BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036461
(369 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 219/366 (59%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L ++ GC+P+V TYN+++NG+CR+G T +AL+L +M N K +
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN------VKADVF 229
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY+TIID LC++G +D A LF +M+ + I +VVTYNSL+ G C A WN+ L +M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + PNV++FNV+++ K GK+ EA+ L + MI G+ PN YNTLMDG+C+ R+
Sbjct: 290 VSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRL 349
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A + M C ++ +++ LI GYC K ++ + ++ + +G+ + V Y+ L
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +++ A +LF EM HGV D Y +DGLC NG + +A+E+F L+ K
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+L I Y +I+G+CK G+++ AW LF SLP + +V+TY +MI LC G + +A
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 362 LFLDME 367
L ME
Sbjct: 530 LLRKME 535
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/367 (31%), Positives = 199/367 (54%), Gaps = 6/367 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A ++ K+ G EP+ T+NTLI GL G A+ L + M NG C+P+ VT
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NG-----CQPDVVT 195
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y +I++G+C+ G A +L KM++ N+ +V TY+++I C + A LF EM
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+G++ +VV++N ++ LCK GK ++ + LL+ M+ + PN +N L+D F G++
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A EL+ M + G N+ +Y+ L++GYC + A ++ M+ PD+V + +L
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLI 375
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G + +V+ K+F + + G+ A+ Y + G C++G I A ELF+ +
Sbjct: 376 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 435
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
D+ Y L+DGLC +G+L+ A E+F L + + +V Y +I +C GK++ A +L
Sbjct: 436 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 495
Query: 363 FLDMEAK 369
F + K
Sbjct: 496 FCSLPCK 502
Score = 170 bits (431), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 199/402 (49%), Gaps = 43/402 (10%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA-NGNGEFGVVCKPNT 60
+A ALF ++ P++ ++ + + RT + L+ +++ NG N
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH-------NI 123
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
T +I+ C+ A + K+ P+ T+N+LI G +EA L
Sbjct: 124 YTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDR 183
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M++ G QP+VV++N I+N +C++G A LL M + V+ + F Y+T++D C G
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCK---------------NKEI--------- 216
++ A LF ME+ G K +V +Y+ L+ G CK ++EI
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303
Query: 217 -------EGALS----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
EG L LY EM+++GI P+++ YNTL G +++ A + D M R+
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363
Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
+ D + + I G C + + +++FR + + Y+ L+ G C+SG++K+A
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423
Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
ELF+ + ++ DV+TY I++ LC +GK++KA ++F D++
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 158/309 (51%), Gaps = 7/309 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PNV T+N L++ + G A L++EM G+ PN +TY T++DG C + +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITR----GI--SPNIITYNTLMDGYCMQNRL 349
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
+A + M +P++VT+ SLI G+C ++ +F + +G+ N V+++++
Sbjct: 350 SEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSIL 409
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+ C++GK+ A L + M+ GV P+ Y L+DG C G++ +A E+F ++
Sbjct: 410 VQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ Y+ +I G CK ++E A +L+ + KG+KP+V+ Y + GL + + A
Sbjct: 470 DLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANI 529
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M+ G A + Y T I ++G + + +L ++ + D + +ID L
Sbjct: 530 LLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL 589
Query: 317 KSGRLKIAW 325
SG L ++
Sbjct: 590 -SGELDKSF 597
Score = 114 bits (286), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 119/240 (49%), Gaps = 4/240 (1%)
Query: 134 NVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
NV E ++G K D+A L + MI+ P+ ++ T + N +
Sbjct: 53 NVCFRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCK 112
Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
+E G HN+++ +I+IN +C+ + A S+ +++ G +PD +NTL GLF
Sbjct: 113 QLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEG 172
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
+V A L D M +G D Y + ++G+C++G A++L R + + D+ Y+
Sbjct: 173 KVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ID LC+ G + A LF+ + + + VVTYN ++ LC GK + L DM ++
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Score = 33.1 bits (74), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 22/46 (47%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN 47
EA L K+ G PN TYNTLI R G + L EEM +
Sbjct: 526 EANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 281 bits (718), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 141/366 (38%), Positives = 219/366 (59%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ V GC+P++ TY +INGLC+ G +ALNL +M G E + V
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------ADVV 241
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y+T+ID LCK VD A LF +M ++ I P+V TY+SLI C W++A L +M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVV+FN +++ K GK+ EA +L + MIQ + PN YN+L++GFC+ R+
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A+++F M S C +V +Y+ LING+CK K++ + L+ +M +G+ + V Y TL
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G F+ + A +F +M GV + Y T +DGLCKNG + +A+ +F L+ K
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
E DI YN + +G+CK+G+++ W+LF SL + DV+ YN MI C G ++A
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 362 LFLDME 367
LF+ M+
Sbjct: 542 LFIKMK 547
Score = 226 bits (576), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 202/368 (54%), Gaps = 6/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ G +P+ T+ TL++GL + A+ L E M C+P+ V
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLV 206
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +I+GLCK G D A L KM+ I +VV Y+++I C ++A LF EM
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++P+V +++ +++ LC G+ +ASRLL M++ + PN +N+L+D F G++
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
AE+LF M N+ +Y+ LING+C + ++ A +++ M+SK PDVV YNTL
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTL 386
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +V +LF +M R G+ +T Y T I G + A +F+ +
Sbjct: 387 INGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGV 446
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+I YN L+DGLCK+G+L+ A +F L + + D+ TYNIM +C GK++ D
Sbjct: 447 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWD 506
Query: 362 LFLDMEAK 369
LF + K
Sbjct: 507 LFCSLSLK 514
Score = 184 bits (468), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 99/305 (32%), Positives = 165/305 (54%), Gaps = 7/305 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PNV T+N+LI+ + G I A LF+EM + PN VTY ++I+G C +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS------IDPNIVTYNSLINGFCMHDRL 361
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D+A+++F M ++ P+VVTYN+LI+GFC A + LF +M +G+ N V++ +
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ + D A + + M+ GV PN YNTL+DG C G++ +A +F ++
Sbjct: 422 IHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ ++++Y+I+ G CK ++E L+ + KG+KPDV+ YNT+ G + E A+
Sbjct: 482 EPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYT 541
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
LF +M+ G D+ Y T I ++G + EL + +R ++ D Y + D L
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML- 600
Query: 317 KSGRL 321
GRL
Sbjct: 601 HDGRL 605
Score = 181 bits (460), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 113/371 (30%), Positives = 192/371 (51%), Gaps = 12/371 (3%)
Query: 2 EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
EA LF +K R F P++ ++ L++ + + + ++ E+M GV
Sbjct: 48 EAVDLFGEMVKSRPF---PSIVEFSKLLSAIAKMKKFDLVISFGEKME----ILGV--SH 98
Query: 59 NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
N TY +I+ LC+ + A + KM P++VT NSL++GFC+ N +EA L
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
+M++ G QP+ V+F +++ L ++ K EA L+E M+ G +P+ Y +++G C
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
G + A L ME + +V YS +I+ CK + ++ AL+L++EM +KGI+PDV Y
Sbjct: 219 GEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
++L L + A +L +M + + + + ID K G ++EA +LF +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ +I YN LI+G C RL A ++F + + DVVTYN +I+ C K+
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 359 ARDLFLDMEAK 369
+LF DM +
Sbjct: 399 GMELFRDMSRR 409
Score = 174 bits (441), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 149/280 (53%), Gaps = 6/280 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA LF ++ +PN+ TYN+LING C A +F M + + C P+
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD------CLPDV 380
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+I+G CK V ELF M + N VTY +LIHGF A+D + A+ +F +
Sbjct: 381 VTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQ 440
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++++N +++ LCKNGK+++A + E + + + P+ + YN + +G C G+
Sbjct: 441 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGK 500
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V +LF S+ G K +V +Y+ +I+G+CK E A +L+ +M G PD YNT
Sbjct: 501 VEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNT 560
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
L + +L EM+ A D Y D L
Sbjct: 561 LIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 132/271 (48%), Gaps = 5/271 (1%)
Query: 96 VTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLEL 155
++ N+L+H +EA LF EM+ P++V F+ +++ + K K D E
Sbjct: 36 LSRNALLH-----LKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEK 90
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M +GV N + YN +++ C +++ A + M +G ++ + + L+NG+C
Sbjct: 91 MEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNR 150
Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
I A++L +M+ G +PD V + TL GLF+ ++ A L + M G D Y
Sbjct: 151 ISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGA 210
Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
I+GLCK G A+ L + K E D+ Y+ +ID LCK + A LF +
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
+ DV TY+ +I LC G+ A L DM
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 135/274 (49%), Gaps = 10/274 (3%)
Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNG----KMDEASRLLEL 155
SL F + + + CL +G+ + +S++ +L +N K+DEA L
Sbjct: 2 SLAKRFVHLRKASPSFCL------RGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGE 55
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M++ P+ ++ L+ + + ME +G HN+++Y+I+IN C+ +
Sbjct: 56 MVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQ 115
Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
+ AL++ +M+ G P +V N+L G +++ A L D+M G DT + T
Sbjct: 116 LSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 175
Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
+ GL ++ EAV L + + + D+ Y +I+GLCK G +A L + +G
Sbjct: 176 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 235
Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ ADVV Y+ +I +LC +D A +LF +M+ K
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 281 bits (718), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 145/366 (39%), Positives = 215/366 (58%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L K+ +GC+PN TY ++N +C++G T +A+ L +M N K + V
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 264
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y+ IIDGLCK G +D A LF +M+ + I N++TYN LI GFC A W++ L +M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + PNVV+F+V+++ K GK+ EA L + MI G+ P+ Y +L+DGFC +
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
++A ++ M S GC N+ +++ILINGYCK I+ L L+ +M +G+ D V YNTL
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G E+ ++ A +LF EM V + Y+ +DGLC NG +A+E+F + K
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
ELDI YN +I G+C + ++ AW+LF SLP + V TYNIMI LC G + +A
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 362 LFLDME 367
LF ME
Sbjct: 565 LFRKME 570
Score = 218 bits (554), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 118/365 (32%), Positives = 203/365 (55%), Gaps = 6/365 (1%)
Query: 5 ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
AL ++ + G N++T + +IN CR +A + ++ E PNT+T++
Sbjct: 109 ALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYE------PNTITFS 162
Query: 65 TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
T+I+GLC EG V +A EL +M + P+++T N+L++G C + EA L +M++
Sbjct: 163 TLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEY 222
Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QPN V++ ++N +CK+G+ A LL M + ++ +A Y+ ++DG C G ++ A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
LF ME G N+ +Y+ILI G+C + L +M+ + I P+VV ++ L
Sbjct: 283 FNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDS 342
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
+ ++ A +L EM G+A DT Y + IDG CK ++ +A ++ + + +
Sbjct: 343 FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
IR +N LI+G CK+ R+ ELFR + ++AD VTYN +I C GK++ A++LF
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 365 DMEAK 369
+M ++
Sbjct: 463 EMVSR 467
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/364 (33%), Positives = 183/364 (50%), Gaps = 10/364 (2%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A LF ++ + G N+ TYN LI G C G L +M PN VT
Sbjct: 282 AFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK------INPNVVT 335
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
++ +ID KEG + +A+EL +M I P+ +TY SLI GFC N ++A + M+
Sbjct: 336 FSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMV 395
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+G PN+ +FN+++N CK ++D+ L M GV + YNTL+ GFC G++N
Sbjct: 396 SKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLN 455
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A+ELF M S N+ +Y IL++G C N E E AL ++ ++ ++ D+ IYN +
Sbjct: 456 VAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIII 515
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G+ +V+ A+ LF + GV Y I GLCK G + EA LFR + +
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHA 575
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
D YN LI G + +L L R D T ++I L +DG++ K+
Sbjct: 576 PDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML-SDGRLKKS--- 631
Query: 363 FLDM 366
FLDM
Sbjct: 632 FLDM 635
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 148/291 (50%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
D A +LF M P V+ ++ L ++ L +M +G+ N+ + ++
Sbjct: 69 ADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSI 128
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C+ K+ A + +I++G PN ++TL++G CL GRV+ A EL M MG
Sbjct: 129 MINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMG 188
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
K ++ + + L+NG C + + A+ L +M+ G +P+ V Y + + + Q A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
+L +M+ + D Y IDGLCK+G + A LF + + +I YN LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGF 308
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C +GR +L R + + + +VVT++++I + +GK+ +A +L +M
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 111/225 (49%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
K D+A L MI P ++ L T + + L ME G HN+++ S
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I+IN +C+ +++ A S +++ G +P+ + ++TL GL +V A +L D M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G D T ++GLC +G EA+ L + + + Y +++ +CKSG+ +A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
EL R + + D V Y+I+I LC G +D A +LF +ME K
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 280 bits (715), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 221/366 (60%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ GC+P++FTY T++NGLC+ G +AL+L ++M G E VV
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------ 256
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
YTTIID LC V+ A LF +M ++ I PNVVTYNSLI C W++A L +M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVV+F+ +++ K GK+ EA +L + MI+ + P+ F Y++L++GFC+ R+
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A+ +F M S C NV +Y+ LI G+CK K +E + L+ EM +G+ + V YNTL
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GLF+ + A K+F +M GV D Y +DGLCK G + +A+ +F L+ K
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
E DI YN +I+G+CK+G+++ W+LF SL + +V+ Y MI C G ++A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 362 LFLDME 367
LF +M+
Sbjct: 557 LFREMK 562
Score = 243 bits (619), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/369 (36%), Positives = 208/369 (56%), Gaps = 8/369 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
EA AL ++ V +PN T+NTLI+GL A+ L + M A G C+P+
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG-------CQPDL 220
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
TY T+++GLCK G +D A L KM+ I +VV Y ++I C + N+A LF E
Sbjct: 221 FTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTE 280
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M ++G++PNVV++N ++ LC G+ +ASRLL MI+ + PN ++ L+D F G+
Sbjct: 281 MDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGK 340
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ AE+L+ M ++F+YS LING+C + ++ A ++ M+SK P+VV YNT
Sbjct: 341 LVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNT 400
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L G + +VE +LF EM + G+ +T Y T I GL + G A ++F+ +
Sbjct: 401 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDG 460
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
DI Y+ L+DGLCK G+L+ A +F L + + D+ TYNIMI +C GK++
Sbjct: 461 VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGW 520
Query: 361 DLFLDMEAK 369
DLF + K
Sbjct: 521 DLFCSLSLK 529
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 166/309 (53%), Gaps = 7/309 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PNV T++ LI+ + G + A L++EM + P+ TY+++I+G C +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIFTYSSLINGFCMHDRL 376
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D+AK +F M ++ PNVVTYN+LI GFC A E LF EM +G+ N V++N +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+ L + G D A ++ + M+ GV P+ Y+ L+DG C G++ +A +F ++
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ ++++Y+I+I G CK ++E L+ + KG+KP+V+IY T+ G E A
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADA 556
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
LF EM+ G ++ Y T I ++G + EL + +R + D + +I+ L
Sbjct: 557 LFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML- 615
Query: 317 KSGRLKIAW 325
GRL+ ++
Sbjct: 616 HDGRLEKSY 624
Score = 172 bits (435), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 186/385 (48%), Gaps = 41/385 (10%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P++ +N L++ + + + ++L E M N + + +Y +I+ C+ +
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY------DLYSYNILINCFCRRSQL 131
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
A + KM P++VT +SL++G+C+ +EA L +M QPN V+FN +
Sbjct: 132 PLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTL 191
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ L + K EA L++ M+ G +P+ F Y T+++G C G ++ A L ME
Sbjct: 192 IHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 251
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL--------------- 241
