+II+ LCK
Sbjct: 186 IGVPLDTAVYGCLIQGQCNRGDLVKAKELISDMLSKG-----IPPPCIKFFTSIINNLCK 240

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           EG V + K++   +      PN++T+NSL+ G+C   +  EA  L   M   GV+P++ +
Sbjct: 241 EGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYT 300

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++  CK+G++D+A  L   M+   V   +  YN ++ G     R   A+E+F  M 
Sbjct: 301 YNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEMI 360

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   ++ +Y+ ++ G C+N   + A  L  ++ S  +K D++ +N +   +F++ +++
Sbjct: 361 ESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQ 420

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A +LF  +  +G+      YR  I  L K     +A  LF ++       D    N +I
Sbjct: 421 EAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEII 480

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
             L   G +  A      + +  ++ +  T +++I+    +GK
Sbjct: 481 RMLLNKGEIAKAGHYLSKIDKKGILPEATTTSLLIYLFSVNGK 523



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 142/288 (49%), Gaps = 10/288 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN+ T+N+L++G C  G+   A+ L + M +      V  +P+  TY T++DG CK 
Sbjct: 258 GQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMES------VGVEPDIYTYNTLVDGYCKH 311

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A  LF  M  + +    V+YN ++HG   A     AK +F EM++ G+  ++ ++
Sbjct: 312 GRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTVVAKEMFHEMIESGMAVSIHTY 371

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++  LC+N   DEA+ LLE +  + V+ +   +N ++      GR+  A+ELF ++ +
Sbjct: 372 ATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRMQEAKELFAAIST 431

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G    + +Y ++I    K +  E A +L+S M   G  PD  I N +   L    ++ +
Sbjct: 432 YGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSGCTPDSCILNEIIRMLLNKGEIAK 491

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNG----YIVEAVELFRTLR 297
           A     ++ + G+  +       I     NG    YI    E +R LR
Sbjct: 492 AGHYLSKIDKKGILPEATTTSLLIYLFSVNGKYREYIKLLPEKYRFLR 539



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 5/129 (3%)

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
           +G   + +++ A + F  M   GV  DT  Y   I G C  G +V+A EL   +  L   
Sbjct: 165 VGTGRLDRLDDAMEKFKHMIDIGVPLDTAVYGCLIQGQCNRGDLVKAKELISDM--LSKG 222

Query: 303 LD---IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +    I+ +  +I+ LCK GR+    ++   +       +++T+N ++   C  G M +A
Sbjct: 223 IPPPCIKFFTSIINNLCKEGRVAEGKDIVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEA 282

Query: 360 RDLFLDMEA 368
             L   ME+
Sbjct: 283 VGLLDSMES 291


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 196/421 (46%), Gaps = 61/421 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F ++R  GC PNV TY  LI+   +      A  LFE M +        C PN V
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG------CLPNIV 589

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM----------------KDENINPNVVTYNSLIHGF 105
           TY+ +IDG CK G V+KA ++F +M                 D +  PNVVTY +L+ GF
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE----------------- 148
           C ++   EA+ L   M  +G +PN + ++ +++ LCK GK+DE                 
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709

Query: 149 ------------------ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
                             AS++L  M++    PN  +Y  ++DG C  G+ + A +L   
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           ME  GC+ NV +Y+ +I+G+    +IE  L L   M SKG+ P+ V Y  L     +   
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ A  L +EM++      T  YR  I+G   N   +E++ L   +        +  Y  
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRL 887

Query: 311 LIDGLCKSGRLKIAWELFRSLP--RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           LID L K+ RL++A  L   +      L+    TYN +I +LC   K++ A  LF +M  
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947

Query: 369 K 369
           K
Sbjct: 948 K 948



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 178/413 (43%), Gaps = 63/413 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+   +N+L++  C +G    A  L ++M            P  V Y  +I  +C +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------MPGYVVYNILIGSICGD 420

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D A++ + +M    +  N +  +S     C A  + +A  +  EM+ QG  
Sbjct: 421 KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG-------- 179
           P+  +++ ++N LC   KM+ A  L E M + G+  + + Y  ++D FC  G        
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 180 ---------------------------RVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
                                      +V+ A ELF +M S GC  N+ +YS LI+G+CK
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 213 NKEIEGALSLYSEML-SKGI---------------KPDVVIYNTLFIGLFEIHQVERAFK 256
             ++E A  ++  M  SK +               +P+VV Y  L  G  + H+VE A K
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D M   G   +   Y   IDGLCK G + EA E+   +    +   +  Y+ LID   
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K  R  +A ++   +       +VV Y  MI  LC  GK D+A  L   ME K
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 178/390 (45%), Gaps = 32/390 (8%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG---------VVCK-- 57
           +L+ F   P+  TYN LI    +      A  +  EM+  N              +CK  
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284

Query: 58  ---------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 102
                          P+TV YT +I GLC+    ++A +   +M+  +  PNVVTY++L+
Sbjct: 285 KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
            G          K +   MM +G  P+   FN +++  C +G    A +LL+ M++ G  
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404

Query: 163 PNAFVYNTLMDGFCLTGR------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           P   VYN L+   C          ++ AE+ +  M + G   N  + S      C   + 
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A S+  EM+ +G  PD   Y+ +   L    ++E AF LF+EM+R G+ AD + Y   
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +D  CK G I +A + F  +R +    ++  Y  LI    K+ ++  A ELF ++     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + ++VTY+ +I   C  G+++KA  +F  M
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERM 614



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 152/332 (45%), Gaps = 51/332 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           EA  L   + + GCEPN   Y+ LI+GLC+ G    A  +  EM+               
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 49  NGEFGV----------------VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           +  F V                 C PN V YT +IDGLCK G  D+A +L   M+++   
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTY ++I GF           L   M  +GV PN V++ V+++  CKNG +D A  L
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS---------Y 203
           LE M Q     +   Y  +++GF          + F+  ES+G    +           Y
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF---------NKEFI--ESLGLLDEIGQDDTAPFLSVY 885

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +LI+   K + +E AL L  E+   S  +      YN+L   L   ++VE AF+LF EM
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            + GV  +  ++ + I GL +N  I EA+ L 
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 158/398 (39%), Gaps = 52/398 (13%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTVTYTTIIDG 69
           R  G +     YN L++ + R     V     +++ + + E FG            ++  
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRK 209

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            C+ G    A E   ++KD    P+  TYN LI  F  A+  + A  +  EM    ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
             +       LCK GK  EA  L+E        P+   Y  L+ G C       A +   
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 190 SMESMGCKHNVFSYSILING-----------------------------------YCKNK 214
            M +  C  NV +YS L+ G                                   YC + 
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGL------FEIHQVERAFKLFDEMQRHGVAA 268
           +   A  L  +M+  G  P  V+YN L   +           ++ A K + EM   GV  
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           +     +F   LC  G   +A  + R +    +  D   Y+ +++ LC + ++++A+ LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             + RG L+ADV TY IM+ + C  G +++AR  F +M
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 41/184 (22%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  TY  LI+  C+ G   VA NL EEM   +         +T  Y  +I+G  KE
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW------PTHTAGYRKVIEGFNKE 862

Query: 74  -----GFVD----------------------KAK--ELFLKMKDE--NINPNVV----TY 98
                G +D                      KA+  E+ L++ +E    +  +V    TY
Sbjct: 863 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 922

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           NSLI   C AN    A  LF EM  +GV P + SF  ++  L +N K+ EA  LL+ +  
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISH 982

Query: 159 IGVR 162
           + ++
Sbjct: 983 MEIQ 986


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/377 (31%), Positives = 195/377 (51%), Gaps = 16/377 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF---------- 52
           A  LF  +   GC PNV TY  LI+G C++G+   A  ++  M  G+ +           
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM-RGDADIPDVDMYFKIK 636

Query: 53  -GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
             V  KPN VTY  ++DGLCK   V  A++L   M  +   PN + Y++LI GFC A   
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           +EA+ +F +M+++G  PNV +++ +++ L K+ ++D   ++L  M++    PN  +Y  +
Sbjct: 697 DEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG     + + A +L + ME  GCK NV +Y+ +I+G+ K  +++  L L+ EM SKG 
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+ V Y  L         ++ A+ L +EM++        +Y   I+G  K  +I+ ++ 
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFIL-SLG 874

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG--VLIADVVTYNIMIHA 349
           L   +        I  Y  LID   K+GRL++A EL + +      + A    Y  +I++
Sbjct: 875 LLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYS 934

Query: 350 LCADGKMDKARDLFLDM 366
                K+D A +LF DM
Sbjct: 935 FSYASKIDHAFELFYDM 951



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 182/370 (49%), Gaps = 22/370 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TY+ +I  LC       A  LF+EM       GVV  P+  TYT +ID   K 
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT----GVV--PDVYTYTILIDCFSKA 537

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A     +M  +   P VVTY +LIH +  A   + A  LF  M+ +G  PNV+++
Sbjct: 538 GIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 134 NVIMNELCKNGKMDEASRLLELMI----------------QIGVRPNAFVYNTLMDGFCL 177
             +++  CK+G +++A ++   M                  +  +PN   Y  L+DG C 
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             +V  A +L  +M   GC+ N   Y  LI+G+CK  +++ A  ++ +M+ +G  P+V  
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYT 717

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y++L   LF+  +++   K+  +M  +  A +   Y   IDGL K     EA +L   + 
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + ++  Y  +IDG  K+G++    ELFR +       + VTY ++I+  CA G +D
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837

Query: 358 KARDLFLDME 367
           +A  L  +M+
Sbjct: 838 EAYALLEEMK 847



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 174/385 (45%), Gaps = 20/385 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI--VALNLFEEMANGNGEFGVVCKPNT 60
           A  L  K+    C+P    YN LI  +C  G     V   L E+  N     G V   N 
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL--NK 454

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V   +    LC  G  +KA ++  +M      P+  TY+ +I   C A+    A  LF E
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV P+V ++ ++++   K G + +A   L+ M++ G  P    Y TL+  +    +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--------- 231
           V+ A ELF  M + GC  NV +Y+ LI+GYCK+  IE A  +Y+ M              
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 232 -------KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                  KP+VV Y  L  GL + H+V+ A  L + M   G   +T  Y   IDG CK  
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + EA E+F  +    Y  ++  Y+ LID L K  RL +  ++   +       ++V Y 
Sbjct: 695 KLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            MI  L    K D+A  L L ME K
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEK 779



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 165/370 (44%), Gaps = 21/370 (5%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           +L+ FG +P   TYN L+    R      A  +  EM+    E G+     T+ +     
Sbjct: 231 RLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS----ELGLSMDEFTLGF--FAQ 284

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK G   K +E    ++ E+  PN + YN +I G C A+ + EA      M      P
Sbjct: 285 ALCKVG---KWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NV ++ +++       ++    R+L +MI  G  P+  ++N+L+  +C +   + A +L 
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------YSEMLSKGI---KPDVVIYN 239
             ME   CK     Y+ILI   C   E+ G ++       Y+EMLS G    K +VV + 
Sbjct: 402 KKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFA 461

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
               G     + E+A+K+  EM  +G   DT  Y   I  LC    +  A  LF+ ++  
Sbjct: 462 RCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+  Y  LID   K+G +K A      + R      VVTY  +IHA     K+  A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578

Query: 360 RDLFLDMEAK 369
            +LF  M AK
Sbjct: 579 NELFELMIAK 588



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 148/326 (45%), Gaps = 33/326 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  L   + V GCEPN   Y+ LI+G C+      A  +F +M        V       
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLI 722

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C PN V YT +IDGL K    D+A +L L M+++   
Sbjct: 723 DRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCK 782

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTY ++I GF  A   ++   LF EM  +G  PN V++ V++N  C  G +DEA  L
Sbjct: 783 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL 842

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M Q     +   Y  +++G+     ++    L   +E  G    +  Y +LI+ + K
Sbjct: 843 LEEMKQTYWPKHVSSYCKVIEGYKREFILSLG--LLEEVEKNGSAPTILLYKVLIDNFVK 900

Query: 213 NKEIEGALSLYSEMLSKGIKPDVV--IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
              +E AL L+ E++S  +       +Y +L        +++ AF+LF +M R GV  D 
Sbjct: 901 AGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMIRDGVIPDL 960

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTL 296
             +   + GL +     EA++L  +L
Sbjct: 961 GTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 27/318 (8%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I   C+ G  + A E   ++KD    P  +TYN+L+  F  A+  + A+ +  EM + G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +  +  +       LCK GK  EA  L+E   +    PN  +YN ++ G C       A 
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAM 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +    M S  C  NV +Y IL+ G    K++     + S M+++G  P   I+N+L    
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +      A+KL  +M++         Y   I  +C  G +   V          +EL  
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV---------TFELAE 439

Query: 306 RAYNCLIDG---------------LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           +AYN ++                 LC  G+ + A+++   +     + D  TY+ +I  L
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 351 CADGKMDKARDLFLDMEA 368
           C   +++ A  LF +M+ 
Sbjct: 500 CNASRVENAFFLFKEMKG 517



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 15/230 (6%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            NV++ + C+NG  + A   L  +   G +P    YN L+  F    +++ A+ +   M 
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            +G   + F+        CK  +   ALSL  +   +   P+ ++YN +  GL E    E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFE 325

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL------DIR 306
            A    + M+      +   YR  + G C N       +L R  RIL   +         
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCG-CLN-----KKQLGRCKRILSMMIAEGCYPSYT 379

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +N L+   CKS     A++L + + +       V YNI+I ++C+ G++
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGEL 429


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 194/395 (49%), Gaps = 28/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
           +A  L+ ++++ G +PNVF  N+L+ G         A  LF+E                 
Sbjct: 378 KAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLK 437

Query: 50  --GEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
             GE G V                P+ V+Y  +I G CK+G +DKA  +   + +  + P
Sbjct: 438 WLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKP 497

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N VTY  LI GF    D   A  +F +MM   + P   +FN ++N L K G++ E    L
Sbjct: 498 NAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKL 557

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
              I+ G    +  YN+++DGF   G V+ A   +  M   G   +V +Y+ LI+G CK+
Sbjct: 558 NNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKS 617

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +I  AL ++S+M  KG+K DVV Y+ L  G  ++H +E A K F E+   G+  +T  Y
Sbjct: 618 NKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVY 677

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            + I G      +  A+ L + +   K   D++ Y  +I GL K G+L +A +L+  +  
Sbjct: 678 NSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLS 737

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             ++ D+V Y ++I+ L  +G+++ A  +  +M+ 
Sbjct: 738 KDIVPDIVMYTVLINGLSNNGQLENASKILKEMDG 772



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ K+   G  P++ +YN LI G C+ G    A ++ + +     E G+  KPN V
Sbjct: 447 EACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSIL----ERGL--KPNAV 500

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDG  K+G  ++A  +F +M   NI P   T+N++I+G       +E +      
Sbjct: 501 TYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNF 560

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + QG     +++N I++   K G +D A      M + G+ P+   Y +L+DG C + ++
Sbjct: 561 IKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKI 620

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+   M+  G K +V +YS LI+G+CK  ++E A   ++E+L  G+ P+ V+YN++
Sbjct: 621 GLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSM 680

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   ++ +E A  L  EM ++ V  D   Y + I GL K G +  A++L+  +     
Sbjct: 681 ISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDI 740

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  Y  LI+GL  +G+L+ A ++ + +    +   V+ YNI+I     +G + +A  
Sbjct: 741 VPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFR 800

Query: 362 LFLDM 366
           L  +M
Sbjct: 801 LHDEM 805



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/366 (31%), Positives = 190/366 (51%), Gaps = 7/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L  ++   G   NV    +L+ G C  G   +AL LF+E+  G    GVV  P+ 
Sbjct: 307 VEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEG----GVV--PDV 360

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V ++ +I+G  K G ++KA EL+ +MK   I PNV   NSL+ GF   N    A  LF E
Sbjct: 361 VIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE 420

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            ++ G+  NVV++N+++  L + GK++EA  L E M+  G+ P+   YN L+ G C  G 
Sbjct: 421 AVEHGIT-NVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGC 479

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +++A  +  S+   G K N  +Y++LI+G+ K  + E A  ++ +M++  I P    +NT
Sbjct: 480 MDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNT 539

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +  +V       +   + G  + +  Y + IDG  K G +  A+  +R +    
Sbjct: 540 VINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESG 599

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D+  Y  LIDGLCKS ++ +A E+   +    +  DVV Y+ +I   C    M+ A 
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 361 DLFLDM 366
             F ++
Sbjct: 660 KFFTEL 665



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 164/336 (48%), Gaps = 6/336 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PN  TY  LI+G  + G +  A  +FE+M   N        P   T+ T+I+GL K 
Sbjct: 494 GLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAAN------IAPTDHTFNTVINGLGKT 547

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V + ++       +      +TYNS+I GF      + A   + EM + G+ P+V+++
Sbjct: 548 GRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITY 607

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +++ LCK+ K+  A  +   M   G++ +   Y+ L+DGFC    +  A + F  +  
Sbjct: 608 TSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLD 667

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   N   Y+ +I+G+     +E AL+L+ EM+   +  D+ +Y ++  GL +  ++  
Sbjct: 668 IGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSL 727

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L+ EM    +  D   Y   I+GL  NG +  A ++ + +        +  YN LI 
Sbjct: 728 ALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIA 787

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           G  + G L+ A+ L   +    L+ D  TY+I+++ 
Sbjct: 788 GNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 823



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 139/262 (53%), Gaps = 6/262 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           TYN++I+G  + G    AL  + EM     E G+   P+ +TYT++IDGLCK   +  A 
Sbjct: 571 TYNSIIDGFFKEGAVDSALLAYREMC----ESGI--SPDVITYTSLIDGLCKSNKIGLAL 624

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           E+   MK + +  +VV Y++LI GFC  +D   A   F E++D G+ PN V +N +++  
Sbjct: 625 EMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGF 684

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
                M+ A  L + MI+  V  +  VY +++ G    G+++ A +L+  M S     ++
Sbjct: 685 IHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDI 744

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
             Y++LING   N ++E A  +  EM    I P V++YN L  G F    ++ AF+L DE
Sbjct: 745 VMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRLHDE 804

Query: 261 MQRHGVAADTWAYRTFIDGLCK 282
           M   G+  D   Y   ++G  K
Sbjct: 805 MLDKGLVPDDTTYDILVNGKLK 826



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 104/352 (29%), Positives = 168/352 (47%), Gaps = 7/352 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P V   N L+  + R      A  L++EM    G +G     +  T   ++    KEG  
Sbjct: 183 PWVPIMNNLLTAMVRRNMVCDARQLYDEMVE-RGIYG-----DCYTLHVVMRACMKEGKF 236

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++ ++ F + K   +  +   Y+ L+   C   D N A  L  EM + G  P+  ++  +
Sbjct: 237 EEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAV 296

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    K G   EA RL + M+ +G+  N  V  +LM G+C+ G VN A +LF  +   G 
Sbjct: 297 IVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGV 356

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V  +S+LING  K  ++E A  LY+ M   GI+P+V I N+L  G  E + +E A+ 
Sbjct: 357 VPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYG 416

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           LFDE   HG+  +   Y   +  L + G + EA  L+  +        + +YN LI G C
Sbjct: 417 LFDEAVEHGI-TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHC 475

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           K G +  A+ + +S+    L  + VTY ++I      G  ++A  +F  M A
Sbjct: 476 KKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMA 527



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 119/238 (50%), Gaps = 6/238 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TY +LI+GLC++    +AL +  +M           K + V Y+ +IDG CK 
Sbjct: 599 GISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKG------MKLDVVAYSALIDGFCKM 652

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             ++ A + F ++ D  + PN V YNS+I GF + N+   A  L  EM+   V  ++  +
Sbjct: 653 HDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVY 712

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             I+  L K GK+  A  L   M+   + P+  +Y  L++G    G++  A ++   M+ 
Sbjct: 713 TSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDG 772

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
                +V  Y+ILI G  +   ++ A  L+ EML KG+ PD   Y+ L  G  ++   
Sbjct: 773 NNITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHT 830



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 159/322 (49%), Gaps = 5/322 (1%)

Query: 49  NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 108
           +G +G   + ++  +  ++    +   +  A E F  M + ++ P V   N+L+      
Sbjct: 141 SGRYGF--ESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRR 198

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
           N   +A+ L+ EM+++G+  +  + +V+M    K GK +E  +  +     G+  +A  Y
Sbjct: 199 NMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAY 258

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           + L+   C    +N A EL   M   G   +  +Y+ +I    K      AL L  EM+S
Sbjct: 259 SILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVS 318

Query: 229 KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
            G+  +V++  +L  G   +  V  A +LFDE+   GV  D   +   I+G  K G + +
Sbjct: 319 VGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEK 378

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMI 347
           A EL+  ++++  + ++   N L++G  +   L+ A+ LF  ++  G  I +VVTYNI++
Sbjct: 379 AYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG--ITNVVTYNILL 436

Query: 348 HALCADGKMDKARDLFLDMEAK 369
             L   GK+++A +L+  M +K
Sbjct: 437 KWLGELGKVNEACNLWEKMVSK 458



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 103/255 (40%), Gaps = 43/255 (16%)

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN--- 208
           LLE   + G   ++ V+N L+  F    ++  A E F +M     +H++  +  ++N   
Sbjct: 137 LLECSGRYGFESDSRVFNYLLKSFVRVNKITDAVECFRTM----LEHDLVPWVPIMNNLL 192

Query: 209 -GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
               +   +  A  LY EM+ +GI  D    + +     +  + E   K F E +  G+ 
Sbjct: 193 TAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLE 252

Query: 268 ADTWAYRTFIDGLC-----------------------------------KNGYIVEAVEL 292
            D  AY   +  +C                                   K G  VEA+ L
Sbjct: 253 VDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRL 312

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
              +  +   +++     L+ G C  G + +A +LF  +  G ++ DVV ++++I+    
Sbjct: 313 KDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSK 372

Query: 353 DGKMDKARDLFLDME 367
            G M+KA +L+  M+
Sbjct: 373 VGDMEKAYELYTRMK 387


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  190 bits (483), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 196/421 (46%), Gaps = 61/421 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F ++R  GC PNV TY  LI+   +      A  LFE M +        C PN V
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG------CLPNIV 589

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM----------------KDENINPNVVTYNSLIHGF 105
           TY+ +IDG CK G V+KA ++F +M                 D +  PNVVTY +L+ GF
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE----------------- 148
           C ++   EA+ L   M  +G +PN + ++ +++ LCK GK+DE                 
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709

Query: 149 ------------------ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
                             AS++L  M++    PN  +Y  ++DG C  G+ + A +L   
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           ME  GC+ NV +Y+ +I+G+    +IE  L L   M SKG+ P+ V Y  L     +   
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ A  L +EM++      T  YR  I+G   N   +E++ L   +        +  Y  
Sbjct: 830 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRL 887

Query: 311 LIDGLCKSGRLKIAWELFRSLP--RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           LID L K+ RL++A  L   +      L+    TYN +I +LC   K++ A  LF +M  
Sbjct: 888 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 947

Query: 369 K 369
           K
Sbjct: 948 K 948



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 178/413 (43%), Gaps = 63/413 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+   +N+L++  C +G    A  L ++M            P  V Y  +I  +C +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------MPGYVVYNILIGSICGD 420

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D A++ + +M    +  N +  +S     C A  + +A  +  EM+ QG  
Sbjct: 421 KDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG-------- 179
           P+  +++ ++N LC   KM+ A  L E M + G+  + + Y  ++D FC  G        
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 180 ---------------------------RVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
                                      +V+ A ELF +M S GC  N+ +YS LI+G+CK
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 213 NKEIEGALSLYSEML-SKGI---------------KPDVVIYNTLFIGLFEIHQVERAFK 256
             ++E A  ++  M  SK +               +P+VV Y  L  G  + H+VE A K
Sbjct: 601 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 660

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D M   G   +   Y   IDGLCK G + EA E+   +    +   +  Y+ LID   
Sbjct: 661 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 720

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K  R  +A ++   +       +VV Y  MI  LC  GK D+A  L   ME K
Sbjct: 721 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 178/390 (45%), Gaps = 32/390 (8%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG---------VVCK-- 57
           +L+ F   P+  TYN LI    +      A  +  EM+  N              +CK  
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 284

Query: 58  ---------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 102
                          P+TV YT +I GLC+    ++A +   +M+  +  PNVVTY++L+
Sbjct: 285 KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 344

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
            G          K +   MM +G  P+   FN +++  C +G    A +LL+ M++ G  
Sbjct: 345 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 404

Query: 163 PNAFVYNTLMDGFCLTGR------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           P   VYN L+   C          ++ AE+ +  M + G   N  + S      C   + 
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A S+  EM+ +G  PD   Y+ +   L    ++E AF LF+EM+R G+ AD + Y   
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 524

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +D  CK G I +A + F  +R +    ++  Y  LI    K+ ++  A ELF ++     
Sbjct: 525 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 584

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + ++VTY+ +I   C  G+++KA  +F  M
Sbjct: 585 LPNIVTYSALIDGHCKAGQVEKACQIFERM 614



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 152/332 (45%), Gaps = 51/332 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           EA  L   + + GCEPN   Y+ LI+GLC+ G    A  +  EM+               
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716

Query: 49  NGEFGV----------------VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           +  F V                 C PN V YT +IDGLCK G  D+A +L   M+++   
Sbjct: 717 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 776

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTY ++I GF           L   M  +GV PN V++ V+++  CKNG +D A  L
Sbjct: 777 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 836

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS---------Y 203
           LE M Q     +   Y  +++GF          + F+  ES+G    +           Y
Sbjct: 837 LEEMKQTHWPTHTAGYRKVIEGF---------NKEFI--ESLGLLDEIGQDDTAPFLSVY 885

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +LI+   K + +E AL L  E+   S  +      YN+L   L   ++VE AF+LF EM
Sbjct: 886 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 945

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            + GV  +  ++ + I GL +N  I EA+ L 
Sbjct: 946 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 977



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 158/398 (39%), Gaps = 52/398 (13%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTVTYTTIIDG 69
           R  G +     YN L++ + R     V     +++ + + E FG            ++  
Sbjct: 157 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGEF-------LNVLVRK 209

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            C+ G    A E   ++KD    P+  TYN LI  F  A+  + A  +  EM    ++ +
Sbjct: 210 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 269

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
             +       LCK GK  EA  L+E        P+   Y  L+ G C       A +   
Sbjct: 270 GFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLN 326

Query: 190 SMESMGCKHNVFSYSILING-----------------------------------YCKNK 214
            M +  C  NV +YS L+ G                                   YC + 
Sbjct: 327 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGL------FEIHQVERAFKLFDEMQRHGVAA 268
           +   A  L  +M+  G  P  V+YN L   +           ++ A K + EM   GV  
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           +     +F   LC  G   +A  + R +    +  D   Y+ +++ LC + ++++A+ LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             + RG L+ADV TY IM+ + C  G +++AR  F +M
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544



 Score = 62.8 bits (151), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 41/178 (23%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  TY  LI+  C+ G   VA NL EEM   +         +T  Y  +I+G  KE
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW------PTHTAGYRKVIEGFNKE 862

Query: 74  -----GFVD----------------------KAK--ELFLKMKDE--NINPNVV----TY 98
                G +D                      KA+  E+ L++ +E    +  +V    TY
Sbjct: 863 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 922

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           NSLI   C AN    A  LF EM  +GV P + SF  ++  L +N K+ EA  LL+ +
Sbjct: 923 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 980


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 115/365 (31%), Positives = 190/365 (52%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF ++   G  P+ FTYN LI+ LC+      ALNL+E+M     E GV  KP  V
Sbjct: 370 DAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKM----NETGV--KPYIV 422

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +++   C  G +D+A +L+ +M  +   PNVVTY +L+ G      +++A  L  EM
Sbjct: 423 TYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEM 482

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV  N  ++N ++N LC  G++ E   +L+     G  P A  YN++++GF   G +
Sbjct: 483 KQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMM 542

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  ++  M + G   N+ +Y+  I+GYCK    + AL + +++  KG++PD+  YN+L
Sbjct: 543 GSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSL 602

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   +  A ++   M + G+  +   Y +FI G      + EA+  +  +     
Sbjct: 603 IYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGI 662

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +LD   Y  LIDG  K G +  A +L+  +     I D +T+  + H LC +G +D AR 
Sbjct: 663 DLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARK 722

Query: 362 LFLDM 366
           L  +M
Sbjct: 723 LLDEM 727



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/358 (32%), Positives = 180/358 (50%), Gaps = 8/358 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  PNV TY TL+ G         A  L  EM       GV C  N  
Sbjct: 439 EAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQN----GVSC--NDY 492

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GLC  G V +  E+  + + E   P  +TYNS+I+GF  A     A  ++ +M
Sbjct: 493 TYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN+V++   ++  CK    D A ++L  +   G+RP+   YN+L+ GFC  G +
Sbjct: 553 CAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNM 612

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++ V M   G   N+  Y+  I GY   K +E AL  Y +M+ +GI  D   Y TL
Sbjct: 613 SHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTL 672

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V  A KL+ EM   G   D   +     GLC+NG I +A +L   +  L  
Sbjct: 673 IDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDI 732

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI--HALCADGKMD 357
             ++  YN LI+G  ++G+L+ A+ L   +    ++ D  TY+I++   +L +D  +D
Sbjct: 733 RPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVGMKSLGSDSPID 790



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 179/365 (49%), Gaps = 7/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  +L   G + +V    TL++G C       AL++FEE        G+V  P  V
Sbjct: 265 EALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRD----GLV--PTDV 318

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I G  +EG  +KA EL  +M+D  + P+   +N +I G      W +A  LF EM
Sbjct: 319 TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEM 378

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+  ++N++++ LC+  K+ EA  L E M + GV+P    Y++L+  +C+ G +
Sbjct: 379 ADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCM 437

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L+  M   G   NV +Y+ L+ G+      + A +L +EM   G+  +   YNTL
Sbjct: 438 DEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTL 497

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +V    ++    +  G       Y + I+G  K G +  A  +++ +     
Sbjct: 498 INGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGI 557

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +I  Y   IDG CK+    +A ++   +    L  D+  YN +I+  C +G M  A  
Sbjct: 558 PPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQ 617

Query: 362 LFLDM 366
           + + M
Sbjct: 618 VLVLM 622



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 178/368 (48%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +  K++  G  P  FT+N++++ L + G    AL++ +E+     +  VV      
Sbjct: 230 RALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLA---- 285

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             TT++ G C +  V KA ++F +   + + P  VTY  LI G        +A  L  +M
Sbjct: 286 --TTLMHGYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM 343

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G+ P+   FN+++  L  +    +A  L + M   G+ P+AF YN L+   C   ++
Sbjct: 344 RDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKI 402

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  L+  M   G K  + +Y  L+  YC N  ++ A+ LY+EM  KG  P+VV Y TL
Sbjct: 403 REALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G       ++A+ L  EM+++GV+ + + Y T I+GLC  G + E  E+ +      +
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 YN +I+G  K+G +  A+ +++ +    +  ++VTY   I   C     D A  
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALK 582

Query: 362 LFLDMEAK 369
           +  D+  K
Sbjct: 583 MLNDVRCK 590



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 133/296 (44%), Gaps = 1/296 (0%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           KEG  D A  LF +M    I P+    +  I   C   D N A  +  +M D G  P   
Sbjct: 189 KEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FN +++ L K G+M+EA  + + ++  G + +  +  TLM G+CL   V +A ++F   
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G      +Y++LI G  +    E A  L  +M   G+ P    +N +  GL      
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
           + A  LF EM   G+  D + Y   I  LC+   I EA+ L+  +     +  I  Y+ L
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +   C +G +  A +L+  +P      +VVTY  ++         DKA  L  +M+
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMK 483



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 99/238 (41%), Gaps = 36/238 (15%)

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           +A++++ +M      G  + A  LF  M +   + +    S+ I   CK ++   AL + 
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M   G  P    +N++   L +  ++E A  + DE+   G         T + G C  
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 284 GYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS------LP---- 332
             + +A+++F  TLR      D+  Y  LI G  + G  + A+EL R       LP    
Sbjct: 296 REVRKALDIFEETLRDGLVPTDV-TYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNE 354

Query: 333 -----RGVL-------------------IADVVTYNIMIHALCADGKMDKARDLFLDM 366
                +G+L                   I D  TYNI+IH LC   K+ +A +L+  M
Sbjct: 355 FNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKM 412



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 76/174 (43%)

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
           SME+ G   +  S + L+    ++     AL+L +EM  KG   D  +++ +    F+  
Sbjct: 132 SMEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEG 191

Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
             + A +LFDEM    +  D       I  LCK      A+ + R ++   +      +N
Sbjct: 192 MYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFN 251

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ++D L K GR++ A  +   L        VV    ++H  C   ++ KA D+F
Sbjct: 252 SVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIF 305


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/421 (30%), Positives = 196/421 (46%), Gaps = 61/421 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F ++R  GC PNV TY  LI+   +      A  LFE M +        C PN V
Sbjct: 495 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG------CLPNIV 548

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM----------------KDENINPNVVTYNSLIHGF 105
           TY+ +IDG CK G V+KA ++F +M                 D +  PNVVTY +L+ GF
Sbjct: 549 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 608

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE----------------- 148
           C ++   EA+ L   M  +G +PN + ++ +++ LCK GK+DE                 
Sbjct: 609 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 668

Query: 149 ------------------ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
                             AS++L  M++    PN  +Y  ++DG C  G+ + A +L   
Sbjct: 669 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 728

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           ME  GC+ NV +Y+ +I+G+    +IE  L L   M SKG+ P+ V Y  L     +   
Sbjct: 729 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 788

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ A  L +EM++      T  YR  I+G   N   +E++ L   +        +  Y  
Sbjct: 789 LDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIGQDDTAPFLSVYRL 846

Query: 311 LIDGLCKSGRLKIAWELFRSLP--RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           LID L K+ RL++A  L   +      L+    TYN +I +LC   K++ A  LF +M  
Sbjct: 847 LIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTK 906

Query: 369 K 369
           K
Sbjct: 907 K 907



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 178/413 (43%), Gaps = 63/413 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+   +N+L++  C +G    A  L ++M            P  V Y  +I  +C +
Sbjct: 326 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------MPGYVVYNILIGSICGD 379

Query: 74  ------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D A++ + +M    +  N +  +S     C A  + +A  +  EM+ QG  
Sbjct: 380 KDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 439

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG-------- 179
           P+  +++ ++N LC   KM+ A  L E M + G+  + + Y  ++D FC  G        
Sbjct: 440 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 499

Query: 180 ---------------------------RVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
                                      +V+ A ELF +M S GC  N+ +YS LI+G+CK
Sbjct: 500 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 559

Query: 213 NKEIEGALSLYSEML-SKGI---------------KPDVVIYNTLFIGLFEIHQVERAFK 256
             ++E A  ++  M  SK +               +P+VV Y  L  G  + H+VE A K
Sbjct: 560 AGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARK 619

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D M   G   +   Y   IDGLCK G + EA E+   +    +   +  Y+ LID   
Sbjct: 620 LLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYF 679

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K  R  +A ++   +       +VV Y  MI  LC  GK D+A  L   ME K
Sbjct: 680 KVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 732



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 178/390 (45%), Gaps = 32/390 (8%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG---------VVCK-- 57
           +L+ F   P+  TYN LI    +      A  +  EM+  N              +CK  
Sbjct: 184 RLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVG 243

Query: 58  ---------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 102
                          P+TV YT +I GLC+    ++A +   +M+  +  PNVVTY++L+
Sbjct: 244 KWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLL 303

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
            G          K +   MM +G  P+   FN +++  C +G    A +LL+ M++ G  
Sbjct: 304 CGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHM 363

Query: 163 PNAFVYNTLMDGFCLTGR------VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           P   VYN L+   C          ++ AE+ +  M + G   N  + S      C   + 
Sbjct: 364 PGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 423

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A S+  EM+ +G  PD   Y+ +   L    ++E AF LF+EM+R G+ AD + Y   
Sbjct: 424 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIM 483

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           +D  CK G I +A + F  +R +    ++  Y  LI    K+ ++  A ELF ++     
Sbjct: 484 VDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGC 543

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + ++VTY+ +I   C  G+++KA  +F  M
Sbjct: 544 LPNIVTYSALIDGHCKAGQVEKACQIFERM 573



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 152/332 (45%), Gaps = 51/332 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           EA  L   + + GCEPN   Y+ LI+GLC+ G    A  +  EM+               
Sbjct: 616 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 675

Query: 49  NGEFGV----------------VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           +  F V                 C PN V YT +IDGLCK G  D+A +L   M+++   
Sbjct: 676 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 735

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTY ++I GF           L   M  +GV PN V++ V+++  CKNG +D A  L
Sbjct: 736 PNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 795

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS---------Y 203
           LE M Q     +   Y  +++GF          + F+  ES+G    +           Y
Sbjct: 796 LEEMKQTHWPTHTAGYRKVIEGF---------NKEFI--ESLGLLDEIGQDDTAPFLSVY 844

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +LI+   K + +E AL L  E+   S  +      YN+L   L   ++VE AF+LF EM
Sbjct: 845 RLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEM 904

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            + GV  +  ++ + I GL +N  I EA+ L 
Sbjct: 905 TKKGVIPEMQSFCSLIKGLFRNSKISEALLLL 936



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 158/398 (39%), Gaps = 52/398 (13%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-FGVVCKPNTVTYTTIIDG 69
           R  G +     YN L++ + R     V     +++ + + E FG            ++  
Sbjct: 116 RQIGYKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDDDKEVFGQF-------LNVLVRK 168

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            C+ G    A E   ++KD    P+  TYN LI  F  A+  + A  +  EM    ++ +
Sbjct: 169 HCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMD 228

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
             +       LCK GK  EA  L+E        P+   Y  L+ G C       A +   
Sbjct: 229 GFTLRCFAYSLCKVGKWREALTLVETE---NFVPDTVFYTKLISGLCEASLFEEAMDFLN 285

Query: 190 SMESMGCKHNVFSYSILING-----------------------------------YCKNK 214
            M +  C  NV +YS L+ G                                   YC + 
Sbjct: 286 RMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 345

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGL------FEIHQVERAFKLFDEMQRHGVAA 268
           +   A  L  +M+  G  P  V+YN L   +           ++ A K + EM   GV  
Sbjct: 346 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVL 405

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           +     +F   LC  G   +A  + R +    +  D   Y+ +++ LC + ++++A+ LF
Sbjct: 406 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 465

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             + RG L+ADV TY IM+ + C  G +++AR  F +M
Sbjct: 466 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 503



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 41/178 (23%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PN  TY  LI+  C+ G   VA NL EEM   +         +T  Y  +I+G  KE
Sbjct: 768 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHW------PTHTAGYRKVIEGFNKE 821

Query: 74  -----GFVD----------------------KAK--ELFLKMKDE--NINPNVV----TY 98
                G +D                      KA+  E+ L++ +E    +  +V    TY
Sbjct: 822 FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTY 881

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           NSLI   C AN    A  LF EM  +GV P + SF  ++  L +N K+ EA  LL+ +
Sbjct: 882 NSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFI 939


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 119/365 (32%), Positives = 189/365 (51%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ALF ++   G  PN  TY TLI+ L + G     L+L  EM +     GVV   + V
Sbjct: 292 EAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVS----RGVVM--DLV 345

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++D L K+G  D+ K+       +N++ N VTY  LI   C A++ +EA+ + +EM
Sbjct: 346 TYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEM 405

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + PNVV+F+ ++N   K G +D+A+    +M + G+ PN   Y TL+DGF      
Sbjct: 406 EEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQ 465

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E++  M   G + N F    L+NG  +N +IE A++L+ +    G+  D V Y TL
Sbjct: 466 DAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTL 525

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+   +  AFK   E+    +  D   Y  FI+ LC  G   EA  +   +R +  
Sbjct: 526 IDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGL 585

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D   YN +I   C+ G    A +L   +    +  +++TYN ++  L   G ++KA+ 
Sbjct: 586 KPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKY 645

Query: 362 LFLDM 366
           L  +M
Sbjct: 646 LLNEM 650



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/354 (32%), Positives = 177/354 (50%), Gaps = 6/354 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV TY   I   CRT     A +L+E M       GV+   + VT + ++ GLC++
Sbjct: 234 GVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN----GVLL--DVVTLSALVAGLCRD 287

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  LF +M      PN VTY +LI     A    E   L  EM+ +GV  ++V++
Sbjct: 288 GRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTY 347

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M+ L K GK DE    L   +   +  N   Y  L+D  C    V+ AE++ + ME 
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                NV ++S +ING+ K   ++ A      M  +GI P+VV Y TL  G F+    + 
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +++ +M   GV  + +   + ++GL +NG I EA+ LF+        LD   Y  LID
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLID 527

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           GL K+G +  A++  + L    ++ D V YN+ I+ LC  GK  +A+ +  +M 
Sbjct: 528 GLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMR 581



 Score =  162 bits (410), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 165/331 (49%), Gaps = 6/331 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+   YN  IN LC  G    A ++  EM N      +  KP+  TY T+I   C++G  
Sbjct: 552 PDAVVYNVFINCLCILGKFKEAKSILTEMRN------MGLKPDQSTYNTMIVSHCRKGET 605

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            KA +L  +MK  +I PN++TYN+L+ G        +AK L  EM+  G  P+ ++   +
Sbjct: 606 AKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRV 665

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +    ++ ++D    + E M+  G+  +  VYNTL+   C  G   +A  +   M   G 
Sbjct: 666 LQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGI 725

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  +++ LI G+CK+  ++ A + Y++ML + I P++  +NTL  GL  + ++  A  
Sbjct: 726 APDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGT 785

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM++ G+  +   Y   + G  K    VEA+ L+  +    +   +  YN LI    
Sbjct: 786 VLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFT 845

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           K+G +  A ELF+ + +  +     TY+I++
Sbjct: 846 KAGMMTQAKELFKDMQKRGVHPTSCTYDILV 876



 Score =  158 bits (400), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 179/356 (50%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E N F  ++L+NGL + G    A+ LF++ A+G+G        + V YTT+IDGL K 
Sbjct: 479 GVEVNKFIVDSLVNGLRQNGKIEEAMALFKD-ASGSG-----LSLDHVNYTTLIDGLFKA 532

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +  A +   ++ D N+ P+ V YN  I+  C    + EAK +  EM + G++P+  ++
Sbjct: 533 GDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTY 592

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++   C+ G+  +A +LL  M    ++PN   YNTL+ G   TG V +A+ L   M S
Sbjct: 593 NTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVS 652

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +  ++  ++    +++ ++  L ++  M++ G+  D+ +YNTL   L       +
Sbjct: 653 AGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRK 712

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  + +EM   G+A DT  +   I G CK+ ++  A   +  +       +I  +N L+ 
Sbjct: 713 ATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLG 772

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL   GR+  A  +   + +  L  + +TY+I++          +A  L+ +M  K
Sbjct: 773 GLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGK 828



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 163/366 (44%), Gaps = 46/366 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++  ++R  G +P+  TYNT+I   CR G T  AL L  EM   +       KPN +
Sbjct: 572 EAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSS------IKPNLI 625

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT------------------------ 97
           TY T++ GL   G V+KAK L  +M     +P+ +T                        
Sbjct: 626 TYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWM 685

Query: 98  -----------YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                      YN+L+   CY     +A  +  EM+  G+ P+ ++FN ++   CK+  +
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHL 745

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A      M+   + PN   +NTL+ G    GR+  A  + + ME  G + N  +Y IL
Sbjct: 746 DNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDIL 805

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           + G+ K      A+ LY EM+ KG  P V  YN L     +   + +A +LF +MQ+ GV
Sbjct: 806 VTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS-GRLKIAW 325
              +  Y   + G  +   I    E+ + L+ +K E         +  +C++  +  + W
Sbjct: 866 HPTSCTYDILVSGWSR---IRNGTEVKKCLKDMK-EKGFSPSKGTLSFICRAFSKPGMTW 921

Query: 326 ELFRSL 331
           +  R L
Sbjct: 922 QAQRLL 927



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 171/365 (46%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  + +++      PNV T++++ING  + G     L+   E      E G+   PN V
Sbjct: 397 EAEQVLLEMEEKSISPNVVTFSSVINGFVKRG----LLDKATEYKRMMKERGI--NPNVV 450

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+IDG  K    D A E++  M  E +  N    +SL++G        EA  LF + 
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDA 510

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+  + V++  +++ L K G M  A +  + ++   + P+A VYN  ++  C+ G+ 
Sbjct: 511 SGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKF 570

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A+ +   M +MG K +  +Y+ +I  +C+  E   AL L  EM    IKP+++ YNTL
Sbjct: 571 KEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTL 630

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF    VE+A  L +EM   G +  +  +R  +    ++  +   +++   +     
Sbjct: 631 VAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGL 690

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN L+  LC  G  + A  +   +    +  D +T+N +I   C    +D A  
Sbjct: 691 HADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFA 750

Query: 362 LFLDM 366
            +  M
Sbjct: 751 TYAQM 755



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 157/347 (45%), Gaps = 12/347 (3%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P    YN L+  L    H   A  +  EM      F      + VT  T++ GLC+ G 
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPF------DGVTVNTLLAGLCRNGQ 150

Query: 76  VDKAKELFLKMKDENINP-NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           VD A  L    +   I+  +V+ +N+LI G+C   D   A  +   M  QG+  +VV +N
Sbjct: 151 VDAAAAL--ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYN 208

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++   C+ G++D A  +L++M + GV PN   Y   +  +C T  V  A +L+  M   
Sbjct: 209 TLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRN 268

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +V + S L+ G C++     A +L+ EM   G  P+ V Y TL   L +  + +  
Sbjct: 269 GVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKEL 328

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             L  EM   GV  D   Y   +D L K G   E  +  R        L+   Y  LID 
Sbjct: 329 LSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDA 388

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           LCK+  +  A ++   +    +  +VVT++ +I+     G +DKA +
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATE 435



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 143/316 (45%), Gaps = 10/316 (3%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P TV Y  ++  L        A  +  +M    +  + VT N+L+ G C     + A  
Sbjct: 100 RPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 117 LFIEMMDQG---VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           L     D+G      +V+ +N ++   C+ G    A  + + M   G+  +   YNTL+ 
Sbjct: 157 L----ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVA 212

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           GFC  G+V+ A  +   M+  G   NV +Y+  I  YC+ K +E A  LY  M+  G+  
Sbjct: 213 GFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLL 272

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV  + L  GL    +   A+ LF EM + G   +   Y T ID L K G   E + L 
Sbjct: 273 DVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLL 332

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +      +D+  Y  L+D L K G+     +  R      L  + VTY ++I ALC  
Sbjct: 333 GEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKA 392

Query: 354 GKMDKARDLFLDMEAK 369
             +D+A  + L+ME K
Sbjct: 393 HNVDEAEQVLLEMEEK 408



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/330 (24%), Positives = 134/330 (40%), Gaps = 41/330 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++++   +PN+ TYNTL+ GL  TG    A  L  EM +          P+++
Sbjct: 607 KALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAG------FSPSSL 660

Query: 62  T-----------------------------------YTTIIDGLCKEGFVDKAKELFLKM 86
           T                                   Y T++  LC  G   KA  +  +M
Sbjct: 661 THRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEM 720

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
               I P+ +T+N+LI G C ++  + A   + +M+ Q + PN+ +FN ++  L   G++
Sbjct: 721 LGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRI 780

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            EA  +L  M + G+ PN   Y+ L+ G         A  L+  M   G    V +Y+ L
Sbjct: 781 GEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNAL 840

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+ + K   +  A  L+ +M  +G+ P    Y+ L  G   I       K   +M+  G 
Sbjct: 841 ISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGF 900

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +              K G   +A  L + L
Sbjct: 901 SPSKGTLSFICRAFSKPGMTWQAQRLLKNL 930



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 6/158 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  + +++   G EPN  TY+ L+ G  +  + + A+ L+ EM  G G       P   
Sbjct: 782 EAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMV-GKGFV-----PKVS 835

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I    K G + +AKELF  M+   ++P   TY+ L+ G+    +  E K    +M
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDM 895

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            ++G  P+  + + I     K G   +A RLL+ + ++
Sbjct: 896 KEKGFSPSKGTLSFICRAFSKPGMTWQAQRLLKNLYRV 933


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 54/415 (13%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A++ ++      P+V TY  LI+GLC+T  T  AL LF+EM +     G++  PN + 
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR----GIL--PNQII 235

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC---YAND--------- 110
           Y+ ++ GLC+   +  A+ LF KM+    N +++TYN L++GFC   Y +D         
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLT 295

Query: 111 -----------------------WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                                  + EA   + +M+ + ++P+V+ + +++  L + G++ 
Sbjct: 296 KDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVT 355

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA  LL  M + G+RP+   YN L+ GFC  G ++ AE L + +    C  N  +YSILI
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILI 415

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM------ 261
            G CKN  I  A  ++ EM   G  P VV +N+L  GL + +++E A  LF +M      
Sbjct: 416 CGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKP 475

Query: 262 -------QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
                  Q      D  + +  ++ LC++G I++A +L   L       DIR YN LI+G
Sbjct: 476 SLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILING 535

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            CK G +  A++LF+ +     + D VTY  +I  L   G+ + A ++F  M  K
Sbjct: 536 FCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKK 590



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 189/378 (50%), Gaps = 19/378 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  +R F C+P++F +N +++ L R    ++AL ++ +M   N        P+ V
Sbjct: 146 KAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN------LNPDVV 199

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCK      A  LF +M D  I PN + Y+ ++ G C A    +A+ LF +M
Sbjct: 200 TYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM 259

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   +++++NV++N  CK+G +D+A  LL+L+ + G       Y  L++G     R 
Sbjct: 260 RASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRY 319

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A   +  M     K +V  Y+I+I G  +   +  AL+L  EM  +G++PD + YN L
Sbjct: 320 EEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  ++ A  L  E+ +H    +   Y   I G+CKNG I +A  +F+ +  L  
Sbjct: 380 IKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGC 439

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAW------------ELFRSLPRGV-LIADVVTYNIMIH 348
              +  +N LI+GLCK+ RL+ A              LF  L +G   + D+ +  +M+ 
Sbjct: 440 LPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMME 499

Query: 349 ALCADGKMDKARDLFLDM 366
            LC  G + KA  L + +
Sbjct: 500 RLCESGMILKAYKLLMQL 517



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 167/314 (53%), Gaps = 4/314 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           CKP+   +  I+  L ++     A  ++ +M   N+NP+VVTY  LIHG C      +A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM D+G+ PN + ++++++ LC+  K+ +A RL   M   G   +   YN L++GF
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C +G ++ A  L   +   G    V  Y  LING  + +  E A   Y +ML + IKPDV
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           ++Y  +  GL +  +V  A  L  EM   G+  DT  Y   I G C  GY+ EA  L   
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL--R 396

Query: 296 LRILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           L I K++   +   Y+ LI G+CK+G +  A  +F+ + +   +  VVT+N +I+ LC  
Sbjct: 397 LEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKA 456

Query: 354 GKMDKARDLFLDME 367
            ++++AR LF  ME
Sbjct: 457 NRLEEARLLFYQME 470



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 187/376 (49%), Gaps = 19/376 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+R  GC  ++ TYN L+NG C++G+   A  L + +       GV+      
Sbjct: 251 DAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVI------ 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I+GL +    ++A   + KM  ENI P+V+ Y  +I G        EA  L  EM
Sbjct: 305 GYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM 364

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+ + +N ++   C  G +DEA  L   + +    PN   Y+ L+ G C  G +
Sbjct: 365 TERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLI 424

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-----------LSKG 230
           N+A+ +F  ME +GC  +V +++ LING CK   +E A  L+ +M           LS+G
Sbjct: 425 NKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQG 484

Query: 231 IKP--DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
                D+     +   L E   + +A+KL  ++   GV  D   Y   I+G CK G I  
Sbjct: 485 TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNING 544

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A +LF+ +++  +  D   Y  LIDGL ++GR + A E+F  + +   + +  TY  ++ 
Sbjct: 545 AFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604

Query: 349 ALCADGKMDKARDLFL 364
             C +  +  A  +++
Sbjct: 605 WSCRENNISLALSVWM 620



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 168/321 (52%), Gaps = 26/321 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   + K+     +P+V  Y  +I GL + G    AL L  EM     E G+  +P+T+
Sbjct: 321 EAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT----ERGL--RPDTI 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C  G++D+A+ L L++   +  PN  TY+ LI G C     N+A+ +F EM
Sbjct: 375 CYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV-------------- 167
              G  P+VV+FN ++N LCK  +++EA RLL   ++I  +P+ F+              
Sbjct: 435 EKLGCLPSVVTFNSLINGLCKANRLEEA-RLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
              +M+  C +G + +A +L + +   G   ++ +Y+ILING+CK   I GA  L+ EM 
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ 553

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            KG  PD V Y TL  GL+   + E A ++F++M + G   ++  Y+T +   C+   I 
Sbjct: 554 LKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNIS 613

Query: 288 EAVELFRTLRILKYELDIRAY 308
            A+ ++     +KY  D R +
Sbjct: 614 LALSVW-----MKYLRDFRGW 629



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 154/374 (41%), Gaps = 88/374 (23%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+   YN LI G C  G+   A +L  E++  +      C PN  
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD------CFPNNH 409

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I G+CK G ++KA+ +F +M+     P+VVT+NSLI+G C AN   EA+ LF +M
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 122 ------------------------------------------------MDQGVQPNVVSF 133
                                                           +D GV P++ ++
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N  CK G ++ A +L + M   G  P++  Y TL+DG    GR   A E+F  M  
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK 589

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLY-----------------------SEMLSKG 230
            GC     +Y  ++   C+   I  ALS++                       +E L   
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTA 649

Query: 231 IKP-----------DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           I+            D+  Y    IGL +  +   AF +F  ++   +   + +    I  
Sbjct: 650 IRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGR 709

Query: 280 LCKNGYIVEAVELF 293
           LC    +  A+++F
Sbjct: 710 LCMVENLDMAMDVF 723



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 143/337 (42%), Gaps = 35/337 (10%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           II  L KE   +   ++  ++K+  I  +   ++ LI  +  A    +A   F  M D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +P++ +FN+I++ L +      A  +   M++  + P+   Y  L+ G C T +   A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF--- 242
            LF  M   G   N   YSI+++G C+ K+I  A  L+S+M + G   D++ YN L    
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 243 --------------------------------IGLFEIHQVERAFKLFDEMQRHGVAADT 270
                                            GLF   + E A   + +M R  +  D 
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I GL + G + EA+ L   +       D   YN LI G C  G L  A  L   
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + +     +  TY+I+I  +C +G ++KA+ +F +ME
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 119/233 (51%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++I+ +L K    +   ++L+ +    ++ ++  ++ L++ +   G   +A E F  M  
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRD 156

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             CK ++F+++++++   + +    AL++Y++ML   + PDVV Y  L  GL +  + + 
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LFDEM   G+  +   Y   + GLC+   I +A  LF  +R      D+  YN L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G CKSG L  A+ L + L +   I  V+ Y  +I+ L    + ++A   +  M
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 126/276 (45%), Gaps = 29/276 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPN 59
           ++A  L M+L   G  P++ TYN LING C+ G+   A  LF+EM   G+        P+
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH-------MPD 560

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +VTY T+IDGL + G  + A E+F +M  +   P   TY +++   C  N+ + A  +++
Sbjct: 561 SVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWM 620

Query: 120 EMM-------DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF---VYN 169
           + +       D+ V+    SF+        N ++  A R L   +++ ++   F    Y 
Sbjct: 621 KYLRDFRGWEDEKVRVVAESFD--------NEELQTAIRRL---LEMDIKSKNFDLAPYT 669

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
             + G     R   A  +F  ++      +  S  +LI   C  + ++ A+ ++   L +
Sbjct: 670 IFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGRLCMVENLDMAMDVFLFTLER 729

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           G +    I N L   L  + + + A  L + M+  G
Sbjct: 730 GFRLMPPICNQLLCNLLHLDRKDDALFLANRMEASG 765



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 4/156 (2%)

Query: 217 EGALSLY----SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           E A  LY     E+ +  IK     ++ L     E    E+A + F  M+      D +A
Sbjct: 106 ENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFA 165

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           +   +  L +    + A+ ++  +       D+  Y  LI GLCK+ + + A  LF  + 
Sbjct: 166 FNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMT 225

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
              ++ + + Y+I++  LC   K+  A+ LF  M A
Sbjct: 226 DRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRA 261


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  190 bits (483), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 208/415 (50%), Gaps = 54/415 (13%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A++ ++      P+V TY  LI+GLC+T  T  AL LF+EM +     G++  PN + 
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDR----GIL--PNQII 235

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC---YAND--------- 110
           Y+ ++ GLC+   +  A+ LF KM+    N +++TYN L++GFC   Y +D         
Sbjct: 236 YSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLT 295

Query: 111 -----------------------WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
                                  + EA   + +M+ + ++P+V+ + +++  L + G++ 
Sbjct: 296 KDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVT 355

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           EA  LL  M + G+RP+   YN L+ GFC  G ++ AE L + +    C  N  +YSILI
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILI 415

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM------ 261
            G CKN  I  A  ++ EM   G  P VV +N+L  GL + +++E A  LF +M      
Sbjct: 416 CGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKP 475

Query: 262 -------QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
                  Q      D  + +  ++ LC++G I++A +L   L       DIR YN LI+G
Sbjct: 476 SLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILING 535

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            CK G +  A++LF+ +     + D VTY  +I  L   G+ + A ++F  M  K
Sbjct: 536 FCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKK 590



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/378 (29%), Positives = 189/378 (50%), Gaps = 19/378 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  +R F C+P++F +N +++ L R    ++AL ++ +M   N        P+ V
Sbjct: 146 KAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCN------LNPDVV 199

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I GLCK      A  LF +M D  I PN + Y+ ++ G C A    +A+ LF +M
Sbjct: 200 TYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKM 259

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G   +++++NV++N  CK+G +D+A  LL+L+ + G       Y  L++G     R 
Sbjct: 260 RASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRY 319

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A   +  M     K +V  Y+I+I G  +   +  AL+L  EM  +G++PD + YN L
Sbjct: 320 EEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNAL 379

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  ++ A  L  E+ +H    +   Y   I G+CKNG I +A  +F+ +  L  
Sbjct: 380 IKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGC 439

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAW------------ELFRSLPRGV-LIADVVTYNIMIH 348
              +  +N LI+GLCK+ RL+ A              LF  L +G   + D+ +  +M+ 
Sbjct: 440 LPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMME 499

Query: 349 ALCADGKMDKARDLFLDM 366
            LC  G + KA  L + +
Sbjct: 500 RLCESGMILKAYKLLMQL 517



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/314 (34%), Positives = 167/314 (53%), Gaps = 4/314 (1%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           CKP+   +  I+  L ++     A  ++ +M   N+NP+VVTY  LIHG C      +A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM D+G+ PN + ++++++ LC+  K+ +A RL   M   G   +   YN L++GF
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C +G ++ A  L   +   G    V  Y  LING  + +  E A   Y +ML + IKPDV
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           ++Y  +  GL +  +V  A  L  EM   G+  DT  Y   I G C  GY+ EA  L   
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESL--R 396

Query: 296 LRILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           L I K++   +   Y+ LI G+CK+G +  A  +F+ + +   +  VVT+N +I+ LC  
Sbjct: 397 LEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKA 456

Query: 354 GKMDKARDLFLDME 367
            ++++AR LF  ME
Sbjct: 457 NRLEEARLLFYQME 470



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 187/376 (49%), Gaps = 19/376 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+R  GC  ++ TYN L+NG C++G+   A  L + +       GV+      
Sbjct: 251 DAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVI------ 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I+GL +    ++A   + KM  ENI P+V+ Y  +I G        EA  L  EM
Sbjct: 305 GYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEM 364

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P+ + +N ++   C  G +DEA  L   + +    PN   Y+ L+ G C  G +
Sbjct: 365 TERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLI 424

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-----------LSKG 230
           N+A+ +F  ME +GC  +V +++ LING CK   +E A  L+ +M           LS+G
Sbjct: 425 NKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQG 484

Query: 231 IKP--DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
                D+     +   L E   + +A+KL  ++   GV  D   Y   I+G CK G I  
Sbjct: 485 TDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNING 544

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIH 348
           A +LF+ +++  +  D   Y  LIDGL ++GR + A E+F  + +   + +  TY  ++ 
Sbjct: 545 AFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMT 604

Query: 349 ALCADGKMDKARDLFL 364
             C +  +  A  +++
Sbjct: 605 WSCRENNISLALSVWM 620



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 168/321 (52%), Gaps = 26/321 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   + K+     +P+V  Y  +I GL + G    AL L  EM     E G+  +P+T+
Sbjct: 321 EAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMT----ERGL--RPDTI 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C  G++D+A+ L L++   +  PN  TY+ LI G C     N+A+ +F EM
Sbjct: 375 CYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEM 434

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV-------------- 167
              G  P+VV+FN ++N LCK  +++EA RLL   ++I  +P+ F+              
Sbjct: 435 EKLGCLPSVVTFNSLINGLCKANRLEEA-RLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
              +M+  C +G + +A +L + +   G   ++ +Y+ILING+CK   I GA  L+ EM 
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ 553

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            KG  PD V Y TL  GL+   + E A ++F++M + G   ++  Y+T +   C+   I 
Sbjct: 554 LKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNIS 613

Query: 288 EAVELFRTLRILKYELDIRAY 308
            A+ ++     +KY  D R +
Sbjct: 614 LALSVW-----MKYLRDFRGW 629



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 154/374 (41%), Gaps = 88/374 (23%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+   YN LI G C  G+   A +L  E++  +      C PN  
Sbjct: 356 EALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHD------CFPNNH 409

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I G+CK G ++KA+ +F +M+     P+VVT+NSLI+G C AN   EA+ LF +M
Sbjct: 410 TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQM 469

Query: 122 ------------------------------------------------MDQGVQPNVVSF 133
                                                           +D GV P++ ++
Sbjct: 470 EIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTY 529

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N  CK G ++ A +L + M   G  P++  Y TL+DG    GR   A E+F  M  
Sbjct: 530 NILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVK 589

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLY-----------------------SEMLSKG 230
            GC     +Y  ++   C+   I  ALS++                       +E L   
Sbjct: 590 KGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRVVAESFDNEELQTA 649

Query: 231 IKP-----------DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           I+            D+  Y    IGL +  +   AF +F  ++   +   + +    I  
Sbjct: 650 IRRLLEMDIKSKNFDLAPYTIFLIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVMLIGR 709

Query: 280 LCKNGYIVEAVELF 293
           LC    +  A+++F
Sbjct: 710 LCMVENLDMAMDVF 723



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 143/337 (42%), Gaps = 35/337 (10%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           II  L KE   +   ++  ++K+  I  +   ++ LI  +  A    +A   F  M D  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +P++ +FN+I++ L +      A  +   M++  + P+   Y  L+ G C T +   A 
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF--- 242
            LF  M   G   N   YSI+++G C+ K+I  A  L+S+M + G   D++ YN L    
Sbjct: 219 VLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGF 278

Query: 243 --------------------------------IGLFEIHQVERAFKLFDEMQRHGVAADT 270
                                            GLF   + E A   + +M R  +  D 
Sbjct: 279 CKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDV 338

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I GL + G + EA+ L   +       D   YN LI G C  G L  A  L   
Sbjct: 339 MLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLE 398

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + +     +  TY+I+I  +C +G ++KA+ +F +ME
Sbjct: 399 ISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 119/233 (51%)

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++I+ +L K    +   ++L+ +    ++ ++  ++ L++ +   G   +A E F  M  
Sbjct: 97  DLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRD 156

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
             CK ++F+++++++   + +    AL++Y++ML   + PDVV Y  L  GL +  + + 
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  LFDEM   G+  +   Y   + GLC+   I +A  LF  +R      D+  YN L++
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G CKSG L  A+ L + L +   I  V+ Y  +I+ L    + ++A   +  M
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKM 329



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 129/279 (46%), Gaps = 33/279 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPN 59
           ++A  L M+L   G  P++ TYN LING C+ G+   A  LF+EM   G+        P+
Sbjct: 508 LKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGH-------MPD 560

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           +VTY T+IDGL + G  + A E+F +M  +   P   TY +++   C  N+ + A  +++
Sbjct: 561 SVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWM 620

Query: 120 EMM-------DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF---VYN 169
           + +       D+ V+    SF+        N ++  A R L   +++ ++   F    Y 
Sbjct: 621 KYLRDFRGWEDEKVRVVAESFD--------NEELQTAIRRL---LEMDIKSKNFDLAPYT 669

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS--ILINGYCKNKEIEGALSLYSEML 227
             + G     R   A  +F  ++    K N+ S S  +LI   C  + ++ A+ ++   L
Sbjct: 670 IFLIGLVQAKRDCEAFAIFSVLKDF--KMNISSASCVMLIGRLCMVENLDMAMDVFLFTL 727

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            +G +    I N L   L  + + + A  L + M+  G 
Sbjct: 728 ERGFRLMPPICNQLLCNLLHLDRKDDALFLANRMEASGT 766



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 68/157 (43%), Gaps = 4/157 (2%)

Query: 217 EGALSLY----SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
           E A  LY     E+ +  IK     ++ L     E    E+A + F  M+      D +A
Sbjct: 106 ENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFA 165

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           +   +  L +    + A+ ++  +       D+  Y  LI GLCK+ + + A  LF  + 
Sbjct: 166 FNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMT 225

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              ++ + + Y+I++  LC   K+  A+ LF  M A 
Sbjct: 226 DRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRAS 262


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 188/371 (50%), Gaps = 8/371 (2%)

Query: 1   MEAAALFMKLRVFGCEPNV--FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           + AAA  +   +  C  +V   + + +++G C++G    A  L +E+          C  
Sbjct: 128 LPAAADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACC-- 185

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
               Y +++D   ++   D    L  +M++  + P V TY  L+ G   A D ++ + ++
Sbjct: 186 ----YNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVY 241

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  + V  +V  ++ ++N  C+ G +  AS + +  +  GV PN   Y  L++GFC  
Sbjct: 242 DEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKI 301

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++  AE L   M+  G  HN   ++ +I+GYC++  +E AL + + M   GI+ D+  Y
Sbjct: 302 GQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTY 361

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  GL  ++++E A KL   M   GVA +  +Y T I    K G +VEA  LFR +  
Sbjct: 362 NTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEG 421

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                 +  YN +IDG  K+G ++ A    + + +  L+ D+ TY  ++H  C +GK+D 
Sbjct: 422 KGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDV 481

Query: 359 ARDLFLDMEAK 369
           A  LF +M+ +
Sbjct: 482 ALRLFEEMKHR 492



 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 179/354 (50%), Gaps = 6/354 (1%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           A L  ++   G EP V TY  L++GL R G       +++EM   N         +   Y
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKN------VAGDVYFY 256

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           + +I+  C+ G V +A E+F +     + PN  TY +LI+GFC       A+ L  +M  
Sbjct: 257 SAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQL 316

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +GV  N + FN +++  C++G +++A  +  +M ++G+  + + YNTL  G C   R+  
Sbjct: 317 RGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMED 376

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A++L   M   G   N  SY+ LI+ + K  ++  A  L+ +M  KG +P VV YN +  
Sbjct: 377 AKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMID 436

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G  +   +  A +   EM++ G+  D + Y   + G C NG +  A+ LF  ++    + 
Sbjct: 437 GYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKP 496

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           ++ AY  L+ GL K GR + A++L+  +    L  D   Y++++ +L  D + D
Sbjct: 497 NVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 184/371 (49%), Gaps = 14/371 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +L   G   N   YN+L++   R  +      L +EM N   E      P   
Sbjct: 166 DAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVE------PTVG 219

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGL + G + K + ++ +MK +N+  +V  Y+++I+ +C   +   A  +F E 
Sbjct: 220 TYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDEC 279

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  GV+PN  ++  ++N  CK G+++ A  LL  M   GV  N  V+NT++DG+C  G V
Sbjct: 280 VGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMV 339

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A E+   ME MG + ++++Y+ L  G C+   +E A  L   M  KG+ P+ V Y TL
Sbjct: 340 EKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTL 399

Query: 242 FIGLFEIHQVE----RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
                 IH  E     A +LF +M+  G       Y   IDG  KNG I EA    + + 
Sbjct: 400 I----SIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME 455

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 DI  Y  L+ G C +G++ +A  LF  +       +VV Y  ++  L  +G+ +
Sbjct: 456 KKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSE 515

Query: 358 KARDLFLDMEA 368
           +A  L+ DM A
Sbjct: 516 EAFQLYDDMLA 526



 Score = 79.3 bits (194), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   G  P+V TYN +I+G  + G    A    +EM     + G+V  P+ 
Sbjct: 410 VEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEME----KKGLV--PDI 463

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  ++ G C  G VD A  LF +MK     PNVV Y +L+ G        EA  L+ +
Sbjct: 464 YTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDD 523

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           M+  G+ P+   ++V++  L  + + D   R
Sbjct: 524 MLAAGLTPDDTLYSVLVGSLHTDSRKDPLPR 554


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/402 (30%), Positives = 190/402 (47%), Gaps = 45/402 (11%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF  +R    +P+V TY  L+NGLC++GH   AL + + M++   +   VC P+     T
Sbjct: 153 LFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSD---VC-PDIAILNT 208

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENIN---PNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           ++DGLCK G + +A  +F+  +  +++   PN VTYN L   FC   D   A  +   M 
Sbjct: 209 VVDGLCKIGRLQQAI-IFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARME 267

Query: 123 DQGVQPNVVSFNVIMNELCKNGKM------------------------------------ 146
            +GV PNV++ N I+  LC+ G++                                    
Sbjct: 268 KEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNN 327

Query: 147 -DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            D A  L   M   G RP+A +Y T++ G    GR+  A     SM+  G K +  +Y+I
Sbjct: 328 VDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNI 387

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI G+C+ K++  A  L  EM   G++PDV  YNTL  GL +        +L   M   G
Sbjct: 388 LIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDG 447

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
                  + T + G CK G   EA+ +FR++   + + +   YN LID LCKS  + +A 
Sbjct: 448 CQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAI 507

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +LF  +    + A+V TYN ++  L      +KA +L   M 
Sbjct: 508 KLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMR 549



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 172/357 (48%), Gaps = 12/357 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++  +N+L+  L R G+      LF  M + +       KP+ VTY  +++GLCK G V
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDAS------VKPDVVTYGILLNGLCKSGHV 182

Query: 77  DKAKELFLKMKD--ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD--QGVQPNVVS 132
             A ++  +M     ++ P++   N+++ G C      +A     E M    G  PN V+
Sbjct: 183 GDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVT 242

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N + +  C+ G +  A +++  M + GV PN    NT++ G C  GRV  A E F    
Sbjct: 243 YNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKR 302

Query: 193 SM--GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           ++    + N  +YS L + +     ++ A+ L+ EM   G +PD V+Y T+  GL +  +
Sbjct: 303 TVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGR 362

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           +  A      M++ G   D  AY   I G C+   + EA EL   ++ +  + D+  YN 
Sbjct: 363 LLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNT 422

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L+ GLCK+G      EL   +        VVT+  ++H  C  GK D+A  +F  M+
Sbjct: 423 LLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMD 479



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 181/363 (49%), Gaps = 11/363 (3%)

Query: 1   MEAAALFMKLR---VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK 57
           ++ A +F+  R   V GC PN  TYN L +  CR G   +A  +   M     + GV   
Sbjct: 219 LQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARME----KEGVA-- 272

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKD--ENINPNVVTYNSLIHGFCYANDWNEAK 115
           PN +T  TII GLC+ G V  A E F + +        N VTY++L   F + N+ + A 
Sbjct: 273 PNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAM 332

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            LF EM D G +P+ V +  +++ L + G++ +A      M + G + +A  YN L+ GF
Sbjct: 333 ELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGF 392

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   +++ A EL   M+ +G + +V++Y+ L++G CK  +      L   M+  G +P V
Sbjct: 393 CRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSV 452

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V + TL  G  +  + + A ++F  M    +  +T  Y T ID LCK+  +  A++LF  
Sbjct: 453 VTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDE 512

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +R      ++  YN L+ GL      + A+EL   +       + VT ++++  L   G+
Sbjct: 513 MREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGE 572

Query: 356 MDK 358
            ++
Sbjct: 573 TER 575



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 83/187 (44%), Gaps = 7/187 (3%)

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNK---EIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             S+ S+  +H +   S L+      +     E A  L   + S    PD+ I+N+L   
Sbjct: 81  LASLHSLAARHRIPPPSALLLSKLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTA 140

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL- 303
           L     +    +LF  M+   V  D   Y   ++GLCK+G++ +A+++   +     ++ 
Sbjct: 141 LGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVC 200

Query: 304 -DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV--LIADVVTYNIMIHALCADGKMDKAR 360
            DI   N ++DGLCK GRL+ A        R V     + VTYN +  A C  G +  A 
Sbjct: 201 PDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMAC 260

Query: 361 DLFLDME 367
            +   ME
Sbjct: 261 KIVARME 267



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 7/123 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +     +PN   YNTLI+ LC++    VA+ LF+EM   N         N  
Sbjct: 470 EALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKN------VPANVT 523

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GL  +   +KA EL  +M++E   PN VT + L+       +    KC F++ 
Sbjct: 524 TYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKC-FMQQ 582

Query: 122 MDQ 124
            DQ
Sbjct: 583 RDQ 585


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/363 (31%), Positives = 187/363 (51%), Gaps = 7/363 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F +L+ F    N  +YN LIN  C+T     A+ LF EM          C P+T 
Sbjct: 84  KAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFGEMKAPG------CAPSTS 137

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I GLC+   + +A++ + ++       + +TYN L+ GFC A+   EA  L  E+
Sbjct: 138 TYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKADRVPEAVELLNEL 197

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G       +N I++ L K GK+ EA      M + GVRP    +  L+DG C   RV
Sbjct: 198 VARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRV 257

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA+E+F S    G   +V   S L++G+CK   ++ A  ++  M ++G  P+ V  N L
Sbjct: 258 ARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNIL 317

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  ++ +A ++F+E+ +     D   Y TF+DGLC+   + +A ++   L     
Sbjct: 318 INGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGG 377

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA-DVVTYNIMIHALCADGKMDKAR 360
             D+  Y  LI GLC  GRL  A ++F    R    A +  T N++++     G++D+AR
Sbjct: 378 TPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEAR 437

Query: 361 DLF 363
           +LF
Sbjct: 438 ELF 440



 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/358 (33%), Positives = 179/358 (50%), Gaps = 27/358 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  LF +++  GC P+  TYNTLI GLCR      A   +E + ++G G        + 
Sbjct: 119 EAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAG-------ASF 171

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY  ++DG CK   V +A EL  ++           YN +I         +EA+  F  
Sbjct: 172 ITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNR 231

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV+P  V+F V+++ LCK  ++  A  +    ++ G  P+  + + LMDGFC  G 
Sbjct: 232 MEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGG 291

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  +F  M + GC  N  S +ILING CK K +  A  ++ E++ +  KPDVV Y+T
Sbjct: 292 VDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYST 351

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
              GL   H+V++A ++   +   G   D   Y   I GLC  G + EA ++F       
Sbjct: 352 FMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVF------- 404

Query: 301 YELDIRAYNC---------LIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIH 348
            E+D+RA  C         L++G   +GRL  A ELF R + RGV   D  T++ M +
Sbjct: 405 -EVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQ-PDCRTFSAMAN 460



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/347 (29%), Positives = 179/347 (51%), Gaps = 7/347 (2%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
           N  I+ LC++     A + F+E+ +  G        NTV+Y  +I+  CK   +D+A +L
Sbjct: 70  NITIDSLCKSDMIDKAESWFQELKDFRGLV------NTVSYNILINAFCKTKRIDEAIQL 123

Query: 83  FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK 142
           F +MK     P+  TYN+LI G C      EA+  +  ++  G   + +++N++++  CK
Sbjct: 124 FGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCK 183

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
             ++ EA  LL  ++  G    +  YN ++D     G+++ AE  F  ME  G +    +
Sbjct: 184 ADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVT 243

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           +++LI+G CK   +  A  ++   L  G  P VVI + L  G  +   V+ A+++F+ M 
Sbjct: 244 FTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWRIFELMT 303

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
             G   +  +    I+GLCK   + +A E+F  +   + + D+  Y+  +DGLC++ R+ 
Sbjct: 304 NRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLCRAHRVD 363

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF-LDMEA 368
            A ++   L       DVV Y  +I  LC+ G++D+AR +F +DM A
Sbjct: 364 QARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRA 410



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 128/260 (49%), Gaps = 3/260 (1%)

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C+    +EA  LF  ++  G     +  ++++ EL K G+ +E  ++++LM+       
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
             + N  +D  C +  +++AE  F  ++      N  SY+ILIN +CK K I+ A+ L+ 
Sbjct: 66  RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           EM + G  P    YNTL  GL  + ++  A + ++ +   G  A    Y   +DG CK  
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + EAVEL   L      +    YNC+ID L K G++  A   F  + +  +    VT+ 
Sbjct: 186 RVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGVRPQEVTFT 245

Query: 345 IMIHALCADGKMDKARDLFL 364
           ++I  LC   ++ +A+++F 
Sbjct: 246 VLIDGLCKANRVARAKEIFF 265



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 3/195 (1%)

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C  G+++ A ELF S+ S GC        +L+    K    E  L +   ML +    +
Sbjct: 9   LCHVGKLDEALELFHSLVSDGCG---LPADLLVRELSKAGRAEECLKVVKLMLDRQQLRE 65

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
             + N     L +   +++A   F E++      +T +Y   I+  CK   I EA++LF 
Sbjct: 66  RHLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEAIQLFG 125

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++          YN LI GLC+  RL  A + +  L      A  +TYNI++   C   
Sbjct: 126 EMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDGFCKAD 185

Query: 355 KMDKARDLFLDMEAK 369
           ++ +A +L  ++ A+
Sbjct: 186 RVPEAVELLNELVAR 200


>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 663

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 182/350 (52%), Gaps = 6/350 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FTY+  I+ LC++      + L +E+     + G  C P+       I  LCK+  +  A
Sbjct: 229 FTYSRWISALCQSNR----IELVQELLVDMDKLG--CSPDIWACNIYIYYLCKQNRLPDA 282

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            ++  KM+ +  +P+VVTY +++ G C    + EA  L+ EM+ + ++P+V S   ++  
Sbjct: 283 LQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFG 342

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LCKN K+DEA  L   M+ + +  +  +YN L+ GF   G +++A ++   M + GC+ +
Sbjct: 343 LCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPD 402

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           + +Y+IL+N YC    +E A  L  +M + G+ PD   YN L  GL + HQ+++AF    
Sbjct: 403 IVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVS 462

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           +    G   DT +    ID  CK   +  A+ELF+ +     + D   Y  LI+GL   G
Sbjct: 463 DHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVG 522

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +A ELF  +    +  +V  YNIM+H LC  G   +A+ +F  M  K
Sbjct: 523 YYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQK 572



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 186/362 (51%), Gaps = 6/362 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  K+R  G  P+V TY T+++GLC       A+ L+EEM   +       KP+  
Sbjct: 281 DALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRD------LKPDVF 334

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +   +I GLCK   VD+A EL  +M   +I  +V  YN+LI GF  A   ++A  +   M
Sbjct: 335 SCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFM 394

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P++V++N+++N  C  G M++A +L+  M   GV P+ + YN L+ G C T ++
Sbjct: 395 RTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQL 454

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A         +G   +  S +ILI+ +CK K+++ AL L+ EM  KG++ D V Y TL
Sbjct: 455 DKAFAFVSDHMEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTL 514

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF +     A +LF++M    +  +   Y   +  LCK G+   A  +F  +   + 
Sbjct: 515 INGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEV 574

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +N LI  L K  R   A  LF+ +    +  D +T+  +I  L  +GK   A +
Sbjct: 575 SPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYE 634

Query: 362 LF 363
           ++
Sbjct: 635 VW 636



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/364 (29%), Positives = 182/364 (50%), Gaps = 6/364 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L + +   GC P+++  N  I  LC+      AL + E+M            P+ VTY T
Sbjct: 250 LLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKG------TSPDVVTYQT 303

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++ GLC      +A  L+ +M   ++ P+V +  +LI G C  N  +EA  L   M+   
Sbjct: 304 VVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLD 363

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ +V  +N +++   + G +D+A +++  M   G  P+   YN L++ +C  G + +AE
Sbjct: 364 IELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAE 423

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +L   ME+ G   + +SY+ L+ G CK  +++ A +  S+ +  G   D V  N L    
Sbjct: 424 KLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILIDAF 483

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  +V+ A +LF EM   G+ AD   Y T I+GL   GY   A ELF  +   + + ++
Sbjct: 484 CKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNV 543

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN ++  LCK G  K A  +F  + +  +  D VT+N +I+ L    +  +A +LF D
Sbjct: 544 NLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKD 603

Query: 366 MEAK 369
           M  +
Sbjct: 604 MRTR 607



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 140/288 (48%)

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           E   ++K + +  +   Y  L+ G+  A  ++     F EM+  G +   V +N  +  L
Sbjct: 144 EFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIETFDEMVMSGCREFGVDYNRYIGVL 203

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            KN   D   +  ++ +  G     F Y+  +   C + R+   +EL V M+ +GC  ++
Sbjct: 204 VKNCCFDLVEKYYDMALAKGFCLTPFTYSRWISALCQSNRIELVQELLVDMDKLGCSPDI 263

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
           ++ +I I   CK   +  AL +  +M +KG  PDVV Y T+  GL +  +   A  L++E
Sbjct: 264 WACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPDVVTYQTVVSGLCDNKKFAEAIGLWEE 323

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M +  +  D ++    I GLCKN  + EA EL   +  L  EL +  YN LI G  ++G 
Sbjct: 324 MVKRDLKPDVFSCGALIFGLCKNNKVDEAFELASRMLTLDIELSVCIYNALISGFWRAGS 383

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +  A+++   +       D+VTYNI+++  C  G M+KA  L   ME 
Sbjct: 384 IDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKMET 431



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 143/303 (47%), Gaps = 41/303 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++     E +V  YN LI+G  R G    A  +   M   NG     C+P+ V
Sbjct: 351 EAFELASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRT-NG-----CEPDIV 404

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++  C  G ++KA++L  KM+   +NP+  +YN L+ G C  +  ++A     + 
Sbjct: 405 TYNILLNHYCTIGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDH 464

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M+ G   + VS N++++  CK  K+  A  L + M   G++ +A  Y TL++G    G  
Sbjct: 465 MEVGGFCDTVSCNILIDAFCKTKKVKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYY 524

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK---------------NKEIEG-------- 218
           N AEELF  M +     NV  Y+I+++  CK                KE+          
Sbjct: 525 NLAEELFEQMLNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTL 584

Query: 219 ------------ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                       AL+L+ +M ++G++PD + +  L  GL +  +   A+++++ M  +G+
Sbjct: 585 IYWLGKRSRAIEALNLFKDMRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGI 644

Query: 267 AAD 269
             D
Sbjct: 645 ILD 647



 Score = 61.2 bits (147), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 54/249 (21%), Positives = 100/249 (40%), Gaps = 42/249 (16%)

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G   + F    L+    + G      E    ++S G   +   Y IL++GY +  + +  
Sbjct: 118 GFDHSQFAIAYLVSLLFMDGNFALLSEFLGRVKSQGVALHRSLYRILLSGYVRAGKFDSV 177

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLF--------------------------------- 246
           +  + EM+  G +   V YN  +IG+                                  
Sbjct: 178 IETFDEMVMSGCREFGVDYNR-YIGVLVKNCCFDLVEKYYDMALAKGFCLTPFTYSRWIS 236

Query: 247 ---EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
              + +++E   +L  +M + G + D WA   +I  LCK   + +A+++   +R      
Sbjct: 237 ALCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSP 296

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA---- 359
           D+  Y  ++ GLC + +   A  L+  + +  L  DV +   +I  LC + K+D+A    
Sbjct: 297 DVVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEAFELA 356

Query: 360 -RDLFLDME 367
            R L LD+E
Sbjct: 357 SRMLTLDIE 365


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/352 (32%), Positives = 177/352 (50%), Gaps = 15/352 (4%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           NV TY  LI+G CR+G    AL L   M            P+T TY T++ GLC     +
Sbjct: 183 NVVTYTALIDGYCRSGRLADALRLIASMP---------VAPDTYTYNTVLKGLCCAKQWE 233

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A+EL  +M   + +PN VT+ + I  FC     + A  L  +M   G  P+V+ ++ ++
Sbjct: 234 QAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLV 293

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           N   ++G++DEA +LL  M+    RPN   YN  + G C+ GR     EL   M    C 
Sbjct: 294 NGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCP 350

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  ++S LIN  C+N+ +E A+ +  +M   G  PDVV YNT+     +  + + A KL
Sbjct: 351 PNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKL 410

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
              M       DT ++   +  LCK     +AVEL   +      ++   +N LID LC+
Sbjct: 411 LKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQ 467

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +G++K A E+F  +P+   + D+VTY+ +I+     G  + A DLF  M  +
Sbjct: 468 NGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCR 519



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 174/350 (49%), Gaps = 15/350 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ +TYNT++ GLC       A  L  EM   +      C PN VT+ T I   C+ G +
Sbjct: 214 PDTYTYNTVLKGLCCAKQWEQAEELMREMIRNS------CHPNEVTFATQIRAFCQNGLL 267

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+A EL  +M      P+V+ Y++L++GF      +EA  L   M+    +PN V +N  
Sbjct: 268 DRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAA 324

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LC  G+ +E   L+  M++    PN   ++TL++  C    V  A E+   M+  G 
Sbjct: 325 LKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGY 384

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V SY+ +I+ +      + AL L   ML    KPD + +N +   L +  +   A +
Sbjct: 385 MPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVE 441

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L  +M +     +   +   ID LC+NG + +A+E+F  +   +   DI  Y+ LI+G  
Sbjct: 442 LVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFS 501

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + G  ++A++LFRS+P     AD+ +YN  +  LC   + D A +L  DM
Sbjct: 502 EQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADM 548



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 173/358 (48%), Gaps = 15/358 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  ++  +GC P+V  Y+TL+NG    G    AL L   M         +C+PNTV
Sbjct: 269 RAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTM---------LCRPNTV 319

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   + GLC  G  ++  EL  +M  ++  PN  T+++LI+  C       A  +  +M
Sbjct: 320 CYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQM 379

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VVS+N I++      + D+A +LL+ M+    +P+   +N ++   C   R 
Sbjct: 380 QKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRW 436

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A EL   M    C+ N  +++ILI+  C+N +++ A+ ++  M      PD+V Y++L
Sbjct: 437 YDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSL 496

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  E    E AF LF  M      AD ++Y   + GLC      +A EL   +     
Sbjct: 497 INGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDC 553

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +   +N LI  LC+ G +  A +++  +P+  +  D+ TYN +I+     G++D A
Sbjct: 554 LPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 175/361 (48%), Gaps = 44/361 (12%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PN   YN  + GLC  G       L  EM   +      C PN  T++T+I+ LC+  
Sbjct: 314 CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKD------CPPNDATFSTLINSLCQNR 367

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGF----------------------------- 105
            V+ A E+  +M+     P+VV+YN++I  F                             
Sbjct: 368 LVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVL 427

Query: 106 ---CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
              C A  W +A  L  +M+ +  + N ++FN++++ LC+NG++ +A  + ELM +    
Sbjct: 428 KCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCM 487

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+   Y++L++GF   G    A +LF    SM C+ ++FSY+  + G C     + A  L
Sbjct: 488 PDIVTYSSLINGFSEQGLDEMAFDLF---RSMPCRADIFSYNATLKGLCMAARWDDAGEL 544

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
            ++M+++   P+ V +N L   L +   V RA  ++++M ++G+  D + Y   I+G  +
Sbjct: 545 IADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSE 604

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + +A++   T   +  E D  +YN ++ GLC++ R K A +L   + R     + VT
Sbjct: 605 QGRLDDALKFLST---MPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVT 661

Query: 343 Y 343
           +
Sbjct: 662 F 662



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 133/245 (54%), Gaps = 15/245 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K+    C  N  T+N LI+ LC+ G    A+ +FE M          C P+ V
Sbjct: 438 DAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYR------CMPDIV 491

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++I+G  ++G  + A +LF  M       ++ +YN+ + G C A  W++A  L  +M
Sbjct: 492 TYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADM 548

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN V+FN++++ LC+ G ++ A  + E M + G+ P+ F YN L++G+   GR+
Sbjct: 549 VTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRL 608

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY--- 238
           + A +    + +M C+ +  SY+ ++ G C+ +  + A  L +EML K   P+ V +   
Sbjct: 609 DDALKF---LSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYA 665

Query: 239 NTLFI 243
           N LFI
Sbjct: 666 NQLFI 670



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 125/242 (51%), Gaps = 8/242 (3%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P V+S N+++ +LC   ++ +A R+LE +   G   +A  +NTL+ G+C  G +  AE +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERV 172

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
             +  + G   NV +Y+ LI+GYC++  +  AL L + M    + PD   YNT+  GL  
Sbjct: 173 VEAARASG-TANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGLCC 228

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             Q E+A +L  EM R+    +   + T I   C+NG +  AVEL   +       D+  
Sbjct: 229 AKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVII 288

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           Y+ L++G  + GR+  A +L  ++   +   + V YN  +  LC  G+ ++  +L  +M 
Sbjct: 289 YSTLVNGFSEHGRVDEALKLLNTM---LCRPNTVCYNAALKGLCIAGRWEEVGELIAEMV 345

Query: 368 AK 369
            K
Sbjct: 346 RK 347


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  189 bits (481), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 181/353 (51%), Gaps = 9/353 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+VF YN +I+G C+      A  + + M            P+ VT+  +I   C +G 
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKG------FSPDVVTHNIMIGTFCGKGK 94

Query: 76  VDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           +D A ++F + +KD N  P ++TY  LI  +      +EA  L  EM+ +G++P+  ++N
Sbjct: 95  IDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYN 154

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           VI   LCK GK+D A   +  +   G +P+   YN L+      G+ +  E+    + S 
Sbjct: 155 VITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSR 214

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC+ NV +YSILI+  C++ +IE +++L   M  KG+ PD   Y+ L        +++ A
Sbjct: 215 GCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMA 274

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +  D M   G   D   Y T +  LCKNG    AVE+F  L  +    ++ +YN ++  
Sbjct: 275 IEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSA 334

Query: 315 LCKSG-RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L  SG R +    + + L +G+   DV+TYN +I  LC DG +D+A  L  DM
Sbjct: 335 LWSSGDRYRALGMISQMLSKGI-DPDVITYNSLISCLCRDGMVDEAIGLLADM 386



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 182/348 (52%), Gaps = 6/348 (1%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C+P + TY  LI      G    AL L +EM +   E      P+T TY  I  GLCKEG
Sbjct: 111 CKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLE------PDTFTYNVITRGLCKEG 164

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD+A E    +      P+V+TYN L+        W+E +    E+  +G +PNVV+++
Sbjct: 165 KVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYS 224

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++++ LC++GK++E+  L+++M + G+ P+A+ Y+ L+  FC  G+++ A E    M   
Sbjct: 225 ILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICD 284

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   ++ +Y+ ++   CKN   + A+ ++ ++   G  P+V  YNT+   L+      RA
Sbjct: 285 GFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRA 344

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +  +M   G+  D   Y + I  LC++G + EA+ L   +   +++ +I +Y  ++ G
Sbjct: 345 LGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLG 404

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LCK+ R+  A E+  ++       +  TY ++I  +   G   +A +L
Sbjct: 405 LCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMEL 452



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 164/330 (49%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G EP+ FTYN +  GLC+ G    A   F    N  G     CKP+ +
Sbjct: 133 EALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFE-FVRTLNSRG-----CKPDVI 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++  L  +G  D+ ++   ++      PNVVTY+ LI   C      E+  L   M
Sbjct: 187 TYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+   ++ ++   C+ GK+D A   L+ MI  G  P+   YNT+M   C  G  
Sbjct: 247 KEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNG 306

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+F  ++ +GC  NV SY+ +++    + +   AL + S+MLSKGI PDV+ YN+L
Sbjct: 307 DHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSL 366

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L     V+ A  L  +M       +  +Y+T + GLCK   I +A+E+   +     
Sbjct: 367 ISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGC 426

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           + +   Y  LI+G+  SG    A EL  SL
Sbjct: 427 QPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 161/314 (51%), Gaps = 1/314 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           KP+   Y  +I G CK   ++ AK +  +MK +  +P+VVT+N +I  FC     + A  
Sbjct: 41  KPDVFAYNAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALK 100

Query: 117 LFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
           +F E++ D   +P ++++ +++      G +DEA +LL+ M+  G+ P+ F YN +  G 
Sbjct: 101 VFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGL 160

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C  G+V+RA E   ++ S GCK +V +Y+IL+       + +      SE+ S+G +P+V
Sbjct: 161 CKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNV 220

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V Y+ L   L    ++E +  L   M+  G+  D + Y   I   C+ G +  A+E    
Sbjct: 221 VTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDC 280

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           +    +  DI  YN ++  LCK+G    A E+F  L       +V +YN M+ AL + G 
Sbjct: 281 MICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGD 340

Query: 356 MDKARDLFLDMEAK 369
             +A  +   M +K
Sbjct: 341 RYRALGMISQMLSK 354



 Score =  159 bits (401), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 150/286 (52%), Gaps = 6/286 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+P+V TYN L+  L   G          E+      F   C+PN VTY+ +I  LC++
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEI------FSRGCEPNVVTYSILISSLCRD 233

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++++  L   MK++ + P+   Y+ LI  FC     + A      M+  G  P++V++
Sbjct: 234 GKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNY 293

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N IM  LCKNG  D A  +   + ++G  PN   YNT++     +G   RA  +   M S
Sbjct: 294 NTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLS 353

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V +Y+ LI+  C++  ++ A+ L ++MLS   +P++V Y T+ +GL + H+++ 
Sbjct: 354 KGIDPDVITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDD 413

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           A ++   M  +G   +   Y   I+G+  +G   +A+EL  +L I+
Sbjct: 414 AIEVLAAMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSLYIM 459



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 150/314 (47%), Gaps = 37/314 (11%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M  ++  P+V+    LI GF  + + ++A    + ++++  +P+V ++N +++  CK  +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKAT-RVMGILEKHGKPDVFAYNAVISGFCKANR 59

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS-MESMGCKHNVFSYS 204
           ++ A  +L+ M + G  P+   +N ++  FC  G+++ A ++F   ++   CK  + +Y+
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILI  Y     I+ AL L  EMLS+G++PD   YN +  GL +  +V+RAF+    +   
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 265 GVAADT---------------W--------------------AYRTFIDGLCKNGYIVEA 289
           G   D                W                     Y   I  LC++G I E+
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           V L + ++      D   Y+ LI   C+ G+L +A E    +     + D+V YN ++ A
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 350 LCADGKMDKARDLF 363
           LC +G  D A ++F
Sbjct: 300 LCKNGNGDHAVEIF 313


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 185/416 (44%), Gaps = 54/416 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F ++  F C P  F YN +   L   G  ++AL L+  M +        C PN+ 
Sbjct: 162 EAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSG------CLPNST 215

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++DGLCK G    A ++F +M +  I P+V  Y  L+   C      +A  L   M
Sbjct: 216 TYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSM 275

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P+ V++ V ++ LCK G++DEA    EL+   G       Y+ L+DG    GR 
Sbjct: 276 KENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRF 335

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +     +  M       ++  Y+ILI  + +    + A  L  EM  KG  PD   YNTL
Sbjct: 336 DEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTL 395

Query: 242 FIGLFEIHQVERA-----------------------------------FKLFDEMQRHGV 266
              LF++  ++RA                                    ++FDEM  HG 
Sbjct: 396 LKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGC 455

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-------LKYEL------DIRAYNCLID 313
                 Y   IDGL + G + EA  LF  + +       L+  L      D  +   L+D
Sbjct: 456 HPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVD 515

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G+C+SG++  A++L R +    ++ DVVTYN +I+ LC    +D A  LF +++ K
Sbjct: 516 GMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLK 571



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/376 (30%), Positives = 184/376 (48%), Gaps = 19/376 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  +F ++   G  P+V  Y  L++ LC  G    A  L   M   NG     C P+ 
Sbjct: 231 VDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKE-NG-----CPPDE 284

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT  + GLCK G VD+A   F  ++D      ++ Y+ LI G   A  ++E    + E
Sbjct: 285 VTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTE 344

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ + + P++  + +++    + G+  +A  LL+ M   G  P+ F YNTL+      G 
Sbjct: 345 MLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGN 404

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++RA+ L   M       +  +++I+I G CK   I+ A+ ++ EM   G  P V+ YN 
Sbjct: 405 IDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNA 464

Query: 241 LFIGLFEIHQVERAFKLFDEMQ---------RHGVAA----DTWAYRTFIDGLCKNGYIV 287
           L  GL+    +E A  LF +M+         R  + A    DT + R  +DG+C++G ++
Sbjct: 465 LIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVL 524

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A +L R +       D+  YN LI+GLCK+  L  A  LF+ L    +  D +TY  +I
Sbjct: 525 KAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLI 584

Query: 348 HALCADGKMDKARDLF 363
             L    + + A  LF
Sbjct: 585 DGLWRAHRENDATMLF 600



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/369 (30%), Positives = 170/369 (46%), Gaps = 9/369 (2%)

Query: 2   EAAALFMKL---RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           +A A+F  L   R  G       +  L+      G    A+  F  M    G+F   C+P
Sbjct: 124 DAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRM----GDFD--CRP 177

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
               Y  +   L   G +  A  L+ +M      PN  TY  L+ G C      +A  +F
Sbjct: 178 TAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMF 237

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+++G+ P+V  + V+++ LC  G++++A RLL  M + G  P+   Y   + G C  
Sbjct: 238 DEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKA 297

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GRV+ A   F  ++  G    +  YS LI+G  +    +  LS Y+EML K I PD+ +Y
Sbjct: 298 GRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLY 357

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
             L     E  + + AF L DEM+  G   DT+ Y T +  L   G I  A  L   +  
Sbjct: 358 TILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQ 417

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
               LD   +N +I GLCK G +  A ++F  +        V+TYN +I  L   G +++
Sbjct: 418 NNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEE 477

Query: 359 ARDLFLDME 367
           AR LF  ME
Sbjct: 478 ARMLFHKME 486



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 155/319 (48%), Gaps = 27/319 (8%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P++  Y  LI      G T  A  L +EM +     G V  P+T  Y T++  L   G 
Sbjct: 351 SPDITLYTILIRRFAEAGRTKDAFLLLDEMKDK----GFV--PDTFCYNTLLKALFDVGN 404

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D+A+ L  +M   N+  +  T+N +I G C     ++A  +F EM + G  P V+++N 
Sbjct: 405 IDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNA 464

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL--------------MDGFCLTGRV 181
           +++ L + G ++EA R+L   +++G  P+ F+  TL              +DG C +G+V
Sbjct: 465 LIDGLYRAGMLEEA-RMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQV 523

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A +L   +   G   +V +Y+ LING CK K ++GAL L+ E+  KGI PD + Y TL
Sbjct: 524 LKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTL 583

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL+  H+   A  LF  + R G       Y T +  LC+   + +A+ L+      KY
Sbjct: 584 IDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKKY 643

Query: 302 ELD------IRAYNCLIDG 314
            L         A  C  DG
Sbjct: 644 NLSPEDEVIANARKCFEDG 662



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 112/245 (45%)

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+     +F  ++      G+  EA      M     RP AFVYN +       G +  A
Sbjct: 139 GLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVILLA 198

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L+  M S GC  N  +Y +L++G CK      AL ++ EML +GI PDV IY  L   
Sbjct: 199 LALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSS 258

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    ++E A +L   M+ +G   D   Y  F+ GLCK G + EA   F  L+   + L 
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  Y+CLIDGL ++GR       +  +    +  D+  Y I+I      G+   A  L  
Sbjct: 319 LIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLD 378

Query: 365 DMEAK 369
           +M+ K
Sbjct: 379 EMKDK 383



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 164/329 (49%), Gaps = 20/329 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE-------FGV 54
           +A  +F ++   GC P V TYN LI+GL R G    A  LF +M  GN          G 
Sbjct: 442 KAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGA 501

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
               +T +   ++DG+C+ G V KA +L   + +  + P+VVTYN+LI+G C A + + A
Sbjct: 502 NQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGA 561

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             LF E+  +G+ P+ +++  +++ L +  + ++A+ L + +++ G  P+  +YNT+M  
Sbjct: 562 LRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRS 621

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
            C   ++++A  L+  ++ +  K+N+     +I    K  E +G L    E + + IK D
Sbjct: 622 LCRMKKLSQAINLW--LDYLPKKYNLSPEDEVIANARKCFE-DGFL---DETVKELIKID 675

Query: 235 VVI-------YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            V        Y    IGL ++ +++ A ++F  ++  G+          I+ LC +  + 
Sbjct: 676 QVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLCWDRNLN 735

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLC 316
            AV++       ++ +     N L+  LC
Sbjct: 736 AAVDIMMYTLSKRFIVSQPVGNRLLRSLC 764


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/289 (37%), Positives = 159/289 (55%), Gaps = 9/289 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF K+   G +PNV TY TLINGLC+ G+T  A+ L   M  GN      C+P+ V
Sbjct: 133 EALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGN------CQPDVV 186

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT+IID LCK+  V +A  LF +M  + I+P++ TY SL+H  C   +W     L  +M
Sbjct: 187 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQM 246

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++  + P+VV F+ +++ LCK GK+ EA  ++++MIQ GV P+   Y TLMDG CL   +
Sbjct: 247 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 306

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  M   G   +V SY+ LIN     K+  G +SL   +      PD V    +
Sbjct: 307 DEAVKVFDMMVRKGFAPDVISYTTLINA--GKKDGGGLVSLQEVIGLVKETPDAVKGGAV 364

Query: 242 -FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
             I   ++   E+   L +EM    +  +   + T +D LCK G ++EA
Sbjct: 365 EVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 413



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 183/368 (49%), Gaps = 14/368 (3%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L  ++  FG  PNV+T N LIN  C       A ++  ++        +  +P+  T+T
Sbjct: 66  SLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI------LKLGHQPDPTTFT 119

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC EG + +A  LF KM DE   PNVVTY +LI+G C   + + A  L   M   
Sbjct: 120 TLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQG 179

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
             QP+VV +  I++ LCK+ ++ EA  L   M+  G+ P+ F Y +L+   C        
Sbjct: 180 NCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHV 239

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M +     +V  +S +++  CK  ++  A  +   M+ +G++PDVV Y TL  G
Sbjct: 240 TTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDG 299

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
                +++ A K+FD M R G A D  +Y T I+   K+G     V L   + ++K   D
Sbjct: 300 HCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGG--GLVSLQEVIGLVKETPD 357

Query: 305 IRAYNCLIDGLCKSGRLKI---AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 +   + +  ++K+      L   +    ++ +VV ++ ++ ALC +GK+ +A D
Sbjct: 358 AVKGGAV--EVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHD 415

Query: 362 LFLDMEAK 369
           + +DM  K
Sbjct: 416 V-VDMMIK 422



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/297 (29%), Positives = 149/297 (50%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ V +  ++  + K         L  +M    + PNV T N LI+ FC+ N    A  +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +++  G QP+  +F  ++  LC  GK+ EA  L + MI  G +PN   Y TL++G C 
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G  + A  L  SME   C+ +V  Y+ +I+  CK++++  A +L+S+M+ +GI PD+  
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y +L   L  + + +    L ++M    +  D   + T +D LCK G + EA E+   + 
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
               E D+  Y  L+DG C    +  A ++F  + R     DV++Y  +I+A   DG
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG 339



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 140/288 (48%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A   F ++   +  P++V +  L+        ++    L  +M   GV PNV + N+
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++N  C   ++  A  +L  ++++G +P+   + TL+ G C+ G++  A  LF  M   G
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            + NV +Y  LING CK      A+ L   M     +PDVVIY ++   L +  QV  AF
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 205

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            LF +M   G++ D + Y + +  LC          L   +   K   D+  ++ ++D L
Sbjct: 206 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 265

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           CK G++  A E+   + +  +  DVVTY  ++   C   +MD+A  +F
Sbjct: 266 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVF 313



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 128/263 (48%), Gaps = 7/263 (2%)

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRP 163
           + N  ++A   F  ++     P++V F  ++  +    KM   S +L L  Q+   GV P
Sbjct: 22  HFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSI---AKMKHYSTVLSLSTQMDSFGVPP 78

Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
           N +  N L++ FC   RV  A  +   +  +G + +  +++ LI G C   +I  AL L+
Sbjct: 79  NVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLF 138

Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
            +M+ +G +P+VV Y TL  GL ++     A +L   M++     D   Y + ID LCK+
Sbjct: 139 DKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKD 198

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
             + EA  LF  +       DI  Y  L+  LC     K    L   +    ++ DVV +
Sbjct: 199 RQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 258

Query: 344 NIMIHALCADGKMDKARDLFLDM 366
           + ++ ALC +GK+ +A ++ +DM
Sbjct: 259 STVVDALCKEGKVTEAHEI-VDM 280



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/232 (27%), Positives = 107/232 (46%), Gaps = 40/232 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++   G  P++FTY +L++ LC          L  +M N          P+ V
Sbjct: 203 EAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSK------ILPDVV 256

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            ++T++D LCKEG V +A E+   M    + P+VVTY +L+ G C  ++ +EA  +F  M
Sbjct: 257 IFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMM 316

Query: 122 MDQGVQPNVVSFNVIMNELCKNG---------------------------------KMDE 148
           + +G  P+V+S+  ++N   K+G                                 K+ E
Sbjct: 317 VRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFE 376

Query: 149 ASR-LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
             R LL  M+   + PN  +++T++D  C  G+V  A ++   M   G + N
Sbjct: 377 KGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPN 428



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 95/190 (50%), Gaps = 41/190 (21%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  ++T+++ LC+ G    A  + + M     E      P+ VTYTT++DG C +  +
Sbjct: 253 PDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE------PDVVTYTTLMDGHCLQSEM 306

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIH-------GFCYAND------------------- 110
           D+A ++F  M  +   P+V++Y +LI+       G     +                   
Sbjct: 307 DEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEV 366

Query: 111 --------WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
                   + + + L  EM++  + PNVV F+ +++ LCK GK+ EA  ++++MI+ GV 
Sbjct: 367 IRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 426

Query: 163 PNAF-VYNTL 171
           PNA  V++T+
Sbjct: 427 PNAVKVFDTM 436



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/152 (24%), Positives = 63/152 (41%)

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ ALS ++ +L     P +V +  L   + ++        L  +M   GV  + +    
Sbjct: 26  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 85

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+  C    +  A  +   +  L ++ D   +  LI GLC  G++  A  LF  +    
Sbjct: 86  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 145

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +VVTY  +I+ LC  G    A  L   ME
Sbjct: 146 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSME 177



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 40/152 (26%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID----- 68
           G EP+V TY TL++G C       A+ +F+ M            P+ ++YTT+I+     
Sbjct: 285 GVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG------FAPDVISYTTLINAGKKD 338

Query: 69  -----------GLCKEG------------------FVDKAKELFLKMKDENINPNVVTYN 99
                      GL KE                     +K + L  +M +  I PNVV ++
Sbjct: 339 GGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFS 398

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           +++   C      EA  +   M+ +GV+PN V
Sbjct: 399 TVVDALCKEGKVMEAHDVVDMMIKRGVEPNAV 430


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 193/390 (49%), Gaps = 29/390 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA---------------N 47
           A     +L++ G  P V TY  LING C+ G       L  EMA               +
Sbjct: 255 ATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVID 314

Query: 48  GNGEFGVV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
              ++G+V              C P+  TY T+I+  CK G + +A E   K K+  + P
Sbjct: 315 AEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLP 374

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N  +Y  L+H +C   D+ +A  +   + + G +P++VS+   ++ +  +G++D A  + 
Sbjct: 375 NKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVR 434

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           E M++ GV P+A +YN LM G C  GR    + L   M     + +V+ ++ L++G+ +N
Sbjct: 435 EKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRN 494

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            E++ A+ ++  ++ KG+ P +V YN +  G  +  ++  A    ++M+    A D + Y
Sbjct: 495 GELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTY 554

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            T IDG  K   +  A+++F  +   K++ ++  Y  LI+G CK   +  A ++FR +  
Sbjct: 555 STVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKS 614

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLF 363
             L+ +VVTY  ++      GK +KA  +F
Sbjct: 615 FDLVPNVVTYTTLVGGFFKAGKPEKATSIF 644



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 186/374 (49%), Gaps = 16/374 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA    ++   GC P++ TYNT+IN  C+ G  I   + F E A   G       PN  
Sbjct: 324 KAAETMRRMAEMGCGPDITTYNTMINFSCKGGR-IKEADEFLEKAKERGLL-----PNKF 377

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YT ++   CK+G   KA  +  ++ +    P++V+Y + IHG     + + A  +  +M
Sbjct: 378 SYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKM 437

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++GV P+   +NV+M+ LCKNG+      LL  M+   V+P+ +V+ TLMDGF   G +
Sbjct: 438 MEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGEL 497

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  +   G    +  Y+ +I G+CK  ++  ALS  ++M +    PD   Y+T+
Sbjct: 498 DEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTV 557

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + H +  A K+F +M +H    +   Y + I+G CK   ++ A ++FR ++    
Sbjct: 558 IDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDL 617

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG------- 354
             ++  Y  L+ G  K+G+ + A  +F  +       +  T++ +I+ L           
Sbjct: 618 VPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIE 677

Query: 355 ---KMDKARDLFLD 365
               M+  R L LD
Sbjct: 678 EKDSMENERSLILD 691



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 181/392 (46%), Gaps = 34/392 (8%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV----- 55
            A  LF  +R +  C P V   N+L+NGL ++G   VAL L+++M   +   G V     
Sbjct: 144 RALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYT 203

Query: 56  ----------------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
                                       C P+ V Y  IIDG CK+G +  A     ++K
Sbjct: 204 TSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELK 263

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
            + + P V TY +LI+GFC A ++     L  EM  +G+  NV  FN +++   K G + 
Sbjct: 264 MKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVT 323

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A+  +  M ++G  P+   YNT+++  C  GR+  A+E     +  G   N FSY+ L+
Sbjct: 324 KAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLM 383

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
           + YCK  +   A  +   +   G KPD+V Y     G+    +++ A  + ++M   GV 
Sbjct: 384 HAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVF 443

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   Y   + GLCKNG       L   +     + D+  +  L+DG  ++G L  A ++
Sbjct: 444 PDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKI 503

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           F+ + R  +   +V YN MI   C  GKM  A
Sbjct: 504 FKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDA 535



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 189/377 (50%), Gaps = 22/377 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++AA +  ++   G +P++ +Y   I+G+   G   VAL + E+M     E GV   P+ 
Sbjct: 393 VKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMM----EKGVF--PDA 446

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  ++ GLCK G     K L  +M D N+ P+V  + +L+ GF    + +EA  +F  
Sbjct: 447 QIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKV 506

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +GV P +V +N ++   CK GKM +A   L  M  +   P+ + Y+T++DG+     
Sbjct: 507 IIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHD 566

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A ++F  M     K NV +Y+ LING+CK  ++  A  ++  M S  + P+VV Y T
Sbjct: 567 MSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTT 626

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG---YIVEAVELFRTLR 297
           L  G F+  + E+A  +F+ M  +G   +   +   I+GL        ++E  +     R
Sbjct: 627 LVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENER 686

Query: 298 IL-----------KYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNI 345
            L            ++  I AYN +I  LCK G +  A  L  + L +G LI D V +  
Sbjct: 687 SLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLI-DSVCFTA 745

Query: 346 MIHALCADGKMDKARDL 362
           M+H LC  GK  + R++
Sbjct: 746 MLHGLCHKGKSKEWRNI 762



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 148/309 (47%), Gaps = 7/309 (2%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD-ENINPNVVTYNSLIHGFCYANDWNEAK 115
           KP    ++ +I    + G +D+A +LF  +++  N  P VV  NSL++G   +   + A 
Sbjct: 123 KPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVAL 182

Query: 116 CLFIEMM--DQGVQPNVVSF--NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            L+ +M+  D G    V ++  ++++  LC  GK++E  RL++     G  P+   YN +
Sbjct: 183 QLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMI 242

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG+C  G +  A      ++  G    V +Y  LING+CK  E E    L +EM ++G+
Sbjct: 243 IDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL 302

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             +V ++N +    F+   V +A +    M   G   D   Y T I+  CK G I EA E
Sbjct: 303 NMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADE 362

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGR-LKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
                +      +  +Y  L+   CK G  +K A  LFR    G    D+V+Y   IH +
Sbjct: 363 FLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEK-PDLVSYGAFIHGV 421

Query: 351 CADGKMDKA 359
              G++D A
Sbjct: 422 VVHGEIDVA 430



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/275 (24%), Positives = 127/275 (46%), Gaps = 6/275 (2%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           V ++SL+        + E + +   M  Q ++P   +F+ ++    ++G +D A +L   
Sbjct: 92  VAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHT 151

Query: 156 MIQI-GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM----ESMGCKHNVFSYSILINGY 210
           + ++    P     N+L++G   +G+V+ A +L+  M    +  G   + ++ SI++ G 
Sbjct: 152 VREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGL 211

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C   +IE    L  +   KG  P VV YN +  G  +   ++ A +   E++  GV    
Sbjct: 212 CNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTV 271

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I+G CK G      +L   +      ++++ +N +ID   K G +  A E  R 
Sbjct: 272 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRR 331

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           +       D+ TYN MI+  C  G++ +A D FL+
Sbjct: 332 MAEMGCGPDITTYNTMINFSCKGGRIKEA-DEFLE 365



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 8/192 (4%)

Query: 186 ELFVSMESMGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNTL 241
           E+ + +E+M  +H      ++S LI  Y ++  ++ AL L+  +       P VV  N+L
Sbjct: 109 EIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSL 168

Query: 242 FIGLFEIHQVERAFKLFDEMQRH----GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             GL +  +V+ A +L+D+M +     G   D +     + GLC  G I E   L +   
Sbjct: 169 LNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRW 228

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  +  YN +IDG CK G L+ A    + L    ++  V TY  +I+  C  G+ +
Sbjct: 229 GKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFE 288

Query: 358 KARDLFLDMEAK 369
               L  +M A+
Sbjct: 289 AVDQLLTEMAAR 300



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 89/206 (43%), Gaps = 22/206 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           + A  +F  ++ F   PNV TY TL+ G  + G    A ++FE M  NG       C PN
Sbjct: 603 IRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNG-------CPPN 655

Query: 60  TVTYTTIIDGLC-----------KEGFVDKAK---ELFLKMKDENINPNVVTYNSLIHGF 105
             T+  +I+GL            K+   ++     + F  M  E  +  +  YNS+I   
Sbjct: 656 DATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCL 715

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C     + A+ L  +M+ +G   + V F  +++ LC  GK  E   ++   +       A
Sbjct: 716 CKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKEWRNIISCDLNKIELQTA 775

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSM 191
             Y+  +D +   GR++ A  +  ++
Sbjct: 776 VKYSLTLDKYLYQGRLSEASVILQTL 801


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/296 (34%), Positives = 155/296 (52%), Gaps = 7/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           + +  F ++   G  PNV  Y   I+GLC+  +   A ++ EEM  G G      KPN  
Sbjct: 226 DVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMV-GRG-----LKPNVY 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           T+TT+IDGLCK G+ ++A  LFLK+ K  +  PNV TY  +I G+C       A+ L + 
Sbjct: 280 THTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVR 339

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M++QG++PN  ++  ++   CK G  D A  L+  M Q G  PN + YN ++DGFC  G+
Sbjct: 340 MVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGK 399

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A ++     S G K +  +Y+ILI  +CK   I  AL L+  M+  G  PD+  Y +
Sbjct: 400 IQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTS 459

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           L     +  Q+E + K FD+    G+      Y + I G CK G    A+ +F  +
Sbjct: 460 LISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERM 515



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 177/363 (48%), Gaps = 7/363 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA + +++R  G    V T N ++     TG  + A  +F+ M         VC P+  
Sbjct: 121 EAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG-----VC-PDER 174

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++  ++   C+EG V++   L   M     + +  T   ++   C    + +    F  M
Sbjct: 175 SFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSEFFRRM 234

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G  PNVV++   ++ LCK   + +A  +LE M+  G++PN + + TL+DG C  G  
Sbjct: 235 LEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWT 294

Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            RA  LF+ + +S   K NV +Y+++I GYC+  ++  A  L   M+ +G+KP+   Y T
Sbjct: 295 ERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTT 354

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +    +RAF+L ++M++ G   + + Y   IDG CK G I EA ++ R      
Sbjct: 355 LIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQG 414

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D   Y  LI   CK G +  A +LF  +       D+  Y  +I   C   +M++++
Sbjct: 415 LKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQ 474

Query: 361 DLF 363
             F
Sbjct: 475 KFF 477



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 143/257 (55%), Gaps = 5/257 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PNV+T+ TLI+GLC+ G T  A  LF ++   +       KPN  TYT +I G C+E
Sbjct: 273 GLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSY-----KPNVHTYTVMIGGYCRE 327

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A+ L ++M ++ + PN  TY +LI G C    ++ A  L  +M  +G  PN+ ++
Sbjct: 328 GKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTY 387

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  CK GK+ EA ++L +    G++ +   Y  L+   C  G +  A +LF  M  
Sbjct: 388 NAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVE 447

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  ++ +Y+ LI+ YC+ +++E +   + + L  G+ P    Y ++  G  ++ +   
Sbjct: 448 NGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTM 507

Query: 254 AFKLFDEMQRHGVAADT 270
           A ++F+ M ++G  AD+
Sbjct: 508 ALRVFERMVQNGCFADS 524



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 149/337 (44%), Gaps = 36/337 (10%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++    + G + +A ++ L+M+   +   V T N ++        +  A+ +F  M   G
Sbjct: 109 MVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTRAG 168

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V P+  SF  ++   C+ GK++E   LL  M + G   +      ++   C  GR     
Sbjct: 169 VCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVS 228

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           E F  M  MG   NV +Y+  I+G CK + ++ A  +  EM+ +G+KP+V  + TL  GL
Sbjct: 229 EFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 288

Query: 246 FEIHQVERAFKLFDE------------------------------------MQRHGVAAD 269
            +I   ERAF+LF +                                    M   G+  +
Sbjct: 289 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 348

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
           T  Y T I G CK G    A EL   ++   +  +I  YN +IDG CK G+++ A+++ R
Sbjct: 349 TNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLR 408

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
                 L  D +TY I+I   C  G +  A DLF  M
Sbjct: 409 MATSQGLKFDKITYTILITEHCKQGHITYALDLFDRM 445



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 121/237 (51%), Gaps = 7/237 (2%)

Query: 2   EAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            A  LF+KL +    +PNV TY  +I G CR G    A  L   M     E G+  KPNT
Sbjct: 296 RAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMV----EQGL--KPNT 349

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TYTT+I G CK G  D+A EL  KMK E   PN+ TYN++I GFC      EA  +   
Sbjct: 350 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 409

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
              QG++ + +++ +++ E CK G +  A  L + M++ G  P+   Y +L+  +C   +
Sbjct: 410 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 469

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           +  +++ F     +G      +Y+ +I GYCK      AL ++  M+  G   D ++
Sbjct: 470 MEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSIL 526



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 122/270 (45%), Gaps = 1/270 (0%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
             ++  F  A    EA  + +EM   G+   V + N ++    + G    A ++ + M +
Sbjct: 107 RGMVAAFGEAGRLPEAADMVLEMRSHGLPLCVETANWVLRVGLETGSFVYARKVFDGMTR 166

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            GV P+   +  L+   C  G+V   + L  +M   G   +  + ++++   C+    + 
Sbjct: 167 AGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKD 226

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
               +  ML  G  P+VV Y     GL +   V++AF + +EM   G+  + + + T ID
Sbjct: 227 VSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLID 286

Query: 279 GLCKNGYIVEAVELF-RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           GLCK G+   A  LF + ++   Y+ ++  Y  +I G C+ G+L  A  L   +    L 
Sbjct: 287 GLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLK 346

Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
            +  TY  +I   C  G  D+A +L   M+
Sbjct: 347 PNTNTYTTLIGGHCKGGSFDRAFELMNKMK 376


>gi|242049502|ref|XP_002462495.1| hypothetical protein SORBIDRAFT_02g026770 [Sorghum bicolor]
 gi|241925872|gb|EER99016.1| hypothetical protein SORBIDRAFT_02g026770 [Sorghum bicolor]
          Length = 294

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/287 (36%), Positives = 156/287 (54%), Gaps = 31/287 (10%)

Query: 50  GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
            E G VC PN V Y+T+IDG  KEG V+KA +LF +M    I+PN+VTYNS++H  C A 
Sbjct: 2   AETGAVCSPNVVAYSTVIDGFFKEGNVNKACDLFNEMVQRGISPNLVTYNSVVHALCKAR 61

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFN-------------------VIMNELCKNGKMDEAS 150
             + A+ +   M+ +GV+P+ +++N                    I+N LCK G++ EA 
Sbjct: 62  AVDRAEAILRPMVGKGVRPDRMTYNNLIYVDSSMGQWKEAVRSCSIINNLCKVGRVVEAQ 121

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            + +L + IGV PN  VYNTLMDG+CL  ++ +A ++F +M S+G + NV +YS L+NGY
Sbjct: 122 DIFDLTVSIGVHPNVMVYNTLMDGYCLVHKMKKALKVFDAMVSVGIEPNVVTYSTLVNGY 181

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   I   LSL++EML KGI+P              I +V+ A  LF  +   G+    
Sbjct: 182 CKIGRINEGLSLFTEMLHKGIEPSA------------ISRVKEAKGLFASISGSGLVPSV 229

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
             Y   +  L K G + EA  +F  +     + + R  N ++  L K
Sbjct: 230 VTYNVMMTNLIKEGLVEEADRMFSFMENSGCDPNSRLLNHVVKDLMK 276



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 28/276 (10%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +PNVV Y+++I GF    + N+A  LF EM+ +G+ PN+V++N +++ LCK   +D A  
Sbjct: 9   SPNVVAYSTVIDGFFKEGNVNKACDLFNEMVQRGISPNLVTYNSVVHALCKARAVDRAEA 68

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           +L  M+  GVRP+   YN L               ++V       K  V S SI IN  C
Sbjct: 69  ILRPMVGKGVRPDRMTYNNL---------------IYVDSSMGQWKEAVRSCSI-INNLC 112

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   +  A  ++   +S G+ P+V++YNTL  G   +H++++A K+FD M   G+  +  
Sbjct: 113 KVGRVVEAQDIFDLTVSIGVHPNVMVYNTLMDGYCLVHKMKKALKVFDAMVSVGIEPNVV 172

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y T ++G CK G I E + LF  +  L   ++  A +          R+K A  LF S+
Sbjct: 173 TYSTLVNGYCKIGRINEGLSLFTEM--LHKGIEPSAIS----------RVKEAKGLFASI 220

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
               L+  VVTYN+M+  L  +G +++A  +F  ME
Sbjct: 221 SGSGLVPSVVTYNVMMTNLIKEGLVEEADRMFSFME 256



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 130/266 (48%), Gaps = 37/266 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++   G  PN+ TYN++++ LC+      A  +   M  G G      +P+ +
Sbjct: 30  KACDLFNEMVQRGISPNLVTYNSVVHALCKARAVDRAEAILRPMV-GKG-----VRPDRM 83

Query: 62  TYT-------------------TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 102
           TY                    +II+ LCK G V +A+++F       ++PNV+ YN+L+
Sbjct: 84  TYNNLIYVDSSMGQWKEAVRSCSIINNLCKVGRVVEAQDIFDLTVSIGVHPNVMVYNTLM 143

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
            G+C  +   +A  +F  M+  G++PNVV+++ ++N  CK G+++E   L   M+  G+ 
Sbjct: 144 DGYCLVHKMKKALKVFDAMVSVGIEPNVVTYSTLVNGYCKIGRINEGLSLFTEMLHKGIE 203

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+A              RV  A+ LF S+   G   +V +Y++++    K   +E A  +
Sbjct: 204 PSAI------------SRVKEAKGLFASISGSGLVPSVVTYNVMMTNLIKEGLVEEADRM 251

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEI 248
           +S M + G  P+  + N +   L +I
Sbjct: 252 FSFMENSGCDPNSRLLNHVVKDLMKI 277



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 108/207 (52%), Gaps = 16/207 (7%)

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN   Y+T++DGF   G VN+A +LF  M   G   N+ +Y+ +++  CK + ++ A ++
Sbjct: 10  PNVVAYSTVIDGFFKEGNVNKACDLFNEMVQRGISPNLVTYNSVVHALCKARAVDRAEAI 69

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
              M+ KG++PD + YN L         V+ +   + E  R           + I+ LCK
Sbjct: 70  LRPMVGKGVRPDRMTYNNLI-------YVDSSMGQWKEAVRSC---------SIINNLCK 113

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G +VEA ++F     +    ++  YN L+DG C   ++K A ++F ++    +  +VVT
Sbjct: 114 VGRVVEAQDIFDLTVSIGVHPNVMVYNTLMDGYCLVHKMKKALKVFDAMVSVGIEPNVVT 173

Query: 343 YNIMIHALCADGKMDKARDLFLDMEAK 369
           Y+ +++  C  G++++   LF +M  K
Sbjct: 174 YSTLVNGYCKIGRINEGLSLFTEMLHK 200



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 87/169 (51%), Gaps = 18/169 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +F      G  PNV  YNTL++G C       AL +F+ M +      V  +PN 
Sbjct: 118 VEAQDIFDLTVSIGVHPNVMVYNTLMDGYCLVHKMKKALKVFDAMVS------VGIEPNV 171

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T+++G CK G +++   LF +M  + I P+ ++               EAK LF  
Sbjct: 172 VTYSTLVNGYCKIGRINEGLSLFTEMLHKGIEPSAISR------------VKEAKGLFAS 219

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
           +   G+ P+VV++NV+M  L K G ++EA R+   M   G  PN+ + N
Sbjct: 220 ISGSGLVPSVVTYNVMMTNLIKEGLVEEADRMFSFMENSGCDPNSRLLN 268


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 196/398 (49%), Gaps = 43/398 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F  +   G   NV T+N L+NG C  G    AL + E M +   EF V   P+ VT
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVS---EFKV--NPDNVT 242

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TI+  + K+G +   KEL L MK   + PN VTYN+L++G+C      EA    +E+M
Sbjct: 243 YNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA-FQIVELM 301

Query: 123 DQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            Q  V P++ ++N+++N LC  G M E   L++ M  + ++P+   YNTL+DG    G  
Sbjct: 302 KQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLS 361

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNT 240
             A +L   ME+ G K N  +++I +   CK ++ E       E++   G  PD+V Y+T
Sbjct: 362 LEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHT 421

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN----------------G 284
           L     ++  +  A ++  EM + G+  +T    T +D LCK                 G
Sbjct: 422 LIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRG 481

Query: 285 YIVE-------------------AVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +IV+                   A+E++  ++ +K    +  +N LI GLC  G+ ++A 
Sbjct: 482 FIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAM 541

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           E F  L    L+ D  T+N +I   C +G+++KA + +
Sbjct: 542 EKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFY 579



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/372 (31%), Positives = 188/372 (50%), Gaps = 14/372 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   L   ++    +P+V TYNTLI+G    G ++ A  L E+M N     GV  K N V
Sbjct: 328 EGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEND----GV--KANQV 381

Query: 62  TYTTIIDGLCKE----GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           T+   +  LCKE        K KEL   +     +P++VTY++LI  +    D + A  +
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKEL---VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEM 438

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             EM  +G++ N ++ N I++ LCK  K+DEA  LL    + G   +   Y TL+ GF  
Sbjct: 439 MREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFR 498

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             +V +A E++  M+ +     V +++ LI G C + + E A+  + E+   G+ PD   
Sbjct: 499 EEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDST 558

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           +N++ +G  +  +VE+AF+ ++E  +H    D +     ++GLCK G   +A+  F TL 
Sbjct: 559 FNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL- 617

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           I + E+D   YN +I   CK  +LK A++L   +    L  D  TYN  I  L  DGK+ 
Sbjct: 618 IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLS 677

Query: 358 KARDLFLDMEAK 369
           +  +L      K
Sbjct: 678 ETDELLKKFSGK 689



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 164/334 (49%), Gaps = 30/334 (8%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           + G  P++ TY+TLI    + G    AL +  EM    G+ G+  K NT+T  TI+D LC
Sbjct: 409 MHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREM----GQKGI--KMNTITLNTILDALC 462

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           KE  +D+A  L           + VTY +LI GF       +A  ++ EM    + P V 
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           +FN ++  LC +GK + A    + + + G+ P+   +N+++ G+C  GRV +A E +   
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNES 582

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
                K + ++ +IL+NG CK    E AL+ ++ ++ +  + D V YNT+     +  ++
Sbjct: 583 IKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKL 641

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR----ILKYELDIR- 306
           + A+ L  EM+  G+  D + Y +FI  L ++G + E  EL +        +K +L +  
Sbjct: 642 KEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRDLQVET 701

Query: 307 ------------------AYNCLIDGLCKSGRLK 322
                             AY+ +ID LC  GRLK
Sbjct: 702 EKNPATSESKEELNTEAIAYSDVIDELCSRGRLK 735



 Score =  132 bits (332), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 162/346 (46%), Gaps = 40/346 (11%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC-YANDWN--EA 114
           P+   +   +     EG    A ++F KM    + PN++T N+L+ G   Y + ++   A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI-QIGVRPNAFVYNTLMD 173
           + +F +M+  GV  NV +FNV++N  C  GK+++A  +LE M+ +  V P+   YNT++ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 174 GFCLTGRVNRAEELFVSMESMG---------------CK----------------HNVF- 201
                GR++  +EL + M+  G               CK                 NV  
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 202 ---SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
              +Y+ILING C    +   L L   M S  ++PDVV YNTL  G FE+     A KL 
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-YELDIRAYNCLIDGLCK 317
           ++M+  GV A+   +   +  LCK           + L  +  +  DI  Y+ LI    K
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            G L  A E+ R + +  +  + +T N ++ ALC + K+D+A +L 
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLL 474



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 139/274 (50%), Gaps = 6/274 (2%)

Query: 100 SLIHGFCYANDWNEAKC--LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           SL+  +   +D + + C  L    +     P+   F++ ++     GK   A ++ + MI
Sbjct: 99  SLLVSYIRTSDASLSLCNSLLHPNLHLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMI 158

Query: 158 QIGVRPNAFVYNTLMDG---FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
           ++ ++PN    NTL+ G   +  +  ++ A E+F  M  +G   NV ++++L+NGYC   
Sbjct: 159 RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEG 218

Query: 215 EIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
           ++E AL +   M+S+  + PD V YNT+   + +  ++    +L  +M+++G+  +   Y
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
              + G CK G + EA ++   ++      D+  YN LI+GLC +G ++   EL  ++  
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             L  DVVTYN +I      G   +AR L   ME
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 187/403 (46%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F K+  F   P+ FTY +LI G CR      A  +F+ M          C PN+V
Sbjct: 215 EAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDG------CNPNSV 268

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+I+GLC EG + +A ++  +M ++ I P V TY   I   C     ++A  L   M
Sbjct: 269 TYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+V ++  I++ L + GKM+ A  +   M++ G+ PN   YN L++  C  GR 
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRF 388

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++F  ME  G   N  +Y+ +I G     +IE A+ ++++ML  G  P VV YNTL
Sbjct: 389 GIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448

Query: 242 FI-----------------------------------GLFEIHQVERAFKLFDEMQRHGV 266
            +                                   G  +  +++ A   F EM + G+
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           + + W Y   IDG CK G I  A+ LF  +        I  YN +I GL K  R   A +
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK 568

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               +    L  + +TY  +I+ LC +   + A  +F +ME K
Sbjct: 569 FCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKK 611



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 181/356 (50%), Gaps = 10/356 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+V TY  +I+GL R G   +A+ ++ +M       G+V  PNTVTY  +I+ LC E
Sbjct: 332 GCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE----GLV--PNTVTYNALINELCTE 385

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G    A ++F  M+      N  TYN +I G    +D  +A  +F +M+  G  P VV++
Sbjct: 386 GRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTY 445

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++ E  K G ++ A+R L +M +    P+   Y  L+ GFC  G+++ A   F  M  
Sbjct: 446 NTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLK 505

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N ++Y+ +I+GYCK  +I+ ALSL+  M   G    +  YN +  GL + ++   
Sbjct: 506 CGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSE 565

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K   +M   G+  +T  Y + I+GLCKN     A ++F  +       +   Y  LI 
Sbjct: 566 AEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIY 625

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GLC+ G++  A      L        + TY+ ++  LC +G+ ++A  L  +M+ K
Sbjct: 626 GLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEK 677



 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 183/366 (50%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  ++ ++   G +P++ T+NT+IN LC+ G    A+ +F ++      F     P+  
Sbjct: 180 SAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI------FQFDLCPDAF 233

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I G C+   +DKA E+F +M  +  NPN VTY++LI+G C      EA  +  EM
Sbjct: 234 TYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEM 293

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++P V ++ V ++ LC  G++D+A  L+  M + G  P+   Y  ++ G    G++
Sbjct: 294 TEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKM 353

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  ++  M   G   N  +Y+ LIN  C       AL ++  M   G   +   YN +
Sbjct: 354 ELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQI 413

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF +  +E+A  +F++M + G +     Y T I    K GY+  A      ++    
Sbjct: 414 IKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNC 473

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E D R Y  LI G CK G+L  A   F  + +  +  +  TY  MI   C +GK+D A  
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALS 533

Query: 362 LFLDME 367
           LF  ME
Sbjct: 534 LFERME 539



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 106/341 (31%), Positives = 174/341 (51%), Gaps = 10/341 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           CEP+  TY  LI+G C+ G    A + F EM     + G+   PN  TYT +IDG CKEG
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEML----KCGI--SPNQWTYTAMIDGYCKEG 526

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D A  LF +M++   + ++ TYN++I G    N ++EA+    +M +QG+QPN +++ 
Sbjct: 527 KIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYT 586

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N LCKN   + A ++   M +    PNA  Y +L+ G C  G+V+ AE L       
Sbjct: 587 SLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERL----TEN 642

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC+  + +YS L++G C+      A  L   M  KG+ P + IY +L +   +  +V+ A
Sbjct: 643 GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCA 702

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            ++F+ M   G     + Y+  I  LC      EA+ +F++L   ++  D+  +  L+DG
Sbjct: 703 LEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDG 762

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           L + G   +  +    +        + TY I+   L   GK
Sbjct: 763 LLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803



 Score =  166 bits (420), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 175/368 (47%), Gaps = 10/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F K+   G  P V TYNTLI    + G+   A      M   N      C+P+  
Sbjct: 425 KAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN------CEPDER 478

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I G CK G +D A   F +M    I+PN  TY ++I G+C     + A  LF  M
Sbjct: 479 TYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERM 538

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G   ++ ++N I++ L K  +  EA +    M + G++PN   Y +L++G C     
Sbjct: 539 EENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTAT 598

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A ++F  ME   C  N  +Y+ LI G C+  +++ A      +   G +P +  Y+TL
Sbjct: 599 NLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTL 654

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    +   A +L + M+  G++     Y + +   CK+  +  A+E+F  + +  +
Sbjct: 655 VSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGF 714

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  Y  LI  LC   R + A  +F+SL +    +D++ + +++  L  +G  D    
Sbjct: 715 QPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMK 774

Query: 362 LFLDMEAK 369
               ME++
Sbjct: 775 FLYLMESR 782



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/325 (28%), Positives = 157/325 (48%), Gaps = 33/325 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM---------------- 45
            A + F ++   G  PN +TY  +I+G C+ G   VAL+LFE M                
Sbjct: 495 SATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAII 554

Query: 46  ---ANGN--GEFGVVC--------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
              + GN   E    C        +PNT+TYT++I+GLCK    + A ++F +M+ +N  
Sbjct: 555 SGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCL 614

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PN  TY SLI+G C     + A+     + + G +P + +++ +++ LC+ G+ +EAS+L
Sbjct: 615 PNAHTYTSLIYGLCQEGKVDAAE----RLTENGCEPTIDTYSTLVSGLCREGRSNEASQL 670

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           +E M + G+ P+  +Y +L+   C + +V+ A E+F  M   G + ++F Y +LI   C 
Sbjct: 671 VENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCG 730

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
               E AL+++  +L K    D++++  L  GL +    +   K    M+          
Sbjct: 731 VSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHT 790

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLR 297
           Y      L K G  +   ++   LR
Sbjct: 791 YIILARELSKVGKSIGTDQIGNRLR 815



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 156/308 (50%), Gaps = 1/308 (0%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ T++  L K   V  A+ ++ ++    + P+++T+N++I+  C      EA  +F ++
Sbjct: 164 SFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKI 223

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P+  ++  ++   C+N K+D+A  + + M++ G  PN+  Y+TL++G C  GR+
Sbjct: 224 FQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRI 283

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ++   M   G +  V++Y++ I+  C    ++ A++L   M  KG  P V  Y  +
Sbjct: 284 GEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAI 343

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF   ++E A  ++ +M + G+  +T  Y   I+ LC  G    A+++F  +     
Sbjct: 344 ISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGT 403

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA-R 360
             + + YN +I GL     ++ A  +F  + +      VVTYN +I      G ++ A R
Sbjct: 404 LANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATR 463

Query: 361 DLFLDMEA 368
            L++  E+
Sbjct: 464 FLYMMKES 471



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 90/170 (52%)

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           ++S++ L+    K   +  A ++Y+++ S G+KP ++ +NT+   L +  +V+ A  +F+
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           ++ +  +  D + Y + I G C+N  + +A E+F  +       +   Y+ LI+GLC  G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           R+  A ++   +    +   V TY + I +LC  G++D A +L   M  K
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKK 331


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 186/354 (52%), Gaps = 11/354 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P  +T+N LI+ LC +     AL LFE+M          C PN  T   ++ GLC+ G V
Sbjct: 148 PQTYTFNLLIHSLCESRAFDHALQLFEKMPQKG------CCPNEFTLGILVRGLCRAGLV 201

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A EL        I  N V YN+L+  FC     NEA+ L   M + GV P+VV+FN  
Sbjct: 202 KQALELVNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSR 260

Query: 137 MNELCKNGKMDEASRL---LELMIQIGV-RPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ LC+ GK+ EASR+   +++  ++G+ RPN   +N ++ GFC  G +  A  L  +M+
Sbjct: 261 ISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMK 320

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            +G   ++  Y+I + G  +N E+  A  +  EM++KGI+P+   YN +  GL   H + 
Sbjct: 321 KVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLS 380

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A  L D M R+GV  DT AY T + G C  G + EA  +   +     + +    N L+
Sbjct: 381 DARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLL 440

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             L K GR   A E+ + +       D VT NI+++ LC +G++DKA ++  +M
Sbjct: 441 HSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEM 494



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 197/394 (50%), Gaps = 33/394 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF K+   GC PN FT   L+ GLCR G    AL    E+ N N    +    N V
Sbjct: 168 HALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQAL----ELVNNNNSCRIA---NRV 220

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T++   C+E   ++A+ L  +M +  + P+VVT+NS I   C A    EA  +F +M
Sbjct: 221 VYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM 280

Query: 122 -MDQGV---QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            MD  +   +PNVV+FN+++   CK+G M +A  L+E M ++G   +   YN  + G   
Sbjct: 281 QMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLR 340

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G +  A  +   M + G + N ++Y+I+++G C+N  +  A  L   M+  G+ PD V 
Sbjct: 341 NGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVA 400

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+TL  G     +V  A  +  EM R+G   +T+   T +  L K G  +EA E+ + + 
Sbjct: 401 YSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMN 460

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFR--------SLPRGVLIA----------- 338
              Y+ D    N +++GLC++G L  A E+          SL +G   A           
Sbjct: 461 EKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSN 520

Query: 339 ---DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              D +TY  +I+ LC  G++++A+  F++M AK
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAK 554



 Score =  175 bits (444), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 195/422 (46%), Gaps = 59/422 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G  P+V T+N+ I+ LCR G  + A  +F +M   + E G+  +PN V
Sbjct: 237 EAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDM-QMDAELGLP-RPNVV 294

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ G CK G +  A+ L   MK      ++  YN  + G     +  EA+ +  EM
Sbjct: 295 TFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEM 354

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G++PN  ++N++M+ LC+N  + +A  L++LM++ GV P+   Y+TL+ G+C  G+V
Sbjct: 355 VAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKV 414

Query: 182 NRAEELFVSMESMGCKHNVF-----------------------------------SYSIL 206
             A+ +   M   GC+ N +                                   + +I+
Sbjct: 415 FEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIV 474

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIK----------------------PDVVIYNTLFIG 244
           +NG C+N E++ A  + SEM + G                        PD + Y TL  G
Sbjct: 475 VNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLING 534

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++ ++E A K F EM    +  D+  Y TFI   CK G I  A  + + +        
Sbjct: 535 LCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKT 594

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           ++ YN LI GL  + ++   + L   +    +  D+ TYN +I  LC  GK   A  L  
Sbjct: 595 LQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLH 654

Query: 365 DM 366
           +M
Sbjct: 655 EM 656



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 117/418 (27%), Positives = 187/418 (44%), Gaps = 55/418 (13%)

Query: 1   MEAAALFMKLRVFG----CEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN--------- 47
           MEA+ +F  +++        PNV T+N ++ G C+ G    A  L E M           
Sbjct: 271 MEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLEC 330

Query: 48  ---------GNGEF--------GVVCK---PNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
                     NGE          +V K   PN  TY  ++DGLC+   +  A+ L   M 
Sbjct: 331 YNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMM 390

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD 147
              + P+ V Y++L+HG+C      EAK +  EM+  G QPN  + N +++ L K G+  
Sbjct: 391 RNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTL 450

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK---------- 197
           EA  +L+ M +   +P+    N +++G C  G +++A E+   M + G            
Sbjct: 451 EAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFAS 510

Query: 198 -----HNV-------FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
                HNV        +Y+ LING CK   +E A   + EML+K ++PD V Y+T     
Sbjct: 511 LINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSF 570

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +  ++  AF++  +M+R+G +     Y   I GL  N  I E   L   ++      DI
Sbjct: 571 CKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDI 630

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             YN +I  LC+ G+ K A  L   +    +  +V ++ I+I A         A +LF
Sbjct: 631 CTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELF 688



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 165/347 (47%), Gaps = 17/347 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM--------ANGNGEF 52
           +EA  +  K+     +P+  T N ++NGLCR G    A  +  EM          GN   
Sbjct: 450 LEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNGPTSLDKGNSFA 509

Query: 53  GVV--------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
            ++        C P+ +TYTT+I+GLCK G +++AK+ F++M  +N+ P+ VTY++ I  
Sbjct: 510 SLINSIHNVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWS 569

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           FC     + A  +  +M   G    + ++N ++  L  N ++ E   L + M + G+ P+
Sbjct: 570 FCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPD 629

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN ++   C  G+   A  L   M   G   NV S+ ILI  + K+ + + A  L+ 
Sbjct: 630 ICTYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFE 689

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             L+   + +  +Y+ +F  L    Q+  A +LF+      +    + Y+  I  LC++ 
Sbjct: 690 VALNICGRKE-ALYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDE 748

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            + +A  L   L    Y  D  ++  +IDGL K G  + A EL + +
Sbjct: 749 RLADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRM 795



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/299 (30%), Positives = 142/299 (47%), Gaps = 11/299 (3%)

Query: 12  VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           V  C P+  TY TLINGLC+ G    A   F EM   N       +P++VTY T I   C
Sbjct: 518 VSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKN------LRPDSVTYDTFIWSFC 571

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           K+G +  A  +   M+    +  + TYN+LI G    N   E   L  EM ++G+ P++ 
Sbjct: 572 KQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDIC 631

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF-VS 190
           ++N I+  LC+ GK  +A  LL  M+  G+ PN   +  L+  F  +     A ELF V+
Sbjct: 632 TYNNIITCLCEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVA 691

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           +   G K  +  YS++ N      ++  A  L+   L + +     +Y  L   L +  +
Sbjct: 692 LNICGRKEAL--YSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDER 749

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           +  A  L  ++   G   D  ++   IDGL K G   +A EL +  R+++ EL+ R  +
Sbjct: 750 LADANSLLYKLIDKGYGFDHASFMPVIDGLSKRGNKRQADELAK--RMMELELEDRPVD 806



 Score =  114 bits (284), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 157/354 (44%), Gaps = 47/354 (13%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELF--LKMKDENINPNVVTYNSLIHGFCYANDWN 112
           +  P+ ++   ++  L   G VD A   F  L+ +  +++P++  YN L+      +   
Sbjct: 76  IAHPSLISMVRVLAQL---GHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPG 132

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
               L+ +M+   V P   +FN++++ LC++   D A +L E M Q G  PN F    L+
Sbjct: 133 FVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILV 192

Query: 173 DGFCLTGRVNRAEELFVSMESMGCK-HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
            G C  G V +A EL  +  S  C+  N   Y+ L++ +C+ +    A  L   M   G+
Sbjct: 193 RGLCRAGLVKQALELVNNNNS--CRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGV 250

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ-----------------------RHGVAA 268
            PDVV +N+    L    +V  A ++F +MQ                       +HG+  
Sbjct: 251 LPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMG 310

Query: 269 DTWA----------------YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           D                   Y  ++ GL +NG ++EA  +   +     E +   YN ++
Sbjct: 311 DARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMM 370

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           DGLC++  L  A  L   + R  +  D V Y+ ++H  C+ GK+ +A+ +  +M
Sbjct: 371 DGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEM 424



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 78/165 (47%), Gaps = 1/165 (0%)

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y++L+    ++        LYS+ML+  + P    +N L   L E    + A +LF++M 
Sbjct: 118 YNLLLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMP 177

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           + G   + +     + GLC+ G + +A+EL       +    +  YN L+   C+     
Sbjct: 178 QKGCCPNEFTLGILVRGLCRAGLVKQALELVNNNNSCRIANRV-VYNTLVSRFCREEMNN 236

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A  L   +    ++ DVVT+N  I ALC  GK+ +A  +F DM+
Sbjct: 237 EAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQ 281



 Score = 54.3 bits (129), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  ++   G  PNV ++  LI    ++    VA  LFE   N       +C     
Sbjct: 648 DAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALN-------ICGRKEA 700

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+ + + L   G + +AKELF    D  +      Y  LI   C      +A  L  ++
Sbjct: 701 LYSLMFNELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKL 760

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV--RPNAFVYN 169
           +D+G   +  SF  +++ L K G   +A  L + M+++ +  RP    Y+
Sbjct: 761 IDKGYGFDHASFMPVIDGLSKRGNKRQADELAKRMMELELEDRPVDRTYS 810


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 183/356 (51%), Gaps = 6/356 (1%)

Query: 4    AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
             +LF+++R  G  PNV  YN++I+ LC+      A+ + ++M      F   C P+ +T+
Sbjct: 1237 GSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQM------FASGCDPDIITF 1290

Query: 64   TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
             T+I GLC EG V KA+    +     +NPN ++Y  LIHGFC   +   A  L +EMM 
Sbjct: 1291 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMG 1350

Query: 124  QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            +G  P+VV+F  +++ L   GK+ EA  + E M +  V P+  +YN L+ G C    +  
Sbjct: 1351 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPA 1410

Query: 184  AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
            A+ +   M     + + F Y+ LI+G+ +++ +  A  ++  M  KGI PD+V  N +  
Sbjct: 1411 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIK 1470

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
            G  +   +  A      M++ G   D + Y T I G  K G +  A+     +   K + 
Sbjct: 1471 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 1530

Query: 304  DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++  Y+ LI+G CK+G    A  LF ++    L  +VVTY I+I +L    K+ +A
Sbjct: 1531 NVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 1586



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 178/391 (45%), Gaps = 41/391 (10%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            GC P+V  YN LI+G CR G     L L  EM       G +  P  VTY ++I+ L K+
Sbjct: 1177 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETK----GFL--PTLVTYGSLINWLGKK 1230

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            G ++K   LFL+M+    +PNV  YNS+I   C      +A  +  +M   G  P++++F
Sbjct: 1231 GDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITF 1290

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            N ++  LC  G + +A   L   I+  + PN   Y  L+ GFC+ G +  A +L V M  
Sbjct: 1291 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMG 1350

Query: 194  MGCKHNVFS-----------------------------------YSILINGYCKNKEIEG 218
             G   +V +                                   Y++LI+G CK + +  
Sbjct: 1351 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPA 1410

Query: 219  ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
            A ++  EML K ++PD  +Y TL  G      +  A K+F+ M+  G+  D  +    I 
Sbjct: 1411 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIK 1470

Query: 279  GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            G C+ G + EA+     +R +    D   Y  +I G  K G L  A      + +     
Sbjct: 1471 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 1530

Query: 339  DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +VVTY+ +I+  C  G  D A  LF +M+A+
Sbjct: 1531 NVVTYSSLINGYCKTGDTDFAEGLFANMQAE 1561



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 159/350 (45%), Gaps = 8/350 (2%)

Query: 12   VFGCEPNVFTYNT--LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
            + G +     Y+T  L+ GLC        L L E        +G  C P+ V Y  +IDG
Sbjct: 1138 MLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIE------ARWGAGCIPHVVFYNVLIDG 1191

Query: 70   LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
             C+ G + +   L  +M+ +   P +VTY SLI+      D  +   LF+EM  +G  PN
Sbjct: 1192 YCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPN 1251

Query: 130  VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            V  +N +++ LCK     +A  +L+ M   G  P+   +NTL+ G C  G V +AE    
Sbjct: 1252 VQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR 1311

Query: 190  SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
                     N  SY+ LI+G+C   E+  A  L  EM+ +G  PDVV +  L  GL    
Sbjct: 1312 EAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAG 1371

Query: 250  QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            +V  A  + ++M    V  D   Y   I GLCK   +  A  +   +     + D   Y 
Sbjct: 1372 KVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYA 1431

Query: 310  CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             LIDG  +S  L  A ++F  +    +  D+V+ N MI   C  G M +A
Sbjct: 1432 TLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEA 1481



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 180/370 (48%), Gaps = 21/370 (5%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            M A+ L +++   G  P+V T+  LI+GL   G    AL + E+M            P+ 
Sbjct: 1339 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ------VFPDV 1392

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
              Y  +I GLCK+  +  AK +  +M ++N+ P+   Y +LI GF  + +  +A+ +F  
Sbjct: 1393 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 1452

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M  +G+ P++VS N ++   C+ G M EA   +  M ++G  P+ F Y T++ G+   G 
Sbjct: 1453 MEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1512

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +N A      M    CK NV +YS LINGYCK  + + A  L++ M ++ + P+VV Y  
Sbjct: 1513 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTI 1572

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL------------CKNGYIVE 288
            L   LF+  +V RA   F+ M  +  + +       ++GL            C    +  
Sbjct: 1573 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1632

Query: 289  AVELFRTLRILKYEL-DIR--AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
               L    + L +++ D R  AYN +I  LC+   L+ A +    + +   + + +T+  
Sbjct: 1633 KDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLS 1692

Query: 346  MIHALCADGK 355
            +++  C+ GK
Sbjct: 1693 LLYGFCSVGK 1702



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 143/305 (46%), Gaps = 5/305 (1%)

Query: 58   PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN-PNVVTYNSLIHGFCYANDWNEAKC 116
            P       ++      G + KA ++  +++++  + P V   N L+        W++A+ 
Sbjct: 1074 PTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 1133

Query: 117  LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            L+ EM+ +    +  S  V++  LC   +++E  +L+E     G  P+   YN L+DG+C
Sbjct: 1134 LYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 1193

Query: 177  LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              G + R   L   ME+ G    + +Y  LIN   K  ++E   SL+ EM  +G  P+V 
Sbjct: 1194 RRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1253

Query: 237  IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            IYN++   L +     +A  +  +M   G   D   + T I GLC  G++ +A    R  
Sbjct: 1254 IYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR-- 1311

Query: 297  RILKYELDIR--AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
              ++ EL+    +Y  LI G C  G L +A +L   +       DVVT+  +IH L   G
Sbjct: 1312 EAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAG 1371

Query: 355  KMDKA 359
            K+ +A
Sbjct: 1372 KVSEA 1376



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 130/293 (44%)

Query: 77   DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            D A++L+ +M  ++   +  +   L+ G C      E   L       G  P+VV +NV+
Sbjct: 1129 DDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVL 1188

Query: 137  MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
            ++  C+ G M     LL  M   G  P    Y +L++     G + +   LF+ M   G 
Sbjct: 1189 IDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1248

Query: 197  KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              NV  Y+ +I+  CK +    A+ +  +M + G  PD++ +NTL  GL     V +A  
Sbjct: 1249 SPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEH 1308

Query: 257  LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
               E  R  +  +  +Y   I G C  G ++ A +L   +    +  D+  +  LI GL 
Sbjct: 1309 FLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLV 1368

Query: 317  KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +G++  A  +   +    +  DV  YN++I  LC    +  A+++  +M  K
Sbjct: 1369 VAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1421


>gi|225437600|ref|XP_002271180.1| PREDICTED: pentatricopeptide repeat-containing protein At2g31400,
           chloroplastic [Vitis vinifera]
          Length = 867

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 184/341 (53%), Gaps = 9/341 (2%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD- 77
           V+ ++ LI+   R+G+   A+ +FE M +         KPN VTY  +ID  C +G VD 
Sbjct: 220 VYAFSALISAYGRSGYCDEAIKVFETMKSSG------LKPNLVTYNAVIDA-CGKGGVDF 272

Query: 78  -KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A E+F +M    + P+ +T+NSL+        W  A+ LF EM+ +G++ ++ ++N +
Sbjct: 273 NRAAEIFDEMLRNGVQPDRITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTL 332

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ +CK G+MD A +++  M +  + PN   Y+T++DG+   GR++ A  LF  M+    
Sbjct: 333 LDAVCKGGQMDLAFQIMSEMPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASI 392

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +  SY+ L++ Y K    E AL++  EM S GIK D V YN L  G  +  + E   +
Sbjct: 393 GLDRVSYNTLLSIYAKLGRFEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKR 452

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +F+EM+   +  +   Y T ID   K G   EA+E+FR  +    + D+  Y+ LID LC
Sbjct: 453 VFEEMKAERIFPNLLTYSTLIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALC 512

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           K+G ++ A      + +  +  +VVTYN +I A    G  +
Sbjct: 513 KNGLVESAVSFLDEMTKEGIRPNVVTYNSIIDAFGRSGSAE 553



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/347 (33%), Positives = 182/347 (52%), Gaps = 14/347 (4%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTV-TYTTIIDGLCKEGFVDKAK 80
           + +I+ L R G   +A N+FE   N G G        NTV  ++ +I    + G+ D+A 
Sbjct: 189 SAMISILGRLGQVELAKNVFETALNEGYG--------NTVYAFSALISAYGRSGYCDEAI 240

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
           ++F  MK   + PN+VTYN++I        D+N A  +F EM+  GVQP+ ++FN ++  
Sbjct: 241 KVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLRNGVQPDRITFNSLL-A 299

Query: 140 LCKNGKMDEASR-LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
           +C  G + EA+R L   M+  G+  + F YNTL+D  C  G+++ A ++   M       
Sbjct: 300 VCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKHIMP 359

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           NV +YS +I+GY K   ++ AL+L++EM    I  D V YNTL     ++ + E A  + 
Sbjct: 360 NVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVC 419

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            EM+  G+  D   Y   + G  K G   E   +F  ++  +   ++  Y+ LID   K 
Sbjct: 420 KEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKG 479

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
           G  + A E+FR   +  L ADVV Y+ +I ALC +G ++ A   FLD
Sbjct: 480 GLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVS-FLD 525



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 132/239 (55%), Gaps = 6/239 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF ++   G E ++FTYNTL++ +C+ G   +A  +  EM   +        PN VT
Sbjct: 310 ARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSEMPRKH------IMPNVVT 363

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+T+IDG  K G +D+A  LF +MK  +I  + V+YN+L+  +     + EA  +  EM 
Sbjct: 364 YSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGRFEEALNVCKEME 423

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G++ + V++N ++    K GK +E  R+ E M    + PN   Y+TL+D +   G   
Sbjct: 424 SSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYSTLIDVYSKGGLYQ 483

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A E+F   +  G K +V  YS LI+  CKN  +E A+S   EM  +GI+P+VV YN++
Sbjct: 484 EAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEGIRPNVVTYNSI 542



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 159/319 (49%), Gaps = 7/319 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNT 60
           EA  +F  ++  G +PN+ TYN +I+   + G     A  +F+EM   NG      +P+ 
Sbjct: 238 EAIKVFETMKSSGLKPNLVTYNAVIDACGKGGVDFNRAAEIFDEMLR-NG-----VQPDR 291

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +T+ +++    + G  + A+ LF +M    I  ++ TYN+L+   C     + A  +  E
Sbjct: 292 ITFNSLLAVCGRGGLWEAARNLFSEMLYRGIEQDIFTYNTLLDAVCKGGQMDLAFQIMSE 351

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  + + PNVV+++ +++   K G++DEA  L   M    +  +   YNTL+  +   GR
Sbjct: 352 MPRKHIMPNVVTYSTVIDGYAKAGRLDEALNLFNEMKFASIGLDRVSYNTLLSIYAKLGR 411

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A  +   MES G K +  +Y+ L+ GY K  + E    ++ EM ++ I P+++ Y+T
Sbjct: 412 FEEALNVCKEMESSGIKKDAVTYNALLGGYGKQGKYEEVKRVFEEMKAERIFPNLLTYST 471

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +    + A ++F E ++ G+ AD   Y   ID LCKNG +  AV     +    
Sbjct: 472 LIDVYSKGGLYQEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG 531

Query: 301 YELDIRAYNCLIDGLCKSG 319
              ++  YN +ID   +SG
Sbjct: 532 IRPNVVTYNSIIDAFGRSG 550



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/183 (26%), Positives = 79/183 (43%), Gaps = 35/183 (19%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            EA  +F + +  G + +V  Y+ LI+ LC+ G    A++  +EM           +PN 
Sbjct: 483 QEAMEVFREFKKAGLKADVVLYSALIDALCKNGLVESAVSFLDEMTKEG------IRPNV 536

Query: 61  VTYTTIIDGLCKEGF------------VDKAKELFLKMKDENINPNVVTY--NSLIHGF- 105
           VTY +IID   + G             V K     LK+ ++     V     N +I  F 
Sbjct: 537 VTYNSIIDAFGRSGSAECVIDPPYETNVSKMSSSSLKVVEDATESEVGDKEDNQIIKIFG 596

Query: 106 -------CYANDWNEAK-------CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
                  C+A   N  +        +F +M +  ++PNVV+F+ I+N   +    ++AS 
Sbjct: 597 QLAAEKTCHAKKENRGRQEILCILAVFHKMHELDIKPNVVTFSAILNACSRCNSFEDASM 656

Query: 152 LLE 154
           LLE
Sbjct: 657 LLE 659


>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Brachypodium distachyon]
          Length = 554

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 178/361 (49%), Gaps = 7/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   +++L   G  P    +N L+    R G  + A  +F+EM           +P  V
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRS-------VQPTVV 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ T+I G+C+   +D    L+ +M D  + P+V TY +LI GFC       A  +F EM
Sbjct: 222 TFNTLISGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEM 281

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV PN V F  +++  CK G ++    L + M   GV P+   YN L++G C    +
Sbjct: 282 RDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNL 341

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE +   M++ G K +  +Y+ LI+G CK+ +++ A+ +  +M  K +  D V Y  L
Sbjct: 342 KAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTAL 401

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +   A ++  EM    +  D   Y   ID  C+ G +    +L + ++    
Sbjct: 402 ISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK 461

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  YN +++GLCK G++K A  L  ++    +  D +TYNI++   C  GK+  + +
Sbjct: 462 KPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEE 521

Query: 362 L 362
           L
Sbjct: 522 L 522



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 91/292 (31%), Positives = 150/292 (51%), Gaps = 1/292 (0%)

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A   +L++ D  + P    +N L+  F    +   A+ +F EM  + VQP VV+FN ++
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMR-RSVQPTVVTFNTLI 227

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + +C+   +D    L + M  +GV+P+ + Y  L+ GFC TGR+  A ++F  M   G  
Sbjct: 228 SGMCRARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVN 287

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N   ++ LI+ +CK   +   + LY +M  +G+ PD+V YN L  GL     ++ A  +
Sbjct: 288 PNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESI 347

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            +EM+  G+  D   Y T IDG CK+G +  A+++ + +   +  LD   Y  LI GL K
Sbjct: 348 VEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSK 407

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +GR   A  + R +    L  D  TY ++I A C  G +     L  +M+ K
Sbjct: 408 AGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNK 459



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 137/237 (57%), Gaps = 9/237 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+  +RV G  P++  YN L+NGLCR  +   A ++ EEM N         KP+ VTYTT
Sbjct: 312 LYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAG------LKPDKVTYTT 365

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +IDG CK+G +D A ++  KM ++ ++ + VTY +LI G   A    +A+ +  EMM+  
Sbjct: 366 LIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAA 425

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++P+  ++ ++++  C+ G +    +LL+ M   G +P    YN +M+G C  G++  A+
Sbjct: 426 LEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNAD 485

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            L  +M ++G   +  +Y+IL++G CK+ ++  +  L S   SKG+ PD  +Y +L 
Sbjct: 486 MLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEELES---SKGMVPDFAVYTSLI 539



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 9/127 (7%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EP+  TY  +I+  CR G       L +EM N         KP  VTY  I++GLCK G 
Sbjct: 427 EPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGK------KPGVVTYNVIMNGLCKLGQ 480

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +  A  L   M +  ++P+ +TYN L+ G C       ++ L      +G+ P+   +  
Sbjct: 481 MKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKVANSEEL---ESSKGMVPDFAVYTS 537

Query: 136 IMNELCK 142
           +++EL K
Sbjct: 538 LISELAK 544


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  189 bits (479), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/328 (34%), Positives = 174/328 (53%), Gaps = 6/328 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++  +  FG +P + TYNTL++  C+ G     L+L  EM          C PN V
Sbjct: 523 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRG------CAPNDV 576

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GL K+G  ++AK L  +M    +  +  TYN LI+G+       EA  L  EM
Sbjct: 577 TYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEM 636

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P V ++N  +  LCK G+M +A + L  M+   + P+   YNTL+ G+C  G +
Sbjct: 637 VLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNL 696

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  LF  + S+     + +Y+ L++G C+  E+E A  L  EM+++GI PD+V Y  L
Sbjct: 697 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTIL 756

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  +  A + FDEM   G+  D++AY T I G  K G    A  L   +    +
Sbjct: 757 VNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGF 816

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFR 329
             D+  YN ++DGLCK G L+ A EL +
Sbjct: 817 PPDLIIYNVVVDGLCKLGNLEEASELLQ 844



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 158/314 (50%), Gaps = 2/314 (0%)

Query: 50  GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN 109
           GEFG+  KP  VTY T++D  CK G V +  +L  +M+     PN VTYN LI+G     
Sbjct: 532 GEFGI--KPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKG 589

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
           ++ +AK L  EM+  G++ +  ++N ++      G + EA  L E M+  G  P    YN
Sbjct: 590 EFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYN 649

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           + + G C  GR++ A +    M +     +V SY+ LI GYC+   +  A  L+ E+ S 
Sbjct: 650 SFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSI 709

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
            + P +V YNTL  GL    ++E A +L  EM   G+A D   Y   ++G CK G +  A
Sbjct: 710 YLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMA 769

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
            E F  +     ELD  AY   I G  K G    A+ L   +       D++ YN+++  
Sbjct: 770 QEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDG 829

Query: 350 LCADGKMDKARDLF 363
           LC  G +++A +L 
Sbjct: 830 LCKLGNLEEASELL 843



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           K+  V++   +F KM    ++P+V   N ++      +  ++A  ++  M + G++P +V
Sbjct: 482 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 541

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           ++N +++  CK GK+ +   LL  M + G  PN   YN L++G    G   +A+ L   M
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
              G K + ++Y+ LI GY     +  ALSL  EM+ KG  P V  YN+   GL ++ ++
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 661

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
             A +   +M  + +  D  +Y T I G C+ G +++A  LF  LR +     I  YN L
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 721

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +DGLC+ G L++A +L   +    +  D+VTY I+++  C  G +  A++ F +M
Sbjct: 722 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 776



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 152/313 (48%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            P+      I+  L  +  + KA E++  M +  I P +VTYN+L+  +C      +   
Sbjct: 502 SPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLD 561

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM  +G  PN V++NV++N L K G+ ++A  L+  M++ G++ +A+ YN L+ G+ 
Sbjct: 562 LLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYF 621

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G +  A  L   M   G    V +Y+  I G CK   +  A+   S+ML+  + PDVV
Sbjct: 622 NKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVV 681

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YNTL  G   +  + +AF LFDE++   +      Y T +DGLC+ G +  A +L   +
Sbjct: 682 SYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEM 741

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  DI  Y  L++G CK G L +A E F  +    L  D   Y   I      G  
Sbjct: 742 INEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDT 801

Query: 357 DKARDLFLDMEAK 369
            +A  L  +M AK
Sbjct: 802 SRAFSLQEEMLAK 814



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 141/264 (53%), Gaps = 9/264 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G + + +TYN LI G    G    AL+L EEM            P   
Sbjct: 593 QAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGA------SPTVA 646

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY + I GLCK G +  A +    M   N+ P+VV+YN+LI+G+C   +  +A  LF E+
Sbjct: 647 TYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDEL 706

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + P +V++N +++ LC+ G+++ A +L   MI  G+ P+   Y  L++G C  G +
Sbjct: 707 RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSL 766

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A+E F  M   G + + ++Y+  I G  K  +   A SL  EML+KG  PD++IYN +
Sbjct: 767 SMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVV 826

Query: 242 FIGLFEIHQVERAFKLFDEMQRHG 265
             GL ++  +E A +L   +Q+ G
Sbjct: 827 VDGLCKLGNLEEASEL---LQKDG 847



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 112/227 (49%)

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K   +++   + + MI+  + P+    N ++        +++A E++ +M   G K  + 
Sbjct: 482 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 541

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ L++ YCK  +++  L L SEM  +G  P+ V YN L  GL +  + E+A  L  EM
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            + G+    + Y   I G    G + EA+ L   + +      +  YN  I GLCK GR+
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 661

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             A +    +    L+ DVV+YN +I+  C  G + KA  LF ++ +
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRS 708



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 6/154 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M+A  LF +LR     P + TYNTL++GLCR G   VA  L  EM N     G+   P+ 
Sbjct: 697 MKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINE----GIA--PDI 750

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTYT +++G CK G +  A+E F +M  E +  +   Y + I G     D + A  L  E
Sbjct: 751 VTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEE 810

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
           M+ +G  P+++ +NV+++ LCK G ++EAS LL+
Sbjct: 811 MLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQ 844



 Score = 61.6 bits (148), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 79/178 (44%), Gaps = 3/178 (1%)

Query: 195 GCKHNVFSYSIL---INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
           GC  +  S  IL   I  Y K   +E  LS++ +M+   + PDV   N +   L +   +
Sbjct: 462 GCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLM 521

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            +A +++  M   G+      Y T +D  CK G + + ++L   ++      +   YN L
Sbjct: 522 SKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVL 581

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           I+GL K G  + A  L   + +  L     TYN +I+     G + +A  L  +M  K
Sbjct: 582 INGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLK 639


>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
 gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 882

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 98/313 (31%), Positives = 172/313 (54%), Gaps = 6/313 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F  +R +G  P+V +Y+ LI+GL + G      N+F  M      F +    +   Y  
Sbjct: 550 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNA 603

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++DG CK G V KA E+  +MK++ + P V TY +++ G    +  +EA  LF E   +G
Sbjct: 604 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 663

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ NVV ++ +++   K G++DEA  +LE M++ G+ PN + +N+L+D       +N A 
Sbjct: 664 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 723

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F SM+ M C  N ++YSILING C+ ++   A   + +M  +G+ P+VV Y T+  GL
Sbjct: 724 VCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 783

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            ++  +  A+ LF+  + +G   D  ++   I+G+      +EA ++F   R+    ++I
Sbjct: 784 AKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQVFEETRLRGCRINI 843

Query: 306 RAYNCLIDGLCKS 318
           ++   L+D L KS
Sbjct: 844 KSCISLLDALNKS 856



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 187/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++      P  + YNT+I G    G    A  L E +     E G  C P+ V
Sbjct: 302 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLR----ERG--CIPSVV 355

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +I+  L K+  VD+A  LF  MK ++  PN  TYN +I   C      EA  +  EM
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 414

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN+++ N++++ LCK  K++EA ++ E   Q G  P+   Y +L+DG    G+V
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 474

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M   G   N   Y+ LI  +  +   E    ++ E++ +G KPD+ + NT 
Sbjct: 475 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTY 534

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              +F+  +VE+   +F++++ +G   D  +Y   I GL K G   E   +F  ++   +
Sbjct: 535 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 594

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD RAYN ++DG CKSG++  A+E+   +    +   V TY  ++  L    ++D+A  
Sbjct: 595 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYM 654

Query: 362 LFLDMEAK 369
           LF + ++K
Sbjct: 655 LFEEAKSK 662



 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 201/398 (50%), Gaps = 50/398 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A+LF         PN+ T N +++ LC+      A  +FE  A+  G     C P+ 
Sbjct: 414 MEHASLF---------PNLLTVNIMVDRLCKARKLEEAYKIFES-ASQRG-----CNPDC 458

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF--------------- 105
           VTY ++IDGL K+G VD+A  LF KM D   N N V Y SLI  F               
Sbjct: 459 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 518

Query: 106 ------------------CY--ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                             C   A +  + + +F ++   G  P+V S++++++ L K G+
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             E S +   M Q G   +A  YN ++DGFC +G+V++A E+   M+    +  V +Y  
Sbjct: 579 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 638

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++G  K   ++ A  L+ E  SKGI+ +VV+Y++L  G  ++ +++ A+ + +EM + G
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 698

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  + + + + +D L K   I EA+  F++++ +K   +   Y+ LI+GLC+  +   A+
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             ++ + +  L+ +VVTY  MI  L   G +  A  LF
Sbjct: 759 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 796



 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 198/404 (49%), Gaps = 44/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A AL  +++    EP++  YN  I+   + G+  +A   F E+ A G        KP+ 
Sbjct: 232 DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQG-------LKPDD 284

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+YT++I  LCK G + +A+ELF +M+ E   P    YN++I G+  A  + +A  L   
Sbjct: 285 VSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLER 344

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + ++G  P+VVSFN I+  L K  K+DEA  L E+M +    PN+  YN ++D  CL GR
Sbjct: 345 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGR 403

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  +   ME      N+ + +I+++  CK +++E A  ++     +G  PD V Y +
Sbjct: 404 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 463

Query: 241 LFIGLFEIHQVERAFKLFD-----------------------------------EMQRHG 265
           L  GL +  QV+ A++LF+                                   E+ R G
Sbjct: 464 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRG 523

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D     T++D + K G + +   +F  +R   +  D+R+Y+ LI GL K+G+ +   
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 583

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +F ++ +     D   YN ++   C  GK+ KA ++  +M+ K
Sbjct: 584 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 627



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 185/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +LR  GC P+V ++N+++  L +      AL+LFE M           +PN+ 
Sbjct: 337 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSS 389

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  IID LC  G V++A  +  +M+  ++ PN++T N ++   C A    EA  +F   
Sbjct: 390 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 449

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ V++  +++ L K G++DEA RL E M+  G   N  VY +L+  F + GR 
Sbjct: 450 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 509

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               ++F  +   GCK ++   +  ++   K  E+E    ++ ++ S G  PDV  Y+ L
Sbjct: 510 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 569

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E+   ++    
Sbjct: 570 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 629

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  Y  ++DGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A  
Sbjct: 630 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 689

Query: 362 LFLDMEAK 369
           +  +M  K
Sbjct: 690 ILEEMMKK 697



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 150/296 (50%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E + +F  ++  G   +   YN +++G C++G    A  + EEM           +P   
Sbjct: 581 ETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK------CVQPTVA 634

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  I+DGL K   +D+A  LF + K + I  NVV Y+SLI GF      +EA  +  EM
Sbjct: 635 TYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEM 694

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV ++N +++ L K  +++EA    + M ++   PN + Y+ L++G C   + 
Sbjct: 695 MKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKY 754

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A   +  M+  G   NV +Y+ +I+G  K   I  A SL+    + G  PD   +N L
Sbjct: 755 NKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNAL 814

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             G+   ++   A+++F+E +  G   +  +  + +D L K+  + +A  +   LR
Sbjct: 815 IEGMSNANRAMEAYQVFEETRLRGCRINIKSCISLLDALNKSECLEQAAIVGAVLR 870



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 1/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P    YT +I  L +    ++A EL  +M++      V  + +L+          +A  
Sbjct: 176 RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 235

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  E+    ++P++V +NV ++   K G +D A +    +   G++P+   Y +++   C
Sbjct: 236 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  AEELF  ME+       ++Y+ +I GY      E A  L   +  +G  P VV
Sbjct: 296 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 355

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N++   L +  +V+ A  LF+ M++     ++  Y   ID LC  G + EA  +   +
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEM 414

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++   N ++D LCK+ +L+ A+++F S  +     D VTY  +I  L   G++
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 474

Query: 357 DKARDLFLDM 366
           D+A  LF  M
Sbjct: 475 DEAYRLFEKM 484



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/332 (25%), Positives = 150/332 (45%), Gaps = 10/332 (3%)

Query: 34  HTIVAL-NLFEEMAN-GNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
           H + AL  + EEMA  G G     C         +   L +   +D A      M+    
Sbjct: 123 HDLAALEKVLEEMAVLGYGLPNQAC-------AHLAAALVRARRLDDAVLAVAVMRRLKF 175

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P    Y  LI     A     A  L  +M + G +  V  F  ++  L + G++ +A  
Sbjct: 176 RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 235

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L++ +    + P+  +YN  +D F   G V+ A + F  +++ G K +  SY+ +I   C
Sbjct: 236 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLC 295

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K   +  A  L+++M ++   P    YNT+ +G     + E A+KL + ++  G      
Sbjct: 296 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 355

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           ++ + +  L K   + EA+ LF  ++    E +   YN +ID LC  GR++ A+ +   +
Sbjct: 356 SFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 414

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
               L  +++T NIM+  LC   K+++A  +F
Sbjct: 415 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 446



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 7/179 (3%)

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           + +  C H       L     + + ++ A+   + M     +P    Y  L   L E  +
Sbjct: 142 LPNQACAH-------LAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARR 194

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
            ERA +L  +MQ  G       + T +  L + G + +A+ L   ++    E DI  YN 
Sbjct: 195 PERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNV 254

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ID   K+G + +AW+ F  L    L  D V+Y  MI  LC  G++ +A +LF  MEA+
Sbjct: 255 CIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 313


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ K++  G +P++ TY++L+ G C  G    AL L+ EM +          PN V
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG------FPPNEV 466

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ G  K+   D A  L  +M+   ++    TYN LI+G    N   E   +    
Sbjct: 467 TYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRF 526

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P  +++N I+N   K G M  A  +   M + G+ PN   Y + +DG+C T   
Sbjct: 527 LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L + +   G + ++ +Y+  I+ +CK   +  AL     +L  G+ PDV +YN+ 
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   +  +  A K +  M +  V ADT  Y T IDG  K G +  A+EL+  +     
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D + +  L  GLC+SG +  A  L   + R  +  ++VTYN++I+A   DGK+ +A  
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766

Query: 362 LFLDM 366
           L  +M
Sbjct: 767 LHDEM 771



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 178/389 (45%), Gaps = 42/389 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ + +N +I GL R      A+ L + +     + GV   P+  TY  +I  LCK 
Sbjct: 356 GLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVV----DTGV---PDVFTYGCLIHWLCKH 408

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             + +A  L+ KMK+  + P++VTY+SL+ G+C     +EA  L+ EM D+G  PN V++
Sbjct: 409 QKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTY 468

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             +M    K    D A  LL  M Q GV    + YN L++G  +  RV   +E+     S
Sbjct: 469 TTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLS 528

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G      +Y+ +ING+ K   +  A  +Y +M  KGI P++V Y +   G    +  + 
Sbjct: 529 EGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDL 588

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL--------------------- 292
           A KL   ++R G+  D  AY  FID  CK G +  A+                       
Sbjct: 589 AVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVT 648

Query: 293 -FRTLRILK------YEL-------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            ++ L+++       Y +       D   Y  LIDG  K G +  A EL+  +    +I 
Sbjct: 649 GYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIP 708

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDME 367
           D  T+  + H LC  G +D A+ L  DM 
Sbjct: 709 DDKTFTALTHGLCRSGDIDGAKRLLDDMR 737



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +  K+R  G EP   TY+++++ L +      AL L ++M    G+     K + V
Sbjct: 238 RALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQMLLATGK-----KMDVV 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T ++ G C  G V KA +LF ++  + + P  VTY  LI G       +E   L  +M
Sbjct: 293 LATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQM 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG+ P+   FN+++  L ++ +  +A  LL+L++  GV P+ F Y  L+   C   ++
Sbjct: 353 IEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKL 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L+  M+  G K ++ +Y  L+ GYC+   ++ AL LYSEM  KG  P+ V Y TL
Sbjct: 412 HEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    + A+ L +EM+++GV+   + Y   I+GL     + E  E+ +      +
Sbjct: 472 MKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGF 531

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
                 YN +I+G  K+G +  A+ ++R + +  +  ++VTY   I   C
Sbjct: 532 VPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYC 581



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 176/404 (43%), Gaps = 43/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++R  GC  +   Y+ +I    R G    A+ LF+EMA      G   KP+  
Sbjct: 168 DALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMA------GAGVKPDER 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS--------------------- 100
            Y   I GLCK    D+A ++  KM++    P  +TY+S                     
Sbjct: 222 VYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVRRMDEALRLKDQM 281

Query: 101 ---------------LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                          L+HG+C   +  +A  LF E++  GV P  V++ V++      G 
Sbjct: 282 LLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGM 341

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            DE  +L   MI+ G+ P+ + +N ++ G     R   A  L   +   G   +VF+Y  
Sbjct: 342 TDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVDTGVP-DVFTYGC 400

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+  CK++++  A++L+ +M   G+KP +V Y++L +G  E  +++ A KL+ EM   G
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +   Y T + G  K      A  L   +R          YN LI+GL    R+    
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           E+ +       +   +TYN +I+     G M  A  ++  M  K
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK 564



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 37/286 (12%)

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +  M+ +GV P+  S   ++          +A  L + M   G   +A +Y+ ++     
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A  LF  M   G K +   Y+I I+G CK ++ + AL +  +M   G +P  + 
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 238 YNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR-- 294
           Y+++   L ++ +++ A +L D+M    G   D       + G C NG + +A++LF   
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 295 -----TLRILKYELDIRA----------------------------YNCLIDGLCKSGRL 321
                T   + Y + I+                             +N +I GL +  R 
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           K A  L + L     + DV TY  +IH LC   K+ +A +L+  M+
Sbjct: 378 KDAIGLLK-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMK 422


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 192/369 (52%), Gaps = 8/369 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E A L +   V     +V TYN ++  LC  G    A NL+++M       G    P+ 
Sbjct: 413 LENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKM------IGKGITPSL 466

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+Y  +I G CK+G +D A E+   + +  + PN +TY  L+ G     D   A  +F +
Sbjct: 467 VSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQ 526

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G+ P   +FN I+N LCK G++ EA   L   I+    P +  YN ++DG+   G 
Sbjct: 527 MVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGA 586

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ AE ++  M       NV +Y+ LING+CK+ +++ AL ++ +M  KG++ D+ +Y T
Sbjct: 587 IDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYAT 646

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++  +E A K F ++   G+  +T  Y   I        +  A+ L + +   K
Sbjct: 647 LIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNK 706

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKA 359
              D++ Y  LIDGL K G+L  A +L+   L RG+ + D+  YN++I+ LC  G+++ A
Sbjct: 707 IPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGI-VPDIFMYNVLINGLCNHGQLENA 765

Query: 360 RDLFLDMEA 368
             +  +M+ 
Sbjct: 766 GKILKEMDG 774



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ K+   G  P++ +YN +I G C+ G     ++   E+ NG  E G+  KPN +
Sbjct: 449 EACNLWDKMIGKGITPSLVSYNHMILGHCKKG----CMDDAHEVMNGIIESGL--KPNAI 502

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +++G  K+G  + A  +F +M    I P   T+NS+I+G C     +EA+      
Sbjct: 503 TYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTF 562

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + Q   P  +++N I++   K G +D A  +   M +  + PN   Y +L++GFC + ++
Sbjct: 563 IKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKM 622

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++   M+  G + ++  Y+ LI G+CK +++E A   +S++L  G+ P+ ++YN +
Sbjct: 623 DLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTPNTIVYNIM 682

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                 ++ +E A  L  EM  + +  D   Y + IDGL K G +  A++L+  +     
Sbjct: 683 ISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGI 742

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  YN LI+GLC  G+L+ A ++ + +    +   V+ YN +I     +G + +A  
Sbjct: 743 VPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFR 802

Query: 362 LFLDM 366
           L  +M
Sbjct: 803 LHDEM 807



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 116/403 (28%), Positives = 189/403 (46%), Gaps = 40/403 (9%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA   F +    G + +  +Y+ +I  +CR       L+L  ++  G+ E G V  P+ 
Sbjct: 239 VEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSD----LDLASKLVEGDEELGWV--PSE 292

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I    + G   +A  L  +M D  +  NV    SLI G+C   D N A  LF E
Sbjct: 293 GTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDE 352

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF----- 175
           +++ GV PNV  F+V++    K G +++A+ L   M  +G++P  F+ N L+ GF     
Sbjct: 353 VVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNL 412

Query: 176 -----------------------------CLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                        C  G+VN A  L+  M   G   ++ SY+ +
Sbjct: 413 LENAYLLLDGAVENGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHM 472

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I G+CK   ++ A  + + ++  G+KP+ + Y  L  G F+    E AF +FD+M   G+
Sbjct: 473 ILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGI 532

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
               + + + I+GLCK G + EA +   T     +      YNC+IDG  K G +  A  
Sbjct: 533 VPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAES 592

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           ++R + R  +  +V+TY  +I+  C   KMD A  +  DM+ K
Sbjct: 593 VYREMCRSEISPNVITYTSLINGFCKSNKMDLALKMHDDMKRK 635



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 174/336 (51%), Gaps = 6/336 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +PN  TY  L+ G  + G    A N+F++M       G+V  P   T+ +II+GLCK 
Sbjct: 496 GLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAA----GIV--PTDYTFNSIINGLCKV 549

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A++       ++  P  +TYN +I G+      + A+ ++ EM    + PNV+++
Sbjct: 550 GRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITY 609

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++N  CK+ KMD A ++ + M + G+  +  VY TL+ GFC    +  A + F  +  
Sbjct: 610 TSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLE 669

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   N   Y+I+I+ Y     +E AL+L+ EM++  I  D+ IY +L  GL +  ++  
Sbjct: 670 VGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSF 729

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L+ EM   G+  D + Y   I+GLC +G +  A ++ + +        +  YN LI 
Sbjct: 730 ALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIA 789

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           G  K G L+ A+ L   +    L+ D  TY+I+++ 
Sbjct: 790 GHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 161/367 (43%), Gaps = 7/367 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  +   G  P V   N L+  + R      A  LF+EMA     +G     +  
Sbjct: 170 EAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERR-IYG-----DCY 223

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   ++    K G   +A+  F +     +  +  +Y+ +I   C  +D + A  L    
Sbjct: 224 TLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGD 283

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G  P+  ++  ++    + G   EA RL + M+   V  N  V  +L+ G+C+ G V
Sbjct: 284 EELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDV 343

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  LF  +  +G   NV  +S+LI    K   +E A  LY+ M   G++P V I N L
Sbjct: 344 NSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFL 403

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + + +E A+ L D    +G+A+    Y   +  LC+ G + EA  L+  +     
Sbjct: 404 LKGFRKQNLLENAYLLLDGAVENGIAS-VVTYNIVLLWLCELGKVNEACNLWDKMIGKGI 462

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              + +YN +I G CK G +  A E+   +    L  + +TY I++      G  + A +
Sbjct: 463 TPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFN 522

Query: 362 LFLDMEA 368
           +F  M A
Sbjct: 523 MFDQMVA 529



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 136/295 (46%), Gaps = 3/295 (1%)

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +A E F  M ++ + P V   N L+      N   +A  LF EM ++ +  +  +  V
Sbjct: 168 ITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERRIYGDCYTLQV 227

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +M    K GK  EA R        G++ +A  Y+ ++   C    ++ A +L    E +G
Sbjct: 228 LMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLASKLVEGDEELG 287

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              +  +Y+ +I    +      AL L  EM+   +  +V +  +L  G      V  A 
Sbjct: 288 WVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSAL 347

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +LFDE+   GV  +   +   I+   K G + +A EL+  ++ +  +  +   N L+ G 
Sbjct: 348 RLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGF 407

Query: 316 CKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K   L+ A+ L   ++  G  IA VVTYNI++  LC  GK+++A +L+  M  K
Sbjct: 408 RKQNLLENAYLLLDGAVENG--IASVVTYNIVLLWLCELGKVNEACNLWDKMIGK 460


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 181/354 (51%), Gaps = 8/354 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A+ L  ++  FG  PN  T+N LI+G    G+   AL +F  M A G         P+ V
Sbjct: 357 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-------LTPSEV 409

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++DGLCK    D A+  +++MK   +    +TY  +I G C     +EA  L  EM
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P++V+++ ++N  CK G+   A  ++  + ++G+ PN  +Y+TL+   C  G +
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  ++ +M   G   + F++++L+   CK  ++  A      M S GI P+ V ++ L
Sbjct: 530 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 589

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +  +AF +FDEM + G     + Y + + GLCK G++ EA +  ++L  +  
Sbjct: 590 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 649

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
            +D   YN L+  +CKSG L  A  LF  + +  ++ D  TY  +I  LC  GK
Sbjct: 650 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  +F  + ++G  P+V+T N ++  + ++G  +   +  +EM         +C P+  
Sbjct: 181 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVA 234

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+ LC EG  +K+  L  KM+     P +VTYN+++H +C    +  A  L   M
Sbjct: 235 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  +V ++N+++++LC++ ++ +   LL  M +  + PN   YNTL++GF   G+V
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M S G   N  +++ LI+G+      + AL ++  M +KG+ P  V Y  L
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  + + A   +  M+R+GV      Y   IDGLCKNG++ EAV L   +     
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 474

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  Y+ LI+G CK GR K A E+   + R  L  + + Y+ +I+  C  G + +A  
Sbjct: 475 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 534

Query: 362 LFLDM 366
           ++  M
Sbjct: 535 IYEAM 539



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +++ L  K+   G  P + TYNT+++  C+ G    A+ L + M +  G    VC     
Sbjct: 251 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVC----- 304

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  LC+   + K   L   M+   I+PN VTYN+LI+GF        A  L  EM
Sbjct: 305 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 364

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN V+FN +++     G   EA ++  +M   G+ P+   Y  L+DG C     
Sbjct: 365 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 424

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   ++ M+  G      +Y+ +I+G CKN  ++ A+ L +EM   GI PD+V Y+ L
Sbjct: 425 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 484

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ + + A ++   + R G++ +   Y T I   C+ G + EA+ ++  + +  +
Sbjct: 485 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 544

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +N L+  LCK+G++  A E  R +    ++ + V+++ +I+     G+  KA  
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 604

Query: 362 LFLDM 366
           +F +M
Sbjct: 605 VFDEM 609



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   +M+++  G      TY  +I+GLC+ G    A+ L  EM+    +      P+ VT
Sbjct: 427 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID------PDIVT 480

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +I+G CK G    AKE+  ++    ++PN + Y++LI+  C      EA  ++  M+
Sbjct: 481 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 540

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   +  +FNV++  LCK GK+ EA   +  M   G+ PN   ++ L++G+  +G   
Sbjct: 541 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 600

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  +F  M  +G     F+Y  L+ G CK   +  A      + +     D V+YNTL 
Sbjct: 601 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 660

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             + +   + +A  LF EM +  +  D++ Y + I GLC+ G  V A+   +        
Sbjct: 661 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 720

Query: 303 LDIRA-YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           L  +  Y C +DG+ K+G+ K        +       D+VT N MI      GK++K  D
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780

Query: 362 LFLDM 366
           L  +M
Sbjct: 781 LLPEM 785



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 18/369 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIV-------ALNLFEEMANGNGE----FGVV------CKP 58
           +P + T + ++  +C T H +V       A ++ +E++  +G+    FG +      C  
Sbjct: 103 QPGLET-DHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNS 161

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y  +I    +EG +  + E+F  M     NP+V T N+++     + +        
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ + + P+V +FN+++N LC  G  +++S L++ M + G  P    YNT++  +C  
Sbjct: 222 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 281

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GR   A EL   M+S G   +V +Y++LI+  C++  I     L  +M  + I P+ V Y
Sbjct: 282 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 341

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  G     +V  A +L +EM   G++ +   +   IDG    G   EA+++F  +  
Sbjct: 342 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y  L+DGLCK+    +A   +  + R  +    +TY  MI  LC +G +D+
Sbjct: 402 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 461

Query: 359 ARDLFLDME 367
           A  L  +M 
Sbjct: 462 AVVLLNEMS 470



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 32/398 (8%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----------- 50
            +A +LF ++      P+ +TY +LI+GLCR G T++A+ LF + A   G           
Sbjct: 671  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTC 729

Query: 51   -----------EFGVVCK---------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                       + G+  +         P+ VT   +IDG  + G ++K  +L  +M ++N
Sbjct: 730  FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 789

Query: 91   INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
              PN+ TYN L+HG+    D + +  L+  ++  G+ P+ ++ + ++  +C++  ++   
Sbjct: 790  GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 849

Query: 151  RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            ++L+  I  GV  + + +N L+   C  G +N A +L   M S+G   +  +   +++  
Sbjct: 850  KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 909

Query: 211  CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             +N   + +  +  EM  +GI P+   Y  L  GL  +  ++ AF + +EM  H +    
Sbjct: 910  NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 969

Query: 271  WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             A    +  L K G   EA  L R +  +K    I ++  L+   CK+G +  A EL   
Sbjct: 970  VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 1029

Query: 331  LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +    L  D+V+YN++I  LCA G M  A +L+ +M+ 
Sbjct: 1030 MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1067



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 173/395 (43%), Gaps = 42/395 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A ++F ++   G  P  FTY +L+ GLC+ GH   A    + +        V    +T
Sbjct: 600 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDT 653

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T++  +CK G + KA  LF +M   +I P+  TY SLI G C       A     E
Sbjct: 654 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 713

Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              +G V PN V +   ++ + K G+        E M  +G  P+    N ++DG+   G
Sbjct: 714 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 773

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ +  +L   M +     N+ +Y+IL++GY K K++  +  LY  ++  GI PD +  +
Sbjct: 774 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 833

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L +G+ E + +E   K+       GV  D + +   I   C NG I  A +L + +  L
Sbjct: 834 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 893

Query: 300 KYELD-----------------------------------IRAYNCLIDGLCKSGRLKIA 324
              LD                                    R Y  LI+GLC+ G +K A
Sbjct: 894 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 953

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + +   +    +    V  + M+ AL   GK D+A
Sbjct: 954 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 6/233 (2%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G E + +T+N LI+  C  G    A +L + M +     G+    +T     ++  L + 
Sbjct: 859  GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKDTCD--AMVSVLNRN 912

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                +++ +  +M  + I+P    Y  LI+G C   D   A  +  EM+   + P  V+ 
Sbjct: 913  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 972