+ +V Y+ +I+ C K + AL+L++EM +KGI+P+VV YN+L
Sbjct: 252 EADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 311
Query: 242 ----------------FIGLFEIHQVE----RAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
F L + E A KL+DEM + + D + Y + I+G C
Sbjct: 312 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 371
Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
+ + EA +F + ++ YN LI G CK+ R++ ELFR + + L+ + V
Sbjct: 372 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 431
Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
TYN +I L G D A+ +F M
Sbjct: 432 TYNTLIQGLFQAGDCDMAQKIFKKM 456
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 155/290 (53%), Gaps = 10/290 (3%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L+ ++ +P++FTY++LING C A ++FE M + + C PN
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 395
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+I G CK V++ ELF +M + N VTYN+LI G A D + A+ +F +
Sbjct: 396 VTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKK 455
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV P++++++++++ LCK GK+++A + E + + + P+ + YN +++G C G+
Sbjct: 456 MVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGK 515
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V +LF S+ G K NV Y+ +I+G+C+ E A +L+ EM G P+ YNT
Sbjct: 516 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNT 575
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI----DGLCKNGYI 286
L + +L EM+ G D I DG + Y+
Sbjct: 576 LIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYL 625
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 128/255 (50%)
Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
++A LF EM+ P++V FN +++ + K K D L E M + + + + YN L
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNIL 121
Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC ++ A + M +G + ++ + S L+NGYC K I A++L +M
Sbjct: 122 INCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEY 181
Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
+P+ V +NTL GLF ++ A L D M G D + Y T ++GLCK G I A+
Sbjct: 182 QPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALS 241
Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
L + + K E D+ Y +ID LC + A LF + + +VVTYN +I LC
Sbjct: 242 LLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 301
Query: 352 ADGKMDKARDLFLDM 366
G+ A L DM
Sbjct: 302 NYGRWSDASRLLSDM 316
Score = 128 bits (321), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 148/291 (50%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+D A +LF +M P++V +N L+ N ++ L M + + ++ S+N+
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C+ ++ A +L M+++G P+ ++L++G+C R++ A L M M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
+ N +++ LI+G + + A++L M+++G +PD+ Y T+ GL + ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L +M++ + AD Y T ID LC + +A+ LF + ++ YN LI L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C GR A L + + +VVT++ +I A +GK+ +A L+ +M
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Score = 108 bits (270), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
K+D+A L M+Q P+ +N L+ + + L M+++ ++++SY+
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
ILIN +C+ ++ AL++ +M+ G +PD+V ++L G ++ A L D+M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
+T + T I GL + EAV L + + D+ Y +++GLCK G + +A
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L + + +G + ADVV Y +I ALC ++ A +LF +M+ K
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK 284
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 276 bits (706), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 143/366 (39%), Positives = 218/366 (59%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ GC+PN+ TY ++NGLC+ G T +ALNL +M E VV
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVV------ 261
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+ TIID LCK VD A LF +M+ + I PNVVTY+SLI C W++A L +M
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PN+V+FN +++ K GK EA +L + MI+ + P+ F YN+L++GFC+ R+
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
++A+++F M S C +V +Y+ LI G+CK+K +E L+ EM +G+ D V Y TL
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GLF + A K+F +M GV D Y +DGLC NG + +A+E+F ++ +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+LDI Y +I+G+CK+G++ W+LF SL + +VVTYN MI LC+ + +A
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 362 LFLDME 367
L M+
Sbjct: 562 LLKKMK 567
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 199/368 (54%), Gaps = 6/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A AL ++ G P+ T+ TLI+GL A+ L + M C+PN V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 226
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +++GLCK G D A L KM+ I +VV +N++I C ++A LF EM
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++PNVV+++ +++ LC G+ +AS+LL MI+ + PN +N L+D F G+
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
AE+L+ M ++F+Y+ L+NG+C + ++ A ++ M+SK PDVV YNTL
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTL 406
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +VE +LF EM G+ DT Y T I GL +G A ++F+ +
Sbjct: 407 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 466
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
DI Y+ L+DGLC +G+L+ A E+F + + + D+ Y MI +C GK+D D
Sbjct: 467 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 526
Query: 362 LFLDMEAK 369
LF + K
Sbjct: 527 LFCSLSLK 534
Score = 172 bits (437), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 162/305 (53%), Gaps = 7/305 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PN+ T+N LI+ + G + A L+++M + P+ TY ++++G C +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS------IDPDIFTYNSLVNGFCMHDRL 381
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
DKAK++F M ++ P+VVTYN+LI GFC + + LF EM +G+ + V++ +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+ L +G D A ++ + M+ GV P+ Y+ L+DG C G++ +A E+F M+
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
K +++ Y+ +I G CK +++ L+ + KG+KP+VV YNT+ GL ++ A+
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M+ G ++ Y T I ++G + EL R +R ++ D L+ +
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 620
Query: 317 KSGRL 321
GRL
Sbjct: 621 HDGRL 625
Score = 172 bits (436), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 180/353 (50%), Gaps = 6/353 (1%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P++ +N L++ + + V ++L E+M G+ TY +I+ C+ +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLY------TYNILINCFCRRSQI 136
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
A L KM P++VT +SL++G+C+ ++A L +M++ G +P+ ++F +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ L + K EA L++ M+Q G +PN Y +++G C G + A L ME+
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ +V ++ +I+ CK + ++ AL+L+ EM +KGI+P+VV Y++L L + A +
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M + + + ID K G VEA +L+ + + DI YN L++G C
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
RL A ++F + DVVTYN +I C +++ +LF +M +
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHR 429
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/324 (29%), Positives = 169/324 (52%), Gaps = 4/324 (1%)
Query: 50 GEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
G FG + K P+ V + ++ + K D L KM+ I + TYN LI+ F
Sbjct: 71 GLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCF 130
Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
C + + A L +MM G +P++V+ + ++N C ++ +A L++ M+++G RP+
Sbjct: 131 CRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDT 190
Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
+ TL+ G L + + A L M GC+ N+ +Y +++NG CK + + AL+L ++
Sbjct: 191 ITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNK 250
Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
M + I+ DVVI+NT+ L + V+ A LF EM+ G+ + Y + I LC G
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNI 345
+A +L + K ++ +N LID K G+ A +L+ + + + D+ TYN
Sbjct: 311 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370
Query: 346 MIHALCADGKMDKARDLFLDMEAK 369
+++ C ++DKA+ +F M +K
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSK 394
Score = 157 bits (398), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 145/262 (55%), Gaps = 6/262 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L+ + +P++FTYN+L+NG C A +FE M + + C P+
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKD------CFPDV 400
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+I G CK V+ ELF +M + + VTY +LI G + D + A+ +F +
Sbjct: 401 VTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 460
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV P++++++++++ LC NGK+++A + + M + ++ + ++Y T+++G C G+
Sbjct: 461 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V+ +LF S+ G K NV +Y+ +I+G C + ++ A +L +M G P+ YNT
Sbjct: 521 VDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNT 580
Query: 241 LFIGLFEIHQVERAFKLFDEMQ 262
L + +L EM+
Sbjct: 581 LIRAHLRDGDKAASAELIREMR 602
Score = 138 bits (347), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 135/272 (49%)
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
Y ++ + ++A LF M+ P++V FN +++ + K K D L E M
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++ + + YN L++ FC +++ A L M +G + ++ + S L+NGYC K I
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A++L +M+ G +PD + + TL GLF ++ A L D M + G + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
+GLCK G A+ L + K E D+ +N +ID LCK + A LF+ + +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+VVTY+ +I LC+ G+ A L DM K
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 146/291 (50%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+D A LF M P++V +N L+ ++ L +M + + ++N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C+ ++ A LL M+++G P+ ++L++G+C R++ A L M MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
+ + +++ LI+G + + A++L M+ +G +P++V Y + GL + + A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L ++M+ + AD + T ID LCK ++ +A+ LF+ + ++ Y+ LI L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C GR A +L + + ++VT+N +I A +GK +A L+ DM
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDM 356
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 273 bits (699), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 142/365 (38%), Positives = 215/365 (58%), Gaps = 6/365 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A L ++ G +PN TY ++N +C++G T +A+ L +M N K + V
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN------IKLDAV 264
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y+ IIDGLCK+G +D A LF +M+ + +++TYN+LI GFC A W++ L +M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + PNVV+F+V+++ K GK+ EA +LL+ M+Q G+ PN YN+L+DGFC R+
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A ++ M S GC ++ +++ILINGYCK I+ L L+ EM +G+ + V YNTL
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + ++E A KLF EM V D +Y+ +DGLC NG + +A+E+F + K
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKM 504
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
ELDI Y +I G+C + ++ AW+LF SLP + D YNIMI LC + KA
Sbjct: 505 ELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADI 564
Query: 362 LFLDM 366
LF M
Sbjct: 565 LFRKM 569
Score = 229 bits (583), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 123/368 (33%), Positives = 202/368 (54%), Gaps = 6/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L ++ G +P + T NTL+NGLC G A+ L + M E G +PN V
Sbjct: 176 EALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV----ETGF--QPNEV 229
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +++ +CK G A EL KM++ NI + V Y+ +I G C + A LF EM
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 289
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G + +++++N ++ C G+ D+ ++LL MI+ + PN ++ L+D F G++
Sbjct: 290 EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKL 349
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A++L M G N +Y+ LI+G+CK +E A+ + M+SKG PD++ +N L
Sbjct: 350 READQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNIL 409
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + ++++ +LF EM GV A+T Y T + G C++G + A +LF+ + +
Sbjct: 410 INGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRV 469
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
DI +Y L+DGLC +G L+ A E+F + + + D+ Y I+IH +C K+D A D
Sbjct: 470 RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWD 529
Query: 362 LFLDMEAK 369
LF + K
Sbjct: 530 LFCSLPLK 537
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 195/365 (53%), Gaps = 6/365 (1%)
Query: 5 ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
AL ++ G +++T + +IN CR A + ++ E P+TV +
Sbjct: 109 ALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYE------PDTVIFN 162
Query: 65 TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
T+++GLC E V +A EL +M + P ++T N+L++G C ++A L M++
Sbjct: 163 TLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVET 222
Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G QPN V++ ++N +CK+G+ A LL M + ++ +A Y+ ++DG C G ++ A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
LF ME G K ++ +Y+ LI G+C + L +M+ + I P+VV ++ L
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
+ ++ A +L EM + G+A +T Y + IDG CK + EA+++ + + D
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
I +N LI+G CK+ R+ ELFR + +IA+ VTYN ++ C GK++ A+ LF
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 365 DMEAK 369
+M ++
Sbjct: 463 EMVSR 467
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 120/361 (33%), Positives = 186/361 (51%), Gaps = 10/361 (2%)
Query: 6 LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
LF ++ + G + ++ TYNTLI G C G L +M PN VT++
Sbjct: 285 LFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK------ISPNVVTFSV 338
Query: 66 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
+ID KEG + +A +L +M I PN +TYNSLI GFC N EA + M+ +G
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
P++++FN+++N CK ++D+ L M GV N YNTL+ GFC +G++ A+
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
+LF M S + ++ SY IL++G C N E+E AL ++ ++ ++ D+ IY + G+
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
+V+ A+ LF + GV D AY I LC+ + +A LFR + + D
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
YN LI A EL + ADV T ++I+ L + G++DK+ FLD
Sbjct: 579 LTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINML-SSGELDKS---FLD 634
Query: 366 M 366
M
Sbjct: 635 M 635
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 147/290 (50%)
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D A +LF M P V+ +N L + L +M +G+ ++ + +++
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+N C+ K+ A + ++++G P+ ++NTL++G CL RV+ A EL M MG
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
K + + + L+NG C N ++ A+ L M+ G +P+ V Y + + + Q A +
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M+ + D Y IDGLCK+G + A LF + I ++ DI YN LI G C
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFC 309
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
+GR +L R + + + +VVT++++I + +GK+ +A L +M
Sbjct: 310 NAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 150/296 (50%), Gaps = 6/296 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L ++ G PN TYN+LI+G C+ A+ + + M + C P+ +
Sbjct: 351 EADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG------CDPDIM 404
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T+ +I+G CK +D ELF +M + N VTYN+L+ GFC + AK LF EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + V+P++VS+ ++++ LC NG++++A + + + + + +Y ++ G C +V
Sbjct: 465 VSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKV 524
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A +LF S+ G K + +Y+I+I+ C+ + A L+ +M +G PD + YN L
Sbjct: 525 DDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNIL 584
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
A +L +EM+ G AD + I+ L +++ T R
Sbjct: 585 IRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTR 640
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 115/225 (51%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
K D+A L MIQ P +N L T + L MES G H++++ S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I+IN +C+ +++ A S +++ G +PD VI+NTL GL +V A +L D M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G T ++GLC NG + +AV L + ++ + Y +++ +CKSG+ +A
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
EL R + + D V Y+I+I LC DG +D A +LF +ME K
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 292
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 273 bits (697), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 219/366 (59%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ GC+P++ TY ++NGLC+ G T +A NL +M G E P +
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE------PGVL 257
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y TIIDGLCK +D A LF +M+ + I PNVVTY+SLI C W++A L +M
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + P+V +F+ +++ K GK+ EA +L + M++ + P+ Y++L++GFC+ R+
Sbjct: 318 IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRL 377
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A+++F M S C +V +Y+ LI G+CK K +E + ++ EM +G+ + V YN L
Sbjct: 378 DEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNIL 437
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GLF+ + A ++F EM GV + Y T +DGLCKNG + +A+ +F L+ K
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
E I YN +I+G+CK+G+++ W+LF +L + DVV YN MI C G ++A
Sbjct: 498 EPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADA 557
Query: 362 LFLDME 367
LF +M+
Sbjct: 558 LFKEMK 563
Score = 243 bits (620), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 135/369 (36%), Positives = 209/369 (56%), Gaps = 8/369 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
EA AL ++ V G +PN T+NTLI+GL A+ L + M A G C+P+
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG-------CQPDL 221
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY +++GLCK G D A L KM+ + P V+ YN++I G C ++A LF E
Sbjct: 222 VTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M +G++PNVV+++ +++ LC G+ +ASRLL MI+ + P+ F ++ L+D F G+
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ AE+L+ M ++ +YS LING+C + ++ A ++ M+SK PDVV YNT
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L G + +VE ++F EM + G+ +T Y I GL + G A E+F+ +
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDG 461
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
+I YN L+DGLCK+G+L+ A +F L R + + TYNIMI +C GK++
Sbjct: 462 VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 521
Query: 361 DLFLDMEAK 369
DLF ++ K
Sbjct: 522 DLFCNLSLK 530
Score = 184 bits (466), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/403 (30%), Positives = 194/403 (48%), Gaps = 47/403 (11%)
Query: 2 EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
+A ALF +K R F P++ ++ L++ + + V ++L E+M N G+
Sbjct: 64 DAVALFGEMVKSRPF---PSIIEFSKLLSAIAKMNKFDVVISLGEQMQN----LGI--PH 114
Query: 59 NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
N TY+ +I+ C+ + A + KM PN+VT +SL++G+C++ +EA L
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 119 IEMMDQGVQPNVVSFN-----------------------------------VIMNELCKN 143
+M G QPN V+FN V++N LCK
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 144 GKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSY 203
G D A LL M Q + P +YNT++DG C ++ A LF ME+ G + NV +Y
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 204 SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
S LI+ C A L S+M+ + I PDV ++ L + ++ A KL+DEM +
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
+ Y + I+G C + + EA ++F + D+ YN LI G CK R++
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
E+FR + + L+ + VTYNI+I L G D A+++F +M
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 148/270 (54%), Gaps = 6/270 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L+ ++ +P++ TY++LING C A +FE M + + C P+