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            + ++  L K GK DEA+ LL  M+++ + P    + TLM   C  G V  A EL V M +
Sbjct: 973  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 1032

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
             G K ++ SY++LI G C   ++  A  LY EM   G   +   Y  L  GL 
Sbjct: 1033 CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 2/242 (0%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+V  +++++    + G + ++  +  LM   G  P+ +  N ++     +G        
Sbjct: 163 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 220

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M       +V +++ILIN  C     E +  L  +M   G  P +V YNT+     +
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             + + A +L D M+  GV AD   Y   I  LC++  I +   L R +R      +   
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN LI+G    G++ IA +L   +    L  + VT+N +I    ++G   +A  +F  ME
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 400

Query: 368 AK 369
           AK
Sbjct: 401 AK 402



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 12/278 (4%)

Query: 6    LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV---T 62
            L+  + + G  P+  T ++L+ G+C +    + L + +           +C+   V   T
Sbjct: 816  LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK---------AFICRGVEVDRYT 866

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +  +I   C  G ++ A +L   M    I+ +  T ++++      + + E++ +  EM 
Sbjct: 867  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 926

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             QG+ P    +  ++N LC+ G +  A  + E MI   + P     + ++      G+ +
Sbjct: 927  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A  L   M  M     + S++ L++  CKN  +  AL L   M + G+K D+V YN L 
Sbjct: 987  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             GL     +  AF+L++EM+  G  A+   Y+  I GL
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1084



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 22/243 (9%)

Query: 129 NVVSFNVIMNELCKNGKMDEASR--LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           ++V    I   +    +M + +R  L EL +  G   ++FV+  LM  + L         
Sbjct: 110 HIVQLVCITTHILVRARMYDPARHILKELSLMSG--KSSFVFGALMTTYRL--------- 158

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
                    C  N   Y ILI  Y +   I+ +L ++  M   G  P V   N +   + 
Sbjct: 159 ---------CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 209

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  +    +    EM +  +  D   +   I+ LC  G   ++  L + +    Y   I 
Sbjct: 210 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 269

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            YN ++   CK GR K A EL   +    + ADV TYN++IH LC   ++ K   L  DM
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329

Query: 367 EAK 369
             +
Sbjct: 330 RKR 332



 Score = 38.9 bits (89), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  L + +   G + ++ +YN LI GLC  G   +A  L+EEM  G+G        N 
Sbjct: 1021 IEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM-KGDGFLA-----NA 1074

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLK 85
             TY  +I GL          ++ LK
Sbjct: 1075 TTYKALIRGLLARETAFSGADIILK 1099


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/365 (30%), Positives = 182/365 (49%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ K++  G +P++ TY++L+ G C  G    AL L+ EM +          PN V
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG------FPPNEV 466

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ G  K+   D A  L  +M+   ++    TYN LI+G    N   E   +    
Sbjct: 467 TYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRF 526

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P  +++N I+N   K G M  A  +   M + G+ PN   Y + +DG+C T   
Sbjct: 527 LSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCC 586

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L + +   G + ++ +Y+  I+ +CK   +  AL     +L  G+ PDV +YN+ 
Sbjct: 587 DLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSF 646

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   +  +  A K +  M +  V ADT  Y T IDG  K G +  A+EL+  +     
Sbjct: 647 VTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHV 706

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D + +  L  GLC+SG +  A  L   + R  +  ++VTYN++I+A   DGK+ +A  
Sbjct: 707 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQ 766

Query: 362 LFLDM 366
           L  +M
Sbjct: 767 LHDEM 771



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 176/385 (45%), Gaps = 42/385 (10%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           + + +N +I GL R      A+ L E +     + GV   P+  TY  +I  LCK   + 
Sbjct: 360 STYEFNLVIKGLLRDKRWKDAIGLLELVV----DTGV---PDVFTYGCLIHWLCKHQKLH 412

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A  L+ KMK+  + P++VTY+SL+ G+C     +EA  L+ EM D+G  PN V++  +M
Sbjct: 413 EAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLM 472

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
               K    D A  LL  M Q GV    + YN L++G  +  RV   +E+     S G  
Sbjct: 473 KGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFV 532

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
               +Y+ +ING+ K   +  A  +Y +M  KGI P++V Y +   G    +  + A KL
Sbjct: 533 PTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKL 592

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL----------------------FRT 295
              ++R G+  D  AY  FID  CK G +  A+                        ++ 
Sbjct: 593 LIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKN 652

Query: 296 LRILK------YEL-------DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
           L+++       Y +       D   Y  LIDG  K G +  A EL+  +    +I D  T
Sbjct: 653 LKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKT 712

Query: 343 YNIMIHALCADGKMDKARDLFLDME 367
           +  + H LC  G +D A+ L  DM 
Sbjct: 713 FTALTHGLCRSGDIDGAKRLLDDMR 737



 Score =  167 bits (422), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 178/350 (50%), Gaps = 6/350 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +  K+R  G EP   TY+++++ L + G    AL L ++M    G+     K + V
Sbjct: 238 RALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGK-----KMDVV 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             T ++ G C  G V KA +LF ++  + + P  VTY  LI G       +E   L  +M
Sbjct: 293 LATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQM 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG+  +   FN+++  L ++ +  +A  LLEL++  GV P+ F Y  L+   C   ++
Sbjct: 353 IEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKL 411

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L+  M+  G K ++ +Y  L+ GYC+   ++ AL LYSEM  KG  P+ V Y TL
Sbjct: 412 HEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTL 471

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    + A+ L +EM+++GV+   + Y   I+GL     + E  E+ +      +
Sbjct: 472 MKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGF 531

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
                 YN +I+G  K+G +  A+ ++R + +  +  ++VTY   I   C
Sbjct: 532 VPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYC 581



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 175/404 (43%), Gaps = 43/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF ++R  GC  +   Y+ +I    R G    A+ LF+EMA      G   KP+  
Sbjct: 168 DALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAVRLFDEMA------GAGVKPDER 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNS--------------------- 100
            Y   I GLCK    D+A ++  KM++    P  +TY+S                     
Sbjct: 222 VYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVGRMDEALRLKDQM 281

Query: 101 ---------------LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                          L+HG+C   +  +A  LF E++  GV P  V++ V++      G 
Sbjct: 282 LLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTYGVLIKGCDAEGM 341

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
            DE  +L   MI+ G+  + + +N ++ G     R   A  L   +   G   +VF+Y  
Sbjct: 342 SDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVDTGVP-DVFTYGC 400

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+  CK++++  A++L+ +M   G+KP +V Y++L +G  E  +++ A KL+ EM   G
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              +   Y T + G  K      A  L   +R          YN LI+GL    R+    
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           E+ +       +   +TYN +I+     G M  A  ++  M  K
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKK 564



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 161/362 (44%), Gaps = 8/362 (2%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           + ++   G  P+  +   L+    R      AL LF+EM  G G     C  +   Y  +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEM-RGKG-----CYADAKMYDVV 191

Query: 67  IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           I    + G    A  LF +M    + P+   Y   I G C   D + A  +  +M + G 
Sbjct: 192 IRACVRGGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGF 251

Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +P  ++++ +++ L K G+MDEA RL  ++++  G + +  +   LM G+CL G V +A 
Sbjct: 252 EPWELTYSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKAL 311

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +LF  + S G      +Y +LI G       +    L  +M+ +G+      +N +  GL
Sbjct: 312 DLFDEVVSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGL 371

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               + + A  L + +   GV  D + Y   I  LCK+  + EAV L+  ++    +  I
Sbjct: 372 LRDKRWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSI 430

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y+ L+ G C+ GR+  A +L+  +P      + VTY  ++         D A  L  +
Sbjct: 431 VTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNE 490

Query: 366 ME 367
           M 
Sbjct: 491 MR 492



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 150/318 (47%), Gaps = 4/318 (1%)

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           GVV  P+  + T ++    +      A  LF +M+ +    +   Y+ +I          
Sbjct: 145 GVV--PDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHC 202

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A  LF EM   GV+P+   + + ++ LCK    D A ++L  M + G  P    Y++++
Sbjct: 203 DAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVV 262

Query: 173 DGFCLTGRVNRAEELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           D     GR++ A  L   M  + G K +V   ++L++GYC + E+  AL L+ E++S G+
Sbjct: 263 DVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGV 322

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P  V Y  L  G       +  +KL  +M   G+   T+ +   I GL ++    +A+ 
Sbjct: 323 TPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIG 382

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L   L +     D+  Y CLI  LCK  +L  A  L+  +    +   +VTY+ ++   C
Sbjct: 383 LLE-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYC 441

Query: 352 ADGKMDKARDLFLDMEAK 369
             G+MD+A  L+ +M  K
Sbjct: 442 EKGRMDEALKLYSEMPDK 459


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 181/354 (51%), Gaps = 8/354 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A+ L  ++  FG  PN  T+N LI+G    G+   AL +F  M A G         P+ V
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-------LTPSEV 369

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++DGLCK    D A+  +++MK   +    +TY  +I G C     +EA  L  EM
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P++V+++ ++N  CK G+   A  ++  + ++G+ PN  +Y+TL+   C  G +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  ++ +M   G   + F++++L+   CK  ++  A      M S GI P+ V ++ L
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +  +AF +FDEM + G     + Y + + GLCK G++ EA +  ++L  +  
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
            +D   YN L+  +CKSG L  A  LF  + +  ++ D  TY  +I  LC  GK
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663



 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  +F  + ++G  P+V+T N ++  + ++G  +   +  +EM         +C P+  
Sbjct: 141 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVA 194

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+ LC EG  +K+  L  KM+     P +VTYN+++H +C    +  A  L   M
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  +V ++N+++++LC++ ++ +   LL  M +  + PN   YNTL++GF   G+V
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M S G   N  +++ LI+G+      + AL ++  M +KG+ P  V Y  L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  + + A   +  M+R+GV      Y   IDGLCKNG++ EAV L   +     
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  Y+ LI+G CK GR K A E+   + R  L  + + Y+ +I+  C  G + +A  
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 494

Query: 362 LFLDM 366
           ++  M
Sbjct: 495 IYEAM 499



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +++ L  K+   G  P + TYNT+++  C+ G    A+ L + M +  G    VC     
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVC----- 264

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  LC+   + K   L   M+   I+PN VTYN+LI+GF        A  L  EM
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 324

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN V+FN +++     G   EA ++  +M   G+ P+   Y  L+DG C     
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   ++ M+  G      +Y+ +I+G CKN  ++ A+ L +EM   GI PD+V Y+ L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ + + A ++   + R G++ +   Y T I   C+ G + EA+ ++  + +  +
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +N L+  LCK+G++  A E  R +    ++ + V+++ +I+     G+  KA  
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564

Query: 362 LFLDM 366
           +F +M
Sbjct: 565 VFDEM 569



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   +M+++  G      TY  +I+GLC+ G    A+ L  EM+    +      P+ VT
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID------PDIVT 440

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +I+G CK G    AKE+  ++    ++PN + Y++LI+  C      EA  ++  M+
Sbjct: 441 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 500

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   +  +FNV++  LCK GK+ EA   +  M   G+ PN   ++ L++G+  +G   
Sbjct: 501 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  +F  M  +G     F+Y  L+ G CK   +  A      + +     D V+YNTL 
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             + +   + +A  LF EM +  +  D++ Y + I GLC+ G  V A+   +        
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680

Query: 303 LDIRA-YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           L  +  Y C +DG+ K+G+ K        +       D+VT N MI      GK++K  D
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 740

Query: 362 LFLDM 366
           L  +M
Sbjct: 741 LLPEM 745



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 18/369 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIV-------ALNLFEEMANGNGE----FGVV------CKP 58
           +P + T + ++  +C T H +V       A ++ +E++  +G+    FG +      C  
Sbjct: 63  QPGLET-DHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNS 121

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y  +I    +EG +  + E+F  M     NP+V T N+++     + +        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ + + P+V +FN+++N LC  G  +++S L++ M + G  P    YNT++  +C  
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GR   A EL   M+S G   +V +Y++LI+  C++  I     L  +M  + I P+ V Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  G     +V  A +L +EM   G++ +   +   IDG    G   EA+++F  +  
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y  L+DGLCK+    +A   +  + R  +    +TY  MI  LC +G +D+
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 359 ARDLFLDME 367
           A  L  +M 
Sbjct: 422 AVVLLNEMS 430



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 32/398 (8%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----------- 50
            +A +LF ++      P+ +TY +LI+GLCR G T++A+ LF + A   G           
Sbjct: 631  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTC 689

Query: 51   -----------EFGVVCK---------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                       + G+  +         P+ VT   +IDG  + G ++K  +L  +M ++N
Sbjct: 690  FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 91   INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
              PN+ TYN L+HG+    D + +  L+  ++  G+ P+ ++ + ++  +C++  ++   
Sbjct: 750  GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 151  RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            ++L+  I  GV  + + +N L+   C  G +N A +L   M S+G   +  +   +++  
Sbjct: 810  KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 211  CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             +N   + +  +  EM  +GI P+   Y  L  GL  +  ++ AF + +EM  H +    
Sbjct: 870  NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 271  WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             A    +  L K G   EA  L R +  +K    I ++  L+   CK+G +  A EL   
Sbjct: 930  VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989

Query: 331  LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +    L  D+V+YN++I  LCA G M  A +L+ +M+ 
Sbjct: 990  MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 173/395 (43%), Gaps = 42/395 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A ++F ++   G  P  FTY +L+ GLC+ GH   A    + +        V    +T
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDT 613

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T++  +CK G + KA  LF +M   +I P+  TY SLI G C       A     E
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673

Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              +G V PN V +   ++ + K G+        E M  +G  P+    N ++DG+   G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ +  +L   M +     N+ +Y+IL++GY K K++  +  LY  ++  GI PD +  +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L +G+ E + +E   K+       GV  D + +   I   C NG I  A +L + +  L
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853

Query: 300 KYELD-----------------------------------IRAYNCLIDGLCKSGRLKIA 324
              LD                                    R Y  LI+GLC+ G +K A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + +   +    +    V  + M+ AL   GK D+A
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 6/233 (2%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G E + +T+N LI+  C  G    A +L + M +     G+    +T     ++  L + 
Sbjct: 819  GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKDTCD--AMVSVLNRN 872

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                +++ +  +M  + I+P    Y  LI+G C   D   A  +  EM+   + P  V+ 
Sbjct: 873  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            + ++  L K GK DEA+ LL  M+++ + P    + TLM   C  G V  A EL V M +
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
             G K ++ SY++LI G C   ++  A  LY EM   G   +   Y  L  GL 
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 2/242 (0%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+V  +++++    + G + ++  +  LM   G  P+ +  N ++     +G        
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M       +V +++ILIN  C     E +  L  +M   G  P +V YNT+     +
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             + + A +L D M+  GV AD   Y   I  LC++  I +   L R +R      +   
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN LI+G    G++ IA +L   +    L  + VT+N +I    ++G   +A  +F  ME
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 368 AK 369
           AK
Sbjct: 361 AK 362



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 12/278 (4%)

Query: 6    LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV---T 62
            L+  + + G  P+  T ++L+ G+C +    + L + +           +C+   V   T
Sbjct: 776  LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK---------AFICRGVEVDRYT 826

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +  +I   C  G ++ A +L   M    I+ +  T ++++      + + E++ +  EM 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             QG+ P    +  ++N LC+ G +  A  + E MI   + P     + ++      G+ +
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A  L   M  M     + S++ L++  CKN  +  AL L   M + G+K D+V YN L 
Sbjct: 947  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             GL     +  AF+L++EM+  G  A+   Y+  I GL
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 22/243 (9%)

Query: 129 NVVSFNVIMNELCKNGKMDEASR--LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           ++V    I   +    +M + +R  L EL +  G   ++FV+  LM  + L         
Sbjct: 70  HIVQLVCITTHILVRARMYDPARHILKELSLMSG--KSSFVFGALMTTYRL--------- 118

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
                    C  N   Y ILI  Y +   I+ +L ++  M   G  P V   N +   + 
Sbjct: 119 ---------CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  +    +    EM +  +  D   +   I+ LC  G   ++  L + +    Y   I 
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            YN ++   CK GR K A EL   +    + ADV TYN++IH LC   ++ K   L  DM
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 367 EAK 369
             +
Sbjct: 290 RKR 292



 Score = 38.9 bits (89), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  L + +   G + ++ +YN LI GLC  G   +A  L+EEM  G+G        N 
Sbjct: 981  IEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM-KGDGFLA-----NA 1034

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLK 85
             TY  +I GL          ++ LK
Sbjct: 1035 TTYKALIRGLLARETAFSGADIILK 1059


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 177/354 (50%), Gaps = 6/354 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EPNV ++N L+ G        V   L  EM +     G+    N  T+  I+  LC    
Sbjct: 125 EPNVSSFNILLRGFAARDDFEVVNALLREMKSR----GITS--NGATHGVILSALCARRD 178

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +DKA   F  +      P + TY  L+ G C A+    A  +F EM+ +G +P++++++ 
Sbjct: 179 LDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSS 238

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L K G++DEA +L++LM+  G  P A  Y +++ G C  GR+  A +    M    
Sbjct: 239 LIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRR 298

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
            +  V +YS ++ GY    ++E A ++  EM  +   PD + Y      L+ I + E A 
Sbjct: 299 LRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAE 358

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           K+F+ M   G   D   Y   ID  CK G +  A  + R +     + +   Y  ++DG 
Sbjct: 359 KVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGF 418

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            KS RL+ A EL++ + +  ++   VTYN +I+ALC   KMD+A +L  +M+ +
Sbjct: 419 VKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 472



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/367 (30%), Positives = 185/367 (50%), Gaps = 8/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F  +    CEP +FTY  L++GLC+      A ++FEEM           KP+ +
Sbjct: 181 KAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKG------YKPDII 234

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+++IDGL K G VD+A++L   M      P  V Y S++ G C      EA     EM
Sbjct: 235 AYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 294

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + ++P V +++ I+      GK+++A  ++E M      P+   Y   ++     GR 
Sbjct: 295 RRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 354

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE++F +M   GCK ++ +Y I+I+ +CK   +  A  +   M    +KP+  IY  +
Sbjct: 355 EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMI 414

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +  ++E A +L+  + + G+   T  Y T I+ LCK   + EA+EL R ++  K 
Sbjct: 415 MDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKE 474

Query: 302 ELD--IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           EL+  I  Y+ +I GL K G  + A++L   +    +I D  TY  +I  L   GK+ +A
Sbjct: 475 ELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRA 534

Query: 360 RDLFLDM 366
            +L  +M
Sbjct: 535 MELLEEM 541



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 135/273 (49%), Gaps = 3/273 (1%)

Query: 97  TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
           T NSL+         ++A   F   + +   PNV SFN+++         +  + LL  M
Sbjct: 98  TRNSLLLALVRGGHLSDALGFFQSSISE---PNVSSFNILLRGFAARDDFEVVNALLREM 154

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
              G+  N   +  ++   C    +++A   F S+    C+  +F+Y++L++G CK  ++
Sbjct: 155 KSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKV 214

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E A  ++ EM+ KG KPD++ Y++L  GL +  +V+ A KL D M   G      AY + 
Sbjct: 215 ERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSI 274

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           + GLCK G I EAV+  + +R  +    +  Y+ ++ G    G+++ A+ +   +     
Sbjct: 275 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDC 334

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             D ++Y + I AL + G+ ++A  +F  M  K
Sbjct: 335 APDTISYTMFIEALYSIGRREEAEKVFETMVEK 367



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 104/197 (52%), Gaps = 9/197 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +PN + Y  +++G  ++     AL L++ +       G++  P+TVTY T+I+ LCK   
Sbjct: 405 KPNRYIYTMIMDGFVKSSRLEEALELYQRILKD----GIL--PSTVTYNTVINALCKLKK 458

Query: 76  VDKAKELFLKM--KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           +D+A EL  +M  + E + P++VTY+ +IHG         A  L  EM+D GV P+  ++
Sbjct: 459 MDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTY 518

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
             ++  L   GK+  A  LLE M++ G+ P+   Y TL+   C +  V+ A +L   M  
Sbjct: 519 TSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMR 577

Query: 194 MGCKHNVFSYSILINGY 210
            G   N F++  +  G+
Sbjct: 578 NGHTPNEFTFKAVEKGF 594



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 60/176 (34%), Positives = 91/176 (51%), Gaps = 5/176 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ ++   G  P+  TYNT+IN LC+      AL L  EM     E     +P+ V
Sbjct: 426 EALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEEL----EPSIV 481

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ II GL K G  ++A +L  +M D  + P+  TY SLI     A   + A  L  EM
Sbjct: 482 TYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEM 541

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +  G+ P+  ++  ++  LC++  +D A  LL+ M++ G  PN F +  +  GF L
Sbjct: 542 LKAGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEKGFRL 596


>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 567

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/327 (31%), Positives = 177/327 (54%), Gaps = 6/327 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++ ++   G  P++F+Y  ++N  C+ G    A N  +EM          C+PN V
Sbjct: 239 KALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERS------CCEPNVV 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++IDG    G V  AK++   M ++ I  N  TY  LI G+C      +A+ LF  M
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCM 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++ +  +   + V+++  C  G++D+A R+ + M+++G++ N  + N+L++G+C  G V
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A E+ VSM+    K + + Y+ L++G+CK ++   A  L  EM +KG+   VV YNTL
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTL 472

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              LF +  VE A  +++ M + GVA +   Y T +D   K G    A+ +++      +
Sbjct: 473 LKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGF 532

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELF 328
              I  YN +I G CK  +L  A E+F
Sbjct: 533 TKSITLYNTMICGFCKMEKLVQAQEIF 559



 Score =  144 bits (364), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 150/285 (52%), Gaps = 6/285 (2%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           CEPNV TYN+LI+G    G    A  +   M+    E G+    N+ TYT +I G CK G
Sbjct: 287 CEPNVVTYNSLIDGYVSLGDVCGAKKVLALMS----EKGI--PENSRTYTLLIKGYCKRG 340

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +++A++LF  M ++N+  +   Y  LIH +C A   ++A  +   M+  G++ N V  N
Sbjct: 341 QMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICN 400

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N  CK G +++A+ +L  M    ++P+++ YNTL+DGFC      +A +L   M + 
Sbjct: 401 SLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G    V +Y+ L+        +E AL +++ M  +G+ P+ V Y TL    F++   +RA
Sbjct: 461 GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRA 520

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
             ++ +    G       Y T I G CK   +V+A E+F  ++ L
Sbjct: 521 MMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKEL 565



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 168/354 (47%), Gaps = 20/354 (5%)

Query: 26  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT----------------TIIDG 69
           ++  C+  H +    +++E+     E  V+CK N +                   T+ D 
Sbjct: 132 VSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDM 191

Query: 70  LCK----EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           + K    +G    A  +F  M      P++ + NSL+       +  +A  ++ +M+  G
Sbjct: 192 ILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG 251

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P++ S+ +++N  CK G++DEA   ++ M +    PN   YN+L+DG+   G V  A+
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAK 311

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++   M   G   N  +Y++LI GYCK  ++E A  L+  M+ K +  D  +Y  L    
Sbjct: 312 KVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAY 371

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +V+ A ++ D M + G+  +T    + I+G CK G++ +A E+  +++    + D 
Sbjct: 372 CTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDS 431

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             YN L+DG CK      A++L   +    +   VVTYN ++  L   G ++ A
Sbjct: 432 YGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHA 485



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 173/359 (48%), Gaps = 8/359 (2%)

Query: 11  RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
           R F   P VF  + ++      G T  AL +F+ M    G+ G V  P+  +  +++  L
Sbjct: 180 REFSFSPTVF--DMILKVYAEKGMTKFALCVFDNM----GKCGRV--PSLRSCNSLLSNL 231

Query: 71  CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
            + G   KA  ++ +M    I P++ +Y  +++ +C     +EA     EM     +PNV
Sbjct: 232 VQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNV 291

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           V++N +++     G +  A ++L LM + G+  N+  Y  L+ G+C  G++ +AE+LF  
Sbjct: 292 VTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGC 351

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M       +   Y +LI+ YC    ++ AL +   ML  G+K + VI N+L  G  ++  
Sbjct: 352 MMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGH 411

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           V +A ++   M+   +  D++ Y T +DG CK    ++A +L   +        +  YN 
Sbjct: 412 VNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNT 471

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+  L   G ++ A  ++  + +  +  + VTY  ++ A    G  D+A  ++ D  +K
Sbjct: 472 LLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSK 530



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 143/348 (41%), Gaps = 55/348 (15%)

Query: 77  DKAKELF-LKMKDENINPNVVTYNSLIHGFC----------YAND--------------W 111
           D + E F L  K     P+V +Y  ++H             Y N+              W
Sbjct: 113 DASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVW 172

Query: 112 NE------------------------------AKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +E                              A C+F  M   G  P++ S N +++ L 
Sbjct: 173 DELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLV 232

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           +NG+  +A  + E MI +G+ P+ F Y  +++ +C  GRV+ A      ME   C+ NV 
Sbjct: 233 QNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVV 292

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
           +Y+ LI+GY    ++ GA  + + M  KGI  +   Y  L  G  +  Q+E+A KLF  M
Sbjct: 293 TYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLFGCM 352

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
               +  D   Y   I   C  G + +A+ +   +  +  +++    N LI+G CK G +
Sbjct: 353 MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHV 412

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             A E+  S+    L  D   YN ++   C      KA  L  +M  K
Sbjct: 413 NKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNK 460


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V     L+NG C+ G    A  +F+EM       G+   PN VTYT ++ G    G  +
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMP----LLGLA--PNEVTYTALMHGYFTHGQRE 90

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K   LF +M+   + PN+ TYN LI  +C   ++  A+ LF EM  +G+  NVVS+N ++
Sbjct: 91  KGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLI 150

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC++GK+ +A++LL++M   G RP+   +N L+DG+   G+++ A   F  M++ G +
Sbjct: 151 AGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQ 210

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  +Y++LI G+C+ +++  A    S+M  +G++P  V Y  L       + + +AF++
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
              M++ G+  D   Y   +  LC  G + +A +LF+++     E     Y+ +I G  +
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            G    A +L   + +  LI +  +Y + I  LC D K  +A  L  DME
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 163/307 (53%), Gaps = 2/307 (0%)

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           T +++G CK G V +A+ +F +M    + PN VTY +L+HG+       +   LF EM  
Sbjct: 42  TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            GV+PN+ ++N ++ E C+ G+ + A  L + M   G+  N   YNTL+ G C  G++  
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A +L   M + G + ++ ++++L++GY K  ++  AL  +++M + G +P  V YN L  
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G      + RA +   +M+  G+      Y   ID   +  ++ +A E+   +     E+
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEV 281

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           D   Y  L+  LC  G +K A +LF+S+  +GV  ++V+ Y++MI+    +G   KA  L
Sbjct: 282 DAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVI-YDMMIYGYGREGSSYKALKL 340

Query: 363 FLDMEAK 369
            ++M  K
Sbjct: 341 IMEMRQK 347



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 153/296 (51%), Gaps = 6/296 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF ++R  G EPN++TYN LI   CRTG    A +LF+EM       G+V   N V+Y 
Sbjct: 94  ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP----VRGIV--RNVVSYN 147

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC+ G +  A +L   M+ E   P+++T+N L+ G+  A   + A   F +M   
Sbjct: 148 TLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAA 207

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP+ V++N+++   C+   M  A+R L  M + G+ P    Y  L+D F     + +A
Sbjct: 208 GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA 267

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            E+   ME  G + +  +Y +L+   C    ++ A  L+  M  KG++P  VIY+ +  G
Sbjct: 268 FEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYG 327

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                   +A KL  EM++ G+  ++ +Y   I  LCK+    EA  L   +  ++
Sbjct: 328 YGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIR 383



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 6/260 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF ++ V G   NV +YNTLI GLCR G    A  L + M           +P+ +T
Sbjct: 127 ARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEG------TRPSIIT 180

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++DG  K G +  A   F +MK     P+ VTYN LI GFC A D   A     +M 
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G++P  V++ ++++   +   M +A  +L  M + G+  +A  Y  L+   C+ G + 
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMK 300

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +LF SM   G + +   Y ++I GY +      AL L  EM  KG+ P+   Y    
Sbjct: 301 DARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTI 360

Query: 243 IGLFEIHQVERAFKLFDEMQ 262
             L +  + + A  L D+M+
Sbjct: 361 RVLCKDDKCQEAEALLDDME 380



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 92/195 (47%), Gaps = 1/195 (0%)

Query: 175 FCLTGRVNRAEELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            C  G V  A  +     +S     +V + + L+NG CK  ++  A  ++ EM   G+ P
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           + V Y  L  G F   Q E+ F LF+EM+R GV  + + Y   I   C+ G    A  LF
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             + +     ++ +YN LI GLC+ G+L  A +L   +        ++T+N+++      
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 354 GKMDKARDLFLDMEA 368
           GKM  A   F  M+A
Sbjct: 192 GKMSNALPFFNQMKA 206



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 1/120 (0%)

Query: 251 VERAFKLFDEMQRHGVAA-DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           V  A  +     + G AA D  A    ++G CK G + EA  +F  + +L    +   Y 
Sbjct: 18  VRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYT 77

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L+ G    G+ +  + LF  + RG +  ++ TYN +I   C  G+ ++AR LF +M  +
Sbjct: 78  ALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVR 137


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 185/350 (52%), Gaps = 6/350 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V     L+NG C+ G    A  +F+EM       G+   PN VTYT ++ G    G  +
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMP----LLGLA--PNEVTYTALMHGYFTHGQRE 90

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K   LF +M+   + PN+ TYN LI  +C   ++  A+ LF EM  +G+  NVVS+N ++
Sbjct: 91  KGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLI 150

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC++GK+ +A++LL++M   G RP+   +N L+DG+   G+++ A   F  M++ G +
Sbjct: 151 AGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQ 210

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  +Y++LI G+C+ +++  A    S+M  +G++P  V Y  L       + + +AF++
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
              M++ G+  D   Y   +  LC  G + +A +LF+++     E     Y+ +I G  +
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            G    A +L   + +  LI +  +Y + I  LC D K  +A  L  DME
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDME 380



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 163/307 (53%), Gaps = 2/307 (0%)

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           T +++G CK G V +A+ +F +M    + PN VTY +L+HG+       +   LF EM  
Sbjct: 42  TALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRR 101

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            GV+PN+ ++N ++ E C+ G+ + A  L + M   G+  N   YNTL+ G C  G++  
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A +L   M + G + ++ ++++L++GY K  ++  AL  +++M + G +P  V YN L  
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G      + RA +   +M+  G+      Y   ID   +  ++ +A E+   +     E+
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEV 281

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           D   Y  L+  LC  G +K A +LF+S+  +GV  ++V+ Y++MI+    +G   KA  L
Sbjct: 282 DAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVI-YDMMIYGYGREGSSYKALKL 340

Query: 363 FLDMEAK 369
            ++M  K
Sbjct: 341 IMEMRQK 347



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 153/296 (51%), Gaps = 6/296 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF ++R  G EPN++TYN LI   CRTG    A +LF+EM       G+V   N V+Y 
Sbjct: 94  ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP----VRGIV--RNVVSYN 147

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC+ G +  A +L   M+ E   P+++T+N L+ G+  A   + A   F +M   
Sbjct: 148 TLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAA 207

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP+ V++N+++   C+   M  A+R L  M + G+ P    Y  L+D F     + +A
Sbjct: 208 GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA 267

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            E+   ME  G + +  +Y +L+   C    ++ A  L+  M  KG++P  VIY+ +  G
Sbjct: 268 FEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYG 327

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                   +A KL  EM++ G+  ++ +Y   I  LCK+    EA  L   +  ++
Sbjct: 328 YGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIR 383



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 6/260 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A +LF ++ V G   NV +YNTLI GLCR G    A  L + M           +P+ +T
Sbjct: 127 ARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEG------TRPSIIT 180

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +  ++DG  K G +  A   F +MK     P+ VTYN LI GFC A D   A     +M 
Sbjct: 181 FNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMK 240

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++G++P  V++ ++++   +   M +A  +L  M + G+  +A  Y  L+   C+ G + 
Sbjct: 241 ERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMK 300

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +LF SM   G + +   Y ++I GY +      AL L  EM  KG+ P+   Y    
Sbjct: 301 DARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTI 360

Query: 243 IGLFEIHQVERAFKLFDEMQ 262
             L +  + + A  L D+M+
Sbjct: 361 RVLCKDDKCQEAEALLDDME 380



 Score = 95.1 bits (235), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 1/195 (0%)

Query: 175 FCLTGRVNRAEELFVSMESMG-CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            C  G V  A  +       G    +V + + L+NG CK  ++  A  ++ EM   G+ P
Sbjct: 12  LCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAP 71

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           + V Y  L  G F   Q E+ F LF+EM+R GV  + + Y   I   C+ G    A  LF
Sbjct: 72  NEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLF 131

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             + +     ++ +YN LI GLC+ G+L  A +L   +        ++T+N+++      
Sbjct: 132 DEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKA 191

Query: 354 GKMDKARDLFLDMEA 368
           GKM  A   F  M+A
Sbjct: 192 GKMSNALPFFNQMKA 206



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 1/120 (0%)

Query: 251 VERAFKLFDEMQRHGVAA-DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
           V  A  +     + G AA D  A    ++G CK G + EA  +F  + +L    +   Y 
Sbjct: 18  VRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYT 77

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L+ G    G+ +  + LF  + RG +  ++ TYN +I   C  G+ ++AR LF +M  +
Sbjct: 78  ALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVR 137


>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
          Length = 579

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++      P  + YNT+I G    G    A  L E +          C P+ V
Sbjct: 36  EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG------CIPSVV 89

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +I+  L K+  VD+A  LF  MK ++  PN  TYN +I   C      EA  +  EM
Sbjct: 90  SFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 148

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN+++ N++++ LCK  K++EA ++ E   Q G  P+   Y +L+DG    G+V
Sbjct: 149 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 208

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M   G   N   Y+ LI  +  +   E    ++ E++ +G KPD+ + NT 
Sbjct: 209 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTY 268

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              +F+  +VE+   +F++++ +G   D  +Y   I GL K G   E   +F  ++   +
Sbjct: 269 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 328

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD RAYN ++DG CKSG++  A+E+   +    +   V TY  ++  L    ++D+A  
Sbjct: 329 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYM 388

Query: 362 LFLDMEAK 369
           LF + ++K
Sbjct: 389 LFEEAKSK 396



 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 202/403 (50%), Gaps = 50/403 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A+LF         PN+ T N +++ LC+      A  +FE  A+  G     C P+ 
Sbjct: 148 MEHASLF---------PNLLTVNIMVDRLCKARKLEEAYKIFES-ASQRG-----CNPDC 192

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY ++IDGL K+G VD+A  LF KM D   N N V Y SLI  F       +   +F E
Sbjct: 193 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 252

Query: 121 MMDQGVQPN-----------------------------------VVSFNVIMNELCKNGK 145
           ++ +G +P+                                   V S++++++ L K G+
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             E S +   M Q G   +A  YN ++DGFC +G+V++A E+   M+    +  V +Y  
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 372

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++G  K   ++ A  L+ E  SKGI+ +VV+Y++L  G  ++ +++ A+ + +EM + G
Sbjct: 373 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 432

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  + + + + +D L K   I EA+  F++++ +K   +   Y+ LI+GLC+  +   A+
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 492

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             ++ + +  L+ +VVTY  MI  L   G +  A  LF   +A
Sbjct: 493 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKA 535



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 185/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +LR  GC P+V ++N+++  L +      AL+LFE M           +PN+ 
Sbjct: 71  DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSS 123

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  IID LC  G V++A  +  +M+  ++ PN++T N ++   C A    EA  +F   
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ V++  +++ L K G++DEA RL E M+  G   N  VY +L+  F + GR 
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               ++F  +   GCK ++   +  ++   K  E+E    ++ ++ S G  PDV  Y+ L
Sbjct: 244 EDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 303

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E+   ++    
Sbjct: 304 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 363

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  Y  ++DGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A  
Sbjct: 364 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 423

Query: 362 LFLDMEAK 369
           +  +M  K
Sbjct: 424 ILEEMMKK 431



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 157/286 (54%), Gaps = 6/286 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F  +R +G  P+V +Y+ LI+GL + G      N+F  M      F +    +   Y  
Sbjct: 284 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNA 337

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++DG CK G V KA E+  +MK++ + P V TY +++ G    +  +EA  LF E   +G
Sbjct: 338 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 397

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ NVV ++ +++   K G++DEA  +LE M++ G+ PN + +N+L+D       +N A 
Sbjct: 398 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 457

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F SM+ M C  N ++YSILING C+ ++   A   + +M  +G+ P+VV Y T+  GL
Sbjct: 458 VCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 517

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            ++  +  A+ LF+  + +G   D  ++   I+G+      +EA +
Sbjct: 518 AKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 563



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 173/348 (49%), Gaps = 36/348 (10%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           KP+ V+YT++I  LCK G + +A+ELF +M+ E   P    YN++I G+  A  + +A  
Sbjct: 15  KPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYK 74

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L   + ++G  P+VVSFN I+  L K  K+DEA  L E+M +    PN+  YN ++D  C
Sbjct: 75  LLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLC 133

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           L GRV  A  +   ME      N+ + +I+++  CK +++E A  ++     +G  PD V
Sbjct: 134 LGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCV 193

Query: 237 IYNTLFIGLFEIHQVERAFKLFD-----------------------------------EM 261
            Y +L  GL +  QV+ A++LF+                                   E+
Sbjct: 194 TYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKEL 253

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            R G   D     T++D + K G + +   +F  +R   +  D+R+Y+ LI GL K+G+ 
Sbjct: 254 IRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQA 313

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +    +F ++ +     D   YN ++   C  GK+ KA ++  +M+ K
Sbjct: 314 RETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 361



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 163/321 (50%), Gaps = 6/321 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F +L   GC+P++   NT ++ + + G       +FE++ +    +G +  P+  +Y+ 
Sbjct: 249 IFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS----YGFL--PDVRSYSI 302

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL K G   +   +F  MK +    +   YN+++ GFC +   ++A  +  EM ++ 
Sbjct: 303 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 362

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           VQP V ++  I++ L K  ++DEA  L E     G+  N  +Y++L+DGF   GR++ A 
Sbjct: 363 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 422

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +   M   G   NV++++ L++   K +EI  AL  +  M      P+   Y+ L  GL
Sbjct: 423 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 482

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             + +  +AF  + +MQ+ G+  +   Y T I GL K G I +A  LF   +      D 
Sbjct: 483 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDA 542

Query: 306 RAYNCLIDGLCKSGRLKIAWE 326
            ++N LI+G+  + R   A++
Sbjct: 543 ASFNALIEGMSNANRAMEAYQ 563



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 1/250 (0%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            F E+  QG++P+ VS+  ++  LCK G++ EA  L   M      P A+ YNT++ G+ 
Sbjct: 5   FFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYG 64

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR   A +L   +   GC  +V S++ ++    K ++++ ALSL+ E++ K  +P+  
Sbjct: 65  SAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF-EVMKKDAEPNSS 123

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +   L    +VE A+++ DEM+   +  +       +D LCK   + EA ++F + 
Sbjct: 124 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 183

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D   Y  LIDGL K G++  A+ LF  +      A+ V Y  +I      G+ 
Sbjct: 184 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 243

Query: 357 DKARDLFLDM 366
           +    +F ++
Sbjct: 244 EDGHKIFKEL 253



 Score = 40.4 bits (93), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 27/47 (57%)

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +AW+ F  L    L  D V+Y  MI  LC  G++ +A +LF  MEA+
Sbjct: 1   MAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 47



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 8/70 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A   +  ++  G  PNV TY T+I+GL + G+   A +LFE   ANG    G+   P+ 
Sbjct: 490 KAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANG----GI---PDA 542

Query: 61  VTYTTIIDGL 70
            ++  +I+G+
Sbjct: 543 ASFNALIEGM 552


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 180/358 (50%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L  + +  GC P+V  YN ++  L + G    AL  FEEM            PN  
Sbjct: 356 EAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA-------PNLS 408

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LCK G V+ A ++   MK+  + PNV+T N +I   C A   +EA  +F  M
Sbjct: 409 TYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGM 468

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +   P+ V+F  +++ L K G++D+A RL E M+     PNA VY +L+  F   GR 
Sbjct: 469 NHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRK 528

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               ++F  M   GC  ++   +  ++   K  E     +L+ E+ S+G  PDV+ Y+ L
Sbjct: 529 EDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSIL 588

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +       ++LF  M+  G   DT AY TFIDG CK+G + +A +L   ++    
Sbjct: 589 IHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGR 648

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +  +  Y  +IDGL K  RL  A+ LF       L  +VV Y+ +I      G++D+A
Sbjct: 649 QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEA 706



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 185/356 (51%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  PNV T N +I+ LC+      A ++FE M +       +C P+ VT+ ++IDGL K+
Sbjct: 437 GLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHK------ICSPDEVTFCSLIDGLGKQ 490

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A  L+ +M D +  PN V Y SLI  F       +   +F EM+ +G  P++   
Sbjct: 491 GRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLL 550

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N  M+ + K G+  +   L E +   G  P+   Y+ L+ G    G      ELF +M+ 
Sbjct: 551 NAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKE 610

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            GC  +  +Y+  I+G+CK+ ++  A  L  EM +KG +P VV Y ++  GL +I +++ 
Sbjct: 611 QGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDE 670

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A+ LF+E + +G+  +   Y + IDG  K G I EA  +   L       ++  +NCL+D
Sbjct: 671 AYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 730

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            L K+  +  A   F+++       + +TY+I+I+ LC   K +KA   + +M+ +
Sbjct: 731 ALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQ 786



 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 165/313 (52%), Gaps = 6/313 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF +++  G  P+V +Y+ LI+GL + G       LF  M          C  +T  Y 
Sbjct: 568 ALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG------CVLDTHAYN 621

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T IDG CK G V+KA +L  +MK +   P VVTY S+I G    +  +EA  LF E    
Sbjct: 622 TFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 681

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV ++ +++   K G++DEA  ++E ++Q G+ PN + +N L+D       +N A
Sbjct: 682 GLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 741

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F +M+++    N  +YSILING C+ ++   A   + EM  +G+KP+ + Y T+  G
Sbjct: 742 LVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAG 801

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +   +  A  LF+  + +G   D+ +Y   I+GL  +   +EA ++F   R+    + 
Sbjct: 802 LAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIH 861

Query: 305 IRAYNCLIDGLCK 317
            +    L+D L K
Sbjct: 862 TKTCIALLDALQK 874



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/363 (31%), Positives = 176/363 (48%), Gaps = 9/363 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNT 60
           EA  +F ++      P  + YNT+I G    G    A +L E + A G       C P+ 
Sbjct: 321 EAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARG-------CIPSV 373

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  I+  L K+G + +A   F +MK ++  PN+ TYN LI   C A +   A  +   
Sbjct: 374 IAYNCILTCLGKKGRLGEALRTFEEMK-KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDA 432

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G+ PNV++ N++++ LCK  K+DEA  + E M      P+   + +L+DG    GR
Sbjct: 433 MKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGR 492

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  L+  M       N   Y+ LI  + K    E    ++ EM+ +G  PD+ + N 
Sbjct: 493 VDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNA 552

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               +F+  +  +   LF+E++  G   D  +Y   I GL K G+  E  ELF  ++   
Sbjct: 553 YMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQG 612

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             LD  AYN  IDG CKSG++  A++L   +        VVTY  +I  L    ++D+A 
Sbjct: 613 CVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAY 672

Query: 361 DLF 363
            LF
Sbjct: 673 MLF 675



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/326 (32%), Positives = 173/326 (53%), Gaps = 12/326 (3%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F ++   GC P++   N  ++ + + G T     LFEE+ +     G +  P+ ++Y+ 
Sbjct: 534 IFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSR----GFI--PDVMSYSI 587

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL K GF  +  ELF  MK++    +   YN+ I GFC +   N+A  L  EM  +G
Sbjct: 588 LIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKG 647

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            QP VV++  +++ L K  ++DEA  L E     G+  N  +Y++L+DGF   G+V R +
Sbjct: 648 RQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGF---GKVGRID 704

Query: 186 ELFVSMESM---GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           E ++ ME +   G   NV++++ L++   K +EI  AL  +  M +    P+ + Y+ L 
Sbjct: 705 EAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILI 764

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL  + +  +AF  + EMQ+ G+  +T  Y T I GL K G I EA  LF   +     
Sbjct: 765 NGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGV 824

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELF 328
            D  +YN +I+GL  S R   A+++F
Sbjct: 825 PDSASYNAIIEGLSYSRRAMEAYKIF 850



 Score =  163 bits (413), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 173/367 (47%), Gaps = 7/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   F +++  G  P+  TY ++I  LC+      A+ +FE+M            P    
Sbjct: 287 AWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRN------VPCAYA 340

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T+I G    G  D+A  L  + K     P+V+ YN ++          EA   F E M
Sbjct: 341 YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTF-EEM 399

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PN+ ++NV+++ LCK G+++ A ++ + M + G+ PN    N ++D  C   +++
Sbjct: 400 KKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLD 459

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +F  M    C  +  ++  LI+G  K   ++ A  LY +ML     P+ V+Y +L 
Sbjct: 460 EACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLI 519

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
              F+  + E   K+F EM   G + D      ++D + K G   +   LF  ++   + 
Sbjct: 520 KSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFI 579

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+ +Y+ LI GL K+G  +  +ELF ++     + D   YN  I   C  GK++KA  L
Sbjct: 580 PDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQL 639

Query: 363 FLDMEAK 369
             +M+ K
Sbjct: 640 LEEMKTK 646



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 151/308 (49%), Gaps = 7/308 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF  ++  GC  +   YNT I+G C++G    A  L EEM     +      P  V
Sbjct: 600 ETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQ------PTVV 653

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY ++IDGL K   +D+A  LF + K   +  NVV Y+SLI GF      +EA  +  E+
Sbjct: 654 TYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEEL 713

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV ++N +++ L K  +++EA    + M  +   PN   Y+ L++G C   + 
Sbjct: 714 MQKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKF 773

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A   +  M+  G K N  +Y+ +I G  K   I  A SL+    + G  PD   YN +
Sbjct: 774 NKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAI 833

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-ILK 300
             GL    +   A+K+F+E +  G    T      +D L K+  + +A  +   LR I K
Sbjct: 834 IEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAK 893

Query: 301 YELDIRAY 308
            +   R++
Sbjct: 894 SQHAARSW 901



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 145/312 (46%), Gaps = 1/312 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+T T   +I    K   + +  +L   M+     P    Y +LI       + +    L
Sbjct: 161 PSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTL 220

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +M + G + +V  F  ++    + G++D A  LL+ M    +  +  +YN  +D F  
Sbjct: 221 FHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGK 280

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+V+ A + F  ++S G   +  +Y+ +I   CK   ++ A+ ++ +M      P    
Sbjct: 281 AGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYA 340

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YNT+ +G     + + A+ L +  +  G      AY   +  L K G + EA+  F  ++
Sbjct: 341 YNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMK 400

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 ++  YN LID LCK+G ++ A+++  ++    L  +V+T NIMI  LC   K+D
Sbjct: 401 -KDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLD 459

Query: 358 KARDLFLDMEAK 369
           +A  +F  M  K
Sbjct: 460 EACSIFEGMNHK 471



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 143/310 (46%), Gaps = 1/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P    YTT+I  L      D    LF +M++     +V  + ++I  F      + A  
Sbjct: 195 RPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALS 254

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM    +  ++V +NV ++   K GK+D A +    +   G+ P+   Y +++   C
Sbjct: 255 LLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLC 314

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R++ A E+F  ME        ++Y+ +I GY    + + A SL     ++G  P V+
Sbjct: 315 KGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVI 374

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +   L +  ++  A + F+EM++   A +   Y   ID LCK G +  A ++   +
Sbjct: 375 AYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAAFKVRDAM 433

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           +      ++   N +ID LCK+ +L  A  +F  +   +   D VT+  +I  L   G++
Sbjct: 434 KEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRV 493

Query: 357 DKARDLFLDM 366
           D A  L+  M
Sbjct: 494 DDAYRLYEQM 503



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 121/275 (44%), Gaps = 36/275 (13%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM   G  P+  +   ++    K+ K+ E   L++ M +   RP    Y TL+       
Sbjct: 153 EMSIAGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQ 212

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
             +    LF  M+ +G + +V  ++ +I  + +   ++ ALSL  EM S  +  D+V+YN
Sbjct: 213 ESDIMLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYN 272

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR-- 297
                  +  +V+ A+K F E++ HG+  D   Y + I  LCK   + EAVE+F  +   
Sbjct: 273 VCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQN 332

Query: 298 ------------ILKY----ELD-----------------IRAYNCLIDGLCKSGRLKIA 324
                       I+ Y    + D                 + AYNC++  L K GRL  A
Sbjct: 333 RNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEA 392

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              F  + +     ++ TYN++I  LC  G+++ A
Sbjct: 393 LRTFEEMKKDA-APNLSTYNVLIDMLCKAGEVEAA 426


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 192/420 (45%), Gaps = 58/420 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F ++R  GC PNV TY  LI+   +      A  LFE M +        C PN V
Sbjct: 536 QARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG------CLPNIV 589

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM-----------------KDENINPNVVTYNSLIHG 104
           TY+ +IDG CK G ++KA ++F +M                  D +  PNVV Y +L+ G
Sbjct: 590 TYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDG 649

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           FC  +   EA+ L   M  +G +PN + ++ +++ LCK GK+DEA  +   M + G    
Sbjct: 650 FCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPAT 709

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
            + Y++L+D +    R + A ++   M    C  NV  Y+ +I+G CK  + + A  L  
Sbjct: 710 LYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQ 769

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            M  KG +P+VV Y  +  G   I ++E   +L + M   GVA +   YR  ID  CKNG
Sbjct: 770 MMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNG 829

Query: 285 YIVEAVELFRTLRILKYE-----------------------LD----------IRAYNCL 311
            +  A  L   ++   +                        LD          +  Y  L
Sbjct: 830 ALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLL 889

Query: 312 IDGLCKSGRLKIAWELFRSLP--RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +D L K+ RL++A  L   +      L+    TYN +I +LC   K+DKA  LF +M  K
Sbjct: 890 VDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKK 949



 Score =  157 bits (396), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 168/353 (47%), Gaps = 15/353 (4%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FT       LC+ G    AL L E       E  V   P+TV YT +I GLC+    ++A
Sbjct: 271 FTLRCYAYSLCKVGKWREALTLMET------ENFV---PDTVFYTKLISGLCEASLFEEA 321

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            +   +M+  +  PNVVTY++L+ G          K +   MM +G  P+   FN +++ 
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC------LTGRVNRAEELFVSMES 193
            C +G    A +LL+ M++ G  P   VYN L+   C          +  AE+ +  M +
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLA 441

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   N  + S      C   + E A S+  EM+ +G  PD   Y+ +   L    ++E 
Sbjct: 442 TGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMEL 501

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF LF+EM+R G+ AD + Y   +D  CK G I +A + F  +R +    ++  Y  LI 
Sbjct: 502 AFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIH 561

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              K+ ++  A ELF ++     + ++VTY+ +I   C  G+M+KA  +F  M
Sbjct: 562 AYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERM 614



 Score =  154 bits (390), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 175/414 (42%), Gaps = 64/414 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P+   +N+L++  C +G    A  L ++M            P  V Y  +I  +C +
Sbjct: 367 GCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH------TPGYVVYNILIGSICGD 420

Query: 74  G------FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   ++ A++ + +M    +  N +  +S     C A  + +A  +  EM+ QG  
Sbjct: 421 KDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFI 480

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  +++ ++  LC   KM+ A  L E M + G+  + + Y  ++D FC  G + +A + 
Sbjct: 481 PDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI---------------- 231
           F  M  +GC  NV +Y+ LI+ Y K K++  A  L+  MLS+G                 
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600

Query: 232 ------------------------------------KPDVVIYNTLFIGLFEIHQVERAF 255
                                               +P+VVIY  L  G  ++H+VE A 
Sbjct: 601 AGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEAR 660

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           KL D M   G   +   Y   IDGLCK G + EA E+   +    +   +  Y+ LID  
Sbjct: 661 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRY 720

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            K  R  +A ++   +       +VV Y  MI  LC  GK D+A  L   ME K
Sbjct: 721 FKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 774



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 153/332 (46%), Gaps = 51/332 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
           EA  L   + + GCEPN   Y+ LI+GLC+ G    A  +  EM+               
Sbjct: 658 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLI 717

Query: 49  NGEFGV----------------VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
           +  F V                 C PN V YT +IDGLCK G  D+A +L   M+++   
Sbjct: 718 DRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQ 777

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTY ++I GF           L   M  +GV PN V++ V+++  CKNG +D A  L
Sbjct: 778 PNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNL 837

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS---------Y 203
           LE M Q     +A  Y  +++GF          + F+  ES+G    +           Y
Sbjct: 838 LEEMKQTHWPTHAAGYRKVIEGF---------NKEFI--ESLGLLDEIGQDDTAPFLSLY 886

Query: 204 SILINGYCKNKEIEGALSLYSEM--LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +L++   K + +E AL L  E+   S  +      YN+L   L   ++V++AF+LF EM
Sbjct: 887 RLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEM 946

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            + GV  +   + + I GL +N  I EA+ L 
Sbjct: 947 SKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 160/364 (43%), Gaps = 15/364 (4%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           +L+ F   P+  TYN LI    +      A  +  EM+  N       + +  T      
Sbjct: 225 RLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLAN------LRMDGFTLRCYAY 278

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK G   K +E    M+ EN  P+ V Y  LI G C A+ + EA      M      P
Sbjct: 279 SLCKVG---KWREALTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV+++ ++       ++    R+L +M+  G  P+  ++N+L+  +C +G  + A +L 
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKE------IEGALSLYSEMLSKGIKPDVVIYNTLF 242
             M   G       Y+ILI   C +K+      +E A   YSEML+ G+  + +  ++  
Sbjct: 396 KKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFT 455

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L    + E+AF +  EM   G   DT  Y   +  LC    +  A  LF  ++     
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLV 515

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D+  Y  ++D  CK+G ++ A + F  +       +VVTY  +IHA     K+  A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 363 FLDM 366
           F  M
Sbjct: 576 FETM 579



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 157/351 (44%), Gaps = 17/351 (4%)

Query: 23  NTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           N L+   CR+G   +AL   EE+    +  F    +P+  TY  +I    K   +D A  
Sbjct: 204 NVLVRKYCRSGSFSIAL---EELGRLKDFRF----RPSRSTYNCLIQAFLKADCLDSASL 256

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
           +  +M   N+  +  T     +  C    W EA  L   M  +   P+ V +  +++ LC
Sbjct: 257 VHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL---METENFVPDTVFYTKLISGLC 313

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           +    +EA   L  M      PN   Y+TL+ G     ++ R + +   M   GC  +  
Sbjct: 314 EASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPK 373

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL------FEIHQVERAF 255
            ++ L++ YC + +   A  L  +M+  G  P  V+YN L   +         H +E A 
Sbjct: 374 IFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAE 433

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           K + EM   GV  +     +F   LC  G   +A  + R +    +  D   Y+ ++  L
Sbjct: 434 KAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYL 493

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           C + ++++A+ LF  + RG L+ADV TY IM+ + C  G +++AR  F +M
Sbjct: 494 CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 93/232 (40%), Gaps = 45/232 (19%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   GC+PNV TY  +I+G  R G     L L E M    G  GV   PN V
Sbjct: 763 EAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERM----GSKGVA--PNYV 816

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID  CK G +D A  L  +MK  +   +   Y  +I GF    ++ E+  L  E+
Sbjct: 817 TYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGF--NKEFIESLGLLDEI 874

Query: 122 MDQGVQP----------NVV---------------------------SFNVIMNELCKNG 144
                 P          N++                           ++N ++  LC   
Sbjct: 875 GQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLAN 934

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           K+D+A RL   M + GV P    + +L+ G     +++ A  L   +  M C
Sbjct: 935 KVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLLDFISHMVC 986


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 188/366 (51%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A+ +  K+ + G  PNV TY T I GLC+ G   VA  L + +   N      C     
Sbjct: 228 RASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHC----- 282

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I GLC+ G +D+A E+F +MK+  I P+V +Y+ LI GFC     ++A  +F EM
Sbjct: 283 -FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM 341

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G+ PN+ S++++++  CK G++D+A  + E M   G+ P+ + Y+ L+DGFC  G +
Sbjct: 342 RNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 401

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A + +  M S     + F+Y  LI GY K+K+   AL  +  M   G+ PD +  N +
Sbjct: 402 DSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHI 461

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                      +A  L ++ Q +GV  + ++Y  FI  +C+     +A++L   +     
Sbjct: 462 LSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNV 521

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D+  Y+ LI    K    + A  LF  + +  +  +V TY I+I+   +D KMD A  
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 362 LFLDME 367
           LF  M+
Sbjct: 582 LFKGMK 587



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 186/364 (51%), Gaps = 8/364 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---NGEFGVVCKPNTVT 62
           LF  L  FG  PN+ TY  ++N  CR     V +    E+      +GE      PN VT
Sbjct: 193 LFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGE-----TPNVVT 247

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T I GLCK G    A  L   +  +N   N   +N++I+G C     +EA  +F EM 
Sbjct: 248 YGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMK 307

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ P+V S++++++  C+ G++D+AS + + M   G+ PN + Y+ L+DGFC  GRV+
Sbjct: 308 NSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVD 367

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A E+F  M++ G   +V+SYSILI+G+C+  +++ A+  + EM S    P    Y +L 
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G ++  Q   A K F  MQ+ G+  DT A    +   C+     +A+ L    +     
Sbjct: 428 KGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +  +YN  I  +C+    + A +L   + +  ++ DVV Y+ +I         +KA  L
Sbjct: 488 FNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVML 547

Query: 363 FLDM 366
           F+ M
Sbjct: 548 FIKM 551



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ +F +++  G  P+V++Y+ LI+G CR G    A  +F+EM N     G++  PN  
Sbjct: 298 EASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNS----GIL--PNIY 351

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ +IDG CKEG VDKA E+F +MK+  I P+V +Y+ LI GFC   D + A   + EM
Sbjct: 352 SYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEM 411

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P+  ++  ++    K+ +   A +   +M ++G+ P+    N ++  +C     
Sbjct: 412 TSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDF 471

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A  L    +  G   N +SY+  I+  C+    E AL L   ML + + PDVV Y+TL
Sbjct: 472 NKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTL 531

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +    E+A  LF +M + G+  +   Y   I+    +  +  A  LF+ ++  + 
Sbjct: 532 ISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRV 591

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D  AY  L+ G C +G +  A  LF  + R     +VVTY   I+      K ++A  
Sbjct: 592 YPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHK 651

Query: 362 LFLDMEAK 369
           L+  M+ +
Sbjct: 652 LYEKMKER 659



 Score =  174 bits (440), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 197/406 (48%), Gaps = 46/406 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ +F ++R  G  PN+++Y+ LI+G C+ G    AL +FEEM N     G++  P+  
Sbjct: 333 QASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNS----GIL--PDVY 386

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF---------------- 105
           +Y+ +IDG C++G +D A + + +M   N +P+   Y SLI G+                
Sbjct: 387 SYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM 446

Query: 106 -------------------CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
                              C   D+N+A  L  +  + GV  N  S+N  ++ +C+    
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVP 506

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN--RAEELFVSMESMGCKHNVFSYS 204
           ++A +LL +M++  V P+   Y+TL+   C   R+N  +A  LF+ M  +G   NV +Y+
Sbjct: 507 EKALQLLPVMLKRNVLPDVVNYSTLIS--CFAKRLNSEKAVMLFIKMTKVGITFNVKTYT 564

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
           ILIN +  + +++ A  L+  M    + PD + Y +L  G     ++ RA  LFDEM R 
Sbjct: 565 ILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSRE 624

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G + +   Y  FI+   K     +A +L+  ++      D   Y  LI   C +G +  A
Sbjct: 625 GCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRA 684

Query: 325 WELFRSLPR-GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             LF  + + G    +VV Y  +I++     K D+A  L+ +M AK
Sbjct: 685 EALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAK 730



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 142/283 (50%), Gaps = 4/283 (1%)

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           ++  + V ++ LI  F   +    A  +F+   D G++ N++S N ++  L ++ ++D  
Sbjct: 131 DVEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGV 190

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFC----LTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             L E++I+ G RPN   Y  +M+ FC     +  + RA E+   +   G   NV +Y  
Sbjct: 191 RLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGT 250

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            I G CK      A  L   +  K    +   +N +  GL +   ++ A ++F EM+  G
Sbjct: 251 YIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSG 310

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  D ++Y   IDG C+ G + +A E+F+ +R      +I +Y+ LIDG CK GR+  A 
Sbjct: 311 ILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKAL 370

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           E+F  +    ++ DV +Y+I+I   C  G MD A   + +M +
Sbjct: 371 EVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTS 413



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 7/216 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V  Y+TLI+   +  ++  A+ LF +M      F      N  TYT +I+    +  +
Sbjct: 523 PDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITF------NVKTYTILINLFISDCKM 576

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A  LF  MK+  + P+ + Y SL+ GFC   +   A+ LF EM  +G  PNVV++   
Sbjct: 577 DVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCF 636

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG- 195
           +NE  K  K ++A +L E M + GV P+  +Y  L+  FC TG +NRAE LF  M+  G 
Sbjct: 637 INEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGR 696

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           C  NV  Y+ LIN Y K  + + A  LY EM +KG+
Sbjct: 697 CTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 156/340 (45%), Gaps = 39/340 (11%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           + V +  +I        ++ A  +F++ KD+ I  N+++ N L+      N  +  + LF
Sbjct: 135 SNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLF 194

Query: 119 IEMMDQGVQPNVVSFNVIMNELCK----NGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             ++  G +PN+ ++ ++MN  C+    +  +  AS +L  +   G  PN   Y T + G
Sbjct: 195 EVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKG 254

Query: 175 FCLTG-------------RVNR----------------------AEELFVSMESMGCKHN 199
            C  G             R N+                      A E+F  M++ G   +
Sbjct: 255 LCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPD 314

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V+SYSILI+G+C+   ++ A  ++ EM + GI P++  Y+ L  G  +  +V++A ++F+
Sbjct: 315 VYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFE 374

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           EM+  G+  D ++Y   IDG C+ G +  A++ +  +    +      Y  LI G  KS 
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +   A + FR + +  +  D +  N ++   C     +KA
Sbjct: 435 QFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKA 474



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 154/368 (41%), Gaps = 104/368 (28%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM---------------- 45
           +A  +F +++  G  P+V++Y+ LI+G CR G    A+  +EEM                
Sbjct: 368 KALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLI 427

Query: 46  ---------ANGNGEFGVVCK----PNTV------------------------------- 61
                    AN   EF ++ K    P+T+                               
Sbjct: 428 KGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVH 487

Query: 62  ----TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC- 116
               +Y   I  +C+    +KA +L   M   N+ P+VV Y++LI   C+A   N  K  
Sbjct: 488 FNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLIS--CFAKRLNSEKAV 545

Query: 117 -LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            LFI+M   G+  NV ++ +++N    + KMD A RL + M +  V P+   Y +L+ GF
Sbjct: 546 MLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGF 605

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD- 234
           C TG + RA  LF  M   GC  NV +Y+  IN Y K  +   A  LY +M  +G+ PD 
Sbjct: 606 CNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQ 665

Query: 235 -----------------------------------VVIYNTLFIGLFEIHQVERAFKLFD 259
                                              VV+Y  L     ++++ ++A KL++
Sbjct: 666 ILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYE 725

Query: 260 EMQRHGVA 267
           EM+  G++
Sbjct: 726 EMRAKGLS 733



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 7/186 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF  ++     P+   Y +L+ G C TG    A  LF+EM+         C PN VT
Sbjct: 579 AYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREG------CSPNVVT 632

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT  I+   K    ++A +L+ KMK+  + P+ + Y  LI  FC   + N A+ LF EM 
Sbjct: 633 YTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMK 692

Query: 123 DQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            +G   PNVV +  ++N   K  K D+A +L E M   G+        ++ + +C   +V
Sbjct: 693 QEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQV 752

Query: 182 NRAEEL 187
            +  +L
Sbjct: 753 LKTGKL 758



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/224 (25%), Positives = 109/224 (48%), Gaps = 6/224 (2%)

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILI 207
           +A  L+ L++   V  +  V++ L+  F     +  A  +FV  +  G + N+ S + L+
Sbjct: 121 DAGELVSLLLD--VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLL 178

Query: 208 NGYCKNKEIEGALSLYSEMLSKGIKPDVVIY----NTLFIGLFEIHQVERAFKLFDEMQR 263
               ++  ++G   L+  ++  G +P++  Y    N    G+     + RA ++  ++  
Sbjct: 179 KCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYM 238

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G   +   Y T+I GLCK G    A  L + L      L+   +N +I GLC+ G L  
Sbjct: 239 SGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDE 298

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           A E+F+ +    ++ DV +Y+I+I   C  G++D+A ++F +M 
Sbjct: 299 ASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342



 Score = 48.1 bits (113), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 5/105 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ K++  G  P+   Y  LI   C TG    A  LF+EM          C PN V
Sbjct: 648 QAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGR-----CTPNVV 702

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 106
            YT +I+   K    D+A++L+ +M+ + ++    +  S+   +C
Sbjct: 703 MYTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 181/354 (51%), Gaps = 8/354 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A+ L  ++  FG  PN  T+N LI+G    G+   AL +F  M A G         P+ V
Sbjct: 317 ASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG-------LTPSEV 369

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  ++DGLCK    D A+  +++MK   +    +TY  +I G C     +EA  L  EM
Sbjct: 370 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 429

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ P++V+++ ++N  CK G+   A  ++  + ++G+ PN  +Y+TL+   C  G +
Sbjct: 430 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 489

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  ++ +M   G   + F++++L+   CK  ++  A      M S GI P+ V ++ L
Sbjct: 490 KEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL 549

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +  +AF +FDEM + G     + Y + + GLCK G++ EA +  ++L  +  
Sbjct: 550 INGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPA 609

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
            +D   YN L+  +CKSG L  A  LF  + +  ++ D  TY  +I  LC  GK
Sbjct: 610 AVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 663



 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 192/365 (52%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  +F  + ++G  P+V+T N ++  + ++G  +   +  +EM         +C P+  
Sbjct: 141 DSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK-----IC-PDVA 194

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I+ LC EG  +K+  L  KM+     P +VTYN+++H +C    +  A  L   M
Sbjct: 195 TFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 254

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV  +V ++N+++++LC++ ++ +   LL  M +  + PN   YNTL++GF   G+V
Sbjct: 255 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 314

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +L   M S G   N  +++ LI+G+      + AL ++  M +KG+ P  V Y  L
Sbjct: 315 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 374

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  + + A   +  M+R+GV      Y   IDGLCKNG++ EAV L   +     
Sbjct: 375 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGI 434

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + DI  Y+ LI+G CK GR K A E+   + R  L  + + Y+ +I+  C  G + +A  
Sbjct: 435 DPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIR 494

Query: 362 LFLDM 366
           ++  M
Sbjct: 495 IYEAM 499



 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +++ L  K+   G  P + TYNT+++  C+ G    A+ L + M +  G    VC     
Sbjct: 211 KSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKS-KGVDADVC----- 264

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I  LC+   + K   L   M+   I+PN VTYN+LI+GF        A  L  EM
Sbjct: 265 TYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEM 324

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+ PN V+FN +++     G   EA ++  +M   G+ P+   Y  L+DG C     
Sbjct: 325 LSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEF 384

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A   ++ M+  G      +Y+ +I+G CKN  ++ A+ L +EM   GI PD+V Y+ L
Sbjct: 385 DLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSAL 444

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++ + + A ++   + R G++ +   Y T I   C+ G + EA+ ++  + +  +
Sbjct: 445 INGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGH 504

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   +N L+  LCK+G++  A E  R +    ++ + V+++ +I+     G+  KA  
Sbjct: 505 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFS 564

Query: 362 LFLDM 366
           +F +M
Sbjct: 565 VFDEM 569



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 175/365 (47%), Gaps = 7/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A   +M+++  G      TY  +I+GLC+ G    A+ L  EM+    +      P+ VT
Sbjct: 387 ARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGID------PDIVT 440

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +I+G CK G    AKE+  ++    ++PN + Y++LI+  C      EA  ++  M+
Sbjct: 441 YSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI 500

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G   +  +FNV++  LCK GK+ EA   +  M   G+ PN   ++ L++G+  +G   
Sbjct: 501 LEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGL 560

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A  +F  M  +G     F+Y  L+ G CK   +  A      + +     D V+YNTL 
Sbjct: 561 KAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLL 620

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             + +   + +A  LF EM +  +  D++ Y + I GLC+ G  V A+   +        
Sbjct: 621 TAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNV 680

Query: 303 LDIRA-YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           L  +  Y C +DG+ K+G+ K        +       D+VT N MI      GK++K  D
Sbjct: 681 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 740

Query: 362 LFLDM 366
           L  +M
Sbjct: 741 LLPEM 745



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 178/369 (48%), Gaps = 18/369 (4%)

Query: 16  EPNVFTYNTLINGLCRTGHTIV-------ALNLFEEMANGNGE----FGVV------CKP 58
           +P + T + ++  +C T H +V       A ++ +E++  +G+    FG +      C  
Sbjct: 63  QPGLET-DHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNS 121

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y  +I    +EG +  + E+F  M     NP+V T N+++     + +        
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 181

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM+ + + P+V +FN+++N LC  G  +++S L++ M + G  P    YNT++  +C  
Sbjct: 182 KEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKK 241

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           GR   A EL   M+S G   +V +Y++LI+  C++  I     L  +M  + I P+ V Y
Sbjct: 242 GRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTY 301

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  G     +V  A +L +EM   G++ +   +   IDG    G   EA+++F  +  
Sbjct: 302 NTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 361

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                   +Y  L+DGLCK+    +A   +  + R  +    +TY  MI  LC +G +D+
Sbjct: 362 KGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDE 421

Query: 359 ARDLFLDME 367
           A  L  +M 
Sbjct: 422 AVVLLNEMS 430



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 192/398 (48%), Gaps = 32/398 (8%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG----------- 50
            +A +LF ++      P+ +TY +LI+GLCR G T++A+ LF + A   G           
Sbjct: 631  KAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAI-LFAKEAEARGNVLPNKVMYTC 689

Query: 51   -----------EFGVVCK---------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                       + G+  +         P+ VT   +IDG  + G ++K  +L  +M ++N
Sbjct: 690  FVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN 749

Query: 91   INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
              PN+ TYN L+HG+    D + +  L+  ++  G+ P+ ++ + ++  +C++  ++   
Sbjct: 750  GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL 809

Query: 151  RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            ++L+  I  GV  + + +N L+   C  G +N A +L   M S+G   +  +   +++  
Sbjct: 810  KILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVL 869

Query: 211  CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
             +N   + +  +  EM  +GI P+   Y  L  GL  +  ++ AF + +EM  H +    
Sbjct: 870  NRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPN 929

Query: 271  WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             A    +  L K G   EA  L R +  +K    I ++  L+   CK+G +  A EL   
Sbjct: 930  VAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVV 989

Query: 331  LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
            +    L  D+V+YN++I  LCA G M  A +L+ +M+ 
Sbjct: 990  MSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKG 1027



 Score =  147 bits (370), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 173/395 (43%), Gaps = 42/395 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A ++F ++   G  P  FTY +L+ GLC+ GH   A    + +        V    +T
Sbjct: 560 LKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL------HAVPAAVDT 613

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V Y T++  +CK G + KA  LF +M   +I P+  TY SLI G C       A     E
Sbjct: 614 VMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKE 673

Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
              +G V PN V +   ++ + K G+        E M  +G  P+    N ++DG+   G
Sbjct: 674 AEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMG 733

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ +  +L   M +     N+ +Y+IL++GY K K++  +  LY  ++  GI PD +  +
Sbjct: 734 KIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCH 793

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           +L +G+ E + +E   K+       GV  D + +   I   C NG I  A +L + +  L
Sbjct: 794 SLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSL 853

Query: 300 KYELD-----------------------------------IRAYNCLIDGLCKSGRLKIA 324
              LD                                    R Y  LI+GLC+ G +K A
Sbjct: 854 GISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTA 913

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + +   +    +    V  + M+ AL   GK D+A
Sbjct: 914 FVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 948



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 109/233 (46%), Gaps = 6/233 (2%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G E + +T+N LI+  C  G    A +L + M +     G+    +T     ++  L + 
Sbjct: 819  GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTS----LGISLDKDTCD--AMVSVLNRN 872

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
                +++ +  +M  + I+P    Y  LI+G C   D   A  +  EM+   + P  V+ 
Sbjct: 873  HRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE 932

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            + ++  L K GK DEA+ LL  M+++ + P    + TLM   C  G V  A EL V M +
Sbjct: 933  SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSN 992

Query: 194  MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
             G K ++ SY++LI G C   ++  A  LY EM   G   +   Y  L  GL 
Sbjct: 993  CGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 2/242 (0%)

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+V  +++++    + G + ++  +  LM   G  P+ +  N ++     +G        
Sbjct: 123 PSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSF 180

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M       +V +++ILIN  C     E +  L  +M   G  P +V YNT+     +
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             + + A +L D M+  GV AD   Y   I  LC++  I +   L R +R      +   
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN LI+G    G++ IA +L   +    L  + VT+N +I    ++G   +A  +F  ME
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMME 360

Query: 368 AK 369
           AK
Sbjct: 361 AK 362



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 12/278 (4%)

Query: 6    LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV---T 62
            L+  + + G  P+  T ++L+ G+C +    + L + +           +C+   V   T
Sbjct: 776  LYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILK---------AFICRGVEVDRYT 826

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            +  +I   C  G ++ A +L   M    I+ +  T ++++      + + E++ +  EM 
Sbjct: 827  FNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS 886

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             QG+ P    +  ++N LC+ G +  A  + E MI   + P     + ++      G+ +
Sbjct: 887  KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 946

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A  L   M  M     + S++ L++  CKN  +  AL L   M + G+K D+V YN L 
Sbjct: 947  EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
             GL     +  AF+L++EM+  G  A+   Y+  I GL
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGL 1044



 Score = 78.2 bits (191), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 99/243 (40%), Gaps = 22/243 (9%)

Query: 129 NVVSFNVIMNELCKNGKMDEASR--LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
           ++V    I   +    +M + +R  L EL +  G   ++FV+  LM  + L         
Sbjct: 70  HIVQLVCITTHILVRARMYDPARHILKELSLMSG--KSSFVFGALMTTYRL--------- 118

Query: 187 LFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
                    C  N   Y ILI  Y +   I+ +L ++  M   G  P V   N +   + 
Sbjct: 119 ---------CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVV 169

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  +    +    EM +  +  D   +   I+ LC  G   ++  L + +    Y   I 
Sbjct: 170 KSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIV 229

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            YN ++   CK GR K A EL   +    + ADV TYN++IH LC   ++ K   L  DM
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 367 EAK 369
             +
Sbjct: 290 RKR 292



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 6/85 (7%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            +EA  L + +   G + ++ +YN LI GLC  G   +A  L+EEM  G+G        N 
Sbjct: 981  IEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM-KGDGFLA-----NA 1034

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLK 85
             TY  +I GL          ++ LK
Sbjct: 1035 TTYKALIRGLLARETAFSGADIILK 1059


>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
          Length = 716

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 185/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++      P  + YNT+I G    G    A  L E +          C P+ V
Sbjct: 168 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG------CIPSVV 221

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +I+  L K+  VD+A  LF  MK ++  PN  TYN +I   C      EA  +  EM
Sbjct: 222 SFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM 280

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               + PN+++ N++++ LCK  K++EA ++ E   Q G  P+   Y +L+DG    G+V
Sbjct: 281 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 340

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF  M   G   N   Y+ LI  +  +   E    ++ E++ +G KPD+ + NT 
Sbjct: 341 DEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKPDLTLLNTY 400

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              +F+  +VE+   +F++++ +G   D  +Y   I GL K G   E   +F  ++   +
Sbjct: 401 MDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGF 460

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD RAYN ++DG CKSG++  A+E+   +    +   V TY  ++  L    ++D+A  
Sbjct: 461 ALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYM 520

Query: 362 LFLDMEAK 369
           LF + ++K
Sbjct: 521 LFEEAKSK 528



 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 201/398 (50%), Gaps = 50/398 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A+LF         PN+ T N +++ LC+      A  +FE  A+  G     C P+ 
Sbjct: 280 MEHASLF---------PNLLTVNIMVDRLCKARKLEEAYKIFES-ASQRG-----CNPDC 324

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF--------------- 105
           VTY ++IDGL K+G VD+A  LF KM D   N N V Y SLI  F               
Sbjct: 325 VTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKE 384

Query: 106 ------------------CY--ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                             C   A +  + + +F ++   G  P+V S++++++ L K G+
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             E S +   M Q G   +A  YN ++DGFC +G+V++A E+   M+    +  V +Y  
Sbjct: 445 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 504

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +++G  K   ++ A  L+ E  SKGI+ +VV+Y++L  G  ++ +++ A+ + +EM + G
Sbjct: 505 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 564

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  + + + + +D L K   I EA+  F++++ +K   +   Y+ LI+GLC+  +   A+
Sbjct: 565 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 624

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             ++ + +  L+ +VVTY  MI  L   G +  A  LF
Sbjct: 625 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLF 662



 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 198/404 (49%), Gaps = 44/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           +A AL  +++    EP++  YN  I+   + G+  +A   F E+ A G        KP+ 
Sbjct: 98  DALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQG-------LKPDD 150

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V+YT++I  LCK G + +A+ELF +M+ E   P    YN++I G+  A  + +A  L   
Sbjct: 151 VSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLER 210

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + ++G  P+VVSFN I+  L K  K+DEA  L E+M +    PN+  YN ++D  CL GR
Sbjct: 211 LRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVM-KKDAEPNSSTYNIIIDMLCLGGR 269

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V  A  +   ME      N+ + +I+++  CK +++E A  ++     +G  PD V Y +
Sbjct: 270 VEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS 329

Query: 241 LFIGLFEIHQVERAFKLFD-----------------------------------EMQRHG 265
           L  GL +  QV+ A++LF+                                   E+ R G
Sbjct: 330 LIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRG 389

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
              D     T++D + K G + +   +F  +R   +  D+R+Y+ LI GL K+G+ +   
Sbjct: 390 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 449

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +F ++ +     D   YN ++   C  GK+ KA ++  +M+ K
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEK 493



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/368 (29%), Positives = 185/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  +LR  GC P+V ++N+++  L +      AL+LFE M           +PN+ 
Sbjct: 203 DAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-------AEPNSS 255

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  IID LC  G V++A  +  +M+  ++ PN++T N ++   C A    EA  +F   
Sbjct: 256 TYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESA 315

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ V++  +++ L K G++DEA RL E M+  G   N  VY +L+  F + GR 
Sbjct: 316 SQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRK 375

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               ++F  +   GCK ++   +  ++   K  E+E    ++ ++ S G  PDV  Y+ L
Sbjct: 376 EDGHKVFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSIL 435

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E+   ++    
Sbjct: 436 IHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCV 495

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +  +  Y  ++DGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A  
Sbjct: 496 QPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYL 555

Query: 362 LFLDMEAK 369
           +  +M  K
Sbjct: 556 ILEEMMKK 563



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 157/286 (54%), Gaps = 6/286 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F  +R +G  P+V +Y+ LI+GL + G      N+F  M      F +    +   Y  
Sbjct: 416 IFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQG--FAL----DARAYNA 469

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++DG CK G V KA E+  +MK++ + P V TY +++ G    +  +EA  LF E   +G
Sbjct: 470 VVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKG 529

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           ++ NVV ++ +++   K G++DEA  +LE M++ G+ PN + +N+L+D       +N A 
Sbjct: 530 IELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEAL 589

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             F SM+ M C  N ++YSILING C+ ++   A   + +M  +G+ P+VV Y T+  GL
Sbjct: 590 VCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGL 649

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            ++  +  A+ LF+  + +G   D  ++   I+G+      +EA +
Sbjct: 650 AKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAMEAYQ 695



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/321 (28%), Positives = 163/321 (50%), Gaps = 6/321 (1%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F +L   GC+P++   NT ++ + + G       +FE++ +    +G +  P+  +Y+ 
Sbjct: 381 VFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRS----YGFL--PDVRSYSI 434

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GL K G   +   +F  MK +    +   YN+++ GFC +   ++A  +  EM ++ 
Sbjct: 435 LIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC 494

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           VQP V ++  I++ L K  ++DEA  L E     G+  N  +Y++L+DGF   GR++ A 
Sbjct: 495 VQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAY 554

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            +   M   G   NV++++ L++   K +EI  AL  +  M      P+   Y+ L  GL
Sbjct: 555 LILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGL 614

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
             + +  +AF  + +MQ+ G+  +   Y T I GL K G I +A  LF   +      D 
Sbjct: 615 CRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDA 674

Query: 306 RAYNCLIDGLCKSGRLKIAWE 326
            ++N LI+G+  + R   A++
Sbjct: 675 ASFNALIEGMSNANRAMEAYQ 695



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 1/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P    YT +I  L +    ++A EL  +M++      V  + +L+          +A  
Sbjct: 42  RPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALA 101

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  E+    ++P++V +NV ++   K G +D A +    +   G++P+   Y +++   C
Sbjct: 102 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLC 161

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR+  AEELF  ME+       ++Y+ +I GY      E A  L   +  +G  P VV
Sbjct: 162 KAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVV 221

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N++   L +  +V+ A  LF+ M++     ++  Y   ID LC  G + EA  +   +
Sbjct: 222 SFNSILTCLGKKRKVDEALSLFEVMKKDA-EPNSSTYNIIIDMLCLGGRVEEAYRILDEM 280

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++   N ++D LCK+ +L+ A+++F S  +     D VTY  +I  L   G++
Sbjct: 281 EHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQV 340

Query: 357 DKARDLFLDM 366
           D+A  LF  M
Sbjct: 341 DEAYRLFEKM 350



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 132/278 (47%), Gaps = 1/278 (0%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M+     P    Y  LI     A     A  L  +M + G +  V  F  ++  L + G+
Sbjct: 36  MRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQ 95

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           + +A  L++ +    + P+  +YN  +D F   G V+ A + F  +++ G K +  SY+ 
Sbjct: 96  VADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTS 155

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I   CK   +  A  L+++M ++   P    YNT+ +G     + E A+KL + ++  G
Sbjct: 156 MIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERG 215

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
                 ++ + +  L K   + EA+ LF  ++    E +   YN +ID LC  GR++ A+
Sbjct: 216 CIPSVVSFNSILTCLGKKRKVDEALSLFEVMK-KDAEPNSSTYNIIIDMLCLGGRVEEAY 274

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            +   +    L  +++T NIM+  LC   K+++A  +F
Sbjct: 275 RILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIF 312



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 109/224 (48%)

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L +  ++D+A   + +M ++  RP    Y  L+       R  RA EL   M+ +G +  
Sbjct: 20  LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           V  ++ L+    +  ++  AL+L  E+    ++PD+V+YN       +   V+ A K F 
Sbjct: 80  VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           E++  G+  D  +Y + I  LCK G + EA ELF  +   +      AYN +I G   +G
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           R + A++L   L     I  VV++N ++  L    K+D+A  LF
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLF 243



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 97/199 (48%), Gaps = 7/199 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF + +  G E NV  Y++LI+G  + G    A  + EEM            PN  
Sbjct: 517 EAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG------LTPNVY 570

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ +++D L K   +++A   F  MK+    PN  TY+ LI+G C    +N+A   + +M
Sbjct: 571 TWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDM 630

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PNVV++  +++ L K G + +A  L E     G  P+A  +N L++G     R 
Sbjct: 631 QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRA 690

Query: 182 NRAEELFV-SMESMGCKHN 199
             A +  V  + S  C  N
Sbjct: 691 MEAYQTTVYQLSSSSCSWN 709



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 74/158 (46%)

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           + + ++ A+   + M     +P    Y  L   L E  + ERA +L  +MQ  G      
Sbjct: 22  RARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVH 81

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            + T +  L + G + +A+ L   ++    E DI  YN  ID   K+G + +A + F  L
Sbjct: 82  LFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHEL 141

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               L  D V+Y  MI  LC  G++ +A +LF  MEA+
Sbjct: 142 KAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAE 179


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  188 bits (478), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 200/420 (47%), Gaps = 58/420 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A + F ++R  GC PNV TY  L++   ++     A ++F  M       G  C PN +
Sbjct: 505 QAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMV------GDACYPNAI 558

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKM---------------KD-ENINPNVVTYNSLIHGF 105
           TY+ +IDGLCK G + KA E++ K+               KD + I+PNVVTY +L++G 
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGL 618

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C A   ++A  L   M+  G +PN + ++ +++  CK G++D A  +   M + G  P+ 
Sbjct: 619 CKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSV 678

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             Y +L+D     GR++ A ++   M    C  NV +Y+ +++G CK  E E AL+L S 
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSL 738

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M  KG  P+VV Y  L  GL +  +V+   +LF +M+  G A +   YR  I+  C  G 
Sbjct: 739 MEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGL 798

Query: 286 IVEAVELFRTLRILKYELDIRAYNC---------------------------------LI 312
           + +A  L   ++   +   ++ Y                                   LI
Sbjct: 799 LDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEMESHDTAPIAPVYGMLI 858

Query: 313 DGLCKSGRLKIAWELFRSL---PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D   K+GRL+ A EL + +      + +A    +  +I ALC   ++++A  L+ +M  +
Sbjct: 859 DSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRR 918



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 156/348 (44%), Gaps = 42/348 (12%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PNV TY  L+NGLC+      A +L + M          C+PN + Y  ++DG CK G 
Sbjct: 605 SPNVVTYGALVNGLCKAQKVSDAHDLLDAM------LAAGCEPNQIVYDALVDGFCKVGE 658

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A+E+FL+M      P+V TY SLI         + A  +  +M+     PNVV++  
Sbjct: 659 IDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTA 718

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ LCK G+ ++A  LL LM + G  PN   Y  L+DG    G+V+   ELF+ M++ G
Sbjct: 719 MVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKG 778

Query: 196 CKHNVFSYSILINGYCK---------------------------------NKEIEGALSL 222
           C  N  +Y ILIN  C                                  +K    +L L
Sbjct: 779 CAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGL 838

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA---ADTWAYRTFIDG 279
             EM S    P   +Y  L     +  ++E A +L  EM     +   A    + + I  
Sbjct: 839 LEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQA 898

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
           LC +  + EAV L+  +R      D+ A+ CL+ GL +  +   A +L
Sbjct: 899 LCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 176/413 (42%), Gaps = 63/413 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC-- 71
           GC P+   +N+L++  C       A  LF  M N  G     C P  V Y   I  +C  
Sbjct: 336 GCNPSPSLFNSLVHTYCNAEDYAYAYKLFNRM-NTCG-----CPPGYVVYNIFIGSICGR 389

Query: 72  ----KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D A++++ +M   +   N +   +     C    + +A  +  EMM +G  
Sbjct: 390 EELPNPELLDLAEKVYEEMLVASCVLNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFV 449

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+  ++  ++  LC+  ++D+A  L + M ++GV P+ + Y  L+D FC  G + +A+  
Sbjct: 450 PDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSW 509

Query: 188 FVSMESMGCKHNV-----------------------------------FSYSILINGYCK 212
           F  M S GC  NV                                    +YS LI+G CK
Sbjct: 510 FDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFHRMVGDACYPNAITYSALIDGLCK 569

Query: 213 NKEIEGALSLYSEML----------------SKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             EI+ A  +Y++++                +  I P+VV Y  L  GL +  +V  A  
Sbjct: 570 AGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHD 629

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D M   G   +   Y   +DG CK G I  A E+F  +    Y   +  Y  LID + 
Sbjct: 630 LLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMF 689

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K GRL +A ++   + +     +VVTY  M+  LC  G+ +KA +L   ME K
Sbjct: 690 KDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKK 742



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 163/366 (44%), Gaps = 57/366 (15%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN VTY T++ G  K+  +   K +   M  E  NP+   +NSL+H +C A D+  A  L
Sbjct: 304 PNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKL 363

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKN---------------------------------- 143
           F  M   G  P  V +N+ +  +C                                    
Sbjct: 364 FNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTANF 423

Query: 144 -------GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
                  GK ++A ++++ M++ G  P+A  Y  ++   C   RV++A  LF  M+ +G 
Sbjct: 424 ARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGV 483

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             +V++Y+ILI+ +CK   IE A S + EM S G  P+VV Y  L     +  Q+ +A  
Sbjct: 484 NPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAND 543

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD------------ 304
           +F  M       +   Y   IDGLCK G I +A E++  L      ++            
Sbjct: 544 IFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDT 603

Query: 305 ----IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
               +  Y  L++GLCK+ ++  A +L  ++       + + Y+ ++   C  G++D A+
Sbjct: 604 ISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQ 663

Query: 361 DLFLDM 366
           ++FL M
Sbjct: 664 EVFLRM 669



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 168/403 (41%), Gaps = 50/403 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA     +L+ FG  P+  TYN L+  L   G   +A  + +EM+         C   + 
Sbjct: 187 EALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASG-----FCMDRS- 240

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T  +    LCKEG    A +L   ++ E+   + V    +I G   A+ +NEA      M
Sbjct: 241 TVGSFAQALCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRM 297

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PNVV++  ++    K  ++    R++ +M+  G  P+  ++N+L+  +C     
Sbjct: 298 RCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDY 357

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI------------------------- 216
             A +LF  M + GC      Y+I I   C  +E+                         
Sbjct: 358 AYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNK 417

Query: 217 ----------------EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
                           E A  +  EM+ KG  PD   Y  +   L +  +V++AF LF E
Sbjct: 418 INTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQE 477

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M++ GV  D + Y   ID  CK G I +A   F  +R      ++  Y  L+    KS +
Sbjct: 478 MKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQ 537

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L  A ++F  +       + +TY+ +I  LC  G++ KA +++
Sbjct: 538 LYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVY 580



 Score =  138 bits (348), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 131/268 (48%), Gaps = 14/268 (5%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PNV TY  +++GLC+TG T  ALNL   M          C PN VTYT +IDGL K G
Sbjct: 709 CNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKG------CSPNVVTYTALIDGLGKAG 762

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            VD   ELF++MK +   PN VTY  LI+  C A   ++A  L  EM        +  + 
Sbjct: 763 KVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYR 822

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
             +    K  +   +  LLE M      P A VY  L+D F   GR+  A EL   M  +
Sbjct: 823 TTVQGFSK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEV 880

Query: 195 GCKHNVFS---YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
               N+ S   ++ LI   C + ++E A++LYSEM  +GI PD+  +  L  GL E ++ 
Sbjct: 881 SSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKW 940

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             A +L   + + GV    W    F DG
Sbjct: 941 NEALQLCYGICQEGV---NWEGNKFCDG 965



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 147/294 (50%), Gaps = 11/294 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+++   G  P+V TY +LI+ + + G   +A+ +  +M   +      C PN V
Sbjct: 661 SAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS------CNPNVV 714

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGLCK G  +KA  L   M+ +  +PNVVTY +LI G   A   +    LF++M
Sbjct: 715 TYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQM 774

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  PN V++ +++N  C  G +D+A  LL+ M Q         Y T + GF  + R 
Sbjct: 775 KTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRF 832

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV---IY 238
             +  L   MES         Y +LI+ + K   +E AL L+ EM+      ++    ++
Sbjct: 833 LASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMH 892

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            +L   L    QVE A  L+ EM+R G+  D  A+   + GL +     EA++L
Sbjct: 893 TSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 192/351 (54%), Gaps = 7/351 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV TYN +INGLC+ G    +L ++E M          C+ +  TY+++I GLC  G V
Sbjct: 253 PNVVTYNVMINGLCKMGRFDESLEMWERMKKNE------CEMDLFTYSSLICGLCDVGNV 306

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A E++ +M   ++  +VVTYN+L++GFC A    E+  L++ M  +    NVVS+N+ 
Sbjct: 307 DGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIF 365

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  L +N K++EA  + EL+ + G   ++  Y  L+ G C  G +N+A ++    +  G 
Sbjct: 366 IRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD 425

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           K + F+YS +++G  K   ++ AL +  +M   G +    + N L  G     ++E A  
Sbjct: 426 KLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAIC 485

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
            F EM+  G +    +Y T I+GLCK     +A    + +    ++ D+  Y+ L+DGLC
Sbjct: 486 FFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLC 545

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  ++ +A  L+R +    L  DV  +NI++H LC+ GK++ A  L+ +M+
Sbjct: 546 QGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMK 596



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/370 (30%), Positives = 195/370 (52%), Gaps = 8/370 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L   +     +P+V++Y T+ING+ ++G  + AL +F+EM     E G+V  P+ 
Sbjct: 166 VEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMF----ERGLV--PDV 219

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           + Y  +IDG  K G   + KE++ ++ K   + PNVVTYN +I+G C    ++E+  ++ 
Sbjct: 220 MCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWE 279

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M     + ++ +++ ++  LC  G +D A  + + M++  V  +   YN L++GFC  G
Sbjct: 280 RMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAG 339

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++  + EL+V M    C HNV SY+I I G  +N+++E A+S++  +  +G   D   Y 
Sbjct: 340 KIKESFELWVMMGKENC-HNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYG 398

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GL +   + +A K+  E +  G   D +AY + +DGL K G + EA+ +   +   
Sbjct: 399 VLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKY 458

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             EL     N LI+G  ++ +L+ A   FR +        VV+YN +I+ LC   +   A
Sbjct: 459 GCELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDA 518

Query: 360 RDLFLDMEAK 369
                +M  K
Sbjct: 519 YSFVKEMLEK 528



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 211/400 (52%), Gaps = 34/400 (8%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLING-----LCRTGHTIVA-------------LNLF 42
           EA   F K+  +FGC+P + +YN L+N      L     + +A              N+ 
Sbjct: 96  EALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNIL 155

Query: 43  EEMANGNGEF----GVV-------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
            +++    +F    G++        KP+  +Y T+I+G+ K G +  A E+F +M +  +
Sbjct: 156 IKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGL 215

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEAS 150
            P+V+ YN +I GF    D+ + K ++  ++    V PNVV++NV++N LCK G+ DE+ 
Sbjct: 216 VPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESL 275

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            + E M +     + F Y++L+ G C  G V+ A E++  M       +V +Y+ L+NG+
Sbjct: 276 EMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGF 335

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C+  +I+ +  L+  M+ K    +VV YN    GLFE  +VE A  +++ ++R G  AD+
Sbjct: 336 CRAGKIKESFELWV-MMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADS 394

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I GLCKNG++ +A+++ +  +    +LD  AY+ ++DGL K GR+  A  +   
Sbjct: 395 TTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQ 454

Query: 331 LPR-GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           + + G  ++  V  N +I+      K+++A   F +ME K
Sbjct: 455 MDKYGCELSPHVC-NPLINGFVRASKLEEAICFFREMETK 493



 Score =  147 bits (372), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/318 (26%), Positives = 160/318 (50%), Gaps = 41/318 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +++  LR  G   +  TY  LI+GLC+ GH   AL + +E  +G        K +  
Sbjct: 377 EAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGD------KLDAF 430

Query: 62  TYTTIIDGLCKEGFVDKAKEL-----------------------------------FLKM 86
            Y++I+DGL K+G VD+A  +                                   F +M
Sbjct: 431 AYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREM 490

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           + +  +P VV+YN+LI+G C A  +++A     EM+++  +P++++++++M+ LC+  K+
Sbjct: 491 ETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKI 550

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A  L   ++  G+ P+  ++N LM G C  G++  A  L+ +M+   C  N+ +++ L
Sbjct: 551 DMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTL 610

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G  K +E E A  +++ M   G +PD++ YN    GL    ++     LFD+  ++G+
Sbjct: 611 MDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGI 670

Query: 267 AADTWAYRTFIDGLCKNG 284
              +  +   +  + K G
Sbjct: 671 LPTSITWYILVRAVLKLG 688



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 118/236 (50%), Gaps = 6/236 (2%)

Query: 135 VIMNELCKNGKMDEASRLLELMIQI-GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++    K+   +EA    + M +I G +P    YN L++ F     + +AE      E+
Sbjct: 83  TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFET 142

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G   N+ +Y+ILI    K ++   A  L   M SK +KPDV  Y T+  G+ +   +  
Sbjct: 143 VGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVS 202

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL---DIRAYNC 310
           A ++FDEM   G+  D   Y   IDG  K G  V+  E++   R++K      ++  YN 
Sbjct: 203 ALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWE--RLVKGSCVYPNVVTYNV 260

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +I+GLCK GR   + E++  + +     D+ TY+ +I  LC  G +D A +++ +M
Sbjct: 261 MINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM 316



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 6/148 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L+ ++ V G EP+V  +N L++GLC  G    AL L+  M   N      C PN VT
Sbjct: 553 ALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSN------CLPNLVT 606

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T++DGL K    + A  ++  M      P++++YN  + G C     ++   LF + +
Sbjct: 607 HNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDAL 666

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             G+ P  +++ +++  + K G +D  S
Sbjct: 667 KNGILPTSITWYILVRAVLKLGPLDSLS 694


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 193/380 (50%), Gaps = 16/380 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK----- 57
           A  LF  + + GC+PNV TY  LI+G C+ G    A  ++  M  G+ E   + K     
Sbjct: 549 ADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM-RGDIESSDMDKYFKLD 607

Query: 58  ------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
                 PN +TY  ++DGLCK   V +A EL   M      PN + Y+++I GFC     
Sbjct: 608 HNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKL 667

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            +A+ +F +M ++G  PN+ +++  ++ L K+ ++D   ++L  M++    PN  +Y  +
Sbjct: 668 QDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEM 727

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G+ + A +L + ME  GC  NV +Y+ +I+G+ K+ +IE  L L+ +M SKG 
Sbjct: 728 VDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGC 787

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+ + Y  L         ++ A+KL DEM++        ++R  I+G  +    + ++ 
Sbjct: 788 APNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQE--FITSIG 845

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV--LIADVVTYNIMIHA 349
           L   L   +       Y  LID   K+GRL++A +L   +       +++   Y  +I  
Sbjct: 846 LLDELSENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIEN 905

Query: 350 LCADGKMDKARDLFLDMEAK 369
           L    K+DKA +L+  M +K
Sbjct: 906 LSHASKVDKALELYASMISK 925



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 185/368 (50%), Gaps = 22/368 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +LF +++  G  P+V+TY  LI+  C+ G    A   F+EM +        C PN V
Sbjct: 478 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKG------CTPNVV 531

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +I    K   +  A ELF  M  E   PNVVTY +LI G C A    +A  ++  M
Sbjct: 532 TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591

Query: 122 --------MDQGVQ--------PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
                   MD+  +        PNV+++  +++ LCK  ++ EA  LL+ M+  G  PN 
Sbjct: 592 RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQ 651

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
            VY+ ++DGFC  G++  A+E+F  M   G   N+++YS  I+   K+  ++  L + S+
Sbjct: 652 IVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSK 711

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           ML     P+VVIY  +  GL +I + + A+KL  +M+  G   +   Y   IDG  K+G 
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           I + +ELFR +       +   Y  LI+  C +G L  A++L   + +      ++++  
Sbjct: 772 IEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRK 831

Query: 346 MIHALCAD 353
           +I     +
Sbjct: 832 IIEGFSQE 839



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 184/413 (44%), Gaps = 63/413 (15%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK- 72
           GC PN   +N+LI+  C++     A  LF++M          C+P  + Y   I  +C  
Sbjct: 344 GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCG------CQPGYLVYNIFIGSVCSN 397

Query: 73  -----EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
                   +D  ++ + +M D  +  N V  ++     C A  +++A  +  EMM +G  
Sbjct: 398 EEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFV 457

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR---- 183
           P+  +++ ++  LC   K+++A  L E M + G+ P+ + Y  L+D FC  G + +    
Sbjct: 458 PDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKW 517

Query: 184 -------------------------------AEELFVSMESMGCKHNVFSYSILINGYCK 212
                                          A+ELF  M   GCK NV +Y+ LI+G+CK
Sbjct: 518 FDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCK 577

Query: 213 NKEIEGALSLYSEM--------LSKGIK--------PDVVIYNTLFIGLFEIHQVERAFK 256
             +IE A  +Y+ M        + K  K        P+V+ Y  L  GL + ++V+ A +
Sbjct: 578 AGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHE 637

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D M  HG   +   Y   IDG CK G + +A E+F  +    Y  ++  Y+  ID L 
Sbjct: 638 LLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLF 697

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K  RL +  ++   +       +VV Y  M+  LC  GK D+A  L L ME K
Sbjct: 698 KDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEK 750



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 177/390 (45%), Gaps = 28/390 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++R   C PNV TY  L++G  R G       +   M          C PN  
Sbjct: 297 EAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEG------CYPNRE 350

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL---- 117
            + ++I   CK      A +LF KM      P  + YN  I   C   +   +  L    
Sbjct: 351 IFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVE 410

Query: 118 --FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
             + EM+D GV  N V+ +     LC  GK D+A +++  M+  G  P+   Y+ ++   
Sbjct: 411 KAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFL 470

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           C   +V +A  LF  M+  G   +V++Y+ILI+ +CK   I+ A   + EML KG  P+V
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNV 530

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
           V Y  L     +  Q+  A +LF+ M   G   +   Y   IDG CK G I +A +++  
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590

Query: 296 LR--ILKYELD--------------IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
           +R  I   ++D              +  Y  L+DGLCK+ R+K A EL  ++       +
Sbjct: 591 MRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPN 650

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + Y+ +I   C  GK+  A+++F  M  +
Sbjct: 651 QIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 178/406 (43%), Gaps = 59/406 (14%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT---YTT 65
           +L+ FG +P+  TYN LI    R      A  +  EM +    +  V    T++   Y+ 
Sbjct: 201 RLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS----YAFVMDRYTLSCFAYSL 256

Query: 66  IIDGLCKEGF--VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
              G C+E F  +D+A         E+  P+ V YN ++ G C A+ + EA  +   M  
Sbjct: 257 CKGGKCREAFDLIDEA---------EDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRS 307

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
               PNVV++ ++++   + G++    R+L +MI  G  PN  ++N+L+  +C +   + 
Sbjct: 308 SSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSY 367

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKE---------------------------- 215
           A +LF  M   GC+     Y+I I   C N+E                            
Sbjct: 368 AYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVN 427

Query: 216 -------------IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
                         + A  +  EM+ KG  PD   Y+ +   L +  +VE+AF LF+EM+
Sbjct: 428 VSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMK 487

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           R+G+    + Y   ID  CK G I +A + F  +       ++  Y  LI    K+ ++ 
Sbjct: 488 RNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMP 547

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           +A ELF  +       +VVTY  +I   C  G+++KA  ++  M  
Sbjct: 548 VADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRG 593



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 147/324 (45%), Gaps = 64/324 (19%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA  L   +   GCEPN   Y+ +I+G C+ G    A  +F +M+               
Sbjct: 634 EAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFI 693

Query: 48  ----GNGEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                +    +V           C PN V YT ++DGLCK G  D+A +L LKM+++  N
Sbjct: 694 DCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCN 753

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTY ++I GF  +    +   LF +M  +G  PN +++ V++N  C NG +DEA +L
Sbjct: 754 PNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKL 813

Query: 153 LELMIQ------------------------IGVR---------PNAFVYNTLMDGFCLTG 179
           L+ M Q                        IG+          P   +Y  L+D +   G
Sbjct: 814 LDEMKQTYWPKHILSHRKIIEGFSQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAG 873

Query: 180 RVNRAEELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           R+  A +L   +S        N + Y+ LI       +++ AL LY+ M+SK + P++ I
Sbjct: 874 RLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSI 933

Query: 238 YNTLFIGLFEIHQVERAFKLFDEM 261
              L  GL ++ + + A +L D +
Sbjct: 934 LVHLIKGLIKVDKWQEALQLSDSI 957



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 8/308 (2%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           ++   C+ G+ + A E   ++KD    P+  TYN+LI  F  A+  + A  +  EM+   
Sbjct: 182 LVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYA 241

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
              +  + +     LCK GK  EA  L++        P+   YN ++ G C       A 
Sbjct: 242 FVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDF--VPDTVFYNRMVSGLCEASLFEEAM 299

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++   M S  C  NV +Y IL++G  +  ++     + S M+++G  P+  I+N+L    
Sbjct: 300 DILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAY 359

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN-----GYIVEAVE-LFRTLRIL 299
            +      A+KLF +M + G       Y  FI  +C N       I++ VE  +  +  L
Sbjct: 360 CKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDL 419

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              L+    +     LC +G+   A+++   +     + D  TY+ +I  LC   K++KA
Sbjct: 420 GVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKA 479

Query: 360 RDLFLDME 367
             LF +M+
Sbjct: 480 FSLFEEMK 487


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 181/368 (49%), Gaps = 5/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +   +  +G EP++ TYN L  GLC+ G    A  L +EM     E      P+ V
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM-----ERLSTALPDVV 350

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D   K      A  L  +M+D+ + P +VT+N ++   C      EA     ++
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKI 410

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V+++N +++  CK G + +A  L++ M+  G++ + F  NT++   C   R 
Sbjct: 411 AEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRY 470

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AEEL  S    G   +  SY  ++  Y K    E AL L+ +M+ + + P +  YNTL
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A    +E+   G+  D   Y   I   CK G +  A      +    +
Sbjct: 531 IKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+   N L++GLC  G+L  A +LF S        DV+TYN +I ++C  G +D A  
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALH 650

Query: 362 LFLDMEAK 369
            F DME K
Sbjct: 651 FFDDMEVK 658



 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 179/398 (44%), Gaps = 42/398 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A    ++ FG  P+  TYNTL+N  CR G    A  L   M       G+   P   
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRD----GIA--PTQP 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA------- 114
           TY T++    + G++ +A ++   M      P++ TYN L  G C A   +EA       
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEM 339

Query: 115 -----------------------KC------LFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                                  +C      L  EM D+GV+P +V+ N+++  LCK GK
Sbjct: 340 ERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           ++EA   LE + + G+ P+   YNTL+D +C  G V +A  L   M   G K + F+ + 
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++   CK K  E A  L      +G  PD V Y T+    F+ +  E A +L+D+M    
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +      Y T I GLC+   + EA++    L       D   YN +I   CK G L+ A+
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
                +       DVVT N +++ LC  GK+DKA  LF
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 184/391 (47%), Gaps = 44/391 (11%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F  L      PN +T+N L++  C  G    AL     M      FG+   P+ VTY T
Sbjct: 195 VFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQG----FGL--SPDAVTYNT 248

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++  C++G + +A+ L  +MK + I P   TYN+L+  F       +A  +   M   G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR-PNAFVYNTLMDGFCLTGRVNR- 183
            +P++ ++NV+   LC+ GK+DEA RL + M ++    P+   YNTL+D  C   R +  
Sbjct: 309 FEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDA-CFKWRCSSD 367

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L   M   G K  + +++I++   CK  ++E AL    ++  +G+ PDV+ YNTL  
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT-------- 295
              +   V +AF L DEM   G+  DT+   T +  LCK     +A EL  +        
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 296 ---------------------LRILKYELD------IRAYNCLIDGLCKSGRLKIAWELF 328
                                LR+    ++      I  YN LI GLC+  RLK A +  
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             L    L+ D  TYNI+IHA C +G ++ A
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENA 578



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 196/440 (44%), Gaps = 91/440 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  +++  G  P   TYNTL++   R G    A  + E M      +G   +P+  
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT----AYGF--EPDLR 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE-----NINPNVVTYNSLIHGFCYANDW---NE 113
           TY  +  GLC+ G VD+A     ++KDE        P+VVTYN+L+   C+   W   ++
Sbjct: 315 TYNVLAVGLCQAGKVDEA----FRLKDEMERLSTALPDVVTYNTLVDA-CF--KWRCSSD 367

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A  L  EM D+GV+P +V+ N+++  LCK GK++EA   LE + + G+ P+   YNTL+D
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 174 GFCLTGRVNRA-----------------------------------EELFVSMESMGCKH 198
            +C  G V +A                                   EEL  S    G   
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +  SY  ++  Y K    E AL L+ +M+ + + P +  YNTL  GL  + +++ A    
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 259 DEMQRHGVAADTWAYR-----------------------------------TFIDGLCKN 283
           +E+   G+  D   Y                                    T ++GLC +
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G + +A++LF +      ++D+  YN LI  +CK G +  A   F  +    L  D  TY
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667

Query: 344 NIMIHALCADGKMDKARDLF 363
           N+++ AL   G+ ++A ++ 
Sbjct: 668 NVVLSALSEAGRSEEAHNML 687



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 164/330 (49%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  G +P + T+N ++  LC+ G    AL   E++A    E G+   P+ +
Sbjct: 367 DALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIA----EEGLA--PDVI 420

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID  CK G V KA  L  +M  + +  +  T N++++  C    + +A+ L    
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ VS+  +M    K    + A RL + MI+  + P+   YNTL+ G C   R+
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +    +   G   +  +Y+I+I+ YCK  ++E A   +++M+    KPDVV  NTL
Sbjct: 541 KEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++++A KLF+     G   D   Y T I  +CK G +  A+  F  + +   
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           + D   YN ++  L ++GR + A  +   L
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 174/379 (45%), Gaps = 30/379 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV------- 54
           EA     K+   G  P+V TYNTLI+  C+ G+   A  L +EM     +          
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461

Query: 55  --VCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
             +CK                    P+ V+Y T++    KE   + A  L+ +M +  + 
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++ TYN+LI G C      EA     E++++G+ P+  ++N+I++  CK G ++ A R 
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M++   +P+    NTLM+G CL G++++A +LF S    G K +V +Y+ LI   CK
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL  + +M  KG++PD   YN +   L E  + E A  +  ++   G  + ++A
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELD-IRAYNCLIDGLCKSGRLKIAWELFRSL 331
                        + E           K + + +  Y   ++GLC  G+LK A  +   +
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761

Query: 332 PRGVLIADVVTYNIMIHAL 350
            +  +  D  TY  ++  L
Sbjct: 762 MQKGMPVDSSTYITLMEGL 780



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 148/311 (47%), Gaps = 5/311 (1%)

Query: 57  KPNTVTYTTIIDGLCKEG--FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           +P+      ++  L +        + ++F  + +  ++PN  T+N L+H  C      +A
Sbjct: 168 RPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADA 227

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
                 M   G+ P+ V++N ++N  C+ G + EA  LL  M + G+ P    YNTL+  
Sbjct: 228 LATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSA 287

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM--LSKGIK 232
           F   G + +A ++  SM + G + ++ +Y++L  G C+  +++ A  L  EM  LS  + 
Sbjct: 288 FARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL- 346

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PDVV YNTL    F+      A +L +EM+  GV      +   +  LCK G + EA+  
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
              +       D+  YN LID  CK+G +  A+ L   +    L  D  T N +++ LC 
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCK 466

Query: 353 DGKMDKARDLF 363
             + + A +L 
Sbjct: 467 MKRYEDAEELL 477



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 135/282 (47%), Gaps = 3/282 (1%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCL--FIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + P++   N+++     +        L  F  +++  + PN  +FN++++  C  G + +
Sbjct: 167 VRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLAD 226

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
           A   L  M   G+ P+A  YNTL++  C  G +  A  L   M+  G      +Y+ L++
Sbjct: 227 ALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVS 286

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVA- 267
            + +   I+ A  +   M + G +PD+  YN L +GL +  +V+ AF+L DEM+R   A 
Sbjct: 287 AFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL 346

Query: 268 ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
            D   Y T +D   K     +A+ L   +R    +  +  +N ++  LCK G+L+ A   
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGK 406

Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              +    L  DV+TYN +I A C  G + KA  L  +M  K
Sbjct: 407 LEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 130/269 (48%), Gaps = 11/269 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ TYNTLI GLCR      A++   E+     E G+V  P+  TY  II   CKEG +
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNELV----EKGLV--PDETTYNIIIHAYCKEGDL 575

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A     KM + +  P+VVT N+L++G C     ++A  LF   +++G + +V+++N +
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  +CK G +D A    + M   G++P+AF YN ++      GR   A  +   +   G 
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695

Query: 197 KHNVFSYSILINGYCKN---KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
               F+  +L          KE EG     +E   K     +  Y     GL    Q++ 
Sbjct: 696 LSQSFACPLLKPSSADEADVKEHEGKPE--AESSEKAQDNALETYMERLNGLCTGGQLKE 753

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           A  + DEM + G+  D+  Y T ++GL K
Sbjct: 754 AKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVC---KPNTVT 62
           F  + V G +P+ FTYN +++ L   G +  A N+  ++A+ G       C   KP++  
Sbjct: 652 FDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSAD 711

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              +     KE       E   K +D  +     TY   ++G C      EAK +  EMM
Sbjct: 712 EADV-----KEHEGKPEAESSEKAQDNALE----TYMERLNGLCTGGQLKEAKAVLDEMM 762

Query: 123 DQGVQPNVVSFNVIMNELCKNGK 145
            +G+  +  ++  +M  L K  K
Sbjct: 763 QKGMPVDSSTYITLMEGLIKRQK 785


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/350 (32%), Positives = 189/350 (54%), Gaps = 9/350 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A A+F      G    V+ ++ LI+   R+G+   A+ +F+ M + NG       PN VT
Sbjct: 209 AKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS-NG-----LMPNLVT 262

Query: 63  YTTIIDGLCKEGFVD--KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           Y  +ID  C +G V+  K  E+F  M    + P+ +T+NSL+        W  A+ LF  
Sbjct: 263 YNAVIDA-CGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSA 321

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G+  ++ ++N +++ +CK G+MD A  ++  M    + PN   Y+T++DG+   GR
Sbjct: 322 MVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGR 381

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A  +F  M+ +G   +  SY+ L++ Y K    E AL +  EM + GI+ DVV YN 
Sbjct: 382 LDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNA 441

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  + ++ +   ++F+EM+R  V+ +   Y T ID   K G   EA+E+FR  +   
Sbjct: 442 LLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAG 501

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            + D+  Y+ LID LCK+G ++ +  L   + +  +  +VVTYN +I A 
Sbjct: 502 LKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAF 551



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 176/346 (50%), Gaps = 9/346 (2%)

Query: 23  NTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           + +I+ L R G   +A  +F+  +  G G+           ++ +I    + G+ ++A +
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGK-------TVYAFSALISAYGRSGYCNEAIK 246

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           +F  MK   + PN+VTYN++I        ++ +   +F  M+  GVQP+ ++FN ++   
Sbjct: 247 VFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVC 306

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            + G  + A RL   M+  G+  + F YNTL+D  C  G+++ A E+   M +     NV
Sbjct: 307 SRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNV 366

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +YS +I+GY K   ++ AL++++EM   G+  D V YNTL     ++ + E+A  +  E
Sbjct: 367 VTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKE 426

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G+  D   Y   + G  K     E   +F  ++  +   ++  Y+ LID   K G 
Sbjct: 427 MENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGL 486

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            K A E+FR   +  L ADVV Y+ +I ALC +G ++ +  L  +M
Sbjct: 487 YKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEM 532



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 172/353 (48%), Gaps = 13/353 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFE---EMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           C P+ +T+  L+  L   G +  A+  FE      +G  E G +        + +I  L 
Sbjct: 151 CGPDDYTF--LLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLA-------SAMISTLG 201

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           + G V+ AK +F     E     V  +++LI  +  +   NEA  +F  M   G+ PN+V
Sbjct: 202 RLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLV 261

Query: 132 SFNVIMNELCKNG-KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           ++N +++   K G +  +   + + M+  GV+P+   +N+L+      G    A  LF +
Sbjct: 262 TYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSA 321

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
           M   G   ++F+Y+ L++  CK  +++ A  + SEM +K I P+VV Y+T+  G  ++ +
Sbjct: 322 MVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGR 381

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
           ++ A  +F+EM+  GV  D  +Y T +    K G   +A+++ + +       D+  YN 
Sbjct: 382 LDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNA 441

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           L+ G  K  R      +F  + RG +  +++TY+ +I      G   +A ++F
Sbjct: 442 LLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVF 494



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/369 (25%), Positives = 164/369 (44%), Gaps = 68/369 (18%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEM---------ANGNGEFGV------------V 55
           PNV TY+T+I+G  + G    ALN+F EM          + N    V            V
Sbjct: 364 PNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDV 423

Query: 56  CK--------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
           CK         + VTY  ++ G  K+   D+ + +F +MK   ++PN++TY++LI  +  
Sbjct: 424 CKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSK 483

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
              + EA  +F E    G++ +VV ++ +++ LCKNG ++ +  LL+ M + G+RPN   
Sbjct: 484 GGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEMTKEGIRPNVVT 543

Query: 168 YNTLMDGF-------CLTGRVNRAEELFV-SMESMGCKHNVFSYS--------------I 205
           YN+++D F       C+         L V S+ S+  +  + S +              +
Sbjct: 544 YNSIIDAFGRSASAQCVVDDSGETTALQVESLSSIVVQEAIESQAADKEDNRIIEIFGKL 603

Query: 206 LINGYCKNK-----EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
                C+ K     EI   L ++ +M    IKP+VV ++ +          E A  L +E
Sbjct: 604 AAEKACEAKNSGKQEILCILGVFQKMHELKIKPNVVTFSAILNACSRCDSFEDASMLLEE 663

Query: 261 M-----QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           +     Q +GVA         + G  +N ++ +A  LF  ++++        YN L D L
Sbjct: 664 LRLFDNQVYGVA------HGLLMGYRENVWL-QAQSLFDEVKLMDSSTASAFYNALTDML 716

Query: 316 CKSGRLKIA 324
              G+ + A
Sbjct: 717 WHFGQKRGA 725



 Score = 56.2 bits (134), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 1/167 (0%)

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S +I+   +  ++E A +++   L +G    V  ++ L            A K+FD M+ 
Sbjct: 194 SAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKS 253

Query: 264 HGVAADTWAYRTFIDGLCKNGY-IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           +G+  +   Y   ID   K G    + VE+F  +     + D   +N L+    + G  +
Sbjct: 254 NGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWE 313

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  LF ++    +  D+ TYN ++ A+C  G+MD A ++  +M  K
Sbjct: 314 AARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTK 360


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 99/314 (31%), Positives = 171/314 (54%), Gaps = 6/314 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A+F  ++ +G  P+V +Y+ LI+GL + G      ++F  M      F +    +   Y 
Sbjct: 552 AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQG--FAL----DARAYN 605

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            ++DG CK G +DKA E+  +MK + + P V TY S+I G    +  +EA  LF E   +
Sbjct: 606 AVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK 665

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NV+ ++ +++   K G++DEA  +LE M++ G+ PN + +N+LMD       +N A
Sbjct: 666 GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEA 725

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F SM+ M C  N ++YSILING C+ ++   A   + EM  +G+ P+VV Y T+  G
Sbjct: 726 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAG 785

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++  +  A  LF+  + +G   D  ++   I+G+      +EA  +F   R+    ++
Sbjct: 786 LAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEETRLKGCRIN 845

Query: 305 IRAYNCLIDGLCKS 318
           ++A   L+D L K+
Sbjct: 846 VKACISLLDALNKA 859



 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 186/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF ++      P  + YNT+I G    G    A  L +++     E G  C P+ V
Sbjct: 305 EAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLK----ERG--CIPSVV 358

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++ +I+  L K+  VD+A  LF  MK ++  PN  TYN +I   C A    EA  +  EM
Sbjct: 359 SFNSILTCLGKKRKVDEALTLFEAMK-KDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEM 417

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G+ PN+++ N++++ LCK  K + A  + E   Q G  PN+  Y +L+DG    G V
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  LF +M   G   N   Y+ LI  +  +   E    ++ EM  +G +PD+ + NT 
Sbjct: 478 DDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTY 537

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              +F+   VE+   +F++++ +G   D  +Y   I GL K G   E   +F  ++   +
Sbjct: 538 MDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGF 597

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            LD RAYN ++DG CKSG+L  A+E+   +    +   V TY  +I  L    ++D+A  
Sbjct: 598 ALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYM 657

Query: 362 LFLDMEAK 369
           LF + ++K
Sbjct: 658 LFEEAKSK 665



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 198/398 (49%), Gaps = 50/398 (12%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A LF         PN+ T N +++ LC+      A  +FE  A+  G     C PN+
Sbjct: 417 MEHAGLF---------PNLLTVNIMVDRLCKAKKFEPAYEMFE-TASQRG-----CNPNS 461

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF--------------- 105
           VTY ++IDGL K+G VD A  LF  M D   N N V Y SLI  F               
Sbjct: 462 VTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKE 521

Query: 106 -----CY---------------ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                C                A D  + + +F ++   G  P+V S++++++ L K G+
Sbjct: 522 MNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQ 581

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
             E S +   M Q G   +A  YN ++DGFC +G++++A E+   M+       V +Y  
Sbjct: 582 ARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGS 641

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +I+G  K   ++ A  L+ E  SKGI+ +V++Y++L  G  ++ +++ A+ + +EM + G
Sbjct: 642 IIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG 701

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  + + + + +D L K   I EA+  F++++ +K   +   Y+ LI+GLC+  +   A+
Sbjct: 702 LTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 761

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             ++ + +  L+ +VVTY  MI  L   G +  A  LF
Sbjct: 762 VFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLF 799



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/367 (28%), Positives = 182/367 (49%), Gaps = 7/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  +L+  GC P+V ++N+++  L +      AL LFE M           +PN+ T
Sbjct: 341 AYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKD-------AEPNSST 393

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  IID LC  G V++A  +  +M+   + PN++T N ++   C A  +  A  +F    
Sbjct: 394 YNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETAS 453

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G  PN V++  +++ L K G +D+A RL E M+  G   N  VY +L+  F + GR  
Sbjct: 454 QRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKE 513

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
              ++F  M   GC+ ++   +  ++   K  ++E   +++ ++   G  PDV  Y+ L 
Sbjct: 514 DGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILI 573

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E+   +++ +  
Sbjct: 574 HGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVP 633

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  Y  +IDGL K  RL  A+ LF       +  +V+ Y+ +I      G++D+A  +
Sbjct: 634 PTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLI 693

Query: 363 FLDMEAK 369
             +M  K
Sbjct: 694 LEEMMKK 700



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 188/437 (43%), Gaps = 77/437 (17%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  +++  G E  V  + TL+  L R G    AL L +E+       G   +P+ V 
Sbjct: 201 ALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVK------GSCLEPDIVL 254

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM- 121
           Y   ID   K G VD A + F ++K + + P+ V+Y S+I   C A   +EA+ LF +M 
Sbjct: 255 YNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQME 314

Query: 122 ------------------------------MDQ----GVQPNVVSFNVIMNELCKNGKMD 147
                                         +DQ    G  P+VVSFN I+  L K  K+D
Sbjct: 315 TERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVD 374

Query: 148 EASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR------------------------ 183
           EA  L E M +    PN+  YN ++D  C+ G+V                          
Sbjct: 375 EALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMV 433

Query: 184 -----------AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
                      A E+F +    GC  N  +Y  LI+G  K   ++ A  L+  ML  G  
Sbjct: 434 DRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHN 493

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
            + V+Y +L    F   + E   K+F EM R G   D     T++D + K G + +   +
Sbjct: 494 ANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAI 553

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F  ++   +  D+R+Y+ LI GL K+G+ +    +F ++ +     D   YN ++   C 
Sbjct: 554 FEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCK 613

Query: 353 DGKMDKARDLFLDMEAK 369
            GK+DKA ++  +M+ K
Sbjct: 614 SGKLDKAYEVLEEMKVK 630



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 142/281 (50%), Gaps = 6/281 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E +++F  ++  G   +   YN +++G C++G    A  + EEM            P   
Sbjct: 584 ETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKR------VPPTVA 637

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +IIDGL K   +D+A  LF + K + I  NV+ Y+SLI GF      +EA  +  EM
Sbjct: 638 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 697

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV ++N +M+ L K  +++EA    + M ++   PN + Y+ L++G C   + 
Sbjct: 698 MKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 757

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A   +  M+  G   NV +Y+ +I G  K   I  A SL+    + G  PD   +N L
Sbjct: 758 NKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNAL 817

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
             G+   ++   A+ +F+E +  G   +  A  + +D L K
Sbjct: 818 IEGMSHANRAIEAYHVFEETRLKGCRINVKACISLLDALNK 858



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 148/310 (47%), Gaps = 1/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P    YT +I  + +    ++A EL  +M++      V  + +L+           A  
Sbjct: 179 RPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALA 238

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  E+    ++P++V +NV ++   K G +D A +    +   G++P+   Y +++   C
Sbjct: 239 LVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLC 298

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             GR++ AEELF  ME+       ++Y+ +I GY    + E A  L  ++  +G  P VV
Sbjct: 299 KAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVV 358

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +N++   L +  +V+ A  LF+ M++     ++  Y   ID LC  G + EA  +   +
Sbjct: 359 SFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKVEEAYMIRDEM 417

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++   N ++D LCK+ + + A+E+F +  +     + VTY  +I  L   G +
Sbjct: 418 EHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNV 477

Query: 357 DKARDLFLDM 366
           D A  LF +M
Sbjct: 478 DDAYRLFENM 487



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 165/363 (45%), Gaps = 12/363 (3%)

Query: 3   AAALFMKLRVFGCEP-NVFTYNTLINGLCRTGHTIVAL-NLFEEMANGNGEFGVVCKPNT 60
           AA  F+        P     YN ++  L    H + A+  + EEM+     +GV   PN 
Sbjct: 97  AAPFFLASSAASPHPLPADAYNAVLPFL---SHDLAAMEKVLEEMSVLG--YGV---PNP 148

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
                ++  L +   +D A+ +   M+     P    Y  LI     A     A  L  +
Sbjct: 149 AC-ADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQ 207

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G +  V  F  ++  L + G+++ A  L++ +    + P+  +YN  +D F   G 
Sbjct: 208 MQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGN 267

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A + F  ++S G K +  SY+ +I   CK   +  A  L+ +M ++   P    YNT
Sbjct: 268 VDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNT 327

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           + +G     Q E A+KL D+++  G      ++ + +  L K   + EA+ LF  ++   
Sbjct: 328 MIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMK-KD 386

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E +   YN +ID LC +G+++ A+ +   +    L  +++T NIM+  LC   K + A 
Sbjct: 387 AEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAY 446

Query: 361 DLF 363
           ++F
Sbjct: 447 EMF 449



 Score =  105 bits (263), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 107/218 (49%), Gaps = 6/218 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF + +  G E NV  Y++LI+G  + G    A  + EEM            PN  
Sbjct: 654 EAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKG------LTPNVY 707

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+ +++D L K   +++A   F  MK+   +PN  TY+ LI+G C    +N+A   + EM
Sbjct: 708 TWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEM 767

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG+ PNVV++  ++  L K G + +A  L E     G  P+A  +N L++G     R 
Sbjct: 768 QKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRA 827

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
             A  +F      GC+ NV +   L++   K + +E A
Sbjct: 828 IEAYHVFEETRLKGCRINVKACISLLDALNKAECLEQA 865



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++   C PN +TY+ LINGLCR      A   ++EM       G+V  PN V
Sbjct: 724 EALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQ----GLV--PNVV 777

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I GL K G +  A  LF + K     P+  ++N+LI G  +AN   EA  +F E 
Sbjct: 778 TYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIEAYHVFEET 837

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             +G + NV +   +++ L K   +++A+
Sbjct: 838 RLKGCRINVKACISLLDALNKAECLEQAA 866



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 7/189 (3%)

Query: 188 FVSMESMGCKHNVFSYSI-------LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             +ME +  + +V  Y +       L++   + + ++ A  + + M     +P    Y  
Sbjct: 128 LAAMEKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTV 187

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   + E  Q ERA +L  +MQ  G       + T +  L + G +  A+ L   ++   
Sbjct: 188 LIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSC 247

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E DI  YN  ID   K+G + +AW+ F  L    L  D V+Y  MI  LC  G++ +A 
Sbjct: 248 LEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAE 307

Query: 361 DLFLDMEAK 369
           +LF  ME +
Sbjct: 308 ELFGQMETE 316


>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
 gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 465

 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 186/359 (51%), Gaps = 6/359 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G +PN+   N LIN  C+ G    A ++F ++        +   PNT+T+TT+I 
Sbjct: 112 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI------LKMGYNPNTITFTTLIK 165

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           GLC +G + +A     K+       N ++Y +LI G C   +   A  L   +  + VQP
Sbjct: 166 GLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQP 225

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NVV ++ I++ +CK+  +++A  L   M+  G+ PN   Y+ L+ GF   G++  A +LF
Sbjct: 226 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLF 285

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M S   K +V++++IL++ +CK+ +I  AL L  EM  +G  P++V Y+++   L + 
Sbjct: 286 NKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKT 345

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
           H+V++A  L  +++  G+  +   Y   IDGLC +G + +A  +F  L +  Y++ +  Y
Sbjct: 346 HRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTY 405

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             +  G CK G    A  L   +     I D  TY ++  +L   G+ D A  L  + E
Sbjct: 406 IVMFYGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECE 464



 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 164/290 (56%), Gaps = 6/290 (2%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           KL   G + N  +Y TLI+GLC+ G T  AL+L   +       G + +PN V Y+TIID
Sbjct: 182 KLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVD------GKLVQPNVVMYSTIID 235

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G+CK+  V+ A +L+ +M  + I+PNVVTY++LI GF       +A  LF +M+ + ++P
Sbjct: 236 GMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKP 295

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +V +FN++++  CK+GK+  A +L++ M   G  PN   Y++++D  C T RV++A  L 
Sbjct: 296 DVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALL 355

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             ++  G + N+ +Y+ILI+G C + ++E A +++ ++L KG    VV Y  +F G  + 
Sbjct: 356 TKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKK 415

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
              + A  L  +M+ +G   D   Y      L K G    A +L R   I
Sbjct: 416 GLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRECEI 465



 Score =  180 bits (457), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 161/312 (51%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P  + +  I+  L K         L  KM+   I PN+V  N LI+ FC       A  +
Sbjct: 85  PPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSV 144

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F +++  G  PN ++F  ++  LC  G++ +A    + ++ +G + N   Y TL+DG C 
Sbjct: 145 FAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCK 204

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G    A +L   ++    + NV  YS +I+G CK+K +  A  LYSEM+SKGI P+VV 
Sbjct: 205 VGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVT 264

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+ L  G F + +++ A  LF++M    +  D + +   +D  CK+G I  A++L   + 
Sbjct: 265 YSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMH 324

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 +I  Y+ ++D LCK+ R+  A  L   L    +  ++ TY I+I  LC  GK++
Sbjct: 325 DRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLE 384

Query: 358 KARDLFLDMEAK 369
            AR++F D+  K
Sbjct: 385 DARNIFEDLLVK 396



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 160/311 (51%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           K N + Y++          VD A  LF  +  +N  P  + +N ++     +  ++    
Sbjct: 49  KINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLY 108

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  +M  +G++PN+V+ N+++N  C+ G +  A  +   ++++G  PN   + TL+ G C
Sbjct: 109 LSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLC 168

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           L G++++A      + ++G + N  SY  LI+G CK  E   AL L   +  K ++P+VV
Sbjct: 169 LKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVV 228

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +Y+T+  G+ +   V  AF L+ EM   G++ +   Y   I G    G + +AV+LF  +
Sbjct: 229 MYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKM 288

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                + D+  +N L+D  CKSG++  A +L   +       ++VTY+ ++ ALC   ++
Sbjct: 289 ISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRV 348

Query: 357 DKARDLFLDME 367
           DKA  L   ++
Sbjct: 349 DKAVALLTKLK 359



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 134/276 (48%)

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N++ Y+S    F   ND ++A  LF  ++ Q   P  + FN I+  L K+        L 
Sbjct: 51  NLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLS 110

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
           + M   G++PN    N L++ FC  G +  A  +F  +  MG   N  +++ LI G C  
Sbjct: 111 KKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLK 170

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            +I  AL+ + ++++ G + + + Y TL  GL ++ +   A  L   +    V  +   Y
Sbjct: 171 GQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMY 230

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            T IDG+CK+ ++ +A +L+  +       ++  Y+ LI G    G+LK A +LF  +  
Sbjct: 231 STIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMIS 290

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +  DV T+NI++   C  GK+  A  L  +M  +
Sbjct: 291 ENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDR 326



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 116/224 (51%), Gaps = 6/224 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L+ ++   G  PNV TY+ LI+G    G    A++LF +M + N       KP+  
Sbjct: 245 DAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISEN------IKPDVY 298

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++D  CK G +  A +L  +M D    PN+VTY+S++   C  +  ++A  L  ++
Sbjct: 299 TFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKL 358

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            DQG++PN+ ++ ++++ LC +GK+++A  + E ++  G       Y  +  GFC  G  
Sbjct: 359 KDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLF 418

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
           + A  L   ME  GC  +  +Y ++     K  E + A  L+ E
Sbjct: 419 DEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHRE 462


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 188/389 (48%), Gaps = 35/389 (8%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------------NGEFGVV- 55
           C PN++TY  ++ GLC    T  AL L ++M +                   NG+     
Sbjct: 68  CLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAY 127

Query: 56  ---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 106
                    C  + ++Y  +  GLCK   +D+A  +F +M++  + P+++TYN L++G+C
Sbjct: 128 ELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYC 187

Query: 107 YANDWNEAKCLFIEMMD----QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
            A    +A  L  EM++      V P++ S+N +++  CK  ++  A  +L  MI+ G  
Sbjct: 188 RAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCS 247

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN   +NTL+DG CLTG+++ A  +F  M    C+    +Y++LI G+ +   I+ A   
Sbjct: 248 PNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDY 307

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           + +ML +G++P+V  Y  L  GL + ++VE A ++   M   G   +   Y   I  LCK
Sbjct: 308 FVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCK 367

Query: 283 NGYIVEAVELFRTL---RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            G I  A +LF      R  K + D  AY+ +I  LC+  +   A+E F  +    L+A 
Sbjct: 368 GGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAK 427

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEA 368
              Y  M   L    + +K   + L+  A
Sbjct: 428 PHIYKAMADGLELVQETEKVERVCLEASA 456



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 184/393 (46%), Gaps = 49/393 (12%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           E  VFTYN  +N L + GH   A  +F++M          C PN  TY  ++ GLC +  
Sbjct: 34  EHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKE------CLPNIYTYGIVLRGLCDDAK 87

Query: 76  VDKAKELFLKMKDENINPNV----------------------------------VTYNSL 101
            D A EL   M+ + + P                                    ++YN L
Sbjct: 88  TDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNML 147

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ--- 158
            +G C A+  + A  +F EM +  V P+++++N ++   C+ G+M++A  LLE MI+   
Sbjct: 148 TYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207

Query: 159 -IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
              V P+ + YNT++ GFC   ++  A  +   M   GC  NV +++ L++G C   +++
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLD 267

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A +++  M+ +  +P  V Y  L  G     ++++A   F +M R GV  + + Y   I
Sbjct: 268 EANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALI 327

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
            GLC    + +A+E+ + +     E ++  Y  +I  LCK G+++ A +LF     G   
Sbjct: 328 GGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFND-AMGSRT 386

Query: 338 A----DVVTYNIMIHALCADGKMDKARDLFLDM 366
           A    D   Y+ +I+ LC   K  +A + FL M
Sbjct: 387 AKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRM 419



 Score =  140 bits (353), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 137/300 (45%), Gaps = 36/300 (12%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A A+F ++      P++ TYN L+ G CR G    A+ L EEM  G     VV       
Sbjct: 160 ALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYN 219

Query: 56  --------------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
                                     C PN VT+ T++DGLC  G +D+A  +F  M + 
Sbjct: 220 TVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER 279

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N  P  VTY  LI G   A   ++A   F++M+ +GV+PNV ++  ++  LC   K+++A
Sbjct: 280 NCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDA 339

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF---VSMESMGCKHNVFSYSIL 206
             +L+ M   G  PN   Y  ++   C  G++ RA +LF   +   +  CK + ++YS +
Sbjct: 340 LEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTI 399

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I   C+  +   A   +  M+   +     IY  +  GL  + + E+  ++  E   HG+
Sbjct: 400 IYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERVCLEASAHGI 459



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 143/284 (50%), Gaps = 5/284 (1%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           + E+    V TYN+ ++        ++A+ +F +M+ +   PN+ ++ +++  LC + K 
Sbjct: 29  RQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A  LL+ M    + P  F+ N L+   C  G+V+ A EL+  + S  C  +  SY++L
Sbjct: 89  DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL-SDECSLDRISYNML 147

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM----Q 262
             G CK  +I+ AL+++ EM    + P ++ YN L  G     ++E+A  L +EM    +
Sbjct: 148 TYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
              V  D ++Y T I G CK   +  A  + R +       ++  +N L+DGLC +G+L 
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLD 267

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A  +F  +         VTY ++I       ++DKA D F+DM
Sbjct: 268 EANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDM 311



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 59/126 (46%), Gaps = 3/126 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   G EPNV TY  +I  LC+ G    A  LF    +  G     CKP++ 
Sbjct: 338 DALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFN---DAMGSRTAKCKPDSY 394

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+TII  LC++    +A E FL+M +  +      Y ++  G     +  + + + +E 
Sbjct: 395 AYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERVCLEA 454

Query: 122 MDQGVQ 127
              G++
Sbjct: 455 SAHGIE 460



 Score = 43.1 bits (100), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 36/69 (52%)

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
           +E  +  YN  ++ L K G    A ++F  +     + ++ TY I++  LC D K D A 
Sbjct: 33  FEHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAAL 92

Query: 361 DLFLDMEAK 369
           +L  DME+K
Sbjct: 93  ELLQDMESK 101


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 183/361 (50%), Gaps = 8/361 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A  +  +L +  C P V TY  LI      G    A+ L EEM A G         P+  
Sbjct: 201 ALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-------LLPDMY 253

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  II G+CKEG V++A EL   +  +   P+V++YN L+  F     W+E + L  EM
Sbjct: 254 TYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM 313

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +PN V+++++++ LC+ G++DEA  +L++MI+  + P+ + Y+ L+   C  GR+
Sbjct: 314 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 373

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M S GC  ++ +Y+ ++   CKN     AL +++++   G  P+V  YNT+
Sbjct: 374 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTM 433

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L+      RA  +   M   G+  D   Y + I  LC++G + EA+ L   +    +
Sbjct: 434 ISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGF 493

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              + +YN ++ GLCK  R+  A  +F  +       +  TY ++I  +   G   +A +
Sbjct: 494 RPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAME 553

Query: 362 L 362
           L
Sbjct: 554 L 554



 Score =  184 bits (466), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 182/367 (49%), Gaps = 6/367 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E A+  M++     EP+VF YN +I+G C+      A  +   M    G       P+ 
Sbjct: 129 IEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRM-KARGFL-----PDI 182

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I  LC    +  A  +  ++  +N  P V+TY  LI         NEA  L  E
Sbjct: 183 VTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 242

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P++ ++N I+  +CK G ++ A+ L+  +   G  P+   YN L+  F   G+
Sbjct: 243 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGK 302

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +  E+L   M S GC+ N  +YSILI+  C+   I+ A+S+   M+ K + PD   Y+ 
Sbjct: 303 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 362

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L +  +++ A  + D M  +G   D   Y T +  LCKNG   +A+E+F  LR + 
Sbjct: 363 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 422

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++ +YN +I  L   G    A  +  ++    +  D +TYN +I  LC DG +++A 
Sbjct: 423 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAI 482

Query: 361 DLFLDME 367
            L  DME
Sbjct: 483 GLLDDME 489



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 178/367 (48%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  +++  G  P++ TYN +I  LC      +AL + +++   N      C P  +T
Sbjct: 166 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDN------CMPTVIT 219

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I+    EG +++A +L  +M    + P++ TYN++I G C       A  L   + 
Sbjct: 220 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 279

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P+V+S+N+++      GK DE  +L+  M   G  PN   Y+ L+   C  GR++
Sbjct: 280 SKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRID 339

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   M       + +SY  LI+  CK   ++ A+ +   M+S G  PD+V YNT+ 
Sbjct: 340 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 399

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +     +A ++F++++  G   +  +Y T I  L   G    A+ +   +     +
Sbjct: 400 AALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGID 459

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   YN LI  LC+ G ++ A  L   + +      V++YNI++  LC   ++D A  +
Sbjct: 460 PDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGM 519

Query: 363 FLDMEAK 369
           F +M  K
Sbjct: 520 FAEMIEK 526



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 148/294 (50%), Gaps = 6/294 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L   L   GCEP+V +YN L+      G       L  EM      F   C+PN VT
Sbjct: 271 AAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM------FSRGCEPNKVT 324

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+ +I  LC+ G +D+A  +   M ++ + P+  +Y+ LI   C     + A  +   M+
Sbjct: 325 YSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMI 384

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G  P++V++N I+  LCKNG  ++A  +   +  +G  PN   YNT++      G  +
Sbjct: 385 SNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRS 444

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           RA  +  +M S G   +  +Y+ LI+  C++  +E A+ L  +M   G +P V+ YN + 
Sbjct: 445 RALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVL 504

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +GL ++ +++ A  +F EM   G   +   Y   I+G+   G+  EA+EL  +L
Sbjct: 505 LGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 558



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 165/339 (48%), Gaps = 7/339 (2%)

Query: 25  LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
           L+N  C+ G    +L   E + N          P+ +  T +I G      ++KA  + +
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKG------YTPDVILCTKLIKGFFNFKNIEKASRV-M 136

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
           ++ + +  P+V  YN++I GFC  N    A  +   M  +G  P++V++N+++  LC   
Sbjct: 137 EILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 196

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+  A  +L+ ++     P    Y  L++   + G +N A +L   M + G   ++++Y+
Sbjct: 197 KLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 256

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +I G CK   +E A  L + + SKG +PDV+ YN L        + +   KL  EM   
Sbjct: 257 AIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 316

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   +   Y   I  LC+ G I EA+ + + +   +   D  +Y+ LI  LCK GRL +A
Sbjct: 317 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 376

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             +   +     + D+V YN ++ ALC +G  ++A ++F
Sbjct: 377 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 415



 Score =  105 bits (261), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 94/180 (52%), Gaps = 6/180 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++  YNT++  LC+ G+   AL +F ++       G+ C PN  +Y T+I  L   
Sbjct: 387 GCLPDIVNYNTILAALCKNGNANQALEIFNKLR------GMGCPPNVSSYNTMISALWSC 440

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  +   M  + I+P+ +TYNSLI   C      EA  L  +M   G +P V+S+
Sbjct: 441 GDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY 500

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++  LCK  ++D+A  +   MI+ G RPN   Y  L++G    G    A EL  S+ S
Sbjct: 501 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 560



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 1/199 (0%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L++  C  G+ N +      + + G   +V   + LI G+   K IE A S   E+L   
Sbjct: 84  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESH 142

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            +PDV  YN +  G  +++Q+E A ++ + M+  G   D   Y   I  LC    +  A+
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +   L +      +  Y  LI+     G +  A +L   +    L+ D+ TYN +I  +
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262

Query: 351 CADGKMDKARDLFLDMEAK 369
           C +G +++A +L   + +K
Sbjct: 263 CKEGMVERAAELITSLTSK 281



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 6/81 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   +   G  P V +YN ++ GLC+      A+ +F EM          C+PN  
Sbjct: 480 EAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKG------CRPNET 533

Query: 62  TYTTIIDGLCKEGFVDKAKEL 82
           TY  +I+G+   G+  +A EL
Sbjct: 534 TYILLIEGIGFAGWRTEAMEL 554


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/354 (30%), Positives = 192/354 (54%), Gaps = 7/354 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNT 60
           EA  +  +++  G  P+ FTY+ + +GL ++      AL+L+ E A G G      K + 
Sbjct: 189 EARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYRE-AIGKG-----VKIDN 242

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T + +++GLCKEG V+KA+E+   + +  + P  V YN++++G+C   D + A     +
Sbjct: 243 YTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQ 302

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++PN ++FN ++++ C+   +D+A   ++ M+  G+ P+   YN L+DG+     
Sbjct: 303 MESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCV 362

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +R  ++   ME  G K NV SY  LIN  CK+ +I  A  +  +M+ +G+ P+  IYN 
Sbjct: 363 FSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNM 422

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   + ++  A + FDEM ++G+ A    Y + I GLCK G + EA E+F  +    
Sbjct: 423 LIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTG 482

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           +  D+  YN LI G   +G  +   EL+ ++ +  L   + T++ +I     +G
Sbjct: 483 HCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEG 536



 Score =  183 bits (464), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 187/368 (50%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +   L   G  P    YNT++NG C+ G    A+   E+M +         +PN +
Sbjct: 260 KAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG------LRPNCI 313

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + ++ID  C+   +DKA+E   KM  + I P+V TYN LI G+     ++    +  EM
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + G +PNV+S+  ++N LCK+GK+ EA  +L  M+  GV PNA +YN L+DG C  G++
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKL 433

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A   F  M   G    + +Y+ LI G CK  +++ A  ++  + S G  PDV+ YN+L
Sbjct: 434 REALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSL 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G       ++  +L++ M++ G+      +   I G  K G  ++   LF  +  +  
Sbjct: 494 ISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKET-LFNEMLQMNL 552

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN +I    ++G ++ A+ L + +    +  D  TYN +I     +GK+ + +D
Sbjct: 553 SPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKD 612

Query: 362 LFLDMEAK 369
           L  DM+AK
Sbjct: 613 LVDDMKAK 620



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 174/355 (49%), Gaps = 7/355 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYN LI+G  R         + EEM   NGE     KPN ++Y ++I+ LCK+
Sbjct: 342 GIAPSVETYNILIDGYGRLCVFSRCFQILEEMEE-NGE-----KPNVISYGSLINCLCKD 395

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A+ +   M    + PN   YN LI G C      EA   F EM   G+   +V++
Sbjct: 396 GKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTY 455

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++  LCK GK+ EA  +  L+   G  P+   YN+L+ G+   G   +  EL+ +M+ 
Sbjct: 456 NSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKK 515

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +G K  + ++  LI+G C  + I+   +L++EML   + PD V+YN +     E   V++
Sbjct: 516 LGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQK 574

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           AF L  EM   GV  D   Y + I G  K G + E  +L   ++      +   Y+ LI 
Sbjct: 575 AFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQ 634

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
           G C       A+  +R +     + +V   N +   L  DG++ +A+ +  +M A
Sbjct: 635 GHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIA 689



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 181/401 (45%), Gaps = 42/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           + + L+  +R  G  P+      ++  L  +      L+LF+EM       G+  +P+ +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMV------GLGFRPDKL 67

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   +    K G +  A ELF  MK   + PNV  YN LI G C      +A+ LF EM
Sbjct: 68  VYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEM 127

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + PN V+FN +++  CK G++D A  L E M +  V P+   +N+L+ G C   R+
Sbjct: 128 SVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRI 187

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG-ALSLYSEMLSKGIK-------- 232
             A  +   ++  G   + F+YSI+ +G  K+ +  G AL LY E + KG+K        
Sbjct: 188 EEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSI 247

Query: 233 ---------------------------PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
                                      P  VIYNT+  G  +I  ++RA    ++M+  G
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +  A+ + ID  C+   I +A E  + +        +  YN LIDG  +       +
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           ++   +       +V++Y  +I+ LC DGK+ +A  +  DM
Sbjct: 368 QILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDM 408



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 148/293 (50%), Gaps = 1/293 (0%)

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +  EL+  M+ E   P+      ++     +  ++    LF EM+  G +P+ + +   M
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
               K G +  A  L E M +  V PN FVYN L+ G C   R+  AE+LF  M      
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            N  +++ LI+GYCK  E++ A+ L   M  + ++P ++ +N+L  GL +  ++E A  +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
            +E++ +G   D + Y    DGL K +     A++L+R       ++D    + L++GLC
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K G+++ A E+ +SL    L+   V YN +++  C  G MD+A      ME++
Sbjct: 254 KEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESR 306



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 145/303 (47%), Gaps = 46/303 (15%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPN 59
           +EA  +   +   G  PN   YN LI+G C  G    AL  F+EM+ NG G         
Sbjct: 399 LEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIG-------AT 451

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC--- 116
            VTY ++I GLCK G + +A+E+F  +      P+V+TYNSLI G  Y+N  N  KC   
Sbjct: 452 IVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISG--YSNAGNSQKCLEL 509

Query: 117 ---------------------------------LFIEMMDQGVQPNVVSFNVIMNELCKN 143
                                            LF EM+   + P+ V +N +++   + 
Sbjct: 510 YETMKKLGLKPTINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQET 569

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
           G + +A  L + M+ +GVRP+   YN+L+ G    G+++  ++L   M++ G      +Y
Sbjct: 570 GHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTY 629

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           S+LI G+C  K+  GA   Y EML  G  P+V I N L  GL +  +++ A  +  EM  
Sbjct: 630 SLLIQGHCDLKDFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIA 689

Query: 264 HGV 266
           +G+
Sbjct: 690 NGM 692


>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
 gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
           salt-inducible-like protein from Arabidopsis thaliana
           BAC gb|AL021637 [Arabidopsis thaliana]
 gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 780

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 128/402 (31%), Positives = 186/402 (46%), Gaps = 46/402 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-HTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A   F +++ F C P+VFTYN ++  + R     ++A  ++ EM   N      C PN 
Sbjct: 145 KAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCN------CSPNL 198

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  ++DGL K+G    A+++F  M    I+PN VTY  LI G C     ++A+ LF E
Sbjct: 199 YTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYE 258

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  P+ V+ N +++  CK G+M EA  LL L  + G       Y++L+DG     R
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARR 318

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             +A EL+ +M     K ++  Y+ILI G  K  +IE AL L S M SKGI PD   YN 
Sbjct: 319 YTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNA 378

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +   L     +E    L  EM       D   +   I  +C+NG + EA E+F  +    
Sbjct: 379 VIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSG 438

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG-------------------------V 335
               +  +N LIDGLCKSG LK A  L   +  G                         +
Sbjct: 439 CSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSI 498

Query: 336 LIA--------------DVVTYNIMIHALCADGKMDKARDLF 363
           L A              D+V+YN++I+  C  G +D A  L 
Sbjct: 499 LKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 180/360 (50%), Gaps = 7/360 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           +L+  G   + + +  LI+   + G    A+  F  M     EF   C+P+  TY  I+ 
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK----EFD--CRPDVFTYNVILR 170

Query: 69  GLCKEG-FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
            + +E  F   A  ++ +M   N +PN+ T+  L+ G       ++A+ +F +M  +G+ 
Sbjct: 171 VMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGIS 230

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           PN V++ ++++ LC+ G  D+A +L   M   G  P++  +N L+DGFC  GR+  A EL
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
               E  G    +  YS LI+G  + +    A  LY+ ML K IKPD+++Y  L  GL +
Sbjct: 291 LRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSK 350

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             ++E A KL   M   G++ DT+ Y   I  LC  G + E   L   +   +   D   
Sbjct: 351 AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACT 410

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +  LI  +C++G ++ A E+F  + +      V T+N +I  LC  G++ +AR L   ME
Sbjct: 411 HTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKME 470



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 192/403 (47%), Gaps = 47/403 (11%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           M A A++ ++    C PN++T+  L++GL + G T  A  +F++M  G G       PN 
Sbjct: 180 MLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDM-TGRG-----ISPNR 233

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC-------------- 106
           VTYT +I GLC+ G  D A++LF +M+     P+ V +N+L+ GFC              
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293

Query: 107 ---------------------YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                                 A  + +A  L+  M+ + ++P+++ + +++  L K GK
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGK 353

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +++A +LL  M   G+ P+ + YN ++   C  G +     L + M       +  +++I
Sbjct: 354 IEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTI 413

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI   C+N  +  A  +++E+   G  P V  +N L  GL +  +++ A  L  +M+   
Sbjct: 414 LICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473

Query: 266 VAA-----DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
            A+          R+F D + ++G I++A              DI +YN LI+G C++G 
Sbjct: 474 PASLFLRLSHSGNRSF-DTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGD 532

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +  A +L   L    L  D VTYN +I+ L   G+ ++A  LF
Sbjct: 533 IDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 180/391 (46%), Gaps = 54/391 (13%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P++  Y  LI GL + G    AL L   M +          P+T  Y  +I  LC  G 
Sbjct: 335 KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG------ISPDTYCYNAVIKALCGRGL 388

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +++ + L L+M +    P+  T+  LI   C      EA+ +F E+   G  P+V +FN 
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNA 448

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVY-----NTLMDGFCLTGRVNRAEELFVS 190
           +++ LCK+G++ EA RLL   +++G   + F+      N   D    +G + +A      
Sbjct: 449 LIDGLCKSGELKEA-RLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
               G   ++ SY++LING+C+  +I+GAL L + +  KG+ PD V YNTL  GL  + +
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGR 567

Query: 251 VERAFKLF---DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-------------- 293
            E AFKLF   D+  RH  A     YR+ +   C+   ++ A  L+              
Sbjct: 568 EEEAFKLFYAKDDF-RHSPA----VYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDET 622

Query: 294 --------------RTLRIL------KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
                         R LR L      K EL +  Y   + GLC+SGR   A  +F  L  
Sbjct: 623 ANEIEQCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLRE 682

Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             ++    +   +IH LC   ++D A ++FL
Sbjct: 683 KKILVTPPSCVKLIHGLCKREQLDAAIEVFL 713



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 154/327 (47%), Gaps = 7/327 (2%)

Query: 42  FEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
            EE+ +G       C      +  +I    K G  +KA E F +MK+ +  P+V TYN +
Sbjct: 115 LEELKSGGVSVDSYC------FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVI 168

Query: 102 IHGFCYANDW-NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
           +        +   A  ++ EM+     PN+ +F ++M+ L K G+  +A ++ + M   G
Sbjct: 169 LRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRG 228

Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
           + PN   Y  L+ G C  G  + A +LF  M++ G   +  +++ L++G+CK   +  A 
Sbjct: 229 ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAF 288

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
            L       G    +  Y++L  GLF   +  +AF+L+  M +  +  D   Y   I GL
Sbjct: 289 ELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGL 348

Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
            K G I +A++L  ++       D   YN +I  LC  G L+    L   +       D 
Sbjct: 349 SKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408

Query: 341 VTYNIMIHALCADGKMDKARDLFLDME 367
            T+ I+I ++C +G + +A ++F ++E
Sbjct: 409 CTHTILICSMCRNGLVREAEEIFTEIE 435



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 126/258 (48%), Gaps = 15/258 (5%)

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E+   GV  +   F V+++   K G  ++A      M +   RP+ F YN ++       
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL------- 169

Query: 180 RVNRAEELFV--------SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           RV   EE+F          M    C  N++++ IL++G  K      A  ++ +M  +GI
Sbjct: 170 RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGI 229

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+ V Y  L  GL +    + A KLF EMQ  G   D+ A+   +DG CK G +VEA E
Sbjct: 230 SPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFE 289

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L R      + L +R Y+ LIDGL ++ R   A+EL+ ++ +  +  D++ Y I+I  L 
Sbjct: 290 LLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLS 349

Query: 352 ADGKMDKARDLFLDMEAK 369
             GK++ A  L   M +K
Sbjct: 350 KAGKIEDALKLLSSMPSK 367



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 82/407 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +   G  P+ + YN +I  LC  G      +L  EM+           P+  
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETES------FPDAC 409

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +I  +C+ G V +A+E+F +++    +P+V T+N+LI G C + +  EA+ L  +M
Sbjct: 410 THTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469

Query: 122 ---------------------------------------MDQGVQPNVVSFNVIMNELCK 142
                                                   D G  P++VS+NV++N  C+
Sbjct: 470 EVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCR 529

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
            G +D A +LL ++   G+ P++  YNTL++G    GR   A +LF + +    +H+   
Sbjct: 530 AGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDF--RHSPAV 587

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSK-------------------------------GI 231
           Y  L+   C+ +++  A +L+ + L K                                 
Sbjct: 588 YRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDT 647

Query: 232 KPDVVI---YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
           + D +    Y    IGL +  +   A  +F  ++   +     +    I GLCK   +  
Sbjct: 648 RKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDA 707

Query: 289 AVELFRTLRILKYELDIRAYNCLIDGLCKSG-RLKIAWELFRSLPRG 334
           A+E+F       ++L  R  N L+  L +S  +++I  +L   + R 
Sbjct: 708 AIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQLTNRMERA 754


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  187 bits (476), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/389 (28%), Positives = 188/389 (48%), Gaps = 35/389 (8%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------------NGEFGVV- 55
           C PN++TY  ++ GLC    T  AL L ++M +                   NG+     
Sbjct: 68  CLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAY 127

Query: 56  ---------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC 106
                    C  + ++Y  +  GLCK   +D+A  +F +M++  + P+++TYN L++G+C
Sbjct: 128 ELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYC 187

Query: 107 YANDWNEAKCLFIEMMD----QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
            A    +A  L  EM++      V P++ S+N +++  CK  ++  A  +L  MI+ G  
Sbjct: 188 RAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCS 247

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           PN   +NTL+DG CLTG+++ A  +F  M    C+    +Y++LI G+ +   I+ A   
Sbjct: 248 PNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDY 307

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           + +ML +G++P+V  Y  L  GL + ++VE A ++   M   G   +   Y   I  LCK
Sbjct: 308 FVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCK 367

Query: 283 NGYIVEAVELFRTL---RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            G I  A +LF      R  K + D  AY+ ++  LC+  +   A+E F  +    L+A 
Sbjct: 368 GGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAK 427

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDMEA 368
              Y  M   L    + +K   + L+  A
Sbjct: 428 PHIYKAMADGLELVQETEKVERVCLEASA 456



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 183/391 (46%), Gaps = 49/391 (12%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
            VFTYN  +N L + GH   A  +F++M          C PN  TY  ++ GLC +   D
Sbjct: 36  TVFTYNAYLNALVKGGHGSKARKIFDDMLYKE------CLPNIYTYGIVLRGLCDDAKTD 89

Query: 78  KAKELFLKMKDENINPNV----------------------------------VTYNSLIH 103
            A EL   M+ + + P                                    ++YN L +
Sbjct: 90  AALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDECSLDRISYNMLTY 149

Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ----I 159
           G C A+  + A  +F EM +  V P+++++N ++   C+ G+M++A  LLE MI+     
Sbjct: 150 GLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGS 209

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
            V P+ + YNT++ GFC   ++  A  +   M   GC  NV +++ L++G C   +++ A
Sbjct: 210 DVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEA 269

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
            +++  M+ +  +P  V Y  L  G     ++++A   F +M R GV  + + Y   I G
Sbjct: 270 NAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGG 329

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA- 338
           LC    + +A+E+ + +     E ++  Y  +I  LCK G+++ A +LF     G   A 
Sbjct: 330 LCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFND-AMGSRTAK 388

Query: 339 ---DVVTYNIMIHALCADGKMDKARDLFLDM 366
              D   Y+ +++ LC   K  +A + FL M
Sbjct: 389 CKPDSYAYSTIVYWLCRQSKFLEAYEYFLRM 419



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 36/300 (12%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A A+F ++      P++ TYN L+ G CR G    A+ L EEM  G     VV       
Sbjct: 160 ALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYN 219

Query: 56  --------------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
                                     C PN VT+ T++DGLC  G +D+A  +F  M + 
Sbjct: 220 TVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVER 279

Query: 90  NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
           N  P  VTY  LI G   A   ++A   F++M+ +GV+PNV ++  ++  LC   K+++A
Sbjct: 280 NCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDA 339

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF---VSMESMGCKHNVFSYSIL 206
             +L+ M   G  PN   Y  ++   C  G++ RA +LF   +   +  CK + ++YS +
Sbjct: 340 LEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTI 399

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           +   C+  +   A   +  M+   +     IY  +  GL  + + E+  ++  E   HG+
Sbjct: 400 VYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERVCLEASAHGI 459



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/284 (28%), Positives = 143/284 (50%), Gaps = 5/284 (1%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           + E+    V TYN+ ++        ++A+ +F +M+ +   PN+ ++ +++  LC + K 
Sbjct: 29  RQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKT 88

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A  LL+ M    + P  F+ N L+   C  G+V+ A EL+  + S  C  +  SY++L
Sbjct: 89  DAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRL-SDECSLDRISYNML 147

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM----Q 262
             G CK  +I+ AL+++ EM    + P ++ YN L  G     ++E+A  L +EM    +
Sbjct: 148 TYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKK 207

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
              V  D ++Y T I G CK   +  A  + R +       ++  +N L+DGLC +G+L 
Sbjct: 208 GSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLD 267

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A  +F  +         VTY ++I       ++DKA D F+DM
Sbjct: 268 EANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKANDYFVDM 311



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 3/126 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   G EPNV TY  +I  LC+ G    A  LF    +  G     CKP++ 
Sbjct: 338 DALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFN---DAMGSRTAKCKPDSY 394

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+TI+  LC++    +A E FL+M +  +      Y ++  G     +  + + + +E 
Sbjct: 395 AYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGLELVQETEKVERVCLEA 454

Query: 122 MDQGVQ 127
              G++
Sbjct: 455 SAHGIE 460



 Score = 42.4 bits (98), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN  ++ L K G    A ++F  +     + ++ TY I++  LC D K D A +L  DME
Sbjct: 40  YNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDME 99

Query: 368 AK 369
           +K
Sbjct: 100 SK 101


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  187 bits (476), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 183/361 (50%), Gaps = 8/361 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A  +  +L +  C P V TY  LI      G    A+ L EEM A G         P+  
Sbjct: 191 ALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-------LLPDMY 243

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  II G+CKEG V++A EL   +  +   P+V++YN L+  F     W+E + L  EM
Sbjct: 244 TYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM 303

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G +PN V+++++++ LC+ G++DEA  +L++MI+  + P+ + Y+ L+   C  GR+
Sbjct: 304 FSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRL 363

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M S GC  ++ +Y+ ++   CKN     AL +++++   G  P+V  YNT+
Sbjct: 364 DLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTM 423

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L+      RA  +   M   GV  D   Y + I  LC++G + EA+ L   +    +
Sbjct: 424 ISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGF 483

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
              + +YN ++ GLCK  R+  A  +F  +       +  TY ++I  +   G   +A +
Sbjct: 484 RPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAME 543

Query: 362 L 362
           L
Sbjct: 544 L 544



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 184/367 (50%), Gaps = 6/367 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +E A+  M++     EP+VF YN +I+G C+      A  +   M    G       P+ 
Sbjct: 119 IEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRM-KARGFL-----PDI 172

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY  +I  LC    +  A ++  ++  +N  P V+TY  LI         NEA  L  E
Sbjct: 173 VTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEE 232

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P++ ++N I+  +CK G ++ A+ L+  +   G +P+   YN L+  F   G+
Sbjct: 233 MLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGK 292

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +  E+L   M S GC+ N  +YSILI+  C+   I+ A+S+   M+ K + PD   Y+ 
Sbjct: 293 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 352

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L +  +++ A  + D M  +G   D   Y T +  LCKNG   +A+E+F  LR + 
Sbjct: 353 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 412

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++ +YN +I  L   G    A  +  ++    +  D +TYN +I  LC DG +++A 
Sbjct: 413 CPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAI 472

Query: 361 DLFLDME 367
            L  DME
Sbjct: 473 GLLDDME 479



 Score =  172 bits (436), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 178/367 (48%), Gaps = 6/367 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +  +++  G  P++ TYN +I  LC      +AL + +++   N      C P  +T
Sbjct: 156 ATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDN------CMPTVIT 209

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I+    EG +++A +L  +M    + P++ TYN++I G C       A  L   + 
Sbjct: 210 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 269

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G +P+V+S+N+++      GK DE  +L+  M   G  PN   Y+ L+   C  GR++
Sbjct: 270 SKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRID 329

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   M       + +SY  LI+  CK   ++ A+ +   M+S G  PD+V YNT+ 
Sbjct: 330 EAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTIL 389

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +     +A ++F++++  G   +  +Y T I  L   G    A+ +   +     +
Sbjct: 390 AALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVD 449

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   YN LI  LC+ G ++ A  L   + +      V++YNI++  LC   ++D A  +
Sbjct: 450 PDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGM 509

Query: 363 FLDMEAK 369
           F +M  K
Sbjct: 510 FAEMIEK 516



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 166/339 (48%), Gaps = 7/339 (2%)

Query: 25  LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
           L+N  C+ G    +L   E + N          P+ +  T +I G      ++KA  + +
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKG------YTPDVILCTKLIKGFFNFKNIEKASRV-M 126

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
           ++ + +  P+V  YN++I GFC  N    A  +   M  +G  P++V++N+++  LC   
Sbjct: 127 EILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRR 186

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
           K+  A ++L+ ++     P    Y  L++   + G +N A +L   M + G   ++++Y+
Sbjct: 187 KLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYN 246

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            +I G CK   +E A  L + + SKG KPDV+ YN L        + +   KL  EM   
Sbjct: 247 AIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSR 306

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G   +   Y   I  LC+ G I EA+ + + +   +   D  +Y+ LI  LCK GRL +A
Sbjct: 307 GCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLA 366

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             +   +     + D+V YN ++ ALC +G  ++A ++F
Sbjct: 367 IGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 405



 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 148/295 (50%), Gaps = 6/295 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            AA L   L   GC+P+V +YN L+      G       L  EM      F   C+PN V
Sbjct: 260 RAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM------FSRGCEPNKV 313

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I  LC+ G +D+A  +   M ++ + P+  +Y+ LI   C     + A  +   M
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G  P++V++N I+  LCKNG  ++A  +   +  +G  PN   YNT++      G  
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDR 433

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +RA  +  +M S G   +  +Y+ LI+  C++  +E A+ L  +M   G +P V+ YN +
Sbjct: 434 SRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIV 493

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            +GL ++ +++ A  +F EM   G   +   Y   I+G+   G+  EA+EL  +L
Sbjct: 494 LLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSL 548



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 6/180 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC P++  YNT++  LC+ G+   AL +F ++       G+ C PN  +Y T+I  L   
Sbjct: 377 GCLPDIVNYNTILAALCKNGNANQALEIFNKLR------GMGCPPNVSSYNTMISALWSC 430

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G   +A  +   M  + ++P+ +TYNSLI   C      EA  L  +M   G +P V+S+
Sbjct: 431 GDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVISY 490

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++  LCK  ++D+A  +   MI+ G RPN   Y  L++G    G    A EL  S+ S
Sbjct: 491 NIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMELANSLFS 550



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 1/199 (0%)

Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
           L++  C  G+ N +      + + G   +V   + LI G+   K IE A S   E+L   
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKA-SRVMEILESH 132

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            +PDV  YN +  G  +++++E A ++ + M+  G   D   Y   I  LC    +  A+
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           ++   L +      +  Y  LI+     G +  A +L   +    L+ D+ TYN +I  +
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 351 CADGKMDKARDLFLDMEAK 369
           C +G +++A +L   + +K
Sbjct: 253 CKEGMVERAAELITSLTSK 271


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 186/362 (51%), Gaps = 10/362 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L + ++  G  PN  T+N L++G C+ G    A  + + MA  N        P+  
Sbjct: 101 EARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNN------VLPDVR 154

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I GLCK+G +D+A  L  +M++  + P+VVTYN LI+G    +   +   L  EM
Sbjct: 155 TYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEM 214

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV+PN V++NV++    K GKMD A   L  M + G  P+   +NTL +G+C  GR+
Sbjct: 215 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRL 274

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +   M   G K N  + + +++  C  ++++ A  L S    +G   D V Y TL
Sbjct: 275 SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 334

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
            +G F++ +       +DEM+   +      Y T I GLC++G   ++++    L     
Sbjct: 335 IMGYFKVGKS----XXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGL 390

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   YN +I G C+ G++  A+     + +     D+ T NI++  LC +G +DKA  
Sbjct: 391 VPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALK 450

Query: 362 LF 363
           LF
Sbjct: 451 LF 452



 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 178/347 (51%), Gaps = 10/347 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TYN LING      ++    L +EM       G   KPN VTY  ++    KEG +
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEME------GKGVKPNAVTYNVVVKWYVKEGKM 239

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D A     KM++   +P+ VT+N+L +G+C A   +EA  +  EM  +G++ N V+ N I
Sbjct: 240 DNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTI 299

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++ LC   K+D+A +LL    + G   +   Y TL+ G+   G+    +E    M+    
Sbjct: 300 LHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE----MKEKEI 355

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             ++ +Y  +I G C++ + + ++   +E+L  G+ PD   YNT+ +G     QV++AF 
Sbjct: 356 IPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFH 415

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
             ++M +     D +     + GLC  G + +A++LF+T       +D   +N +I GLC
Sbjct: 416 FRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLC 475

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           + GR + A++L   +    L  D  T+N ++ AL   G+M +A +  
Sbjct: 476 EEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFM 522



 Score =  177 bits (450), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 181/359 (50%), Gaps = 10/359 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           + A+F  +   G E N  T+N LI G C       A+ L  +M +        C P+ V+
Sbjct: 32  SKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKH------FSCFPDNVS 85

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TI+D LCK+G +++A++L L MK+  + PN  T+N L+ G+C      EA  +   M 
Sbjct: 86  YNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMA 145

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              V P+V ++  ++  LCK+GK+DEA RL + M  + + P+   YN L++G        
Sbjct: 146 RNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSL 205

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +  EL   ME  G K N  +Y++++  Y K  +++ A +   +M   G  PD V +NTL 
Sbjct: 206 KGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLS 265

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +  ++  AF++ DEM R G+  ++    T +  LC    + +A +L  +     Y 
Sbjct: 266 NGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYF 325

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           +D  +Y  LI G  K G+    W+    +    +I  ++TY  MI  LC  GK D++ D
Sbjct: 326 VDEVSYGTLIMGYFKVGK-SXXWD---EMKEKEIIPSIITYGTMIGGLCRSGKTDQSID 380



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 153/310 (49%), Gaps = 3/310 (0%)

Query: 57  KPNTVTYTTIIDGLCK---EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNE 113
           KPN +T  T+I  L +   +  V  +K +F  +    +  N  T+N LI G C  N  +E
Sbjct: 7   KPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSE 66

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A  L  +M      P+ VS+N I++ LCK GK++EA  LL  M   G+ PN   +N L+ 
Sbjct: 67  AIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVS 126

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G+C  G +  A E+   M       +V +Y+ LI G CK+ +I+ A  L  EM +  + P
Sbjct: 127 GYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLP 186

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            VV YN L  G FE     + F+L DEM+  GV  +   Y   +    K G +  A    
Sbjct: 187 HVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 246

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           R +    +  D   +N L +G CK+GRL  A+ +   + R  L  + VT N ++H LC +
Sbjct: 247 RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 306

Query: 354 GKMDKARDLF 363
            K+D A  L 
Sbjct: 307 RKLDDAYKLL 316



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 168/368 (45%), Gaps = 39/368 (10%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           K+   G  P+  T+NTL NG C+ G    A  + +EM+          K N+VT  TI+ 
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKG------LKMNSVTLNTILH 301

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF---CYANDWNEAKCLFIEMMDQG 125
            LC E  +D A +L           + V+Y +LI G+     +  W+E       M ++ 
Sbjct: 302 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE-------MKEKE 354

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+++++  ++  LC++GK D++      +++ G+ P+   YNT++ G+C  G+V++A 
Sbjct: 355 IIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAF 414

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
                M     K ++F+ +IL+ G C    ++ AL L+   +SKG   D V +NT+  GL
Sbjct: 415 HFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGL 474

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR------TLRIL 299
            E  + E AF L  EM+   +  D + +   +  L   G + EA E          L+  
Sbjct: 475 CEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKLQDQ 534

Query: 300 KYELDIR-----------------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
              L+ R                 A++  I+ LC  G+ K A  + +   +  +I    T
Sbjct: 535 TISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKST 594

Query: 343 YNIMIHAL 350
           Y  ++  L
Sbjct: 595 YISLMEGL 602



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 119/245 (48%), Gaps = 3/245 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDE---ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++PN+++ N ++  L +         +  +   +I++GV  N   +N L+ G C+  +++
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  L   M+   C  +  SY+ +++  CK  ++  A  L  +M + G+ P+   +N L 
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  ++  ++ A ++ D M R+ V  D   Y T I GLCK+G I EA  L   +  LK  
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             +  YN LI+G  +       +EL   +    +  + VTYN+++     +GKMD A + 
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 363 FLDME 367
              ME
Sbjct: 246 LRKME 250



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 105/217 (48%), Gaps = 3/217 (1%)

Query: 156 MIQIGVRPNAFVYNTLMDG---FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           M ++ ++PN    NTL+     +     V  ++ +F  +  +G + N  +++ILI G C 
Sbjct: 1   MKRLHLKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCI 60

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             ++  A+ L  +M      PD V YNT+   L +  ++  A  L  +M+ +G+  +   
Sbjct: 61  ENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNT 120

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           +   + G CK G++ EA E+   +       D+R Y  LI GLCK G++  A+ L   + 
Sbjct: 121 FNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEME 180

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
              L+  VVTYN++I+         K  +L  +ME K
Sbjct: 181 NLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGK 217


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 186/367 (50%), Gaps = 15/367 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A LF         PNV T N +I+ LC+      A ++FE M +       VC PN 
Sbjct: 430 MERAGLF---------PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK------VCTPNA 474

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT++++IDGL K G VD A  L+ KM D    P  + Y SLI  F       +   ++ E
Sbjct: 475 VTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 534

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  P++   N  M+ + K G+ ++   L   +   G  P+A  Y+ L+ G    G 
Sbjct: 535 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 594

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            N   ELF +M+  GC  +  +Y+ +I+G+CK+ ++  A  L  EM  KG  P VV Y +
Sbjct: 595 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 654

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +I +++ A+ LF+E + +G+  +   Y + IDG  K G I EA  +   L    
Sbjct: 655 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 714

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  +NCL+D L K+  +  A   F+S+       + +TY+I+I+ LC   K +KA 
Sbjct: 715 LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAF 774

Query: 361 DLFLDME 367
             + +M+
Sbjct: 775 VFWQEMQ 781



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/363 (33%), Positives = 177/363 (48%), Gaps = 9/363 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFE-EMANGNGEFGVVCKPNT 60
           EA  LF +L      P  + YNT+I G    G    A  L E + A G+        P+ 
Sbjct: 318 EAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS-------IPSV 370

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           + Y  I+  L K+  V++A  +F +MK + + PNV TYN LI   C     N A  +  +
Sbjct: 371 IAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDD 429

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ PNV++ N++++ LCK  K++EA  + E M      PNA  +++L+DG    GR
Sbjct: 430 MERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGR 489

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A  L+  M   G       Y+ LI  + K    E    +Y EM+  G  PD+ + NT
Sbjct: 490 VDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINT 549

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
               +F+  + E+   LF E+  HG   D  +Y   I GL K G   E  ELF  ++   
Sbjct: 550 YMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG 609

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             LD  AYN +IDG CKSG++  A++L   +        VVTY  +I  L    ++D+A 
Sbjct: 610 CVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAY 669

Query: 361 DLF 363
            LF
Sbjct: 670 MLF 672



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 175/358 (48%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  + +  G  P+V  YN ++  L +      AL +FEEM            PN  
Sbjct: 353 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD-------AVPNVP 405

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC+EG ++ A E+   M+   + PNV+T N +I   C A    EA  +F  M
Sbjct: 406 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 465

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+   PN V+F+ +++ L K G++D+A  L E M+  G  P A VY +L+  F   GR 
Sbjct: 466 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRK 525

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +++  M   GC  ++   +  ++   K  E E   +L+ E+ + G  PD   Y+ L
Sbjct: 526 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 585

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +       ++LF  M+  G   DT AY   IDG CK+G + +A +L   +++  +
Sbjct: 586 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 645

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +  Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A
Sbjct: 646 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 703



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 193/427 (45%), Gaps = 63/427 (14%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------------FG 53
           LF +++  G E NV  + TLI    R G    AL+L +EM + + +            FG
Sbjct: 217 LFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFG 276

Query: 54  VVCK-----------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
              K                 P+ VTYT++I  LCK   +D+A ELF +++     P   
Sbjct: 277 KAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAY 336

Query: 97  TYNSLIHGFCYANDWNEA-----------------------KCL-----------FIEMM 122
            YN++I G+  A  ++EA                        CL             E M
Sbjct: 337 AYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEM 396

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +   PNV ++N++++ LC+ GK++ A  + + M + G+ PN    N ++D  C   ++ 
Sbjct: 397 KRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLE 456

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +F  M+   C  N  ++S LI+G  K   ++ A SLY +ML  G  P  ++Y +L 
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 516

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
              F+  + E   K++ EM   G + D     T++D + K G   +   LFR +    + 
Sbjct: 517 RSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFI 576

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D R+Y+ LI GL K+G     +ELF ++     + D   YN +I   C  GK++KA  L
Sbjct: 577 PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL 636

Query: 363 FLDMEAK 369
             +M+ K
Sbjct: 637 LEEMKVK 643



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 163/320 (50%), Gaps = 6/320 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF ++   G  P+  +Y+ LI+GL + G       LF  M          C  +T  Y 
Sbjct: 565 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG------CVLDTHAYN 618

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +IDG CK G V+KA +L  +MK +   P VVTY S+I G    +  +EA  LF E    
Sbjct: 619 AVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 678

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV ++ +++   K G++DEA  ++E ++Q G+ PN + +N L+D       +N A
Sbjct: 679 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 738

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F SM+ + C  N  +YSILING C+ ++   A   + EM   G+KP+ + Y T+  G
Sbjct: 739 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 798

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +   +  A  LF   + +G   D+ +Y   I+GL      ++A  LF   R+    + 
Sbjct: 799 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 858

Query: 305 IRAYNCLIDGLCKSGRLKIA 324
            +    L+D L K+  L+ A
Sbjct: 859 TKTCVVLLDALHKAECLEQA 878



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 182/397 (45%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA ++F  +    C PN  T+++LI+GL + G    A +L+E+M +              
Sbjct: 457 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 516

Query: 48  ------GNGEFG---------VVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                 G  E G           C P+     T +D + K G  +K + LF ++      
Sbjct: 517 RSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFI 576

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  +Y+ LIHG   A   NE   LF  M +QG   +  ++N +++  CK+GK+++A +L
Sbjct: 577 PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL 636

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M   G  P    Y +++DG     R++ A  LF   +S G K NV  YS LI+G+ K
Sbjct: 637 LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGK 696

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  +  E++ KG+ P+V  +N L   L +  ++  A   F  M+      +   
Sbjct: 697 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQIT 756

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+GLC+     +A   ++ ++ L  + +   Y  +I GL K+G +  A  LF    
Sbjct: 757 YSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFK 816

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               I D  +YN MI  L +  K   A  LF +   K
Sbjct: 817 ANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLK 853



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 1/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
           +P    YT +I  L +    D    LF +M++     NV  + +LI  F      + A  
Sbjct: 192 RPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDAALS 251

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           L  EM    +  ++V +NV ++   K GK+D + +    M   G+ P+   Y +++   C
Sbjct: 252 LLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLC 311

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              R++ A ELF  +E        ++Y+ +I GY    + + A  L     +KG  P V+
Sbjct: 312 KANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVI 371

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            YN +   L +  +VE A ++F+EM+R  V  +   Y   ID LC+ G +  A+E+   +
Sbjct: 372 AYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDM 430

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++   N +ID LCK+ +L+ A  +F  +   V   + VT++ +I  L   G++
Sbjct: 431 ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRV 490

Query: 357 DKARDLFLDM 366
           D A  L+  M
Sbjct: 491 DDAYSLYEKM 500



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/349 (24%), Positives = 157/349 (44%), Gaps = 7/349 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
            YN+L+  + R         + EEM+     FG    P++     ++    K   + +A 
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSG--FG----PSSNISIELVANCVKSRKLREAF 180

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           ++   M+     P    Y  LI       + +    LF +M + G + NV  F  ++   
Sbjct: 181 DIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVF 240

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            + G++D A  LL+ M    +  +  +YN  +D F   G+V+ + + F  M+S G   + 
Sbjct: 241 AREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDD 300

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            +Y+ +I   CK   ++ A+ L+ ++      P    YNT+ +G     + + A+ L + 
Sbjct: 301 VTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLER 360

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
            +  G      AY   +  L K   + EA+ +F  ++      ++  YN LID LC+ G+
Sbjct: 361 QKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-NVPTYNILIDMLCREGK 419

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L  A E+   + R  L  +V+T NIMI  LC   K+++A  +F  M+ K
Sbjct: 420 LNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK 468



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++   C PN  TY+ LINGLCR      A   ++EM     + G+  KPNT+
Sbjct: 737 EALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ----KLGL--KPNTI 790

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I GL K G + +A  LF + K     P+  +YN++I G   AN   +A  LF E 
Sbjct: 791 TYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEET 850

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             +G   +  +  V+++ L K   +++A+
Sbjct: 851 RLKGCNIHTKTCVVLLDALHKAECLEQAA 879


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  187 bits (475), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 191/390 (48%), Gaps = 29/390 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA     K+ + G  P+  TYN +I GLC+ G    AL+L E+M+               
Sbjct: 183 EACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSII 242

Query: 47  -----NGN---------GEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                 GN          +    C P  +TYT +I+ +CK     +A E+   M  E   
Sbjct: 243 RCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCY 302

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++VTYNSL++       + +   + + ++  G+QPN V++N +++ L  +G  DE   +
Sbjct: 303 PDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDI 362

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L++M +    P    YN L++G C +G ++RA   + +M +  C  ++ +Y+ L++G CK
Sbjct: 363 LKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCK 422

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+  + L + ++     P +V YN +  GL  +  +E A +L+DEM   G+  D   
Sbjct: 423 EGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEIT 482

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           + +   G C+   + EA EL + + + +  +   AY C+I GLC+  ++ IA ++   + 
Sbjct: 483 HSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMV 542

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDL 362
           +G    D   Y+ +I A+   G + +A DL
Sbjct: 543 KGQCNPDERIYSALIKAVADGGMLKEANDL 572



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 148/294 (50%), Gaps = 11/294 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTG-HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           GC P++ TYN+L+N   + G +   AL +   +++G        +PN VTY T+I  L  
Sbjct: 300 GCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHG-------MQPNAVTYNTLIHSLIN 352

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G+ D+  ++   M + +  P  VTYN L++G C +   + A   +  M+ +   P++++
Sbjct: 353 HGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIIT 412

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++ LCK G +DE  +LL L++     P    YN ++DG    G +  A+EL+  M 
Sbjct: 413 YNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMV 472

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   +  ++S L  G+C+  ++E A  L  EM  K  +     Y  + +GL    +V+
Sbjct: 473 DKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVD 532

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL---RILKYEL 303
            A ++ D M +     D   Y   I  +   G + EA +L +TL   +ILK E+
Sbjct: 533 IAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLIKWKILKKEI 586



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 167/356 (46%), Gaps = 12/356 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+  +   LI G  R G    A     +M    G       P+T+TY  +I GLCK G +
Sbjct: 163 PHFPSCTNLIRGFIRKGLVDEACKTLNKMVMSGG------VPDTITYNMVIGGLCKNGRL 216

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A +L   M     +P+ +TYNS+I       ++N+A   + + + +G  P ++++ V+
Sbjct: 217 RSALDLVEDMSLSGCSPDAITYNSIIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVL 276

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  +CK      A  +LE M   G  P+   YN+L++     G+      + +++ S G 
Sbjct: 277 IELVCKYCGAARALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGM 336

Query: 197 KHNVFSYSILINGYCKN---KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           + N  +Y+ LI+    +    E++  L + +E  S    P  V YN L  GL +   ++R
Sbjct: 337 QPNAVTYNTLIHSLINHGYWDEVDDILKIMNETSSP---PTHVTYNILLNGLCKSGLLDR 393

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A   +  M     + D   Y T + GLCK G+I E ++L   L        +  YN +ID
Sbjct: 394 AISFYSTMVTENCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVID 453

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GL + G ++ A EL+  +    +I D +T++ +    C   ++++A +L  +M  K
Sbjct: 454 GLARLGSMESAKELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMK 509



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/350 (27%), Positives = 154/350 (44%), Gaps = 6/350 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
            T N ++  LC  G   VA  L + MA  +        P+  + T +I G  ++G VD+A
Sbjct: 131 MTNNEILQRLCSRGKLTVAARLIDVMARKSQ------IPHFPSCTNLIRGFIRKGLVDEA 184

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            +   KM      P+ +TYN +I G C       A  L  +M   G  P+ +++N I+  
Sbjct: 185 CKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRC 244

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L   G  ++A       ++ G  P    Y  L++  C      RA E+   M   GC  +
Sbjct: 245 LFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPD 304

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           + +Y+ L+N   K  + E    +   +LS G++P+ V YNTL   L      +    +  
Sbjct: 305 IVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDILK 364

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M           Y   ++GLCK+G +  A+  + T+       DI  YN L+ GLCK G
Sbjct: 365 IMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKEG 424

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +    +L   L        +VTYNI+I  L   G M+ A++L+ +M  K
Sbjct: 425 FIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDK 474



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/223 (28%), Positives = 111/223 (49%), Gaps = 6/223 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P   TYN L+NGLC++G    A++ +  M   N      C P+ +TY T++ GLCKEGF+
Sbjct: 373 PTHVTYNILLNGLCKSGLLDRAISFYSTMVTEN------CSPDIITYNTLLSGLCKEGFI 426

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           D+  +L   +   + +P +VTYN +I G         AK L+ EM+D+G+ P+ ++ + +
Sbjct: 427 DEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITHSSL 486

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
               C+  +++EA+ LL+ M     R     Y  ++ G C   +V+ A ++   M    C
Sbjct: 487 TWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDLMVKGQC 546

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
             +   YS LI        ++ A  L+  ++   I    ++ N
Sbjct: 547 NPDERIYSALIKAVADGGMLKEANDLHQTLIKWKILKKEIMLN 589



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 111/238 (46%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           VQ + ++ N I+  LC  GK+  A+RL+++M +    P+      L+ GF   G V+ A 
Sbjct: 126 VQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEAC 185

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +    M   G   +  +Y+++I G CKN  +  AL L  +M   G  PD + YN++   L
Sbjct: 186 KTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCL 245

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           F+     +A   + +  R G       Y   I+ +CK      A+E+   + +     DI
Sbjct: 246 FDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDI 305

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             YN L++   K G+ +    +  +L    +  + VTYN +IH+L   G  D+  D+ 
Sbjct: 306 VTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDIL 363



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%)

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
           ++ D +  N +   L    ++  A +L D M R        +    I G  + G + EA 
Sbjct: 126 VQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEAC 185

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           +    + +     D   YN +I GLCK+GRL+ A +L   +       D +TYN +I  L
Sbjct: 186 KTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCL 245

Query: 351 CADGKMDKARDLFLDMEAK 369
              G  ++A + + D   K
Sbjct: 246 FDKGNFNQAVNFWRDQLRK 264


>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/367 (31%), Positives = 186/367 (50%), Gaps = 15/367 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A LF         PNV T N +I+ LC+      A ++FE M +       VC PN 
Sbjct: 185 MERAGLF---------PNVLTVNIMIDRLCKAQKLEEACSIFEGMDDK------VCTPNA 229

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT++++IDGL K G VD A  L+ KM D    P  + Y SLI  F       +   ++ E
Sbjct: 230 VTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 289

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+  G  P++   N  M+ + K G+ ++   L   +   G  P+A  Y+ L+ G    G 
Sbjct: 290 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGL 349

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            N   ELF +M+  GC  +  +Y+ +I+G+CK+ ++  A  L  EM  KG  P VV Y +
Sbjct: 350 ANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGS 409

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  GL +I +++ A+ LF+E + +G+  +   Y + IDG  K G I EA  +   L    
Sbjct: 410 VIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKG 469

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              ++  +NCL+D L K+  +  A   F+S+       + +TY+I+I+ LC   K +KA 
Sbjct: 470 LTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAF 529

Query: 361 DLFLDME 367
             + +M+
Sbjct: 530 VFWQEMQ 536



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/358 (31%), Positives = 175/358 (48%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  + +  G  P+V  YN ++  L +      AL +FEEM            PN  
Sbjct: 108 EAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD-------AVPNVP 160

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID LC+EG ++ A E+   M+   + PNV+T N +I   C A    EA  +F  M
Sbjct: 161 TYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 220

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D+   PN V+F+ +++ L K G++D+A  L E M+  G  P A VY +L+  F   GR 
Sbjct: 221 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRK 280

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
               +++  M   GC  ++   +  ++   K  E E   +L+ E+ + G  PD   Y+ L
Sbjct: 281 EDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL 340

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +       ++LF  M+  G   DT AY   IDG CK+G + +A +L   +++  +
Sbjct: 341 IHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGH 400

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
              +  Y  +IDGL K  RL  A+ LF       +  +VV Y+ +I      G++D+A
Sbjct: 401 PPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEA 458



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 160/314 (50%), Gaps = 6/314 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF ++   G  P+  +Y+ LI+GL + G       LF  M          C  +T  Y 
Sbjct: 320 ALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQG------CVLDTHAYN 373

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +IDG CK G V+KA +L  +MK +   P VVTY S+I G    +  +EA  LF E    
Sbjct: 374 AVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSN 433

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NVV ++ +++   K G++DEA  ++E ++Q G+ PN + +N L+D       +N A
Sbjct: 434 GIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEA 493

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F SM+ + C  N  +YSILING C+ ++   A   + EM   G+KP+ + Y T+  G
Sbjct: 494 LICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISG 553

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +   +  A  LF   + +G   D+ +Y   I+GL      ++A  LF   R+    + 
Sbjct: 554 LAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIH 613

Query: 305 IRAYNCLIDGLCKS 318
            +    L+D L K+
Sbjct: 614 TKTCVVLLDALHKA 627



 Score =  163 bits (412), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 182/397 (45%), Gaps = 29/397 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA ++F  +    C PN  T+++LI+GL + G    A +L+E+M +              
Sbjct: 212 EACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLI 271

Query: 48  ------GNGEFG---------VVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                 G  E G           C P+     T +D + K G  +K + LF ++      
Sbjct: 272 RSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFI 331

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+  +Y+ LIHG   A   NE   LF  M +QG   +  ++N +++  CK+GK+++A +L
Sbjct: 332 PDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQL 391

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M   G  P    Y +++DG     R++ A  LF   +S G K NV  YS LI+G+ K
Sbjct: 392 LEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGK 451

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
              I+ A  +  E++ KG+ P+V  +N L   L +  ++  A   F  M+      +   
Sbjct: 452 VGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQIT 511

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y   I+GLC+     +A   ++ ++ L  + +   Y  +I GL K+G +  A  LF    
Sbjct: 512 YSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFK 571

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               I D  +YN MI  L +  K   A  LF +   K
Sbjct: 572 ANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLK 608



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 174/378 (46%), Gaps = 17/378 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLING----------LCRTGHTIVALNLFEEMANGNGE 51
           EA  +   +R F   P    Y  LI            LC+      A+ LFE++      
Sbjct: 28  EAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQLEQNRK- 86

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
                 P    Y T+I G    G  D+A  L  + K +   P+V+ YN ++         
Sbjct: 87  -----VPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRV 141

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            EA  +F EM    V PNV ++N++++ LC+ GK++ A  + + M + G+ PN    N +
Sbjct: 142 EEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIM 200

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D  C   ++  A  +F  M+   C  N  ++S LI+G  K   ++ A SLY +ML  G 
Sbjct: 201 IDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGH 260

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P  ++Y +L    F+  + E   K++ EM   G + D     T++D + K G   +   
Sbjct: 261 VPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRA 320

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LFR +    +  D R+Y+ LI GL K+G     +ELF ++     + D   YN +I   C
Sbjct: 321 LFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFC 380

Query: 352 ADGKMDKARDLFLDMEAK 369
             GK++KA  L  +M+ K
Sbjct: 381 KSGKVNKAYQLLEEMKVK 398



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/149 (34%), Positives = 79/149 (53%), Gaps = 6/149 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F  ++   C PN  TY+ LINGLCR      A   ++EM     + G+  KPNT+
Sbjct: 492 EALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQ----KLGL--KPNTI 545