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH------CFPDV 396
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+I G CK V++ E+F +M + N VTYN LI G A D + A+ +F E
Sbjct: 397 VTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKE 456
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++++N +++ LCKNGK+++A + E + + + P + YN +++G C G+
Sbjct: 457 MVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V +LF ++ G K +V +Y+ +I+G+C+ E A +L+ EM G P+ YNT
Sbjct: 517 VEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNT 576
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
L E + +L EM+ G A D
Sbjct: 577 LIRARLRDGDREASAELIKEMRSCGFAGDA 606
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 129/255 (50%)
Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
++A LF EM+ P+++ F+ +++ + K K D L E M +G+ N + Y+ L
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC ++ A + M +G + N+ + S L+NGYC +K I A++L +M G
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
+P+ V +NTL GLF ++ A L D M G D Y ++GLCK G A
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
L + K E + YN +IDGLCK + A LF+ + + +VVTY+ +I LC
Sbjct: 243 LLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLC 302
Query: 352 ADGKMDKARDLFLDM 366
G+ A L DM
Sbjct: 303 NYGRWSDASRLLSDM 317
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 151/291 (51%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+D A LF +M P+++ ++ L+ N ++ L +M + G+ N ++++
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C+ ++ A +L M+++G PN ++L++G+C + R++ A L M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
+ N +++ LI+G + + A++L M++KG +PD+V Y + GL + + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L ++M++ + Y T IDGLCK ++ +A+ LF+ + ++ Y+ LI L
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C GR A L + + DV T++ +I A +GK+ +A L+ +M
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 108/207 (52%), Gaps = 6/207 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
E +F ++ G N TYN LI GL + G +A +F+EM + GV PN +
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD----GV--PPNIM 467
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T++DGLCK G ++KA +F ++ + P + TYN +I G C A + LF +
Sbjct: 468 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNL 527
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+GV+P+VV++N +++ C+ G +EA L + M + G PN+ YNTL+ G
Sbjct: 528 SLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDR 587
Query: 182 NRAEELFVSMESMGCKHNVFSYSILIN 208
+ EL M S G + + ++ N
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 119/235 (50%), Gaps = 4/235 (1%)
Query: 139 ELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
+L +NG K+D+A L M++ P+ ++ L+ + + L M+++
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
G HN ++YSILIN +C+ ++ AL++ +M+ G +P++V ++L G ++ A
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
L D+M G +T + T I GL + EA+ L + + D+ Y +++G
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
LCK G +A+ L + +G L V+ YN +I LC MD A +LF +ME K
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A +F L+ EP ++TYN +I G+C+ G +LF ++ GV KP+ V
Sbjct: 484 KAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK----GV--KPDVV 537
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y T+I G C++G ++A LF +MK++ PN YN+LI D + L EM
Sbjct: 538 AYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEA 149
G + + ++ N L +G++D++
Sbjct: 598 RSCGFAGDASTIGLVTNML-HDGRLDKS 624
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 272 bits (696), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 143/366 (39%), Positives = 218/366 (59%), Gaps = 9/366 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ GC+P++ TY T++NGLC+ G +ALNL +M K N V
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAAR------IKANVV 259
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+ TIID LCK V+ A +LF +M+ + I PNVVTYNSLI+ C W++A L M
Sbjct: 260 IFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVV+FN +++ K GK+ EA +L E MIQ + P+ YN L++GFC+ R+
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A+++F M S C N+ +Y+ LING+CK K +E + L+ EM +G+ + V Y T+
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G F+ + A +F +M + V D Y + GLC G + A+ +F+ L+ +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
EL+I YN +I+G+CK+G++ AW+LF SL + DVVTYN MI LC+ + +A D
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 362 LFLDME 367
LF M+
Sbjct: 557 LFRKMK 562
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 191/371 (51%), Gaps = 12/371 (3%)
Query: 2 EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
+A LF +K R F P++ +N L++ + + + ++L E+M G+
Sbjct: 66 DAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI--SH 116
Query: 59 NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
+ TY+ I+ C+ + A + KM P++VT +SL++G+C++ ++A L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
+M++ G +P+ +F +++ L + K EA L++ M+Q G +P+ Y T+++G C
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
G ++ A L ME+ K NV ++ +I+ CK + +E A+ L++EM +KGI+P+VV Y
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
N+L L + A +L M + + + ID K G +VEA +L +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ D YN LI+G C RL A ++F+ + + ++ TYN +I+ C +++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 359 ARDLFLDMEAK 369
+LF +M +
Sbjct: 417 GVELFREMSQR 427
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 140/269 (52%), Gaps = 9/269 (3%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L ++ +P+ TYN LING C A +F+ M + + C PN
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD------CLPNI 398
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
TY T+I+G CK V+ ELF +M + N VTY ++I GF A D + A+ +F +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ V ++++++++++ LC GK+D A + + + + + N F+YNT+++G C G+
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V A +LF S+ K +V +Y+ +I+G C + ++ A L+ +M G P+ YNT
Sbjct: 519 VGEAWDLFC---SLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAAD 269
L + +L EM+ G D
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGD 604
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 153/291 (52%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
VD A +LF M P++V +N L+ N + L +M G+ ++ ++++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
+N C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
K + F+++ LI+G + + A++L +M+ +G +PD+V Y T+ GL + ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L ++M+ + A+ + T ID LCK ++ AV+LF + ++ YN LI+ L
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C GR A L ++ + +VVT+N +I A +GK+ +A L +M
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 137/258 (53%)
Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
++A LF +M+ P++V FN +++ + K K + L E M +G+ + + Y+
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC +++ A + M +G + ++ + S L+NGYC +K I A++L +M+ G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
KPD + TL GLF ++ A L D+M + G D Y T ++GLCK G I A+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
L + + + ++ +N +ID LCK +++A +LF + + +VVTYN +I+ LC
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 352 ADGKMDKARDLFLDMEAK 369
G+ A L +M K
Sbjct: 305 NYGRWSDASRLLSNMLEK 322
Score = 119 bits (297), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 139/293 (47%), Gaps = 16/293 (5%)
Query: 79 AKELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
AK LF+ + I P V ++ +L C+ + A + E ++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
N L K+D+A L M++ P+ +N L+ + L M+++G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
H++++YSI IN +C+ ++ AL++ ++M+ G +PD+V ++L G ++ A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L D+M G DT+ + T I GL + EAV L + + D+ Y +++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
K G + +A L + + A+VV +N +I +LC ++ A DLF +ME K
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETK 287
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A +F L+ E N+F YNT+I G+C+ G A +LF ++ KP+ VT
Sbjct: 487 ALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS---------IKPDVVT 537
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y T+I GLC + + +A +LF KMK++ PN TYN+LI D + L EM
Sbjct: 538 YNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMR 597
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEA 149
G + + +++ N L +G++D++
Sbjct: 598 SSGFVGDASTISLVTNML-HDGRLDKS 623
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 272 bits (695), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 217/366 (59%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ V GC+P++ TY ++NGLC+ G +AL+L ++M G E P V
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE------PGVV 257
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y TIID LC V+ A LF +M ++ I PNVVTYNSLI C W++A L +M
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 317
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVV+F+ +++ K GK+ EA +L + MI+ + P+ F Y++L++GFC+ R+
Sbjct: 318 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 377
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A+ +F M S C NV +Y+ LI G+CK K ++ + L+ EM +G+ + V Y TL
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G F+ + + A +F +M GV D Y +DGLC NG + A+ +F L+ K
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
E DI YN +I+G+CK+G+++ W+LF SL + +VVTY M+ C G ++A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 362 LFLDME 367
LF +M+
Sbjct: 558 LFREMK 563
Score = 241 bits (615), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 134/373 (35%), Positives = 207/373 (55%), Gaps = 16/373 (4%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A +L ++ G +P+ FT+NTLI+GL R A+ L + M C+P+ V
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG------CQPDLV 222
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +++GLCK G +D A L KM+ I P VV YN++I C + N+A LF EM
Sbjct: 223 TYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM 282
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++PNVV++N ++ LC G+ +ASRLL MI+ + PN ++ L+D F G++
Sbjct: 283 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 342
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
AE+L+ M ++F+YS LING+C + ++ A ++ M+SK P+VV YNTL
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL-----CKNGYIVEAVELFRTL 296
G + +V+ +LF EM + G+ +T Y T I G C N IV F+ +
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV-----FKQM 457
Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
DI Y+ L+DGLC +G+++ A +F L R + D+ TYNIMI +C GK+
Sbjct: 458 VSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKV 517
Query: 357 DKARDLFLDMEAK 369
+ DLF + K
Sbjct: 518 EDGWDLFCSLSLK 530
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 183/353 (51%), Gaps = 6/353 (1%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P++ ++ L++ + + + ++L E+M N G+ N TY+ +I+ C+ +
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQN----LGI--SHNLYTYSILINCFCRRSQL 132
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
A + KM P++VT NSL++GFC+ N ++A L +M++ G QP+ +FN +
Sbjct: 133 SLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ L ++ + EA L++ M+ G +P+ Y +++G C G ++ A L ME
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ V Y+ +I+ C K + AL+L++EM +KGI+P+VV YN+L L + A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M + + + ID K G +VEA +L+ + + DI Y+ LI+G C
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
RL A +F + +VVTYN +I C ++D+ +LF +M +
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/309 (31%), Positives = 161/309 (52%), Gaps = 7/309 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PNV T++ LI+ + G + A L++EM + P+ TY+++I+G C +
Sbjct: 324 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIFTYSSLINGFCMHDRL 377
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D+AK +F M ++ PNVVTYN+LI GFC A +E LF EM +G+ N V++ +
Sbjct: 378 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ + + D A + + M+ GV P+ Y+ L+DG C G+V A +F ++
Sbjct: 438 IHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKM 497
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ ++++Y+I+I G CK ++E L+ + KG+KP+VV Y T+ G E A
Sbjct: 498 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADA 557
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
LF EM+ G D+ Y T I ++G + EL R +R ++ D L+ +
Sbjct: 558 LFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNML 616
Query: 317 KSGRLKIAW 325
GRL ++
Sbjct: 617 HDGRLDKSF 625
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 149/262 (56%), Gaps = 6/262 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L+ ++ +P++FTY++LING C A ++FE M + + C PN
Sbjct: 343 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 396
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+I G CK VD+ ELF +M + N VTY +LIHGF A + + A+ +F +
Sbjct: 397 VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQ 456
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV P++++++++++ LC NGK++ A + E + + + P+ + YN +++G C G+
Sbjct: 457 MVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGK 516
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V +LF S+ G K NV +Y+ +++G+C+ E A +L+ EM +G PD YNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNT 576
Query: 241 LFIGLFEIHQVERAFKLFDEMQ 262
L + +L EM+
Sbjct: 577 LIRAHLRDGDKAASAELIREMR 598
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 128/255 (50%)
Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
++A LF +M+ P++V F+ +++ + K K D L E M +G+ N + Y+ L
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIL 122
Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC +++ A + M +G + ++ + + L+NG+C I A+SL +M+ G
Sbjct: 123 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
+PD +NTL GLF ++ A L D M G D Y ++GLCK G I A+
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
L + + K E + YN +ID LC + A LF + + +VVTYN +I LC
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 352 ADGKMDKARDLFLDM 366
G+ A L DM
Sbjct: 303 NYGRWSDASRLLSDM 317
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 147/291 (50%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+D A LF M P++V ++ L+ N ++ L +M + G+ N+ ++++
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C+ ++ A +L M+++G P+ N+L++GFC R++ A L M MG
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
+ + F+++ LI+G ++ A++L M+ KG +PD+V Y + GL + ++ A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L +M++ + Y T ID LC + +A+ LF + ++ YN LI L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C GR A L + + +VVT++ +I A +GK+ +A L+ +M
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Score = 121 bits (303), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 121/225 (53%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
K+D+A L M++ P+ ++ L+ + + L M+++G HN+++YS
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
ILIN +C+ ++ AL++ ++M+ G +PD+V N+L G +++ A L +M
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G D++ + T I GL ++ EAV L + + + D+ Y +++GLCK G + +A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L + + +G + VV YN +I ALC ++ A +LF +M+ K
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Score = 35.8 bits (81), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/212 (16%), Positives = 85/212 (40%), Gaps = 39/212 (18%)
Query: 156 MIQIGVRPNAFVYNTLM-DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNK 214
+ I N FV+ +L+ G C T + + F + G +++ SI +
Sbjct: 4 LFAISSTGNRFVHRSLLGKGKCGTAPPSFSHCSFWVRDFSGVRYDYRKISI---NRLNDL 60
Query: 215 EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYR 274
+++ A++L+ +M+ P +V ++ L + ++++ + L ++MQ G++ + + Y
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 275 TFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRG 334
I+ C+ + A+ + + +K+ +E
Sbjct: 121 ILINCFCRRSQLSLALAVLAKM------------------------MKLGYE-------- 148
Query: 335 VLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
D+VT N +++ C ++ A L M
Sbjct: 149 ---PDIVTLNSLLNGFCHGNRISDAVSLVGQM 177
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 12/86 (13%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCK-PNT 60
EA ALF +++ G P+ TYNTLI R G + L EM + C+
Sbjct: 554 EADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS--------CRFVGD 605
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKM 86
+ ++ + +G +DK+ FLKM
Sbjct: 606 ASTIGLVTNMLHDGRLDKS---FLKM 628
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 271 bits (694), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 215/366 (58%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ GC+PN+ TY ++NGLC+ G +A NL +M E N V
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE------ANVV 261
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y+T+ID LCK D A LF +M+++ + PNV+TY+SLI C W++A L +M
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVV+FN +++ K GK+ EA +L + MI+ + P+ F Y++L++GFC+ R+
Sbjct: 322 IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 381
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A+ +F M S C NV +Y+ LING+CK K I+ + L+ EM +G+ + V Y TL
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G F+ + A +F +M GV + Y T +DGLCKNG + +A+ +F L+ K
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
E I YN +I+G+CK+G+++ W+LF SL + DV+ YN MI C G ++A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 362 LFLDME 367
LF M
Sbjct: 562 LFRKMR 567
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/368 (34%), Positives = 201/368 (54%), Gaps = 6/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A AL ++ G P+ T+ TLI+GL A+ L + M C+PN V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 226
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +++GLCK G +D A L KM+ I NVV Y+++I C ++A LF EM
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++GV+PNV++++ +++ LC + +ASRLL MI+ + PN +N L+D F G++
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
AE+L+ M ++F+YS LING+C + ++ A ++ M+SK P+VV YNTL
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +++ +LF EM + G+ +T Y T I G + A +F+ +
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+I YN L+DGLCK+G+L+ A +F L R + + TYNIMI +C GK++ D
Sbjct: 467 HPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 526
Query: 362 LFLDMEAK 369
LF + K
Sbjct: 527 LFCSLSLK 534
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 185/353 (52%), Gaps = 6/353 (1%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P++F +N L++ + + + ++L E+M G+ N TY +I+ C+ +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 136
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
A L KM P++VT +SL++G+C+ ++A L +M++ G +P+ ++F +
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ L + K EA L++ M+Q G +PN Y +++G C G ++ A L ME+
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ NV YS +I+ CK + + AL+L++EM +KG++P+V+ Y++L L + A +
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M + + + ID K G +VEA +L+ + + DI Y+ LI+G C
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
RL A +F + +VVTYN +I+ C ++D+ +LF +M +
Sbjct: 377 MHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 141/254 (55%), Gaps = 6/254 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PNV T+N LI+ + G + A L++EM + P+ TY+++I+G C +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRS------IDPDIFTYSSLINGFCMHDRL 381
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D+AK +F M ++ PNVVTYN+LI+GFC A +E LF EM +G+ N V++ +
Sbjct: 382 DEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTL 441
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ + D A + + M+ GV PN YNTL+DG C G++ +A +F ++
Sbjct: 442 IHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ +++Y+I+I G CK ++E L+ + KG+KPDV+IYNT+ G E A
Sbjct: 502 EPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADA 561
Query: 257 LFDEMQRHGVAADT 270
LF +M+ G D+
Sbjct: 562 LFRKMREDGPLPDS 575
Score = 166 bits (419), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 138/234 (58%), Gaps = 6/234 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L+ ++ +P++FTY++LING C A ++FE M + + C PN