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I GL K G + +A  LF + K     P+  +YN++I G   AN   +A  LF E 
Sbjct: 546 TYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEET 605

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             +G   +  +  V+++ L K   +++A+
Sbjct: 606 RLKGCNIHTKTCVVLLDALHKAECLEQAA 634



 Score = 43.5 bits (101), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 10/98 (10%)

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDG----------LCKSGRLKIAWELFRSL 331
           K+  + EA ++ +T+R  K+     AY  LI            LCK+ RL  A ELF  L
Sbjct: 22  KSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQL 81

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +   +     YN MI    + GK D+A  L    +AK
Sbjct: 82  EQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAK 119


>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
          Length = 378

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 171/314 (54%), Gaps = 6/314 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A+F  ++ +G  P+V +Y+ LI+GL + G      ++F  M      F +    +   Y 
Sbjct: 45  AIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRG--FAL----DARAYN 98

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            ++DG CK G VDKA E   +MK +++ P V TY S+I G    +  +EA  LF E   +
Sbjct: 99  AVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSK 158

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++ NV+ ++ +++   K G++DEA  +LE M++ G+ PN + +N+LMD       +N A
Sbjct: 159 GIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEA 218

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
              F SM+ M C  N ++YSILING C+ ++   A   + EM  +G+ P+VV Y T+  G
Sbjct: 219 LICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISG 278

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L ++  +  A  LF+  + +G   D  ++   I+G+      +EA  +F   R+    ++
Sbjct: 279 LAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRIN 338

Query: 305 IRAYNCLIDGLCKS 318
           ++A   L+D L K+
Sbjct: 339 VKACISLLDALNKA 352



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 162/338 (47%), Gaps = 11/338 (3%)

Query: 26  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLK 85
           ++G    GH I     F+EM N  G     C+P+     T +D + K G V+K + +F  
Sbjct: 1   MHGRKEDGHKI-----FKEM-NRRG-----CQPDLTLLNTYMDCVFKAGDVEKGRAIFED 49

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           +K     P+V +Y+ LIHG   A    E   +F  M  +G   +  ++N +++  CK+GK
Sbjct: 50  IKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGK 109

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           +D+A   LE M    V P    Y +++DG     R++ A  LF   +S G + NV  YS 
Sbjct: 110 VDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSS 169

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           LI+G+ K   I+ A  +  EM+ KG+ P+V  +N+L   L +  ++  A   F  M+   
Sbjct: 170 LIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMK 229

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
            + +T+ Y   I+GLC+     +A   ++ ++      ++  Y  +I GL K G +  A 
Sbjct: 230 CSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDAC 289

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            LF        I D  ++N +I  +    +  +A  +F
Sbjct: 290 SLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVF 327



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 149/296 (50%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E +++F  ++  G   +   YN +++G C++G    A    EEM   +        P   
Sbjct: 77  ETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKH------VPPTVA 130

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +IIDGL K   +D+A  LF + K + I  NV+ Y+SLI GF      +EA  +  EM
Sbjct: 131 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 190

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M +G+ PNV ++N +M+ L K  +++EA    + M ++   PN + Y+ L++G C   + 
Sbjct: 191 MKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 250

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N+A   +  M+  G   NV +Y+ +I+G  K   I  A SL+    + G  PD   +N L
Sbjct: 251 NKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNAL 310

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             G+   ++   A+ +F+E +  G   +  A  + +D L K   I +A  +   LR
Sbjct: 311 IEGMSHANRAIEAYHVFEETRLRGCRINVKACISLLDALNKAECIEQAAVVGAVLR 366



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 127/253 (50%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F EM  +G QP++   N  M+ + K G +++   + E +   G  P+   Y+ L+ G  
Sbjct: 11  IFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLT 70

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G+      +F +M+  G   +  +Y+ +++G+CK+ +++ A     EM  K + P V 
Sbjct: 71  KAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVA 130

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y ++  GL +I +++ A+ LF+E +  G+  +   Y + IDG  K G I EA  +   +
Sbjct: 131 TYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEM 190

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  ++  +N L+D L K+  +  A   F+S+       +  TY+I+I+ LC   K 
Sbjct: 191 MKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 250

Query: 357 DKARDLFLDMEAK 369
           +KA   + +M+ +
Sbjct: 251 NKAFVFWQEMQKQ 263



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 113/225 (50%)

Query: 143 NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
           +G+ ++  ++ + M + G +P+  + NT MD     G V +   +F  ++  G   +V S
Sbjct: 2   HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRS 61

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           YSILI+G  K  +     S++  M  +G   D   YN +  G  +  +V++A++  +EM+
Sbjct: 62  YSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMK 121

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
              V      Y + IDGL K   + EA  LF   +    EL++  Y+ LIDG  K GR+ 
Sbjct: 122 VKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRID 181

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A+ +   + +  L  +V T+N ++ AL    ++++A   F  M+
Sbjct: 182 EAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMK 226



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 91/193 (47%)

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
           + GR     ++F  M   GC+ ++   +  ++   K  ++E   +++ ++   G  PDV 
Sbjct: 1   MHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 60

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y+ L  GL +  Q      +F  M++ G A D  AY   +DG CK+G + +A E    +
Sbjct: 61  SYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM 120

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           ++      +  Y  +IDGL K  RL  A+ LF       +  +V+ Y+ +I      G++
Sbjct: 121 KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 180

Query: 357 DKARDLFLDMEAK 369
           D+A  +  +M  K
Sbjct: 181 DEAYLILEEMMKK 193


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  187 bits (475), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 114/361 (31%), Positives = 180/361 (49%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+ K++  G +P++ T ++L+ G C  G    AL L+ EM  G G       PN V
Sbjct: 416 EAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMP-GKG-----FPPNEV 469

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT++ G  K+   DKA  L  +M    ++    TYN LI+G C  +   E   +    
Sbjct: 470 TYTTLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRF 529

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P  +++N I+N   K G M  A  +   M + G+ PN   Y + +DG+C T   
Sbjct: 530 VSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCC 589

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +L + M   G   ++ +Y+  IN +CK   +  AL     +L  G+ P+V +YN+ 
Sbjct: 590 DLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSF 649

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G   +  +  A K +  M +  +AADT  Y T IDG  K G +  A+EL+  +     
Sbjct: 650 VTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHN 709

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D + +  L  GLC+SG +  A  L   + R  +  + VTYN++I+A   DGK+ +A  
Sbjct: 710 IPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQ 769

Query: 362 L 362
           L
Sbjct: 770 L 770



 Score =  171 bits (432), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 181/366 (49%), Gaps = 6/366 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +  K+R  G +P  FTYN++++ L + G    AL L ++M    G+     K +  
Sbjct: 241 RAVQVLGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGK-----KMDVF 295

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
             TT++ G C  G + KA +LF +   + + P  VTY  LI G       +E   L  +M
Sbjct: 296 LATTLMQGYCLHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQM 355

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++QG+ P+   FN+++  L +N + ++A  L +L++  GV P+ F Y  L+       +V
Sbjct: 356 IEQGLLPSTYEFNLVIKGLLRNKQWEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKV 414

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L+  M+  G K ++ +   L+ GYC+   ++ AL LYSEM  KG  P+ V Y TL
Sbjct: 415 HEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTL 474

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +    ++A+ L +EM ++GV+   + Y   I+GLC    + E  E+ +      +
Sbjct: 475 MKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGF 534

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
                 YN +I+G  K+G +  A  ++R +    +  ++VTY   I   C     D A  
Sbjct: 535 VPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVK 594

Query: 362 LFLDME 367
           L + M 
Sbjct: 595 LLIYMR 600



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/313 (30%), Positives = 143/313 (45%), Gaps = 47/313 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A AL  ++   G     +TYN LINGLC            +EM       G V  P T+
Sbjct: 486 KAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEV----DEMLKRFVSEGFV--PTTM 539

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +II+G  K G +  A  ++ +M ++ I PN+VTY S I G+C  N  + A  L I M
Sbjct: 540 TYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYM 599

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN------------ 169
              G+ P++ ++N  +N  CK G M  A   L L+++ G+ PN  VYN            
Sbjct: 600 RCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMM 659

Query: 170 -----------------------TLMDGFCLTGRVNRAEELFVSMESMGCKHNVF---SY 203
                                  TL+DGF   G V  A EL+  M +    HN+    ++
Sbjct: 660 AEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLA---NHNIPDDKTF 716

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           + L +G C++ +I+GA  L  +M    + P+ V YN L        +++ AF+L D+M  
Sbjct: 717 TALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLS 776

Query: 264 HGVAADTWAYRTF 276
            GV  D   Y  F
Sbjct: 777 SGVVPDDTTYNIF 789



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 147/318 (46%), Gaps = 4/318 (1%)

Query: 53  GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN 112
           GVV  P+  + T ++    +      A  LF +M+ +    +   Y+ ++          
Sbjct: 148 GVV--PDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRMHG 205

Query: 113 EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           +A  LF EM   GV+P+   + + +  LCK    D A ++L  M + G++P  F YN+++
Sbjct: 206 DAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYNSVV 265

Query: 173 DGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           D     GR++ A  L   M  + G K +VF  + L+ GYC + EI  AL L+ E +  G+
Sbjct: 266 DVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDEAVRDGV 325

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P  V Y  L  G       +  +KL  +M   G+   T+ +   I GL +N    +A+ 
Sbjct: 326 TPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQWEDAIA 385

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           LF  L +     D+  Y CLI  L K  ++  A  L+  +    +   +VT + ++   C
Sbjct: 386 LF-DLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYC 444

Query: 352 ADGKMDKARDLFLDMEAK 369
             G MD+A  L+ +M  K
Sbjct: 445 EKGCMDEALKLYSEMPGK 462



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 5/249 (2%)

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           +  M+ +GV P+  S   ++    +     +A  L + M   G   +A +Y+ +M   C+
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CV 199

Query: 178 TGRVN-RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
            GR++  A  LF  M   G K +   Y+I I G CK ++ + A+ +  +M   G+KP   
Sbjct: 200 VGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDF 259

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-R 294
            YN++   L ++ +++ A +L D+M    G   D +   T + G C +G I +A++LF  
Sbjct: 260 TYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDE 319

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +R      ++  Y  LI G    G     ++L R +    L+     +N++I  L  + 
Sbjct: 320 AVRDGVTPTNV-TYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNK 378

Query: 355 KMDKARDLF 363
           + + A  LF
Sbjct: 379 QWEDAIALF 387


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  187 bits (475), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 106/349 (30%), Positives = 184/349 (52%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V     L+NG C+ G    A  +F+EM       G+   PN VTYT ++ G    G  +
Sbjct: 37  DVTACTALVNGCCKGGDVAEARRVFDEMP----LLGLA--PNEVTYTALMHGYFTHGQRE 90

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K   LF +M+   + PN+ TYN LI  +C   ++  A+ LF EM  +G+  NVVS+N ++
Sbjct: 91  KGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLI 150

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC++GK+ +A++LL++M   G RP+   +N L+DG+   G+++ A   F  M++ G +
Sbjct: 151 AGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQ 210

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  +Y++LI G+C+ +++  A    S+M  +G++P  V Y  L       + + +AF++
Sbjct: 211 PSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEI 270

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
              M++ G+  D   Y   +  LC  G + +A +LF+++     E     Y+ +I G  +
Sbjct: 271 LAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGR 330

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G    A +L   + +  LI +  +Y + I  LC D K  +A  L  DM
Sbjct: 331 EGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 176/350 (50%), Gaps = 7/350 (2%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T    +  LC  G    AL +       +G+  +    +    T +++G CK G V +A+
Sbjct: 4   TTAAAVRRLCAAGDVRSALAMLAR-GTKSGDAAL----DVTACTALVNGCCKGGDVAEAR 58

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            +F +M    + PN VTY +L+HG+       +   LF EM   GV+PN+ ++N ++ E 
Sbjct: 59  RVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEW 118

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+ G+ + A  L + M   G+  N   YNTL+ G C  G++  A +L   M + G + ++
Sbjct: 119 CRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSI 178

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            ++++L++GY K  ++  AL  +++M + G +P  V YN L  G      + RA +   +
Sbjct: 179 ITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSD 238

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+  G+      Y   ID   +  ++ +A E+   +     E+D   Y  L+  LC  G 
Sbjct: 239 MKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGN 298

Query: 321 LKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +K A +LF+S+  +GV  ++V+ Y++MI+    +G   KA  L ++M  K
Sbjct: 299 MKDARKLFQSMGEKGVEPSNVI-YDMMIYGYGREGSSYKALKLIMEMRQK 347



 Score =  167 bits (423), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 6/289 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ALF ++R  G EPN++TYN LI   CRTG    A +LF+EM       G+V   N V+Y 
Sbjct: 94  ALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMP----VRGIV--RNVVSYN 147

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I GLC+ G +  A +L   M+ E   P+++T+N L+ G+  A   + A   F +M   
Sbjct: 148 TLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAA 207

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G QP+ V++N+++   C+   M  A+R L  M + G+ P    Y  L+D F     + +A
Sbjct: 208 GFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKA 267

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
            E+   ME  G + +  +Y +L+   C    ++ A  L+  M  KG++P  VIY+ +  G
Sbjct: 268 FEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYG 327

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
                   +A KL  EM++ G+  ++ +Y   I  LCK+    EA  L 
Sbjct: 328 YGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALL 376



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 156/336 (46%), Gaps = 8/336 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F ++ + G  PN  TY  L++G    G       LFEEM  G  E      PN  
Sbjct: 56  EARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVE------PNLY 109

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC-YANDWNEAKCLFIE 120
           TY  +I   C+ G  ++A+ LF +M    I  NVV+YN+LI G C +   W+ AK L + 
Sbjct: 110 TYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDM- 168

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G +P++++FN++++   K GKM  A      M   G +P+A  YN L+ GFC    
Sbjct: 169 MRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARD 228

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + RA      M+  G +    +Y+ILI+ + +   +  A  + + M   G++ D   Y  
Sbjct: 229 MTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGV 288

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L     ++ A KLF  M   GV      Y   I G  + G   +A++L   +R   
Sbjct: 289 LVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKG 348

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
              +  +Y   I  LCK  + + A  L   + R  L
Sbjct: 349 LIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGL 384


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/349 (30%), Positives = 183/349 (52%), Gaps = 6/349 (1%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V     L++G CR+G    A  +F+ M       G+   PN VT+T +I G    G  +
Sbjct: 37  DVAACTALVHGYCRSGDVAEAQRVFDVMP----RLGLT--PNEVTFTALIHGYFIHGRRE 90

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           K   LF KM+   I PN+ TYN L+  +C   ++  A+ LF EM  +G+  NVVS+N ++
Sbjct: 91  KGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLI 150

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
             LC+  KM +A++LLELM + G+RP+   +N L+DG+   G+++ A      M   G +
Sbjct: 151 AGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQ 210

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            +  +Y+ LI G+C+ +++  A   +S+M  +G+ P  V Y  L       + +++AF++
Sbjct: 211 PSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEM 270

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F  M++ G+  D   Y   +  LC  G + +A +LF+++     ++    Y+ LI G  +
Sbjct: 271 FAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGR 330

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            G    A +L   + +   + +  +Y + I  LC DGK  +A  L  DM
Sbjct: 331 EGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDM 379



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 162/307 (52%), Gaps = 2/307 (0%)

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           T ++ G C+ G V +A+ +F  M    + PN VT+ +LIHG+       +   LF +M  
Sbjct: 42  TALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRI 101

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G++PN+ ++N+++ E C+ G+ + A  L E M   G+  N   YNTL+ G C   ++  
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKD 161

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A +L   M   G + +V ++++L++GY K  ++  AL   ++M   G +P  V YN L  
Sbjct: 162 ATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIA 221

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G      + RA + F +M+  G+A     Y   ID   +   + +A E+F  +     E+
Sbjct: 222 GFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEV 281

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           D+R Y  L+  LC  G +K A +LF+S+  +G+ + +V+ Y+++I+    +G   KA  L
Sbjct: 282 DVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVI-YDMLIYGYGREGSSYKAMKL 340

Query: 363 FLDMEAK 369
            ++M  K
Sbjct: 341 IMEMRKK 347



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 6/353 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  +   G  PN  T+  LI+G    G     L LFE+M  G  E      PN  
Sbjct: 56  EAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIE------PNLY 109

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++   C+ G  ++A+ LF +M  + I  NVV+YN+LI G C      +A  L   M
Sbjct: 110 TYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELM 169

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G++P+VV+FN++++   K GKM  A      M   G +P+A  YN L+ GFC    +
Sbjct: 170 RREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDM 229

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA   F  M+  G      +Y+ILI+ + +  +++ A  +++ M   G++ DV  Y  L
Sbjct: 230 IRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVL 289

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L     ++ A KLF  +   G+      Y   I G  + G   +A++L   +R   +
Sbjct: 290 VHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGF 349

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
             +  +Y   I  LC  G+   A  L   + R  +        ++++A    G
Sbjct: 350 VPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQG 402



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 126/239 (52%)

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +V +   +++  C++G + EA R+ ++M ++G+ PN   +  L+ G+ + GR  +   LF
Sbjct: 37  DVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALF 96

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
             M   G + N+++Y+IL+  +C+  E E A  L+ EM +KGI  +VV YNTL  GL   
Sbjct: 97  EKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRY 156

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +++ A +L + M+R G+      +   +DG  K G +  A+     +R+  Y+     Y
Sbjct: 157 RKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTY 216

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           N LI G C++  +  A   F  +    L    VTY I+I A   +  MDKA ++F  ME
Sbjct: 217 NALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGME 275



 Score = 51.2 bits (121), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)

Query: 250 QVERAFKLFDEMQRHG-VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
           +V  A  L     + G    D  A    + G C++G + EA  +F  +  L    +   +
Sbjct: 17  EVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTF 76

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             LI G    GR +    LF  +  G +  ++ TYNI++   C  G+ ++AR LF +M A
Sbjct: 77  TALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPA 136

Query: 369 K 369
           K
Sbjct: 137 K 137


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 180/368 (48%), Gaps = 5/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +   +  +G EP++ TYN L  GLC+ G    A  L +EM       G    P+ V
Sbjct: 296 QATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMER----LGTAL-PDVV 350

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T++D   K      A  L  +M+D+ + P +VT+N ++   C      EA     ++
Sbjct: 351 TYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKI 410

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G+ P+V+++N +++  CK G + +A  L++ M+  G++ + F  NT++   C   R 
Sbjct: 411 AEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRY 470

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AEEL  S    G   +  SY  ++  Y K    E AL L+ +M+ + + P +  YNTL
Sbjct: 471 EDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTL 530

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL  + +++ A    +E    G+  D   Y   I   CK G +  A      +    +
Sbjct: 531 IKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSF 590

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+   N L++GLC  G+L  A +LF S        DV+TYN +I ++C  G +D A  
Sbjct: 591 KPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALH 650

Query: 362 LFLDMEAK 369
            F DME K
Sbjct: 651 FFDDMEVK 658



 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 178/398 (44%), Gaps = 42/398 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A    ++ FG  P+  TYNTL+N  CR G    A  L   M       G+   P   
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRD----GIA--PTQP 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA------- 114
           TY T++    + G++ +A ++   M      P++ TYN L  G C A   +EA       
Sbjct: 280 TYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEM 339

Query: 115 -----------------------KC------LFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                                  +C      L  EM D+GV+P +V+ N+++  LCK GK
Sbjct: 340 ERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGK 399

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           ++EA   LE + + G+ P+   YNTL+D +C  G V +A  L   M   G K + F+ + 
Sbjct: 400 LEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNT 459

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           ++   CK K  E A  L      +G  PD V Y T+    F+ +  E A +L+D+M    
Sbjct: 460 VLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERK 519

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +      Y T I GLC+   + EA++            D   YN +I   CK G L+ A+
Sbjct: 520 LIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAF 579

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
                +       DVVT N +++ LC  GK+DKA  LF
Sbjct: 580 RFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617



 Score =  177 bits (449), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 119/391 (30%), Positives = 184/391 (47%), Gaps = 44/391 (11%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F  L      PN +T+N L++  C  G    AL     M      FG+   P+ VTY T
Sbjct: 195 VFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQG----FGL--SPDAVTYNT 248

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +++  C++G + +A+ L  +MK + I P   TYN+L+  F       +A  +   M   G
Sbjct: 249 LLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYG 308

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR-PNAFVYNTLMDGFCLTGRVNR- 183
            +P++ ++NV+   LC+ GK+DEA RL + M ++G   P+   YNTL+D  C   R +  
Sbjct: 309 FEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDA-CFKWRCSSD 367

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L   M   G K  + +++I++   CK  ++E AL    ++  +G+ PDV+ YNTL  
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT-------- 295
              +   V +AF L DEM   G+  DT+   T +  LCK     +A EL  +        
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 296 ---------------------LRILKYELD------IRAYNCLIDGLCKSGRLKIAWELF 328
                                LR+    ++      I  YN LI GLC+  RLK A +  
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
                  L+ D  TYNI+IHA C +G ++ A
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENA 578



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 195/440 (44%), Gaps = 91/440 (20%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA AL  +++  G  P   TYNTL++   R G    A  + E M      +G   +P+  
Sbjct: 261 EARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMT----AYGF--EPDLR 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDE-----NINPNVVTYNSLIHGFCYANDW---NE 113
           TY  +  GLC+ G VD+A     ++KDE        P+VVTYN+L+   C+   W   ++
Sbjct: 315 TYNVLAMGLCQAGKVDEA----FRLKDEMERLGTALPDVVTYNTLVDA-CF--KWRCSSD 367

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A  L  EM D+GV+P +V+ N+++  LCK GK++EA   LE + + G+ P+   YNTL+D
Sbjct: 368 ALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLID 427

Query: 174 GFCLTGRVNRA-----------------------------------EELFVSMESMGCKH 198
            +C  G V +A                                   EEL  S    G   
Sbjct: 428 AYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVP 487

Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
           +  SY  ++  Y K    E AL L+ +M+ + + P +  YNTL  GL  + +++ A    
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 259 DEMQRHGVAADTWAYR-----------------------------------TFIDGLCKN 283
           +E    G+  D   Y                                    T ++GLC +
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G + +A++LF +      ++D+  YN LI  +CK G +  A   F  +    L  D  TY
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667

Query: 344 NIMIHALCADGKMDKARDLF 363
           N+++ AL   G+ ++A ++ 
Sbjct: 668 NVVLSALSEAGRSEEAHNML 687



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 163/330 (49%), Gaps = 6/330 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  G +P + T+N ++  LC+ G    AL   E++A    E G+   P+ +
Sbjct: 367 DALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIA----EEGLA--PDVI 420

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+ID  CK G V KA  L  +M  + +  +  T N++++  C    + +A+ L    
Sbjct: 421 TYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSP 480

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G  P+ VS+  +M    K    + A RL + MI+  + P+   YNTL+ G C   R+
Sbjct: 481 PQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERL 540

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +        G   +  +Y+I+I+ YCK  ++E A   +++M+    KPDVV  NTL
Sbjct: 541 KEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTL 600

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++++A KLF+     G   D   Y T I  +CK G +  A+  F  + +   
Sbjct: 601 MNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGL 660

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           + D   YN ++  L ++GR + A  +   L
Sbjct: 661 QPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 169/351 (48%), Gaps = 10/351 (2%)

Query: 3   AAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTI--VALNLFEEMANGNGEFGVVCKPN 59
           AA L   LR   G  P++   N +++ L R+  T+   +L++F  +        +   PN
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL------IELRLHPN 207

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             T+  ++   C +G +  A      M+   ++P+ VTYN+L++  C      EA+ L  
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M   G+ P   ++N +++   + G + +A++++E M   G  P+   YN L  G C  G
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAG 327

Query: 180 RVNRAEELFVSMESMGCK-HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           +V+ A  L   ME +G    +V +Y+ L++   K +    AL L  EM  KG+KP +V +
Sbjct: 328 KVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           N +   L +  ++E A    +++   G+A D   Y T ID  CK G + +A  L   +  
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
              ++D    N ++  LCK  R + A EL  S P+   + D V+Y  ++ A
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 173/379 (45%), Gaps = 30/379 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV------- 54
           EA     K+   G  P+V TYNTLI+  C+ G+   A  L +EM     +          
Sbjct: 402 EALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVL 461

Query: 55  --VCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
             +CK                    P+ V+Y T++    KE   + A  L+ +M +  + 
Sbjct: 462 YNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLI 521

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++ TYN+LI G C      EA     E +++G+ P+  ++N+I++  CK G ++ A R 
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRF 581

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
              M++   +P+    NTLM+G CL G++++A +LF S    G K +V +Y+ LI   CK
Sbjct: 582 HNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCK 641

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ AL  + +M  KG++PD   YN +   L E  + E A  +  ++   G  + ++A
Sbjct: 642 VGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFA 701

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELD-IRAYNCLIDGLCKSGRLKIAWELFRSL 331
                        + E           K + + +  Y   ++GLC  G+LK A  +   +
Sbjct: 702 CPLLKPSSADEADVKEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEM 761

Query: 332 PRGVLIADVVTYNIMIHAL 350
            +  +  D  TY  ++  L
Sbjct: 762 MQKGMPVDCSTYITLMEGL 780



 Score =  140 bits (354), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 146/310 (47%), Gaps = 3/310 (0%)

Query: 57  KPNTVTYTTIIDGLCKEG--FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           +P+      ++  L +        + ++F  + +  ++PN  T+N L+H  C      +A
Sbjct: 168 RPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADA 227

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
                 M   G+ P+ V++N ++N  C+ G + EA  LL  M + G+ P    YNTL+  
Sbjct: 228 LATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSA 287

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK-P 233
           F   G + +A ++  SM + G + ++ +Y++L  G C+  +++ A  L  EM   G   P
Sbjct: 288 FARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALP 347

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           DVV YNTL    F+      A +L +EM+  GV      +   +  LCK G + EA+   
Sbjct: 348 DVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKL 407

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
             +       D+  YN LID  CK+G +  A+ L   +    L  D  T N +++ LC  
Sbjct: 408 EKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKM 467

Query: 354 GKMDKARDLF 363
            + + A +L 
Sbjct: 468 KRYEDAEELL 477



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 137/286 (47%), Gaps = 3/286 (1%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCL--FIEMMDQGVQPNVVSFNVIMNELCKNG 144
           +   + P++   N+++     +        L  F  +++  + PN  +FN++++  C  G
Sbjct: 163 RRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKG 222

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            + +A   L  M   G+ P+A  YNTL++  C  G +  A  L   M+  G      +Y+
Sbjct: 223 TLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYN 282

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            L++ + +   I+ A  +   M + G +PD+  YN L +GL +  +V+ AF+L DEM+R 
Sbjct: 283 TLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERL 342

Query: 265 GVA-ADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
           G A  D   Y T +D   K     +A+ L   +R    +  +  +N ++  LCK G+L+ 
Sbjct: 343 GTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEE 402

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A      +    L  DV+TYN +I A C  G + KA  L  +M  K
Sbjct: 403 ALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGK 448



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 11/269 (4%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P++ TYNTLI GLCR      A++   E      E G+V  P+  TY  II   CKEG +
Sbjct: 522 PSISTYNTLIKGLCRMERLKEAIDKLNEFV----EKGLV--PDETTYNIIIHAYCKEGDL 575

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           + A     KM + +  P+VVT N+L++G C     ++A  LF   +++G + +V+++N +
Sbjct: 576 ENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTL 635

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  +CK G +D A    + M   G++P+AF YN ++      GR   A  +   +   G 
Sbjct: 636 IQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGK 695

Query: 197 KHNVFSYSILINGYCKN---KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
               F+  +L          KE EG     +E   K     +  Y     GL    Q++ 
Sbjct: 696 LSQSFACPLLKPSSADEADVKEHEGKPE--AESSEKAQDNALETYMERLNGLCTGGQLKE 753

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           A  + DEM + G+  D   Y T ++GL K
Sbjct: 754 AKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 62/143 (43%), Gaps = 13/143 (9%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-GNGEFGVVC---KPNTVT 62
           F  + V G +P+ FTYN +++ L   G +  A N+  ++A+ G       C   KP++  
Sbjct: 652 FDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSAD 711

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              +     KE       E   K +D  +     TY   ++G C      EAK +  EMM
Sbjct: 712 EADV-----KEHEGKPEAESSEKAQDNALE----TYMERLNGLCTGGQLKEAKAVLDEMM 762

Query: 123 DQGVQPNVVSFNVIMNELCKNGK 145
            +G+  +  ++  +M  L K  K
Sbjct: 763 QKGMPVDCSTYITLMEGLIKRQK 785


>gi|168034142|ref|XP_001769572.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162679114|gb|EDQ65565.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 871

 Score =  187 bits (474), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 189/354 (53%), Gaps = 9/354 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           +F + +  G   NV+ Y+ +++   R+G    AL +F+ M          CKPN +TY T
Sbjct: 221 VFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAG------CKPNLITYNT 274

Query: 66  IIDGLCKEGFVD--KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           IID  C +G VD  KA ++F +M+ E + P+ +T+NSLI      + W +++ +F EM  
Sbjct: 275 IIDA-CGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQR 333

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +G++ ++ ++N +++ +CK G+M+ A+ ++  M    + PN   Y+T++DG+   G    
Sbjct: 334 RGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEE 393

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A  L+  M+  G + +  SY+ LI+ Y K    + AL+   +M   G+K DVV YN L  
Sbjct: 394 AIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALID 453

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
              +  + + A  LFD+M+  G+  +   Y   ID   K G   +A  +F   +    + 
Sbjct: 454 AYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEFKRAGLKP 513

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           D+  Y+ LID  CK G ++ A  L + + +  +  ++VTYN +I A   +G++D
Sbjct: 514 DVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQVD 567



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/322 (31%), Positives = 167/322 (51%), Gaps = 32/322 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGE--------F 52
           EA  +F  ++  GC+PN+ TYNT+I+   + G  +  AL++FEEM     E         
Sbjct: 252 EALKVFQAMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSL 311

Query: 53  GVVCKPNTV---------------------TYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
             VC   ++                     TY T+ID +CK G ++ A  +   M+ +NI
Sbjct: 312 IAVCSRGSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNI 371

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           +PNVVTY+++I G+     + EA  L+ +M + GV+P+ VS+N +++   K G+ D+A  
Sbjct: 372 SPNVVTYSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALT 431

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
             + M ++G++ +   YN L+D +   G+   A  LF  M++ G   NV +YS LI+ Y 
Sbjct: 432 ACKDMERVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYS 491

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K    + A S++ E    G+KPDVV+Y++L     +   VE A  L  EM + G+  +  
Sbjct: 492 KAGMHQDATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIV 551

Query: 272 AYRTFIDGLCKNGYI--VEAVE 291
            Y + ID   +NG +  VEA +
Sbjct: 552 TYNSLIDAYGRNGQVDNVEAAK 573



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 170/344 (49%), Gaps = 9/344 (2%)

Query: 25  LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFL 84
           +I+ L R G   +AL++F         FG     N   Y+ ++    + G   +A ++F 
Sbjct: 205 MISTLGRLGKVEIALDVFNRAQKAG--FG----NNVYAYSAMVSAYGRSGRCREALKVFQ 258

Query: 85  KMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN 143
            MK     PN++TYN++I        D  +A  +F EM  +GV+P+ ++FN ++  +C  
Sbjct: 259 AMKKAGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVCSR 317

Query: 144 GKM-DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
           G + +++ R+   M + G+  + F YNTL+D  C  G++  A  +  SM       NV +
Sbjct: 318 GSLWEDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVT 377

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           YS +I+GY K    E A+ LY +M   G++PD V YNTL     ++ + + A     +M+
Sbjct: 378 YSTMIDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDME 437

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           R G+ AD   Y   ID   K G   +A  LF  ++      ++  Y+ LID   K+G  +
Sbjct: 438 RVGLKADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQ 497

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            A  +F    R  L  DVV Y+ +I + C  G ++ A  L  +M
Sbjct: 498 DATSIFVEFKRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEM 541



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 158/306 (51%), Gaps = 3/306 (0%)

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           + +I  L + G V+ A ++F + +      NV  Y++++  +  +    EA  +F  M  
Sbjct: 203 SIMISTLGRLGKVEIALDVFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKK 262

Query: 124 QGVQPNVVSFNVIMNELCKNG-KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV- 181
            G +PN++++N I++   K G  + +A  + E M + GV P+   +N+L+   C  G + 
Sbjct: 263 AGCKPNLITYNTIIDACGKGGVDLKKALDIFEEMQKEGVEPDRITFNSLI-AVCSRGSLW 321

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             ++ +F  M+  G + ++F+Y+ LI+  CK  ++E A S+ S M  K I P+VV Y+T+
Sbjct: 322 EDSQRVFAEMQRRGIEQDIFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTM 381

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++   E A  L+ +M+  GV  D  +Y T ID   K G   +A+   + +  +  
Sbjct: 382 IDGYGKLGCFEEAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGL 441

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + D+  YN LID   K G+ K A  LF  +    L+ +V+TY+ +I A    G    A  
Sbjct: 442 KADVVTYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATS 501

Query: 362 LFLDME 367
           +F++ +
Sbjct: 502 IFVEFK 507



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 167/342 (48%), Gaps = 21/342 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L+  ++  G  P+  +YNTLI+   + G    AL   ++M        V  K + V
Sbjct: 393 EAIGLYHDMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMER------VGLKADVV 446

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID   K+G    A  LF KMK E + PNV+TY++LI  +  A    +A  +F+E 
Sbjct: 447 TYNALIDAYGKQGKYKDAAGLFDKMKAEGLVPNVLTYSALIDAYSKAGMHQDATSIFVEF 506

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++P+VV ++ +++  CK G +++A  LL+ M Q G++PN   YN+L+D +   G+V
Sbjct: 507 KRAGLKPDVVLYSSLIDSCCKCGLVEDAVVLLQEMTQAGIQPNIVTYNSLIDAYGRNGQV 566

Query: 182 NRAEELFVSME-----SMGCKHNVFSYSILINGYCKNKE--IEGALSLYSEMLSKGIKPD 234
           +  E    +M       +G +        L +    N    +  A+S++ EM   G+KP+
Sbjct: 567 DNVEAAKGNMPINVFNKVGDRSTEIICKTLTSQQNANDHTGVLAAVSVFHEMQQFGLKPN 626

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY---RTFIDGLCKNGYIVEAVE 291
           VV ++ +         ++ A  L ++M+      D+W Y      + GL ++ + VEA  
Sbjct: 627 VVTFSAILNACSRCSSLQEASVLLEQMRFF----DSWVYGIAHGLLMGLREHVW-VEAQR 681

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
           LF  +  + Y      YN L D L   G+ + A E+  +  R
Sbjct: 682 LFDEIARMDYATGAAFYNALTDVLWHFGQRQGAQEVVVAAKR 723



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 129/255 (50%), Gaps = 3/255 (1%)

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
           +F      G   NV +++ +++   ++G+  EA ++ + M + G +PN   YNT++D  C
Sbjct: 221 VFNRAQKAGFGNNVYAYSAMVSAYGRSGRCREALKVFQAMKKAGCKPNLITYNTIIDA-C 279

Query: 177 LTGRVN--RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
             G V+  +A ++F  M+  G + +  +++ LI    +    E +  +++EM  +GI+ D
Sbjct: 280 GKGGVDLKKALDIFEEMQKEGVEPDRITFNSLIAVCSRGSLWEDSQRVFAEMQRRGIEQD 339

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +  YNTL   + +  Q+E A  +   M+   ++ +   Y T IDG  K G   EA+ L+ 
Sbjct: 340 IFTYNTLIDAVCKGGQMELAASIMSSMRLKNISPNVVTYSTMIDGYGKLGCFEEAIGLYH 399

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            ++      D  +YN LID   K GR   A    + + R  L ADVVTYN +I A    G
Sbjct: 400 DMKESGVRPDRVSYNTLIDIYAKLGRFDDALTACKDMERVGLKADVVTYNALIDAYGKQG 459

Query: 355 KMDKARDLFLDMEAK 369
           K   A  LF  M+A+
Sbjct: 460 KYKDAAGLFDKMKAE 474


>gi|334182978|ref|NP_001185123.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|332193283|gb|AEE31404.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 811

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 188/373 (50%), Gaps = 47/373 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  ++ ++   G EP++ TY++LI+G C+ G+      L+E+M        +   P+ V
Sbjct: 409 EAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK------MGYPPDVV 462

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  ++DGL K+G +  A    +KM  ++I  NVV +NSLI G+C  N ++EA  +F  M
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLM 522

Query: 122 MDQGVQPNVVSF-----------------------------------------NVIMNEL 140
              G++P+V +F                                         NV+++ L
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 582

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            K  ++++AS+    +I+  + P+   YNT++ G+C   R++ AE +F  ++      N 
Sbjct: 583 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 642

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
            + +ILI+  CKN +++GA+ ++S M  KG KP+ V Y  L     +   +E +FKLF+E
Sbjct: 643 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 702

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           MQ  G++    +Y   IDGLCK G + EA  +F      K   D+ AY  LI G CK GR
Sbjct: 703 MQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGR 762

Query: 321 LKIAWELFRSLPR 333
           L  A  L+  + R
Sbjct: 763 LVEAALLYEHMLR 775



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 92/312 (29%), Positives = 162/312 (51%), Gaps = 6/312 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN VT+ T+I+G CK G +D+A +LF  M+   I P+++ Y++LI G+  A        L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F + + +GV+ +VV F+  ++   K+G +  AS + + M+  G+ PN   Y  L+ G C 
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            GR+  A  ++  +   G + ++ +YS LI+G+CK   +    +LY +M+  G  PDVVI
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVI 463

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  GL +   +  A +   +M    +  +   + + IDG C+     EA+++FR + 
Sbjct: 464 YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMG 523

Query: 298 ILKYELDIRAYNCLI------DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           I   + D+  +  ++      D  CK  +  I  +LF  + R  + AD+   N++IH L 
Sbjct: 524 IYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLF 583

Query: 352 ADGKMDKARDLF 363
              +++ A   F
Sbjct: 584 KCHRIEDASKFF 595



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 198/432 (45%), Gaps = 70/432 (16%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
            A  LF  +   G EP++  Y+TLI+G  + G   +   LF +  +   +  VV      
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363

Query: 57  ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                    PN VTYT +I GLC++G + +A  ++ ++    + 
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P++VTY+SLI GFC   +      L+ +M+  G  P+VV + V+++ L K G M  A R 
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY------SIL 206
              M+   +R N  V+N+L+DG+C   R + A ++F  M   G K +V ++      SI+
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
            + +CK+ +    L L+  M    I  D+ + N +   LF+ H++E A K F+ +    +
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 603

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY------------------ELD--IR 306
             D   Y T I G C    + EA  +F  L++  +                  ++D  IR
Sbjct: 604 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIR 663

Query: 307 ---------------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
                           Y CL+D   KS  ++ +++LF  +    +   +V+Y+I+I  LC
Sbjct: 664 MFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLC 723

Query: 352 ADGKMDKARDLF 363
             G++D+A ++F
Sbjct: 724 KRGRVDEATNIF 735



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/367 (26%), Positives = 177/367 (48%), Gaps = 14/367 (3%)

Query: 4   AALFMKLRVFGCEPN-VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  F KL   G EP+ V  +  +++ L   G    AL+    +       G+V      +
Sbjct: 201 ADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIV------S 254

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              ++ GL  +  ++ A  L   + D    PNVVT+ +LI+GFC   + + A  LF  M 
Sbjct: 255 CNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVME 313

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G++P++++++ +++   K G +    +L    +  GV+ +  V+++ +D +  +G + 
Sbjct: 314 QRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLA 373

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  ++  M   G   NV +Y+ILI G C++  I  A  +Y ++L +G++P +V Y++L 
Sbjct: 374 TASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLI 433

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  +   +   F L+++M + G   D   Y   +DGL K G ++ A+     +      
Sbjct: 434 DGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIR 493

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY------NIMIHALCADGKM 356
           L++  +N LIDG C+  R   A ++FR +    +  DV T+      +IM  A C   K 
Sbjct: 494 LNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKP 553

Query: 357 DKARDLF 363
                LF
Sbjct: 554 TIGLQLF 560



 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 141/281 (50%), Gaps = 12/281 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLI------NGLCRTGHTIVALNLFEEMANGNGEFGVV 55
           EA  +F  + ++G +P+V T+ T++      +  C+     + L LF+ M          
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK------ 567

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
              +      +I  L K   ++ A + F  + +  + P++VTYN++I G+C     +EA+
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
            +F  +      PN V+  ++++ LCKN  MD A R+  +M + G +PNA  Y  LMD F
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
             +  +  + +LF  M+  G   ++ SYSI+I+G CK   ++ A +++ + +   + PDV
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDV 747

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           V Y  L  G  ++ ++  A  L++ M R+GV  D    R  
Sbjct: 748 VAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRAL 788



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/372 (24%), Positives = 172/372 (46%), Gaps = 11/372 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG-EFGVVCKPNT 60
            A   F    + G +P+ +T   + + L R G   VA  +F+EM    G +F V+     
Sbjct: 85  SALKYFRWAEISGKDPSFYT---IAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRD 141

Query: 61  VTYTT-----IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
            +        +++  C+ G VDKA E+F+      +     +   +++    ++  +   
Sbjct: 142 RSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIA 201

Query: 116 CLFIEMMDQGVQPNVVS-FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             F ++   G++P+ VS    +++ L   G++ +A     L+++ G R      N ++ G
Sbjct: 202 DHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG 261

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
             +  ++  A  L   +   G   NV ++  LING+CK  E++ A  L+  M  +GI+PD
Sbjct: 262 LSVD-QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPD 320

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           ++ Y+TL  G F+   +    KLF +    GV  D   + + ID   K+G +  A  +++
Sbjct: 321 LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYK 380

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +       ++  Y  LI GLC+ GR+  A+ ++  + +  +   +VTY+ +I   C  G
Sbjct: 381 RMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCG 440

Query: 355 KMDKARDLFLDM 366
            +     L+ DM
Sbjct: 441 NLRSGFALYEDM 452



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 57/250 (22%), Positives = 102/250 (40%), Gaps = 47/250 (18%)

Query: 132 SFNVIMNELCKNGKMDEASRLLELMI-----------QIGVRP-NAFVYNTLMDGFCLTG 179
           SF  I + L +NG  D A ++ + MI            I  R  +A V   LM+  C  G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            V++A E+FV    +G      S   ++N    +  ++     + ++   GI+P      
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPS----- 215

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                                    GV+A  +     +D L   G + +A++  R +   
Sbjct: 216 -------------------------GVSAHGFV----LDALFCKGEVTKALDFHRLVMER 246

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            + + I + N ++ GL    ++++A  L   +       +VVT+  +I+  C  G+MD+A
Sbjct: 247 GFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305

Query: 360 RDLFLDMEAK 369
            DLF  ME +
Sbjct: 306 FDLFKVMEQR 315


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/380 (31%), Positives = 184/380 (48%), Gaps = 23/380 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  +R F C P+V+TYN +++ L +    ++AL ++  M   N      C PN  
Sbjct: 144 KAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLN------CLPNVA 197

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T++ +IDGLCK G V  A  LF +M    I P+  TY  +I G C +   ++A  LF +M
Sbjct: 198 TFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKM 257

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D GV P+ V+ N ++N  C   ++DEA  LL L  + G   +   Y+ L+ G     R 
Sbjct: 258 KDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRY 317

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              + L+  M     K +V+ Y+I++ G  +  ++  AL L +EM   G+ PD V YN L
Sbjct: 318 EDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVL 377

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  +  A  L  E+ RH    +   Y   I G+C+NG   +A E+F  +  L  
Sbjct: 378 IKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGC 437

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL---------------PRGVLIADVVTYNIM 346
                 +N LIDGLCK+G+L+ A  LF  +               P  VL  D  +   M
Sbjct: 438 YPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL--DSASLQKM 495

Query: 347 IHALCADGKMDKARDLFLDM 366
           +  LC  G + KA  + + +
Sbjct: 496 VEQLCDSGLIHKAYRILMQL 515



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/411 (28%), Positives = 197/411 (47%), Gaps = 55/411 (13%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +   L+ K+     +P+V+ Y  ++ GL   G    AL L  EM     E GVV  P+TV
Sbjct: 319 DVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMT----ESGVV--PDTV 372

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  +I G C  G + +A+ L L++   +  PNV TY+ LI G C      +A+ +F EM
Sbjct: 373 CYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEM 432

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV-------------- 167
              G  P+ V+FN +++ LCK G++++A  LL   ++IG  P+ F+              
Sbjct: 433 EKLGCYPSAVTFNSLIDGLCKTGQLEKA-HLLFYKMEIGRNPSLFLRLSQGPSHVLDSAS 491

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
              +++  C +G +++A  + + +   G    +++Y+IL+NG+CK     GA  L+ EM 
Sbjct: 492 LQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQ 551

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            KG+ PD V Y TL  GL    + E A+K+FD+M+++G   D   YRT +  +C+   + 
Sbjct: 552 FKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELP 611

Query: 288 EAVELF----RTLRILKYE------------------------------LDIRAYNCLID 313
            A  L+    R +R  + E                               D+  Y   + 
Sbjct: 612 RAFSLWLKYLRNIRSQEDEAIKAIEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLI 671

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           GLC++ R+  A ++F  L    ++        +I+ L  +G +D+A D+FL
Sbjct: 672 GLCQTRRVGEALKIFLILEEYKVVITPPCCVKLIYFLLKEGDLDRAIDVFL 722



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/333 (31%), Positives = 159/333 (47%), Gaps = 39/333 (11%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           K G  DKA E F  M+D +  P+V TYN ++      N    A  ++  MM     PNV 
Sbjct: 138 KMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVA 197

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY----------------------- 168
           +F+++++ LCK+G + +A  L + M Q G+ P+AF Y                       
Sbjct: 198 TFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKM 257

Query: 169 ------------NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
                       N L++GFC+  RV+ A  L    E  G   +V  YS LI G  + K  
Sbjct: 258 KDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRY 317

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           E    LY +M+   +KPDV +Y  +  GL E  +V  A +L +EM   GV  DT  Y   
Sbjct: 318 EDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVL 377

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
           I G C  G + EA  L   L I +++   +++ Y+ LI G+C++G  + A E+F  + + 
Sbjct: 378 IKGFCDMGLLSEARSL--QLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKL 435

Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
                 VT+N +I  LC  G+++KA  LF  ME
Sbjct: 436 GCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKME 468



 Score =  124 bits (311), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 78/255 (30%), Positives = 126/255 (49%), Gaps = 1/255 (0%)

Query: 113 EAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           E  C  +E + + G++ +  +F V++    K G  D+A      M      P+ + YN +
Sbjct: 108 ELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMI 167

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +D       +  A  ++  M  + C  NV ++SILI+G CK+  ++ AL L+ EM  +GI
Sbjct: 168 LDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGI 227

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            PD   Y  +  GL    +V+ A++LFD+M+  GV  D       ++G C    + EA  
Sbjct: 228 LPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFS 287

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           L R      Y LD+R Y+CLI GL ++ R +    L+R +    +  DV  Y IM+  L 
Sbjct: 288 LLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLA 347

Query: 352 ADGKMDKARDLFLDM 366
             GK+  A +L  +M
Sbjct: 348 EAGKVRDALELLNEM 362



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 31/241 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  + M+L   G  P ++TYN L+NG C+ G+   A  LF EM     +F  +  P+TV
Sbjct: 507 KAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREM-----QFKGL-SPDTV 560

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+I+GL +    + A ++F +M+     P+   Y +++   C   +   A  L+++ 
Sbjct: 561 TYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKY 620

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF---VYNTLMDGFCLT 178
           +         +   I     K     E  + +  ++++  + N F    Y   + G C T
Sbjct: 621 LRNIRSQEDEAIKAIEGYFEKQ----EVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQT 676

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYC---------KNKEIEGALSLYSEMLSK 229
            RV  A ++F+ +E          Y ++I   C         K  +++ A+ ++   + K
Sbjct: 677 RRVGEALKIFLILE---------EYKVVITPPCCVKLIYFLLKEGDLDRAIDVFLYTIEK 727

Query: 230 G 230
           G
Sbjct: 728 G 728


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 187/388 (48%), Gaps = 33/388 (8%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHT-------------------------IV 37
           A A  M  R+   + NV  YN LI+GLC+                             ++
Sbjct: 245 AKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVL 304

Query: 38  ALNLFEEMANGNG------EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
            L   +E   G G      E G V  P     +++++GL ++G V  A +L  ++K    
Sbjct: 305 GLCKVQEFEVGAGVMDEMIELGFV--PTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGA 362

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P++  YN+LI+  C    ++EA+ LF EM ++G+  N V+++++++  C+ GK+D A  
Sbjct: 363 MPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIH 422

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
            L  MI  G++   + YN+L++G C  G ++ A   F  M   G K  V SY+ LI+GYC
Sbjct: 423 FLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYC 482

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
              ++  A  LY EM  KGI P+   + TL   LF  +++  AF+LFDEM    +  +  
Sbjct: 483 NKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEV 542

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y   I+G CK G  V+A EL   +       D   Y  LI  LC +GR+  A +    L
Sbjct: 543 TYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDL 602

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKA 359
            R     + + Y+ ++H  C +G++  A
Sbjct: 603 HREHFKLNEMCYSALLHGYCKEGRLRDA 630



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/359 (32%), Positives = 173/359 (48%), Gaps = 6/359 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  +++  G  P++F YN LIN LC+ G    A  LF+EM    GE G+    N 
Sbjct: 348 VDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM----GEKGLCA--ND 401

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+ +ID  C+ G +D A     KM    I   V  YNSLI+G C   + + A   F E
Sbjct: 402 VTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDE 461

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+D+G++P VVS+  +++  C  GK+ EA RL   M   G+ PN + + TL+       R
Sbjct: 462 MIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANR 521

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  LF  M       N  +Y+++I G+CK      A  L ++M+ KG+ PD   Y  
Sbjct: 522 MTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRP 581

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L   L    +V  A K  D++ R     +   Y   + G CK G + +A+ + R +    
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++D+  Y  LIDG  K       + L +++    L  D V Y  MI      G + KA
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKA 700



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 182/369 (49%), Gaps = 41/369 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   +  TY TL+ GLC+     V   + +EM     E G V  P     +++++GL ++
Sbjct: 291 GLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMI----ELGFV--PTEAALSSLVEGLRRK 344

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V  A +L  ++K     P++  YN+LI+  C    ++EA+ LF EM ++G+  N V++
Sbjct: 345 GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTY 404

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           +++++  C+ GK+D A   L  MI  G++   + YN+L++G C  G ++ A   F  M  
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID 464

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K  V SY+ LI+GYC   ++  A  LY EM  KGI P+   + TL   LF  +++  
Sbjct: 465 KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD 524

Query: 254 AFKLFDEMQ-----------------------------------RHGVAADTWAYRTFID 278
           AF+LFDEM                                    + G+  DT+ YR  I 
Sbjct: 525 AFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLIS 584

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            LC  G + EA +    L    ++L+   Y+ L+ G CK GRL+ A  + R + +  +  
Sbjct: 585 SLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDM 644

Query: 339 DVVTYNIMI 347
           D+V Y ++I
Sbjct: 645 DLVCYAVLI 653



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 203/436 (46%), Gaps = 76/436 (17%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A  F+ K+ + G +  V+ YN+LING C+ G+   A++ F+EM +         KP 
Sbjct: 417 LDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG------LKPT 470

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V+YT++I G C +G + +A  L+ +M  + I PN  T+ +LI     AN   +A  LF 
Sbjct: 471 VVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFD 530

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM++Q + PN V++NV++   CK G   +A  LL  M+Q G+ P+ + Y  L+   C TG
Sbjct: 531 EMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTG 590

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-------- 231
           RV  A++    +     K N   YS L++GYCK   +  AL +  EM+ +G+        
Sbjct: 591 RVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYA 650

Query: 232 ---------------------------KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
                                      +PD VIY ++  G  +   V++AF ++D M   
Sbjct: 651 VLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDE 710

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI-------------------------- 298
           G   +   Y T I+ LCK G + +A  L++ + +                          
Sbjct: 711 GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKA 770

Query: 299 -------LKYEL-DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
                  LK  L +  +YN L+ G CK GR++ A +L   +    +  D +TY+ +I+  
Sbjct: 771 VQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQC 830

Query: 351 CADGKMDKARDLFLDM 366
           C  G +D A + +  M
Sbjct: 831 CRRGNLDGAIEFWDTM 846



 Score =  165 bits (417), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 183/397 (46%), Gaps = 43/397 (10%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           LF ++   G  P+++ Y  +I   C   +   A  + + M + +         N V Y  
Sbjct: 215 LFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSD--------LNVVVYNV 266

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I GLCK   V +A E+   +  + +  + VTY +L+ G C   ++     +  EM++ G
Sbjct: 267 LIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELG 326

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
             P   + + ++  L + GK+ +A  L+  + ++G  P+ FVYN L++  C  G+ + AE
Sbjct: 327 FVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAE 386

Query: 186 ELFVSMESMGCKHNVFSYSILI-----------------------------------NGY 210
            LF  M   G   N  +YSILI                                   NG+
Sbjct: 387 LLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGH 446

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           CK   +  A+S + EM+ KG+KP VV Y +L  G     ++  AF+L+ EM   G+A +T
Sbjct: 447 CKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNT 506

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
           + + T I  L +   + +A  LF  +       +   YN +I+G CK G    A+EL   
Sbjct: 507 YTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQ 566

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           + +  L+ D  TY  +I +LC+ G++ +A+    D+ 
Sbjct: 567 MVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLH 603



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/367 (29%), Positives = 172/367 (46%), Gaps = 40/367 (10%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PN  TYN +I G C+ G+T+ A  L  +M     + G+V  P+T TY  +I  LC  G V
Sbjct: 539 PNEVTYNVMIEGHCKEGNTVKAFELLNQMV----QKGLV--PDTYTYRPLISSLCSTGRV 592

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +AK+    +  E+   N + Y++L+HG+C      +A  +  EM+ +GV  ++V + V+
Sbjct: 593 CEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVL 652

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           ++   K         LL+ M    +RP+  +Y +++DG+   G V +A  ++  M   GC
Sbjct: 653 IDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGC 712

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLS---------------------------- 228
             N+ +Y+ LIN  CK   ++ A  L+ EML                             
Sbjct: 713 TPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQ 772

Query: 229 ------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
                 KG+  + V YN L  G  ++ +VE A KL DEM  + +  D   Y T I   C+
Sbjct: 773 LHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCR 832

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G +  A+E + T+     + D  AYN LI G C +G L  A+EL   + R  +  +  T
Sbjct: 833 RGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQAT 892

Query: 343 YNIMIHA 349
           +  + H 
Sbjct: 893 HKSLSHG 899



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 139/266 (52%), Gaps = 7/266 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G + ++  Y  LI+G  +   T     L + M +         +P+ V YT++IDG  K 
Sbjct: 641 GVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQR------LRPDKVIYTSMIDGYSKA 694

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V KA  ++  M DE   PN+VTY +LI+  C A   ++A+ L+ EM+     PN V++
Sbjct: 695 GSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTY 754

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
              ++ L + G M++A +L   M++ G+  N   YN L+ GFC  GRV  A +L   M  
Sbjct: 755 CCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMID 813

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
                +  +YS +I   C+   ++GA+  +  ML+KG+KPD + YN L  G     ++ +
Sbjct: 814 NAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGK 873

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDG 279
           AF+L D+M R GV  +   +++   G
Sbjct: 874 AFELRDDMIRRGVKPNQATHKSLSHG 899



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 135/262 (51%), Gaps = 2/262 (0%)

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
           ++ LI  +       ++  +F  M    + P V +   ++N L K  ++D    L   ++
Sbjct: 161 FDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEIL 220

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
            +G+RP+ ++Y  ++  FC      +A+E+   MES     NV  Y++LI+G CKNK + 
Sbjct: 221 SMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDL--NVVVYNVLIHGLCKNKRVW 278

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A+ + + ++ KG+    V Y TL +GL ++ + E    + DEM   G      A  + +
Sbjct: 279 EAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLV 338

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           +GL + G +V+A +L   ++ +     +  YN LI+ LCK G+   A  LF+ +    L 
Sbjct: 339 EGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLC 398

Query: 338 ADVVTYNIMIHALCADGKMDKA 359
           A+ VTY+I+I + C  GK+D A
Sbjct: 399 ANDVTYSILIDSFCRRGKLDTA 420



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 143/312 (45%), Gaps = 2/312 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P   T   +++GL K   VD    LF ++    I P++  Y ++I  FC   ++ +AK +
Sbjct: 191 PQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEM 250

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M  +    NVV +NV+++ LCKN ++ EA  +   +IQ G+  +   Y TL+ G C 
Sbjct: 251 IQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCK 308

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
                    +   M  +G      + S L+ G  +  ++  A  L + +   G  P + +
Sbjct: 309 VQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFV 368

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L   L +  + + A  LF EM   G+ A+   Y   ID  C+ G +  A+     + 
Sbjct: 369 YNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMI 428

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           +   ++ +  YN LI+G CK G L  A   F  +    L   VV+Y  +I   C  GK+ 
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 358 KARDLFLDMEAK 369
           +A  L+ +M  K
Sbjct: 489 EAFRLYHEMTGK 500



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/129 (34%), Positives = 68/129 (52%), Gaps = 6/129 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ME A       + G   N  +YN L+ G C+ G    A  L +EM + N  F     P+ 
Sbjct: 767 MEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLLDEMID-NAIF-----PDC 820

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +TY+TII   C+ G +D A E +  M ++ + P+ + YN LI+G C A +  +A  L  +
Sbjct: 821 ITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDD 880

Query: 121 MMDQGVQPN 129
           M+ +GV+PN
Sbjct: 881 MIRRGVKPN 889


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  187 bits (474), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 183/368 (49%), Gaps = 7/368 (1%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A  LF  +R    C P+V  YNTLI G C+ G    AL++F  +          CKPN 
Sbjct: 107 QAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGS-----CKPNA 161

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V++ T++  LCK      A  +F +M    +  +V   N+LIH  C      +A+ L   
Sbjct: 162 VSFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHH 221

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M       +  ++ +++N  C+ G+M E +  +EL    G   +A  YN ++ GF   GR
Sbjct: 222 MTAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGR 281

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A +LF S  +     +VF+Y++LI   CK+K++E AL+L+ E    G+  DV  Y+ 
Sbjct: 282 LAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSY 340

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L     +  +  +A ++F  MQ+ G   DT  Y   I  L K G + EA+EL   +    
Sbjct: 341 LMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKG 400

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
              D R YN +ID L   GR + A+  F  + R     DVVTYN +++ L    + D+A 
Sbjct: 401 IMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEAC 460

Query: 361 DLFLDMEA 368
           DLF +M+A
Sbjct: 461 DLFDEMQA 468



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 172/346 (49%), Gaps = 8/346 (2%)

Query: 26  INGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLK 85
           I    R G    A+ + ++M  GN      C+P+TV +T  +  LC+   V++A  LF  
Sbjct: 60  IQAFGRAGDLDAAMGMLDDMRRGN-----FCQPDTVAFTAAMHWLCEVRRVEQAMTLFDD 114

Query: 86  MKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG-VQPNVVSFNVIMNELCKN 143
           M++  +  P+VV YN+LI G+C A D + A  +F  +  +G  +PN VSF+ ++  LCK 
Sbjct: 115 MRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKM 174

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
            +  +A  + + M+  G++ +  V NTL+   C  G + +A  L   M +  C  + F+Y
Sbjct: 175 SRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTY 234

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
            IL+N +C+  ++    S        G     V YN +  G     ++  A +LF+    
Sbjct: 235 GILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMT 294

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
                D + Y   I  LCK+  + EA+ LF+        LD+  Y+ L+D   K+GR   
Sbjct: 295 KESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAK 353

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           A E+F ++ +   + D V YN++I  L   GK+D+A +L  DM  K
Sbjct: 354 ALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 399



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 173/367 (47%), Gaps = 11/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTG--HTIVALNLFEEMANGNGEFGVVCKPN 59
           +A  L   +    C  + FTY  L+N  CR G  H + +   F E+A  +G     C  +
Sbjct: 214 QARRLLHHMTAHACARDAFTYGILVNAHCRAGQMHEVAS---FMELARHDG-----CALS 265

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            V Y  II G  + G + +A +LF     +   P+V TYN LI   C +    EA  LF 
Sbjct: 266 AVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQ 324

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           E    GV  +V +++ +M+   K G+  +A  +   M + G  P+  VYN L+      G
Sbjct: 325 EAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQG 384

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +V+ A EL   M   G   +  +Y+I+I+        E A S +  M  +   PDVV YN
Sbjct: 385 KVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYN 444

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL  GL ++ + + A  LFDEMQ +    D   + T ID L K G + +A+E    L  +
Sbjct: 445 TLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKM 504

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +  +   YN LI G C+SG++   +ELF+ +       D +TY I++      G    A
Sbjct: 505 GHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 564

Query: 360 RDLFLDM 366
            +L  +M
Sbjct: 565 MELLQEM 571



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 178/370 (48%), Gaps = 8/370 (2%)

Query: 1   MEAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M   A FM+L R  GC  +   YN +I G  R G    A  LFE              P+
Sbjct: 247 MHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKES------VPD 300

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY  +I  LCK   +++A  LF + +   +  +V TY+ L+  F  A    +A  +F 
Sbjct: 301 VFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFY 359

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            M   G  P+ V +NV+++ L K GK+DEA  LLE M + G+ P+   YN ++D     G
Sbjct: 360 NMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCG 419

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R  +A   F  M+      +V +Y+ L+NG  K +  + A  L+ EM +    PD+  + 
Sbjct: 420 RYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFG 479

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
           TL   L +  ++E A +    + + G A +++ Y   I G C++G + +  ELF+ +   
Sbjct: 480 TLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIEC 539

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D   Y  L+ G  + G   +A EL + + R      + TYN++I +L   G+++ A
Sbjct: 540 SCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDA 599

Query: 360 RDLFLDMEAK 369
             LF +M AK
Sbjct: 600 YTLFKEMIAK 609



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 141/272 (51%), Gaps = 6/272 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  ++  GC P+   YN LI+ L + G    AL L E+M N  G       P+  
Sbjct: 353 KALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM-NRKGIM-----PDCR 406

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +ID L   G  +KA   F  MK    +P+VVTYN+L++G       +EA  LF EM
Sbjct: 407 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 466

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P++ +F  +++ L K G+M++A      ++++G  PN+++YN L+ GFC +G+V
Sbjct: 467 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQV 526

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++  ELF  M    C  +  +Y+IL+ G+ +      A+ L  EM+ +G  P +  YN L
Sbjct: 527 DKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVL 586

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
              L    QVE A+ LF EM   G   D   Y
Sbjct: 587 IRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY 618



 Score =  151 bits (382), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/345 (28%), Positives = 167/345 (48%), Gaps = 7/345 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF         P+VFTYN LI  LC++     AL LF+E   G    GVV   +  
Sbjct: 284 EATQLFESTMTKESVPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQG----GVVL--DVF 336

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ ++D   K G   KA E+F  M+     P+ V YN LI         +EA  L  +M
Sbjct: 337 TYSYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ P+  ++N++++ L   G+ ++A     +M +    P+   YNTL++G     R 
Sbjct: 397 NRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRT 456

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A +LF  M++  C  ++ ++  LI+   K   +E AL   + ++  G  P+  IYN L
Sbjct: 457 DEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNAL 516

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     QV++ ++LF +M       D+  Y   + G  + G+   A+EL + +    +
Sbjct: 517 ISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGH 576

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
              +  YN LI  L  +G+++ A+ LF+ +       D+ TY+ +
Sbjct: 577 TPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 6/201 (2%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            P+V TYNTL+NGL +   T  A +LF+EM          C P+  T+ T+ID L K G 
Sbjct: 437 SPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK------CMPDLTTFGTLIDTLAKAGR 490

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A E   ++      PN   YN+LI GFC +   ++   LF +M++    P+ +++ +
Sbjct: 491 MEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTI 550

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++    + G    A  LL+ M++ G  P    YN L+    + G+V  A  LF  M + G
Sbjct: 551 LVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKG 610

Query: 196 CKHNVFSYSILINGYCKNKEI 216
              ++ +YS L N    NK +
Sbjct: 611 FNPDMQTYSALPNLSTPNKSV 631


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/328 (32%), Positives = 183/328 (55%)

Query: 40  NLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 99
           NL + +A+ N       +P  + +  ++  + +    +    LF +M+   I  NV T +
Sbjct: 20  NLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLS 79

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            LI+ FC+ +  +    +F + + +G +P+VV F  +++ +C+ GK + A+ LL+ M  +
Sbjct: 80  ILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLV 139

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G  P+    N+LM G+C  G++++  ++F  M S G K +V+SYSI INGYCK ++I+ A
Sbjct: 140 GCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEA 199

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + L+ EM  +G+ P+ V YNTL   L +  +   A  LF +M   G++ D  AY T +DG
Sbjct: 200 MELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDG 259

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
            CK G + E + LF+ ++    + D+  Y  +I+G+C+S ++K A E+   L    L  D
Sbjct: 260 FCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPD 319

Query: 340 VVTYNIMIHALCADGKMDKARDLFLDME 367
           V TY  ++  LC +G + +A  LF  ME
Sbjct: 320 VHTYTALVDGLCREGSIIEALRLFRKME 347



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 159/292 (54%), Gaps = 6/292 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           ++F K    G +P+V  + TLI+G+CR G T +A  L +EM        V C P+ VT  
Sbjct: 96  SVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL------VGCVPDVVTCN 149

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           +++ G C +G +DK +++F  M  + + P+V +Y+  I+G+C     +EA  LF EM  +
Sbjct: 150 SLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHR 209

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV PN V++N ++  LC+  +  +A  L   M   G+ P+   Y+TL+DGFC  G ++  
Sbjct: 210 GVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEM 269

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  M+    K ++  Y+I+ING C++++++ A  + S ++ +G+KPDV  Y  L  G
Sbjct: 270 LVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDG 329

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           L     +  A +LF +M+  G    + +Y   + G  ++      V+L   +
Sbjct: 330 LCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEM 381



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 171/348 (49%), Gaps = 6/348 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A F ++     +P +  +N L++ + R       ++LF+EM     EF  + K N  
Sbjct: 23  DALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEM-----EFRGI-KYNVC 76

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + +I+  C    VD    +F K       P+VV + +LI G C       A  L  EM
Sbjct: 77  TLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+VV+ N +M   C  GK+D+  ++  LM+  G++P+ + Y+  ++G+C   ++
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKI 196

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ELF  M   G   N  +Y+ LI   C+      A  L+ +M + G+ PD++ Y+TL
Sbjct: 197 DEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTL 256

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   ++    LF EMQR  V  D   Y   I+G+C++  + +A E+   L +   
Sbjct: 257 LDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGL 316

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           + D+  Y  L+DGLC+ G +  A  LFR +     +    +YN+++  
Sbjct: 317 KPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQG 364



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/290 (30%), Positives = 149/290 (51%)

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A   F +M D N  P ++ +N L+        +     LF EM  +G++ NV + 
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           ++++N  C    +D    +    ++ G +P+  ++ TL+DG C  G+   A  L   M  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           +GC  +V + + L+ GYC   +I+    ++  M+SKG+KPDV  Y+    G  ++ +++ 
Sbjct: 139 VGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDE 198

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +LFDEM   GV  +   Y T I  LC+     +A  LFR +       DI AY+ L+D
Sbjct: 199 AMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLD 258

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           G CK G L     LF+ + R ++  D+V Y I+I+ +C   K+  A+++ 
Sbjct: 259 GFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVL 308



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 142/275 (51%), Gaps = 7/275 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA L  ++ + GC P+V T N+L+ G C  G       +F  M +         KP+  +
Sbjct: 129 AAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKG------LKPDVYS 182

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y+  I+G CK   +D+A ELF +M    + PN VTYN+LI   C A    +A+ LF +M 
Sbjct: 183 YSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMC 242

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G+ P++++++ +++  CK G +DE   L + M +  V+P+  VY  +++G C + +V 
Sbjct: 243 ACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVK 302

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+E+   +   G K +V +Y+ L++G C+   I  AL L+ +M   G  P    YN L 
Sbjct: 303 DAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLL 362

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            G  + +      +L  EM   G  AD    RTF+
Sbjct: 363 QGCLQHNDTSTVVQLIHEMADRGFYADAVT-RTFL 396



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 130/263 (49%)

Query: 107 YANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
           Y  + ++A   F  M+D+  QP ++ FN +++ + +  K +    L + M   G++ N  
Sbjct: 17  YFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVC 76

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
             + L++ FC    V+    +F      G K +V  ++ LI+G C+  + E A  L  EM
Sbjct: 77  TLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEM 136

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
              G  PDVV  N+L  G     ++++  K+F  M   G+  D ++Y  FI+G CK   I
Sbjct: 137 GLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKI 196

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            EA+ELF  +       +   YN LI  LC++ R + A  LFR +    L  D++ Y+ +
Sbjct: 197 DEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTL 256

Query: 347 IHALCADGKMDKARDLFLDMEAK 369
           +   C  G +D+   LF +M+ +
Sbjct: 257 LDGFCKQGNLDEMLVLFQEMQRR 279



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 86/172 (50%), Gaps = 6/172 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   G  P++  Y+TL++G C+ G+    L LF+EM         + KP+ V
Sbjct: 233 DAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRR------LVKPDLV 286

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT II+G+C+   V  AKE+  ++  E + P+V TY +L+ G C      EA  LF +M
Sbjct: 287 VYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKM 346

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
            + G  P   S+NV++    ++       +L+  M   G   +A     L D
Sbjct: 347 EEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKD 398


>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 603

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 182/355 (51%), Gaps = 22/355 (6%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P+V TY  LI+  C+      A+ L  EM +        CKPN VTY  +I G+C EG
Sbjct: 256 CYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKE------CKPNVVTYNALIKGICNEG 309

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +D+       +      P+V++Y  ++H       W +A  L   M+ +G   NVV+FN
Sbjct: 310 RLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFN 369

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            ++N LC+ G + +A  +LE++ +    PN+  YN  + GFC     N        M S 
Sbjct: 370 TLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFC-----NEKSXYLEIMVSR 424

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           GC  ++ +Y+IL+   CK+++++ A+ +  ++  KG+KPDV+ Y+ +  GL ++ + + A
Sbjct: 425 GCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLA 484

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
            +L +E    G+  +   + + + G+ + G + EA+++F  L  L    +  AYN +I G
Sbjct: 485 LELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMG 544

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           LCK+          +   RG    +  TYNI++  + ++G   +A  L+ ++ +K
Sbjct: 545 LCKT----------QQTSRGCKPTE-ATYNILVKGITSEGXPKEASKLWSELYSK 588



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 155/330 (46%), Gaps = 22/330 (6%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L +++    C+PNV TYN LI G+C  G     +   + + +    +G   +P+ +
Sbjct: 278 QAMKLLIEMVSKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPS----YGY--QPDVI 331

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YT ++  L   G    A +L   M  +  + NVVT+N+LI+  C      +A  +   +
Sbjct: 332 SYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMI 391

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 PN +S+N  +   C     +E S  LE+M+  G  P+   YN L+   C   +V
Sbjct: 392 XKHVCTPNSISYNPSIGGFC-----NEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKV 446

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+   +   G K +V +YSI+I+G  K  + + AL L  E  +KG+KP+++ + ++
Sbjct: 447 DDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSV 506

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G+    +V  A K+F  ++  G+  + +AY   I GLCK        +          
Sbjct: 507 VGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKTQQTSRGCKPTEA------ 560

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
                 YN L+ G+   G  K A +L+  L
Sbjct: 561 -----TYNILVKGITSEGXPKEASKLWSEL 585



 Score =  131 bits (330), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/265 (30%), Positives = 135/265 (50%), Gaps = 24/265 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L   +   GC  NV T+NTLIN LC+ G    A N+ E +         VC PN++
Sbjct: 348 DAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKH------VCTPNSI 401

Query: 62  TYTTIIDGLCKEGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +Y   I G C E      K  +L+ M      P++VTYN L+   C     ++A  +  +
Sbjct: 402 SYNPSIGGFCNE------KSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQ 455

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           +  +G++P+V+++++I++ L K GK D A  LLE     G++PN   + +++ G    G+
Sbjct: 456 LSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGK 515

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V+ A ++F  +E +G + N F+Y+++I G CK ++            S+G KP    YN 
Sbjct: 516 VHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKTQQT-----------SRGCKPTEATYNI 564

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHG 265
           L  G+      + A KL+ E+   G
Sbjct: 565 LVKGITSEGXPKEASKLWSELYSKG 589



 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 151/340 (44%), Gaps = 43/340 (12%)

Query: 70  LCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           L K G +D+A      M ++ NI P V+   +LI  FC       A  +   + + G   
Sbjct: 123 LIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESGAVI 182

Query: 129 NVVSFN---------VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           ++  +N         V++   C +G+++EA R+L+ M    V PN   Y+T++   C   
Sbjct: 183 DITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCM---SVSPNGINYDTILRSLCDRC 239

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++ +  E+      + C  +V +Y+ LI+  CK+  +  A+ L  EM+SK  KP+VV YN
Sbjct: 240 KLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYN 299

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  G+    +++   +    +  +G   D  +Y   +  L   G   +A++L  ++   
Sbjct: 300 ALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCK 359

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI---------------------- 337
              L++  +N LI+ LC+ G L  A+ +   + + V                        
Sbjct: 360 GCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNEKSXYLE 419

Query: 338 --------ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
                    D+VTYNI++ ALC D K+D A ++   +  K
Sbjct: 420 IMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFK 459



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 116/243 (47%), Gaps = 13/243 (5%)

Query: 137 MNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++ L KNG++DEASR LE M   G + P       L+  FC  GR   A  +   +E  G
Sbjct: 120 LHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESG 179

Query: 196 CKHNVFSYS---------ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLF 246
              ++  Y+         +LI GYC + E+E AL +   M    + P+ + Y+T+   L 
Sbjct: 180 AVIDITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCM---SVSPNGINYDTILRSLC 236

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
           +  ++++  ++ D   +     D   Y   ID  CK+  + +A++L   +   + + ++ 
Sbjct: 237 DRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVV 296

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            YN LI G+C  GRL       ++LP      DV++Y I++H+L + G+   A  L   M
Sbjct: 297 TYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASM 356

Query: 367 EAK 369
             K
Sbjct: 357 LCK 359


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/378 (29%), Positives = 193/378 (51%), Gaps = 19/378 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F K++ FGC+P+VFTYN++++ + +    ++AL ++ +M   N        PN  
Sbjct: 149 KAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY------NPNRA 202

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +++GLCK G  D A ++F +M  + I PN + Y  ++ G C A   ++   L   M
Sbjct: 203 TFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTM 262

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G  P+ ++ N +++  CK G++DEA  LL+L  + G       Y++L+DG     R 
Sbjct: 263 KVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRY 322

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  +E    M   G + +V  Y+ILI G+C+   ++ AL++ ++M  +G+ PD   YN L
Sbjct: 323 DEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNAL 382

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  ++  +++A  L  E+ ++     +  Y   I G+C+NG + EA ++F  +  L  
Sbjct: 383 IKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGC 442

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-------------LIADVVTYNIMIH 348
              I  +N LIDGLCK+G L+ A  LF  +  G               + D  +   M+ 
Sbjct: 443 SPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVE 502

Query: 349 ALCADGKMDKARDLFLDM 366
            LC  G + KA  L + +
Sbjct: 503 RLCESGLILKAYKLLMQL 520



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/399 (28%), Positives = 192/399 (48%), Gaps = 55/399 (13%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP+V  Y  LI G C  G    ALN+  +M            P+T  Y  +I G C  
Sbjct: 336 GIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRG------LSPDTYCYNALIKGFCDV 389

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +DKA+ L L++   +  P   TY  LI G C     +EA+ +F +M + G  P++++F
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTF 449

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV--------------YNTLMDGFCLTG 179
           N +++ LCK G+++EA  L   M +IG  P+ F+                T+++  C +G
Sbjct: 450 NALIDGLCKAGELEEARHLFYKM-EIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESG 508

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
            + +A +L + +   G   ++ +Y++LING+CK K I GA  L+ E+  KG  PD V Y 
Sbjct: 509 LILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYG 568

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRI 298
           TL  G   + + E AF++ D+M ++G    +  Y+  +   C+ G +  A  L+ + LR 
Sbjct: 569 TLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRS 628

Query: 299 LKYELDI---------------RAYNCLID------------------GLCKSGRLKIAW 325
           L  + D                +A  CL++                  GLC++ R + A 
Sbjct: 629 LPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEAL 688

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           ++F  L    +  +  +  ++I+ LC DG ++ A D+FL
Sbjct: 689 KIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFL 727



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 188/386 (48%), Gaps = 49/386 (12%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           T+N +I+ L +         + EE+ N N +   +  P   T++ +I    K G  +KA 
Sbjct: 98  THNLVIDMLAKDDGFDTYWKILEELKNSNIQ---IPPP---TFSVLIAAYAKSGMAEKAV 151

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
           E F KMKD    P+V TYNS++H       +  A  ++ +M+     PN  +F +++N L
Sbjct: 152 ESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGL 211

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           CKNGK D+A ++ + M Q G+ PN  +Y  ++ G C   R +    L  +M+  GC  + 
Sbjct: 212 CKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDS 271

Query: 201 FSYSILINGYCKNKEIEGALSL---------------YS--------------------E 225
            + + L++G+CK  +I+ A +L               YS                    +
Sbjct: 272 ITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRK 331

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M   GI+PDVV+Y  L  G  E+  V+ A  + ++M + G++ DT+ Y   I G C  G 
Sbjct: 332 MFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGL 391

Query: 286 IVEAVELFRTLRILKYELDIRAYNC----LIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           + +A    R+L++   + D    +C    LI G+C++G L  A ++F  +        ++
Sbjct: 392 LDKA----RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIM 447

Query: 342 TYNIMIHALCADGKMDKARDLFLDME 367
           T+N +I  LC  G++++AR LF  ME
Sbjct: 448 TFNALIDGLCKAGELEEARHLFYKME 473



 Score =  137 bits (346), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 173/338 (51%), Gaps = 10/338 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-------GV 54
           EA  +F ++   GC P++ T+N LI+GLC+ G    A +LF +M  G           G 
Sbjct: 429 EARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGA 488

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
               +T +  T+++ LC+ G + KA +L +++ D  + P+++TYN LI+GFC A + N A
Sbjct: 489 DRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGA 548

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
             LF E+  +G  P+ V++  +++   +  + ++A R+L+ M++ G  P++ VY  LM  
Sbjct: 549 FKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTW 608

Query: 175 FCLTGRVNRAEELFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
            C  G+++ A  L++  + S+  + +      L   + +  E+E A+    EM  K    
Sbjct: 609 SCRKGKLSVAFSLWLKYLRSLPSQED--ETLKLAEEHFEKGELEKAVRCLLEMNFKLNNF 666

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           ++  Y    IGL +  + E A K+F  ++   +  +  +    I+GLCK+G +  AV++F
Sbjct: 667 EIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIF 726

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
                  + L  R  N L+  L    ++K A +L   +
Sbjct: 727 LYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 764



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 143/306 (46%)

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT+  +ID L K+   D   ++  ++K+ NI     T++ LI  +  +    +A   F +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M D G +P+V ++N I++ + +      A  +   M+++   PN   +  L++G C  G+
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            + A ++F  M   G   N   Y+I+++G C+ K  +    L + M   G  PD +  N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++ Q++ AF L    ++ G       Y + IDGL +     E  E  R +    
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            E D+  Y  LI G C+ G +  A  +   + +  L  D   YN +I   C  G +DKAR
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 361 DLFLDM 366
            L L++
Sbjct: 397 SLQLEI 402



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 96/241 (39%), Gaps = 46/241 (19%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +L++ G  P+  TY TLI+G  R      A  + ++M   NG     C P++  
Sbjct: 548 AFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVK-NG-----CTPSSAV 601

Query: 63  YTTIIDGLCKEGFVDKAKELFLK-------MKDENI------------------------ 91
           Y  ++   C++G +  A  L+LK        +DE +                        
Sbjct: 602 YKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNF 661

Query: 92  ---NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
              N  +  Y   + G C A    EA  +F+ + +  +  N  S  +++N LCK+G ++ 
Sbjct: 662 KLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCVMLINGLCKDGNLEM 721

Query: 149 ASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG------CKHNVFS 202
           A  +    ++ G      + N L+    L  ++  A +L   M S G        H + S
Sbjct: 722 AVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLLNRMNSAGYDLDEYLHHRIKS 781

Query: 203 Y 203
           Y
Sbjct: 782 Y 782


>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 607

 Score =  187 bits (474), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 179/359 (49%), Gaps = 9/359 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++      P V ++NTLING C+ G+  V   L   M           +P+  
Sbjct: 258 DAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSR------TRPDVF 311

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+ LCKE  +D A  LF +M +  + PN V + +LIHG       +  K  + +M
Sbjct: 312 TYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKM 371

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+QP++V +N ++N  CKNG +  A  +++ MI+ G+RP+   Y TL+DGFC  G V
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDV 431

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A E+   M+  G + +   +S LI G CK   +  A     EML  G+KPD V Y  +
Sbjct: 432 DTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMM 491

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +    +  FKL  EMQ  G   +   Y   ++GLCK G +  A  L   +  +  
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNVGV 551

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             D   YN L++G     R   A + ++  P   ++AD+ +Y  +++ L    K  + R
Sbjct: 552 VPDDITYNTLLEG---HHRHANASKHYKQKPEIGIVADLASYKSLVNELYRASKDHRNR 607



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 169/307 (55%), Gaps = 1/307 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   +  +++  CKEG +  A+++F ++   ++ P VV++N+LI+G+C   + +    L 
Sbjct: 239 NVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLK 298

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
             M     +P+V +++ ++N LCK  KMD A RL   M + G+ PN  ++ TL+ G    
Sbjct: 299 HHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRN 358

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+++  +E +  M S G + ++  Y+ L+NG+CKN ++  A ++   M+ +G++PD V Y
Sbjct: 359 GQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTY 418

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  G      V+ A ++  EM ++G+  D   +   I G+CK G +++A    R +  
Sbjct: 419 TTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLR 478

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D   Y  ++D  CK G  +  ++L + +     I +VVTYN++++ LC  G+M  
Sbjct: 479 AGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKN 538

Query: 359 ARDLFLD 365
           A D+ LD
Sbjct: 539 A-DMLLD 544



 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 182/345 (52%), Gaps = 6/345 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
             +M++   G   NV+ +N L+N  C+ G+   A  +F+E+   +       +P  V++ 
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRS------LRPTVVSFN 279

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G CK G +D    L   M+     P+V TY++LI+  C  N  + A  LF EM ++
Sbjct: 280 TLINGYCKVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCER 339

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN V F  +++   +NG++D      + M+  G++P+  +YNTL++GFC  G +  A
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +   M   G + +  +Y+ LI+G+C+  +++ AL +  EM   GI+ D V ++ L  G
Sbjct: 400 RNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICG 459

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           + +  +V  A +   EM R G+  D   Y   +D  CK G      +L + ++   +  +
Sbjct: 460 MCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHIPN 519

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           +  YN L++GLCK G++K A  L  ++    ++ D +TYN ++  
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNVGVVPDDITYNTLLEG 564



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 152/287 (52%)

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
            ++++ D     NV  +N L++ FC   +  +A+ +F E+  + ++P VVSFN ++N  C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G +D   RL   M +   RP+ F Y+ L++  C   +++ A  LF  M   G   N  
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDV 346

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            ++ LI+G+ +N +I+     Y +MLSKG++PD+V+YNTL  G  +   +  A  + D M
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            R G+  D   Y T IDG C+ G +  A+E+ + +     ELD   ++ LI G+CK GR+
Sbjct: 407 IRRGLRPDKVTYTTLIDGFCRGGDVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRV 466

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             A    R + R  +  D VTY +M+ A C  G       L  +M++
Sbjct: 467 IDAERALREMLRAGMKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS 513



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 70/148 (47%)

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            Y E+L  G   +V ++N L     +   +  A K+FDE+ +  +     ++ T I+G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNICDAQKVFDEITKRSLRPTVVSFNTLINGYC 286

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K G +     L   +   +   D+  Y+ LI+ LCK  ++  A  LF  +    LI + V
Sbjct: 287 KVGNLDVGFRLKHHMEKSRTRPDVFTYSALINALCKENKMDGAHRLFYEMCERGLIPNDV 346

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  +IH    +G++D  ++ +  M +K
Sbjct: 347 IFTTLIHGHSRNGQIDLMKESYQKMLSK 374


>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
 gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 472

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/358 (31%), Positives = 180/358 (50%), Gaps = 16/358 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           ++  +F K++ F C+P+   Y T++  L       +A   ++ M     E G+   P   
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMR----EIGL--PPTVA 157

Query: 62  TYTTIIDGLCK-EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           +   +I  LC+ +G VD   ++FL+M     +P+  TY +LI G C     +EAK LF E
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++   P VV++  ++N LC +  +DEA R LE M   G+ PN F Y++LMDG C  GR
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             +A ELF  M + GC+ N+ +Y+ LI G CK ++I+ A+ L   M  +G+KPD  +Y  
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD--TW-----AYRTFIDGLCKNGYIVEAVELF 293
           +  G   I +   A    DEM   G+  +  TW          + GLC N Y   A  L+
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCAN-YPSRAFTLY 396

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI-HAL 350
            ++R     +++     L+  LCK G  + A +L   +     I    T+ ++I H L
Sbjct: 397 LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTL 454



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 145/288 (50%), Gaps = 2/288 (0%)

Query: 79  AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
           A++L ++MK EN   +     S+  G+   +   ++  +F +M D    P+  ++  ++ 
Sbjct: 70  AEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129

Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT-GRVNRAEELFVSMESMGCK 197
            L +  +++ A +  + M +IG+ P     N L+   C   G V+   ++F+ M   GC 
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
            + ++Y  LI+G C+   I+ A  L++EM+ K   P VV Y +L  GL     V+ A + 
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRY 249

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
            +EM+  G+  + + Y + +DGLCK+G  ++A+ELF  +       ++  Y  LI GLCK
Sbjct: 250 LEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCK 309

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             +++ A EL   +    L  D   Y  +I   CA  K  +A + FLD
Sbjct: 310 EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN-FLD 356



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 4/195 (2%)

Query: 179 GRVNR---AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
           GRV+R   +  +F  M+   C  +  +Y  ++    +  ++  A   Y  M   G+ P V
Sbjct: 97  GRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTV 156

Query: 236 VIYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
              N L   L      V+   K+F EM + G   D++ Y T I GLC+ G I EA +LF 
Sbjct: 157 ASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFT 216

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +        +  Y  LI+GLC S  +  A      +    +  +V TY+ ++  LC DG
Sbjct: 217 EMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDG 276

Query: 355 KMDKARDLFLDMEAK 369
           +  +A +LF  M A+
Sbjct: 277 RSLQAMELFEMMMAR 291



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 84/179 (46%), Gaps = 14/179 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF  +   GC PN+ TY TLI GLC+      A+ L + M N  G      KP+ 
Sbjct: 279 LQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM-NLQG-----LKPDA 332

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTY-------NSLIHGFCYANDWNE 113
             Y  +I G C      +A     +M    I PN +T+       N ++ G C AN  + 
Sbjct: 333 GLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSR 391

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
           A  L++ M  +G+   V +   ++  LCK G+  +A +L++ ++  G  P+   +  L+
Sbjct: 392 AFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLI 450



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 7/190 (3%)

Query: 184 AEELFVSMESMGCKHNVFSYSILIN---GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           AE+L V M+   C   V S  IL++   GY +      +L ++ +M      P    Y T
Sbjct: 70  AEDLIVRMKIENC---VVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVT 126

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA-VELFRTLRIL 299
           +   L E +Q+  AFK +  M+  G+     +    I  LC+N   V+A +++F  +   
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D   Y  LI GLC+ GR+  A +LF  +        VVTY  +I+ LC    +D+A
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246

Query: 360 RDLFLDMEAK 369
                +M++K
Sbjct: 247 MRYLEEMKSK 256


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/381 (29%), Positives = 187/381 (49%), Gaps = 15/381 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN----------GE 51
           +A+ +F ++   GC PN  TY+ L++GLC+ G +  A  ++ +M   +          GE
Sbjct: 543 QASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGE 602

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
                 PN VTY  +IDGLCK   V  A+EL   M      PN + Y++LI GFC     
Sbjct: 603 HTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKL 662

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           + A+ +F  M   G  P V ++  +++ + K+ ++D A ++L  M++    PN   Y  +
Sbjct: 663 DNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAM 722

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG C  G   +A +L   ME  GC  NV +Y+ LI+G  K+ +++ +L L+++M+++G 
Sbjct: 723 IDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGC 782

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+ V Y  L         ++ A  L  EM++         Y + + G  K    + ++ 
Sbjct: 783 APNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKK--FIASLG 840

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL---PRGVLIADVVTYNIMIH 348
           L   L           Y  LID   K+GRL+ A EL + +      + I    TY  +I 
Sbjct: 841 LLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQ 900

Query: 349 ALCADGKMDKARDLFLDMEAK 369
           ALC   +++KA +L+ ++  K
Sbjct: 901 ALCLASQLEKAFELYSEITRK 921



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 163/369 (44%), Gaps = 57/369 (15%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
           C PN VTY T++ G  K+  +   K +   M +E  NPN   +NSL+H +C A D+  A 
Sbjct: 305 CIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAY 364

Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKN-------------------------------- 143
            L   M   G  P  V +N+ +  +C                                  
Sbjct: 365 KLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTA 424

Query: 144 ---------GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
                    GK D+A ++++LM++ G  P+   Y+ ++   C   +V +A  LF  M+S+
Sbjct: 425 NFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSV 484

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G   +V++Y+ILI+ +CK   IE A S + EM S G  P VV Y  L     +  QV +A
Sbjct: 485 GVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQA 544

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL----------------RI 298
             +F  M   G A +T  Y   +DGLCK G   +A E++  +                  
Sbjct: 545 SDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHT 604

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
                ++  Y  LIDGLCK+ ++  A EL   +       + + Y+ +I   C  GK+D 
Sbjct: 605 DSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDN 664

Query: 359 ARDLFLDME 367
           A+++F  M 
Sbjct: 665 AQEVFFRMS 673



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/293 (32%), Positives = 146/293 (49%), Gaps = 11/293 (3%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++   G  P V TY +LI+ + +     +A+ +  +M   +      C PN VT
Sbjct: 665 AQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESS------CTPNVVT 718

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +IDGLC+ G   KA +L   M+    NPNVVTY SLI G   +   + +  LF +M+
Sbjct: 719 YTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMI 778

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            QG  PN V++ V++N  C  G +DEA  LL  M Q         Y +++ GF  + +  
Sbjct: 779 TQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFI 836

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV---IYN 239
            +  L   +ES G       Y +LI+ + K   +E AL L+ EM+      ++     Y 
Sbjct: 837 ASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYT 896

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           +L   L    Q+E+AF+L+ E+ R GV  +  A+   I GL K     EA++L
Sbjct: 897 SLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQL 949



 Score =  141 bits (355), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 164/390 (42%), Gaps = 32/390 (8%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN---GNGEFGVVC--------- 56
           +L+ FG  P+  TYN L+  L   G   +   + +EM+       +F V C         
Sbjct: 197 RLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEG 256

Query: 57  --------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI 102
                         K +TV  T +I GL +    D+A     +M+  +  PNVVTY +L+
Sbjct: 257 RWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL 316

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
            GF         K +   MM++G  PN   FN +++  C       A +LL  M   G  
Sbjct: 317 AGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCP 376

Query: 163 PNAFVYNTLMDGFCLTGRVNR------AEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           P   VYN  +   C    +        AE+++  M +  C  N  + +      C   + 
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKF 436

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
           + A  +   M+ KG  PD   Y+ +   L E  +VE+AF LF EM+  GV  D + Y   
Sbjct: 437 DKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTIL 496

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           ID  CK G I +A   F  +  +     +  Y  L+    K+ ++  A ++F  +     
Sbjct: 497 IDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGC 556

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
             + +TY+ ++  LC  G+  KA +++  M
Sbjct: 557 APNTITYSALVDGLCKAGESQKACEVYAKM 586



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 22  YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
           Y  LI+   + G    AL L +EM   +    +  K    TYT++I  LC    ++KA E
Sbjct: 857 YGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKD---TYTSLIQALCLASQLEKAFE 913

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
           L+ ++  + + P +  +  LI G    N WNEA  L   M D+GV
Sbjct: 914 LYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGV 958


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/356 (30%), Positives = 182/356 (51%), Gaps = 6/356 (1%)

Query: 4    AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
             +LF+++R  G  PNV  YN++I+ LC       A+ + ++M      F   C P+ +T+
Sbjct: 1068 GSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQM------FASGCDPDIITF 1121

Query: 64   TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
             T+I GLC EG V KA+    +     +NPN ++Y  LIHGFC   +   A  L +EMM 
Sbjct: 1122 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMG 1181

Query: 124  QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            +G  P+VV+F  +++ L   GK+ EA  + E M +  V P+  +YN L+ G C    +  
Sbjct: 1182 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPA 1241

Query: 184  AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
            A+ +   M     + + F Y+ LI+G+ +++ +  A  ++  M  KG+ PD+V  N +  
Sbjct: 1242 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIK 1301

Query: 244  GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
            G  +   +  A      M++ G   D + Y T I G  K G +  A+     +   K + 
Sbjct: 1302 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 1361

Query: 304  DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++  Y+ LI+G CK+G    A  LF ++    L  +VVTY I+I +L    K+ +A
Sbjct: 1362 NVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRA 1417



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/391 (29%), Positives = 178/391 (45%), Gaps = 41/391 (10%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            GC P+V  YN LI+G CR G     L L  EM   NG       P  VTY ++I+ L K+
Sbjct: 1008 GCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMET-NGFL-----PTLVTYGSLINWLGKK 1061

Query: 74   GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
            G ++K   LFL+M+    +PNV  YNS+I   C      +A  +  +M   G  P++++F
Sbjct: 1062 GDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITF 1121

Query: 134  NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            N ++  LC  G + +A   L   I+  + PN   Y  L+ GFC+ G +  A +L V M  
Sbjct: 1122 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMG 1181

Query: 194  MGCKHNVFS-----------------------------------YSILINGYCKNKEIEG 218
             G   +V +                                   Y++LI+G CK + +  
Sbjct: 1182 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPA 1241

Query: 219  ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
            A ++  EML K ++PD  +Y TL  G      +  A K+F+ M+  GV  D  +    I 
Sbjct: 1242 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIK 1301

Query: 279  GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
            G C+ G + EA+     +R +    D   Y  +I G  K G L  A      + +     
Sbjct: 1302 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 1361

Query: 339  DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +VVTY+ +I+  C  G  D A  LF +M+A+
Sbjct: 1362 NVVTYSSLINGYCKTGDTDSAEGLFANMQAE 1392



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 157/350 (44%), Gaps = 8/350 (2%)

Query: 12   VFGCEPNVFTYNT--LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
            + G +     Y+T  L+ GLC        L L E        +G  C P+ V Y  +IDG
Sbjct: 969  MLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIE------ARWGAGCIPHVVFYNVLIDG 1022

Query: 70   LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
             C+ G + +   L  +M+     P +VTY SLI+      D  +   LF+EM  +G  PN
Sbjct: 1023 YCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPN 1082

Query: 130  VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            V  +N +++ LC      +A  +L+ M   G  P+   +NTL+ G C  G V +AE    
Sbjct: 1083 VQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR 1142

Query: 190  SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
                     N  SY+ LI+G+C   E+  A  L  EM+ +G  PDVV +  L  GL    
Sbjct: 1143 EAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAG 1202

Query: 250  QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
            +V  A  + ++M    V  D   Y   I GLCK   +  A  +   +     + D   Y 
Sbjct: 1203 KVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYA 1262

Query: 310  CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             LIDG  +S  L  A ++F  +    +  D+V+ N MI   C  G M +A
Sbjct: 1263 TLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEA 1312



 Score =  158 bits (399), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/370 (28%), Positives = 180/370 (48%), Gaps = 21/370 (5%)

Query: 1    MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
            M A+ L +++   G  P+V T+  LI+GL   G    AL + E+M            P+ 
Sbjct: 1170 MVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQ------VFPDV 1223

Query: 61   VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
              Y  +I GLCK+  +  AK +  +M ++N+ P+   Y +LI GF  + +  +A+ +F  
Sbjct: 1224 NIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEF 1283

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M  +GV P++VS N ++   C+ G M EA   +  M ++G  P+ F Y T++ G+   G 
Sbjct: 1284 MEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGN 1343

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            +N A      M    CK NV +YS LINGYCK  + + A  L++ M ++ + P+VV Y  
Sbjct: 1344 LNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTI 1403

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL------------CKNGYIVE 288
            L   LF+  +V RA   F+ M  +  + +       ++GL            C    +  
Sbjct: 1404 LIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTSCTPCVINSICCNTSEVHG 1463

Query: 289  AVELFRTLRILKYEL-DIR--AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
               L    + L +++ D R  AYN +I  LC+   L+ A +    + +   + + +T+  
Sbjct: 1464 KDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLS 1523

Query: 346  MIHALCADGK 355
            +++  C+ GK
Sbjct: 1524 LLYGFCSVGK 1533



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 142/305 (46%), Gaps = 5/305 (1%)

Query: 58   PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN-PNVVTYNSLIHGFCYANDWNEAKC 116
            P       ++      G + KA E+  +++++  + P V   N L+        W++A+ 
Sbjct: 905  PTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARK 964

Query: 117  LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
            L+ EM+ +    +  S  V++  LC   +++E  +L+E     G  P+   YN L+DG+C
Sbjct: 965  LYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYC 1024

Query: 177  LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
              G + R   L   ME+ G    + +Y  LIN   K  ++E   SL+ EM  +G  P+V 
Sbjct: 1025 RRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQ 1084

Query: 237  IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            IYN++   L       +A  +  +M   G   D   + T I GLC  G++ +A    R  
Sbjct: 1085 IYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR-- 1142

Query: 297  RILKYELDIR--AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
              ++ EL+    +Y  LI G C  G L +A +L   +       DVVT+  +IH L   G
Sbjct: 1143 EAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAG 1202

Query: 355  KMDKA 359
            K+ +A
Sbjct: 1203 KVSEA 1207



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 129/293 (44%)

Query: 77   DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            D A++L+ +M  ++   +  +   L+ G C      E   L       G  P+VV +NV+
Sbjct: 960  DDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVL 1019

Query: 137  MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
            ++  C+ G M     LL  M   G  P    Y +L++     G + +   LF+ M   G 
Sbjct: 1020 IDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGF 1079

Query: 197  KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
              NV  Y+ +I+  C  +    A+ +  +M + G  PD++ +NTL  GL     V +A  
Sbjct: 1080 SPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEH 1139

Query: 257  LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
               E  R  +  +  +Y   I G C  G ++ A +L   +    +  D+  +  LI GL 
Sbjct: 1140 FLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLV 1199

Query: 317  KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             +G++  A  +   +    +  DV  YN++I  LC    +  A+++  +M  K
Sbjct: 1200 VAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEK 1252


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/361 (31%), Positives = 185/361 (51%), Gaps = 11/361 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L M+++ F     V  YN LING CR         LF EMA           P+ +
Sbjct: 231 EARELSMRIKSF-----VPVYNALINGFCREHKMEEVFELFNEMAVEG------IDPDVI 279

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+T+I+ L + G V+ A  +  KM     +PNV T+ SL+ G+       EA  L+  M
Sbjct: 280 TYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G +PN V++N +++ LC  GKM EA  + + M + GV PN   Y+TL+DGF   G +
Sbjct: 340 IQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDL 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E++  M + GC  NV  Y+ +++  C+N     AL L   M +    P+ + +NT 
Sbjct: 400 VGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTF 459

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    + E A K+ ++M+++G A +   Y   +DGL       EA+++   +  ++ 
Sbjct: 460 IKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEI 519

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  YN ++ G C +G  K A ++   L  G    D +TYN +I+A C  G++  A  
Sbjct: 520 KSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQ 579

Query: 362 L 362
           L
Sbjct: 580 L 580



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 175/359 (48%), Gaps = 7/359 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E   LF ++ V G +P+V TY+T+IN L   G+  +AL +  +M      F   C PN  
Sbjct: 261 EVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKM------FLRGCSPNVH 314

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T+++ G    G + +A +L+ +M  E   PN V YN+LIHG C      EA  +  +M
Sbjct: 315 TFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKM 374

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN  +++ +++   K G +  AS +   MI  G  PN  VY  ++D  C     
Sbjct: 375 ERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMF 434

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A  L  +M +  C  N  +++  I G C + + E A+ + ++M   G  P+V  YN +
Sbjct: 435 NHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEV 494

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF   +   A ++  E++   + ++   Y T + G C  G    A+++   L +   
Sbjct: 495 LDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGT 554

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           + D   YN +I   CK G +K A +L  R   +G    DV TY  ++  +C    +D+A
Sbjct: 555 KPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEA 613



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 172/366 (46%), Gaps = 11/366 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F ++  FGC+P+V  YN +++ L       +   ++  M     E       N  
Sbjct: 126 QALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIEL------NVY 179

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++  LCK   VD A++L  +M  +   P+ V+Y +++   C      EA+ L +  
Sbjct: 180 TYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMR- 238

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
               ++  V  +N ++N  C+  KM+E   L   M   G+ P+   Y+T+++     G V
Sbjct: 239 ----IKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNV 294

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M   GC  NV +++ L+ GY     +  AL L++ M+ +G +P+ V YNTL
Sbjct: 295 EMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTL 354

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    ++  A  +  +M+R+GV  +   Y T IDG  K G +V A E++  +     
Sbjct: 355 IHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGC 414

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y C++D LC++     A  L  ++  G    + +T+N  I  LC  GK + A  
Sbjct: 415 LPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMK 474

Query: 362 LFLDME 367
           +   M 
Sbjct: 475 VLNQMR 480



 Score =  147 bits (371), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 180/384 (46%), Gaps = 45/384 (11%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII---------D 68
           N+   + ++N L    + ++AL+ F+ +AN N       K   +TYTT+I         D
Sbjct: 36  NLLKESEVLNKLKNEPNILLALHFFKSIANSNS-----FKHTPLTYTTMIKRLGYERDID 90

Query: 69  GL-------------CKE-------------GFVDKAKELFLKMKDENINPNVVTYNSLI 102
           G+             C E             G  ++A + F ++ +    P+V  YN ++
Sbjct: 91  GIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVL 150

Query: 103 HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
                 N +     ++  M   G++ NV ++N+++  LCKN ++D A +LL  M   G  
Sbjct: 151 DALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCI 210

Query: 163 PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL 222
           P+A  Y T++   C  G+V  A EL     SM  K  V  Y+ LING+C+  ++E    L
Sbjct: 211 PDAVSYTTVVSSMCRLGKVEEAREL-----SMRIKSFVPVYNALINGFCREHKMEEVFEL 265

Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
           ++EM  +GI PDV+ Y+T+   L E+  VE A  +  +M   G + +   + + + G   
Sbjct: 266 FNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFM 325

Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
            G + EA++L+  +     E +  AYN LI GLC  G++  A  + + + R  +  +  T
Sbjct: 326 GGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETT 385

Query: 343 YNIMIHALCADGKMDKARDLFLDM 366
           Y+ +I      G +  A +++  M
Sbjct: 386 YSTLIDGFAKAGDLVGASEIWNKM 409



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 138/281 (49%), Gaps = 7/281 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA ++  K+   G  PN  TY+TLI+G  + G  + A  ++ +M   NG     C PN 
Sbjct: 365 VEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMIT-NG-----CLPNV 418

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V YT ++D LC+    + A  L   M + N  PN +T+N+ I G C +     A  +  +
Sbjct: 419 VVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQ 478

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G  PNV ++N +++ L    +  EA +++  + ++ ++ N   YNT++ GFC  G 
Sbjct: 479 MRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGM 538

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK-PDVVIYN 239
              A ++   +   G K +  +Y+ +I  YCK  E++ A+ L   +  KG   PDV  Y 
Sbjct: 539 FKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYT 598

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
           +L  G+     V+ A    D+M   G+  +   +   + GL
Sbjct: 599 SLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 131/246 (53%), Gaps = 7/246 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A+ ++ K+   GC PNV  Y  +++ LCR      AL+L E MANGN      C PNT+T
Sbjct: 402 ASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGN------CPPNTIT 455

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + T I GLC  G  + A ++  +M+     PNV TYN ++ G   A    EA  +  E+ 
Sbjct: 456 FNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIE 515

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  ++ N+V++N I++  C  G    A ++   ++  G +P++  YNT++  +C  G V 
Sbjct: 516 EMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVK 575

Query: 183 RAEELFVSMESMGCKH-NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            A +L   +   G  + +VF+Y+ L+ G C    ++ A+    +M+++GI P+   +N L
Sbjct: 576 TAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNAL 635

Query: 242 FIGLFE 247
             GLF 
Sbjct: 636 VRGLFS 641



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 113/217 (52%), Gaps = 7/217 (3%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C PN  T+NT I GLC +G T  A+ +  +M     ++G  C PN  TY  ++DGL    
Sbjct: 449 CPPNTITFNTFIKGLCCSGKTEWAMKVLNQMR----QYG--CAPNVTTYNEVLDGLFNAK 502

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
              +A ++  ++++  I  N+VTYN+++ GFC+A  +  A  +  +++  G +P+ +++N
Sbjct: 503 RTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYN 562

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGV-RPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
            ++   CK G++  A +L++ + + G   P+ F Y +L+ G C    V+ A      M +
Sbjct: 563 TVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMIN 622

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
            G   N  +++ L+ G        G + +   +L+ G
Sbjct: 623 EGICPNRATWNALVRGLFSKLGHLGPIHIVDNILANG 659



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 37/181 (20%)

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
            + +E + C  ++F   I+IN Y +    E AL  +  +   G KP V IYN +   L  
Sbjct: 98  LMKLEGISCNEDLFV--IVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLS 155

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
            ++ +    +++ M+R G+                                   EL++  
Sbjct: 156 ENKFQMINGIYNNMKRDGI-----------------------------------ELNVYT 180

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           YN L+  LCK+ R+  A +L   +     I D V+Y  ++ ++C  GK+++AR+L + ++
Sbjct: 181 YNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIK 240

Query: 368 A 368
           +
Sbjct: 241 S 241



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/142 (21%), Positives = 66/142 (46%)

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           S   K   + Y T+   L     ++    L   M+  G++ +   +   I+   + G   
Sbjct: 66  SNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAE 125

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A++ F  +     +  ++ YN ++D L    + ++   ++ ++ R  +  +V TYN+++
Sbjct: 126 QALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLL 185

Query: 348 HALCADGKMDKARDLFLDMEAK 369
            ALC + ++D AR L  +M  K
Sbjct: 186 KALCKNDRVDAARKLLAEMSYK 207


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 193/377 (51%), Gaps = 16/377 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF---------- 52
           A  LF  +   GC PNV TY  LI+G C++G+   A  ++  M  G+ +           
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARM-RGDADIPDVDMYFKIK 636

Query: 53  -GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDW 111
             V  KPN VTY  ++DGLCK   V  A++L   M  +   PN + Y++LI GFC A   
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
           +EA+ +F +M++ G  PNV +++ +++ L K+ ++D   ++L  M++    PN  +Y  +
Sbjct: 697 DEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG     + + A +L + ME  GCK NV +Y+ +I+G+ K  +++  L L+ EM SKG 
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
            P+ V Y  L         ++ A+ L +EM++        +Y   I+G  K  +I+ ++ 
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-KREFIL-SLG 874

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG--VLIADVVTYNIMIHA 349
           L   +        I  Y  LID   K+GRL++A EL + +      + A    Y  +I++
Sbjct: 875 LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYS 934

Query: 350 LCADGKMDKARDLFLDM 366
                K+  A +LF DM
Sbjct: 935 FSYASKIGHAFELFYDM 951



 Score =  177 bits (448), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 109/370 (29%), Positives = 181/370 (48%), Gaps = 22/370 (5%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+  TY+ +I  LC       A  LF+EM       GVV  P+  TYT +ID   K 
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT----GVV--PDVYTYTILIDCFSKA 537

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G + +A     +M  +   P VVTY +LIH +  A   + A  LF  M+ +G  PNV+++
Sbjct: 538 GIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITY 597

Query: 134 NVIMNELCKNGKMDEASRLLELMI----------------QIGVRPNAFVYNTLMDGFCL 177
             +++  CK+G +++A ++   M                  +  +PN   Y  L+DG C 
Sbjct: 598 TALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDGLCK 657

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             +V  A +L  +M   GC+ N   Y  LI+G+CK  +++ A  ++ +M+  G  P+V  
Sbjct: 658 AHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYT 717

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y++L   LF+  +++   K+  +M  +  A +   Y   IDGL K     EA +L   + 
Sbjct: 718 YSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMME 777

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
               + ++  Y  +IDG  K+G++    ELFR +       + VTY ++I+  CA G +D
Sbjct: 778 EKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLD 837

Query: 358 KARDLFLDME 367
           +A  L  +M+
Sbjct: 838 EAYALLEEMK 847



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 174/385 (45%), Gaps = 20/385 (5%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTI--VALNLFEEMANGNGEFGVVCKPNT 60
           A  L  K+    C+P    YN LI  +C  G     V   L E+  N     G V   N 
Sbjct: 397 AYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVL--NK 454

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V   +    LC  G  +KA ++  +M      P+  TY+ +I   C A+    A  LF E
Sbjct: 455 VNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKE 514

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   GV P+V ++ ++++   K G + +A   L+ M++ G  P    Y TL+  +    +
Sbjct: 515 MKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKK 574

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI--------- 231
           V+ A ELF  M + GC  NV +Y+ LI+GYCK+  IE A  +Y+ M              
Sbjct: 575 VSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFK 634

Query: 232 -------KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
                  KP+VV Y  L  GL + H+V+ A  L + M   G   +T  Y   IDG CK  
Sbjct: 635 IKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAA 694

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            + EA E+F  +    Y  ++  Y+ LID L K  RL +  ++   +       ++V Y 
Sbjct: 695 KLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYT 754

Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
            MI  L    K D+A  L L ME K
Sbjct: 755 EMIDGLSKVAKTDEAYKLMLMMEEK 779



 Score =  142 bits (357), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 165/370 (44%), Gaps = 21/370 (5%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           +L+ FG +P   TYN L+    R      A  +  EM+    E G+     T+ +     
Sbjct: 231 RLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS----ELGLSMDEFTLGF--FAQ 284

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
            LCK G   K +E    ++ E+  PN + YN +I G C A+ + EA      M      P
Sbjct: 285 ALCKVG---KWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIP 341

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           NV ++ +++       ++    R+L +MI  G  P+  ++N+L+  +C +   + A +L 
Sbjct: 342 NVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLL 401

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSL------YSEMLSKGI---KPDVVIYN 239
             ME   CK     Y+ILI   C   E+ G ++       Y+EMLS G    K +VV + 
Sbjct: 402 KKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFA 461

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
               G     + E+A+K+  EM  +G   DT  Y   I  LC    +  A  LF+ ++  
Sbjct: 462 RCLCGF---GKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGT 518

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               D+  Y  LID   K+G +K A      + R      VVTY  +IHA     K+  A
Sbjct: 519 GVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVA 578

Query: 360 RDLFLDMEAK 369
            +LF  M AK
Sbjct: 579 NELFELMIAK 588



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 147/326 (45%), Gaps = 33/326 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
           +A  L   + V GCEPN   Y+ LI+G C+      A  +F +M        V       
Sbjct: 663 DARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLI 722

Query: 56  -----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
                                  C PN V YT +IDGL K    D+A +L L M+++   
Sbjct: 723 DRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCK 782

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           PNVVTY ++I GF  A   ++   LF EM  +G  PN V++ V++N  C  G +DEA  L
Sbjct: 783 PNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYAL 842

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           LE M Q     +   Y  +++G+     ++    L   +E  G    +  Y +LI+ + K
Sbjct: 843 LEEMKQTYWPKHVSSYCKVIEGYKREFILSLG--LLEEVEKNGSAPIILLYKVLIDNFVK 900

Query: 213 NKEIEGALSLYSEMLSKGIKPDVV--IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
              +E AL L+ E++S  +       +Y +L        ++  AF+LF +M R GV  D 
Sbjct: 901 AGRLEVALELHKEVISASMSMAAKKNLYTSLIYSFSYASKIGHAFELFYDMIRDGVIPDL 960

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTL 296
             +   + GL +     EA++L  +L
Sbjct: 961 GTFVHLLMGLIRVRRWEEALQLSDSL 986



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/318 (24%), Positives = 136/318 (42%), Gaps = 27/318 (8%)

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I   C+ G  + A E   ++KD    P  +TYN+L+  F  A+  + A+ +  EM + G
Sbjct: 212 LIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELG 271

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           +  +  +       LCK GK  EA  L+E   +    PN  +YN ++ G C       A 
Sbjct: 272 LSMDEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAM 328

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           +    M S  C  NV +Y IL+ G    K++     + S M+++G  P   I+N+L    
Sbjct: 329 DFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAY 388

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +      A+KL  +M++         Y   I  +C  G +   V          +EL  
Sbjct: 389 CKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPV---------TFELAE 439

Query: 306 RAYNCLIDG---------------LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           +AYN ++                 LC  G+ + A+++   +     + D  TY+ +I  L
Sbjct: 440 KAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFL 499

Query: 351 CADGKMDKARDLFLDMEA 368
           C   +++ A  LF +M+ 
Sbjct: 500 CNASRVENAFFLFKEMKG 517



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/230 (24%), Positives = 98/230 (42%), Gaps = 15/230 (6%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            NV++ + C+NG  + A   L  +   G +P    YN L+  F    +++ A+ +   M 
Sbjct: 209 LNVLIRKCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMS 268

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            +G   + F+        CK  +   ALSL  +   +   P+ ++YN +  GL E    E
Sbjct: 269 ELGLSMDEFTLGFFAQALCKVGKWREALSLIEK---EDFVPNTILYNKMISGLCEASFFE 325

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL------DIR 306
            A    + M+      +   YR  + G C N       +L R  RIL   +         
Sbjct: 326 EAMDFLNRMRSTSCIPNVQTYRILLCG-CLN-----KKQLGRCKRILSMMIAEGCYPSYT 379

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
            +N L+   CKS     A++L + + +       V YNI+I ++C+ G++
Sbjct: 380 IFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGEL 429


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 179/353 (50%), Gaps = 6/353 (1%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V TY T+++G C  G    A+ L +EMA    E       N   YT++I  LC +G V
Sbjct: 285 PDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLES------NATVYTSVIALLCNKGQV 338

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
             A  +   M    +  + V + ++I GFC   D   A+ LF EM  +G+  + V+   +
Sbjct: 339 SDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTAL 398

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N LC+ G++ EA R+L+ M+  G+  +   Y  L+DG+C  G +  A  +   M     
Sbjct: 399 INGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRV 458

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV +Y+ L +G CK  ++  A  L  EM +KG++ +V  YN+L  GL +   +E+A +
Sbjct: 459 APNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMR 518

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           +  EM+  G   D + Y T ID LCK+G    A  + + +     +  I  YN L++G C
Sbjct: 519 IMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFC 578

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            SGR++   +L   +    +  +VVTYN ++   C D  M    +++  M ++
Sbjct: 579 MSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQ 631



 Score =  182 bits (462), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 184/366 (50%), Gaps = 17/366 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           + +A L  +LR +G  P+  + N +++ L        A+ LF E+ + N     VC    
Sbjct: 210 LPSAELLRRLRQYGLSPSPESCNAVLSRLPLDE----AIALFRELPDKN-----VC---- 256

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            ++  ++  L   G +  A + F +M      P+VVTY +++HG+C   +   A  L  E
Sbjct: 257 -SHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLLDE 312

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M  +G++ N   +  ++  LC  G++ +A R+LE M   GV  +A V+ T++ GFC  G 
Sbjct: 313 MAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGD 372

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A  LF  M+  G   +  +++ LING C+  E++ A  +  EM+ KG+  DVV Y  
Sbjct: 373 LAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTV 432

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +   +  AF++ +EM    VA +   Y    DGLCK G +  A EL   +    
Sbjct: 433 LIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKG 492

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            EL++  YN LI+GLCK G L+ A  +   +       DV TY  +I  LC  G+ D+A 
Sbjct: 493 LELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAH 552

Query: 361 DLFLDM 366
           ++  +M
Sbjct: 553 NMLQEM 558



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 176/357 (49%), Gaps = 6/357 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G E N   Y ++I  LC  G    AL + E+M       GV    + V 
Sbjct: 306 AVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMT----MHGVAL--DAVV 359

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           +TT+I G C +G +  A+ LF +M+   +  + VT+ +LI+G C A +  EA  +  EM+
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           D+G+  +VV++ V+++  CK G M EA R+   M+   V PN   Y  L DG C  G V 
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M + G + NV++Y+ LING CK   +E A+ + +EM + G + DV  Y TL 
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
             L +  + +RA  +  EM   G+      Y   ++G C +G +    +L   +      
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR 599

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++  YN L+   C    +K   E+++ +    +  +  TYNI+I   C    M +A
Sbjct: 600 PNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEA 656



 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 184/365 (50%), Gaps = 6/365 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +   + + G   +   + T+I+G C  G    A  LFEEM     + G+    + V
Sbjct: 340 DALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQ----KRGLAA--DRV 393

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+T +I+GLC+ G + +A  +  +M D+ ++ +VVTY  LI G+C   +  EA  +  EM
Sbjct: 394 THTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM 453

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + + V PNVV++  + + LCK G +  A+ LL  M   G+  N + YN+L++G C  G +
Sbjct: 454 VGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNL 513

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A  +   ME+ G + +V++Y+ LI+  CK+ E + A ++  EML KGIKP +  YN L
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     +VE   KL + M    V  +   Y + +   C +  +    E+++ +   + 
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV 633

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YN LI G CK+  +K A    + +    L     +Y+ +I  L    K  +AR 
Sbjct: 634 APNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARV 693

Query: 362 LFLDM 366
            F  M
Sbjct: 694 FFDKM 698



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 145/262 (55%), Gaps = 6/262 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV TY  L +GLC+ G    A  L  EM N   E       N  TY ++I+GLCK G +
Sbjct: 460 PNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLEL------NVYTYNSLINGLCKFGNL 513

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           ++A  +  +M+      +V TY +LI   C + +++ A  +  EM+D+G++P++ ++NV+
Sbjct: 514 EQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVL 573

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           MN  C +G+++   +LLE M++  VRPN   YN+LM  +C+   +    E++  M S   
Sbjct: 574 MNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEV 633

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             N  +Y+ILI G+CK + ++ AL  + EM+ KG++     Y+ L   L +  +   A  
Sbjct: 634 APNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARV 693

Query: 257 LFDEMQRHGVAADTWAYRTFID 278
            FD+M+  G+ A+   Y  ++D
Sbjct: 694 FFDKMRNEGLTAEPDVYSFYMD 715



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 153/296 (51%), Gaps = 6/296 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++   G + +V TY  LI+G C+ G+ + A  +  EM       G    PN V
Sbjct: 410 EADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEM------VGRRVAPNVV 463

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT + DGLCK+G V  A EL  +M ++ +  NV TYNSLI+G C   +  +A  +  EM
Sbjct: 464 TYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEM 523

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G + +V ++  +++ LCK+G+ D A  +L+ M+  G++P+   YN LM+GFC++GRV
Sbjct: 524 EAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRV 583

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              ++L   M     + NV +Y+ L+  YC +K ++    +Y  M S+ + P+   YN L
Sbjct: 584 EGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNIL 643

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             G  +   ++ A     EM   G+     +Y   I  L K     EA   F  +R
Sbjct: 644 IKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMR 699



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 127/249 (51%), Gaps = 8/249 (3%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G E NV+TYN+LINGLC+ G+   A+ +  EM A G+       + +  TYTT+ID LCK
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGH-------RTDVYTYTTLIDTLCK 544

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G  D+A  +  +M D+ I P++ TYN L++GFC +      K L   M+++ V+PNVV+
Sbjct: 545 SGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVT 604

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +M + C +  M   + + + M    V PN   YN L+ G C    +  A      M 
Sbjct: 605 YNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMI 664

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G +    SYS LI    K K+   A   + +M ++G+  +  +Y+      F    +E
Sbjct: 665 EKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLE 724

Query: 253 RAFKLFDEM 261
               L DE+
Sbjct: 725 STITLCDEL 733



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/226 (28%), Positives = 112/226 (49%), Gaps = 6/226 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +  ++   G   +V+TY TLI+ LC++G    A N+ +EM +     G+  KP+  
Sbjct: 515 QAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK----GI--KPSIA 568

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +++G C  G V+  K+L   M ++N+ PNVVTYNSL+  +C   +      ++  M
Sbjct: 569 TYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGM 628

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             Q V PN  ++N+++   CK   M EA    + MI+ G+R  A  Y+ L+       + 
Sbjct: 629 HSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKF 688

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           + A   F  M + G       YS  ++       +E  ++L  E++
Sbjct: 689 SEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELV 734


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 179/368 (48%), Gaps = 15/368 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  ++  +GC P+V  Y+TLING    GH   AL+L   M         +CKPNTV
Sbjct: 243 RAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---------LCKPNTV 293

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   + GLC     +   EL  +M  +  +PN  T++ LI   C  N  + A  +  +M
Sbjct: 294 CYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQM 353

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+ V++N+I+N L + G++D+A RLL  M+    +P+A  +N ++ GFC   R 
Sbjct: 354 EKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERW 410

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M    C     +++ILI+  C+N  +  A  ++ +M      PD+V Y++L
Sbjct: 411 HDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSL 470

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  E   VE A +LF  M       D ++Y   + GLC+     +A EL   +     
Sbjct: 471 LNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDC 527

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   +N LI+ LC+ G +  A E+   +P      D+ TYN +I+     G++D A  
Sbjct: 528 PPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALK 587

Query: 362 LFLDMEAK 369
           L   M  K
Sbjct: 588 LLSTMSCK 595



 Score =  177 bits (449), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 179/337 (53%), Gaps = 15/337 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN  T++ LI+ LC+      A+ + E+M     ++G  C+P+TV Y  II+ L + 
Sbjct: 322 GCSPNEATFSMLISSLCQNNLVDSAVEVLEQME----KYG--CEPDTVNYNIIINSLSER 375

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A  L   M      P+ + +N+++ GFC A  W++A  L  +M         ++F
Sbjct: 376 GRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTF 432

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC+NG ++ A+++ E M +    P+   Y++L++GF   G V  A +LF    S
Sbjct: 433 NILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RS 489

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           M CK ++FSY+ ++ G C+    E A  L +EM+ K   P+ V +N L   L +   V+R
Sbjct: 490 MPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDR 549

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++ ++M  +G   D + Y   I+G  + G + +A++L  T+     + D  +YN  + 
Sbjct: 550 AIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSC---KPDAISYNSTLK 606

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           GLC++ R + A EL   + R     + VT+    H L
Sbjct: 607 GLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLL 643



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 188/385 (48%), Gaps = 50/385 (12%)

Query: 17  PNVFTYNTLINGL-----------------------------------CRTGHTIVALNL 41
           P+ +TYNT++ GL                                   C+ G    A+ L
Sbjct: 188 PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 247

Query: 42  FEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
            ++M      +G  C P+ V Y+T+I+G  ++G VD+A +L   M      PN V YN+ 
Sbjct: 248 LDQMP----RYG--CTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           + G C A  W +   L  EM+ +G  PN  +F+++++ LC+N  +D A  +LE M + G 
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   YN +++     GRV+ A  L   + SM CK +   ++ ++ G+C+ +    A  
Sbjct: 359 EPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDASE 415

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L ++M         + +N L   L +   V  A ++F++M R+    D   Y + ++G  
Sbjct: 416 LIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 475

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           + G +  A++LFR+   +  + DI +YN ++ GLC++ R + A EL   +       + V
Sbjct: 476 EQGLVEVAIQLFRS---MPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 532

Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
           T+NI+I++LC  G +D+A ++   M
Sbjct: 533 TFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 176/346 (50%), Gaps = 16/346 (4%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           ++NTL+ G CR G    A  +        G        N VTYT +IDG C+ G +D A 
Sbjct: 126 SHNTLVAGYCRDGRLADAERVL-------GAARATGAANVVTYTALIDGYCRSGRLDDAL 178

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            L   M    + P+  TYN+++ G C A  W EA+ L  EM+     PN V+F   +   
Sbjct: 179 RLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSF 235

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+NG +D A +LL+ M + G  P+  +Y+TL++GF   G V++A +L   + +M CK N 
Sbjct: 236 CQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNT 292

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
             Y+  + G C  +  E    L +EM+ KG  P+   ++ L   L + + V+ A ++ ++
Sbjct: 293 VCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQ 352

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+++G   DT  Y   I+ L + G + +A+ L  ++     + D   +N ++ G C++ R
Sbjct: 353 MEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVC---KPDALGFNAVLKGFCRAER 409

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              A EL   + R       +T+NI+I  LC +G ++ A  +F  M
Sbjct: 410 WHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQM 455



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 129/237 (54%), Gaps = 12/237 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ L  ++    C     T+N LI+ LC+ G    A  +FE+M          C P+ V
Sbjct: 412 DASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPR------YRCTPDIV 465

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++++G  ++G V+ A +LF  M      P++ +YN+++ G C A  W +A  L  EM
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN V+FN+++N LC+ G +D A  +LE M   G  P+ F YN L++GF   GR+
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           + A +L   + +M CK +  SY+  + G C+ +  + A  L +EML     P+ V +
Sbjct: 583 DDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 131/272 (48%), Gaps = 43/272 (15%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           +S N+++ +LC  G++ +A R+L+ +       +A  +NTL+ G+C  GR+  AE +  +
Sbjct: 91  ISCNILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL----- 245
             + G   NV +Y+ LI+GYC++  ++ AL L + M    + PD   YNT+  GL     
Sbjct: 150 ARATGAA-NVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIAKK 205

Query: 246 ------------------------FEIHQ------VERAFKLFDEMQRHGVAADTWAYRT 275
                                    +I        ++RA +L D+M R+G   D   Y T
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+G  + G++ +A++L  T+     + +   YN  + GLC + R +   EL   + R  
Sbjct: 266 LINGFSEQGHVDQALDLLNTMLC---KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +  T++++I +LC +  +D A ++   ME
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQME 354


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 195/397 (49%), Gaps = 41/397 (10%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL   +  F CEP+V++YN +IN  C  G +  AL+L   M   NG     CKP+  T+ 
Sbjct: 278 ALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIE-NG-----CKPSIATFC 331

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           TIID  CKEG V+ A++ F +++D  ++ N + YN +I G+  A D ++A  LF EM  +
Sbjct: 332 TIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTK 391

Query: 125 GVQPNVVSFN-----------------------------------VIMNELCKNGKMDEA 149
            + P+ ++FN                                   V +  LC  G+ DEA
Sbjct: 392 DIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEA 451

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
            +LLE +++ G+ P+   +N+++  +   G   RA   +  M   G   +  + S L+  
Sbjct: 452 MKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLIS 511

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             +   ++ A     +M+ KG     + +  L  G F I  V  A  L++EM+  GV  D
Sbjct: 512 LVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPD 571

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
             A+  FI+GLC +G + +A ++F  +    +  +   YN LI G CK G+L  A +L R
Sbjct: 572 AVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVR 631

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +  L+ D+ T N++I  LC  G+M  A + F+DM
Sbjct: 632 EMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDM 668



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 170/338 (50%), Gaps = 9/338 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVA-LNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           FG  P+  T ++L+  L R G    A + L++ +  G   F V      + +T ++DG  
Sbjct: 496 FGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKG---FPV----TNMAFTVLLDGYF 548

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           + G V+ A+ L+ +MK   + P+ V + + I+G C +    +A  +F +M+ +G  PN  
Sbjct: 549 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNF 608

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
            +N ++   CK GK++EA +L+  M + G+ P+ F  N ++ G C  GR+  A E F+ M
Sbjct: 609 VYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDM 668

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
             MG   ++ +Y+ LI+GYCK  ++ GA  L  +M   G +PD+  YN    G   + ++
Sbjct: 669 CRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKI 728

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            RA  + +E+   G+  +T  Y T I+ +C N  +  A+ L   L  + +  +    N L
Sbjct: 729 NRAVMILEELISVGIVPNTVTYNTMINAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVL 787

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           +   CK G  + A    + L    L  D  T+ +M  A
Sbjct: 788 LSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRA 825



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 169/358 (47%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   L   G  P+V  +N++I      G    A   +  M     +FG+   P++ 
Sbjct: 450 EAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMV----KFGLT--PSSS 503

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T ++++  L ++G +D+A      M D+      + +  L+ G+      N A+ L+ EM
Sbjct: 504 TCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEM 563

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+ V+F   +N LC +G M +A  +   M++ G  PN FVYN+L+ GFC  G++
Sbjct: 564 KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKL 623

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A +L   M   G   ++F+ +++I G CK   ++ A+  + +M   G+ PD+V YNTL
Sbjct: 624 NEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTL 683

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V  A  L  +M   G   D   Y   I G C    I  AV +   L  +  
Sbjct: 684 IDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGI 743

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +   YN +I+ +C    L  A  L   L +   + + VT N+++   C  G  +KA
Sbjct: 744 VPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKA 800



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 167/364 (45%), Gaps = 8/364 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA ++   RV+  E +    +TL+    ++     AL +  +M     E GV   PN   
Sbjct: 173 AAFMWEGHRVY--ESDFSVLDTLMQAFVKSEMHFEALEILSKMR----EVGVT--PNPSA 224

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            + +   L + G      +LF  +  +   PN  T+N LI  FC        + L   M 
Sbjct: 225 ISILFRLLIRAGDCGAVWKLFGDVVRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMG 284

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
               +P+V S+N+++N  C  G+   A  LL LMI+ G +P+   + T++D FC  G V 
Sbjct: 285 KFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVE 344

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A + F  +E MG   N   Y+I+I+GY K ++I  A  L+ EM +K I PD + +NTL 
Sbjct: 345 LARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLV 404

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G +   + E   +L  ++   G+  D+      + GLC  G   EA++L   L      
Sbjct: 405 AGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIP 464

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
             + A+N +I     +G  + A+  +  + +  L     T + ++ +L   G +D+A   
Sbjct: 465 PSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIA 524

Query: 363 FLDM 366
             DM
Sbjct: 525 LYDM 528



 Score =  120 bits (301), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 8/228 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   G  PN F YN+LI G C+ G    AL L  EM N  G       P+  
Sbjct: 590 DAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREM-NKRGLL-----PDIF 643

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   II GLCK+G +  A E F+ M    ++P++VTYN+LI G+C A D   A  L ++M
Sbjct: 644 TVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKM 703

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G +P++ ++N+ ++  C   K++ A  +LE +I +G+ PN   YNT+++  C    +
Sbjct: 704 SDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC-NVIL 762

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           + A  L   +  M    N  + ++L++ +CK    E A+  + + LS+
Sbjct: 763 DHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI-FWGQKLSE 809



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 125/271 (46%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           ++L+  F  +    EA  +  +M + GV PN  + +++   L + G      +L   +++
Sbjct: 191 DTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 250

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN F +N L+  FC  G     E L   M    C+ +V+SY+I+IN  C   +   
Sbjct: 251 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSY 310

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL L + M+  G KP +  + T+     +   VE A K FDE++  G++ +T  Y   I 
Sbjct: 311 ALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMIS 370

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G  K   I +A  LF  +R      D   +N L+ G  + G+ +    L R L    L+ 
Sbjct: 371 GYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLH 430

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D    ++ +  LC  G+ D+A  L  ++  K
Sbjct: 431 DSSLCDVTVAGLCWAGRYDEAMKLLENLLEK 461


>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 181/350 (51%), Gaps = 6/350 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
            + + +++G C+ G    A  L +EM       GV  K N   Y  ++D   ++    + 
Sbjct: 134 LSASVVVDGFCKAGRMDDARRLLDEMPR----HGV--KLNACCYNPLLDTYTRQKNDARV 187

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            E+  +M+   + P V TY  L+ G   A D ++ + +F E+  + V  +V  ++ ++N 
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINA 247

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
            C+ G +  AS + +  +  G+ PN   Y  L++GFC  G++  AE L   M+  G  HN
Sbjct: 248 YCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHN 307

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
              ++ +I+GYC++  ++ AL + + M   GI+ DV  YNTL  GL  ++++E A KL  
Sbjct: 308 QIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLH 367

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
            M  +GV ++  +Y T I    K G +VEA  LFR +        +  YN +IDG  KSG
Sbjct: 368 IMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSG 427

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ++ A    + + +  L+ DV TY  ++H  C +GK+D A  LF +M+ +
Sbjct: 428 SIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQR 477



 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 182/355 (51%), Gaps = 6/355 (1%)

Query: 4   AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTY 63
           A +  ++   G EP V TY  L++GL   G      ++F+E+   N         +   Y
Sbjct: 188 AEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKRKN------VAGDVYFY 241

Query: 64  TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           + +I+  C+ G V +A E+F +     I PN  TY +LI+GFC       A+ L  +M  
Sbjct: 242 SAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQL 301

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
           +GV  N + FN +++  C++G +D+A  +  +M ++G++ + + YNTL  G C   R+  
Sbjct: 302 RGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMED 361

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
           A++L   M   G + N  SY+ LI+ + K  ++  A  L+ +M  KG +P VV YN +  
Sbjct: 362 AKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMID 421

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           G  +   +  A +   EM++ G+  D + Y   + G C NG +  A+ LF  ++    + 
Sbjct: 422 GYIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKP 481

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
           ++ AY  LI GL K GR + A++ + ++    L  D   Y++++ +L  D + D+
Sbjct: 482 NVVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKDE 536



 Score =  174 bits (440), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 185/371 (49%), Gaps = 14/371 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G + N   YN L++   R  +      + +EM +G  E      P   
Sbjct: 151 DARRLLDEMPRHGVKLNACCYNPLLDTYTRQKNDARVAEVLKEMESGGVE------PTVG 204

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT ++DGL   G + K + +F ++K +N+  +V  Y+++I+ +C A +   A  +F E 
Sbjct: 205 TYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYFYSAVINAYCRAGNVRRASEVFDEC 264

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++PN  ++  ++N  CK G+++ A  LL  M   GV  N  ++NT++DG+C  G V
Sbjct: 265 VGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMV 324

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           ++A E+   ME MG + +V++Y+ L  G C+   +E A  L   M   G++ + V Y TL
Sbjct: 325 DKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESNYVSYTTL 384

Query: 242 FIGLFEIHQVE----RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
                 IH  E     A +LF +M+  G       Y   IDG  K+G I EA    + + 
Sbjct: 385 I----SIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEME 440

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  Y  L+ G C +G++ +A  LF  + +     +VV Y  +I  L  +G+ +
Sbjct: 441 KKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSE 500

Query: 358 KARDLFLDMEA 368
           +A   + +M A
Sbjct: 501 EAFQFYDNMLA 511



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 6/148 (4%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF  +   G  P+V TYN +I+G  ++G    A    +EM     + G+V  P+ 
Sbjct: 395 VEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKKEME----KKGLV--PDV 448

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  ++ G C  G VD A  LF +MK     PNVV Y +LI G        EA   +  
Sbjct: 449 YTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEGRSEEAFQFYDN 508

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           M+  G+ P+   +++++  L  + + DE
Sbjct: 509 MLAAGLTPDDTLYSMLVGSLHTDKRKDE 536


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 188/395 (47%), Gaps = 30/395 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  LF ++   G +  V TYN +   LC+ G    A  + +EM                
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 47  ----NGNGEFGVVC-----------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
                G G   +V            KPN    T  I  LCK G  ++A E++ ++  + +
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
             NV T N+LIHG C  N+  EA  +   M++ GV+ + +++N+++   CK  KMDEA +
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           L + MI+ G +P+ F +N  +  +C  G+V     L   M+S G K ++ +Y  +I+GYC
Sbjct: 514 LRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYC 573

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
           K K++  A    +E++  G++P+ VIYN L  G      +  A  + D M+ +G+     
Sbjct: 574 KAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPV 633

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            Y + +  +C  G + E   +F    +   EL +  Y  +I G CK G++  A   F+ +
Sbjct: 634 TYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEM 693

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
               +  + +TY  ++ A    G  ++A  LF +M
Sbjct: 694 HSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEM 728



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 180/365 (49%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           AA  F++L   G  P++ T + L+  L   G   VA  +F EM +G         P+  T
Sbjct: 159 AADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGK-----TVAPDVHT 213

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           YT +I  LC+ G +D A  +  +++   I P VVTYN L+   C +    EA  L   M+
Sbjct: 214 YTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMV 273

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +  V+P++V+F ++++ L +  +  E   +L+ M   G+ PN  +YN ++   C  G  +
Sbjct: 274 EGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCS 333

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A +LF  M S G K  V +Y+++    CK  E+E A  +  EML  G+     ++N++ 
Sbjct: 334 EALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVV 393

Query: 243 I-GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L    +++   +L  EM    +  +       I  LCK+G   EA E++  +     
Sbjct: 394 AWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGL 453

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
            +++   N LI GLC+   +K A ++ +++    +  D +TYNIMI   C   KMD+A  
Sbjct: 454 GVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQ 513

Query: 362 LFLDM 366
           L  DM
Sbjct: 514 LRDDM 518



 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 156/314 (49%), Gaps = 6/314 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   G E +  TYN +I G C+      A+ L ++M           KP+  
Sbjct: 475 EATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG------FKPDLF 528

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+   +   C  G V++   L  +MK E + P++VTY ++I G+C A D ++A     E+
Sbjct: 529 TFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTEL 588

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M  G++PN V +N ++    +NG + +A  +L+ M   G++P    YN+LM   C  G V
Sbjct: 589 MKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLV 648

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              + +F        +  V  Y+I+I G+CK  +I+ A+  + EM S+GI P+ + Y TL
Sbjct: 649 EEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTL 708

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +    E A KLFDEM   G+  D+ +Y T I G C+   + + VE    +     
Sbjct: 709 MFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVL 768

Query: 302 ELDIRAYNCLIDGL 315
           + D  +YN  +DG+
Sbjct: 769 KQDGCSYNAFVDGI 782



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/404 (25%), Positives = 188/404 (46%), Gaps = 42/404 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E  A+  +++ FG  PN   YN +I   CR GH   AL LF+EM +         K   V
Sbjct: 299 EVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKG------IKQTVV 352

Query: 62  TYTTIIDGLCKEGFVDKAKE------------------------------------LFLK 85
           TY  I   LCKEG ++ A++                                    L  +
Sbjct: 353 TYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIRE 412

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
           M    + PN     + I   C +    EA  ++ +++ +G+  NV + N +++ LC+   
Sbjct: 413 MLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNN 472

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
           M EA+++L+ M+  GV  +   YN ++ G C   +++ A +L   M   G K ++F+++I
Sbjct: 473 MKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNI 532

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
            ++ YC   ++E  L L  +M S+G+KPD+V Y T+  G  +   + +A +   E+ ++G
Sbjct: 533 FLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNG 592

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           +  +   Y   I G  +NG I +A+ +  T++    +     YN L+  +C +G ++   
Sbjct: 593 LRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVK 652

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            +F       +   V+ Y I+I   C  GK+D+A   F +M ++
Sbjct: 653 AVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSR 696



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 168/355 (47%), Gaps = 8/355 (2%)

Query: 16  EPNVFTYNTLINGLCRTG-HTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           +PN       I  LC++G H   A   F+ +  G    GV    N  T   +I GLC+  
Sbjct: 419 KPNDALMTACIQELCKSGKHEEAAEIWFQVLGKG---LGV----NVATSNALIHGLCQGN 471

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            + +A ++   M +  +  + +TYN +I G C A+  +EA  L  +M+ +G +P++ +FN
Sbjct: 472 NMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFN 531

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           + ++  C  GK++E   LL+ M   G++P+   Y T++DG+C    +++A E    +   
Sbjct: 532 IFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKN 591

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G + N   Y+ LI GY +N  I  A+ +   M   GI+P  V YN+L   +     VE  
Sbjct: 592 GLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEV 651

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             +F +     +      Y   I G CK G I EAV  F+ +       +   Y  L+  
Sbjct: 652 KAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFA 711

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             KSG  + A +LF  +    ++ D V+YN +I   C    +DK  +   +M ++
Sbjct: 712 YSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQ 766



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/198 (28%), Positives = 91/198 (45%), Gaps = 8/198 (4%)

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS----LYSEMLSKGIK 232
           L  R+ R   L V+  ++   H   +  +L+   C N    G+LS     + E+ ++G  
Sbjct: 114 LVSRLLRFNPLSVAAAAIADSHCTATADLLVRA-CLNSPAPGSLSRAADAFLELSARGAS 172

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKNGYIVEAV 290
           P +   + L   L    Q++ A K+F EM R G  VA D   Y   I  LC+ G I  A 
Sbjct: 173 PSIKTCSILVEALGCGGQLDVARKVFGEM-RDGKTVAPDVHTYTAMIKALCRAGEIDAAF 231

Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
            +   LR    +  +  YN L+D LCKSGR++ A+ L   +  G +   +VT+ I+I  L
Sbjct: 232 AMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGL 291

Query: 351 CADGKMDKARDLFLDMEA 368
               +  +   +  +M+ 
Sbjct: 292 ARGQQFGEVGAVLQEMQG 309


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 194/392 (49%), Gaps = 42/392 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E N+  Y+ ++NG C  G T  A  + + +  G G       PN VTYT ++ G C E
Sbjct: 273 GVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLP-GRG-----FSPNIVTYTLLVKGYCNE 326

Query: 74  GFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
             +++A+ +  ++ K++ +  +   + ++I+G+C      +A  L  EM+D  +Q N+  
Sbjct: 327 KNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFV 386

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N+++N  CK G+M EA  +L  M  +GVRP+ + YN+L+DG+C  G +N+A E + +M 
Sbjct: 387 YNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTML 446

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G      +Y+ L+ G+C    I+ AL L+  ML KGI P+ +  +TL  G F+  + E
Sbjct: 447 RNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTE 506

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A  L+ E    G+A +T  + T I+GLCK   + EA EL   ++  +   DI  Y  L 
Sbjct: 507 KALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLF 566

Query: 313 DGLCKSGRLKIAW---------------ELFRSLPRGVLIA------------------- 338
            G CK G +  A                E F SL  G  IA                   
Sbjct: 567 SGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLS 626

Query: 339 -DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            + V Y  +I   C +G +  A +L+L+M  K
Sbjct: 627 PNTVAYGALIAGWCKEGDLHTAYNLYLEMIEK 658



 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 197/396 (49%), Gaps = 36/396 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +AA L  ++     + N+F YN +ING C+ G  + A N+  EM       GV  +P+T 
Sbjct: 367 DAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMT------GVGVRPDTY 420

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y +++DG CK+G ++KA E +  M         +TYN+L+ GFC     ++A  L+  M
Sbjct: 421 SYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLM 480

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+ PN +S + +++   K+GK ++A  L +  +  G+  N   +NT+++G C   R+
Sbjct: 481 LKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERM 540

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AEEL   M+   C  ++ +Y  L +GYCK  +++ A  + +E+ + G  P +  +N+L
Sbjct: 541 PEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSL 600

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G F   Q  +   +  EM   G++ +T AY   I G CK G +  A  L+  L +++ 
Sbjct: 601 ITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLY--LEMIEK 658

Query: 302 ELDIRAYNC--LIDGLCKSGRLKIAWELFRSLPRGVLIADV------------------- 340
            L    + C  L+    + G+   A  + ++L    +I D+                   
Sbjct: 659 GLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAG 718

Query: 341 -------VTYNIMIHALCADGKMDKARDLFLDMEAK 369
                  + +NI+I  LC  G+++ A++L  D++ K
Sbjct: 719 GNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDK 754



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 187/401 (46%), Gaps = 42/401 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  +F ++R  GC  ++ + N+++N L +TG     + +FE+M            P+  T
Sbjct: 192 ALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGA------LPDKFT 245

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
              +    CK   V  A E   +M    +  N+V Y+++++G+C     N+A+ +   + 
Sbjct: 246 VAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLP 305

Query: 123 DQGVQPNVVS------------------------------------FNVIMNELCKNGKM 146
            +G  PN+V+                                    F  ++N  C+ G+M
Sbjct: 306 GRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRM 365

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           ++A+RLL  M+   ++ N FVYN +++G+C  GR+  A  +   M  +G + + +SY+ L
Sbjct: 366 EDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSL 425

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++GYCK   +  A   Y+ ML  G     + YN L  G   +  ++ A +L+  M + G+
Sbjct: 426 VDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGI 485

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A +  +  T +DG  K+G   +A+ L++         +   +N +I+GLCK  R+  A E
Sbjct: 486 APNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEE 545

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           L   + +     D++TY  +    C  G MD+A  +  ++E
Sbjct: 546 LVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELE 586



 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 111/379 (29%), Positives = 178/379 (46%), Gaps = 32/379 (8%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   N  T+NT+INGLC+      A  L ++M          C P+ +TY T+  G CK 
Sbjct: 519 GLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWR------CPPDIITYRTLFSGYCKI 572

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D+A  +  ++++    P +  +NSLI G   A    +   +  EM ++G+ PN V++
Sbjct: 573 GDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAY 632

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL------ 187
             ++   CK G +  A  L   MI+ G+ PN F+ ++L+  F   G+ + A  +      
Sbjct: 633 GALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVG 692

Query: 188 -------------------FVSMESMGCKHNV-FSYSILINGYCKNKEIEGALSLYSEML 227
                              F+   + G  H+    ++I+I G CK   IE A +L +++ 
Sbjct: 693 TDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLK 752

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
            KG   D   Y++L  G      V+ AF L D M   G+  +   Y + I GLCK+G + 
Sbjct: 753 DKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELS 812

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
            AV LF+ L       +   YN LID  CK G +  A++L + +    +   V TY+I+I
Sbjct: 813 RAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILI 872

Query: 348 HALCADGKMDKARDLFLDM 366
           + LC  G M++A  L   M
Sbjct: 873 NGLCTQGYMEEAIKLLDQM 891



 Score =  161 bits (407), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/374 (27%), Positives = 182/374 (48%), Gaps = 32/374 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K++ + C P++ TY TL +G C+ G    A  +  E+ N     G    P   
Sbjct: 542 EAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELEN----LGFA--PTIE 595

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            + ++I G        K  ++  +M +  ++PN V Y +LI G+C   D + A  L++EM
Sbjct: 596 FFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEM 655

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN----------------- 164
           +++G+ PN+   + +++   + GK DEA+ +L+ ++   + P+                 
Sbjct: 656 IEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDT 715

Query: 165 ---------AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
                      ++N ++ G C  GR+  A+ L   ++  G   + F+YS LI+G   +  
Sbjct: 716 VAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGF 775

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           ++ A  L   MLS G+ P++V YN+L  GL +  ++ RA  LF ++   G++ +   Y T
Sbjct: 776 VDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNT 835

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            ID  CK+GYI EA +L + +        +  Y+ LI+GLC  G ++ A +L   +    
Sbjct: 836 LIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENN 895

Query: 336 LIADVVTYNIMIHA 349
           +  + VTY  +I  
Sbjct: 896 VDPNYVTYWTLIQG 909



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 183/376 (48%), Gaps = 34/376 (9%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNTVTYTTIIDGLCK 72
           G  PN  + +TL++G  ++G T  ALNL++E +A G  +       NT T+ T+I+GLCK
Sbjct: 484 GIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAK-------NTTTFNTVINGLCK 536

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
              + +A+EL  KMK     P+++TY +L  G+C   D + A  +  E+ + G  P +  
Sbjct: 537 IERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEF 596

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           FN ++       +  + + +L  M   G+ PN   Y  L+ G+C  G ++ A  L++ M 
Sbjct: 597 FNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMI 656

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV----------------- 235
             G   N+F  S L++ + +  + + A  +   ++   + PD+                 
Sbjct: 657 EKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTV 716

Query: 236 ---------VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
                    +++N +  GL ++ ++E A  L  +++  G  AD + Y + I G   +G++
Sbjct: 717 AGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFV 776

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             A +L  T+  +    +I  YN LI GLCKSG L  A  LF+ L    +  + +TYN +
Sbjct: 777 DVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTL 836

Query: 347 IHALCADGKMDKARDL 362
           I   C DG + +A  L
Sbjct: 837 IDKHCKDGYITEAFKL 852



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 159/333 (47%), Gaps = 5/333 (1%)

Query: 38  ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
           A  LF  +     EF      +  ++  ++  L   G +D A ++F +M+      ++ +
Sbjct: 155 APPLFPHLVEVYKEFSF----SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRS 210

Query: 98  YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
            NS+++      D      +F +M   G  P+  +  ++    CK   +  A   +E M 
Sbjct: 211 CNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMT 270

Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
           ++GV  N   Y+ +M+G+C  G+ N A  +  S+   G   N+ +Y++L+ GYC  K +E
Sbjct: 271 KMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNME 330

Query: 218 GALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
            A  +  E+  +K +  D  ++  +  G  ++ ++E A +L +EM    +  + + Y   
Sbjct: 331 EAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIM 390

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           I+G CK G +VEA  +   +  +    D  +YN L+DG CK G +  A+E + ++ R   
Sbjct: 391 INGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGF 450

Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            A  +TYN ++   C+ G +D A  L+  M  K
Sbjct: 451 AATTLTYNALLKGFCSLGSIDDALRLWFLMLKK 483



 Score =  128 bits (321), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 152/329 (46%), Gaps = 23/329 (6%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTG---------HTIVALNLFEEMANGNGEFGVVC 56
           L++++   G  PN+F  ++L++   R G           +V  ++  +++    E G V 
Sbjct: 651 LYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVA 710

Query: 57  -----------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
                          + +  +I GLCK G ++ AK L   +KD+    +  TY+SLIHG 
Sbjct: 711 NFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGC 770

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
             +   + A  L   M+  G+ PN+V++N ++  LCK+G++  A  L + +   G+ PNA
Sbjct: 771 SASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNA 830

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
             YNTL+D  C  G +  A +L   M   G    VF+YSILING C    +E A+ L  +
Sbjct: 831 ITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQ 890

Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
           M+   + P+ V Y TL  G      V+      D+      A+   A R     + +   
Sbjct: 891 MIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTIVVKASPRRAVRR-PGSVSRPAR 949

Query: 286 IVEAVELFRTLRILKYELDI--RAYNCLI 312
           +  A +      +L  ++ I  + YNCLI
Sbjct: 950 LTPAPKASGRDYVLNMQVSITFQQYNCLI 978


>gi|224088774|ref|XP_002308534.1| predicted protein [Populus trichocarpa]
 gi|222854510|gb|EEE92057.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 190/353 (53%), Gaps = 11/353 (3%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+  TY T+I G C+ G    A  +F+EM         +C+PN +T  T+I+G CK+G 
Sbjct: 197 KPDASTYTTMIRGFCKVGMIDNARKVFDEM---------ICEPNLITCNTLINGYCKKGD 247

Query: 76  VDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           ++ A+    +M + ++  P+ VTY++LI G+C   + NEA+     M+ +G  PN+ ++N
Sbjct: 248 MENARIFLCRMMESKDCLPDTVTYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYN 307

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
            I+  LC  G +DEA RLL  M   GV+ N   + +++ G  + G+   A   F  M   
Sbjct: 308 AIIYGLCLRGNVDEARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRK 367

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G K +   + ++I  YCK ++ + A+SL  EM +KGI   V  +N +   L EI ++++A
Sbjct: 368 GMKLDAKEHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEIGELDKA 427

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCK-NGYIVEAVELFRTLRILKYELDIRAYNCLID 313
             L  +++  G   +  +Y T I GLC+ +G + E   L   +    +E+D   Y+CL+ 
Sbjct: 428 VLLLKQVKNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVG 487

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G C++G  ++A   F        + ++ +++  ++ +C  GK+ +A  +F DM
Sbjct: 488 GFCEAGNEEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIFKDM 540



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 148/313 (47%), Gaps = 9/313 (2%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y  IID L        AK L     +++   + +  + LI  + Y+ D   A   F
Sbjct: 97  NHRCYVAIIDLLLSHSLFPIAKNLL----EKHGTFSDLLVSKLIRAYGYSGDTKSAIFWF 152

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV-RPNAFVYNTLMDGFCL 177
            ++ +      + S+N I+  L K  +++ A    + ++   V +P+A  Y T++ GFC 
Sbjct: 153 HKVKEIQQGKCLFSWNAILGVLVKVNQINVAKSFFDQIVNDAVVKPDASTYTTMIRGFCK 212

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVV 236
            G ++ A ++F   + M C+ N+ + + LINGYCK  ++E A      M+ SK   PD V
Sbjct: 213 VGMIDNARKVF---DEMICEPNLITCNTLINGYCKKGDMENARIFLCRMMESKDCLPDTV 269

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
            Y+TL  G  +  ++  A K  D M   G   + W Y   I GLC  G + EA  L   +
Sbjct: 270 TYSTLIDGYCKKGELNEARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKM 329

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
           R+   + ++  +  ++ GL  +G+ + A   F  + R  +  D   + ++I A C   K 
Sbjct: 330 RLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKP 389

Query: 357 DKARDLFLDMEAK 369
           D+A  L  +M+AK
Sbjct: 390 DEAISLLKEMQAK 402



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 136/280 (48%), Gaps = 11/280 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
           EA      + + GC PN++TYN +I GLC  G+   A  L  +M  NG        K N 
Sbjct: 286 EARKWMDGMLIRGCNPNLWTYNAIIYGLCLRGNVDEARRLLTKMRLNG-------VKENV 338

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+ +I+ GL   G  ++A   F +M  + +  +   +  +I  +C     +EA  L  E
Sbjct: 339 ATHLSILKGLSVAGKSEEAIGYFSEMIRKGMKLDAKEHEVVITAYCKMRKPDEAISLLKE 398

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT-G 179
           M  +G+  +V SFN ++  L + G++D+A  LL+ +  +G  PN   Y+T++ G C + G
Sbjct: 399 MQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQVKNMGCLPNLVSYSTVICGLCRSHG 458

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R+     L   M   G + +   YS L+ G+C+    E A+  + + ++K    ++  + 
Sbjct: 459 RMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGNEEMAMRAFYDSINKNYVINLQSF- 517

Query: 240 TLFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           + F+ L     +V  A ++F +M R     D  +Y+  +D
Sbjct: 518 SFFVNLMCGKGKVIEAEQIFKDMCRRCSLVDVDSYQRVLD 557



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/253 (25%), Positives = 120/253 (47%), Gaps = 7/253 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  K+R+ G + NV T+ +++ GL   G +  A+  F EM           K +  
Sbjct: 321 EARRLLTKMRLNGVKENVATHLSILKGLSVAGKSEEAIGYFSEMIRKG------MKLDAK 374

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            +  +I   CK    D+A  L  +M+ + I+ +V ++N+++       + ++A  L  ++
Sbjct: 375 EHEVVITAYCKMRKPDEAISLLKEMQAKGISRSVGSFNAVLRILVEIGELDKAVLLLKQV 434

Query: 122 MDQGVQPNVVSFNVIMNELCK-NGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            + G  PN+VS++ ++  LC+ +G+M E + L++ M+Q G   +A +Y+ L+ GFC  G 
Sbjct: 435 KNMGCLPNLVSYSTVICGLCRSHGRMQEVAGLVDDMLQDGFEMDATLYSCLVGGFCEAGN 494

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              A   F    +     N+ S+S  +N  C   ++  A  ++ +M  +    DV  Y  
Sbjct: 495 EEMAMRAFYDSINKNYVINLQSFSFFVNLMCGKGKVIEAEQIFKDMCRRCSLVDVDSYQR 554

Query: 241 LFIGLFEIHQVER 253
           +       H   R
Sbjct: 555 VLDDQLHKHSGRR 567


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 176/336 (52%), Gaps = 7/336 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           A   ++R FG  P+   Y  +I G CR G    AL + +EM       G  C P+ VTY 
Sbjct: 2   AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV------GCGCLPDVVTYN 55

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+++GLCKE  +  A+ L  +M++  + P++ T+ +LIHG+C     ++A  LF  M++Q
Sbjct: 56  TLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQ 115

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
            ++P++V++N +++ +C+ G +D+A+ L + M    + PN   Y+ L+D  C  G+V  A
Sbjct: 116 RLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDA 175

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
                 M + G   N+ +Y+ +I GYC++  +        +M+   + PD++ YNTL  G
Sbjct: 176 FGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHG 235

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +  ++  AFKL + M++  V  D   Y   I+G   +G + EA  +F  +     E D
Sbjct: 236 YIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPD 295

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRS-LPRGVLIAD 339
              Y  +I+G   +G  K A++L    L RG    D
Sbjct: 296 RYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 331



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 10/319 (3%)

Query: 52  FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN----PNVVTYNSLIHGFCY 107
           FG+V  P+ V YT +I G C+ G +  A    L+++DE +     P+VVTYN+L++G C 
Sbjct: 10  FGLV--PDGVIYTMVIGGFCRAGLMSDA----LRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 108 ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV 167
                +A+ L  EM ++GV P++ +F  +++  C  GK+D+A +L + M+   +RP+   
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YNTL+DG C  G +++A +L+  M S     N  +YSILI+ +C+  ++E A     EM+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           +KGI P+++ YN++  G      V +  K   +M  + V+ D   Y T I G  K   + 
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A +L   +   K + D+  YN LI+G    G ++ A  +F  +    +  D  TY  MI
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 348 HALCADGKMDKARDLFLDM 366
           +     G   +A  L  +M
Sbjct: 304 NGHVTAGNSKEAFQLHDEM 322



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 151/269 (56%), Gaps = 6/269 (2%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  L  ++R  G  P++ T+ TLI+G C  G    AL LF+ M N         +P+ 
Sbjct: 68  LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQR------LRPDI 121

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY T+IDG+C++G +DKA +L+  M    I PN VTY+ LI   C      +A     E
Sbjct: 122 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 181

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+++G+ PN++++N I+   C++G + +  + L+ M+   V P+   YNTL+ G+    +
Sbjct: 182 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 241

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A +L   ME    + +V +Y++LING+  +  ++ A  ++ +M +KGI+PD   Y +
Sbjct: 242 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 301

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +  G       + AF+L DEM + G A D
Sbjct: 302 MINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 155/277 (55%)

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
           P+ V Y  +I GFC A   ++A  +  EM+  G  P+VV++N ++N LCK  ++ +A  L
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
           L  M + GV P+   + TL+ G+C+ G++++A +LF +M +   + ++ +Y+ LI+G C+
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133

Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
             +++ A  L+ +M S+ I P+ V Y+ L     E  QVE AF   DEM   G+  +   
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMT 193

Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
           Y + I G C++G + +  +  + + + K   D+  YN LI G  K  ++  A++L   + 
Sbjct: 194 YNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMME 253

Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +  +  DVVTYN++I+     G + +A  +F  M AK
Sbjct: 254 KEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 290


>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
          Length = 551

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 187/371 (50%), Gaps = 8/371 (2%)

Query: 1   MEAAALFMKLRVFGCEPNV--FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           ++ AA  +K     C  +V   + + +++G C++G    A  L +EM       GV  K 
Sbjct: 123 LDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMP----RHGV--KV 176

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N + Y +++D   +E   D+  E+   M++E I P V TY  L+ G   A D  + + +F
Sbjct: 177 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 236

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  + +  +V  ++ ++N  C+ G +  AS + +  +  G+ PN   Y  L++GFC  
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 296

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++  AE L   M+  G   N   ++ +I+GYC+   ++ AL +   M   GI+ DV  Y
Sbjct: 297 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 356

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  GL   ++++ A  L   M   GV  +  +Y T I   C  G +VEA  LFR +  
Sbjct: 357 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 416

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              E  +  YN ++DG  K G ++ A    + + +  L+ D+ +Y  ++H  C +GK+D 
Sbjct: 417 NGAEPSLVTYNVMMDGYIKKGSIREAERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDV 476

Query: 359 ARDLFLDMEAK 369
           A  LF +M+ +
Sbjct: 477 ALRLFEEMKQR 487



 Score =  174 bits (441), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 173/344 (50%), Gaps = 6/344 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP V TY  L++GL           +FEEM + N         +   Y+++I+  C+ 
Sbjct: 208 GIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN------LSGDVYFYSSVINAYCRA 261

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A E+F +     I PN  TY +LI+GFC       A+ L  +M  +GV  N + F
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C+   +D+A  +  +M ++G+  + + YNTL  G     R++ A+ L   M  
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + N  SY+ LI+ +C   ++  A  L+ EM   G +P +V YN +  G  +   +  
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +   EM++ G+  D ++Y   + G C NG +  A+ LF  ++    + ++ AY  LI 
Sbjct: 442 AERFKKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALIS 501

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           GL K GR + A++L+ ++    L  D   Y+ ++ +L  D K +
Sbjct: 502 GLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 545



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 6/151 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++   G EP++ TYN +++G  + G    A    +EM     + G+V  P+ 
Sbjct: 405 VEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEME----KKGLV--PDI 458

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++ G C  G VD A  LF +MK     PN+V Y +LI G        EA  L+  
Sbjct: 459 YSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDN 518

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           M+  G+ P+   ++ ++  L  + K +   R
Sbjct: 519 MLGDGLTPDDALYSALVGSLHTDKKQNVKPR 549


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 193/417 (46%), Gaps = 75/417 (17%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  G +PNVFTYN L+  LC+      A  + +EMA         C P+ VTY TI+  
Sbjct: 160 MRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKG------CPPDDVTYGTIVSA 213

Query: 70  LCKEGFVDKAKELF--------------------LKMKD----------ENINPNVVTYN 99
           LC  G VD+A E+                      +M++            + PNV+TY 
Sbjct: 214 LCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYT 273

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
           ++++ FC A +   A  +   M+  G  PNV +F  ++  L  +G++ +A  + + M+  
Sbjct: 274 TIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAE 333

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G  P+   YN L+ G C  G +  A  +   ME  GC  N  +YS LI+G+ K  +++GA
Sbjct: 334 GWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGA 393

Query: 220 LSLYSEMLSKGIKPDVVIY-----------------------------------NTLFIG 244
           +S++++M   G KP+VV+Y                                   NTL   
Sbjct: 394 ISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRS 453

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    +V RA  +F EM+RHG   +   Y   + GL + G   +A+++   ++    EL 
Sbjct: 454 LCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELS 513

Query: 305 IRAYNCLIDGLC--KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           +  YN ++ GLC  + GR +  + + R + RG+   D  T+  +IHA C +G++  A
Sbjct: 514 LVTYNTVVSGLCQMRMGR-EAMFFVGRMIVRGIQ-PDAFTFTAIIHAYCKEGEVRMA 568



 Score =  157 bits (397), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 168/350 (48%), Gaps = 10/350 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
           A A+  ++ + GC PNV T+  L+ GL   G    AL++++ M A G         P+TV
Sbjct: 288 ACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEG-------WAPSTV 340

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I GLC  G +  A  +   M+     PN  TY++LI GF  A D + A  ++ +M
Sbjct: 341 SYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDM 400

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +PNVV +  ++   CK    ++A  L++ M+     PN   +NTL+   C   RV
Sbjct: 401 TRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRV 460

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            RA  +F  M   GC  N  +Y+ L++G  +      AL +  EM + GI+  +V YNT+
Sbjct: 461 GRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTV 520

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL ++     A      M   G+  D + +   I   CK G +  A  +   + ++  
Sbjct: 521 VSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNC 580

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAW-ELFRSLPRGVLIADVVTYNIMIHAL 350
             +I  Y  L+  LC   +L+ A   L + L  G+   + VT+N+++  +
Sbjct: 581 GRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIY-PNTVTWNVLVRGV 629



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 153/359 (42%), Gaps = 10/359 (2%)

Query: 8   MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
           M+LR   C          +    R G    AL  F    +   + G         Y  +I
Sbjct: 87  MRLRGVPCTEGALV--AAVGAFARAGAPDRALKTFYRAVH---DLGCARPTAPRLYNHLI 141

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           D L +E  V     +   M+ + + PNV TYN L+   C  +    A+ +  EM  +G  
Sbjct: 142 DALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCP 201

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P+ V++  I++ LC  G++DEA+ +L         P A  YN ++   C   R+     +
Sbjct: 202 PDDVTYGTIVSALCTLGRVDEATEVLS-----AAPPVAASYNAVILALCREFRMQEVFAV 256

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
              M   G + NV +Y+ ++N +CK  E+  A ++ + M+  G  P+V  +  L  GLF 
Sbjct: 257 VGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFN 316

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
             +V  A  ++  M   G A  T +Y   I GLC  G +  A  +   +       + R 
Sbjct: 317 DGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNART 376

Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           Y+ LIDG  K+G L  A  ++  + R     +VV Y  M+   C     ++A  L   M
Sbjct: 377 YSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKM 435



 Score =  134 bits (338), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 134/274 (48%), Gaps = 29/274 (10%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A+++   +   GC PN  TY+TLI+G  + G    A++++ +M     +  VV       
Sbjct: 358 ASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVG 417

Query: 56  ----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                 C PNTVT+ T+I  LC    V +A  +F +M+     P
Sbjct: 418 VFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPP 477

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N  TYN L+HG     +  +A  + IEM + G++ ++V++N +++ LC+     EA   +
Sbjct: 478 NGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFV 537

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             MI  G++P+AF +  ++  +C  G V  A  +  +M  + C  N+  Y+IL+   C  
Sbjct: 538 GRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQ 597

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
            ++E A+    +ML +GI P+ V +N L  G+F 
Sbjct: 598 DKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFR 631



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/212 (30%), Positives = 104/212 (49%), Gaps = 6/212 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A +L  K+ V  C PN  T+NTLI  LC       AL +F EM          C PN  
Sbjct: 427 QAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG------CPPNGR 480

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GL +EG    A ++ ++M++  I  ++VTYN+++ G C      EA      M
Sbjct: 481 TYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRM 540

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+QP+  +F  I++  CK G++  A+ +L  M  +    N  VY  LM   C   ++
Sbjct: 541 IVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKL 600

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             A    + M   G   N  ++++L+ G  +N
Sbjct: 601 EDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRN 632



 Score = 94.7 bits (234), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 108/235 (45%), Gaps = 5/235 (2%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           +N +++ L +   +   + +   M + GV+PN F YN L+   C   RV  A ++   M 
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
           + GC  +  +Y  +++  C    ++ A    +E+LS    P    YN + + L    +++
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEA----TEVLSAA-PPVAASYNAVILALCREFRMQ 251

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
             F +  +M   G+  +   Y T ++  CK G +  A  +   + I     ++  +  L+
Sbjct: 252 EVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALV 311

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            GL   GR+  A ++++ +         V+YN++I  LC+ G +  A  +  DME
Sbjct: 312 GGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDME 366


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 176/353 (49%), Gaps = 6/353 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+  YNTLI+G C+ G   +A  LF E+       G +  P   TY  II+G CK+
Sbjct: 215 GCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLK----GFL--PTVETYGAIINGFCKK 268

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G       L ++M    +  NV  YN++I          +A      M++ G +P++V++
Sbjct: 269 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 328

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C++GK+ EA +LLE  +  G+ PN F Y  L+  +C  G  +RA    + M  
Sbjct: 329 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 388

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G K ++ +Y  L++G     E++ AL++  +ML +G+ PD  IYN L  GL +  ++  
Sbjct: 389 RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPA 448

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L  EM    V  D + Y T +DG  +NG + EA +LF           I  YN +I 
Sbjct: 449 AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIK 508

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           G CK G +K A      + +  L  D  TY+ +I        +D A+ +F +M
Sbjct: 509 GYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREM 561



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/323 (30%), Positives = 169/323 (52%), Gaps = 14/323 (4%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L M++   G   NV  YNT+I+   + GH + A+   E M     E G  CKP+ VTY T
Sbjct: 277 LLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI----ECG--CKPDIVTYNT 330

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           +I G C++G V +A +L  +   + + PN  +Y  LIH +C    ++ A    IEM ++G
Sbjct: 331 LISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERG 390

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            +P++V++  +++ L   G++D A  + E M++ GV P+A +YN LM G C   ++  A+
Sbjct: 391 HKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAK 450

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            L   M       + F Y+ L++G+ +N  ++ A  L+   + KG+ P +V YN +  G 
Sbjct: 451 LLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGY 510

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A    + M++  +A D + Y T IDG  K   +  A ++FR +  +K + ++
Sbjct: 511 CKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNV 570

Query: 306 RAYNCLIDGLCKSGRLKIAWELF 328
                 +DGL   G L I   LF
Sbjct: 571 ------MDGL--QGLLLIIPSLF 585



 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 104/329 (31%), Positives = 155/329 (47%), Gaps = 6/329 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF++L++ G  P V TY  +ING C+ G       L  EM N  G        N   
Sbjct: 239 ANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEM-NSRG-----LTVNVQV 292

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y TIID   K G + KA E    M +    P++VTYN+LI G C     +EA  L  + +
Sbjct: 293 YNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 352

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
            +G+ PN  S+  +++  CK G  D AS  L  M + G +P+   Y  L+ G  + G V+
Sbjct: 353 GKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVD 412

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +   M   G   +   Y+IL++G CK  ++  A  L +EML + + PD  +Y TL 
Sbjct: 413 VALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLV 472

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G      ++ A KLF+     G+      Y   I G CK G + +A+     ++     
Sbjct: 473 DGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLA 532

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            D   Y+ +IDG  K   L  A ++FR +
Sbjct: 533 PDEFTYSTVIDGYVKQHDLDGAQKMFREM 561



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 148/313 (47%), Gaps = 18/313 (5%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y++++  L +     + + +   M+ E ++P     + +I  +  +    +A  L+
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 119 IEMMDQGVQ-PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             ++      P+V++ N ++N L K G+++ A +   +M++               G C 
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVK---------------GLCK 197

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G++    +L       GC  N+  Y+ LI+GYCK  ++E A  L+ E+  KG  P V  
Sbjct: 198 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 257

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  +  G  +    +   +L  EM   G+  +   Y T ID   K+G+IV+AVE    + 
Sbjct: 258 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 317

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKM 356
               + DI  YN LI G C+ G++  A +L  ++L +G L+ +  +Y  +IHA C  G  
Sbjct: 318 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKG-LMPNKFSYTPLIHAYCKQGGY 376

Query: 357 DKARDLFLDMEAK 369
           D+A +  ++M  +
Sbjct: 377 DRASNWLIEMTER 389



 Score = 47.4 bits (111), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 19/149 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  LF      G  P +  YN +I G C+ G    A+     M   +        P+  
Sbjct: 483 EARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRH------LAPDEF 536

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNV--------VTYNSLIHGFCYAN-DWN 112
           TY+T+IDG  K+  +D A+++F +M      PNV        +   SL   F +AN + +
Sbjct: 537 TYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVMDGLQGLLLIIPSL---FAFANMECS 593

Query: 113 EAKCL-FIEMMDQGVQPNVVSFNVIMNEL 140
           E  C+ +  ++DQ +       +VI+  +
Sbjct: 594 ELHCINYSSILDQYLPQGTSEASVILQTM 622


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 185/351 (52%), Gaps = 6/351 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G E +++TYN +I+ LC+   +  A  L + M   N        P+  +Y T+I G   E
Sbjct: 294 GIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVN------LTPDECSYNTLIHGFFGE 347

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G ++ A  +F +M  +++ P+V TY +LI G+C     +EA+ +  EM   GV+P+ +++
Sbjct: 348 GKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTY 407

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           + ++N  CK+ K+  A  L++ +    +  N  +Y  L+DGFC  G V++A+++   M +
Sbjct: 408 SALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLA 467

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G   +V +YS LING CK   I     + S M   G+ P+ V+Y TL     +    + 
Sbjct: 468 DGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKE 527

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A K F ++ R G+ A++  +   +    + G I EA +  + +  +K   D+ ++NC+ID
Sbjct: 528 ALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIID 587

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
             C+ G +  A+ ++ ++ R     D+ TY  ++  LC  G + +A++  +
Sbjct: 588 SYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 638



 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 198/385 (51%), Gaps = 23/385 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA +++  +   G  P++ TY +L+ GLC+ GH + A      +          C  + 
Sbjct: 596 LEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEK------ACAIDE 649

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T  T++ G+CK G +D+A +L  KM   NI P+  TY  L+ GFC       A  L   
Sbjct: 650 KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQM 709

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTG 179
           M+++G+ P+ +++  ++N L   G++  AS +  E++ + G+  +   YN++M+G+   G
Sbjct: 710 MLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG 769

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           ++N  E L  +M       +  SY+IL++GY K  ++   L LY +M+ +GIKPD V Y 
Sbjct: 770 QINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYR 829

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GL E   +E A K  ++M   GV  D  A+   I    +   +  A++LF  ++ +
Sbjct: 830 LLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWV 889

Query: 300 -----KYEL--DIRAY---------NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
                 +EL  D++A          + ++ GLCK G+++ A  +F S+ R  ++  + T+
Sbjct: 890 GDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATF 949

Query: 344 NIMIHALCADGKMDKARDLFLDMEA 368
             ++H LC + K+D A  L   ME+
Sbjct: 950 TTLMHGLCKEFKIDDAFHLKQLMES 974



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 182/368 (49%), Gaps = 6/368 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  ++++ G  P+  TY+ L+NG C+      AL+L + + + +         N  
Sbjct: 387 EARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISI------NRT 440

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            YT +IDG C+ G V KAK++   M  + I+P+V+TY++LI+G C     +E K +   M
Sbjct: 441 MYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRM 500

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              GV PN V +  ++   CK G   EA +    + + G+  N+ ++N L+  F   G +
Sbjct: 501 QKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMI 560

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE+    M  M    +V S++ +I+ YC+   +  A S+Y  M+  G  PD+  Y +L
Sbjct: 561 AEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSL 620

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +   + +A +    +     A D     T + G+CK+G + EA++L   +     
Sbjct: 621 LRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNI 680

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             D   Y  L+DG CK G++  A  L + +    L+ D + Y  +++ L  +G++  A  
Sbjct: 681 LPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASY 740

Query: 362 LFLDMEAK 369
           +F ++  K
Sbjct: 741 MFQEIICK 748



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 178/361 (49%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  ++R     P+  +YNTLI+G    G   +A+ +F +M   +       KP+  
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQS------LKPSVA 370

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT +IDG C+ G  D+A+ +  +M+   + P+ +TY++L++G+C  +    A  L   +
Sbjct: 371 TYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYL 430

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + +  N   + ++++  C+ G++ +A ++L+ M+  G+ P+   Y+ L++G C  G +
Sbjct: 431 RSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMI 490

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  +E+   M+  G   N   Y+ L+  +CK    + AL  + ++   G+  + VI+N L
Sbjct: 491 HETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNAL 550

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
               +    +  A +    M R  ++ D  ++   ID  C+ G ++EA  ++  +    +
Sbjct: 551 LCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGW 610

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             DI  Y  L+ GLC+ G L  A E    L       D  T N ++  +C  G +D+A D
Sbjct: 611 PPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALD 670

Query: 362 L 362
           L
Sbjct: 671 L 671



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 183/385 (47%), Gaps = 23/385 (5%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            EA  L  K+      P+ +TY  L++G C+ G  + AL L + M     E G+V  P+T+
Sbjct: 667  EALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMML----EKGLV--PDTI 720

Query: 62   TYTTIIDGLCKEGFVDKAKELFLKMK-DENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             YT +++GL  EG V  A  +F ++   E +  + + YNS+++G+      NE + L   
Sbjct: 721  AYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRN 780

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M +  V P+  S+N++M+   K G++     L   M++ G++P+   Y  L+ G C  G 
Sbjct: 781  MHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGL 840

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS---------------- 224
            +  A +    M   G   +  ++ ILI  + +  ++  AL L+S                
Sbjct: 841  IEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKE 900

Query: 225  EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
            +M + G+ P  V  +++  GL +  +VE A  +F  + R G+      + T + GLCK  
Sbjct: 901  DMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEF 960

Query: 285  YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
             I +A  L + +     ++D+  YN LI GLC    +  A +L+  +    L+ ++ TY 
Sbjct: 961  KIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYI 1020

Query: 345  IMIHALCADGKMDKARDLFLDMEAK 369
             +  A+ A G M     L  D+E +
Sbjct: 1021 TLTGAMYATGTMQDGEKLLKDIEDR 1045



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 182/366 (49%), Gaps = 7/366 (1%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++AAA    +   G + ++F+ N ++N L     +       +E  +      V      
Sbjct: 177 LDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVT----- 231

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T   +++ LC +G + KA+ +  KMK+  + PN VTYN++++ +        A  +  +
Sbjct: 232 -TCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDD 289

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G++ ++ ++N+++++LCK  +   A  LL+ M ++ + P+   YNTL+ GF   G+
Sbjct: 290 MEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGK 349

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +N A  +F  M     K +V +Y+ LI+GYC+N   + A  +  EM   G++P  + Y+ 
Sbjct: 350 INLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSA 409

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  +  ++  A  L   ++   ++ +   Y   IDG C+ G + +A ++ + +    
Sbjct: 410 LLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADG 469

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            + D+  Y+ LI+G+CK G +    E+   + +  ++ + V Y  ++   C  G   +A 
Sbjct: 470 IDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEAL 529

Query: 361 DLFLDM 366
             F+D+
Sbjct: 530 KYFVDI 535



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 182/370 (49%), Gaps = 16/370 (4%)

Query: 4   AALFMKL--RVFGCEP-NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +A+F  L   +  C+P N+F+ + L+N   + G  + A      M     E G   K + 
Sbjct: 142 SAIFSSLLRTISRCDPTNLFSVDLLVNAYVKEGKVLDAAAAIFFM----DECGF--KASL 195

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMK---DENINPNVVTYNSLIHGFCYANDWNEAKCL 117
            +   I++ L     ++K++ ++L +K   D     +V T N +++  C     ++A+ +
Sbjct: 196 FSCNNILNALVG---INKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKAESM 252

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
             +M +  + PN V++N I+N   K G+   A R+L+ M + G+  + + YN ++D  C 
Sbjct: 253 LQKMKNCRL-PNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCK 311

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R  RA  L   M  +    +  SY+ LI+G+    +I  A+ ++++ML + +KP V  
Sbjct: 312 LKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVAT 371

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y  L  G     + + A ++  EMQ  GV      Y   ++G CK+  +  A++L + LR
Sbjct: 372 YTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLR 431

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                ++   Y  LIDG C+ G +  A ++ + +    +  DV+TY+ +I+ +C  G + 
Sbjct: 432 SRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIH 491

Query: 358 KARDLFLDME 367
           + +++   M+
Sbjct: 492 ETKEILSRMQ 501



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 132/266 (49%), Gaps = 22/266 (8%)

Query: 17   PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
            P+  +YN L++G  + G     L L+ +M           KP+ VTY  +I GLC+ G +
Sbjct: 788  PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEG------IKPDNVTYRLLIFGLCEYGLI 841

Query: 77   DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI----------------E 120
            + A +   KM  E + P+ + ++ LI  F   +  + A  LF                 +
Sbjct: 842  EIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKED 901

Query: 121  MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M   GV P+ V+ + I+  LCK GK++EA  +   +++ G+ P    + TLM G C   +
Sbjct: 902  MKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFK 961

Query: 181  VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            ++ A  L   MES G K +V +Y++LI G C  K I  AL LY EM SKG+ P++  Y T
Sbjct: 962  IDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYIT 1021

Query: 241  LFIGLFEIHQVERAFKLFDEMQRHGV 266
            L   ++    ++   KL  +++  G+
Sbjct: 1022 LTGAMYATGTMQDGEKLLKDIEDRGI 1047



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 22/237 (9%)

Query: 14   GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
            G +P+  TY  LI GLC  G   +A+   E+M    G F     P+ + +  +I    ++
Sbjct: 820  GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL-EGVF-----PDNLAFDILIKAFSEK 873

Query: 74   ----------------GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
                            G +D A EL   MK   + P+ V  +S++ G C      EA  +
Sbjct: 874  SKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIV 933

Query: 118  FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            F  +M  G+ P + +F  +M+ LCK  K+D+A  L +LM   G++ +   YN L+ G C 
Sbjct: 934  FSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCN 993

Query: 178  TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
               +  A +L+  M+S G   N+ +Y  L         ++    L  ++  +GI P 
Sbjct: 994  KKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 6/155 (3%)

Query: 10   LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
            ++  G  P+    ++++ GLC+ G    A+ +F  +       G+V  P   T+TT++ G
Sbjct: 902  MKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA----GMV--PTIATFTTLMHG 955

Query: 70   LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
            LCKE  +D A  L   M+   +  +VVTYN LI G C      +A  L+ EM  +G+ PN
Sbjct: 956  LCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPN 1015

Query: 130  VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            + ++  +   +   G M +  +LL+ +   G+ P+
Sbjct: 1016 ITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPS 1050


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/413 (29%), Positives = 198/413 (47%), Gaps = 48/413 (11%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG-EFGVVCKP----- 58
           +L+  L + G  P+VFT N L+  LC  G   +A  +F+ M   N   FG++ +      
Sbjct: 136 SLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMPERNEFSFGILARGYCRAG 195

Query: 59  ---------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIH 103
                          N V   T++ G C+EG VD+A+ L  +M+DE + PNVVT+N+ I 
Sbjct: 196 RSMDALGVLDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARIS 255

Query: 104 GFCYANDWNEAKCLFIEMMDQG----VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
             C A    +A  +F +M ++      +P+ V+F+V+++  C+ G +DEA  L+++M   
Sbjct: 256 ALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCG 315

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           G       YN  + G    G V  A+EL   M   G + N ++Y+I+++G CK  +    
Sbjct: 316 GFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDV 375

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
             +   + S  + PDVV Y +L            A ++ DEM + G A +++ Y   +  
Sbjct: 376 RKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQS 435

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR------SLPR 333
           L K G I EA  L   +    Y LD  + N +IDGLC++ +L +A ++        SL  
Sbjct: 436 LWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLAL 495

Query: 334 GVL-----------------IADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G L                 + D +TY+ ++ ALC +G+ D+A+   L+M  K
Sbjct: 496 GRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGK 548



 Score =  166 bits (421), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 188/423 (44%), Gaps = 60/423 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++R  G  PNV T+N  I+ LC+ G  + A  +F +M     E G+  +P+ V
Sbjct: 230 EAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQE-KWERGLP-RPDQV 287

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  ++ G C+ G VD+A+ L   M+       V +YN  + G        EA+ L  EM
Sbjct: 288 TFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREM 347

Query: 122 MDQGVQPNVVSFNVIMNELCKNGK-----------------------------------M 146
             +GVQPN  ++N+I++ LCK GK                                    
Sbjct: 348 AHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNA 407

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
             A+R+L+ M Q G  PN+F YN L+      GR+  AE L   M   G   +  S +I+
Sbjct: 408 AAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNII 467

Query: 207 INGYCKNKEIEGALSLYSEMLSKG-----------------------IKPDVVIYNTLFI 243
           I+G C+N +++ A+ +   M ++G                         PD + Y+TL  
Sbjct: 468 IDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVS 527

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
            L +  + + A K   EM    ++ D+  Y TFI G CK+G    AV++ R +     + 
Sbjct: 528 ALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKP 587

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             R YN LI G  +        +L   +    +  +V+TYN +I + C  G ++KA  L 
Sbjct: 588 STRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLL 647

Query: 364 LDM 366
            +M
Sbjct: 648 DEM 650



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 155/350 (44%), Gaps = 29/350 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L  ++   G +PN +TYN +++GLC+ G       + + + +G      V  P+ V
Sbjct: 339 EAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSG------VMTPDVV 392

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT+++   C EG    A  +  +M  +   PN  TYN L+     A    EA+ L   M
Sbjct: 393 TYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERM 452

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR------------------- 162
            ++G   +  S N+I++ LC+N K+D A  +++ M   G                     
Sbjct: 453 SEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSS 512

Query: 163 ----PNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
               P+   Y+TL+   C  GR + A++  + M       +   Y   I+GYCK+ +   
Sbjct: 513 KRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSL 572

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A+ +  +M  KG KP    YN L  G  E H  +   KL  EM+  G+  +   Y + I 
Sbjct: 573 AVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIK 632

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
             C+ G + +A+ L   +   +   +I ++  LI   CK+     A  +F
Sbjct: 633 SFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVF 682



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 161/336 (47%), Gaps = 18/336 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN----GEFGVV-- 55
           EA  L  ++   G   +  + N +I+GLCR     +A+++ + M N      G  G    
Sbjct: 444 EAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFL 503

Query: 56  -----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
                      C P+ +TY+T++  LCKEG  D+AK+  L+M  ++I+P+ V Y++ IHG
Sbjct: 504 SLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHG 563

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           +C     + A  +  +M  +G +P+  ++N+++    +    DE  +L+  M   G+ PN
Sbjct: 564 YCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPN 623

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN+L+  FC  G VN+A  L   M       N+ S+ +LI  +CK  +   A  ++ 
Sbjct: 624 VMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFD 683

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
             LS   + + V+Y+ +   L    +   A  + + +    ++   + Y+  I+GLCK  
Sbjct: 684 ASLSTCGQKE-VLYSLMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVD 742

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
            +     L + L +  Y  D  A+  +ID L + G+
Sbjct: 743 EVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGK 778



 Score =  128 bits (322), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/311 (28%), Positives = 149/311 (47%), Gaps = 12/311 (3%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  ++    +E   D  + L+  +      P+V T N L+   C A     A+ +F  M 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           ++    N  SF ++    C+ G+  +A  +L+ M  +    N  V NT++ GFC  G+V+
Sbjct: 178 ER----NEFSFGILARGYCRAGRSMDALGVLDSMPTM----NLVVCNTVVAGFCREGQVD 229

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK---GI-KPDVVIY 238
            AE L   M   G   NV +++  I+  CK   +  A  ++++M  K   G+ +PD V +
Sbjct: 230 EAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTF 289

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           + +  G  E   V+ A  L D M+  G      +Y  ++ GL +NG + EA EL R +  
Sbjct: 290 DVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAH 349

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + +   YN ++DGLCK G+     ++   +  GV+  DVVTY  ++HA C++G    
Sbjct: 350 EGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAA 409

Query: 359 ARDLFLDMEAK 369
           A  +  +M  K
Sbjct: 410 ANRILDEMAQK 420



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 91/220 (41%), Gaps = 40/220 (18%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC+P+  TYN LI G     ++   L L  EM  G G    +C PN +TY ++I   C+ 
Sbjct: 584 GCKPSTRTYNLLIWGFREKHNSDEILKLISEM-KGKG----IC-PNVMTYNSLIKSFCER 637

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV-- 131
           G V+KA  L  +M    I PN+ ++  LI  FC  +D++ A+ +F   +    Q  V+  
Sbjct: 638 GMVNKAMPLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLSTCGQKEVLYS 697

Query: 132 --------------------------------SFNVIMNELCKNGKMDEASRLLELMIQI 159
                                            +  I+  LCK  ++D   RLL+L++  
Sbjct: 698 LMCTQLSTYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVK 757

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           G   +   +  ++D     G+    + L   M  M  + N
Sbjct: 758 GYSFDPAAFMPVIDALSERGKKQHVDMLSQKMMEMAERDN 797


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 179/367 (48%), Gaps = 15/367 (4%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++  +GC P+V  Y+TLING    GH   AL+L   M         +CKPNTV 
Sbjct: 61  AVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---------LCKPNTVC 111

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y   + GLC     +   EL  +M  +  +PN  T++ LI   C  N  + A  +  +M 
Sbjct: 112 YNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQME 171

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
             G +P+ V++N+I+N L + G++D+A RLL  M+    +P+A  +N ++ GFC   R +
Sbjct: 172 KYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWH 228

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A EL   M    C     +++ILI+  C+N  +  A  ++ +M      PD+V Y++L 
Sbjct: 229 DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLL 288

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G  E   VE A +LF  M       D ++Y   + GLC+     +A EL   +      
Sbjct: 289 NGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCP 345

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   +N LI+ LC+ G +  A E+   +P      D+ TYN +I+     G++D A  L
Sbjct: 346 PNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKL 405

Query: 363 FLDMEAK 369
              M  K
Sbjct: 406 LSTMSCK 412



 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 179/337 (53%), Gaps = 15/337 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN  T++ LI+ LC+      A+ + E+M     ++G  C+P+TV Y  II+ L + 
Sbjct: 139 GCSPNEATFSMLISSLCQNNLVDSAVEVLEQME----KYG--CEPDTVNYNIIINSLSER 192

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A  L   M      P+ + +N+++ GFC A  W++A  L  +M         ++F
Sbjct: 193 GRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTF 249

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC+NG ++ A+++ E M +    P+   Y++L++GF   G V  A +LF    S
Sbjct: 250 NILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RS 306

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           M CK ++FSY+ ++ G C+    E A  L +EM+ K   P+ V +N L   L +   V+R
Sbjct: 307 MPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDR 366

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++ ++M  +G   D + Y   I+G  + G + +A++L  T+     + D  +YN  + 
Sbjct: 367 AIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSC---KPDAISYNSTLK 423

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           GLC++ R + A EL   + R     + VT+    H L
Sbjct: 424 GLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLL 460



 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 183/382 (47%), Gaps = 44/382 (11%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+ +TYNT++ GLC      +A    E            C PN VT+ T I   C+ G +
Sbjct: 5   PDTYTYNTVLKGLC------IAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLL 58

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGF------------------------------- 105
           D+A +L  +M      P+VV Y++LI+GF                               
Sbjct: 59  DRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKG 118

Query: 106 -CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
            C A  W +   L  EM+ +G  PN  +F+++++ LC+N  +D A  +LE M + G  P+
Sbjct: 119 LCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPD 178

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN +++     GRV+ A  L   + SM CK +   ++ ++ G+C+ +    A  L +
Sbjct: 179 TVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDASELIA 235

Query: 225 EMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG 284
           +M         + +N L   L +   V  A ++F++M R+    D   Y + ++G  + G
Sbjct: 236 QMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQG 295

Query: 285 YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYN 344
            +  A++LFR+   +  + DI +YN ++ GLC++ R + A EL   +       + VT+N
Sbjct: 296 LVEVAIQLFRS---MPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFN 352

Query: 345 IMIHALCADGKMDKARDLFLDM 366
           I+I++LC  G +D+A ++   M
Sbjct: 353 ILINSLCQKGLVDRAIEVLEQM 374



 Score =  141 bits (356), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 129/237 (54%), Gaps = 12/237 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ L  ++    C     T+N LI+ LC+ G    A  +FE+M          C P+ V
Sbjct: 229 DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPR------YRCTPDIV 282

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++++G  ++G V+ A +LF  M      P++ +YN+++ G C A  W +A  L  EM
Sbjct: 283 TYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEM 339

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN V+FN+++N LC+ G +D A  +LE M   G  P+ F YN L++GF   GR+
Sbjct: 340 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 399

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           + A +L   + +M CK +  SY+  + G C+ +  + A  L +EML     P+ V +
Sbjct: 400 DDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score =  138 bits (347), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 146/276 (52%), Gaps = 6/276 (2%)

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
           + P+  TYN+++ G C A  W EA+ L  EM+     PN V+F   +   C+NG +D A 
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
           +LL+ M + G  P+  +Y+TL++GF   G V++A +L   + +M CK N   Y+  + G 
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNTVCYNAALKGL 119

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C  +  E    L +EM+ KG  P+   ++ L   L + + V+ A ++ ++M+++G   DT
Sbjct: 120 CIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDT 179

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I+ L + G + +A+ L  ++     + D   +N ++ G C++ R   A EL   
Sbjct: 180 VNYNIIINSLSERGRVDDALRLLNSMVC---KPDALGFNAVLKGFCRAERWHDASELIAQ 236

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + R       +T+NI+I  LC +G ++ A  +F  M
Sbjct: 237 MFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQM 272