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 400
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+I+G CK +D+ ELF +M + N VTY +LIHGF A D + A+ +F +
Sbjct: 401 VTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 460
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++++N +++ LCKNGK+++A + E + + + P + YN +++G C G+
Sbjct: 461 MVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 520
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
V +LF S+ G K +V Y+ +I+G+C+ E A +L+ +M G PD
Sbjct: 521 VEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 132/269 (49%)
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
Y ++ ++ ++A LF M+ P++ FN +++ + K K D L E M
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G+ N + YN L++ FC +++ A L M +G + ++ + S L+NGYC K I
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A++L +M+ G +PD + + TL GLF ++ A L D M + G + Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
+GLCK G I A L + K E ++ Y+ +ID LCK A LF + +
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDM 366
+V+TY+ +I LC + A L DM
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDM 321
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 146/291 (50%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+D A LF M P++ +N L+ ++ L +M G+ N+ ++N+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C+ ++ A LL M+++G P+ ++L++G+C R++ A L M MG
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
+ + +++ LI+G + + A++L M+ +G +P++V Y + GL + ++ AF
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L ++M+ + A+ Y T ID LCK + +A+ LF + ++ Y+ LI L
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C R A L + + +VVT+N +I A +GK+ +A L+ +M
Sbjct: 306 CNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEM 356
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 270 bits (691), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 140/366 (38%), Positives = 216/366 (59%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ GC+PN+ TY ++NGLC+ G +A NL +M E VV
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV------ 186
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+ TIID LCK VD A LF +M+ + I PNVVTY+SLI C W++A L +M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PN+V+FN +++ K GK EA +L + MI+ + P+ F YN+L++GFC+ R+
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
++A+++F M S C ++ +Y+ LI G+CK+K +E L+ EM +G+ D V Y TL
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GLF + A K+F +M GV D Y +DGLC NG + +A+E+F ++ +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+LDI Y +I+G+CK+G++ W+LF SL + +VVTYN MI LC+ + +A
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 362 LFLDME 367
L M+
Sbjct: 487 LLKKMK 492
Score = 225 bits (574), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 198/368 (53%), Gaps = 6/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A AL ++ G P+ T+ TLI+GL A+ L + M C+PN V
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRG------CQPNLV 151
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +++GLCK G +D A L KM+ I +VV +N++I C ++A LF EM
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++PNVV+++ +++ LC G+ +AS+LL MI+ + PN +N L+D F G+
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
AE+L M ++F+Y+ LING+C + ++ A ++ M+SK PD+ YNTL
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 331
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +VE +LF EM G+ DT Y T I GL +G A ++F+ +
Sbjct: 332 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 391
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
DI Y+ L+DGLC +G+L+ A E+F + + + D+ Y MI +C GK+D D
Sbjct: 392 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWD 451
Query: 362 LFLDMEAK 369
LF + K
Sbjct: 452 LFCSLSLK 459
Score = 176 bits (445), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 190/385 (49%), Gaps = 41/385 (10%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P++F +N L++ + + + ++L E+M G+ N TY +I+ C+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQ----RLGI--SHNLYTYNILINCFCRRSQI 61
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
A L KM P++VT +SL++G+C+ ++A L +M++ G +P+ ++F +
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ L + K EA L++ M+Q G +PN Y +++G C G ++ A L ME+
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL--------------- 241
+ +V ++ +I+ CK + ++ AL+L+ EM +KGI+P+VV Y++L
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 242 ----------------FIGLFEIHQVERAF----KLFDEMQRHGVAADTWAYRTFIDGLC 281
F L + E F KL D+M + + D + Y + I+G C
Sbjct: 242 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC 301
Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
+ + +A ++F + D+ YN LI G CKS R++ ELFR + L+ D V
Sbjct: 302 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 361
Query: 342 TYNIMIHALCADGKMDKARDLFLDM 366
TY +I L DG D A+ +F M
Sbjct: 362 TYTTLIQGLFHDGDCDNAQKVFKQM 386
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/309 (29%), Positives = 163/309 (52%), Gaps = 7/309 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PN+ T+N LI+ + G + A L ++M + + P+ TY ++I+G C +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSID------PDIFTYNSLINGFCMHDRL 306
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
DKAK++F M ++ P++ TYN+LI GFC + + LF EM +G+ + V++ +
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+ L +G D A ++ + M+ GV P+ Y+ L+DG C G++ +A E+F M+
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
K +++ Y+ +I G CK +++ L+ + KG+KP+VV YNT+ GL ++ A+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M+ G D+ Y T I ++G + EL R +R ++ D L+ +
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANML 545
Query: 317 KSGRLKIAW 325
GRL ++
Sbjct: 546 HDGRLDKSF 554
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 164/312 (52%)
Query: 58 PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
P+ + ++ + K D L KM+ I+ N+ TYN LI+ FC + + A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
+MM G +P++V+ + ++N C ++ +A L++ M+++G RP+ + TL+ G L
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
+ + A L M GC+ N+ +Y +++NG CK +I+ A +L ++M + I+ DVVI
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
+NT+ L + V+ A LF EM+ G+ + Y + I LC G +A +L +
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
K ++ +N LID K G+ A +L + + + D+ TYN +I+ C ++D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 358 KARDLFLDMEAK 369
KA+ +F M +K
Sbjct: 308 KAKQMFEFMVSK 319
Score = 112 bits (281), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 110/214 (51%)
Query: 156 MIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
M++ P+ F +N L+ + + L M+ +G HN+++Y+ILIN +C+ +
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
I AL+L +M+ G +P +V ++L G ++ A L D+M G DT + T
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
I GL + EAV L + + ++ Y +++GLCK G + +A+ L +
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ ADVV +N +I +LC +D A +LF +ME K
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 214
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 270 bits (689), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 138/366 (37%), Positives = 216/366 (59%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ GC+P++ TY T++NGLC+ G +AL+L ++M G E VV
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV------ 259
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y TIIDGLCK +D A LF +M ++ I P+V TY+SLI C W++A L +M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PNVV+F+ +++ K GK+ EA +L + MI+ + P+ F Y++L++GFC+ R+
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A+ +F M S C NV +YS LI G+CK K +E + L+ EM +G+ + V Y TL
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G F+ + A +F +M GV + Y +DGLCKNG + +A+ +F L+
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
E DI YN +I+G+CK+G+++ WELF +L + +V+ YN MI C G ++A
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 362 LFLDME 367
L M+
Sbjct: 560 LLKKMK 565
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 128/368 (34%), Positives = 208/368 (56%), Gaps = 6/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A AL ++ G +P+ FT+ TLI+GL A+ L ++M C+P+ V
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG------CQPDLV 224
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T+++GLCK G +D A L KM+ I +VV YN++I G C ++A LF EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++P+V +++ +++ LC G+ +ASRLL MI+ + PN ++ L+D F G++
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
AE+L+ M ++F+YS LING+C + ++ A ++ M+SK P+VV Y+TL
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTL 404
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +VE +LF EM + G+ +T Y T I G + A +F+ + +
Sbjct: 405 IKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 464
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+I YN L+DGLCK+G+L A +F L R + D+ TYNIMI +C GK++ +
Sbjct: 465 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWE 524
Query: 362 LFLDMEAK 369
LF ++ K
Sbjct: 525 LFCNLSLK 532
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 152/270 (56%), Gaps = 6/270 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L+ ++ +P++FTY++LING C A ++FE M + + C PN
Sbjct: 345 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD------CFPNV 398
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY+T+I G CK V++ ELF +M + N VTY +LIHGF A D + A+ +F +
Sbjct: 399 VTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 458
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++++N++++ LCKNGK+ +A + E + + + P+ + YN +++G C G+
Sbjct: 459 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 518
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V ELF ++ G NV +Y+ +I+G+C+ E A SL +M G P+ YNT
Sbjct: 519 VEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNT 578
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
L E + +L EM+ G A D
Sbjct: 579 LIRARLRDGDREASAELIKEMRSCGFAGDA 608
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 192/371 (51%), Gaps = 12/371 (3%)
Query: 2 EAAALF---MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKP 58
+A LF +K R F P++ +N L++ + + + ++L E+M G+
Sbjct: 66 DAVDLFGDMVKSRPF---PSIVEFNKLLSAVAKMNKFELVISLGEQMQT----LGI--SH 116
Query: 59 NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
+ TY+ I+ C+ + A + KM P++VT +SL++G+C++ ++A L
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
+M++ G +P+ +F +++ L + K EA L++ M+Q G +P+ Y T+++G C
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
G ++ A L ME + +V Y+ +I+G CK K ++ AL+L++EM +KGI+PDV Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
++L L + A +L +M + + + ID K G +VEA +L+ +
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ DI Y+ LI+G C RL A +F + +VVTY+ +I C ++++
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 359 ARDLFLDMEAK 369
+LF +M +
Sbjct: 417 GMELFREMSQR 427
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 153/291 (52%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
VD A +LF M P++V +N L+ N + L +M G+ ++ ++++
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
+N C+ ++ A +L M+++G P+ ++L++G+C + R++ A L M MG
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
K + F+++ LI+G + + A++L +M+ +G +PD+V Y T+ GL + ++ A
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L +M++ + AD Y T IDGLCK ++ +A+ LF + D+ Y+ LI L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C GR A L + + +VVT++ +I A +GK+ +A L+ +M
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 354
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 141/293 (48%), Gaps = 16/293 (5%)
Query: 79 AKELFLKMKDENIN--PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
AK LF+ + I P V ++ +L C+ + A + E ++
Sbjct: 9 AKRLFVHWNLQGIGNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------IL 54
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
N L K+D+A L M++ P+ +N L+ + L M+++G
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
H++++YSI IN +C+ ++ AL++ ++M+ G +PD+V ++L G ++ A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L D+M G DT+ + T I GL + EAV L + + D+ Y +++GLC
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
K G + +A L + + +G + ADVV YN +I LC MD A +LF +M+ K
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNK 287
Score = 114 bits (284), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 110/236 (46%), Gaps = 29/236 (12%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMAN----GN-------- 49
EA +F + C PNV TY+TLI G C+ + LF EM+ GN
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 50 -GEF----------------GVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
G F V PN +TY ++DGLCK G + KA +F ++ +
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 93 PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
P++ TYN +I G C A + LF + +GV PNV+++N +++ C+ G +EA L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILIN 208
L+ M + G PN+ YNTL+ G + EL M S G + + ++ N
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
Score = 74.7 bits (182), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 79/176 (44%), Gaps = 30/176 (17%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGV-------- 54
A +F ++ G PN+ TYN L++GLC+ G A+ +FE + E +
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511
Query: 55 -VCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
+CK PN + Y T+I G C++G ++A L KMK++ P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 94 NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
N TYN+LI D + L EM G + + ++ N L +G++D++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/366 (37%), Positives = 214/366 (58%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A L ++ G +PN TY ++ +C++G T +A+ L +M K + V
Sbjct: 195 DAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK------IKLDAV 248
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y+ IIDGLCK+G +D A LF +M+ + +++ Y +LI GFCYA W++ L +M
Sbjct: 249 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + P+VV+F+ +++ K GK+ EA L + MIQ G+ P+ Y +L+DGFC ++
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
++A + M S GC N+ +++ILINGYCK I+ L L+ +M +G+ D V YNTL
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G E+ ++E A +LF EM V D +Y+ +DGLC NG +A+E+F + K
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
ELDI YN +I G+C + ++ AW+LF SLP + DV TYNIMI LC G + +A
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 362 LFLDME 367
LF ME
Sbjct: 549 LFRKME 554
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 112/361 (31%), Positives = 194/361 (53%), Gaps = 6/361 (1%)
Query: 9 KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
++ + G N++T + +IN CR +A + ++ E P+TVT++T+I+
Sbjct: 97 QMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYE------PDTVTFSTLIN 150
Query: 69 GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
GLC EG V +A EL +M + P ++T N+L++G C ++A L M++ G QP
Sbjct: 151 GLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQP 210
Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
N V++ ++ +CK+G+ A LL M + ++ +A Y+ ++DG C G ++ A LF
Sbjct: 211 NEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLF 270
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
ME G K ++ Y+ LI G+C + L +M+ + I PDVV ++ L +
Sbjct: 271 NEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKE 330
Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
++ A +L EM + G++ DT Y + IDG CK + +A + + +IR +
Sbjct: 331 GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTF 390
Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
N LI+G CK+ + ELFR + ++AD VTYN +I C GK++ A++LF +M +
Sbjct: 391 NILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVS 450
Query: 369 K 369
+
Sbjct: 451 R 451
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 162/309 (52%), Gaps = 7/309 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P+V ++ LI+ + G A L +EM + G+ P+TVTYT++IDG CKE +
Sbjct: 315 PDVVAFSALIDCFVKEGKLREAEELHKEMI----QRGI--SPDTVTYTSLIDGFCKENQL 368
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
DKA + M + PN+ T+N LI+G+C AN ++ LF +M +GV + V++N +
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+ C+ GK++ A L + M+ VRP+ Y L+DG C G +A E+F +E
Sbjct: 429 IQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKM 488
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ ++ Y+I+I+G C +++ A L+ + KG+KPDV YN + GL + + A
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
LF +M+ G + + Y I G ++ +L ++ + +D ++D L
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML- 607
Query: 317 KSGRLKIAW 325
GRLK ++
Sbjct: 608 SDGRLKKSF 616
Score = 152 bits (383), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 168/332 (50%), Gaps = 6/332 (1%)
Query: 38 ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
A++LF+EM +P + ++ + + + D +L +M+ + I N+ T
Sbjct: 56 AVDLFQEMTRSRP------RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYT 109
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
+ +I+ C + A +++ G +P+ V+F+ ++N LC G++ EA L++ M+
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G +P N L++G CL G+V+ A L M G + N +Y ++ CK+ +
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A+ L +M + IK D V Y+ + GL + ++ AF LF+EM+ G AD Y T I
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
G C G + +L R + K D+ A++ LID K G+L+ A EL + + + +
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
D VTY +I C + ++DKA + M +K
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Score = 145 bits (365), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 146/290 (50%)
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D A +LF +M P ++ ++ L ++ L +M +G+ N+ + +++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+N C+ K+ A + +I++G P+ ++TL++G CL GRV+ A EL M MG
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
K + + + L+NG C N ++ A+ L M+ G +P+ V Y + + + Q A +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M+ + D Y IDGLCK+G + A LF + I ++ DI Y LI G C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
+GR +L R + + + DVV ++ +I +GK+ +A +L +M
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Score = 112 bits (279), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 113/225 (50%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
K D+A L + M + RP ++ L T + + +L ME G HN+++ S
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I+IN C+ +++ A S +++ G +PD V ++TL GL +V A +L D M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G ++GLC NG + +AV L + ++ + Y ++ +CKSG+ +A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
EL R + + D V Y+I+I LC DG +D A +LF +ME K
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Score = 32.3 bits (72), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA LF K+ G PN TYN LI G + L EE+ F V +
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCG--FSVDASTVKM 602
Query: 62 TYTTIIDGLCKEGFVD 77
+ DG K+ F+D
Sbjct: 603 VVDMLSDGRLKKSFLD 618
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 269 bits (688), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 131/365 (35%), Positives = 217/365 (59%), Gaps = 6/365 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A ++ K+ G EP+ T +L+NG CR A++L ++M E G KP+ V
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV----EIGY--KPDIVA 192
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y IID LCK V+ A + F +++ + I PNVVTY +L++G C ++ W++A L +M+
Sbjct: 193 YNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMI 252
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ + PNV++++ +++ KNGK+ EA L E M+++ + P+ Y++L++G CL R++
Sbjct: 253 KKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A ++F M S GC +V SY+ LING+CK K +E + L+ EM +G+ + V YNTL
Sbjct: 313 EANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLI 372
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G F+ V++A + F +M G++ D W Y + GLC NG + +A+ +F ++ + +
Sbjct: 373 QGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMD 432