>gi|224144893|ref|XP_002325452.1| predicted protein [Populus trichocarpa]
 gi|222862327|gb|EEE99833.1| predicted protein [Populus trichocarpa]
          Length = 864

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/401 (30%), Positives = 202/401 (50%), Gaps = 44/401 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +L+ ++   G  P+V TY+++INGLC+ G    A  L  EM     + GV   PN V
Sbjct: 174 EALSLYEEMISDGFLPDVVTYSSIINGLCKRGMLTEAKALLREM----DKMGV--NPNHV 227

Query: 62  TY-----------------------------------TTIIDGLCKEGFVDKAKELFLKM 86
            Y                                   TT+IDGL K G  D+A+ +F  +
Sbjct: 228 VYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTL 287

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
              N  PN +TY ++I G+C   D + A+ L  +M  + V PNVV+++ I+N   K G +
Sbjct: 288 AKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQVVPNVVTYSSIINGYTKKGML 347

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           D A R+++ M+   + PNA++Y TL+DG    G+ + A +L+  M+  G + N F     
Sbjct: 348 DVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAVDLYNEMKLNGLEENSFIVDAF 407

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           IN   + +++E A  L   M+SKG+  D V Y +L  G F+  +   AF + ++M   G+
Sbjct: 408 INNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGFFKTGRESAAFTMAEKMAETGI 467

Query: 267 AADTWAYRTFIDGLCKNG-YIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
             D  AY   I+GL + G Y  E+V  +  +R L    D   YN +I+  CK G+L+ A 
Sbjct: 468 KFDVVAYNVLINGLLRLGKYDAESV--YSGIRELGLAPDRATYNTMINAYCKQGKLENAI 525

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +L+  +    ++ + +T NI++  L   G+ ++A D+  +M
Sbjct: 526 KLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLNEM 566



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/342 (32%), Positives = 179/342 (52%), Gaps = 6/342 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           EPN+ TY TLI+  C+      AL+L+EEM +     G +  P+ VTY++II+GLCK G 
Sbjct: 153 EPNLVTYTTLISAYCKQHGLSEALSLYEEMISD----GFL--PDVVTYSSIINGLCKRGM 206

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           + +AK L  +M    +NPN V Y  L+     A    E+     +M+  GV  ++V    
Sbjct: 207 LTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVVCTT 266

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           +++ L K GK DEA  +   + ++   PN   Y  ++DG+C  G ++ AE L   ME   
Sbjct: 267 LIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDMEKKQ 326

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              NV +YS +INGY K   ++ A+ +  +ML + I P+  IY TL  G  +  + + A 
Sbjct: 327 VVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQDAAV 386

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            L++EM+ +G+  +++    FI+ L +   + EA  L + +      LD   Y  L+DG 
Sbjct: 387 DLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSLMDGF 446

Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
            K+GR   A+ +   +    +  DVV YN++I+ L   GK D
Sbjct: 447 FKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD 488



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/382 (29%), Positives = 187/382 (48%), Gaps = 21/382 (5%)

Query: 2   EAAALFM--KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           E+AA  M  K+   G + +V  YN LINGL R G         E + +G  E G+   P+
Sbjct: 452 ESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYDA-----ESVYSGIRELGLA--PD 504

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             TY T+I+  CK+G ++ A +L+ +MK  ++ PN +T N L+ G   A +   A  +  
Sbjct: 505 RATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAIDVLN 564

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM+  G+ PNV     ++N   K  + D   ++ + ++ +G++ N  VYN+L+   C  G
Sbjct: 565 EMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLCGLG 624

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
              RA  +  +M   G   +  +Y+ LI+G+ K+  IE AL+ Y++ML++G+ P +  YN
Sbjct: 625 MTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIRTYN 684

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L  GL     + +A+++  +M+  G+  D   Y T I G  K G   EA++ +  +   
Sbjct: 685 LLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEMVTK 744

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD-- 357
                   YN LI+   K G++  A EL   +    +  +  TY+I+I   C   K    
Sbjct: 745 GLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVRRVPPNSSTYDILICGWCNLSKQPEL 804

Query: 358 ----------KARDLFLDMEAK 369
                     +AR LF +M  K
Sbjct: 805 DRISKKTYRTEARTLFAEMNEK 826



 Score =  150 bits (379), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 173/370 (46%), Gaps = 17/370 (4%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           L+ ++   G  PNVFT+N L++  C+ GH  +AL+L            V    +TVTY T
Sbjct: 33  LYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDLIRN---------VDIDVDTVTYNT 83

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ- 124
            I G C++G  ++       M  ++   +  T N L+ GFC        + +   ++D  
Sbjct: 84  AIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCRIGSVKYGEWVMDNLIDDM 143

Query: 125 -------GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
                   ++PN+V++  +++  CK   + EA  L E MI  G  P+   Y+++++G C 
Sbjct: 144 NDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISDGFLPDVVTYSSIINGLCK 203

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G +  A+ L   M+ MG   N   Y+IL++   K      +    S+M+  G+  D+V+
Sbjct: 204 RGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWESFIYQSQMIVCGVSFDLVV 263

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             TL  GLF+  + + A  +F  + +     +   Y   IDG CK G +  A  L R + 
Sbjct: 264 CTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDGYCKLGDMDGAESLLRDME 323

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   ++  Y+ +I+G  K G L +A  + + +    ++ +   Y  +I      GK D
Sbjct: 324 KKQVVPNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQNIMPNAYIYATLIDGHLKAGKQD 383

Query: 358 KARDLFLDME 367
            A DL+ +M+
Sbjct: 384 AAVDLYNEMK 393



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 114/458 (24%), Positives = 190/458 (41%), Gaps = 112/458 (24%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           PNV TY+++ING  + G   VA+ + ++M + N        PN   Y T+IDG  K G  
Sbjct: 329 PNVVTYSSIINGYTKKGMLDVAVRIMKKMLDQN------IMPNAYIYATLIDGHLKAGKQ 382

Query: 77  DKAKELFLKMKDENINPNV-----------------------------------VTYNSL 101
           D A +L+ +MK   +  N                                    V Y SL
Sbjct: 383 DAAVDLYNEMKLNGLEENSFIVDAFINNLKRGRKMEEAEGLCKYMMSKGLLLDRVNYTSL 442

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           + GF      + A  +  +M + G++ +VV++NV++N L + GK D A  +   + ++G+
Sbjct: 443 MDGFFKTGRESAAFTMAEKMAETGIKFDVVAYNVLINGLLRLGKYD-AESVYSGIRELGL 501

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   YNT+++ +C  G++  A +L+  M+      N  + +IL+ G  K  E E A+ 
Sbjct: 502 APDRATYNTMINAYCKQGKLENAIKLWNEMKGHSVMPNSITCNILVGGLSKAGETERAID 561

Query: 222 LYSEMLSKGIKPDVVI-----------------------------------YNTLFIGLF 246
           + +EML  GI P+V I                                   YN+L   L 
Sbjct: 562 VLNEMLLWGICPNVTIHRALLNACSKCERADTILQMHKRLVGMGLKANREVYNSLITVLC 621

Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV---------------- 290
            +   +RA  + + M + G++ADT  Y   I G  K+ +I +A+                
Sbjct: 622 GLGMTKRATLVLNNMTKEGISADTVTYNALIHGHFKSSHIEKALATYTQMLNEGVSPGIR 681

Query: 291 -------------------ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
                              E+   ++    + D   YN LI G  K G  K A + +  +
Sbjct: 682 TYNLLLGGLLAAGLMSKAYEILSKMKDSGLDPDASLYNTLISGHGKIGNKKEAIKFYCEM 741

Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               L+    TYN++I      GKMD+AR+L  +M+ +
Sbjct: 742 VTKGLVPKTSTYNVLIEDFAKVGKMDQARELLNEMQVR 779



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 150/320 (46%), Gaps = 11/320 (3%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P    +  +I      G V +  +L+ +M    + PNV T+N L+H +C     + A  L
Sbjct: 9   PTLPLWNRLIYQFNATGLVSQVWDLYSEMLSCGVLPNVFTHNILVHAWCKMGHLSLALDL 68

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            I  +D  +  + V++N  +   C+ G  ++    L +M++     ++F  N L+ GFC 
Sbjct: 69  -IRNVD--IDVDTVTYNTAIWGFCQQGLANQGFGFLSIMVKKDTFFDSFTCNILVKGFCR 125

Query: 178 TGRVNRAEELFVSM--------ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            G V   E +  ++         +   + N+ +Y+ LI+ YCK   +  ALSLY EM+S 
Sbjct: 126 IGSVKYGEWVMDNLIDDMNDDDGTTNLEPNLVTYTTLISAYCKQHGLSEALSLYEEMISD 185

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G  PDVV Y+++  GL +   +  A  L  EM + GV  +   Y   +D L K G   E+
Sbjct: 186 GFLPDVVTYSSIINGLCKRGMLTEAKALLREMDKMGVNPNHVVYAILVDSLFKAGSAWES 245

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
                 + +     D+     LIDGL K+G+   A  +F +L +   I + +TY  MI  
Sbjct: 246 FIYQSQMIVCGVSFDLVVCTTLIDGLFKAGKSDEAEAMFCTLAKLNCIPNNITYTAMIDG 305

Query: 350 LCADGKMDKARDLFLDMEAK 369
            C  G MD A  L  DME K
Sbjct: 306 YCKLGDMDGAESLLRDMEKK 325


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 179/368 (48%), Gaps = 15/368 (4%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  L  ++  +GC P+V  Y+TLING    GH   AL+L   M         +CKPNTV
Sbjct: 243 RAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTM---------LCKPNTV 293

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y   + GLC     +   EL  +M  +  +PN  T++ LI   C  N  + A  +  +M
Sbjct: 294 CYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQM 353

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G +P+ V++N+I+N L + G++D+A RLL  M+    +P+A  +N ++ GFC   R 
Sbjct: 354 EKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERW 410

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A EL   M    C     +++ILI+  C+N  +  A  ++ +M      PD+V Y++L
Sbjct: 411 HDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSL 470

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  E   VE A +LF  M       D ++Y   + GLC+     +A EL   +     
Sbjct: 471 LNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDC 527

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   +N LI+ LC+ G +  A E+   +P      D+ TYN +I+     G++D A  
Sbjct: 528 PPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALK 587

Query: 362 LFLDMEAK 369
           L   M  K
Sbjct: 588 LLSTMSCK 595



 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 104/337 (30%), Positives = 179/337 (53%), Gaps = 15/337 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN  T++ LI+ LC+      A+ + E+M     ++G  C+P+TV Y  II+ L + 
Sbjct: 322 GCSPNEATFSMLISSLCQNNLVDSAVEVLEQME----KYG--CEPDTVNYNIIINSLSER 375

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G VD A  L   M      P+ + +N+++ GFC A  W++A  L  +M         ++F
Sbjct: 376 GRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTF 432

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N++++ LC+NG ++ A+++ E M +    P+   Y++L++GF   G V  A +LF    S
Sbjct: 433 NILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLF---RS 489

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
           M CK ++FSY+ ++ G C+    E A  L +EM+ K   P+ V +N L   L +   V+R
Sbjct: 490 MPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDR 549

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A ++ ++M  +G   D + Y   I+G  + G + +A++L  T+     + D  +YN  + 
Sbjct: 550 AIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTMSC---KPDAISYNSTLK 606

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           GLC++ R + A EL   + R     + VT+    H L
Sbjct: 607 GLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLL 643



 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 188/385 (48%), Gaps = 50/385 (12%)

Query: 17  PNVFTYNTLINGL-----------------------------------CRTGHTIVALNL 41
           P+ +TYNT++ GL                                   C+ G    A+ L
Sbjct: 188 PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 247

Query: 42  FEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
            ++M      +G  C P+ V Y+T+I+G  ++G VD+A +L   M      PN V YN+ 
Sbjct: 248 LDQMP----RYG--CTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAA 298

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           + G C A  W +   L  EM+ +G  PN  +F+++++ LC+N  +D A  +LE M + G 
Sbjct: 299 LKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGC 358

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
            P+   YN +++     GRV+ A  L   + SM CK +   ++ ++ G+C+ +    A  
Sbjct: 359 EPDTVNYNIIINSLSERGRVDDALRL---LNSMVCKPDALGFNAVLKGFCRAERWHDASE 415

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L ++M         + +N L   L +   V  A ++F++M R+    D   Y + ++G  
Sbjct: 416 LIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFS 475

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           + G +  A++LFR+   +  + DI +YN ++ GLC++ R + A EL   +       + V
Sbjct: 476 EQGLVEVAIQLFRS---MPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEV 532

Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
           T+NI+I++LC  G +D+A ++   M
Sbjct: 533 TFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  169 bits (427), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/346 (30%), Positives = 176/346 (50%), Gaps = 16/346 (4%)

Query: 21  TYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAK 80
           ++NTL+ G CR G    A  +        G        N VTYT +IDG C+ G +D A 
Sbjct: 126 SHNTLVAGYCRDGRLADAERVL-------GAARATGAANVVTYTALIDGYCRSGRLDDAL 178

Query: 81  ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
            L   M    + P+  TYN+++ G C A  W EA+ L  EM+     PN V+F   +   
Sbjct: 179 RLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSF 235

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
           C+NG +D A +LL+ M + G  P+  +Y+TL++GF   G V++A +L   + +M CK N 
Sbjct: 236 CQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDL---LNTMLCKPNT 292

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
             Y+  + G C  +  E    L +EM+ KG  P+   ++ L   L + + V+ A ++ ++
Sbjct: 293 VCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQ 352

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           M+++G   DT  Y   I+ L + G + +A+ L  ++     + D   +N ++ G C++ R
Sbjct: 353 MEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVC---KPDALGFNAVLKGFCRAER 409

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
              A EL   + R       +T+NI+I  LC +G ++ A  +F  M
Sbjct: 410 WHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQM 455



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 129/237 (54%), Gaps = 12/237 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A+ L  ++    C     T+N LI+ LC+ G    A  +FE+M          C P+ V
Sbjct: 412 DASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPR------YRCTPDIV 465

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+++++G  ++G V+ A +LF  M      P++ +YN+++ G C A  W +A  L  EM
Sbjct: 466 TYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEM 522

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +   PN V+FN+++N LC+ G +D A  +LE M   G  P+ F YN L++GF   GR+
Sbjct: 523 VGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRL 582

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           + A +L   + +M CK +  SY+  + G C+ +  + A  L +EML     P+ V +
Sbjct: 583 DDALKL---LSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 636



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 130/272 (47%), Gaps = 43/272 (15%)

Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
           +S N+++ +LC   ++ +A R+L+ +       +A  +NTL+ G+C  GR+  AE +  +
Sbjct: 91  ISCNILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL----- 245
             + G   NV +Y+ LI+GYC++  ++ AL L + M    + PD   YNT+  GL     
Sbjct: 150 ARATG-AANVVTYTALIDGYCRSGRLDDALRLIASM---PVAPDTYTYNTVLKGLCIAKK 205

Query: 246 ------------------------FEIHQ------VERAFKLFDEMQRHGVAADTWAYRT 275
                                    +I        ++RA +L D+M R+G   D   Y T
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            I+G  + G++ +A++L  T+     + +   YN  + GLC + R +   EL   + R  
Sbjct: 266 LINGFSEQGHVDQALDLLNTMLC---KPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDME 367
              +  T++++I +LC +  +D A ++   ME
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQME 354


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/364 (32%), Positives = 176/364 (48%), Gaps = 7/364 (1%)

Query: 7   FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
           F K+   G +PN+  + +LI+GLC+ G    A  + EEM   NG      KPN  T+T +
Sbjct: 275 FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG-----WKPNVYTHTAL 328

Query: 67  IDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
           IDGLCK G+ +KA  LFLK+ + +   PNV TY S+I G+C  +  N A+ LF  M +QG
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 388

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + PNV ++  ++N  CK G    A  L+ LM   G  PN + YN  +D  C   R   A 
Sbjct: 389 LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 448

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           EL     S G + +  +Y+ILI   CK  +I  AL+ +  M   G + D+ + N L    
Sbjct: 449 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 508

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
               +++ + +LF  +   G+      Y + I   CK G I  A++ F  ++      D 
Sbjct: 509 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 568

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             Y  LI GLCK   +  A +L+ ++    L    VT   + +  C       A  L   
Sbjct: 569 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEP 628

Query: 366 MEAK 369
           ++ K
Sbjct: 629 LDKK 632



 Score =  168 bits (426), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 183/398 (45%), Gaps = 34/398 (8%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  + M ++  G  P+  T N ++      G    A N+F+EM+               
Sbjct: 165 EAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMV 224

Query: 47  ----------------NGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                            G  + G +  P+  T T I+  LC+ G V++A   F KM D  
Sbjct: 225 IGCFRDGKIQEADRWLTGMIQRGFI--PDNATCTLILTALCENGLVNRAIWYFRKMIDLG 282

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             PN++ + SLI G C      +A  +  EM+  G +PNV +   +++ LCK G  ++A 
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342

Query: 151 RL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
           RL L+L+     +PN   Y +++ G+C   ++NRAE LF  M+  G   NV +Y+ LING
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
           +CK      A  L + M  +G  P++  YN     L +  +   A++L ++    G+ AD
Sbjct: 403 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 462

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
              Y   I   CK   I +A+  F  +    +E D+R  N LI   C+  ++K +  LF+
Sbjct: 463 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 522

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            +    LI    TY  MI   C +G +D A   F +M+
Sbjct: 523 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 560



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 167/352 (47%), Gaps = 10/352 (2%)

Query: 25  LINGLCRTGHTIVA--LNLFEEMANGNGEFGVV-------CKPNTVTYTTIIDGLCKEGF 75
           L NG  +  H ++   L  F E+   N   G+V         P+++T   +++   + G 
Sbjct: 138 LANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGL 197

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A+ +F +M    + P+  +Y  ++ G        EA      M+ +G  P+  +  +
Sbjct: 198 IEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTL 257

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I+  LC+NG ++ A      MI +G +PN   + +L+DG C  G + +A E+   M   G
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYNTLFIGLFEIHQVERA 254
            K NV++++ LI+G CK    E A  L+ +++ S   KP+V  Y ++  G  +  ++ RA
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
             LF  M+  G+  +   Y T I+G CK G    A EL   +    +  +I  YN  ID 
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDS 437

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           LCK  R   A+EL        L AD VTY I+I   C    +++A   F  M
Sbjct: 438 LCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489



 Score =  143 bits (360), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 153/336 (45%), Gaps = 13/336 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF +++  G  PNV TY TLING C+ G    +     E+ N  G+ G +  PN  
Sbjct: 376 RAEMLFSRMKEQGLFPNVNTYTTLINGHCKAG----SFGRAYELMNLMGDEGFM--PNIY 429

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY   ID LCK+    +A EL  K     +  + VTY  LI   C  ND N+A   F  M
Sbjct: 430 TYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRM 489

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G + ++   N+++   C+  KM E+ RL +L++ +G+ P    Y +++  +C  G +
Sbjct: 490 NKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDI 549

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A + F +M+  GC  + F+Y  LI+G CK   ++ A  LY  M+ +G+ P  V   TL
Sbjct: 550 DLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL 609

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTW--AYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                + +    A  L + + +       W    RT +  LC    +  A   F+ L   
Sbjct: 610 AYEYCKRNDSANAMILLEPLDKK-----LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEK 664

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
               D            +SG+  +  +L   + RGV
Sbjct: 665 DSSADRVTLAAFTTACSESGKNNLVTDLTERISRGV 700



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 143/301 (47%), Gaps = 16/301 (5%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y    D L   G + KA E+                  ++  F      NEA  + ++M 
Sbjct: 130 YLVTADSLLANGNLQKAHEVM---------------RCMLRNFSEIGRLNEAVGMVMDMQ 174

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +QG+ P+ ++ N ++    + G ++ A  + + M   GV P++  Y  ++ G    G++ 
Sbjct: 175 NQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQ 234

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A+     M   G   +  + ++++   C+N  +  A+  + +M+  G KP+++ + +L 
Sbjct: 235 EADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLI 294

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF-RTLRILKY 301
            GL +   +++AF++ +EM R+G   + + +   IDGLCK G+  +A  LF + +R   Y
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           + ++  Y  +I G CK  +L  A  LF  +    L  +V TY  +I+  C  G   +A +
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414

Query: 362 L 362
           L
Sbjct: 415 L 415


>gi|449467965|ref|XP_004151692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
 gi|449468117|ref|XP_004151768.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
 gi|449532400|ref|XP_004173169.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At4g17915-like [Cucumis sativus]
          Length = 456

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 168/303 (55%), Gaps = 2/303 (0%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ VTY T+IDG C+   +D A  +  +M++  I+P+V+TYNSLI G        ++  L
Sbjct: 40  PDVVTYNTLIDGYCRFSGMDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDL 99

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F EM+  G+ P++ S+N +M+     GK DEA R+ + +I   + P+   +NT+++G C 
Sbjct: 100 FEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCK 159

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G  + A  LF +++  G    + +Y+ILING CK   +  A+ + +E +  G++P+ V 
Sbjct: 160 HGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVT 219

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y TL    F   Q ER F++F +M+  G A D +AY T      K G   EA      + 
Sbjct: 220 YTTLMKSCFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMI 279

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKM 356
                +DI  YN  I+  CK G+L+ A++LF  + PRG L  DV T++I+ + LC  G +
Sbjct: 280 KNDVGIDITFYNTFINLYCKEGKLEAAYKLFDEIEPRG-LECDVYTHSIITNGLCRVGNI 338

Query: 357 DKA 359
           + A
Sbjct: 339 EGA 341



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/367 (30%), Positives = 190/367 (51%), Gaps = 13/367 (3%)

Query: 1   MEAA-ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M+AA ++  ++R  G  P+V TYN+LI G  R      +L+LFEEM       G+   P+
Sbjct: 58  MDAAYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQS----GIT--PD 111

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             +Y T++      G  D+A  +F  +  ++++P+ VT+N++I+G C     + A  LF 
Sbjct: 112 IWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFR 171

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
            +   G  P +V++N+++N LCK  ++  A R+L   +  G+ PNA  Y TLM     + 
Sbjct: 172 NLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSR 231

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           +  R  E+F  M++ G   + F+Y  +   + K    E A     +M+   +  D+  YN
Sbjct: 232 QYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYN 291

Query: 240 TLFIGLF-EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           T FI L+ +  ++E A+KLFDE++  G+  D + +    +GLC+ G I  A++    +  
Sbjct: 292 T-FINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYT 350

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             +  ++ A NCLID LCK+G++  A  LF S+       D  TY  ++H LC   +   
Sbjct: 351 TGFASNLVALNCLIDRLCKAGQIDRAIRLFESME----TRDSFTYTSLVHNLCKARRFRC 406

Query: 359 ARDLFLD 365
           A  L + 
Sbjct: 407 ASKLLIS 413



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 181/356 (50%), Gaps = 6/356 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TYNTLI+G CR      A ++   M     E G+   P+ +TY ++I G  + 
Sbjct: 37  GVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMR----EAGI--SPDVITYNSLIAGATRN 90

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             ++++ +LF +M    I P++ +YN+L+H F      +EA  +F +++ + + P+ V+F
Sbjct: 91  FSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDEAYRVFKDIILKDLSPHPVTF 150

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LCK+G    A  L   + + G  P    YN L++G C   R+  A  +      
Sbjct: 151 NTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILINGLCKVDRLRAAIRMLNEAMD 210

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + N  +Y+ L+    ++++ E    ++S+M +KG   D   Y T+     ++ + E 
Sbjct: 211 SGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAFDGFAYCTVSGAFLKLGRFEE 270

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A    ++M ++ V  D   Y TFI+  CK G +  A +LF  +     E D+  ++ + +
Sbjct: 271 AKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLFDEIEPRGLECDVYTHSIITN 330

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           GLC+ G ++ A +    +      +++V  N +I  LC  G++D+A  LF  ME +
Sbjct: 331 GLCRVGNIEGAMQHLNCVYTTGFASNLVALNCLIDRLCKAGQIDRAIRLFESMETR 386



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/326 (28%), Positives = 163/326 (50%), Gaps = 10/326 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +F  + +    P+  T+NT+INGLC+ G+T  A+ LF  +       G +  P  V
Sbjct: 130 EAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQ----RHGFI--PQLV 183

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  +I+GLCK   +  A  +  +  D  + PN VTY +L+     +  +     +F +M
Sbjct: 184 TYNILINGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKM 243

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G   +  ++  +     K G+ +EA   +E MI+  V  +   YNT ++ +C  G++
Sbjct: 244 KNKGYAFDGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKL 303

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A +LF  +E  G + +V+++SI+ NG C+   IEGA+   + + + G   ++V  N L
Sbjct: 304 EAAYKLFDEIEPRGLECDVYTHSIITNGLCRVGNIEGAMQHLNCVYTTGFASNLVALNCL 363

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L +  Q++RA +LF+ M+      D++ Y + +  LCK      A +L  +      
Sbjct: 364 IDRLCKAGQIDRAIRLFESME----TRDSFTYTSLVHNLCKARRFRCASKLLISCSRDGM 419

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWEL 327
           ++       +IDGLC SG    A +L
Sbjct: 420 KVLKATRRAVIDGLCSSGFTSEARKL 445



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 126/237 (53%)

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
            N+ +   CK+ +M +A  ++   I+IGV P+   YNTL+DG+C    ++ A  +   M 
Sbjct: 10  LNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMR 69

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             G   +V +Y+ LI G  +N  +E +L L+ EML  GI PD+  YNTL    F + + +
Sbjct: 70  EAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPD 129

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A+++F ++    ++     + T I+GLCK+GY   A+ LFR L+   +   +  YN LI
Sbjct: 130 EAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILI 189

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +GLCK  RL+ A  +        L  + VTY  ++ +     + ++  ++F  M+ K
Sbjct: 190 NGLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNK 246



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/306 (23%), Positives = 135/306 (44%), Gaps = 35/306 (11%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           N  +  FC +    +A+ + I+ +  GV P+VV++N +++  C+   MD A  +L  M +
Sbjct: 11  NICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDAAYSVLYRMRE 70

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G+ P+   YN+L+ G      + ++ +LF  M   G   +++SY+ L++ +    + + 
Sbjct: 71  AGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMHCFFILGKPDE 130

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  ++ +++ K + P  V +NT+  GL +      A  LF  +QRHG       Y   I+
Sbjct: 131 AYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIPQLVTYNILIN 190

Query: 279 GLCKNGYIVEAV-----------------------------------ELFRTLRILKYEL 303
           GLCK   +  A+                                   E+F  ++   Y  
Sbjct: 191 GLCKVDRLRAAIRMLNEAMDSGLEPNAVTYTTLMKSCFRSRQYERGFEIFSKMKNKGYAF 250

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           D  AY  +     K GR + A      + +  +  D+  YN  I+  C +GK++ A  LF
Sbjct: 251 DGFAYCTVSGAFLKLGRFEEAKFCMEQMIKNDVGIDITFYNTFINLYCKEGKLEAAYKLF 310

Query: 364 LDMEAK 369
            ++E +
Sbjct: 311 DEIEPR 316



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 38/202 (18%)

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG--------- 244
           M CK++    +I +  +CK+++++ A ++  + +  G+ PDVV YNTL  G         
Sbjct: 1   MVCKYSTKFLNICVASFCKSQQMQKAEAVIIDGIRIGVLPDVVTYNTLIDGYCRFSGMDA 60

Query: 245 ----LFEIHQ----------------------VERAFKLFDEMQRHGVAADTWAYRTFID 278
               L+ + +                      +E++  LF+EM + G+  D W+Y T + 
Sbjct: 61  AYSVLYRMREAGISPDVITYNSLIAGATRNFSLEQSLDLFEEMLQSGITPDIWSYNTLMH 120

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
                G   EA  +F+ + +         +N +I+GLCK G    A  LFR+L R   I 
Sbjct: 121 CFFILGKPDEAYRVFKDIILKDLSPHPVTFNTMINGLCKHGYTSNAIMLFRNLQRHGFIP 180

Query: 339 DVVTYNIMIHALCADGKMDKAR 360
            +VTYNI+I+ LC   K+D+ R
Sbjct: 181 QLVTYNILINGLC---KVDRLR 199


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 165/320 (51%), Gaps = 4/320 (1%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
           ++   GC PNVF+   L+ GLC    +  AL L + M +  G+    C P+ V Y T+I+
Sbjct: 145 RMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGD----CPPDVVLYNTVIN 200

Query: 69  GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
           G  KEG  DKA   + +M D+ I P+VVTY+S+I   C A   ++A  +   M+  GV P
Sbjct: 201 GFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMP 260

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           N  ++N I++  C +G++ EA   L++M   GV P+    N LMD  C   R   A ++F
Sbjct: 261 NCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIF 320

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
            SM   G K ++ +Y  L+ GY     +     L   M+  GI+P+  ++N L     + 
Sbjct: 321 NSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQ 380

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +V+ A  +F +M++ G++ +   YRT ID LCK G + +AV   + +       DI  Y
Sbjct: 381 EKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVY 440

Query: 309 NCLIDGLCKSGRLKIAWELF 328
             LI G C   + + A EL 
Sbjct: 441 TPLIHGFCTCDKWEKAEELI 460



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 172/347 (49%), Gaps = 7/347 (2%)

Query: 19  VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDK 78
             T+  L+ GLC    T  A+++        G     C PN  + T ++ GLC E    +
Sbjct: 119 AITFTPLLKGLCADKRTSDAMDIVLCRMTQLG-----CIPNVFSCTILLKGLCDENRSQE 173

Query: 79  AKELFLKMKDE--NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
           A EL   M D+  +  P+VV YN++I+GF    D ++A   + EM DQG+ P+VV+++ I
Sbjct: 174 ALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSI 233

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +  LCK   MD+A  +L  M++ GV PN   YN+++ G+C +G++  A      M S G 
Sbjct: 234 IAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGV 293

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
           + +V + ++L++  CKN+    A  +++ M   G+KPD+  Y TL  G      +     
Sbjct: 294 EPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHD 353

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L D M  +G+  +   +   I    K   + EA+ +F  +R      +   Y  +ID LC
Sbjct: 354 LLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVNYRTVIDVLC 413

Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           K GR+  A    + +    L  D++ Y  +IH  C   K +KA +L 
Sbjct: 414 KLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEELI 460



 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 136/278 (48%), Gaps = 3/278 (1%)

Query: 89  ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDE 148
           + + PN+ TY+ LI   C A   +        ++ +G +   ++F  ++  LC + +  +
Sbjct: 78  DEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSD 137

Query: 149 ASRL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG--CKHNVFSYSI 205
           A  + L  M Q+G  PN F    L+ G C   R   A EL   M   G  C  +V  Y+ 
Sbjct: 138 AMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNT 197

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
           +ING+ K  + + A + Y EM  +GI PDVV Y+++   L +   +++A ++ + M ++G
Sbjct: 198 VINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 257

Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
           V  +   Y + + G C +G + EA+   + +     E D+   N L+D LCK+ R   A 
Sbjct: 258 VMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEAR 317

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++F S+ +  L  D+ TY  ++      G + +  DL 
Sbjct: 318 KIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLL 355



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/244 (30%), Positives = 124/244 (50%), Gaps = 3/244 (1%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           V PN+ +++V++   C+ G++D     L  +I+ G R  A  +  L+ G C   R + A 
Sbjct: 80  VTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAM 139

Query: 186 ELFV-SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG--IKPDVVIYNTLF 242
           ++ +  M  +GC  NVFS +IL+ G C     + AL L   M   G    PDVV+YNT+ 
Sbjct: 140 DIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVI 199

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            G F+    ++A+  + EM   G+  D   Y + I  LCK   + +A+E+  T+      
Sbjct: 200 NGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 259

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            + R YN ++ G C SG+L  A    + +    +  DVVT N+++  LC + +  +AR +
Sbjct: 260 PNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKI 319

Query: 363 FLDM 366
           F  M
Sbjct: 320 FNSM 323



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/257 (27%), Positives = 127/257 (49%), Gaps = 6/257 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A + ++   G  P+V TY+++I  LC+      A+ +   M       GV+  PN  
Sbjct: 210 KAYATYHEMFDQGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKN----GVM--PNCR 263

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY +I+ G C  G + +A      M  + + P+VVT N L+   C      EA+ +F  M
Sbjct: 264 TYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSM 323

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
              G++P++ ++  ++      G + E   LL+LM+  G++PN  V+N L+  +    +V
Sbjct: 324 TKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKV 383

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  +F  M   G   N  +Y  +I+  CK   +  A+    +M+++G+ PD+++Y  L
Sbjct: 384 DEAMLVFSKMRQQGLSPNAVNYRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPL 443

Query: 242 FIGLFEIHQVERAFKLF 258
             G     + E+A +L 
Sbjct: 444 IHGFCTCDKWEKAEELI 460



 Score = 45.1 bits (105), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 2/115 (1%)

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL--DIRAYN 309
           E A  +FDE+ R G  A  +     +D + ++          R  R    E+  ++  Y+
Sbjct: 29  EDARHVFDELLRRGKGATIYGLNRALDDVARHSPAAAVSRYNRMARAGADEVTPNLYTYS 88

Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
            LI   C++GRL + +    ++ +     + +T+  ++  LCAD +   A D+ L
Sbjct: 89  VLIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVL 143


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 202/400 (50%), Gaps = 39/400 (9%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF ++ V G  P+V  YN LI+G  R G  + A  +++ +   +  +     P+ 
Sbjct: 201 LDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVY-----PSV 255

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            TY  +I+GLCK G +D++ E++ +MK    +P++ T++S+IHG   A ++N A+ +F E
Sbjct: 256 ETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQE 315

Query: 121 MMDQGVQP----------------------------------NVVSFNVIMNELCKNGKM 146
           M++ G+ P                                  N+VS+N+++  L  N K+
Sbjct: 316 MIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKV 375

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
           ++A    +L+ + G++ ++  Y  L++G C  G +N+A  +    E+ G   + F+YS +
Sbjct: 376 EQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSM 435

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           ++G CK   +E A+ L  +M     K +  ++N+L  G     ++E A  +  EM+    
Sbjct: 436 VHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDC 495

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
           A    +Y T I+GLCK     +A    + +     + D+  Y+ LIDGLC+  ++ +A  
Sbjct: 496 APTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALN 555

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L+       L  D+  +NI+IH LC   K+D A ++F  M
Sbjct: 556 LWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595



 Score =  174 bits (440), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 191/353 (54%), Gaps = 7/353 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           E+  ++ +++     P++FT++++I+GL + G+   A  +F+EM     E G+   P+  
Sbjct: 273 ESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMI----ESGL--SPDVR 326

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ GL + G ++K  EL+  M   N   N+V+YN LI G        +A C +  +
Sbjct: 327 TYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLL 385

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G++ +  ++ +++N LCKNG +++A R+LE     G   + F Y++++ G C  G +
Sbjct: 386 HERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGML 445

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A EL   M+    K N   ++ LINGY +  ++E A+S+  EM SK   P VV YNT+
Sbjct: 446 EQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTI 505

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL +  +   A+    EM   G+  D   Y   IDGLC+   +  A+ L+      + 
Sbjct: 506 INGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRL 565

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           + D++ +N +I GLC + ++ +A E+F  + +   + D+VT+N ++  L   G
Sbjct: 566 KPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAG 618



 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 206/432 (47%), Gaps = 70/432 (16%)

Query: 2   EAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLF---------EEMANGNGE 51
           +A  LF  +  +FGC P + ++N+++N    +     A   F           +   N  
Sbjct: 96  QALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNIL 155

Query: 52  FGVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
             + CK                    P+ ++Y T+I+ L K G +  A ELF +M    +
Sbjct: 156 IKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGV 215

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDE-- 148
           NP+V+ YN LI GF    D+ +A  ++  ++ +  V P+V ++N+++N LCK GK+DE  
Sbjct: 216 NPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESM 275

Query: 149 ---------------------------------ASRLLELMIQIGVRPNAFVYNTLMDGF 175
                                            A ++ + MI+ G+ P+   YN ++ G 
Sbjct: 276 EMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGL 335

Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
             TG++N+  EL+  M    C  N+ SY++LI G   NK++E A+  +  +  +G+K D 
Sbjct: 336 FRTGKLNKCFELWNVMSKNNC-CNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADS 394

Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
             Y  L  GL +   + +A ++ +E +  G   DT+AY + + GLCK G + +AVEL   
Sbjct: 395 TTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQ 454

Query: 296 LRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
           ++  + +L+   +N LI+G  ++ +L+ A  + R +        VV+YN +I+ LC   K
Sbjct: 455 MKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLC---K 511

Query: 356 MDKARDLFLDME 367
            ++  D +L ++
Sbjct: 512 AERFSDAYLSLK 523



 Score =  171 bits (432), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 190/369 (51%), Gaps = 8/369 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA   F   +  G  PN+ TYN LI   C+         L   M      F     P+ +
Sbjct: 132 EAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWM------FENGLNPDIL 185

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y T+I+ L K G +  A ELF +M    +NP+V+ YN LI GF    D+ +A  ++  +
Sbjct: 186 SYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRL 245

Query: 122 M-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           + +  V P+V ++N+++N LCK GK+DE+  +   M +    P+ F +++++ G    G 
Sbjct: 246 LTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGN 305

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
            N AE++F  M   G   +V +Y+ +++G  +  ++     L++ M SK    ++V YN 
Sbjct: 306 FNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVM-SKNNCCNIVSYNM 364

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  GL +  +VE+A   +  +   G+ AD+  Y   I+GLCKNGY+ +A+ +        
Sbjct: 365 LIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEG 424

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +LD  AY+ ++ GLCK G L+ A EL   + +     +   +N +I+      K+++A 
Sbjct: 425 ADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAI 484

Query: 361 DLFLDMEAK 369
            +  +M++K
Sbjct: 485 SVLREMKSK 493



 Score =  164 bits (415), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 195/383 (50%), Gaps = 30/383 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGH-----------------TIVALN-LFEE 44
           A  +F ++   G  P+V TYN +++GL RTG                   IV+ N L + 
Sbjct: 309 AEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQG 368

Query: 45  MANGNGEFGVVC----------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPN 94
           + +       +C          K ++ TY  +I+GLCK G+++KA  +  + ++E  + +
Sbjct: 369 LLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLD 428

Query: 95  VVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
              Y+S++HG C      +A  L  +M     + N   FN ++N   +  K++EA  +L 
Sbjct: 429 TFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLR 488

Query: 155 LMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
            M      P    YNT+++G C   R + A      M   G K ++ +YS+LI+G C+ +
Sbjct: 489 EMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGE 548

Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
           +++ AL+L+ + ++K +KPD+ ++N +  GL    +V+ A ++F +M++     D   + 
Sbjct: 549 KVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHN 608

Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE-LFRSLPR 333
           T ++GL K G  VEA++++  +     + DI +YN    GLC   R+  A E L+ +L R
Sbjct: 609 TIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDR 668

Query: 334 GVLIADVVTYNIMIHALCADGKM 356
           G+L  +  T+N+++ A+  D  +
Sbjct: 669 GIL-PNAPTWNVLVRAVVDDKPL 690



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 159/297 (53%), Gaps = 3/297 (1%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
           + I    K    D+A  LF  M D    NP + ++NS+++ F  +N W EA+  F     
Sbjct: 83  SAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQT 142

Query: 124 QGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
            G+ PN+ ++N+++   CK  + ++   LL  M + G+ P+   Y TL++    +G +  
Sbjct: 143 AGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLD 202

Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLF 242
           A ELF  M   G   +V  Y+ILI+G+ +  +   A  ++  +L++  + P V  YN + 
Sbjct: 203 AVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMI 262

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL ++ +++ + ++++ M+++  + D + + + I GL K G    A ++F+ +      
Sbjct: 263 NGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLS 322

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            D+R YN ++ GL ++G+L   +EL+  + +     ++V+YN++I  L  + K+++A
Sbjct: 323 PDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNN-CCNIVSYNMLIQGLLDNKKVEQA 378



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 112/215 (52%), Gaps = 6/215 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA ++  +++   C P V +YNT+INGLC+      A    +EM     E G+  KP+ +
Sbjct: 482 EAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEML----EEGL--KPDMI 535

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +IDGLC+   VD A  L+ +  ++ + P++  +N +IHG C A   + A  +F +M
Sbjct: 536 TYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM 595

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
                 P++V+ N IM  L K G   EA ++ + +++ G++P+   YN    G C   RV
Sbjct: 596 RQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARV 655

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           + A E        G   N  ++++L+     +K +
Sbjct: 656 SDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPL 690


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  185 bits (470), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 180/312 (57%), Gaps = 6/312 (1%)

Query: 55  VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
           V +P+ V+Y T+++G  K G V KA  LF +MKD  I   + ++N ++ G C     + A
Sbjct: 132 VFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMA 190

Query: 115 KCLFIEMMDQGV-QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
             +F +M   G+  PN++S+ ++++ LCK+ K+D+A  L + M+   + P+   Y  L+D
Sbjct: 191 WEVFKDM--SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALID 248

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IK 232
           G     RV  A +LF    + GC   V +Y+ +I+G CK   IE AL+LY +M+ +  +K
Sbjct: 249 GLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLK 308

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PD+  Y+ L  GL   ++ E+A++L++EM   G + D   Y T +DGLCK+G   +A+E+
Sbjct: 309 PDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEI 368

Query: 293 FRTLRILKY-ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
           FR + +    + ++  Y  LID  CK  RL  A +L + +    L+ D VT+  +I  LC
Sbjct: 369 FRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLC 428

Query: 352 ADGKMDKARDLF 363
            + ++D+A +LF
Sbjct: 429 KESRIDEAHELF 440



 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/367 (30%), Positives = 193/367 (52%), Gaps = 11/367 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ALF +++  G    + ++N ++ GLC  G   +A  +F++M+        +  PN +
Sbjct: 155 KALALFGEMKDSGIA-VLRSHNIVLRGLCSGGKISMAWEVFKDMSG-------IFSPNLI 206

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YT +IDGLCK   VDKA  LF +M D+ I P+VVTY +LI G        EA  LF E 
Sbjct: 207 SYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEA 266

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI-QIGVRPNAFVYNTLMDGFCLTGR 180
             +G  P VV++N +++ LCK G+++ A  L + M+ +  ++P+ F Y+ L++G  L+ R
Sbjct: 267 RAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNR 326

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIYN 239
             +A EL+  M   GC  +V +Y+ L++G CK+   + A+ ++ +M    +  P+V+ Y 
Sbjct: 327 GEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYT 386

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
            L     ++ ++  A KL  EM+   +  D   + T I  LCK   I EA ELF ++   
Sbjct: 387 VLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIG-K 445

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + D   +N ++ G CK  R+  A +L   +        + TY  ++   C  G+   A
Sbjct: 446 TCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDA 505

Query: 360 RDLFLDM 366
             ++ +M
Sbjct: 506 LIMYHEM 512



 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 139/264 (52%), Gaps = 32/264 (12%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
           EA  LF + R  GC P V TYNT+I+GLC+ G    AL L+++M                
Sbjct: 258 EAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSAL 317

Query: 47  -NG-----NGE---------FGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
            NG      GE             C P+ VTY T++DGLCK G  DKA E+F KM   N+
Sbjct: 318 INGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNV 377

Query: 92  -NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
            +PNV+TY  LI  FC  +   +A  L  EM  + + P+ V+F  ++ +LCK  ++DEA 
Sbjct: 378 CDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAH 437

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
            L E  I    +P++ ++NT++ G+C   R++ A++L   M   GC   + +Y+ L+ G+
Sbjct: 438 ELFE-SIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGF 496

Query: 211 CKNKEIEGALSLYSEMLSKGIKPD 234
           C+      AL +Y EM+  G  P+
Sbjct: 497 CRTGRYSDALIMYHEMIEMGFPPE 520



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 148/281 (52%), Gaps = 3/281 (1%)

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
           K      N  T N+L+  +  A    +A   F   M    +P+ VS+N +MN   K G +
Sbjct: 94  KQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDV 153

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
            +A  L   M   G+      +N ++ G C  G+++ A E+F  M  +    N+ SY+I+
Sbjct: 154 KKALALFGEMKDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIM 211

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+G CK+++++ A++L+ +M+ K I PDVV Y  L  GL +  +V+ A+ LF+E +  G 
Sbjct: 212 IDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGC 271

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLKIAW 325
                 Y T IDGLCK G I  A+ L+  + R    + D+  Y+ LI+GL  S R + A+
Sbjct: 272 HPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAY 331

Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           EL+  +       DVVTYN ++  LC  G  DKA ++F  M
Sbjct: 332 ELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKM 372



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%)

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
           HN F+ + L++ Y K + +E A   +   +    +PD V YNTL  G F+   V++A  L
Sbjct: 100 HNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALAL 159

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F EM+  G+A    ++   + GLC  G I  A E+F+ +  + +  ++ +Y  +IDGLCK
Sbjct: 160 FGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGI-FSPNLISYTIMIDGLCK 217

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           S ++  A  LF+ +    +  DVVTY  +I  L    ++ +A DLF +  AK
Sbjct: 218 SRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAK 269


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/346 (32%), Positives = 171/346 (49%), Gaps = 7/346 (2%)

Query: 7    FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
            F K+   G +PN+  + +LI+GLC+ G    A  + EEM   NG      KPN  T+T +
Sbjct: 876  FRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR-NG-----WKPNVYTHTAL 929

Query: 67   IDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
            IDGLCK G+ +KA  LFLK+ + +   PNV TY S+I G+C  +  N A+ LF  M +QG
Sbjct: 930  IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQG 989

Query: 126  VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
            + PNV ++  ++N  CK G    A  L+ LM   G  PN + YN  +D  C   R   A 
Sbjct: 990  LFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAY 1049

Query: 186  ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            EL     S G + +  +Y+ILI   CK  +I  AL+ +  M   G + D+ + N L    
Sbjct: 1050 ELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAF 1109

Query: 246  FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
                +++ + +LF  +   G+      Y + I   CK G I  A++ F  ++      D 
Sbjct: 1110 CRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDS 1169

Query: 306  RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
              Y  LI GLCK   +  A +L+ ++    L    VT   + +  C
Sbjct: 1170 FTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYC 1215



 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 183/398 (45%), Gaps = 34/398 (8%)

Query: 2    EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
            EA  + M ++  G  P+  T N ++      G    A N+F+EM+               
Sbjct: 766  EAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMV 825

Query: 47   ----------------NGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                             G  + G +  P+  T T I+  LC+ G V++A   F KM D  
Sbjct: 826  IGCFRDGKIQEADRWLTGMIQRGFI--PDNATCTLILTALCENGLVNRAIWYFRKMIDLG 883

Query: 91   INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
              PN++ + SLI G C      +A  +  EM+  G +PNV +   +++ LCK G  ++A 
Sbjct: 884  FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 943

Query: 151  RL-LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
            RL L+L+     +PN   Y +++ G+C   ++NRAE LF  M+  G   NV +Y+ LING
Sbjct: 944  RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 1003

Query: 210  YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
            +CK      A  L + M  +G  P++  YN     L +  +   A++L ++    G+ AD
Sbjct: 1004 HCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEAD 1063

Query: 270  TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
               Y   I   CK   I +A+  F  +    +E D+R  N LI   C+  ++K +  LF+
Sbjct: 1064 GVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQ 1123

Query: 330  SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
             +    LI    TY  MI   C +G +D A   F +M+
Sbjct: 1124 LVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 1161



 Score =  150 bits (380), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 174/373 (46%), Gaps = 10/373 (2%)

Query: 4    AALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVA--LNLFEEMANGNGEFGVV------ 55
            A  F K R F     V   + L NG  +  H ++   L  F E+   N   G+V      
Sbjct: 718  AVGFEKFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQ 777

Query: 56   -CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
               P+++T   +++   + G ++ A+ +F +M    + P+  +Y  ++ G        EA
Sbjct: 778  GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 837

Query: 115  KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
                  M+ +G  P+  +  +I+  LC+NG ++ A      MI +G +PN   + +L+DG
Sbjct: 838  DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 897

Query: 175  FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKP 233
             C  G + +A E+   M   G K NV++++ LI+G CK    E A  L+ +++ S   KP
Sbjct: 898  LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKP 957

Query: 234  DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            +V  Y ++  G  +  ++ RA  LF  M+  G+  +   Y T I+G CK G    A EL 
Sbjct: 958  NVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELM 1017

Query: 294  RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
              +    +  +I  YN  ID LCK  R   A+EL        L AD VTY I+I   C  
Sbjct: 1018 NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQ 1077

Query: 354  GKMDKARDLFLDM 366
              +++A   F  M
Sbjct: 1078 NDINQALAFFCRM 1090



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 153/335 (45%), Gaps = 13/335 (3%)

Query: 3    AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
            A  LF +++  G  PNV TY TLING C+ G    +     E+ N  G+ G +  PN  T
Sbjct: 978  AEMLFSRMKEQGLFPNVNTYTTLINGHCKAG----SFGRAYELMNLMGDEGFM--PNIYT 1031

Query: 63   YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
            Y   ID LCK+    +A EL  K     +  + VTY  LI   C  ND N+A   F  M 
Sbjct: 1032 YNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMN 1091

Query: 123  DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
              G + ++   N+++   C+  KM E+ RL +L++ +G+ P    Y +++  +C  G ++
Sbjct: 1092 KTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDID 1151

Query: 183  RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
             A + F +M+  GC  + F+Y  LI+G CK   ++ A  LY  M+ +G+ P  V   TL 
Sbjct: 1152 LALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLA 1211

Query: 243  IGLFEIHQVERAFKLFDEMQRHGVAADTW--AYRTFIDGLCKNGYIVEAVELFRTLRILK 300
                + +    A  L + + +       W    RT +  LC    +  A   F+ L    
Sbjct: 1212 YEYCKRNDSANAMILLEPLDKK-----LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKD 1266

Query: 301  YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
               D            +SG+  +  +L   + RGV
Sbjct: 1267 SSADRVTLAAFTTACSESGKNNLVTDLTERISRGV 1301


>gi|302763351|ref|XP_002965097.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
 gi|300167330|gb|EFJ33935.1| hypothetical protein SELMODRAFT_82937 [Selaginella moellendorffii]
          Length = 540

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 176/352 (50%), Gaps = 10/352 (2%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           +V +Y TLI GL  +G   VA  LFEEM++   +         V YT II+ L K    D
Sbjct: 72  DVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-------VVAYTAIINALFKAHRPD 124

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
           +A   F +M     +P++ T+  +I G C A   N A  +F EM  +G +P+++ +  ++
Sbjct: 125 QAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLV 184

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
           + L K   MDEA +LL+ ++  G++P    Y + + G C  GRV  A +L   M  M C 
Sbjct: 185 DGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREMGKM-CA 243

Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             V     +  GY    +IE AL+L  EM+ KG+  DV  Y  L  GLF + + + A ++
Sbjct: 244 AEVLH--CIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEAQEM 301

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F+ M R G   DT  Y   +   CK G +  A ++   +     E +   YN L+DG   
Sbjct: 302 FEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDGFLG 361

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
             R + A  ++ ++ R ++   +VTYNI++  LC  G+   AR +  +M  +
Sbjct: 362 VNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRER 413



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/398 (28%), Positives = 192/398 (48%), Gaps = 39/398 (9%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A F ++    C+P++ T+  +I GLC+ G    A  +F+EM N  G      KP+ +
Sbjct: 125 QAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEM-NRKG-----WKPDII 178

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA------- 114
            YT+++DGL K   +D+A++L  ++    + P  VTY S I G C      EA       
Sbjct: 179 VYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVREM 238

Query: 115 ---------KCLF----------------IEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
                     C+F                 EM+ +GV  +V  +  +++ L    + DEA
Sbjct: 239 GKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRNDEA 298

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
             + E M++ G  P+   Y  ++  FC  G++  A ++   M++ G + N   Y+ L++G
Sbjct: 299 QEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAACKVVEIMDAAGLEANCHVYNSLMDG 358

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAA 268
           +        A+++YS ML K +KP +V YN L +GL ++ Q   A  +  EM +R G+  
Sbjct: 359 FLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLGLCKLGQTADARLVLREMRERDGIVP 418

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
              +YRT I GL K G   EA+++F  +       D  +   LI  L  + R+  A +L 
Sbjct: 419 TIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVPDCPSCTSLIQALAMADRMDEATQLL 478

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           R +PR  +  D + YN ++  LC   K+  A D+ ++M
Sbjct: 479 RDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVLVEM 516



 Score =  170 bits (431), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 179/385 (46%), Gaps = 39/385 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F ++   G +P++  Y +L++GL +      A  L +E+ +         KP  V
Sbjct: 160 RACEVFQEMNRKGWKPDIIVYTSLVDGLSKASMMDEARKLLQEIVSRG------MKPTEV 213

Query: 62  TYTTIIDGLCKEGFVDKAKELF----------------------------LKMKDENINP 93
           TYT+ I GLCK G V++A +L                             L +KDE +  
Sbjct: 214 TYTSFISGLCKNGRVEEAGKLVREMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKK 273

Query: 94  NVV----TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
            V      Y +LIHG  Y    +EA+ +F  M+ QG  P+  ++ +I++  CK GKM  A
Sbjct: 274 GVTLDVRCYTNLIHGLFYVRRNDEAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAA 333

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
            +++E+M   G+  N  VYN+LMDGF    R   A  ++ +M     K ++ +Y+IL+ G
Sbjct: 334 CKVVEIMDAAGLEANCHVYNSLMDGFLGVNRAREAINVYSTMLRKMVKPSIVTYNILMLG 393

Query: 210 YCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            CK  +   A  +  EM  + GI P +V Y TL  GL +  + + A  +F EM  +GV  
Sbjct: 394 LCKLGQTADARLVLREMRERDGIVPTIVSYRTLIHGLGKAGRADEAIDVFTEMVDNGVVP 453

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           D  +  + I  L     + EA +L R +  +    D  AYN L+  LC   ++  AW++ 
Sbjct: 454 DCPSCTSLIQALAMADRMDEATQLLRDMPRMGITPDALAYNALVKVLCGGAKVGPAWDVL 513

Query: 329 RSLPRGVLIADVVTYNIMIHALCAD 353
             +     + D  T+  M     AD
Sbjct: 514 VEMMDNSCVPDGSTFRAMKLGFKAD 538



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 152/337 (45%), Gaps = 42/337 (12%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           +  +Y  +I GLC  G   +A EL  +M+   I  + VT+  ++   C   + ++A   F
Sbjct: 3   DVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSYF 62

Query: 119 IEMMDQGVQP----NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
                  V P    +VVS+  ++  L  +G++D A  L E M   G +     Y  +++ 
Sbjct: 63  -----HSVSPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQ-CVVAYTAIINA 116

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
                R ++A   F  M +  C  ++ +++++I G CK  ++  A  ++ EM  KG KPD
Sbjct: 117 LFKAHRPDQAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPD 176

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +++Y +L  GL +   ++ A KL  E+   G+      Y +FI GLCKNG + EA +L R
Sbjct: 177 IIVYTSLVDGLSKASMMDEARKLLQEIVSRGMKPTEVTYTSFISGLCKNGRVEEAGKLVR 236

Query: 295 TLR-------------------------ILKYE-------LDIRAYNCLIDGLCKSGRLK 322
            +                           LK E       LD+R Y  LI GL    R  
Sbjct: 237 EMGKMCAAEVLHCIFGGYVLEGKIEEALTLKDEMVKKGVTLDVRCYTNLIHGLFYVRRND 296

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            A E+F ++ R   + D  TY +++   C  GKM  A
Sbjct: 297 EAQEMFEAMVRQGCVPDTRTYGMIVSHFCKQGKMQAA 333



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 67/202 (33%), Positives = 110/202 (54%), Gaps = 2/202 (0%)

Query: 168 YNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML 227
           YN ++ G CL GR +RA EL   ME++G K +  ++ I++   C+ KE++ ALS Y   +
Sbjct: 7   YNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALS-YFHSV 65

Query: 228 SKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIV 287
           S     DVV Y TL +GL +  +++ A +LF+EM   G      AY   I+ L K     
Sbjct: 66  SPRSDLDVVSYTTLIMGLADSGRIDVACELFEEMSSSGSQC-VVAYTAIINALFKAHRPD 124

Query: 288 EAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMI 347
           +A+  F  +   K + D+R +  +I GLCK+G+L  A E+F+ + R     D++ Y  ++
Sbjct: 125 QAIACFERMVARKCDPDLRTFTVVITGLCKAGKLNRACEVFQEMNRKGWKPDIIVYTSLV 184

Query: 348 HALCADGKMDKARDLFLDMEAK 369
             L     MD+AR L  ++ ++
Sbjct: 185 DGLSKASMMDEARKLLQEIVSR 206



 Score = 45.1 bits (105), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 22/61 (36%), Positives = 36/61 (59%)

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           LD+ +YN +I GLC +GR   A+EL + +    +    VT+ I++ ALC   ++D+A   
Sbjct: 2   LDVASYNIVIRGLCLAGRFSRAYELLKEMEALGIKKSQVTHGIILKALCERKEVDQALSY 61

Query: 363 F 363
           F
Sbjct: 62  F 62


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 192/387 (49%), Gaps = 30/387 (7%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------- 55
           A  +F +L++ G  P + T+ T+ING C+ G  + +  L  E+        V        
Sbjct: 259 AYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIID 318

Query: 56  ----------------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
                                 CKP+  TY  +I+ LCKEG  + A     +   + + P
Sbjct: 319 AKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIP 378

Query: 94  NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
           N ++Y  LI  +C + +++ A  L ++M ++G +P++V++ ++++ L  +G MD+A  + 
Sbjct: 379 NNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMK 438

Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
             +I  GV P+A +YN LM G C TGR   A+ LF  M       + + Y+ LI+G+ ++
Sbjct: 439 VKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRS 498

Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
            + + A  ++S  + KG+K DVV +N +  G      ++ A    + M    +  D + Y
Sbjct: 499 GDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTY 558

Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
            T IDG  K   +  A+++FR +   K + ++  Y  LI+G C  G  K+A E F+ +  
Sbjct: 559 STIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQL 618

Query: 334 GVLIADVVTYNIMIHALCADGK-MDKA 359
             L+ +VVTY  +I +L  +   ++KA
Sbjct: 619 RDLVPNVVTYTTLIRSLAKESSTLEKA 645



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/359 (29%), Positives = 175/359 (48%), Gaps = 16/359 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC PN+  YNT+I G C+ G    A  +F+E+            P   T+ T+I+G CKE
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG------FMPTLETFGTMINGFCKE 288

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLI-----HGFCYANDWNEAKCLFIEMMDQGVQP 128
           G    +  L  ++K+  +  +V   N++I     HG  Y  D  E+    I       +P
Sbjct: 289 GDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG--YKVDPAESIGWIIA---NDCKP 343

Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
           +V ++N+++N LCK GK + A   L+   + G+ PN   Y  L+  +C +   + A +L 
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403

Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
           + M   GCK ++ +Y ILI+G   +  ++ A+++  +++ +G+ PD  IYN L  GL + 
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463

Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
            +   A  LF EM    +  D + Y T IDG  ++G   EA ++F        ++D+  +
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523

Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           N +I G C+SG L  A      +    L+ D  TY+ +I        M  A  +F  ME
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582



 Score =  160 bits (405), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/345 (31%), Positives = 169/345 (48%), Gaps = 10/345 (2%)

Query: 18  NVFTYNT--LINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +V  Y+T  L+ G+C  G   V   L E      G +G  C PN V Y TII G CK G 
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIE------GRWGKGCIPNIVFYNTIIGGYCKLGD 255

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A  +F ++K +   P + T+ ++I+GFC   D+  +  L  E+ ++G++ +V   N 
Sbjct: 256 IENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNN 315

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           I++   ++G   + +  +  +I    +P+   YN L++  C  G+   A          G
Sbjct: 316 IIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKG 375

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              N  SY+ LI  YCK+KE + A  L  +M  +G KPD+V Y  L  GL     ++ A 
Sbjct: 376 LIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAV 435

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
            +  ++   GV+ D   Y   + GLCK G  + A  LF  +       D   Y  LIDG 
Sbjct: 436 NMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGF 495

Query: 316 CKSGRLKIAWELFR-SLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +SG    A ++F  S+ +GV + DVV +N MI   C  G +D+A
Sbjct: 496 IRSGDFDEARKVFSLSVEKGVKV-DVVHHNAMIKGFCRSGMLDEA 539



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 163/362 (45%), Gaps = 28/362 (7%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  + +KL   G  P+   YN L++GLC+TG  + A  LF EM + N        P+  
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRN------ILPDAY 486

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+IDG  + G  D+A+++F    ++ +  +VV +N++I GFC +   +EA      M
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++ + P+  +++ I++   K   M  A ++   M +   +PN   Y +L++GFC  G  
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPDVVIYNT 240
             AEE F  M+      NV +Y+ LI    K +  +E A+  +  M++    P+ V +N 
Sbjct: 607 KMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNC 666

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G   + +         +   HG ++    +  F   +  +G+   A           
Sbjct: 667 LLQGF--VKKTSGKVLAEPDGSNHGQSS---LFSEFFHRMKSDGWSDHAA---------- 711

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
                 AYN  +  LC  G +K A      + +     D V++  ++H  C  G   + R
Sbjct: 712 ------AYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQWR 765

Query: 361 DL 362
           ++
Sbjct: 766 NM 767



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 135/289 (46%), Gaps = 9/289 (3%)

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ-----PNVVSFNVIMNEL 140
           +++EN+       + ++H +  +   ++A    +E+ D  V+     P+V++ N +++ L
Sbjct: 125 LRNENVKLTHEALSHVLHAYAESGSLSKA----VEIYDYVVELYDSVPDVIACNSLLSLL 180

Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
            K+ ++ +A ++ + M   G   + +    L+ G C  G+V    +L       GC  N+
Sbjct: 181 VKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNI 240

Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
             Y+ +I GYCK  +IE A  ++ E+  KG  P +  + T+  G  +      + +L  E
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300

Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
           ++  G+    W     ID   ++GY V+  E    +     + D+  YN LI+ LCK G+
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGK 360

Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            ++A        +  LI + ++Y  +I A C   + D A  L L M  +
Sbjct: 361 KEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER 409



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 128/289 (44%), Gaps = 44/289 (15%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFE---------EMANGNGE 51
           + A  LF ++      P+ + Y TLI+G  R+G    A  +F          ++ + N  
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAM 526

Query: 52  FGVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
               C+                    P+  TY+TIIDG  K+  +  A ++F  M+    
Sbjct: 527 IKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKC 586

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCK-NGKMDEAS 150
            PNVVTY SLI+GFC   D+  A+  F EM  + + PNVV++  ++  L K +  +++A 
Sbjct: 587 KPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAV 646

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFC--LTGRV-------NRAE-----ELFVSMESMGC 196
              ELM+     PN   +N L+ GF    +G+V       N  +     E F  M+S G 
Sbjct: 647 YYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGW 706

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
             +  +Y+  +   C +  ++ A     +M+ KG  PD V +  +  G 
Sbjct: 707 SDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGF 755


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 195/430 (45%), Gaps = 68/430 (15%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  LF K+   GCEPN FT+  L+ G CR G     L L  +M       G++  PN V
Sbjct: 165 DARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRT----MGIL--PNNV 218

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y T+I   CKEG    A++L  KM+++ + P+V T+NS I   C +    EA  +F +M
Sbjct: 219 LYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDM 278

Query: 122 -MDQGV---QPNVVSFNVIMNELCKNGKMDEASRL------------------------- 152
            +D+ +    PNV+++ +++   CK G ++EA  L                         
Sbjct: 279 QIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIR 338

Query: 153 ----------LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFS 202
                     L+ M+ IG+ P+ + YN +MDG C  G ++ A  L   M   G   +  +
Sbjct: 339 NGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVT 398

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           YS L++GYC   ++  A +L  EM+S    P+    N L   L++  ++  A  L  +M 
Sbjct: 399 YSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMN 458

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFR-----------------------TLRIL 299
             G   DT      I+ LC NG + +A+E+                         T+   
Sbjct: 459 EKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGK 518

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
           K   D+  Y+ +I GLCK+GRL  A + F  +    L  D   Y+  IH+ C +GK+  A
Sbjct: 519 KCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSA 578

Query: 360 RDLFLDMEAK 369
             +  DME +
Sbjct: 579 FQVLKDMEKR 588



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 199/426 (46%), Gaps = 60/426 (14%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  K+R  G  P+V T+N+ I+ LC +G  + A  +F +M   + E G+   PN +
Sbjct: 235 DAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDM-QIDEELGLP-HPNVI 292

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY  ++ G CKEG +++AK L   MK      N+ +YN  + G        EA  +  EM
Sbjct: 293 TYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEM 352

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G++P++ S+N++M+ LCKNG + +A  L+ LMI+ G+ P+   Y+TL+ G+C  G+V
Sbjct: 353 LGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKV 412

Query: 182 NRAEELFVSMESMGCKHNVFSYSIL----------------------------------- 206
             A  L   M S  C  N ++ ++L                                   
Sbjct: 413 FEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNII 472

Query: 207 INGYCKNKEIEGALSLYSEMLSKG-----------------------IKPDVVIYNTLFI 243
           IN  C N +++ A+ + + M + G                         PD+V Y+T+  
Sbjct: 473 INALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIIS 532

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GL +  +++ A K F EM   G+  D+  Y TFI   C+ G I  A ++ + +       
Sbjct: 533 GLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNK 592

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
            ++ YN LI GL    ++   + L   +    +  DV TYN M++ LC  G+++ A  + 
Sbjct: 593 TLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVL 652

Query: 364 LDMEAK 369
            +M  K
Sbjct: 653 DEMLQK 658



 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 189/386 (48%), Gaps = 30/386 (7%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  +  ++   G EP++++YN +++GLC+ G    A  L   M       G++  P+T
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRN----GIL--PDT 396

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VTY+T++ G C +G V +A  L  +M   N +PN  T N L+H        +EA+ L  +
Sbjct: 397 VTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQK 456

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV------------------- 161
           M ++G   + V+ N+I+N LC NG++D+A  ++  M   G                    
Sbjct: 457 MNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTIS 516

Query: 162 ----RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
                P+   Y+T++ G C  GR++ A++ F+ M S G + +   Y   I+ +C+  +I 
Sbjct: 517 GKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKIS 576

Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
            A  +  +M  +G    +  YN+L +GL   +Q+   + L DEM+  GV+ D   Y   +
Sbjct: 577 SAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHML 636

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
           + LC+ G I +A  +   +       +I ++  LI   CK+   K + E+F  +   V  
Sbjct: 637 NCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFE-IALNVCG 695

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
                Y +M + L   GK+ +A++LF
Sbjct: 696 HKEALYTLMFNELLVGGKVAEAKELF 721



 Score =  164 bits (414), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 176/369 (47%), Gaps = 29/369 (7%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
           N+ +YN  + GL R G  + A  + +EM       G+  +P+  +Y  ++DGLCK G + 
Sbjct: 325 NLESYNIWLLGLIRNGKLLEAWIVLKEM------LGIGIEPDIYSYNIVMDGLCKNGMLS 378

Query: 78  KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
            A+ L   M    I P+ VTY++L+HG+C      EA  L  EM+     PN  + NV++
Sbjct: 379 DARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLL 438

Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-- 195
           + L K G++ EA  LL+ M + G   +    N +++  C  G++++A E+   M + G  
Sbjct: 439 HSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSA 498

Query: 196 ---------------------CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
                                C  ++ +YS +I+G CK   ++ A   + EM+SKG++PD
Sbjct: 499 ALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPD 558

Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
             IY+T         ++  AF++  +M++ G       Y + I GL     I E   L  
Sbjct: 559 SAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLID 618

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
            +R      D+  YN +++ LC+ GR+  A  +   + +  +  ++ ++ I+I A C   
Sbjct: 619 EMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKAC 678

Query: 355 KMDKARDLF 363
               + ++F
Sbjct: 679 DFKASHEVF 687



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 174/383 (45%), Gaps = 45/383 (11%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           +P+++ YN L+    R     +   L+++M            P   T+  +I  LC  G 
Sbjct: 109 QPSIYLYNVLLKSCIRENRVELVSWLYKDMVLAR------VSPEAYTFNLLIGLLCDSGH 162

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           ++ A+ELF KM      PN  T+  L+ G+C A   ++   L  +M   G+ PN V +N 
Sbjct: 163 LEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNT 222

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM---E 192
           +++  CK GK  +A +L++ M + G+ P+   +N+ +   C +G++  A  +F  M   E
Sbjct: 223 LISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDE 282

Query: 193 SMGCKH-NVFSYSILINGYCKNKEIEGALSL----------------------------- 222
            +G  H NV +Y +++ G+CK   +E A +L                             
Sbjct: 283 ELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKL 342

Query: 223 ------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                   EML  GI+PD+  YN +  GL +   +  A  L   M R+G+  DT  Y T 
Sbjct: 343 LEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTL 402

Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
           + G C  G + EA  L   +       +    N L+  L K GR+  A  L + +     
Sbjct: 403 LHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGY 462

Query: 337 IADVVTYNIMIHALCADGKMDKA 359
             D VT NI+I+ALC +G++DKA
Sbjct: 463 GVDTVTCNIIINALCNNGQLDKA 485



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 173/389 (44%), Gaps = 64/389 (16%)

Query: 1   MEAAALFMKLRVF-GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           +  A + M L +  G  P+  TY+TL++G C  G    A NL  EM + N      C PN
Sbjct: 377 LSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNN------CSPN 430

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND--------- 110
           T T   ++  L KEG + +A+ L  KM ++    + VT N +I+  C             
Sbjct: 431 TYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVN 490

Query: 111 --WNEAKCL-------FIEMMDQGVQ-----PNVVSFNVIMNELCKNGKMDEASRLLELM 156
             W             FI ++D  +      P++V+++ I++ LCK G++D+A +    M
Sbjct: 491 GMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEM 550

Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
           +  G++P++ +Y+T +  FC  G+++ A ++   ME  GC   + +Y+ LI G     +I
Sbjct: 551 MSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQI 610

Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
                L  EM  KG+ PDV  YN +   L E  ++  A  + DEM + G++ +  ++R  
Sbjct: 611 FELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRIL 670

Query: 277 IDGLCK----------------------------------NGYIVEAVELFRTLRILKYE 302
           I   CK                                   G + EA ELF T     ++
Sbjct: 671 IKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFD 730

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
           +    Y  LID LCK  +L+ A ++   L
Sbjct: 731 IGNFLYKDLIDRLCKDEKLEAASDVLHRL 759



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 154/338 (45%), Gaps = 41/338 (12%)

Query: 70  LCKEGFVDKAKELFLKMKD--ENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
           L K GF +KA   F  ++       P++  YN L+      N       L+ +M+   V 
Sbjct: 85  LAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVS 144

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P   +FN+++  LC +G +++A  L + M   G  PN F +  L+ G+C  G  ++  EL
Sbjct: 145 PEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASKGLEL 204

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI---------------- 231
              M +MG   N   Y+ LI+ +CK  +   A  L  +M   G+                
Sbjct: 205 LGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCG 264

Query: 232 -----------------------KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
                                   P+V+ Y  + +G  +   +E A  L D M+R+    
Sbjct: 265 SGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFI 324

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           +  +Y  ++ GL +NG ++EA  + + +  +  E DI +YN ++DGLCK+G L  A  L 
Sbjct: 325 NLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLM 384

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
             + R  ++ D VTY+ ++H  C+ GK+ +A +L  +M
Sbjct: 385 GLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEM 422



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 159/344 (46%), Gaps = 20/344 (5%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN---------GNGEF 52
           EA  L  K+   G   +  T N +IN LC  G    A+ +   M           GN   
Sbjct: 449 EAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFI 508

Query: 53  GVV--------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHG 104
           G+V        C P+ VTY+TII GLCK G +D AK+ F++M  + + P+   Y++ IH 
Sbjct: 509 GLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHS 568

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
           FC     + A  +  +M  +G    + ++N ++  L    ++ E   L++ M + GV P+
Sbjct: 569 FCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPD 628

Query: 165 AFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYS 224
              YN +++  C  GR+N A  +   M   G   N+ S+ ILI  +CK  + + +  ++ 
Sbjct: 629 VCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFE 688

Query: 225 EMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             L+  G K    +Y  +F  L    +V  A +LF+           + Y+  ID LCK+
Sbjct: 689 IALNVCGHKE--ALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKD 746

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWEL 327
             +  A ++   L    Y+ D  ++  +IDG  K G   +A EL
Sbjct: 747 EKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADEL 790



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 129/281 (45%), Gaps = 40/281 (14%)

Query: 15  CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
           C P++ TY+T+I+GLC+ G    A   F EM +         +P++  Y T I   C+EG
Sbjct: 520 CTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKG------LQPDSAIYDTFIHSFCREG 573

Query: 75  FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
            +  A ++   M+    N  + TYNSLI G    N   E   L  EM ++GV P+V ++N
Sbjct: 574 KISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYN 633

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC------------------ 176
            ++N LC+ G++++A  +L+ M+Q G+ PN   +  L+  FC                  
Sbjct: 634 HMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV 693

Query: 177 ----------------LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
                           + G+V  A+ELF +          F Y  LI+  CK++++E A 
Sbjct: 694 CGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAAS 753

Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            +   ++ KG + D   +  +  G  ++     A +L + M
Sbjct: 754 DVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERM 794



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 40/220 (18%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           GC   + TYN+LI GL           L +EM     E GV   P+  TY  +++ LC+ 
Sbjct: 589 GCNKTLQTYNSLILGLGSKNQIFELYGLIDEMR----EKGV--SPDVCTYNHMLNCLCEG 642

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWN--------------------- 112
           G ++ A  +  +M  + I+PN+ ++  LI  FC A D+                      
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYT 702

Query: 113 -------------EAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
                        EAK LF   +D+        +  +++ LCK+ K++ AS +L  +I  
Sbjct: 703 LMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDK 762

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           G + +   +  ++DGF   G  + A+EL   M  M  + N
Sbjct: 763 GYQFDPASFMPVIDGFGKMGNKHVADELAERMMEMASESN 802


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 194/362 (53%), Gaps = 8/362 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           ++ +++  G +P+++TYN L+NGL  +     A  +FE M  G         P+TVTY  
Sbjct: 207 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK------IVPDTVTYNI 260

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA-NDWNEAKCLFIEMMDQ 124
           +I G CK G + KA E F  M+ +N+ P+ +TY +LI   CY+  D++    L++EM ++
Sbjct: 261 MIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQA-CYSERDFDTCLSLYLEMEER 319

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++    S+++++  LCK  K  EA  + E M Q G R N  +Y  L+D +   G +  A
Sbjct: 320 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEA 379

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  M++ G + +  +YS+L+NG CK+  ++  + L+    +KG+  + + Y +L  G
Sbjct: 380 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDG 439

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  ++E A  LF+EM   G A D++ Y   ID L K+G I +A+ LF  +     +  
Sbjct: 440 LGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQT 499

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  +  LIDGL K  + + A + +  +    +   V ++  +   LC  GK+ +A  +  
Sbjct: 500 VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILD 559

Query: 365 DM 366
           D+
Sbjct: 560 DL 561



 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 174/326 (53%), Gaps = 7/326 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L++++   G E    +Y+ +I GLC+    + A  +FE M N  G     C+ N   YT
Sbjct: 311 SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM-NQKG-----CRANVAIYT 364

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +ID   K G +++A  LF +MK+E   P+ VTY+ L++G C +   ++   LF    ++
Sbjct: 365 ALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNK 424

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV  N + +  +++ L K G++++A  L E M + G   +++ YN ++D     G++++A
Sbjct: 425 GVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQA 484

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  ME  GC   V++++ILI+G  K  + E A+  + +M+ KGI P V  +  L IG
Sbjct: 485 LALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIG 544

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    +V RA K+ D++   G+  +T A+   I+ LCK   I EA +L   +     E+ 
Sbjct: 545 LCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIVDRGREIP 603

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRS 330
            R    LI+ L K+G   +  +L  S
Sbjct: 604 GRIRTVLINALRKAGNSDLVIKLMHS 629



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 177/357 (49%), Gaps = 9/357 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  + +   +P+  TY TLI            L+L+ EM     E G+   P+  
Sbjct: 273 KAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEME----ERGLEIPPH-- 326

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ +I GLCK+    +A  +F  M  +    NV  Y +LI  +       EA  LF  M
Sbjct: 327 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 386

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G +P+ V+++V++N LCK+G++D+   L +     GV  NA  Y +L+DG    GR+
Sbjct: 387 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 446

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE LF  M   GC  + + Y+ +I+   K+ +I+ AL+L+  M  +G    V  +  L
Sbjct: 447 EDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTIL 506

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+ H+ E A K +D+M   G+     ++R    GLC  G +  A ++   L  +  
Sbjct: 507 IDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGI 566

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMD 357
            +   A+  +I+ LCK+ R+K A +L   +  RG  I   +   ++I+AL   G  D
Sbjct: 567 -IPETAFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIR-TVLINALRKAGNSD 621



 Score =  150 bits (380), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 4/305 (1%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++I      G V++   ++ +MK+  I+P++ TYN L++G   +     A+ +F E+MD 
Sbjct: 190 SLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF-EVMDG 248

Query: 125 G-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR-VN 182
           G + P+ V++N+++   CK GK+ +A      M    V+P+   Y TL+   C + R  +
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQA-CYSERDFD 307

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
               L++ ME  G +    SYS++I G CK ++   A +++  M  KG + +V IY  L 
Sbjct: 308 TCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALI 367

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +   +E A +LF+ M+  G   D   Y   ++GLCK+G + + +ELF   R     
Sbjct: 368 DSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVA 427

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           ++   Y  LIDGL K+GR++ A  LF  +       D   YN +I AL   GK+D+A  L
Sbjct: 428 INAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALAL 487

Query: 363 FLDME 367
           F  ME
Sbjct: 488 FGRME 492



 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 153/307 (49%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + ++I+ L     + K + +F ++KD  +       NSLI  F       E   ++  M 
Sbjct: 153 HVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMK 212

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ P++ ++N ++N L  +  ++ A ++ E+M    + P+   YN ++ G+C  G++ 
Sbjct: 213 ENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQ 272

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A E F  ME    K +  +Y  LI      ++ +  LSLY EM  +G++     Y+ + 
Sbjct: 273 KAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVI 332

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  +   A+ +F+ M + G  A+   Y   ID   KNG + EA+ LF  ++   +E
Sbjct: 333 GGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFE 392

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y+ L++GLCKSGRL    ELF       +  + + Y  +I  L   G+++ A +L
Sbjct: 393 PDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENL 452

Query: 363 FLDMEAK 369
           F +M  K
Sbjct: 453 FEEMSEK 459


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 194/362 (53%), Gaps = 8/362 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           ++ +++  G +P+++TYN L+NGL  +     A  +FE M  G         P+TVTY  
Sbjct: 205 VWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGK------IVPDTVTYNI 258

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA-NDWNEAKCLFIEMMDQ 124
           +I G CK G + KA E F  M+ +N+ P+ +TY +LI   CY+  D++    L++EM ++
Sbjct: 259 MIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQA-CYSERDFDTCLSLYLEMEER 317

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G++    S+++++  LCK  K  EA  + E M Q G R N  +Y  L+D +   G +  A
Sbjct: 318 GLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEA 377

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  M++ G + +  +YS+L+NG CK+  ++  + L+    +KG+  + + Y +L  G
Sbjct: 378 MRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDG 437

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L +  ++E A  LF+EM   G A D++ Y   ID L K+G I +A+ LF  +     +  
Sbjct: 438 LGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQT 497

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
           +  +  LIDGL K  + + A + +  +    +   V ++  +   LC  GK+ +A  +  
Sbjct: 498 VYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILD 557

Query: 365 DM 366
           D+
Sbjct: 558 DL 559



 Score =  168 bits (425), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 174/326 (53%), Gaps = 7/326 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           +L++++   G E    +Y+ +I GLC+    + A  +FE M N  G     C+ N   YT
Sbjct: 309 SLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETM-NQKG-----CRANVAIYT 362

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +ID   K G +++A  LF +MK+E   P+ VTY+ L++G C +   ++   LF    ++
Sbjct: 363 ALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNK 422

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           GV  N + +  +++ L K G++++A  L E M + G   +++ YN ++D     G++++A
Sbjct: 423 GVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQA 482

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             LF  ME  GC   V++++ILI+G  K  + E A+  + +M+ KGI P V  +  L IG
Sbjct: 483 LALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIG 542

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           L    +V RA K+ D++   G+  +T A+   I+ LCK   I EA +L   +     E+ 
Sbjct: 543 LCLCGKVARACKILDDLAPMGIIPET-AFEDMINTLCKAQRIKEACKLADGIVDRGREIP 601

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRS 330
            R    LI+ L K+G   +  +L  S
Sbjct: 602 GRIRTVLINALRKAGNSDLVIKLMHS 627



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 177/357 (49%), Gaps = 9/357 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  + +   +P+  TY TLI            L+L+ EM     E G+   P+  
Sbjct: 271 KAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEME----ERGLEIPPH-- 324

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ +I GLCK+    +A  +F  M  +    NV  Y +LI  +       EA  LF  M
Sbjct: 325 SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERM 384

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            ++G +P+ V+++V++N LCK+G++D+   L +     GV  NA  Y +L+DG    GR+
Sbjct: 385 KNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRI 444

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             AE LF  M   GC  + + Y+ +I+   K+ +I+ AL+L+  M  +G    V  +  L
Sbjct: 445 EDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALFGRMEEEGCDQTVYTFTIL 504

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GLF+ H+ E A K +D+M   G+     ++R    GLC  G +  A ++   L  +  
Sbjct: 505 IDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLCLCGKVARACKILDDLAPMGI 564

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMD 357
            +   A+  +I+ LCK+ R+K A +L   +  RG  I   +   ++I+AL   G  D
Sbjct: 565 -IPETAFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIR-TVLINALRKAGNSD 619



 Score =  150 bits (380), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 159/305 (52%), Gaps = 4/305 (1%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           ++I      G V++   ++ +MK+  I+P++ TYN L++G   +     A+ +F E+MD 
Sbjct: 188 SLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVF-EVMDG 246

Query: 125 G-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR-VN 182
           G + P+ V++N+++   CK GK+ +A      M    V+P+   Y TL+   C + R  +
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQA-CYSERDFD 305

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
               L++ ME  G +    SYS++I G CK ++   A +++  M  KG + +V IY  L 
Sbjct: 306 TCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALI 365

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
               +   +E A +LF+ M+  G   D   Y   ++GLCK+G + + +ELF   R     
Sbjct: 366 DSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVA 425

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
           ++   Y  LIDGL K+GR++ A  LF  +       D   YN +I AL   GK+D+A  L
Sbjct: 426 INAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALAL 485

Query: 363 FLDME 367
           F  ME
Sbjct: 486 FGRME 490



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 153/307 (49%)

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           + ++I+ L     + K + +F ++KD  +       NSLI  F       E   ++  M 
Sbjct: 151 HVSLIELLTFSADLVKIRLVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMK 210

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ P++ ++N ++N L  +  ++ A ++ E+M    + P+   YN ++ G+C  G++ 
Sbjct: 211 ENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQ 270

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
           +A E F  ME    K +  +Y  LI      ++ +  LSLY EM  +G++     Y+ + 
Sbjct: 271 KAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVI 330

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  +   A+ +F+ M + G  A+   Y   ID   KNG + EA+ LF  ++   +E
Sbjct: 331 GGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFE 390

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            D   Y+ L++GLCKSGRL    ELF       +  + + Y  +I  L   G+++ A +L
Sbjct: 391 PDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENL 450

Query: 363 FLDMEAK 369
           F +M  K
Sbjct: 451 FEEMSEK 457


>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
          Length = 475

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 186/371 (50%), Gaps = 8/371 (2%)

Query: 1   MEAAALFMKLRVFGCEPNV--FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           ++ AA  +K     C  +V   + + +++G C++G    A  L +EM       GV  K 
Sbjct: 47  LDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMP----RHGV--KV 100

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N + Y +++D   +E   D+  E+   M++E I P V TY  L+ G   A D  + + +F
Sbjct: 101 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 160

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  + +  +V  ++ ++N  C+ G +  AS + +  +  G+ PN   Y  L++GFC  
Sbjct: 161 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 220

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++  AE L   M+  G   N   ++ +I+GYC+   ++ AL +   M   GI+ DV  Y
Sbjct: 221 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 280

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  GL   ++++ A  L   M   GV  +  +Y T I   C  G +VEA  LFR +  
Sbjct: 281 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 340

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              E  +  YN ++DG  K G ++ A      + +  L+ D+ +Y  ++H  C +GK+D 
Sbjct: 341 NGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDV 400

Query: 359 ARDLFLDMEAK 369
           A  LF +M+ +
Sbjct: 401 ALRLFEEMKQR 411



 Score =  174 bits (442), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 174/344 (50%), Gaps = 6/344 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP V TY  L++GL           +FEEM + N         +   Y+++I+  C+ 
Sbjct: 132 GIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN------LSGDVYFYSSVINAYCRA 185

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A E+F +     I PN  TY +LI+GFC       A+ L  +M  +GV  N + F
Sbjct: 186 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 245

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C+   +D+A  +  +M ++G+  + + YNTL  G     R++ A+ L   M  
Sbjct: 246 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 305

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + N  SY+ LI+ +C   ++  A  L+ EM   G +P +V YN +  G  +   +  
Sbjct: 306 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 365

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +  +EM++ G+  D ++Y   + G C NG +  A+ LF  ++    + ++ AY  LI 
Sbjct: 366 AERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALIS 425

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           GL K GR + A++L+ ++    L  D   Y+ ++ +L  D K +
Sbjct: 426 GLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 469



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++   G EP++ TYN +++G  + G    A     EM     + G+V  P+ 
Sbjct: 329 VEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME----KKGLV--PDI 382

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++ G C  G VD A  LF +MK     PN+V Y +LI G        EA  L+  
Sbjct: 383 YSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDN 442

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           M+  G+ P+   ++ ++  L  + K +   R
Sbjct: 443 MLGDGLTPDDALYSALVGSLHTDKKQNVKPR 473


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  185 bits (469), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/397 (30%), Positives = 194/397 (48%), Gaps = 41/397 (10%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL   +  F CEP+V++YN +IN  C  G +  AL+L   M   NG     CKP+  T+ 
Sbjct: 309 ALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIE-NG-----CKPSIATFC 362

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           TIID  CKEG V+ A++ F +++D  ++ N + YN +I G+  A D ++A  LF EM  +
Sbjct: 363 TIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTK 422

Query: 125 GVQPNVVSFN-----------------------------------VIMNELCKNGKMDEA 149
            + P+ ++FN                                   V +  LC  G+ DEA
Sbjct: 423 DIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEA 482

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING 209
            +LLE ++  G+ P+   +N+++  +   G   RA   +  M   G   +  + S L+  
Sbjct: 483 MKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLIS 542

Query: 210 YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
             +   ++ A     +M+ KG     + +  L  G F I  V  A  L++EM+  GV  D
Sbjct: 543 LVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPD 602

Query: 270 TWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFR 329
             A+  FI+GLC +G + +A ++F  +    +  +   YN LI G CK G+L  A +L R
Sbjct: 603 AVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVR 662

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
            + +  L+ D+ T N++I  LC  G+M  A + F+DM
Sbjct: 663 EMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDM 699



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 170/338 (50%), Gaps = 9/338 (2%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVA-LNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           FG  P+  T ++L+  L R G    A + L++ +  G   F V      + +T ++DG  
Sbjct: 527 FGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKG---FPV----TNMAFTVLLDGYF 579

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           + G V+ A+ L+ +MK   + P+ V + + I+G C +    +A  +F +M+ +G  PN  
Sbjct: 580 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNF 639

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
            +N ++   CK GK++EA +L+  M + G+ P+ F  N ++ G C  GR+  A E F+ M
Sbjct: 640 VYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDM 699

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
             MG   ++ +Y+ LI+GYCK  ++ GA  L  +M   G +PD+  YN    G   + ++
Sbjct: 700 CRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKI 759

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            RA  + +E+   G+  +T  Y T I+ +C N  +  A+ L   L  + +  +    N L
Sbjct: 760 NRAVMILEELISVGIVPNTVTYNTMINAVC-NVILDHAMILTAKLLKMAFVPNTVTVNVL 818

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           +   CK G  + A    + L    L  D  T+ +M  A
Sbjct: 819 LSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRA 856



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 169/358 (47%), Gaps = 7/358 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L   L   G  P+V  +N++I      G    A   +  M     +FG+   P++ 
Sbjct: 481 EAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMV----KFGLT--PSSS 534

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T ++++  L ++G +D+A      M D+      + +  L+ G+      N A+ L+ EM
Sbjct: 535 TCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEM 594

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +GV P+ V+F   +N LC +G M +A  +   M++ G  PN FVYN+L+ GFC  G++
Sbjct: 595 KGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKL 654

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           N A +L   M   G   ++F+ +++I G CK   ++ A+  + +M   G+ PD+V YNTL
Sbjct: 655 NEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTL 714

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  +   V  A  L  +M   G   D   Y   I G C    I  AV +   L  +  
Sbjct: 715 IDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGI 774

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +   YN +I+ +C    L  A  L   L +   + + VT N+++   C  G  +KA
Sbjct: 775 VPNTVTYNTMINAVCNV-ILDHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKA 831



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 8/228 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   G  PN F YN+LI G C+ G    AL L  EM N  G       P+  
Sbjct: 621 DAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREM-NKRGLL-----PDIF 674

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T   II GLCK+G +  A E F+ M    ++P++VTYN+LI G+C A D   A  L ++M
Sbjct: 675 TVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKM 734

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            D G +P++ ++N+ ++  C   K++ A  +LE +I +G+ PN   YNT+++  C    +
Sbjct: 735 SDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC-NVIL 793

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           + A  L   +  M    N  + ++L++ +CK    E A+  + + LS+
Sbjct: 794 DHAMILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAI-FWGQKLSE 840



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 94/403 (23%), Positives = 167/403 (41%), Gaps = 41/403 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +  K+R  G  PN    + L   L R G       LF ++          C PN  
Sbjct: 236 EALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRKGP-----C-PNNF 289

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+  +I   C++G+    + L   M      P+V +YN +I+  C     + A  L   M
Sbjct: 290 TFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLM 349

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           ++ G +P++ +F  I++  CK G ++ A +  + +  +G+  N  VYN ++ G+     +
Sbjct: 350 IENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDI 409

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCK-NKEIEG---------------------- 218
           ++A  LF  M +     +  +++ L+ G+ +  KE +G                      
Sbjct: 410 SQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVT 469

Query: 219 ------------ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
                       A+ L   +L KGI P VV +N++          ERAF  +  M + G+
Sbjct: 470 VAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGL 529

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
              +    + +  L + G + EA      +    + +   A+  L+DG  + G + +A  
Sbjct: 530 TPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAES 589

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L+  +    +  D V +   I+ LC  G M  A D+F DM  K
Sbjct: 590 LWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRK 632



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 136/295 (46%)

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T++    K     +A E+  KM++  + PN    + L      A D      LF +++ +
Sbjct: 223 TLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVRK 282

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G  PN  +FN+++ E C+ G       LL +M +    P+ + YN +++  CL G+ + A
Sbjct: 283 GPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYA 342

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M   GCK ++ ++  +I+ +CK   +E A   + E+   G+  + ++YN +  G
Sbjct: 343 LHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISG 402

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
             +   + +A  LF+EM+   +  D   + T + G  + G   +   L R L +     D
Sbjct: 403 YVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHD 462

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
               +  + GLC +GR   A +L  +L    +   VV +N +I A    G  ++A
Sbjct: 463 SSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERA 517



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 125/271 (46%)

Query: 99  NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
           ++L+  F  +    EA  +  +M + GV PN  + +++   L + G      +L   +++
Sbjct: 222 DTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVVR 281

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            G  PN F +N L+  FC  G     E L   M    C+ +V+SY+I+IN  C   +   
Sbjct: 282 KGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSY 341

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           AL L + M+  G KP +  + T+     +   VE A K FDE++  G++ +T  Y   I 
Sbjct: 342 ALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMIS 401

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G  K   I +A  LF  +R      D   +N L+ G  + G+ +    L R L    L+ 
Sbjct: 402 GYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLH 461

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           D    ++ +  LC  G+ D+A  L  ++  K
Sbjct: 462 DSSLCDVTVAGLCWAGRYDEAMKLLENLLGK 492



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 80/203 (39%)

Query: 167 VYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM 226
           V +TLM  F  +     A E+   M  +G   N  + SIL     +  +      L+ ++
Sbjct: 220 VLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDV 279

Query: 227 LSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYI 286
           + KG  P+   +N L +             L   M +     D ++Y   I+  C  G  
Sbjct: 280 VRKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQS 339

Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
             A+ L   +     +  I  +  +ID  CK G +++A + F  +    L  + + YNIM
Sbjct: 340 SYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 399

Query: 347 IHALCADGKMDKARDLFLDMEAK 369
           I        + +A  LF +M  K
Sbjct: 400 ISGYVKARDISQANLLFEEMRTK 422


>gi|357153642|ref|XP_003576519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Brachypodium distachyon]
          Length = 620

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 117/384 (30%), Positives = 190/384 (49%), Gaps = 24/384 (6%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF+ ++  G +PN++TYN L++  C+       L L++E+       G+V  PN 
Sbjct: 212 IEAERLFIMMKETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKS----GLV--PNA 265

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V  TT+I G      +   K  FL+M    I P V  YNSLI G   +    EA  ++ +
Sbjct: 266 VIITTLIGGFFLANRISDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQD 325

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+ P+  + ++I+  LC  G++  A+R LELM Q G+  NA  YN L+D  C  G 
Sbjct: 326 MTRVGLCPDEFTCSIIVRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGN 385

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           +  A      M  +G + NV +YS LI+G+ K +++E A+ +Y EM++KG++P+V+ Y  
Sbjct: 386 LAEALATCTRMNEVGIEPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTA 445

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           +  G  +   ++ AF+L  EM   G++++       +DGLC+   + +AV         K
Sbjct: 446 MIHGHAKFGDLDAAFRLHKEMAEKGISSNAITVSVLVDGLCRESRVQDAVMFIMKYAGQK 505

Query: 301 YELDIRA------------------YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVT 342
              DI +                  Y  LI GL   G+   A + F  +    ++ D  T
Sbjct: 506 KPGDINSFCSNYTTEEDCSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFT 565

Query: 343 YNIMIHALCADGKMDKARDLFLDM 366
           Y+++I   C  G +  A  L+ DM
Sbjct: 566 YSLLIRGQCMLGYVLNAMMLYADM 589



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 192/368 (52%), Gaps = 9/368 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A ++F +L      P +   N +++GL +         LF+EM +     G+V  P+ V
Sbjct: 111 DALSVFCRLPTL---PALPACNAILDGLVKARRFDRVWKLFDEMLSR----GMV--PSLV 161

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY T+++    EG + KA E++ +M    I+PNVVTY+++I   C      EA+ LFI M
Sbjct: 162 TYNTLVNACRHEGDMTKAWEVWNQMVARRIDPNVVTYSTMICVLCEEGCVIEAERLFIMM 221

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
            + GVQPN+ ++N +M+  CK   ++    L + +++ G+ PNA +  TL+ GF L  R+
Sbjct: 222 KETGVQPNLYTYNALMSSHCKRDGVNRTLTLYQELLKSGLVPNAVIITTLIGGFFLANRI 281

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           +  +  F+ M   G    V  Y+ LI+G  ++   + AL++Y +M   G+ PD    + +
Sbjct: 282 SDVKNAFLEMHRYGIAPTVPVYNSLIDGAFRSGYAQEALTVYQDMTRVGLCPDEFTCSII 341

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             GL    QV+ A +  + MQ+ G+  +  AY   ID  CK+G + EA+     +  +  
Sbjct: 342 VRGLCCGGQVQVATRFLELMQQSGINLNAAAYNALIDEHCKDGNLAEALATCTRMNEVGI 401

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
           E ++  Y+ LIDG  K  +++IA  ++  +    +  +V+TY  MIH     G +D A  
Sbjct: 402 EPNVVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFR 461