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
LDI Y +I G+CK+G+++ AW LF SL L D+VTY M+ LC G + + L
Sbjct: 433 LDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEAL 492
Query: 363 FLDME 367
+ M+
Sbjct: 493 YTKMK 497
Score = 205 bits (521), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/332 (32%), Positives = 180/332 (54%), Gaps = 6/332 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A +L K+ G +P++ YN +I+ LC+T A + F+E+ +PN V
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKG------IRPNVV 226
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TYT +++GLC A L M + I PNV+TY++L+ F EAK LF EM
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + P++V+++ ++N LC + ++DEA+++ +LM+ G + YNTL++GFC RV
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+LF M G N +Y+ LI G+ + +++ A +S+M GI PD+ YN L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GL + ++E+A +F++MQ+ + D Y T I G+CK G + EA LF +L +
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
+ DI Y ++ GLC G L L+ + +
Sbjct: 467 KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Score = 177 bits (450), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/330 (30%), Positives = 175/330 (53%), Gaps = 6/330 (1%)
Query: 38 ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
A++LF +M P+ V + ++ + K D L KM+ I ++ T
Sbjct: 69 AIDLFSDMVKSRPF------PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYT 122
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
+N +I+ FC + A + +M+ G +P+ V+ ++N C+ ++ +A L++ M+
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+IG +P+ YN ++D C T RVN A + F +E G + NV +Y+ L+NG C +
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A L S+M+ K I P+V+ Y+ L + +V A +LF+EM R + D Y + I
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
+GLC + I EA ++F + D+ +YN LI+G CK+ R++ +LFR + + L+
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDME 367
++ VTYN +I G +DKA++ F M+
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Score = 148 bits (373), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 151/294 (51%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
++ A +LF M P++V +N L+ ++ L +M G++ ++ +FN+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C ++ A +L M+++G P+ +L++GFC RV+ A L M +G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
K ++ +Y+ +I+ CK K + A + E+ KGI+P+VV Y L GL + A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
+L +M + + + Y +D KNG ++EA ELF + + + DI Y+ LI+GL
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
C R+ A ++F + +ADVV+YN +I+ C +++ LF +M +
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 129/231 (55%), Gaps = 6/231 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA LF ++ +P++ TY++LINGLC A +F+ M + C +
Sbjct: 277 LEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG------CLADV 330
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
V+Y T+I+G CK V+ +LF +M + N VTYN+LI GF A D ++A+ F +
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M G+ P++ ++N+++ LC NG++++A + E M + + + Y T++ G C TG+
Sbjct: 391 MDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGK 450
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
V A LF S+ G K ++ +Y+ +++G C + +LY++M +G+
Sbjct: 451 VEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 114/222 (51%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
K+++A L M++ P+ +N L+ + + L ME +G ++++++++
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I+IN +C ++ ALS+ +ML G +PD V +L G ++V A L D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G D AY ID LCK + +A + F+ + ++ Y L++GLC S R A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
L + + + +V+TY+ ++ A +GK+ +A++LF +M
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%)
Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
++N A +LF M ++ ++ L++ K K+ + +SL +M GI+ D+ +N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
+ QV A + +M + G D + ++G C+ + +AV L + +
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
Y+ DI AYN +ID LCK+ R+ A++ F+ + R + +VVTY +++ LC + A
Sbjct: 185 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 244
Query: 360 RDLFLDMEAK 369
L DM K
Sbjct: 245 ARLLSDMIKK 254
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 268 bits (684), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 137/366 (37%), Positives = 216/366 (59%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L ++ +G +P+ TY ++N LC++G++ +AL+LF +M N K + V
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERN------IKASVV 246
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y+ +ID LCK+G D A LF +M+ + I +VVTY+SLI G C W++ + EM
Sbjct: 247 QYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + P+VV+F+ +++ K GK+ EA L MI G+ P+ YN+L+DGFC +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A ++F M S GC+ ++ +YSILIN YCK K ++ + L+ E+ SKG+ P+ + YNTL
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTL 426
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
+G + ++ A +LF EM GV Y +DGLC NG + +A+E+F ++ +
Sbjct: 427 VLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRM 486
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
L I YN +I G+C + ++ AW LF SL + DVVTYN+MI LC G + +A
Sbjct: 487 TLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADM 546
Query: 362 LFLDME 367
LF M+
Sbjct: 547 LFRKMK 552
Score = 198 bits (503), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 190/356 (53%), Gaps = 6/356 (1%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G E +++T +IN CR + A ++ + + +P+T+T++T+++G C E
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGR------AWKLGYEPDTITFSTLVNGFCLE 153
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
G V +A L +M + P++VT ++LI+G C +EA L M++ G QP+ V++
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
++N LCK+G A L M + ++ + Y+ ++D C G + A LF ME
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
G K +V +YS LI G C + + + + EM+ + I PDVV ++ L + ++
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
A +L++EM G+A DT Y + IDG CK + EA ++F + E DI Y+ LI+
Sbjct: 334 AKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILIN 393
Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
CK+ R+ LFR + LI + +TYN ++ C GK++ A++LF +M ++
Sbjct: 394 SYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR 449
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/349 (31%), Positives = 176/349 (50%), Gaps = 41/349 (11%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A +LF ++ + G + +V TY++LI GLC G + EM N P+ V
Sbjct: 263 DALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRN------IIPDVV 316
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T++ +ID KEG + +AKEL+ +M I P+ +TYNSLI GFC N +EA +F M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ +G +P++V++++++N CK ++D+ RL + G+ PN YNTL+ GFC +G++
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL--------------------- 220
N A+ELF M S G +V +Y IL++G C N E+ AL
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496
Query: 221 --------------SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
SL+ + KG+KPDVV YN + GL + + A LF +M+ G
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
D + Y I ++ +VEL +++ + D +ID L
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 167 bits (424), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 152/280 (54%), Gaps = 6/280 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L+ ++ G P+ TYN+LI+G C+ A +F+ M + C+P+
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG------CEPDI 385
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY+ +I+ CK VD LF ++ + + PN +TYN+L+ GFC + N AK LF E
Sbjct: 386 VTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQE 445
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ +GV P+VV++ ++++ LC NG++++A + E M + + +YN ++ G C +
Sbjct: 446 MVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASK 505
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V+ A LF S+ G K +V +Y+++I G CK + A L+ +M G PD YN
Sbjct: 506 VDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNI 565
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
L + + +L +EM+ G +AD+ + ID L
Sbjct: 566 LIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 125/260 (48%), Gaps = 8/260 (3%)
Query: 118 FIEMMDQGVQ----PNVVSFNVIMNELCKNG----KMDEASRLLELMIQIGVRPNAFVYN 169
F +++++G ++ + E +NG K+++A L E MIQ P +N
Sbjct: 15 FTQILEKGTSLLHYSSITEAKLSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFN 74
Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
L T + + ME G +H++++ +I+IN YC+ K++ A S+
Sbjct: 75 RLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL 134
Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
G +PD + ++TL G +V A L D M D T I+GLC G + EA
Sbjct: 135 GYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEA 194
Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
+ L + ++ D Y +++ LCKSG +A +LFR + + A VV Y+I+I +
Sbjct: 195 LVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 350 LCADGKMDKARDLFLDMEAK 369
LC DG D A LF +ME K
Sbjct: 255 LCKDGSFDDALSLFNEMEMK 274
Score = 111 bits (278), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%)
Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
N+A LF M+ P + FN + + + + + D + M G+ + + +
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ +C ++ A + +G + + ++S L+NG+C + A++L M+
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQ 171
Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
+PD+V +TL GL +V A L D M +G D Y ++ LCK+G A++
Sbjct: 172 RPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD 231
Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
LFR + + + Y+ +ID LCK G A LF + + ADVVTY+ +I LC
Sbjct: 232 LFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLC 291
Query: 352 ADGKMDKARDLFLDM 366
DGK D + +M
Sbjct: 292 NDGKWDDGAKMLREM 306
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 258 bits (658), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/354 (37%), Positives = 202/354 (57%), Gaps = 6/354 (1%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G P+ + ++ LI + G A+ +F +M PN VTY +I LCK
Sbjct: 366 GIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQG------LNPNAVTYGAVIGILCKS 419
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
G V+ A F +M DE ++P + YNSLIHG C N W A+ L +EM+D+G+ N + F
Sbjct: 420 GRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFF 479
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
N I++ CK G++ E+ +L ELM++IGV+PN YNTL++G+CL G+++ A +L M S
Sbjct: 480 NSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS 539
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
+G K N +YS LINGYCK +E AL L+ EM S G+ PD++ YN + GLF+ +
Sbjct: 540 VGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 599
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
A +L+ + G + Y + GLCKN +A+++F+ L ++ +L+ R +N +ID
Sbjct: 600 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMID 659
Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
L K GR A +LF + L+ + TY +M + G +++ LFL ME
Sbjct: 660 ALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSME 713
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/431 (29%), Positives = 211/431 (48%), Gaps = 73/431 (16%)
Query: 9 KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
++ GC PNVF+YN L+ GLC + AL L MA+ G P+ V+YTT+I+
Sbjct: 148 RMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGS---PPDVVSYTTVIN 204
Query: 69 GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI-------------------------- 102
G KEG DKA + +M D I P+VVTYNS+I
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 103 ---------HGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR-- 151
HG+C + EA +M GV+P+VV+++++M+ LCKNG+ EA +
Sbjct: 265 DCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIF 324
Query: 152 ---------------------------------LLELMIQIGVRPNAFVYNTLMDGFCLT 178
LL+LM++ G+ P+ +V++ L+ +
Sbjct: 325 DSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQ 384
Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
G+V++A +F M G N +Y +I CK+ +E A+ + +M+ +G+ P ++Y
Sbjct: 385 GKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVY 444
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
N+L GL ++ ERA +L EM G+ +T + + ID CK G ++E+ +LF +
Sbjct: 445 NSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVR 504
Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ + ++ YN LI+G C +G++ A +L + L + VTY+ +I+ C +M+
Sbjct: 505 IGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Query: 359 ARDLFLDMEAK 369
A LF +ME+
Sbjct: 565 ALVLFKEMESS 575
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/365 (30%), Positives = 186/365 (50%), Gaps = 6/365 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA K+R G EP+V TY+ L++ LC+ G + A +F+ M KP
Sbjct: 284 EAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRG------LKPEIT 337
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T++ G +G + + L M I+P+ ++ LI + ++A +F +M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
QG+ PN V++ ++ LCK+G++++A E MI G+ P VYN+L+ G C +
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
RAEEL + M G N ++ +I+ +CK + + L+ M+ G+KP+V+ YNTL
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G +++ A KL M G+ +T Y T I+G CK + +A+ LF+ +
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
DI YN ++ GL ++ R A EL+ + ++ TYNI++H LC + D A
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637
Query: 362 LFLDM 366
+F ++
Sbjct: 638 MFQNL 642
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 173/352 (49%), Gaps = 29/352 (8%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVV------ 55
+A +F K+R G PN TY +I LC++G A+ FE+M + G +
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLI 448
Query: 56 -----CKP------------------NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
C NT+ + +IID CKEG V ++++LF M +
Sbjct: 449 HGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVK 508
Query: 93 PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
PNV+TYN+LI+G+C A +EA L M+ G++PN V+++ ++N CK +M++A L
Sbjct: 509 PNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVL 568
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
+ M GV P+ YN ++ G T R A+EL+V + G + + +Y+I+++G CK
Sbjct: 569 FKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCK 628
Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
NK + AL ++ + +K + +N + L ++ + + A LF +G+ + W
Sbjct: 629 NKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWT 688
Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
YR + + G + E +LF ++ +D N ++ L + G + A
Sbjct: 689 YRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA 740
Score = 135 bits (341), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 141/285 (49%), Gaps = 6/285 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+E+ LF + G +PNV TYNTLING C G A+ L M + V KPNT
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVS------VGLKPNT 546
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY+T+I+G CK ++ A LF +M+ ++P+++TYN ++ G AK L++
Sbjct: 547 VTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVR 606
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+ + G Q + ++N+I++ LCKN D+A ++ + + + ++ A +N ++D GR
Sbjct: 607 ITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTFNIMIDALLKVGR 666
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ A++LFV+ S G N ++Y ++ +E L+ M G D + N
Sbjct: 667 NDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNF 726
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
+ L + ++ RA + + + FID L Y
Sbjct: 727 IVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGKY 771
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 167/372 (44%), Gaps = 8/372 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A +F +L G +++ N + + R A++ + MA + P+
Sbjct: 33 DARHVFDELLRRGRGASIYGLNRALADVARDSPA-AAVSRYNRMARAGAD---EVTPDLC 88
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +I C+ G +D + + + + + L+ G C ++A + +
Sbjct: 89 TYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRR 148
Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFCL 177
M + G PNV S+N+++ LC + EA LL +M G P+ Y T+++GF
Sbjct: 149 MTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFK 208
Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
G ++A + M G +V +Y+ +I CK + ++ A+ + + M+ G+ PD +
Sbjct: 209 EGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMT 268
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
YN++ G Q + A +M+ GV D Y +D LCKNG +EA ++F ++
Sbjct: 269 YNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328
Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
+ +I Y L+ G G L L + R + D ++I+I A GK+D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388
Query: 358 KARDLFLDMEAK 369
+A +F M +
Sbjct: 389 QAMLVFSKMRQQ 400
Score = 124 bits (312), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 148/315 (46%), Gaps = 10/315 (3%)
Query: 18 NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
N +N++I+ C+ G I + LFE M GV KPN +TY T+I+G C G +D
Sbjct: 475 NTIFFNSIIDSHCKEGRVIESEKLFELMV----RIGV--KPNVITYNTLINGYCLAGKMD 528
Query: 78 KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
+A +L M + PN VTY++LI+G+C + +A LF EM GV P+++++N+I+
Sbjct: 529 EAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIIL 588
Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
L + + A L + + G + YN ++ G C + A ++F ++ M K
Sbjct: 589 QGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLK 648
Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
+++I+I+ K + A L+ S G+ P+ Y + + +E +L
Sbjct: 649 LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQL 708
Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
F M+ +G D+ + L + G I A + + L+ + ID L
Sbjct: 709 FLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFID-LLS 767
Query: 318 SGRLKIAWELFRSLP 332
G+ + E +R LP
Sbjct: 768 GGKYQ---EYYRFLP 779
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 254 bits (649), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 212/365 (58%), Gaps = 9/365 (2%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A ++ K+ FG EP+V T ++LING C+ A++L +M E G +P+ V
Sbjct: 123 ALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME----EMGF--RPDVVI 176
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y TIIDG CK G V+ A ELF +M+ + + + VTYNSL+ G C + W++A L +M+
Sbjct: 177 YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMV 236
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ + PNV++F +++ K GK EA +L E M + V P+ F YN+L++G C+ GRV+
Sbjct: 237 MRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVD 296
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A+++ M + GC +V +Y+ LING+CK+K ++ L+ EM +G+ D + YNT+
Sbjct: 297 EAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTII 356
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G F+ + + A ++F M + Y + GLC N + +A+ LF ++ + E
Sbjct: 357 QGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIE 413
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
LDI YN +I G+CK G ++ AW+LFRSL L DVV+Y MI C + DK+ L
Sbjct: 414 LDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLL 473
Query: 363 FLDME 367
+ M+
Sbjct: 474 YRKMQ 478
Score = 211 bits (536), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 202/365 (55%), Gaps = 9/365 (2%)
Query: 5 ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
+LF + V G ++++YN +IN LCR ++AL++ +M +FG +P+ VT +
Sbjct: 90 SLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM----KFGY--EPDVVTVS 143
Query: 65 TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
++I+G C+ V A +L KM++ P+VV YN++I G C N+A LF M
Sbjct: 144 SLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERD 203
Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
GV+ + V++N ++ LC +G+ +A+RL+ M+ + PN + ++D F G+ + A
Sbjct: 204 GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEA 263
Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
+L+ M +VF+Y+ LING C + ++ A + M++KG PDVV YNTL G