Query: 362 LFLDMEAK 369
           L  +M  K
Sbjct: 462 LHKEMAEK 469



 Score =  106 bits (265), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 29/254 (11%)

Query: 1   MEAAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           ++ A  F++L +  G   N   YN LI+  C+ G      NL E +A       V  +PN
Sbjct: 351 VQVATRFLELMQQSGINLNAAAYNALIDEHCKDG------NLAEALATCTRMNEVGIEPN 404

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
            VTY+++IDG  K+  ++ A  ++++M  + + PNV+TY ++IHG     D + A  L  
Sbjct: 405 VVTYSSLIDGHSKKRKMEIAMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHK 464

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP---------------- 163
           EM ++G+  N ++ +V+++ LC+  ++ +A  ++ +M   G +                 
Sbjct: 465 EMAEKGISSNAITVSVLVDGLCRESRVQDA--VMFIMKYAGQKKPGDINSFCSNYTTEED 522

Query: 164 ----NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
               N+  Y TL+ G  + G+ + A + F  M       + F+YS+LI G C    +  A
Sbjct: 523 CSILNSVTYMTLIYGLYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNA 582

Query: 220 LSLYSEMLSKGIKP 233
           + LY++M+  G+KP
Sbjct: 583 MMLYADMVKIGVKP 596



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 87/182 (47%), Gaps = 24/182 (13%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++M++   G EPNV TY  +I+G  + G    A  L +EMA    E G+    N +T
Sbjct: 424 AMGIYMEMVAKGVEPNVLTYTAMIHGHAKFGDLDAAFRLHKEMA----EKGI--SSNAIT 477

Query: 63  YTTIIDGLCKEGFVDKAKELFLKM----KDENINP--------------NVVTYNSLIHG 104
            + ++DGLC+E  V  A    +K     K  +IN               N VTY +LI+G
Sbjct: 478 VSVLVDGLCRESRVQDAVMFIMKYAGQKKPGDINSFCSNYTTEEDCSILNSVTYMTLIYG 537

Query: 105 FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPN 164
                 ++EA   F  M +  + P+  ++++++   C  G +  A  L   M++IGV+P 
Sbjct: 538 LYIDGQYHEAGKFFSCMRESDMVPDSFTYSLLIRGQCMLGYVLNAMMLYADMVKIGVKPR 597

Query: 165 AF 166
            +
Sbjct: 598 RY 599


>gi|414888175|tpg|DAA64189.1| TPA: hypothetical protein ZEAMMB73_647521 [Zea mays]
          Length = 667

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 183/351 (52%), Gaps = 7/351 (1%)

Query: 20  FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKA 79
           FTY+  I+ LC++      + L E +     +FG  C P+       +D LCK   +  A
Sbjct: 232 FTYSRWISALCQSER----IELVERLLADMDKFG--CFPDIWACNIYVDCLCKHNRLHDA 285

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            +    M     NP+VVTY +++   C    + EA  L+ EM+ +G++P++V+  V++  
Sbjct: 286 LKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRGLKPDIVACGVLIFG 345

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           LCK+ K+DEA  L   M+ + +  N  +YN L+ GF  +G +N+A ++   M + GC+ +
Sbjct: 346 LCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPD 405

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGI-KPDVVIYNTLFIGLFEIHQVERAFKLF 258
           V +Y+I +N YC    I+ A  L  EM   GI  PD   YN +  GL + HQ++RAF   
Sbjct: 406 VVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFV 465

Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
            +    G   D  +    ID  CK   +  A++LF+ +     + D   Y  LI+GL   
Sbjct: 466 SDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGV 525

Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           G   +A E+F  + +  ++ +V  YNIM+H LC  G+ ++A+ +FL M  K
Sbjct: 526 GYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQK 576



 Score =  181 bits (458), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 181/351 (51%), Gaps = 7/351 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+V TY T++  LC       A+ L+EEM           KP+ V    +I GLCK 
Sbjct: 296 GTNPDVVTYTTVVGCLCDNKQFAEAVELWEEMVRRG------LKPDIVACGVLIFGLCKS 349

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
             VD+A EL L+M   N+  NV  YN+LI GF  +   N+A  +   M   G +P+VV++
Sbjct: 350 DKVDEAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRTNGCEPDVVTY 409

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           N+ +N  C  G + EA +L+E M   G V P+ + YN ++ G C   +++RA        
Sbjct: 410 NIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSDHM 469

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
            +G   ++ S +ILI+ +CK K++  AL L+ EM  KGI+ D V Y TL  GL+ +    
Sbjct: 470 EVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYY 529

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
            A ++F++M +  V  +   Y   +  LCK G   +A ++F  +   +   DI  +N LI
Sbjct: 530 LAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLI 589

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
             L K  R   A +LFR +    +  D +T+  +I  L  +GK  +A +++
Sbjct: 590 YWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVW 640



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 150/293 (51%), Gaps = 7/293 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  L +++     E NV  YN LI+G  R+G    A  +   M   NG     C+P+ V
Sbjct: 354 EAFELALRMLSLNLELNVCIYNALISGFLRSGSINKAFKIISVMRT-NG-----CEPDVV 407

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENI-NPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           TY   ++  C  G + +A++L  +M+   I NP+  +YN ++ G C A+  + A     +
Sbjct: 408 TYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRYSYNQMLKGLCKAHQLDRAFGFVSD 467

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
            M+ G   ++VS N++++  CK  K+  A +L + M   G++ +A  Y TL++G    G 
Sbjct: 468 HMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQADAVTYGTLINGLYGVGY 527

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
              AEE+F  M       NV  Y+I+++  CK  + E A  ++ +M+ K + PD++ +NT
Sbjct: 528 YYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNT 587

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           L   L +  +   A  LF +M   G+  D+  +R  I GL + G   +A E++
Sbjct: 588 LIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEGKATQAYEVW 640



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 164/363 (45%), Gaps = 9/363 (2%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTII 67
           ++R  G   +   Y  L++G  R G     ++ F+EM  +G  EFGV        Y   I
Sbjct: 151 RVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGV-------DYNRFI 203

Query: 68  DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
             L K    D  ++ +    D+       TY+  I   C +      + L  +M   G  
Sbjct: 204 GVLVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCF 263

Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
           P++ + N+ ++ LCK+ ++ +A + LE M   G  P+   Y T++   C   +   A EL
Sbjct: 264 PDIWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVEL 323

Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
           +  M   G K ++ +  +LI G CK+ +++ A  L   MLS  ++ +V IYN L  G   
Sbjct: 324 WEEMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLR 383

Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-YELDIR 306
              + +AFK+   M+ +G   D   Y   ++  C  G I EA +L   + +      D  
Sbjct: 384 SGSINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEMEMSGIVNPDRY 443

Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           +YN ++ GLCK+ +L  A+             D+V+ NI+I A C   K+  A  LF +M
Sbjct: 444 SYNQMLKGLCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEM 503

Query: 367 EAK 369
             K
Sbjct: 504 GYK 506



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 136/288 (47%)

Query: 80  KELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNE 139
            E   +++ + +  +   Y  L+ G+  A  ++     F EM+  G +   V +N  +  
Sbjct: 146 SEFLERVRSQGVALHRSLYRILLSGYVRAGKFDSVIHTFDEMVTSGCREFGVDYNRFIGV 205

Query: 140 LCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHN 199
           L KN   D   +   + +  G    +F Y+  +   C + R+   E L   M+  GC  +
Sbjct: 206 LVKNCCFDLVEKYYSVALDKGFCLTSFTYSRWISALCQSERIELVERLLADMDKFGCFPD 265

Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
           +++ +I ++  CK+  +  AL     M  +G  PDVV Y T+   L +  Q   A +L++
Sbjct: 266 IWACNIYVDCLCKHNRLHDALKTLENMWIRGTNPDVVTYTTVVGCLCDNKQFAEAVELWE 325

Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
           EM R G+  D  A    I GLCK+  + EA EL   +  L  EL++  YN LI G  +SG
Sbjct: 326 EMVRRGLKPDIVACGVLIFGLCKSDKVDEAFELALRMLSLNLELNVCIYNALISGFLRSG 385

Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            +  A+++   +       DVVTYNI ++  C  G + +A  L  +ME
Sbjct: 386 SINKAFKIISVMRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEME 433



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 132/260 (50%), Gaps = 5/260 (1%)

Query: 10  LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
           +R  GCEP+V TYN  +N  C TG    A  L EEM     E   +  P+  +Y  ++ G
Sbjct: 397 MRTNGCEPDVVTYNIRLNHYCNTGMIKEAEKLIEEM-----EMSGIVNPDRYSYNQMLKG 451

Query: 70  LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
           LCK   +D+A        +     ++V+ N LI  FC A   + A  LF EM  +G+Q +
Sbjct: 452 LCKAHQLDRAFGFVSDHMEVGGFCDIVSCNILIDAFCKAKKVSSALKLFKEMGYKGIQAD 511

Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
            V++  ++N L   G    A  + E M++  V PN  +YN ++   C  G+  +A+++F+
Sbjct: 512 AVTYGTLINGLYGVGYYYLAEEIFEQMLKARVVPNVNLYNIMLHNLCKAGQFEQAQKIFL 571

Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
            M       ++ +++ LI    K      A+ L+ +M ++GI+PD + +  L  GL E  
Sbjct: 572 QMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDMTARGIEPDSLTFRYLISGLLEEG 631

Query: 250 QVERAFKLFDEMQRHGVAAD 269
           +  +A+++++ M  +G+  D
Sbjct: 632 KATQAYEVWEYMLENGIILD 651



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 53/174 (30%), Positives = 98/174 (56%), Gaps = 6/174 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  LF ++   G + +  TY TLINGL   G+  +A  +FE+M        VV  PN  
Sbjct: 495 SALKLFKEMGYKGIQADAVTYGTLINGLYGVGYYYLAEEIFEQMLKAR----VV--PNVN 548

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y  ++  LCK G  ++A+++FL+M  + ++P+++T+N+LI+     +   EA  LF +M
Sbjct: 549 LYNIMLHNLCKAGQFEQAQKIFLQMIQKEVSPDIITFNTLIYWLGKCSRAIEAIDLFRDM 608

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
             +G++P+ ++F  +++ L + GK  +A  + E M++ G+  +  V + L+  F
Sbjct: 609 TARGIEPDSLTFRYLISGLLEEGKATQAYEVWEYMLENGIILDRDVSDRLISMF 662


>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g61400-like [Glycine max]
          Length = 498

 Score =  185 bits (469), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 190/376 (50%), Gaps = 17/376 (4%)

Query: 2   EAAALFMKLRVFGC-EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           EA  +F ++R  G   PN++TY TL++G    G       L+ +M            P+ 
Sbjct: 82  EAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLYCDMLKPG------LYPDV 135

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           VT+ T+ID L K G +  A   F  M   ++ PN   YNSLIHG+C A D  EA  L +E
Sbjct: 136 VTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLE 195

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G+  +VV++N+++  LC   +++EA  L+E M ++ V  N+  +N ++DG C  G 
Sbjct: 196 MERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDEVEVFANSVXFNVVIDGCCKIGD 255

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           + +A E+   M     + NV ++SILI+G+C    +  A+ LY+EM+ KGI PDVV Y  
Sbjct: 256 MEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTA 315

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           L  G  ++   + AF+L  EM   G++ + +     IDGL K+G   +A+++F       
Sbjct: 316 LIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAG 375

Query: 301 Y---ELDIR-------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           Y   ++D R        Y  LI GLC+ G +  A + F  +       D++ Y  M+ A 
Sbjct: 376 YPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAH 435

Query: 351 CADGKMDKARDLFLDM 366
                M     L  DM
Sbjct: 436 FQSKHMIDVMMLHADM 451



 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 158/300 (52%), Gaps = 16/300 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  L +++   G   +V TYN LI GLC       A+ L E+M        V    N+
Sbjct: 187 LEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMDE------VEVFANS 240

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
           V +  +IDG CK G ++KA E+  +M +E I PNV+T++ LI GFC   +   A  L+ E
Sbjct: 241 VXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTE 300

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M+ +G+ P+VV++  +++  CK G   EA RL + M+  G+ PN F  + ++DG    GR
Sbjct: 301 MVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGR 360

Query: 181 VNRAEELFV----------SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
            N A ++F+           M+S  C  N   Y+ILI G C++  I  A   ++EM   G
Sbjct: 361 TNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNG 420

Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
            KPD+++Y T+    F+   +     L  +M + GV  +T+ YR    G  +NGY+  A+
Sbjct: 421 FKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNTFIYRVLSRGYRENGYLKSAL 480



 Score =  144 bits (362), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 160/345 (46%), Gaps = 46/345 (13%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P       ++ GL K    D   E+++ M     +P V+TY  L++  C   D++ A+ +
Sbjct: 2   PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKV 61

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV-RPNAFVYNTLMDGFC 176
           F EM+++G++PNVV +          G+M EA  +   M + GV  PN + Y TLMDG+ 
Sbjct: 62  FDEMLERGIEPNVVIY----------GQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYS 111

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFS---------------------------------- 202
           + G V R   L+  M   G   +V +                                  
Sbjct: 112 MMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGH 171

Query: 203 -YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            Y+ LI+GYCK  ++  A+ L  EM   GI  DVV YN L  GL +I ++E A  L ++M
Sbjct: 172 AYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKM 231

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
               V A++  +   IDG CK G + +A+E+   +     E ++  ++ LIDG C  G +
Sbjct: 232 DEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILIDGFCNKGNV 291

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           + A  L+  +    ++ DVVTY  +I   C  G   +A  L  +M
Sbjct: 292 RAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEM 336



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 101/225 (44%), Gaps = 26/225 (11%)

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           N L+ G   T   +   E++V M S      V +Y IL+N  C   +   A  ++ EML 
Sbjct: 8   NALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQKVFDEMLE 67

Query: 229 KGIKPDVVIY--------------------------NTLFIGLFEIHQVERAFKLFDEMQ 262
           +GI+P+VVIY                           TL  G   +  V+R F L+ +M 
Sbjct: 68  RGIEPNVVIYGQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRVFYLYCDML 127

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
           + G+  D   + T ID L K G +  A   F  +       +  AYN LI G CK+G L 
Sbjct: 128 KPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGYCKAGDLL 187

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A  L   + R  + +DVVTYNI+I  LC   ++++A  L   M+
Sbjct: 188 EAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEEAMGLMEKMD 232



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 81/166 (48%), Gaps = 6/166 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFG-----VVC 56
           EA  L  ++   G  PN+FT + +I+GL + G T  A+ +F E   G G  G       C
Sbjct: 328 EAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLE-KTGAGYPGDKMDSRFC 386

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
            PN++ Y  +I GLC++G + KA + F +MK     P+++ Y +++     +    +   
Sbjct: 387 SPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMM 446

Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVR 162
           L  +M+  GV  N   + V+     +NG +  A    E +++ G+ 
Sbjct: 447 LHADMVKMGVIQNTFIYRVLSRGYRENGYLKSALMCSEYLMEYGIH 492


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 190/384 (49%), Gaps = 29/384 (7%)

Query: 9   KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA---------------NGNGEFG 53
           +L++ G  P V TY  LING C+ G       L  EMA               +   ++G
Sbjct: 265 ELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYG 324

Query: 54  VV--------------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN 99
           +V              C P+  TY  +I+  CK G +++A EL  K K+  + PN  +Y 
Sbjct: 325 LVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYT 384

Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
            L+H +C   D+ +A  +   + + G + ++VS+   ++ +   G++D A  + E M++ 
Sbjct: 385 PLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEK 444

Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
           GV P+A +YN LM G C  GR+   + L   M     + +V+ ++ LI+G+ +N E++ A
Sbjct: 445 GVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEA 504

Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
           + ++  ++ KG+ P +V YN +  G  +  ++  A    +EM     A D + Y T IDG
Sbjct: 505 IKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDG 564

Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
             K   +  A+++F  +   K++ ++  Y  LI+G CK   +  A ++F  +    L+ +
Sbjct: 565 YVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPN 624

Query: 340 VVTYNIMIHALCADGKMDKARDLF 363
           VVTY  ++      GK ++A  +F
Sbjct: 625 VVTYTTLVGGFFKAGKPERATSIF 648



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/349 (28%), Positives = 182/349 (52%), Gaps = 6/349 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EAA +  ++   GC P++ TYN +IN  C+ G    A  L E+      E G++  PN  
Sbjct: 328 EAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAK----ERGLL--PNKF 381

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +YT ++   CK+G   KA  +  ++ +     ++V+Y + IHG   A + + A  +  +M
Sbjct: 382 SYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKM 441

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           M++GV P+   +N++M+ LCK G++     LL  M+   V+P+ +V+ TL+DGF   G +
Sbjct: 442 MEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGEL 501

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A ++F  +   G    +  Y+ +I G+CK  ++  ALS  +EM S    PD   Y+T+
Sbjct: 502 DEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTV 561

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G  + H +  A K+F +M +H    +   Y + I+G CK   ++ A ++F  ++    
Sbjct: 562 IDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDL 621

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
             ++  Y  L+ G  K+G+ + A  +F  +     + +  T++ +I+ L
Sbjct: 622 VPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670



 Score =  175 bits (443), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 188/434 (43%), Gaps = 69/434 (15%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA---NGNG------- 50
            A  LF  +R +  C P     N L+NGL ++G   VAL L+++M    +G G       
Sbjct: 148 RALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYT 207

Query: 51  -----------------------EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMK 87
                                   +G  C P+ V Y  IIDG CK+G +  A     ++K
Sbjct: 208 TSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELK 267

Query: 88  DENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ-------------------- 127
            + + P V TY +LI+GFC A ++     L  EM  +G+                     
Sbjct: 268 MKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVT 327

Query: 128 ---------------PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
                          P++ ++N+++N  CK G+++EA  LLE   + G+ PN F Y  LM
Sbjct: 328 EAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLM 387

Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
             +C  G   +A  +   +  +G K ++ SY   I+G     EI+ AL +  +M+ KG+ 
Sbjct: 388 HAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVF 447

Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
           PD  IYN L  GL +  ++     L  EM    V  D + + T IDG  +NG + EA+++
Sbjct: 448 PDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKI 507

Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
           F+ +     +  I  YN +I G CK G++  A      +       D  TY+ +I     
Sbjct: 508 FKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVK 567

Query: 353 DGKMDKARDLFLDM 366
              M  A  +F  M
Sbjct: 568 QHDMSSALKMFGQM 581



 Score =  169 bits (429), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 193/377 (51%), Gaps = 22/377 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A+ +  ++   G + ++ +Y   I+G+   G   VAL + E+M     E GV   P+ 
Sbjct: 397 VKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMM----EKGVF--PDA 450

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             Y  ++ GLCK+G +   K L  +M D N+ P+V  + +LI GF    + +EA  +F  
Sbjct: 451 QIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKV 510

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           ++ +GV P +V +N ++   CK GKM +A   L  M  +   P+ + Y+T++DG+     
Sbjct: 511 IIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHD 570

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           ++ A ++F  M     K NV +Y+ LING+CK  ++  A  ++S M S  + P+VV Y T
Sbjct: 571 MSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTT 630

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNG---YIVEA-------- 289
           L  G F+  + ERA  +F+ M  +G   +   +   I+GL        ++E         
Sbjct: 631 LVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENER 690

Query: 290 ---VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNI 345
              ++ F  + +  ++  I AYN +I  LCK G +  A  L  + L +G LI D V +  
Sbjct: 691 SLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLI-DSVCFTA 749

Query: 346 MIHALCADGKMDKARDL 362
           ++H LC  GK  + R++
Sbjct: 750 LLHGLCHKGKSKEWRNI 766



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 146/309 (47%), Gaps = 7/309 (2%)

Query: 57  KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKD-ENINPNVVTYNSLIHGFCYANDWNEAK 115
           KP    ++ +I    + G +D+A +LF  +++  N  P  V  N L++G   +   + A 
Sbjct: 127 KPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVAL 186

Query: 116 CLFIEMM--DQGVQPNVVSF--NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
            L+ +M+  D G    V ++  ++++  LC  GK++E  RL++        P+   YN +
Sbjct: 187 QLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMI 246

Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
           +DG+C  G +  A      ++  G    V +Y  LING+CK  E E    L +EM ++G+
Sbjct: 247 IDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGL 306

Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
             +V ++N +    ++   V  A ++   M   G   D   Y   I+  CK G I EA E
Sbjct: 307 NMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADE 366

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGR-LKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
           L    +      +  +Y  L+   CK G  +K +  LFR    G   +D+V+Y   IH +
Sbjct: 367 LLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEK-SDLVSYGAFIHGV 425

Query: 351 CADGKMDKA 359
              G++D A
Sbjct: 426 VVAGEIDVA 434



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 126/273 (46%), Gaps = 5/273 (1%)

Query: 96  VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
           V ++SL+        + E + +   M  Q ++P   +F+ ++    ++G +D A +L   
Sbjct: 96  VAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHT 155

Query: 156 MIQI-GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM----ESMGCKHNVFSYSILINGY 210
           + ++    P     N L++G   +G+V+ A +L+  M    +  G   + ++ SI++ G 
Sbjct: 156 VREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGL 215

Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
           C   +IE    L      K   P VV YN +  G  +   ++ A +  +E++  GV    
Sbjct: 216 CNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTV 275

Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
             Y   I+G CK G      +L   +      ++++ +N +ID   K G +  A E+ R 
Sbjct: 276 ETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRR 335

Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           +       D+ TYNIMI+  C  G++++A +L 
Sbjct: 336 MAEMGCGPDITTYNIMINFSCKGGRIEEADELL 368



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 22/206 (10%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPN 59
           + A  +F  ++ F   PNV TY TL+ G  + G    A ++FE M  NG       C PN
Sbjct: 607 IRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNG-------CLPN 659

Query: 60  TVTYTTIIDGL--------------CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
             T+  +I+GL               KE       + F  M  +  +  +  YNS+I   
Sbjct: 660 DATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCL 719

Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
           C     + A+ L  +M+ +G   + V F  +++ LC  GK  E   ++   +       A
Sbjct: 720 CKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTA 779

Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSM 191
             Y+  +D +   GR++ A  +  ++
Sbjct: 780 VKYSLTLDKYLYQGRLSEASVILQTL 805



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 8/192 (4%)

Query: 186 ELFVSMESMGCKH---NVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNTL 241
           E+ + +E+M  +H      ++S LI  Y ++  ++ AL L+  +       P  V  N L
Sbjct: 113 EIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLL 172

Query: 242 FIGLFEIHQVERAFKLFDEMQRH----GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
             GL +  +V+ A +L+D+M +     G   D +     + GLC  G I E   L +   
Sbjct: 173 LNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRW 232

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                  +  YN +IDG CK G L+ A      L    ++  V TY  +I+  C  G+ +
Sbjct: 233 GKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFE 292

Query: 358 KARDLFLDMEAK 369
               L  +M A+
Sbjct: 293 AVDQLLTEMAAR 304


>gi|413934035|gb|AFW68586.1| hypothetical protein ZEAMMB73_127077 [Zea mays]
          Length = 800

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 124/412 (30%), Positives = 184/412 (44%), Gaps = 65/412 (15%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTI-VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLC 71
           FGC P  F YN ++  L  +G  + +AL L+  M          C PN  TY  +I GLC
Sbjct: 169 FGCRPTTFVYNAVLRVLVASGGAVPLALALYNRMVAAG------CLPNRATYNVLIHGLC 222

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           K G    A +LF +M    I PNV T+  L+   C A    EA+ L   M D+G  P+ V
Sbjct: 223 KRGTPVDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEV 282

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFV-----YNTLMDGFCLTGRVNRAEE 186
           ++N  ++ LCK G++DEA   LE +   G     FV     Y+ L+DG  L GR     +
Sbjct: 283 TYNAFLSGLCKAGRVDEAIERLEALRHTGT----FVLGLKGYSCLIDGLFLAGRYEEGFQ 338

Query: 187 LFVS-MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
            ++  +E      ++  Y+I+I G  +      A + + EM  KG  PD   YNTL   L
Sbjct: 339 CYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKAL 398

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
            +   ++ A  L  EM R+ V  D   Y T I GLCK   + EA+++F  +  +     +
Sbjct: 399 CDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSV 458

Query: 306 RAYNCLIDGL------------------------------------------------CK 317
             YN LIDGL                                                C+
Sbjct: 459 MTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQ 518

Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           SG++  A++L R +    ++ DVVTYN +++ LC    +D A  LF +++ K
Sbjct: 519 SGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVK 570



 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 165/357 (46%), Gaps = 8/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P    +  LI      G    A+  F  M    GEFG  C+P T  Y  ++  L   
Sbjct: 134 GLQPPTAAFEALIFAHASAGRHHEAVEAFSRM---EGEFG--CRPTTFVYNAVLRVLVAS 188

Query: 74  G-FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G  V  A  L+ +M      PN  TYN LIHG C      +A  LF EM+ +G+ PNV +
Sbjct: 189 GGAVPLALALYNRMVAAGCLPNRATYNVLIHGLCKRGTPVDALKLFDEMISRGITPNVKT 248

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
             ++++ +C  G++ EA  LL  M   G  P+   YN  + G C  GRV+ A E   ++ 
Sbjct: 249 HTILLSSMCNAGQLKEAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALR 308

Query: 193 SMGC-KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQ 250
             G     +  YS LI+G       E     Y E+L +  + PD+V+Y  +  G  E  +
Sbjct: 309 HTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGR 368

Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
              AF  FDEM+  G   DT+ Y T +  LC  G +  A  L   +      LDI  Y  
Sbjct: 369 TNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTT 428

Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
           +I GLCK   +  A ++F  +        V+TYN++I  L    ++++AR LF  ME
Sbjct: 429 MIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKME 485



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 185/381 (48%), Gaps = 21/381 (5%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           ++A  LF ++   G  PNV T+  L++ +C  G    A NL   M +        C P+ 
Sbjct: 228 VDALKLFDEMISRGITPNVKTHTILLSSMCNAGQLKEAENLLHSMEDKG------CPPDE 281

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           VTY   + GLCK G VD+A E    ++        +  Y+ LI G   A  + E    ++
Sbjct: 282 VTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYM 341

Query: 120 EMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
           E+++Q  V P++V + +++    + G+ ++A    + M + G  P+ F YNTL+   C  
Sbjct: 342 EVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKGFTPDTFCYNTLLKALCDA 401

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++ A  L   M       ++ +Y+ +I G CK + ++ A+ ++  M+  G  P V+ Y
Sbjct: 402 GDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTY 461

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQ---------RHGVAA----DTWAYRTFIDGLCKNGY 285
           N L  GL+  H++E A  LF +M+         R  + A    D+   +  ++ +C++G 
Sbjct: 462 NVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQ 521

Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
           +++A +L R +       D+  YN L++GLCK   L  A  LFR L       D +TY  
Sbjct: 522 VLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGT 581

Query: 346 MIHALCADGKMDKARDLFLDM 366
           +I +L    + + A  LF D+
Sbjct: 582 LIDSLLRAHRYNDALTLFQDI 602



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 170/377 (45%), Gaps = 45/377 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN-------------- 47
           EA  L   +   GC P+  TYN  ++GLC+ G    A+   E + +              
Sbjct: 264 EAENLLHSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRHTGTFVLGLKGYSCL 323

Query: 48  -------GNGEFGVVC----------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDEN 90
                  G  E G  C           P+ V YT +I G  + G  + A   F +MK++ 
Sbjct: 324 IDGLFLAGRYEEGFQCYMEVLEQADVSPDIVLYTIMIRGCAEAGRTNDAFAFFDEMKEKG 383

Query: 91  INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEAS 150
             P+   YN+L+   C A D + A+ L  EM+   V  ++ ++  ++  LCK   +DEA 
Sbjct: 384 FTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNNVVLDIHTYTTMIIGLCKEQLVDEAM 443

Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME-----------SMGCKHN 199
           ++ + M+++G  P+   YN L+DG     R+  A  LF  ME           ++G    
Sbjct: 444 QVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNPSLFLRLTLGANQV 503

Query: 200 VFSYSI--LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
             S ++  L+   C++ ++  A  L   ++  G+ PDVV YNTL  GL ++  ++ A +L
Sbjct: 504 RDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTYNTLLNGLCKVRNLDGALRL 563

Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
           F E+Q  G   D   Y T ID L +     +A+ LF+ +        +  YN ++  LC+
Sbjct: 564 FRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGGTPSMPIYNSMMRSLCR 623

Query: 318 SGRLKIAWEL-FRSLPR 333
             +L  A  L F  LPR
Sbjct: 624 MQKLSQAINLWFDHLPR 640



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 169/416 (40%), Gaps = 98/416 (23%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A F +++  G  P+ F YNTL+  LC  G    A +L  EM   N    VV   +  
Sbjct: 371 DAFAFFDEMKEKGFTPDTFCYNTLLKALCDAGDLDGARSLMSEMVRNN----VVL--DIH 424

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYTT+I GLCKE  VD+A ++F  M +   +P+V+TYN LI G   A+   EA+ LF +M
Sbjct: 425 TYTTMIIGLCKEQLVDEAMQVFDGMVEVGCHPSVMTYNVLIDGLYRAHRLEEARMLFYKM 484

Query: 122 ------------------------------------------------MDQGVQPNVVSF 133
                                                           +D GV P+VV++
Sbjct: 485 EVGNNPSLFLRLTLGANQVRDSETLQKLVESMCQSGQVLKAYKLLRGIIDSGVVPDVVTY 544

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N ++N LCK   +D A RL   +   G   +   Y TL+D      R N A  LF  +  
Sbjct: 545 NTLLNGLCKVRNLDGALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILH 604

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVVI------------- 237
            G   ++  Y+ ++   C+ +++  A++L+ + L +    +  D VI             
Sbjct: 605 SGGTPSMPIYNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLH 664

Query: 238 --------------------YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
                               Y    IGL +  ++E A K+F  ++  G+           
Sbjct: 665 EAVRELIKIDQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLS 724

Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAY--NCLIDGLCKSGRLK----IAWEL 327
             LC  G +  AV++   L  LK    +R Y  N L+  LC   R K    +AW +
Sbjct: 725 KYLCLEGNLGAAVDVM--LYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQALAWRM 778



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 48/229 (20%), Positives = 83/229 (36%), Gaps = 42/229 (18%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  LF +L+V G   +  TY TLI+ L R      AL LF+++ +  G       P+   
Sbjct: 560 ALRLFRELQVKGFPLDEITYGTLIDSLLRAHRYNDALTLFQDILHSGG------TPSMPI 613

Query: 63  YTTIIDGLCK------------------------------------EGFVDKAKELFLKM 86
           Y +++  LC+                                    EG + +A    +K+
Sbjct: 614 YNSMMRSLCRMQKLSQAINLWFDHLPRKYNLLAQDEVISSARKKFEEGCLHEAVRELIKI 673

Query: 87  KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
             E  + N   Y   + G   A    +A  +F  + + G+         +   LC  G +
Sbjct: 674 DQEYGSVNSCPYTIWLIGLIQAGRIEDALKIFHILEESGIDITPACCVHLSKYLCLEGNL 733

Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
             A  ++   ++ G     +V N L+   C+  R   A+ L   M  +G
Sbjct: 734 GAAVDVMLYTLKKGFTMRRYVGNRLLCSLCIHHRRKDAQALAWRMHLVG 782


>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
 gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
           Japonica Group]
 gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
          Length = 551

 Score =  184 bits (468), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 186/371 (50%), Gaps = 8/371 (2%)

Query: 1   MEAAALFMKLRVFGCEPNV--FTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
           ++ AA  +K     C  +V   + + +++G C++G    A  L +EM       GV  K 
Sbjct: 123 LDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMP----RHGV--KV 176

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N + Y +++D   +E   D+  E+   M++E I P V TY  L+ G   A D  + + +F
Sbjct: 177 NALCYNSLLDAYTREKDDDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 236

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            EM  + +  +V  ++ ++N  C+ G +  AS + +  +  G+ PN   Y  L++GFC  
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 296

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G++  AE L   M+  G   N   ++ +I+GYC+   ++ AL +   M   GI+ DV  Y
Sbjct: 297 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 356

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           NTL  GL   ++++ A  L   M   GV  +  +Y T I   C  G +VEA  LFR +  
Sbjct: 357 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 416

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              E  +  YN ++DG  K G ++ A      + +  L+ D+ +Y  ++H  C +GK+D 
Sbjct: 417 NGAEPSLVTYNVMMDGYIKKGSIREAERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDV 476

Query: 359 ARDLFLDMEAK 369
           A  LF +M+ +
Sbjct: 477 ALRLFEEMKQR 487



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 174/344 (50%), Gaps = 6/344 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G EP V TY  L++GL           +FEEM + N         +   Y+++I+  C+ 
Sbjct: 208 GIEPTVGTYTILVDGLSAARDITKVEAVFEEMKSKN------LSGDVYFYSSVINAYCRA 261

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G V +A E+F +     I PN  TY +LI+GFC       A+ L  +M  +GV  N + F
Sbjct: 262 GNVRRASEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVF 321

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N +++  C+   +D+A  +  +M ++G+  + + YNTL  G     R++ A+ L   M  
Sbjct: 322 NTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIE 381

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + N  SY+ LI+ +C   ++  A  L+ EM   G +P +V YN +  G  +   +  
Sbjct: 382 KGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIRE 441

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A +  +EM++ G+  D ++Y   + G C NG +  A+ LF  ++    + ++ AY  LI 
Sbjct: 442 AERFKNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALIS 501

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
           GL K GR + A++L+ ++    L  D   Y+ ++ +L  D K +
Sbjct: 502 GLAKEGRSEEAFQLYDNMLGDGLTPDDALYSALVGSLHTDKKQN 545



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 73/151 (48%), Gaps = 6/151 (3%)

Query: 1   MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
           +EA  LF ++   G EP++ TYN +++G  + G    A     EM     + G+V  P+ 
Sbjct: 405 VEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME----KKGLV--PDI 458

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            +Y  ++ G C  G VD A  LF +MK     PN+V Y +LI G        EA  L+  
Sbjct: 459 YSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSEEAFQLYDN 518

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
           M+  G+ P+   ++ ++  L  + K +   R
Sbjct: 519 MLGDGLTPDDALYSALVGSLHTDKKQNVKPR 549


>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 662

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 187/356 (52%), Gaps = 9/356 (2%)

Query: 6   LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
           ++ K++  G EP ++TYN L+NGL        A  +FE M +G        KP+ VTY T
Sbjct: 209 VWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGR------IKPDVVTYNT 262

Query: 66  IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNEAKCLFIEMMDQ 124
           +I G CK G   KA E    M+ + +  + +TY ++I   CYA+ D++    L+ EM ++
Sbjct: 263 MIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQA-CYADSDFSSCVALYQEMDEK 321

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+Q    +F++++  LCK GK++E   + E MI+ G +PN  +Y  L+DG+  TG V  A
Sbjct: 322 GLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDA 381

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             L   M   G   +V +YS+++NG CKN  +E A+  +      G+  + + Y++L  G
Sbjct: 382 IRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDG 441

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-YEL 303
           L +  +V+ A +LF+EM   G   D++ Y   ID   K+G + EA+ LF+ +   +  + 
Sbjct: 442 LGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQ 501

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            +  Y  LI G+ K  R + A +L+  +    +         +   LC  GK+ +A
Sbjct: 502 TVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARA 557



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 112/327 (34%), Positives = 163/327 (49%), Gaps = 8/327 (2%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
           AL+ ++   G +     ++ +I GLC+ G       +FE M           KPN   YT
Sbjct: 313 ALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGS------KPNVAIYT 366

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
            +IDG  K G V+ A  L  +M DE  NP+VVTY+ +++G C      EA   F      
Sbjct: 367 VLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFN 426

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+  N + ++ +++ L K G++DEA RL E M + G   +++ YN L+D F   G+V+ A
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEA 486

Query: 185 EELFVSMESM-GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
             LF  ME   GC   V++Y+ILI+G  K    E AL L+  M+ KGI P       L  
Sbjct: 487 LALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALST 546

Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
           GL    +V RA K+ DE+   GV  D  A    I+ LCK G I EA +L   +     E+
Sbjct: 547 GLCLSGKVARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREV 605

Query: 304 DIRAYNCLIDGLCKSGRLKIAWELFRS 330
             R    +I+ L K G+  +A +L  S
Sbjct: 606 PGRIRTVMINALRKVGKADLAMKLMHS 632



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 160/318 (50%), Gaps = 6/318 (1%)

Query: 51  EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAND 110
           EF +   P      ++I    K G V++   ++ KMK+  I P + TYN L++G   A  
Sbjct: 182 EFPMTVSPGN----SLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMF 237

Query: 111 WNEAKCLFIEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
            + A+ +F E+M+ G ++P+VV++N ++   CK G+  +A   L +M   G+  +   Y 
Sbjct: 238 VDSAERVF-EVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYM 296

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
           T++         +    L+  M+  G +    ++S++I G CK  ++    +++  M+ K
Sbjct: 297 TMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRK 356

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G KP+V IY  L  G  +   VE A +L   M   G   D   Y   ++GLCKNG + EA
Sbjct: 357 GSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEA 416

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           ++ F+T R     ++   Y+ LIDGL K+GR+  A  LF  +       D   YN +I A
Sbjct: 417 MDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDA 476

Query: 350 LCADGKMDKARDLFLDME 367
               GK+D+A  LF  ME
Sbjct: 477 FTKHGKVDEALALFKRME 494



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 155/311 (49%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   Y +++D L     VD+ + +  +++       V   NSLI  F       E   ++
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVW 210

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M + G++P + ++N +MN L     +D A R+ E+M    ++P+   YNT++ G+C  
Sbjct: 211 RKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKA 270

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G+  +A E    ME+ G + +  +Y  +I     + +    ++LY EM  KG++     +
Sbjct: 271 GQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAF 330

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
           + +  GL +  ++   + +F+ M R G   +   Y   IDG  K G + +A+ L   +  
Sbjct: 331 SLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMID 390

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
             +  D+  Y+ +++GLCK+GR++ A + F++     L  + + Y+ +I  L   G++D+
Sbjct: 391 EGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDE 450

Query: 359 ARDLFLDMEAK 369
           A  LF +M  K
Sbjct: 451 AERLFEEMSEK 461



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 145/314 (46%), Gaps = 3/314 (0%)

Query: 51  EFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELF-LKMKDENINPNVVTYNSLIHGFCYAN 109
           +F +   PN V++    D + ++   D A   F    K +    N+  Y SL+     A 
Sbjct: 109 KFLIKLSPNFVSFVLKSDEIREKP--DIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAK 166

Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
           D +  + +  E+        V   N ++    K G ++E   +   M + G+ P  + YN
Sbjct: 167 DVDRIRFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYN 226

Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
            LM+G      V+ AE +F  MES   K +V +Y+ +I GYCK  + + AL     M +K
Sbjct: 227 FLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETK 286

Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
           G++ D + Y T+    +          L+ EM   G+     A+   I GLCK G + E 
Sbjct: 287 GLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEG 346

Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
             +F  +     + ++  Y  LIDG  K+G ++ A  L   +       DVVTY+++++ 
Sbjct: 347 YAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNG 406

Query: 350 LCADGKMDKARDLF 363
           LC +G++++A D F
Sbjct: 407 LCKNGRVEEAMDYF 420



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/257 (28%), Positives = 130/257 (50%), Gaps = 8/257 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  P+V TY+ ++NGLC+ G    A++ F +    NG        N++
Sbjct: 380 DAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYF-QTCRFNG-----LAINSM 433

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+++IDGL K G VD+A+ LF +M ++    +   YN+LI  F      +EA  LF  M
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRM 493

Query: 122 -MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
             ++G    V ++ ++++ + K  + +EA +L ++MI  G+ P A     L  G CL+G+
Sbjct: 494 EEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGK 553

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           V RA ++   +  MG   +  +   +IN  CK   I+ A  L   +  +G +    I   
Sbjct: 554 VARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTV 612

Query: 241 LFIGLFEIHQVERAFKL 257
           +   L ++ + + A KL
Sbjct: 613 MINALRKVGKADLAMKL 629


>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
 gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
          Length = 319

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 147/242 (60%), Gaps = 5/242 (2%)

Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
           + P+ V+FN++++ LCK GK+ EA  +++ MI+ GV PN   Y++LM+G+ L  RV  A 
Sbjct: 6   IMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEAR 65

Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
           ++F +M + GC  +V SY+ILING CK + I+ A  ++ EM  +G+ P+   YNTL  G 
Sbjct: 66  KVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF 125

Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
           +     ++  +LF +M   G + D   Y  F+ GL K GY+ +A+ELFR ++      D+
Sbjct: 126 W-----KQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDL 180

Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
             YN LID +CKSG+L+ A ELF  L    L+ DV ++  +I  LC +G +D+A   F  
Sbjct: 181 VIYNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQ 240

Query: 366 ME 367
           ME
Sbjct: 241 ME 242



 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 167/303 (55%), Gaps = 5/303 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+ VT+  ++D LCK+G + +A+ +   M ++ + PN VTY+SL++G+   N   EA+ +
Sbjct: 8   PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
           F  M+ +G  P+V+S+N+++N  CK  ++DEA ++ + M   G+ PN   YNTL+ GF  
Sbjct: 68  FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF-- 125

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
                +  +LF  M + GC  ++ +YSI ++G  K   ++ AL L+ EM +  + PD+VI
Sbjct: 126 ---WKQKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L   + +  ++E A +LF ++   G+  D  ++ + I GLC+ G + EA + FR + 
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQME 242

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D  +YN ++ G  ++     A +LF+ +      AD +T  +    L  D  + 
Sbjct: 243 RDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKDDNLG 302

Query: 358 KAR 360
             R
Sbjct: 303 LKR 305



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 142/282 (50%), Gaps = 11/282 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA  +   +   G EPN  TY++L+NG         A  +F  M          C P+ +
Sbjct: 28  EAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMITRG------CIPDVL 81

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I+G CK   +D+AK++F +M    + PN  TYN+L+ GF     W +   LF +M
Sbjct: 82  SYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGF-----WKQKIQLFKDM 136

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             QG  P++V++++ ++ L K G +D+A  L   M    + P+  +YN L+D  C +G++
Sbjct: 137 HAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCKSGKL 196

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A ELF+ +   G   +V S++ +I+G C+   ++ A   + +M   G  PD   YN +
Sbjct: 197 EDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVI 256

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
             G  + +   RA +LF EM   G +AD        D L K+
Sbjct: 257 VRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSKD 298



 Score =  134 bits (336), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 70/214 (32%), Positives = 116/214 (54%), Gaps = 5/214 (2%)

Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
           M    + P+A  +N L+D  C  G+++ A+ +  +M   G + N  +YS L+NGY     
Sbjct: 1   MTSFIIMPDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNR 60

Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
           +  A  +++ M+++G  PDV+ YN L  G  +  +++ A ++FDEM   G+  +T  Y T
Sbjct: 61  VFEARKVFNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNT 120

Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
            + G  K     + ++LF+ +       D+  Y+  + GL K G L  A ELFR +    
Sbjct: 121 LLGGFWK-----QKIQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNY 175

Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           L  D+V YNI+I A+C  GK++ AR+LFL +  K
Sbjct: 176 LNPDLVIYNILIDAMCKSGKLEDARELFLKLHVK 209


>gi|413934354|gb|AFW68905.1| hypothetical protein ZEAMMB73_510949 [Zea mays]
          Length = 845

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/391 (30%), Positives = 190/391 (48%), Gaps = 41/391 (10%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F  +   GCEP V TYN L++ LC  G    A  LF+EMA       V  + NT+
Sbjct: 271 DAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQ------VGIQVNTI 324

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN-------------SLIHG---- 104
           T+  +IDG  K G +D+A   + +M+   + P+  T+N              L+H     
Sbjct: 325 TFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMF 384

Query: 105 ---------------FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
                           C+ +  ++A  L +  ++QGV   V  FN ++    K G  +EA
Sbjct: 385 SSHMSADGLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEA 444

Query: 150 SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG-CKHNVFSYSILIN 208
           S L  +M ++G+ P++  +N L+ G C  GR++ A+ L   M S G C     S++I ++
Sbjct: 445 SELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLST--SFTICLD 502

Query: 209 GYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
            Y ++    GAL  + +M + G++ D + ++    GL  +  V  A++ F EM   G+  
Sbjct: 503 AYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVP 562

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF 328
           +   Y + I  LCK G + EA++L + +R      DI   N LIDGLC+ G+LK+   L 
Sbjct: 563 NNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKLKMVDNLL 622

Query: 329 RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             +    L  D VTYN +I+A C    M+ A
Sbjct: 623 LDMCSNGLTPDTVTYNTIINAYCRAQDMNSA 653



 Score =  154 bits (388), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/345 (28%), Positives = 170/345 (49%), Gaps = 8/345 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA+ L+  +   G  P+  T+N LI GLC  G    A  L E M +        C   + 
Sbjct: 443 EASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKG-----YCL--ST 495

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           ++T  +D   ++G    A + +  M +  +  + + +++ I+G C  +  NEA   F EM
Sbjct: 496 SFTICLDAYFRDGNAVGALKCWDDMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEM 555

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             +G+ PN +++N I++ LCK G M EA +L++ M Q G+ P+ +  N L+DG C  G++
Sbjct: 556 TSRGIVPNNITYNSIISALCKAGNMTEALKLVQNMRQSGLVPDIYTSNILIDGLCREGKL 615

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
              + L + M S G   +  +Y+ +IN YC+ +++  A++  ++ML  G +PD+  YN  
Sbjct: 616 KMVDNLLLDMCSNGLTPDTVTYNTIINAYCRAQDMNSAMNFMNKMLVAGCEPDIFTYNIW 675

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
              L   H + +A KL DE+     + ++  Y T +DG+C +  +  A+ L   L  + +
Sbjct: 676 MHSLCRNHMLNQAGKLLDELVAVDCSPNSVTYNTLMDGICSD-VLDRAMILTGRLIKMAF 734

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
           + +    N  +   CK G    A      L     + D  T NI+
Sbjct: 735 KPNTITLNVFLSHFCKQGFGNRALMWAEKLREDSFVFDGATRNII 779



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 186/433 (42%), Gaps = 74/433 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +  ++R  G  P++   + L+  L R+G    A N+FEEM A G        +P+ 
Sbjct: 166 EALDVLARVRRSGNTPSLSALSALLRLLFRSGEVRAAWNVFEEMTAEGP-------RPSL 218

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
            T+  ++ G C  G V  A  L   M    I P+V +YN LI G C      +A  +F  
Sbjct: 219 ATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVCSYNILIKGHCVFGWSRDAFKMFEG 278

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M   G +P VV++N++++ LC  G+M EA RL + M Q+G++ N   +N L+DG+  +G+
Sbjct: 279 MHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEMAQVGIQVNTITFNVLIDGYAKSGQ 338

Query: 181 VNRAEELFVSMESMGC-------------------------KHNVFSYSILING------ 209
           +++A   +  M++ G                           H++FS  +  +G      
Sbjct: 339 MDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYAAQLVHDHDMFSSHMSADGLDMLVC 398

Query: 210 -YCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAA 268
             C +  ++ A  L    + +G+   V  +N L     +    E A +L+  M + G+A 
Sbjct: 399 RLCWDHRLDDAWELLLGAIEQGVPLRVTGFNALIAAYSKEGLHEEASELYRIMNKLGLAP 458

Query: 269 DTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY--------------------------- 301
            +  +   I GLC  G + EA  L   +    Y                           
Sbjct: 459 SSSTFNYLIMGLCNQGRLDEAQLLLEHMVSKGYCLSTSFTICLDAYFRDGNAVGALKCWD 518

Query: 302 -------ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
                  + D  A++  I+GLC+   +  A++ F  +    ++ + +TYN +I ALC  G
Sbjct: 519 DMGNIGLQTDFIAFSAYINGLCRLDCVNEAYQAFAEMTSRGIVPNNITYNSIISALCKAG 578

Query: 355 KMDKARDLFLDME 367
            M +A  L  +M 
Sbjct: 579 NMTEALKLVQNMR 591



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 3/298 (1%)

Query: 72  KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
           + G V  A  +F +M  E   P++ T+N+++ GFC+      A  L   M   G+ P+V 
Sbjct: 195 RSGEVRAAWNVFEEMTAEGPRPSLATFNAMLLGFCHRGMVRVASGLLGIMGKSGIAPDVC 254

Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
           S+N+++   C  G   +A ++ E M + G  P    YN L+D  C  GR+  A  LF  M
Sbjct: 255 SYNILIKGHCVFGWSRDAFKMFEGMHRSGCEPTVVTYNILVDVLCHEGRMPEARRLFDEM 314

Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
             +G + N  ++++LI+GY K+ +++ A + Y EM ++G+ PD   +N +     +    
Sbjct: 315 AQVGIQVNTITFNVLIDGYAKSGQMDQASAAYREMQARGLVPDSCTFNIIAARAHKFGYA 374

Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
            +     D    H ++AD       +  LC +  + +A EL          L +  +N L
Sbjct: 375 AQLVHDHDMFSSH-MSAD--GLDMLVCRLCWDHRLDDAWELLLGAIEQGVPLRVTGFNAL 431

Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           I    K G  + A EL+R + +  L     T+N +I  LC  G++D+A+ L   M +K
Sbjct: 432 IAAYSKEGLHEEASELYRIMNKLGLAPSSSTFNYLIMGLCNQGRLDEAQLLLEHMVSK 489


>gi|357140210|ref|XP_003571663.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Brachypodium distachyon]
          Length = 841

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 118/396 (29%), Positives = 191/396 (48%), Gaps = 47/396 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++R  GC+P V TYN L+N LC  G+ + A  LF+EM        V  + NT+
Sbjct: 263 DAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVK------VGIEANTI 316

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYN-------------SLIHG---- 104
           T+  ++DG  K G +D+A     +MK   + P+  T+N              L HG    
Sbjct: 317 TFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQEL 376

Query: 105 -------------------FCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGK 145
                               C+    ++A  L    ++QGV  +V  FN ++    K G 
Sbjct: 377 HEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGF 436

Query: 146 MDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF--SY 203
            ++A  +  +M +IG+ P++  +N L+ G C  GR++ A+ L   +E M CK      S+
Sbjct: 437 DEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLL---LEHMICKGYCVGTSF 493

Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
           +I ++ Y ++  +EGAL  + +M+  G++PD + ++    GL  +  V  A++ F EM  
Sbjct: 494 TIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTG 553

Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
            G   +   Y + I   C+ GY+ EA++L + +R      D+   N LIDG CK GRL +
Sbjct: 554 RGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDM 613

Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
             + F  +    L  DVVTYN +I+A C    M  A
Sbjct: 614 MNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSA 649



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 170/347 (48%), Gaps = 12/347 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  ++  +   G  P+  T+N LI GLC  G    A  L E M         +CK   V
Sbjct: 439 QALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHM---------ICKGYCV 489

Query: 62  --TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
             ++T  +D   + G V+ A + +  M    + P+ + +++ I G C  +  NEA   F+
Sbjct: 490 GTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFV 549

Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
           EM  +G  PN +++N +++  C+ G + EA +L + M Q G+ P+ F  N L+DGFC  G
Sbjct: 550 EMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEG 609

Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
           R++   + F+ M + G   +V +Y+ +IN YC  +++  A+   ++ML+ G +PD+  YN
Sbjct: 610 RLDMMNKRFLDMYNSGLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYN 669

Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
                L   H + RA K+ DE+   G   ++  Y T +DG+C +  +  A+ L   L  +
Sbjct: 670 IWMHSLCNNHLLNRAVKMLDELVAMGCMPNSVTYNTLMDGICSD-VLDRAMILTGKLIKM 728

Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
            ++ +    N      CK G  K A      L    +  D  T NI+
Sbjct: 729 AFQPNTVTVNVFFSHFCKQGFGKRALVWAEKLKEDSVAFDDATMNIL 775



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 184/435 (42%), Gaps = 76/435 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
            A  +F+++   G  P++  +N +I G C  G   + L L   M      F V+  P+  
Sbjct: 193 PAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGLLGVM----WRFNVI--PDAC 246

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y  +I G    G    A +L  +M++    P VVTYN L++  C+  +  +A+ LF EM
Sbjct: 247 SYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEM 306

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG------- 174
           +  G++ N ++FNV+++   K G+MDEA      M   G+ P+   +N L  G       
Sbjct: 307 VKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKA 366

Query: 175 -----------------------------FCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
                                         C  GR++ A +L  S    G   +V  ++ 
Sbjct: 367 VQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNA 426

Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL-------------------- 245
           L+  Y K    E AL +YS M   G+ P    +N L +GL                    
Sbjct: 427 LVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKG 486

Query: 246 --------------FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
                         F    VE A K +D+M + GV  D  A+  +I GLC+  ++ EA +
Sbjct: 487 YCVGTSFTIYMDSYFRSGNVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQ 546

Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
            F  +    +  +   YN LI   C+ G +  A +L + + +  LI DV T NI+I   C
Sbjct: 547 AFVEMTGRGFVPNNITYNSLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFC 606

Query: 352 ADGKMDKARDLFLDM 366
            +G++D     FLDM
Sbjct: 607 KEGRLDMMNKRFLDM 621



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 149/334 (44%), Gaps = 13/334 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
           EA  +   +R  G  P++     L+  L R G    A  +F EM A G        +P+ 
Sbjct: 158 EALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGP-------RPSL 210

Query: 61  VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
             +  +I G C  G V     L   M   N+ P+  +YN LI G+       +A  L  E
Sbjct: 211 AIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDE 270

Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
           M + G QP VV++N+++N LC +G M +A RL + M+++G+  N   +N L+DG+   GR
Sbjct: 271 MRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGR 330

Query: 181 VNRAEELFVSMESMGCKHNVFSYSILING---YCKNKEIEGALSLYSEMLSKGIKPDVVI 237
           ++ A      M++ G   +  +++IL  G   + K  ++        EM    I  D V 
Sbjct: 331 MDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSV- 389

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
            + +   L    +++ A+KL       GV      +   +    K G+  +A+E++  + 
Sbjct: 390 -DMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMN 448

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
            +        +N LI GLC  GRL  A  L   +
Sbjct: 449 KIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHM 482



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 174/395 (44%), Gaps = 46/395 (11%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE----FG---- 53
           EA A   +++  G  P+  T+N L  G  + G  +       ++A+G  E    FG    
Sbjct: 333 EAYAACREMKARGLVPDCCTFNILSAGAYKFGKAV-------QLAHGQQELHEMFGSRIS 385

Query: 54  ------VVCK----------------------PNTVT-YTTIIDGLCKEGFVDKAKELFL 84
                 VVC+                      P +V  +  ++    KEGF ++A E++ 
Sbjct: 386 ADSVDMVVCRLCWDGRLDDAWKLVCSAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYS 445

Query: 85  KMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG 144
            M    + P+  T+N LI G C     ++A+ L   M+ +G      SF + M+   ++G
Sbjct: 446 VMNKIGLVPSSPTFNYLIMGLCNQGRLDDAQLLLEHMICKGYCVGT-SFTIYMDSYFRSG 504

Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
            ++ A +  + M+++GV+P+   ++  + G C    VN A + FV M   G   N  +Y+
Sbjct: 505 NVEGALKCWDDMVKVGVQPDFIAFSAYISGLCRLDHVNEAYQAFVEMTGRGFVPNNITYN 564

Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
            LI+ +C+   +  AL L  +M   G+ PDV   N L  G  +  +++   K F +M   
Sbjct: 565 SLISAFCRVGYVSEALKLEKKMRQSGLIPDVFTSNILIDGFCKEGRLDMMNKRFLDMYNS 624

Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
           G+  D   Y T I+  C    +  A+     +     E DI  YN  +  LC +  L  A
Sbjct: 625 GLTPDVVTYNTIINAYCGAQDMSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRA 684

Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++   L     + + VTYN ++  +C+D  +D+A
Sbjct: 685 VKMLDELVAMGCMPNSVTYNTLMDGICSD-VLDRA 718



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/315 (24%), Positives = 150/315 (47%), Gaps = 5/315 (1%)

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           P+      ++  L + G V  A ++F++M      P++  +N++I GFC+    +    L
Sbjct: 173 PSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLGL 232

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
              M    V P+  S+N+++      G+  +A +LL+ M + G +P    YN L++  C 
Sbjct: 233 LGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLCH 292

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G +  A  LF  M  +G + N  ++++L++GY K   ++ A +   EM ++G+ PD   
Sbjct: 293 DGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCCT 352

Query: 238 YNTLFIGLFEIH---QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
           +N L  G ++     Q+    +   EM    ++AD+      +  LC +G + +A +L  
Sbjct: 353 FNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADS--VDMVVCRLCWDGRLDDAWKLVC 410

Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
           +       + +  +N L+    K G  + A E++  + +  L+    T+N +I  LC  G
Sbjct: 411 SAIEQGVPVSVAGFNALVAAYSKEGFDEQALEVYSVMNKIGLVPSSPTFNYLIMGLCNQG 470

Query: 355 KMDKARDLFLDMEAK 369
           ++D A+ L   M  K
Sbjct: 471 RLDDAQLLLEHMICK 485



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 3/274 (1%)

Query: 92  NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
            P++    +L+     A +   A  +F+EM  +G +P++  FN ++   C  G +     
Sbjct: 172 TPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNAMILGFCHRGLVHIGLG 231

Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
           LL +M +  V P+A  YN L+ G+ + G+   A +L   M   GC+  V +Y+IL+N  C
Sbjct: 232 LLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESGCQPTVVTYNILVNVLC 291

Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
            +  +  A  L+ EM+  GI+ + + +N L  G  +  +++ A+    EM+  G+  D  
Sbjct: 292 HDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAYAACREMKARGLVPDCC 351

Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLR-ILKYELDIRAYNCLIDGLCKSGRLKIAWELF-R 329
            +     G  K G  V+     + L  +    +   + + ++  LC  GRL  AW+L   
Sbjct: 352 TFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISADSVDMVVCRLCWDGRLDDAWKLVCS 411

Query: 330 SLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
           ++ +GV ++ V  +N ++ A   +G  ++A +++
Sbjct: 412 AIEQGVPVS-VAGFNALVAAYSKEGFDEQALEVY 444



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/264 (28%), Positives = 119/264 (45%), Gaps = 5/264 (1%)

Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
           +H F  A   +EA  +   +   G  P++ +   ++  L + G++  A ++   M   G 
Sbjct: 147 LHAFLAAGMASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGP 206

Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
           RP+  ++N ++ GFC  G V+    L   M       +  SY+ILI GY    +   A  
Sbjct: 207 RPSLAIFNAMILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQ 266

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
           L  EM   G +P VV YN L   L     +  A +LFDEM + G+ A+T  +   +DG  
Sbjct: 267 LLDEMRESGCQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYA 326

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR---LKIAWELFRSLPRGVLIA 338
           K G + EA    R ++      D   +N L  G  K G+   L    +    +    + A
Sbjct: 327 KAGRMDEAYAACREMKARGLVPDCCTFNILSAGAYKFGKAVQLAHGQQELHEMFGSRISA 386

Query: 339 DVVTYNIMIHALCADGKMDKARDL 362
           D V  ++++  LC DG++D A  L
Sbjct: 387 DSV--DMVVCRLCWDGRLDDAWKL 408



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 3/189 (1%)

Query: 184 AEELFVSMESMGCKHNVFSYSI---LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
           A E  V +  + C  N  S S    L+    +  E+  A  ++ EM ++G +P + I+N 
Sbjct: 156 ASEALVVLAHIRCGGNTPSLSAIAALLRLLFRAGEVRPAWKVFVEMTARGPRPSLAIFNA 215

Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
           + +G      V     L   M R  V  D  +Y   I G    G   +A +L   +R   
Sbjct: 216 MILGFCHRGLVHIGLGLLGVMWRFNVIPDACSYNILIKGYSVFGQAGDAFQLLDEMRESG 275

Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
            +  +  YN L++ LC  G +  A  LF  + +  + A+ +T+N+++      G+MD+A 
Sbjct: 276 CQPTVVTYNILVNVLCHDGNMVDARRLFDEMVKVGIEANTITFNVLVDGYAKAGRMDEAY 335

Query: 361 DLFLDMEAK 369
               +M+A+
Sbjct: 336 AACREMKAR 344



 Score = 54.7 bits (130), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 47/163 (28%)

Query: 1   MEAAALFM-KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           M +A +FM K+   GCEP++FTYN  ++ LC       A+ + +E+        + C PN
Sbjct: 646 MSSAMIFMNKMLADGCEPDIFTYNIWMHSLCNNHLLNRAVKMLDELV------AMGCMPN 699

Query: 60  TVTYTTIIDGLC----------------------------------KEGFVDKAKELFLK 85
           +VTY T++DG+C                                  K+GF  +A     K
Sbjct: 700 SVTYNTLMDGICSDVLDRAMILTGKLIKMAFQPNTVTVNVFFSHFCKQGFGKRALVWAEK 759

Query: 86  MKDENINPNVVTYNSLIHGFCYANDWNEA------KCLFIEMM 122
           +K++++  +  T N L   +    D ++A      +CLF+E +
Sbjct: 760 LKEDSVAFDDATMNILDWAYKEMEDDSQASNADIDRCLFLEFL 802


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  184 bits (468), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 190/370 (51%), Gaps = 15/370 (4%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNL---FEEMANGNGEFGVVCK 57
           +A  +F ++  +FGC+P + +YN+L+N L  +     A +    FE M            
Sbjct: 96  QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG---------LS 146

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN  TY  +I   C++   DKAKEL   M ++  +P+V +Y +LI+        ++A  L
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFC 176
           F EM ++GV P+V  +N++++   K G +  AS + E +++   V PN   YN +++G C
Sbjct: 207 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 266

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G+ + + E++  M+      ++++YS LI+G C +  ++GA  +Y EM   G+ PDVV
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +YNT+  G     ++E   +L+  M++ G      +Y   I GL +N  + EA+ ++  L
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELL 385

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D   Y  L+ GLCK+G L  A  +      G    D   Y+ MI+ LC +G++
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 357 DKARDLFLDM 366
           D+   +   M
Sbjct: 446 DEVAGVLDQM 455



 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 188/355 (52%), Gaps = 11/355 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           PN+ +YN +INGLC+ G    +  ++  M  N  G+       +  TY+T+I GLC  G 
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-------DLYTYSTLIHGLCGSGN 305

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  ++ +M +  ++P+VV YN++++G+  A    E   L+  M  +G +  VVS+N+
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  L +N K+DEA  + EL+ +     ++  Y  L+ G C  G +N+A  +    E+  
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              + F+YS +ING C+   ++    +  +M   G KP+  + N +  G     ++E A 
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           + F  M   G       Y T I+GL K     EA  L + +    ++ ++  Y+ L++GL
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 316 CKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C+  +L +A  L+ ++L +G    DV  +NI+IH LC+ GK++ A  L+ +M+ +
Sbjct: 545 CQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598



 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 191/357 (53%), Gaps = 8/357 (2%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+VF+Y TLIN L + G+   AL LF+EM     E GV   P+   Y  +IDG  K+
Sbjct: 179 GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMP----ERGVT--PDVACYNILIDGFFKK 232

Query: 74  GFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G +  A E++ + +K  ++ PN+ +YN +I+G C    ++E+  ++  M       ++ +
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ +++ LC +G +D A+R+ + M + GV P+  VYNT+++G+   GR+    EL+  ME
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC+  V SY+ILI G  +N +++ A+S++  +  K    D + Y  L  GL +   + 
Sbjct: 353 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A  + +E +      DT+AY + I+GLC+ G + E   +   +     + +    N +I
Sbjct: 412 KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVI 471

Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           +G  ++ +L+ A   F ++        VVTYN +I+ L    +  +A  L  +M  K
Sbjct: 472 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHK 528



 Score =  174 bits (442), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 161/289 (55%), Gaps = 6/289 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +++  L    C  +  TY  L++GLC+ G+   AL++ EE  NG G+       +T 
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL------DTF 430

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+++I+GLC+EG +D+   +  +M      PN    N++I+GF  A+   +A   F  M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P VV++N ++N L K  +  EA  L++ M+  G +PN   Y+ LM+G C   ++
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKL 550

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L+      G K +V  ++I+I+G C + ++E AL LYSEM  +   P++V +NTL
Sbjct: 551 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
             G +++   ERA K++D + ++G   D  +Y   + GLC    I +AV
Sbjct: 611 MEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAV 659



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 181/345 (52%), Gaps = 7/345 (2%)

Query: 24  TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELF 83
           T+I    +      AL++F+ M    G     C+P   +Y ++++ L +    D+A+  F
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFG-----CQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 84  LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN 143
           L  +   ++PN+ TYN LI   C    +++AK L   M +QG  P+V S+  ++N L KN
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS-MESMGCKHNVFS 202
           G M +A +L + M + GV P+   YN L+DGF   G +  A E++   ++      N+ S
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+++ING CK  + + +  ++  M       D+  Y+TL  GL     ++ A +++ EM 
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 317

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
            +GV+ D   Y T ++G  + G I E +EL++ +        + +YN LI GL ++ ++ 
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVD 376

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A  ++  LP     AD +TY +++H LC +G ++KA  +  + E
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 184/357 (51%), Gaps = 7/357 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ ++   G  P+V  YNT++NG  R G     L L++ M          C+   V+
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG------CR-TVVS 361

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I GL +   VD+A  ++  + +++   + +TY  L+HG C     N+A  +  E  
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +     +  +++ ++N LC+ G++DE + +L+ M + G +PN  V N +++GF    ++ 
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE 481

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A   F +M S GC   V +Y+ LING  K +    A +L  EML KG KP+++ Y+ L 
Sbjct: 482 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLM 541

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  +++ A  L+ +    G   D   +   I GLC +G + +A++L+  ++  K  
Sbjct: 542 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV 601

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
            ++  +N L++G  K    + A +++  + +     D+++YNI +  LC+  ++  A
Sbjct: 602 PNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDA 658



 Score =  154 bits (389), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 164/310 (52%), Gaps = 3/310 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEA 114
           CK       T+I    K    D+A ++F +M +     P + +YNSL++    +N W+EA
Sbjct: 74  CKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEA 133

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           +  F+     G+ PN+ ++N+++   C+  + D+A  LL  M + G  P+ F Y TL++ 
Sbjct: 134 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKP 233
               G ++ A +LF  M   G   +V  Y+ILI+G+ K  +I  A  ++  +L    + P
Sbjct: 194 LAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 253

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           ++  YN +  GL +  + + +F+++  M+++    D + Y T I GLC +G +  A  ++
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           + +       D+  YN +++G  ++GR++   EL++ + +      VV+YNI+I  L  +
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFEN 372

Query: 354 GKMDKARDLF 363
            K+D+A  ++
Sbjct: 373 AKVDEAISIW 382



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 72/133 (54%), Gaps = 6/133 (4%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G +P+V  +N +I+GLC +G    AL L+ EM          C PN VT+ T+++G  K 
Sbjct: 564 GFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK------CVPNLVTHNTLMEGFYKV 617

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
              ++A +++  +      P++++YN  + G C  +  ++A     + +D+GV P  +++
Sbjct: 618 RDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITW 677

Query: 134 NVIMNELCKNGKM 146
           N+++  +  NG +
Sbjct: 678 NILVRAVLDNGAL 690


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 179/355 (50%), Gaps = 6/355 (1%)

Query: 16  EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
            PN  TYNT+I G C  G    AL +  EM    G       P+  TY T+I G CK G 
Sbjct: 144 RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGG-----IAPDKYTYATLISGWCKIGR 198

Query: 76  VDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
           ++ A ++F +M  +  + P+ V YN+LI G+C     + A     +M+ +G+   V ++N
Sbjct: 199 MEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYN 258

Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
           ++M+ L  + +  +A  +LE M + G  P+ F YN L++G+C  G   +A E+F  M   
Sbjct: 259 LLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQK 318

Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
           G +    +Y+ LI  + +  +++    L++  + KGI+PDVV+YN L         +ERA
Sbjct: 319 GVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERA 378

Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
           +++  EM++  +  D   Y T + G C  G + EA  L   +     + D+ +YN LI G
Sbjct: 379 YEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISG 438

Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
               G +K A  +   +        ++TYN +I  LC   + D A +L  +M AK
Sbjct: 439 YSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAK 493



 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 178/371 (47%), Gaps = 21/371 (5%)

Query: 3   AAALFM---KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
           A ALF    +LR+  C     T+N ++  LC TG  + AL L  +M           +PN
Sbjct: 100 AFALFADIYRLRLPLC---TTTFNIMLRHLCATGKPVRALELLRQMP----------RPN 146

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLF 118
            VTY T+I G C  G V  A E+  +M++   I P+  TY +LI G+C      +A  +F
Sbjct: 147 AVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVF 206

Query: 119 IEMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
            EM+ +G V P+ V +N ++   C  GK+D A +  E M+Q G+      YN LM    +
Sbjct: 207 DEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFM 266

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
             R + A  +   M+  G   +VF+Y+ILINGYCK    + AL ++ EM  KG++   V 
Sbjct: 267 DARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVT 326

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y +L        QV+   +LF+   + G+  D   Y   I+  C  G +  A E+   + 
Sbjct: 327 YTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEME 386

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
             +   D   YN L+ G C  GRL  A  L   + +  +  D+V+YN +I      G + 
Sbjct: 387 KKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIK 446

Query: 358 KA---RDLFLD 365
            A   RD  +D
Sbjct: 447 DALRVRDEMMD 457



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/340 (31%), Positives = 163/340 (47%), Gaps = 5/340 (1%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+ +TY TLI+G C+ G    A+ +F+EM    GE      P+ V Y  +I G C  
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLT-KGEVA----PSAVMYNALIGGYCDV 232

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
           G +D A +    M    I   V TYN L+H        ++A  +  EM   G  P+V ++
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292

Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
           N+++N  CK G   +A  + E M Q GVR  A  Y +L+  F   G+V   + LF     
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352

Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
            G + +V  Y+ LIN +C   ++E A  + +EM  K I PD + YNTL  G   + +++ 
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           A  L DEM + G+  D  +Y T I G    G I +A+ +   +    +   +  YN LI 
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQ 472

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           GLCK  +   A  L + +    +  D  TY  +I  L  +
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512



 Score =  152 bits (384), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 137/244 (56%), Gaps = 6/244 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A A+  +++  G  P+VFTYN LING C+ G+   AL +FEEM+    + GV  +   V
Sbjct: 272 DAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMS----QKGV--RATAV 325

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TYT++I    ++G V +   LF     + I P+VV YN+LI+  C   D   A  +  EM
Sbjct: 326 TYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEM 385

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
             + + P+ +++N +M   C  G++DEA  L++ M + G++P+   YNTL+ G+ + G +
Sbjct: 386 EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDI 445

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A  +   M   G    + +Y+ LI G CK ++ + A +L  EM++KGI PD   Y +L
Sbjct: 446 KDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISL 505

Query: 242 FIGL 245
             GL
Sbjct: 506 IEGL 509



 Score =  150 bits (380), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/312 (28%), Positives = 157/312 (50%), Gaps = 6/312 (1%)

Query: 60  TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
           T T+  ++  LC  G   +A EL  +M      PN VTYN++I GFC       A  +  
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 120 EMMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCL 177
           EM ++G + P+  ++  +++  CK G+M++A ++ + M+  G V P+A +YN L+ G+C 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G+++ A +    M   G    V +Y++L++    +     A ++  EM   G  PDV  
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT 291

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           YN L  G  +    ++A ++F+EM + GV A    Y + I    + G + E   LF    
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV 351

Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
                 D+  YN LI+  C  G ++ A+E+   + +  +  D +TYN ++   C  G++D
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411

Query: 358 KARDLFLDMEAK 369
           +AR L  +M  +
Sbjct: 412 EARTLIDEMTKR 423



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 8/116 (6%)

Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
           + +L+ +++   V     +    +  L        A  LF  +  L+  L    +N ++ 
Sbjct: 69  SLRLYAQLKSLSVPIPVASLHPLLSSLPS----APAFALFADIYRLRLPLCTTTFNIMLR 124

Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
            LC +G+   A EL R +PR     + VTYN +I   CA G++  A ++  +M  +
Sbjct: 125 HLCATGKPVRALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRER 176


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  184 bits (467), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 190/370 (51%), Gaps = 15/370 (4%)

Query: 2   EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLF---EEMANGNGEFGVVCK 57
           +A  +F ++  +FGC+P + +YN+L+N L  +     A + F   E M            
Sbjct: 96  QALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMG---------LS 146

Query: 58  PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
           PN  TY  +I   C++   DKAKEL   M ++  +P+V +Y +LI+        ++A  L
Sbjct: 147 PNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKL 206

Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ-IGVRPNAFVYNTLMDGFC 176
           F EM ++GV P+V  +N++++   K G +  AS + E +++   V PN   YN +++G C
Sbjct: 207 FDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLC 266

Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
             G+ + + E++  M+      ++++YS LI+G C +  ++GA  +Y EM   G+ PDVV
Sbjct: 267 KCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVV 326

Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
           +YNT+  G     ++E   +L+  M++ G      +Y   I GL +N  + EA+ ++  L
Sbjct: 327 VYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV-SYNILIRGLFENAKVDEAISIWELL 385

Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
                  D   Y  L+ GLCK+G L  A  +      G    D   Y+ MI+ LC +G++
Sbjct: 386 PEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRL 445

Query: 357 DKARDLFLDM 366
           D+   +   M
Sbjct: 446 DEVAGVLDQM 455



 Score =  177 bits (450), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 188/355 (52%), Gaps = 11/355 (3%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
           PN+ +YN +INGLC+ G    +  ++  M  N  G+       +  TY+T+I GLC  G 
Sbjct: 253 PNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-------DLYTYSTLIHGLCGSGN 305

Query: 76  VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
           +D A  ++ +M +  ++P+VV YN++++G+  A    E   L+  M  +G +  VVS+N+
Sbjct: 306 LDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNI 364

Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
           ++  L +N K+DEA  + EL+ +     ++  Y  L+ G C  G +N+A  +    E+  
Sbjct: 365 LIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGR 424

Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
              + F+YS +ING C+   ++    +  +M   G KP+  + N +  G     ++E A 
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
           + F  M   G       Y T I+GL K     EA  L + +    ++ ++  Y+ L++GL
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 316 CKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           C+  +L +A  L+ ++L +G    DV  +NI+IH LC+ GK++ A  L+ +M+ +
Sbjct: 545 CQGKKLDMALNLWCQALEKG-FKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 598



 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 198/386 (51%), Gaps = 43/386 (11%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G  P+VF+Y TLIN L + G+   AL LF+EM     E GV   P+   Y  +IDG  K+
Sbjct: 179 GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMP----ERGVT--PDVACYNILIDGFFKK 232

Query: 74  GFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
           G +  A E++ ++ K  ++ PN+ +YN +I+G C    ++E+  ++  M       ++ +
Sbjct: 233 GDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYT 292

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ +++ LC +G +D A+R+ + M + GV P+  VYNT+++G+   GR+    EL+  ME
Sbjct: 293 YSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVME 352

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
             GC+  V SY+ILI G  +N +++ A+S++  +  K    D + Y  L  GL +   + 
Sbjct: 353 KEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLN 411

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL---------------- 296
           +A  + +E +      DT+AY + I+GLC+ G + E   +   +                
Sbjct: 412 KALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVI 471

Query: 297 ----RILKYELDIR---------------AYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
               R  K E  +R                YN LI+GL K+ R   A+ L + +      
Sbjct: 472 NGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWK 531

Query: 338 ADVVTYNIMIHALCADGKMDKARDLF 363
            +++TY+++++ LC   K+D A +L+
Sbjct: 532 PNMITYSLLMNGLCQGKKLDMALNLW 557



 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 181/345 (52%), Gaps = 7/345 (2%)

Query: 24  TLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELF 83
           T+I    +      AL++F+ M    G     C+P   +Y ++++ L +    D+A+  F
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFG-----CQPGIRSYNSLLNALIESNKWDEAESFF 137

Query: 84  LKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKN 143
           L  +   ++PN+ TYN LI   C    +++AK L   M +QG  P+V S+  ++N L KN
Sbjct: 138 LYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKN 197

Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS-MESMGCKHNVFS 202
           G M +A +L + M + GV P+   YN L+DGF   G +  A E++   ++      N+ S
Sbjct: 198 GYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPS 257

Query: 203 YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
           Y+++ING CK  + + +  ++  M       D+  Y+TL  GL     ++ A +++ EM 
Sbjct: 258 YNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMA 317

Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
            +GV+ D   Y T ++G  + G I E +EL++ +        + +YN LI GL ++ ++ 
Sbjct: 318 ENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVD 376

Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
            A  ++  LP     AD +TY +++H LC +G ++KA  +  + E
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421



 Score =  159 bits (403), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 147/260 (56%), Gaps = 6/260 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           EA +++  L    C  +  TY  L++GLC+ G+   AL++ EE  NG G+       +T 
Sbjct: 377 EAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDL------DTF 430

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
            Y+++I+GLC+EG +D+   +  +M      PN    N++I+GF  A+   +A   F  M
Sbjct: 431 AYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNM 490

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G  P VV++N ++N L K  +  EA  L++ M+  G +PN   Y+ LM+G C   ++
Sbjct: 491 VSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKL 550

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L+      G K +V  ++I+I+G C + ++E AL LYSEM  +   P++V +NTL
Sbjct: 551 DMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTL 610

Query: 242 FIGLFEIHQVERAFKLFDEM 261
             G +++   ERA K++D +
Sbjct: 611 MEGFYKVRDFERASKIWDHI 630



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 164/310 (52%), Gaps = 3/310 (0%)

Query: 56  CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEA 114
           CK       T+I    K    D+A ++F +M +     P + +YNSL++    +N W+EA
Sbjct: 74  CKCPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEA 133

Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
           +  F+     G+ PN+ ++N+++   C+  + D+A  LL  M + G  P+ F Y TL++ 
Sbjct: 134 ESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINS 193

Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS-KGIKP 233
               G ++ A +LF  M   G   +V  Y+ILI+G+ K  +I  A  ++  +L    + P
Sbjct: 194 LAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYP 253

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
           ++  YN +  GL +  + + +F+++  M+++    D + Y T I GLC +G +  A  ++
Sbjct: 254 NIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVY 313

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           + +       D+  YN +++G  ++GR++   EL++ + +      VV+YNI+I  L  +
Sbjct: 314 KEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG-CRTVVSYNILIRGLFEN 372

Query: 354 GKMDKARDLF 363
            K+D+A  ++
Sbjct: 373 AKVDEAISIW 382



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/315 (28%), Positives = 163/315 (51%), Gaps = 7/315 (2%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  ++ ++   G  P+V  YNT++NG  R G     L L++ M          C+   V+
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEG------CR-TVVS 361

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y  +I GL +   VD+A  ++  + +++   + +TY  L+HG C     N+A  +  E  
Sbjct: 362 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 421

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           +     +  +++ ++N LC+ G++DE + +L+ M + G +PN  V N +++GF    ++ 
Sbjct: 422 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLE 481

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A   F +M S GC   V +Y+ LING  K +    A +L  EML KG KP+++ Y+ L 
Sbjct: 482 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLM 541

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL +  +++ A  L+ +    G   D   +   I GLC +G + +A++L+  ++  K  
Sbjct: 542 NGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCV 601

Query: 303 LDIRAYNCLIDGLCK 317
            ++  +N L++G  K
Sbjct: 602 PNLVTHNTLMEGFYK 616



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 6/165 (3%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A   F  +   GC P V TYNTLINGL +      A  L +EM +         KPN +
Sbjct: 482 DALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGW------KPNMI 535

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +++GLC+   +D A  L+ +  ++   P+V  +N +IHG C +    +A  L+ EM
Sbjct: 536 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 595

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAF 166
             +   PN+V+ N +M    K    + AS++ + ++Q     N +
Sbjct: 596 KQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQSWSSSNCY 640


>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
 gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
          Length = 892

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/361 (31%), Positives = 189/361 (52%), Gaps = 6/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++R  G    V+ YN+LING C+  +   A  L  EM     E G+   P+  
Sbjct: 388 DALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMV----EKGLA--PSAA 441

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           +Y+ +I GLC++G +  A EL  +M    ++ NV T+ +LI GFC   + +EA  LF +M
Sbjct: 442 SYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKM 501

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D  V PN V+FNV++   C+ G + +A +L + M+  G+ P+ + Y +L+   CLT   
Sbjct: 502 IDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGA 561

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
            +A+E    +E+     N FS + L+ G+CK   +     ++ EM ++G+K D++ +  +
Sbjct: 562 MKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVI 621

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                ++H  E+   LF EM+  GV  D   +   ID   K   IV+A+  +  +     
Sbjct: 622 VYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGC 681

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++  Y  LI+ LCKSG L  A  L   +  G  + +  TYN  +  L  +G+++KA+ 
Sbjct: 682 SPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKAKV 741

Query: 362 L 362
           L
Sbjct: 742 L 742



 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/361 (31%), Positives = 188/361 (52%), Gaps = 7/361 (1%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  L  ++   G  P+  +Y+ LI GLCR G    A+ L  EMA  NG  G     N  
Sbjct: 423 QARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMAR-NGVSG-----NVY 476

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T+TT+I G CK+G +D+A  LF KM D ++ PN VT+N +I G+C   +  +A  L+ +M
Sbjct: 477 TFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQM 536

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +D+G+ P+  ++  +++ LC      +A   ++ +    V  N+F   TLM GFC  GR+
Sbjct: 537 VDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRL 596

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
                ++  M + G K ++ S+++++    K  + E    L+ EM  KG+KPD V +  +
Sbjct: 597 TETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCM 656

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +   + +A   +D+M   G + +   Y   I+ LCK+GY+  A  L   + + ++
Sbjct: 657 IDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRF 716

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             +   YNC +D L   G L+ A  L  ++  G L A+ VT+N +I   C  G++  A D
Sbjct: 717 LPNSFTYNCFLDFLANEGELEKAKVLHATILEGCL-ANTVTFNTLIKGFCKAGQIQGAID 775

Query: 362 L 362
           L
Sbjct: 776 L 776



 Score =  179 bits (453), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 186/354 (52%), Gaps = 8/354 (2%)

Query: 17  PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
           P+V + + +++GL + GH   A  L   +    GE G+V  PN      +ID LCK+   
Sbjct: 298 PSVASCSFMVDGLRKRGHIDKAFRLACHL----GELGMV--PNLFACNALIDKLCKDRRF 351

Query: 77  DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
            +A+ LF  M +  + PN VTY  LIH  C     ++A C+F  M ++G++  V  +N +
Sbjct: 352 REAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSL 411

Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
           +N  C++    +A  LL  M++ G+ P+A  Y+ L+ G C  G +  A EL   M   G 
Sbjct: 412 INGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGV 471

Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
             NV++++ LI+G+CK+  ++ A  L+ +M+   + P+ V +N +  G   +  V +AF+
Sbjct: 472 SGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQ 531

Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
           L+D+M   G+  D + YR+ I  LC     ++A E    L      L+  +   L+ G C
Sbjct: 532 LYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFC 591

Query: 317 KSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
           K GRL   + ++  +  RGV + D++++ ++++A       +K   LF +M+ K
Sbjct: 592 KEGRLTETYHIWDEMRARGVKL-DLISFTVIVYAALKLHDGEKISVLFREMKEK 644



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/389 (28%), Positives = 190/389 (48%), Gaps = 41/389 (10%)

Query: 13  FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
            G  PN+F  N LI+ LC+      A  LF  MAN   E      PN VTY  +I  LCK
Sbjct: 329 LGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLE------PNEVTYAILIHSLCK 382

Query: 73  EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
            G +D A  +F +M+++ I   V  YNSLI+G+C  +++++A+ L  EM+++G+ P+  S
Sbjct: 383 RGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAAS 442

Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
           ++ ++  LC+ G +  A  L   M + GV  N + + TL+ GFC  G ++ A  LF  M 
Sbjct: 443 YSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMI 502

Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
                 N  +++++I GYC+   +  A  LY +M+ +G+ PD   Y +L   L       
Sbjct: 503 DSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAM 562

Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
           +A +  D+++ + V  ++++  T + G CK G + E   ++  +R    +LD+ ++  ++
Sbjct: 563 KAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIV 622

Query: 313 DGLCKSGRLKIAWELFRSLP-RGV-----------------------------LIAD--- 339
               K    +    LFR +  +GV                             +IAD   
Sbjct: 623 YAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCS 682

Query: 340 --VVTYNIMIHALCADGKMDKARDLFLDM 366
             VVTY ++I+ LC  G +  A+ L  +M
Sbjct: 683 PNVVTYTVLINHLCKSGYLSSAQILCEEM 711



 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/365 (29%), Positives = 181/365 (49%), Gaps = 6/365 (1%)

Query: 3   AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
           A  L  ++   G + +   YN L+ GLCR    + A+    E+ N   E G+V   + VT
Sbjct: 214 ARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAV----EVKNSMVERGIVA--DEVT 267

Query: 63  YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
           Y T++ G C+   ++ A E+   M   +  P+V + + ++ G       ++A  L   + 
Sbjct: 268 YRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLG 327

Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
           + G+ PN+ + N ++++LCK+ +  EA RL   M   G+ PN   Y  L+   C  G ++
Sbjct: 328 ELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMD 387

Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
            A  +F  M   G +  V+ Y+ LINGYC++     A  L +EM+ KG+ P    Y+ L 
Sbjct: 388 DALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLI 447

Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
            GL     +  A +L  EM R+GV+ + + + T I G CK+G + EA  LF  +      
Sbjct: 448 AGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVV 507

Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
            +   +N +I+G C+ G ++ A++L+  +    L  D  TY  +I  LC      KA++ 
Sbjct: 508 PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEF 567

Query: 363 FLDME 367
             D+E
Sbjct: 568 VDDLE 572



 Score =  152 bits (383), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 182/388 (46%), Gaps = 42/388 (10%)

Query: 14  GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
           G   NV+T+ TLI+G C+ G+   A  LF++M + +    VV  PN VT+  +I+G C+ 
Sbjct: 470 GVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSS----VV--PNEVTFNVMIEGYCRV 523

Query: 74  GFVDKAKELFLKMKDENINPNVVTYNSLI------------------------------- 102
           G V KA +L+ +M D  + P+  TY SLI                               
Sbjct: 524 GNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSL 583

Query: 103 ----HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
               +GFC      E   ++ EM  +GV+ +++SF VI+    K    ++ S L   M +
Sbjct: 584 TTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKE 643

Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
            GV+P+   +  ++D       + +A   +  M + GC  NV +Y++LIN  CK+  +  
Sbjct: 644 KGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSS 703

Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
           A  L  EML     P+   YN     L    ++E+A K+       G  A+T  + T I 
Sbjct: 704 AQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTFNTLIK 762

Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
           G CK G I  A++L +      +  D  +Y+ +I+ LCK G +  A++L+  +    L  
Sbjct: 763 GFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKP 822

Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
           D+V YNI+I      G+ DK   ++ DM
Sbjct: 823 DIVAYNILIRWCNIHGEFDKGLGIYSDM 850



 Score =  131 bits (329), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 153/340 (45%), Gaps = 35/340 (10%)

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           T + I+  L K      A++LF +M       +   Y + I  +C   + + A+ L   M
Sbjct: 162 TASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRM 221

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT--- 178
             +GV+ + V +NV+M  LC+N ++ EA  +   M++ G+  +   Y TL+ GFC T   
Sbjct: 222 ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEEL 281

Query: 179 --------------------------------GRVNRAEELFVSMESMGCKHNVFSYSIL 206
                                           G +++A  L   +  +G   N+F+ + L
Sbjct: 282 EMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNAL 341

Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
           I+  CK++    A  L+  M ++G++P+ V Y  L   L +   ++ A  +FD M+  G+
Sbjct: 342 IDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGI 401

Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
               + Y + I+G C++    +A  L   +          +Y+ LI GLC+ G L  A E
Sbjct: 402 RVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAME 461

Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
           L R + R  +  +V T+  +I   C DG MD+A  LF  M
Sbjct: 462 LHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKM 501



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 65/367 (17%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG---------NGEF 52
           EAA LF K+      PN  T+N +I G CR G+   A  L+++M +              
Sbjct: 493 EAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLI 552

Query: 53  GVVCKP--------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
            V+C                      N+ + TT++ G CKEG + +   ++ +M+   + 
Sbjct: 553 SVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVK 612

Query: 93  PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP------------------------ 128
            +++++  +++     +D  +   LF EM ++GV+P                        
Sbjct: 613 LDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNC 672

Query: 129 -----------NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
                      NVV++ V++N LCK+G +  A  L E M+     PN+F YN  +D    
Sbjct: 673 WDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLAN 732

Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
            G + +A+ L  ++   GC  N  +++ LI G+CK  +I+GA+ L       G  PD + 
Sbjct: 733 EGELEKAKVLHATILE-GCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCIS 791

Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
           Y+T+   L ++  + +AF+L++EM   G+  D  AY   I     +G   + + ++  + 
Sbjct: 792 YSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDMV 851

Query: 298 ILKYELD 304
            LKY  D
Sbjct: 852 NLKYADD 858



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 137/283 (48%), Gaps = 32/283 (11%)

Query: 18  NVFTYNTLINGLCRTGHTIVALNLFEEM-ANG-------------------NGEFGVV-- 55
           N F+  TL+ G C+ G      ++++EM A G                   +GE   V  
Sbjct: 579 NSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLF 638

Query: 56  -------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYA 108
                   KP+ V +T +ID   KE  + +A   + KM  +  +PNVVTY  LI+  C +
Sbjct: 639 REMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKS 698

Query: 109 NDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVY 168
              + A+ L  EM+     PN  ++N  ++ L   G++++A ++L   I  G   N   +
Sbjct: 699 GYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLANTVTF 757

Query: 169 NTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS 228
           NTL+ GFC  G++  A +L  +    G   +  SYS +IN  CK  +I  A  L++EML 
Sbjct: 758 NTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLY 817

Query: 229 KGIKPDVVIYNTLFIGLFEIH-QVERAFKLFDEMQRHGVAADT 270
           KG+KPD+V YN L I    IH + ++   ++ +M     A DT
Sbjct: 818 KGLKPDIVAYNIL-IRWCNIHGEFDKGLGIYSDMVNLKYADDT 859



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 118/248 (47%)

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           +  G+     + + I+  L K  +   A  L + M+Q     + +VY   +  +C    +
Sbjct: 152 LSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNL 211

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
           + A  L   MES G K +   Y++L+ G C+N  +  A+ + + M+ +GI  D V Y TL
Sbjct: 212 DGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTL 271

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
             G     ++E A ++ D+M          +    +DGL K G+I +A  L   L  L  
Sbjct: 272 VYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGM 331

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
             ++ A N LID LCK  R + A  LFR +    L  + VTY I+IH+LC  G MD A  
Sbjct: 332 VPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALC 391

Query: 362 LFLDMEAK 369
           +F  M  K
Sbjct: 392 MFDRMREK 399



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 118/256 (46%)

Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
           A+ LF EM+      +   +   +   C+   +D A  LL  M   GV+ +A  YN LM 
Sbjct: 179 ARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMY 238

Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
           G C   RV  A E+  SM   G   +  +Y  L+ G+C+ +E+E AL +  +MLS    P
Sbjct: 239 GLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVP 298

Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
            V   + +  GL +   +++AF+L   +   G+  + +A    ID LCK+    EA  LF
Sbjct: 299 SVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLF 358

Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
           R +     E +   Y  LI  LCK G +  A  +F  +    +   V  YN +I+  C  
Sbjct: 359 RGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQH 418

Query: 354 GKMDKARDLFLDMEAK 369
               +AR L  +M  K
Sbjct: 419 DNFHQARGLLNEMVEK 434


>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g09680
 gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
 gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 607

 Score =  184 bits (467), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 169/307 (55%), Gaps = 1/307 (0%)

Query: 59  NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
           N   +  +++  CKEG +  A+++F ++   ++ P VV++N+LI+G+C   + +E   L 
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298

Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
            +M     +P+V +++ ++N LCK  KMD A  L + M + G+ PN  ++ TL+ G    
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358

Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
           G ++  +E +  M S G + ++  Y+ L+NG+CKN ++  A ++   M+ +G++PD + Y
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418

Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
            TL  G      VE A ++  EM ++G+  D   +   + G+CK G +++A    R +  
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478

Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
              + D   Y  ++D  CK G  +  ++L + +     +  VVTYN++++ LC  G+M  
Sbjct: 479 AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKN 538

Query: 359 ARDLFLD 365
           A D+ LD
Sbjct: 539 A-DMLLD 544



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 177/359 (49%), Gaps = 9/359 (2%)

Query: 2   EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
           +A  +F ++     +P V ++NTLING C+ G+      L  +M           +P+  
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR------TRPDVF 311

Query: 62  TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
           TY+ +I+ LCKE  +D A  LF +M    + PN V + +LIHG     + +  K  + +M
Sbjct: 312 TYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKM 371

Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
           + +G+QP++V +N ++N  CKNG +  A  +++ MI+ G+RP+   Y TL+DGFC  G V
Sbjct: 372 LSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDV 431

Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
             A E+   M+  G + +   +S L+ G CK   +  A     EML  GIKPD V Y  +
Sbjct: 432 ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMM 491

Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
                +    +  FKL  EMQ  G       Y   ++GLCK G +  A  L   +  +  
Sbjct: 492 MDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGV 551

Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
             D   YN L++G     R   + + +   P   ++AD+ +Y  +++ L    K  + R
Sbjct: 552 VPDDITYNTLLEG---HHRHANSSKRYIQKPEIGIVADLASYKSIVNELDRASKDHRNR 607



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 182/345 (52%), Gaps = 6/345 (1%)

Query: 5   ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
             +M++   G   NV+ +N L+N  C+ G+   A  +F+E+   +       +P  V++ 
Sbjct: 226 GFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS------LQPTVVSFN 279

Query: 65  TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
           T+I+G CK G +D+   L  +M+     P+V TY++LI+  C  N  + A  LF EM  +
Sbjct: 280 TLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKR 339

Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
           G+ PN V F  +++   +NG++D      + M+  G++P+  +YNTL++GFC  G +  A
Sbjct: 340 GLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAA 399

Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
             +   M   G + +  +Y+ LI+G+C+  ++E AL +  EM   GI+ D V ++ L  G
Sbjct: 400 RNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG 459

Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
           + +  +V  A +   EM R G+  D   Y   +D  CK G      +L + ++   +   
Sbjct: 460 MCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPS 519

Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
           +  YN L++GLCK G++K A  L  ++    ++ D +TYN ++  
Sbjct: 520 VVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564



 Score =  173 bits (438), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 154/287 (53%)

Query: 82  LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
            ++++ D     NV  +N L++ FC   + ++A+ +F E+  + +QP VVSFN ++N  C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
           K G +DE  RL   M +   RP+ F Y+ L++  C   +++ A  LF  M   G   N  
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
            ++ LI+G+ +N EI+     Y +MLSKG++PD+V+YNTL  G  +   +  A  + D M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406

Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
            R G+  D   Y T IDG C+ G +  A+E+ + +     ELD   ++ L+ G+CK GR+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466

Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
             A    R + R  +  D VTY +M+ A C  G       L  +M++
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQS 513



 Score = 67.4 bits (163), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 72/148 (48%)

Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
            Y E+L  G   +V ++N L     +   +  A K+FDE+ +  +     ++ T I+G C
Sbjct: 227 FYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYC 286

Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
           K G + E   L   +   +   D+  Y+ LI+ LCK  ++  A  LF  + +  LI + V
Sbjct: 287 KVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346

Query: 342 TYNIMIHALCADGKMDKARDLFLDMEAK 369
            +  +IH    +G++D  ++ +  M +K
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSK 374



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 19/80 (23%), Positives = 40/80 (50%)

Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
           G+I +A++ FR  R  ++++ IR    L+D + K       W  +  +       +V  +
Sbjct: 184 GFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVF 243

Query: 344 NIMIHALCADGKMDKARDLF 363
           NI+++  C +G +  A+ +F
Sbjct: 244 NILMNKFCKEGNISDAQKVF 263


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.325    0.141    0.429 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,540,792,312
Number of Sequences: 23463169
Number of extensions: 224452115
Number of successful extensions: 901112
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8645
Number of HSP's successfully gapped in prelim test: 4347
Number of HSP's that attempted gapping in prelim test: 622479
Number of HSP's gapped (non-prelim): 89532
length of query: 369
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 225
effective length of database: 8,980,499,031
effective search space: 2020612281975
effective search space used: 2020612281975
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)