Sbjct: 264 MKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLING 323
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
+ +V+ KLF EM + G+ DT Y T I G + G A E+F + +
Sbjct: 324 FCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPN 380
Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
IR Y+ L+ GLC + R++ A LF ++ + + D+ TYNI+IH +C G ++ A DLF
Sbjct: 381 IRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFR 440
Query: 365 DMEAK 369
+ K
Sbjct: 441 SLSCK 445
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 167/312 (53%)
Query: 58 PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
P+ V ++ ++ + K D LF M+ I ++ +YN +I+ C + + A +
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126
Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
+MM G +P+VV+ + ++N C+ ++ +A L+ M ++G RP+ +YNT++DG C
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186
Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
G VN A ELF ME G + + +Y+ L+ G C + A L +M+ + I P+V+
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
+ + + + A KL++EM R V D + Y + I+GLC +G + EA ++ +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
D+ YN LI+G CKS R+ +LFR + + L+ D +TYN +I G+ D
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 358 KARDLFLDMEAK 369
A+++F M+++
Sbjct: 367 AAQEIFSRMDSR 378
Score = 157 bits (397), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/300 (31%), Positives = 151/300 (50%), Gaps = 44/300 (14%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A LF ++ G + TYN+L+ GLC +G A L +M + PN +
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD------IVPNVI 245
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T+T +ID KEG +A +L+ +M ++P+V TYNSLI+G C +EAK + M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ +G P+VV++N ++N CK+ ++DE ++L M Q G+ + YNT++ G+ GR
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLS------------- 228
+ A+E+F M+S + N+ +YSIL+ G C N +E AL L+ M
Sbjct: 366 DAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 229 ----------------------KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
KG+KPDVV Y T+ G Q +++ L+ +MQ G+
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGL 482
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 147/289 (50%)
Query: 81 ELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNEL 140
+LF KM P++V ++ ++ + +++ LF M G+ ++ S+N+++N L
Sbjct: 55 DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114
Query: 141 CKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNV 200
C+ + A ++ M++ G P+ ++L++GFC RV A +L ME MG + +V
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174
Query: 201 FSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
Y+ +I+G CK + A+ L+ M G++ D V YN+L GL + A +L +
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRD 234
Query: 261 MQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGR 320
M + + + ID K G EA++L+ + + D+ YN LI+GLC GR
Sbjct: 235 MVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGR 294
Query: 321 LKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ A ++ + + DVVTYN +I+ C ++D+ LF +M +
Sbjct: 295 VDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 143/283 (50%), Gaps = 5/283 (1%)
Query: 92 NPNVVTYNSLIHGFCYAN-----DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
NP +V + S G ++ + E LF +M+ P++V F+ +++++ K+
Sbjct: 26 NPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNY 85
Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
D L M G+ + + YN +++ C R A + M G + +V + S L
Sbjct: 86 DLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL 145
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
ING+C+ + A+ L S+M G +PDVVIYNT+ G +I V A +LFD M+R GV
Sbjct: 146 INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGV 205
Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
AD Y + + GLC +G +A L R + + ++ + +ID K G+ A +
Sbjct: 206 RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMK 265
Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L+ + R + DV TYN +I+ LC G++D+A+ + M K
Sbjct: 266 LYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTK 308
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 128/232 (55%), Gaps = 9/232 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L+ ++ +P+VFTYN+LINGLC G A + + M C P+ V
Sbjct: 262 EAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG------CLPDVV 315
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T+I+G CK VD+ +LF +M + + +TYN++I G+ A + A+ +F M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+PN+ ++++++ LC N ++++A L E M + + + YN ++ G C G V
Sbjct: 376 ---DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
A +LF S+ G K +V SY+ +I+G+C+ ++ + + LY +M G+ P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 250 bits (638), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/367 (36%), Positives = 210/367 (57%), Gaps = 10/367 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EAAAL K+ G +V TY T++NG+C+ G T ALNL +M + KP+
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH------IKPDV 296
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
V Y+ IID LCK+G A+ LF +M ++ I PNV TYN +I GFC W++A+ L +
Sbjct: 297 VIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRD 356
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+++ + P+V++FN +++ K GK+ EA +L + M+ + P+ YN+++ GFC R
Sbjct: 357 MIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNR 416
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ A+ +F M S +V +++ +I+ YC+ K ++ + L E+ +G+ + YNT
Sbjct: 417 FDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNT 472
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L G E+ + A LF EM HGV DT + G C+N + EA+ELF +++ K
Sbjct: 473 LIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSK 532
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
+LD AYN +I G+CK ++ AW+LF SLP + DV TYN+MI C + A
Sbjct: 533 IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 361 DLFLDME 367
LF M+
Sbjct: 593 VLFHKMK 599
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/365 (33%), Positives = 190/365 (52%), Gaps = 14/365 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A LF ++ G PNVFTYN +I+G C G A L +M P+ +
Sbjct: 314 DAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE------INPDVL 367
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T+ +I KEG + +A++L +M I P+ VTYNS+I+GFC N +++AK +F
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF--- 424
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D P+VV+FN I++ C+ ++DE +LL + + G+ N YNTL+ GFC +
Sbjct: 425 -DLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
N A++LF M S G + + +IL+ G+C+N+++E AL L+ + I D V YN +
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNII 543
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G+ + +V+ A+ LF + HGV D Y I G C I +A LF ++ +
Sbjct: 544 IHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGH 603
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
E D YN LI G K+G + + EL + D T M+ L DG++DK+
Sbjct: 604 EPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS-- 660
Query: 362 LFLDM 366
F DM
Sbjct: 661 -FSDM 664
Score = 159 bits (402), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 98/302 (32%), Positives = 149/302 (49%), Gaps = 15/302 (4%)
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D A L+ KM+ I N+ ++N LI FC + + + F ++ G QP+VV+FN +
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 137 MNELCKNGKMDEA---------------SRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++ LC ++ EA L + M++IG+ P +NTL++G CL GRV
Sbjct: 183 LHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRV 242
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A L M G +V +Y ++NG CK + + AL+L S+M IKPDVVIY+ +
Sbjct: 243 LEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAI 302
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
L + A LF EM G+A + + Y IDG C G +A L R + +
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREI 362
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
D+ +N LI K G+L A +L + + D VTYN MI+ C + D A+
Sbjct: 363 NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKH 422
Query: 362 LF 363
+F
Sbjct: 423 MF 424
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 174/394 (44%), Gaps = 60/394 (15%)
Query: 23 NTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKEL 82
N +I R VA++L+ +M N ++ +I C + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPL------NIYSFNILIKCFCDCHKLSFSLST 163
Query: 83 FLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF-----------IEMMDQ----GVQ 127
F K+ P+VVT+N+L+HG C + +EA LF + + DQ G+
Sbjct: 164 FGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT 223
Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
P V++FN ++N LC G++ EA+ L+ M+ G+ + Y T+++G C G A L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
ME K +V YS +I+ CK+ A L+SEML KGI P+V YN + G
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 248 IHQ-----------VER------------------------AFKLFDEMQRHGVAADTWA 272
+ +ER A KL DEM + DT
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
Y + I G CK+ +A +F L D+ +N +ID C++ R+ +L R +
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFD----LMASPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459
Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
R L+A+ TYN +IH C ++ A+DLF +M
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 15/240 (6%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
+D+A + M++ A N ++ F R + A L+ ME N++S++
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFN 145
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF------ 258
ILI +C ++ +LS + ++ G +PDVV +NTL GL ++ A LF
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 259 ---------DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
D+M G+ + T I+GLC G ++EA L + +D+ Y
Sbjct: 206 GFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+++G+CK G K A L + + DVV Y+ +I LC DG A+ LF +M K
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 244 bits (624), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 126/366 (34%), Positives = 207/366 (56%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
A+ K+ G EP++ T+ +L+NG C A+ LF+++ G+ KPN V
Sbjct: 136 RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI------LGMGFKPNVV 189
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TYTT+I LCK ++ A ELF +M PNVVTYN+L+ G C W +A L +M
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
M + ++PNV++F +++ K GK+ EA L +MIQ+ V P+ F Y +L++G C+ G +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A ++F ME GC N Y+ LI+G+CK+K +E + ++ EM KG+ + + Y L
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVL 369
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + + + A ++F++M D Y +DGLC NG + +A+ +F +R +
Sbjct: 370 IQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREM 429
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+++I Y +I G+CK G+++ A++LF SL + +V+TY MI C G + +A
Sbjct: 430 DINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADS 489
Query: 362 LFLDME 367
LF M+
Sbjct: 490 LFKKMK 495
Score = 202 bits (514), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 119/365 (32%), Positives = 193/365 (52%), Gaps = 6/365 (1%)
Query: 5 ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
+LF ++++ G P + T N +++ +C + A +M E P+ VT+T
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFE------PDLVTFT 157
Query: 65 TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
++++G C ++ A LF ++ PNVVTY +LI C N A LF +M
Sbjct: 158 SLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTN 217
Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G +PNVV++N ++ LC+ G+ +A+ LL M++ + PN + L+D F G++ A
Sbjct: 218 GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEA 277
Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
+EL+ M M +VF+Y LING C ++ A ++ M G P+ VIY TL G
Sbjct: 278 KELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHG 337
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
+ +VE K+F EM + GV A+T Y I G C G A E+F + + D
Sbjct: 338 FCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPD 397
Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
IR YN L+DGLC +G+++ A +F + + + ++VTY I+I +C GK++ A DLF
Sbjct: 398 IRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFC 457
Query: 365 DMEAK 369
+ +K
Sbjct: 458 SLFSK 462
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 170/332 (51%), Gaps = 6/332 (1%)
Query: 38 ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
AL+LF M + P+ + +T ++ + K D LF +M+ I P + T
Sbjct: 67 ALDLFTRMVHSRP------LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT 120
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
N ++H C ++ A C +MM G +P++V+F ++N C ++++A L + ++
Sbjct: 121 CNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+G +PN Y TL+ C +N A ELF M + G + NV +Y+ L+ G C+
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A L +M+ + I+P+V+ + L ++ ++ A +L++ M + V D + Y + I
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
+GLC G + EA ++F + + Y LI G CKS R++ ++F + + ++
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVV 360
Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
A+ +TY ++I C G+ D A+++F M ++
Sbjct: 361 ANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 140/302 (46%), Gaps = 29/302 (9%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
A LF ++ G PNV TYN L+ GLC G A L +M E V+
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 57 ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
P+ TY ++I+GLC G +D+A+++F M+
Sbjct: 266 DAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCY 325
Query: 93 PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
PN V Y +LIHGFC + + +F EM +GV N +++ V++ C G+ D A +
Sbjct: 326 PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
M P+ YN L+DG C G+V +A +F M N+ +Y+I+I G CK
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
++E A L+ + SKG+KP+V+ Y T+ G + A LF +M+ G +
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESV 505
Query: 273 YR 274
Y+
Sbjct: 506 YK 507
Score = 146 bits (369), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 6/238 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
MEA L+ + P+VFTY +LINGLC G A +F M NG C PN
Sbjct: 275 MEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMER-NG-----CYPNE 328
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
V YTT+I G CK V+ ++F +M + + N +TY LI G+C + A+ +F +
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M + P++ ++NV+++ LC NGK+++A + E M + + N Y ++ G C G+
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
V A +LF S+ S G K NV +Y+ +I+G+C+ I A SL+ +M G P+ +Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 138/271 (50%)
Query: 97 TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
+Y ++ + +N+A LF M+ P+++ F +++ + K + D L E M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
+G+ P N +M CL+ + RA M +G + ++ +++ L+NGYC I
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRI 169
Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
E A++L+ ++L G KP+VV Y TL L + + A +LF++M +G + Y
Sbjct: 170 EDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNAL 229
Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
+ GLC+ G +A L R + + E ++ + LID K G+L A EL+ + + +
Sbjct: 230 VTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDME 367
DV TY +I+ LC G +D+AR +F ME
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFYLME 320
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 241 bits (615), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 193/327 (59%), Gaps = 6/327 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ GC+P++ TY ++NGLC+ G T +ALNL +M E N V
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIE------ANVV 254
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y+T+ID LCK D A LF +M+++ + PNV+TY+SLI C W++A L +M
Sbjct: 255 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM 314
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ + PN+V+F+ +++ K GK+ +A +L E MI+ + PN F Y++L++GFC+ R+
Sbjct: 315 IERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRL 374
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A+++ M C NV +Y+ LING+CK K ++ + L+ EM +G+ + V Y TL
Sbjct: 375 GEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTL 434
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G F+ + A +F +M GV + Y +DGLCKNG + +A+ +F L+
Sbjct: 435 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 494
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELF 328
E DI YN +I+G+CK+G+ K+ F
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWKMGGIYF 521
Score = 222 bits (565), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 124/354 (35%), Positives = 194/354 (54%), Gaps = 6/354 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A AL ++ G +P+ T+ TLI+GL A+ L + M C+P+ V
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRG------CQPDLV 219
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +++GLCK G D A L KM+ I NVV Y+++I C ++A LF EM
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++GV+PNV++++ +++ LC G+ +ASRLL MI+ + PN ++ L+D F G++
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+AE+L+ M N+F+YS LING+C + A + M+ K P+VV YNTL
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTL 399
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +V++ +LF EM + G+ +T Y T I G + A +F+ + +
Sbjct: 400 INGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGV 459
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGK 355
+I YN L+DGLCK+G+L A +F L R + D+ TYNIMI +C GK
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 181 bits (460), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 109/358 (30%), Positives = 180/358 (50%), Gaps = 6/358 (1%)
Query: 9 KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
K+ + G N++TYN LIN CR +AL L +M E P+ VT ++++
Sbjct: 103 KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYE------PDIVTLNSLLN 156
Query: 69 GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
G C + A L +M + P+ VT+ +LIHG N +EA L M+ +G QP
Sbjct: 157 GFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP 216
Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
++V++ ++N LCK G D A LL M + N +Y+T++D C + A LF
Sbjct: 217 DLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLF 276
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
ME+ G + NV +YS LI+ C A L S+M+ + I P++V ++ L +
Sbjct: 277 TEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKK 336
Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
++ +A KL++EM + + + + Y + I+G C + EA ++ + ++ Y
Sbjct: 337 GKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
N LI+G CK+ R+ ELFR + + L+ + VTY +IH D A+ +F M
Sbjct: 397 NTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Score = 166 bits (421), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 185/353 (52%), Gaps = 6/353 (1%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P++ ++ L++ + + + ++ E+M G+ N TY +I+ C+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKME----ILGI--SHNLYTYNILINCFCRCSRL 129
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
A L KM P++VT NSL++GFC+ N ++A L +M++ G +P+ V+F +
Sbjct: 130 SLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTL 189
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ L + K EA L++ M+Q G +P+ Y +++G C G + A L ME+
Sbjct: 190 IHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKI 249
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+ NV YS +I+ CK + + AL+L++EM +KG++P+V+ Y++L L + A +
Sbjct: 250 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASR 309
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
L +M + + + ID K G +V+A +L+ + + +I Y+ LI+G C
Sbjct: 310 LLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFC 369
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
RL A ++ + R + +VVTYN +I+ C ++DK +LF +M +
Sbjct: 370 MLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQR 422
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 110/190 (57%), Gaps = 6/190 (3%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
++A L+ ++ +PN+FTY++LING C A + E M + C PN
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD------CLPNV 393
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+I+G CK VDK ELF +M + N VTY +LIHGF A D + A+ +F +
Sbjct: 394 VTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 453
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ GV PN++++N++++ LCKNGK+ +A + E + + + P+ + YN +++G C G+
Sbjct: 454 MVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Query: 181 VNRAEELFVS 190
FV+
Sbjct: 514 WKMGGIYFVA 523
Score = 121 bits (304), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 126/257 (49%)
Query: 110 DWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYN 169
+ ++A LF M P+++ F+ +++ + K K D E M +G+ N + YN
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 170 TLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK 229
L++ FC R++ A L M +G + ++ + + L+NG+C I A++L +M+
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 230 GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
G KPD V + TL GLF ++ A L D M + G D Y ++GLCK G A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 290 VELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHA 349
+ L + K E ++ Y+ +ID LCK A LF + + +V+TY+ +I
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297
Query: 350 LCADGKMDKARDLFLDM 366
LC G+ A L DM
Sbjct: 298 LCNYGRWSDASRLLSDM 314
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 145/291 (49%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+D A LF M P+++ ++ L+ N ++ +M G+ N+ ++N+
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNI 118
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C+ ++ A LL M+++G P+ N+L++GFC R++ A L M MG
Sbjct: 119 LINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMG 178
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
K + +++ LI+G + + A++L M+ +G +PD+V Y + GL + + A
Sbjct: 179 YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL 238
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L ++M+ + A+ Y T ID LCK + +A+ LF + ++ Y+ LI L
Sbjct: 239 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C GR A L + + ++VT++ +I A GK+ KA L+ +M
Sbjct: 299 CNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEM 349
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 112/225 (49%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
++D+A L +M Q P+ ++ L+ + + ME +G HN+++Y+
Sbjct: 58 ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
ILIN +C+ + AL+L +M+ G +PD+V N+L G +++ A L D+M
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G DT + T I GL + EAV L + + D+ Y +++GLCK G +A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L + + A+VV Y+ +I +LC D A +LF +ME K
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 196 CKHNVFS------YSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
C+ FS Y ++ + E++ A+ L+ M P ++ ++ L + +++
Sbjct: 33 CRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMN 92
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
+ + ++M+ G++ + + Y I+ C+ + A+ L + L YE DI N
Sbjct: 93 KFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLN 152
Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
L++G C R+ A L + D VT+ +IH L K +A
Sbjct: 153 SLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/365 (36%), Positives = 204/365 (55%), Gaps = 6/365 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A + K+ G EP++ T+ +L+NG CR AL +F++M G+ KPN V
Sbjct: 135 ALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMV------GMGYKPNVVI 188
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y TIIDGLCK VD A +L +M+ + I P+VVTYNSLI G C + W++A + M
Sbjct: 189 YNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMT 248
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ + P+V +FN +++ K G++ EA E MI+ + P+ Y+ L+ G C+ R++
Sbjct: 249 KREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLD 308
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
AEE+F M S GC +V +YSILINGYCK+K++E + L+ EM +G+ + V Y L
Sbjct: 309 EAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILI 368
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G ++ A ++F M GV + Y + GLC NG I +A+ + ++ +
Sbjct: 369 QGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMD 428
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
DI YN +I G+CK+G + AW+++ SL L+ D+ TY M+ L G +A L
Sbjct: 429 ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADAL 488
Query: 363 FLDME 367
F M+
Sbjct: 489 FRKMK 493
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 115/364 (31%), Positives = 195/364 (53%), Gaps = 6/364 (1%)
Query: 6 LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
L+ ++++ G N+ T N L+N CR +AL+ +M E P+ VT+ +
Sbjct: 103 LWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE------PSIVTFGS 156
Query: 66 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
+++G C+ V A +F +M PNVV YN++I G C + + A L M G
Sbjct: 157 LLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
+ P+VV++N +++ LC +G+ +A+R++ M + + P+ F +N L+D GRV+ AE
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
E + M ++ +YS+LI G C ++ A ++ M+SKG PDVV Y+ L G
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
+ +VE KLF EM + GV +T Y I G C+ G + A E+FR + +I
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
YN L+ GLC +G+++ A + + + + AD+VTYNI+I +C G++ A D++
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 366 MEAK 369
+ +
Sbjct: 457 LNCQ 460
Score = 191 bits (485), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 179/331 (54%), Gaps = 8/331 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
+A +F ++ G +PNV YNT+I+GLC++ AL+L M +G G P+
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG-------PDV 221
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY ++I GLC G A + M I P+V T+N+LI +EA+ + E
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ + + P++V++++++ LC ++DEA + M+ G P+ Y+ L++G+C + +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V +LF M G N +Y+ILI GYC+ ++ A ++ M+ G+ P+++ YN
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNV 401
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L GL + ++E+A + +MQ++G+ AD Y I G+CK G + +A +++ +L
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQG 461
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
DI Y ++ GL K G + A LFR +
Sbjct: 462 LMPDIWTYTTMMLGLYKKGLRREADALFRKM 492
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 136/250 (54%), Gaps = 6/250 (2%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P+VFT+N LI+ + G A +EEM + + P+ VTY+ +I GLC +
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD------PDIVTYSLLIYGLCMYSRL 307
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D+A+E+F M + P+VVTY+ LI+G+C + LF EM +GV N V++ ++
Sbjct: 308 DEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+ C+ GK++ A + M+ GV PN YN L+ G C G++ +A + M+ G
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGM 427
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
++ +Y+I+I G CK E+ A +Y + +G+ PD+ Y T+ +GL++ A
Sbjct: 428 DADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADA 487
Query: 257 LFDEMQRHGV 266
LF +M+ G+
Sbjct: 488 LFRKMKEDGI 497
Score = 154 bits (390), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 173/345 (50%), Gaps = 35/345 (10%)
Query: 58 PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
P+ ++ ++ + K D L+ +M+ I N+ T N L++ FC + + A
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
+M+ G +P++V+F ++N C+ ++ +A + + M+ +G +PN +YNT++DG C
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN---------------KEI------ 216
+ +V+ A +L ME G +V +Y+ LI+G C + +EI
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 217 ----------EGALS----LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQ 262
EG +S Y EM+ + + PD+V Y+ L GL +++ A ++F M
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 263 RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
G D Y I+G CK+ + ++LF + + Y LI G C++G+L
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
+A E+FR + + +++TYN+++H LC +GK++KA + DM+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/294 (30%), Positives = 148/294 (50%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+D + +LF M P++ ++ L+ ++ L+ +M G+ N+ + N+
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++N C+ ++ A L MI++G P+ + +L++GFC RV A +F M MG
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
K NV Y+ +I+G CK+K+++ AL L + M GI PDVV YN+L GL + A
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
++ M + + D + + ID K G + EA E + + + DI Y+ LI GL
Sbjct: 242 RMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGL 301
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
C RL A E+F + DVVTY+I+I+ C K++ LF +M +
Sbjct: 302 CMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 124/233 (53%), Gaps = 6/233 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA + ++ +P++ TY+ LI GLC A +F M + C P+ V
Sbjct: 274 EAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG------CFPDVV 327
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY+ +I+G CK V+ +LF +M + N VTY LI G+C A N A+ +F M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM 387
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ GV PN++++NV+++ LC NGK+++A +L M + G+ + YN ++ G C G V
Sbjct: 388 VFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
A +++ S+ G ++++Y+ ++ G K A +L+ +M GI P+
Sbjct: 448 ADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 109 bits (272), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 117/232 (50%), Gaps = 4/232 (1%)
Query: 139 ELCKNG----KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
E+ +NG K+D++ L M+Q P+ ++ L+ + + L+ M+ +
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110
Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
G HN+ + +IL+N +C+ ++ ALS +M+ G +P +V + +L G +V A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
+FD+M G + Y T IDGLCK+ + A++L + D+ YN LI G
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
LC SGR A + + + + DV T+N +I A +G++ +A + + +M
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 75/181 (41%), Gaps = 20/181 (11%)
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIK--------------------PDVVIYNTLFIGLF 246
I G+C ++ S Y EML GI+ P + ++ L +
Sbjct: 33 ICGFCFSRRAYSNGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAIS 92
Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
++ + + L+++MQ G+ + ++ C+ + A+ + L +E I
Sbjct: 93 KMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV 152
Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
+ L++G C+ R+ A +F + +VV YN +I LC ++D A DL M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 367 E 367
E
Sbjct: 213 E 213
>sp|Q9FLL3|PP412_ARATH Pentatricopeptide repeat-containing protein At5g41170,
mitochondrial OS=Arabidopsis thaliana GN=At5g41170 PE=2
SV=1
Length = 527
Score = 238 bits (608), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 221/403 (54%), Gaps = 44/403 (10%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A++ K+ G EP++ T+ +LING C A+++ +M E G+ KP+ V
Sbjct: 126 ASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV----EMGI--KPDVVM 179
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
YTTIID LCK G V+ A LF +M++ I P+VV Y SL++G C + W +A L M
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ ++P+V++FN +++ K GK +A L MI++ + PN F Y +L++GFC+ G V+
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSL-------------------- 222
A ++F ME+ GC +V +Y+ LING+CK K+++ A+ +
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLI 359
Query: 223 ---------------YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH--- 264
+S M+S+G+ P++ YN L L +V++A +F++MQ+
Sbjct: 360 QGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMD 419
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
GVA + W Y + GLC NG + +A+ +F +R + ++ I Y +I G+CK+G++K A
Sbjct: 420 GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNA 479
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
LF SLP + +VVTY MI L +G +A LF M+
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
Score = 164 bits (416), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 171/332 (51%), Gaps = 6/332 (1%)
Query: 38 ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
AL+LF M P+ + +T +++ + K D L ++ ++ ++ T
Sbjct: 56 ALDLFTHMVESRP------LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYT 109
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
N L++ FC ++ A +MM G +P++V+F ++N C +M+EA ++ M+
Sbjct: 110 CNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV 169
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
++G++P+ +Y T++D C G VN A LF ME+ G + +V Y+ L+NG C +
Sbjct: 170 EMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWR 229
Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A SL M + IKPDV+ +N L + + A +L++EM R +A + + Y + I
Sbjct: 230 DADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI 289
Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
+G C G + EA ++F + D+ AY LI+G CK ++ A ++F + + L
Sbjct: 290 NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLT 349
Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ +TY +I GK + A+++F M ++
Sbjct: 350 GNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Score = 161 bits (407), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 150/270 (55%), Gaps = 9/270 (3%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
++A L+ ++ PN+FTY +LING C G A +F M C P+
Sbjct: 264 LDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG------CFPDV 317
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
V YT++I+G CK VD A ++F +M + + N +TY +LI GF N A+ +F
Sbjct: 318 VAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSH 377
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI---GVRPNAFVYNTLMDGFCL 177
M+ +GV PN+ ++NV+++ LC NGK+ +A + E M + GV PN + YN L+ G C
Sbjct: 378 MVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
G++ +A +F M + +Y+I+I G CK +++ A++L+ + SKG+KP+VV
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVA 267
Y T+ GLF A LF +M+ GV+
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 146/272 (53%)
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
Y ++ ++ +NEA LF M++ P+++ F ++N + K K D L + +
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
+GV + + N LM+ FC + + A M +G + ++ +++ LING+C +E
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
A+S+ ++M+ GIKPDVV+Y T+ L + V A LFD+M+ +G+ D Y + +
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 278 DGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLI 337
+GLC +G +A L R + K + D+ +N LID K G+ A EL+ + R +
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 338 ADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
++ TY +I+ C +G +D+AR +F ME K
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 204 SILINGYCKNKEI----------EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
S + +C +EI AL L++ M+ P ++ + L + ++ + +
Sbjct: 31 SFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDV 90
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
L D +Q GV+ D + ++ C++ A + L +E DI + LI+
Sbjct: 91 VINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLIN 150
Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
G C R++ A + + + DVV Y +I +LC +G ++ A LF ME
Sbjct: 151 GFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQME 204
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 238 bits (607), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/365 (35%), Positives = 203/365 (55%), Gaps = 6/365 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A ++ K+ G EP++ T+ +L++G C A +L M E PN V
Sbjct: 125 ALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE------PNVVV 178
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y T+IDGLCK G ++ A EL +M+ + + +VVTYN+L+ G CY+ W++A + +MM
Sbjct: 179 YNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+ + P+VV+F +++ K G +DEA L + MIQ V PN YN++++G C+ GR+
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A++ F M S GC NV +Y+ LI+G+CK + ++ + L+ M +G D+ YNTL
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLI 358
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G ++ ++ A +F M V D + + GLC NG I A+ F +R +
Sbjct: 359 HGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKY 418
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
+ I AYN +I GLCK+ +++ AWELF LP + D TY IMI LC +G +A +L
Sbjct: 419 IGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADEL 478
Query: 363 FLDME 367
M+
Sbjct: 479 IRRMK 483
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 181/331 (54%), Gaps = 8/331 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNT 60
+A +L + + G EPNV YNTLI+GLC+ G +AL L EM G G +
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG-------ADV 211
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T++ GLC G A + M +INP+VVT+ +LI F + +EA+ L+ E
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ V PN V++N I+N LC +G++ +A + +LM G PN YNTL+ GFC
Sbjct: 272 MIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRM 331
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V+ +LF M G ++F+Y+ LI+GYC+ ++ AL ++ M+S+ + PD++ +
Sbjct: 332 VDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCI 391
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L GL ++E A FD+M+ AY I GLCK + +A ELF L +
Sbjct: 392 LLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEG 451
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
+ D R Y +I GLCK+G + A EL R +
Sbjct: 452 VKPDARTYTIMILGLCKNGPRREADELIRRM 482
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 165/306 (53%)
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
++T +I C+ + A + KM P++VT+ SL+HGFC N +A L I M
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G +PNVV +N +++ LCKNG+++ A LL M + G+ + YNTL+ G C +GR
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A + M +V +++ LI+ + K ++ A LY EM+ + P+ V YN++
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GL ++ A K FD M G + Y T I G CK + E ++LF+ + +
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF 347
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
DI YN LI G C+ G+L++A ++F + + D++T+ I++H LC +G+++ A
Sbjct: 348 NADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALV 407
Query: 362 LFLDME 367
F DM
Sbjct: 408 KFDDMR 413
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 134/266 (50%)
Query: 104 GFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRP 163
GF ++ + +A LF EM+ P++V F ++ + + + M G+
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLY 223
+ + + L+ FC R++ A + M +G + ++ ++ L++G+C I A SL
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 224 SEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKN 283
M+ G +P+VV+YNTL GL + ++ A +L +EM++ G+ AD Y T + GLC +
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 284 GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
G +A + R + D+ + LID K G L A EL++ + + + + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 344 NIMIHALCADGKMDKARDLFLDMEAK 369
N +I+ LC G++ A+ F M +K
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASK 310
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 76/164 (46%)
Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHG 265
L G+ + E A +L+ EM+ P +V + L + + E +M+ +G
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG 101
Query: 266 VAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAW 325
++ D +++ I C+ + A+ + + L YE I + L+ G C R+ A+
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 326 ELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L + + +VV YN +I LC +G+++ A +L +ME K
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 234 bits (597), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 196/358 (54%), Gaps = 8/358 (2%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G +P+V+TYN++I+GLC+ G A+ + ++M + C PNTVTY T+I LCKE
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD------CSPNTVTYNTLISTLCKE 378
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
V++A EL + + I P+V T+NSLI G C + A LF EM +G +P+ ++
Sbjct: 379 NQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTY 438
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
N++++ LC GK+DEA +L+ M G + YNTL+DGFC + AEE+F ME
Sbjct: 439 NMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEV 498
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
G N +Y+ LI+G CK++ +E A L +M+ +G KPD YN+L +++
Sbjct: 499 HGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKK 558
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
A + M +G D Y T I GLCK G + A +L R++++ L AYN +I
Sbjct: 559 AADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQ 618
Query: 314 GLCKSGRLKIAWELFRS-LPRGVLIADVVTYNIMIHALC-ADGKMDKARDLFLDMEAK 369
GL + + A LFR L + D V+Y I+ LC G + +A D +++ K
Sbjct: 619 GLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEK 676
Score = 232 bits (592), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 118/357 (33%), Positives = 201/357 (56%), Gaps = 5/357 (1%)
Query: 13 FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
FGC + + N +++G C+ G ALN +EM+N +G F P+ T+ T+++GLCK
Sbjct: 253 FGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF-----PDQYTFNTLVNGLCK 307
Query: 73 EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
G V A E+ M E +P+V TYNS+I G C + EA + +M+ + PN V+
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVT 367
Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
+N +++ LCK +++EA+ L ++ G+ P+ +N+L+ G CLT A ELF M
Sbjct: 368 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMR 427
Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
S GC+ + F+Y++LI+ C +++ AL++ +M G V+ YNTL G + ++
Sbjct: 428 SKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTR 487
Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
A ++FDEM+ HGV+ ++ Y T IDGLCK+ + +A +L + + + D YN L+
Sbjct: 488 EAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLL 547
Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
C+ G +K A ++ +++ D+VTY +I LC G+++ A L ++ K
Sbjct: 548 THFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Score = 208 bits (530), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 117/359 (32%), Positives = 191/359 (53%), Gaps = 7/359 (1%)
Query: 9 KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
K+ V+G +P+V T+N LI LCR A+ + E+M + +G+V P+ T+TT++
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS----YGLV--PDEKTFTTVMQ 232
Query: 69 GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQ 127
G +EG +D A + +M + + + V+ N ++HGFC +A EM +Q G
Sbjct: 233 GYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
P+ +FN ++N LCK G + A ++++M+Q G P+ + YN+++ G C G V A E+
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
M + C N +Y+ LI+ CK ++E A L + SKGI PDV +N+L GL
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCL 412
Query: 248 IHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
A +LF+EM+ G D + Y ID LC G + EA+ + + + + +
Sbjct: 413 TRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVIT 472
Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
YN LIDG CK+ + + A E+F + + + VTYN +I LC +++ A L M
Sbjct: 473 YNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQM 531
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 108/294 (36%), Positives = 166/294 (56%), Gaps = 8/294 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L L G P+V T+N+LI GLC T + VA+ LFEEM + C+P+
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKG------CEPDEF 436
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +ID LC +G +D+A + +M+ +V+TYN+LI GFC AN EA+ +F EM
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
GV N V++N +++ LCK+ ++++A++L++ MI G +P+ + YN+L+ FC G +
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+A ++ +M S GC+ ++ +Y LI+G CK +E A L + KGI YN +
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPV 616
Query: 242 FIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCK-NGYIVEAVELF 293
GLF + A LF EM +++ D +YR GLC G I EAV+
Sbjct: 617 IQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFL 670
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 174/359 (48%), Gaps = 10/359 (2%)
Query: 13 FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
F EP + Y ++ L R+G + E+M + E G T T+ +I+ +
Sbjct: 79 FSPEPAL--YEEILLRLGRSGSFDDMKKILEDMKSSRCEMG------TSTFLILIESYAQ 130
Query: 73 EGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
D+ + M DE + P+ YN +++ N + +M G++P+V
Sbjct: 131 FELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVS 190
Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
+FNV++ LC+ ++ A +LE M G+ P+ + T+M G+ G ++ A + M
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQ 250
GC + S +++++G+CK +E AL+ EM ++ G PD +NTL GL +
Sbjct: 251 VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGH 310
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
V+ A ++ D M + G D + Y + I GLCK G + EAVE+ + + YN
Sbjct: 311 VKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNT 370
Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
LI LCK +++ A EL R L ++ DV T+N +I LC A +LF +M +K
Sbjct: 371 LISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK 429
Score = 135 bits (341), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 95/306 (31%), Positives = 147/306 (48%), Gaps = 16/306 (5%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA + ++ + GC +V TYNTLI+G C+ T A +F+EM E V + N+V
Sbjct: 453 EALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM-----EVHGVSR-NSV 506
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T+IDGLCK V+ A +L +M E P+ TYNSL+ FC D +A + M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
G +P++V++ +++ LCK G+++ AS+LL + G+ YN ++ G +
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCK-NKEIEGALSLYSEMLSKGIKPDVVIYN 239
A LF M E + SY I+ G C I A+ E+L KG P+
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686
Query: 240 TLFIGLFEIHQVERAFKLFDE-MQRHGVAADTWAY-------RTFIDGLCKNGYIVEAVE 291
L GL + E KL + MQ+ + + + R F D L G ++++ +
Sbjct: 687 MLAEGLLTLSMEETLVKLVNMVMQKARFSEEEVSMVKGLLKIRKFQDALATLGGVLDSRQ 746
Query: 292 LFRTLR 297
RT R
Sbjct: 747 PRRTYR 752
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/359 (36%), Positives = 201/359 (55%), Gaps = 6/359 (1%)
Query: 9 KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
K+ G P++ T +L+NG C+ A++L + M FG V PN V Y T+I+
Sbjct: 139 KMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDG----FGFV--PNVVIYNTVIN 192
Query: 69 GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
GLCK ++ A E+F M+ + I + VTYN+LI G + W +A L +M+ + + P
Sbjct: 193 GLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDP 252
Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
NV+ F +++ K G + EA L + MI+ V PN F YN+L++GFC+ G + A+ +F
Sbjct: 253 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 312
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
M S GC +V +Y+ LI G+CK+K +E + L+ EM +G+ D YNTL G +
Sbjct: 313 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQA 372
Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
++ A K+F+ M GV+ D Y +D LC NG I +A+ + L+ + ++DI Y
Sbjct: 373 GKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITY 432
Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
N +I GLC++ +LK AW LFRSL R + D + Y MI LC G +A L M+
Sbjct: 433 NIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 191/364 (52%), Gaps = 6/364 (1%)
Query: 6 LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
L+ K+ G +++++ LI+ CR +AL L +M + G +P+ VT +
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMM----KLGF--RPSIVTLGS 154
Query: 66 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
+++G C+ +A L M PNVV YN++I+G C D N A +F M +G
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
++ + V++N +++ L +G+ +A+RLL M++ + PN + L+D F G + A
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
L+ M NVF+Y+ LING+C + + A ++ M+SKG PDVV YNTL G
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
+ +VE KLF EM G+ D + Y T I G C+ G + A ++F + DI
Sbjct: 335 CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 394
Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
YN L+D LC +G+++ A + L + + D++TYNI+I LC K+ +A LF
Sbjct: 395 VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRS 454
Query: 366 MEAK 369
+ K
Sbjct: 455 LTRK 458
Score = 192 bits (487), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 113/330 (34%), Positives = 176/330 (53%), Gaps = 6/330 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA +L + FG PNV YNT+INGLC+ AL +F M G+ + + V
Sbjct: 167 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK----GI--RADAV 220
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T+I GL G A L M I+PNV+ + +LI F + EA+ L+ EM
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + V PNV ++N ++N C +G + +A + +LM+ G P+ YNTL+ GFC + RV
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+LF M G + F+Y+ LI+GYC+ ++ A +++ M+ G+ PD+V YN L
Sbjct: 341 EDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
L ++E+A + +++Q+ + D Y I GLC+ + EA LFR+L
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV 460
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
+ D AY +I GLC+ G + A +L R +
Sbjct: 461 KPDAIAYITMISGLCRKGLQREADKLCRRM 490
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/295 (33%), Positives = 164/295 (55%), Gaps = 6/295 (2%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A +F + G + TYNTLI+GL +G A L +M + PN +
Sbjct: 203 ALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID------PNVIF 256
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
+T +ID KEG + +A+ L+ +M ++ PNV TYNSLI+GFC +AK +F M+
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
+G P+VV++N ++ CK+ ++++ +L M G+ +AF YNTL+ G+C G++N
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A+++F M G ++ +Y+IL++ C N +IE AL + ++ + D++ YN +
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIII 436
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
GL +++ A+ LF + R GV D AY T I GLC+ G EA +L R ++
Sbjct: 437 QGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMK 491
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 157/306 (51%)
Query: 58 PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
P+ V +T ++ + K D L+ KM++ I+ ++ ++ LIH FC + + A L
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
+MM G +P++V+ ++N C+ + EA L++ M G PN +YNT+++G C
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
+N A E+F ME G + + +Y+ LI+G + A L +M+ + I P+V+
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
+ L + + A L+ EM R V + + Y + I+G C +G + +A +F +
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
D+ YN LI G CKS R++ +LF + L+ D TYN +IH C GK++
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 358 KARDLF 363
A+ +F
Sbjct: 377 VAQKVF 382
Score = 146 bits (368), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 148/294 (50%), Gaps = 10/294 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+AA L + +PNV + LI+ + G+ + A NL++EM + VV PN
Sbjct: 237 DAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS----VV--PNVF 290
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY ++I+G C G + AK +F M + P+VVTYN+LI GFC + + LF EM
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM 350
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
QG+ + ++N +++ C+ GK++ A ++ M+ GV P+ YN L+D C G++
Sbjct: 351 TYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+A + ++ ++ +Y+I+I G C+ +++ A L+ + KG+KPD + Y T+
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 470
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRT 295
GL A KL M+ G Y D ++ Y + EL +
Sbjct: 471 ISGLCRKGLQREADKLCRRMKEDGFMPSERIY----DETLRDHYTSLSAELIKA 520
Score = 142 bits (359), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 130/239 (54%), Gaps = 6/239 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L+ ++ PNVFTYN+LING C G A +F+ M + C P+
Sbjct: 271 LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG------CFPDV 324
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+I G CK V+ +LF +M + + + TYN+LIHG+C A N A+ +F
Sbjct: 325 VTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+D GV P++V++N++++ LC NGK+++A ++E + + + + YN ++ G C T +
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
+ A LF S+ G K + +Y +I+G C+ A L M G P IY+
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYD 503
Score = 120 bits (300), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 131/259 (50%)
Query: 111 WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNT 170
+++A LF EM+ P++V F ++ + K K D L M +G+ + + +
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 171 LMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG 230
L+ FC R++ A L M +G + ++ + L+NG+C+ + A+SL M G
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 231 IKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAV 290
P+VVIYNT+ GL + + A ++F M++ G+ AD Y T I GL +G +A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 291 ELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHAL 350
L R + K + ++ + LID K G L A L++ + R ++ +V TYN +I+
Sbjct: 240 RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
Query: 351 CADGKMDKARDLFLDMEAK 369
C G + A+ +F M +K
Sbjct: 300 CIHGCLGDAKYMFDLMVSK 318
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 205/367 (55%), Gaps = 7/367 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ G +P+ T+ TL++GL + A+ L E M C+P+ V
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG------CQPDLV 216
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +I+GLCK G D A L KM+ I +VV YN++I G C ++A LF +M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++P+V ++N +++ LC G+ +ASRLL M++ + P+ +N L+D F G++
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKL 336
Query: 182 NRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
AE+L+ M +S C +V +Y+ LI G+CK K +E + ++ EM +G+ + V Y T
Sbjct: 337 VEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTT 396
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L G F+ + A +F +M GV D Y +DGLC NG + A+ +F ++
Sbjct: 397 LIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRD 456
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
+LDI Y +I+ LCK+G+++ W+LF SL + +VVTY M+ C G ++A
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 361 DLFLDME 367
LF++M+
Sbjct: 517 ALFVEMK 523
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 126/368 (34%), Positives = 201/368 (54%), Gaps = 7/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA AL ++ V GC+P++ TY +INGLC+ G +ALNL +M G E + V
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE------ADVV 251
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y TIIDGLCK +D A +LF KM+ + I P+V TYN LI C W++A L +M
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG-VRPNAFVYNTLMDGFCLTGR 180
+++ + P++V FN +++ K GK+ EA +L + M++ P+ YNTL+ GFC R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V E+F M G N +Y+ LI+G+ + ++ + A ++ +M+S G+ PD++ YN
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNI 431
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L GL VE A +F+ MQ+ + D Y T I+ LCK G + + +LF +L +
Sbjct: 432 LLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKG 491
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
+ ++ Y ++ G C+ G + A LF + + + TYN +I A DG +
Sbjct: 492 VKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASA 551
Query: 361 DLFLDMEA 368
+L +M +
Sbjct: 552 ELIKEMRS 559
Score = 193 bits (490), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 190/368 (51%), Gaps = 7/368 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A A+ K+ G P++ T N+L+NG C A+ L ++M E G +P+TVT
Sbjct: 129 ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV----EMGY--QPDTVT 182
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
+TT++ GL + +A L +M + P++VTY ++I+G C + + A L +M
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME 242
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
++ +VV +N I++ LCK MD+A L M G++P+ F YN L+ C GR +
Sbjct: 243 KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWS 302
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYNTL 241
A L M ++ ++ LI+ + K ++ A LY EM+ SK PDVV YNTL
Sbjct: 303 DASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTL 362
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +VE ++F EM + G+ +T Y T I G + A +F+ +
Sbjct: 363 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
DI YN L+DGLC +G ++ A +F + + + D+VTY MI ALC GK++ D
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 362 LFLDMEAK 369
LF + K
Sbjct: 483 LFCSLSLK 490
Score = 161 bits (408), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 161/325 (49%), Gaps = 8/325 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A LF K+ G +P+VFTYN LI+ LC G A L +M N P+ V
Sbjct: 268 DAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN------INPDLV 321
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
+ +ID KEG + +A++L+ +M K ++ P+VV YN+LI GFC E +F E
Sbjct: 322 FFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFRE 381
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M +G+ N V++ +++ + D A + + M+ GV P+ YN L+DG C G
Sbjct: 382 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGN 441
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V A +F M+ K ++ +Y+ +I CK ++E L+ + KG+KP+VV Y T
Sbjct: 442 VETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTT 501
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
+ G E A LF EM+ G ++ Y T I ++G + EL + +R
Sbjct: 502 MMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAW 325
+ D + L+ + GRL ++
Sbjct: 562 FAGDASTFG-LVTNMLHDGRLDKSF 585
Score = 158 bits (400), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/325 (28%), Positives = 167/325 (51%), Gaps = 5/325 (1%)
Query: 50 GEFGVVCK----PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGF 105
G FG + K P+ V ++ ++ + K D L +M++ I+ N+ TY+ I+ F
Sbjct: 61 GLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYF 120
Query: 106 CYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNA 165
C + + A + +MM G P++V+ N ++N C ++ EA L++ M+++G +P+
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 166 FVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSE 225
+ TL+ G + + A L M GC+ ++ +Y +ING CK E + AL+L ++
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 226 MLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGY 285
M I+ DVVIYNT+ GL + ++ AF LF++M+ G+ D + Y I LC G
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 286 IVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYN 344
+A L + D+ +N LID K G+L A +L+ + + DVV YN
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 345 IMIHALCADGKMDKARDLFLDMEAK 369
+I C ++++ ++F +M +
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQR 385
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 152/291 (52%)
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+D A LF M P++V ++ L+ N ++ L +M + G+ N+ ++++
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
+N C+ ++ A +L M+++G P+ N+L++GFC R++ A L M MG
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
+ + +++ L++G ++ + A++L M+ KG +PD+V Y + GL + + + A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L ++M++ + AD Y T IDGLCK ++ +A +LF + + D+ YN LI L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C GR A L + + D+V +N +I A +GK+ +A L+ +M
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM 346
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 130/258 (50%)
Query: 112 NEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTL 171
++A LF +M+ P++V F+ +++ + K K D L E M +G+ N + Y+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIF 116
Query: 172 MDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGI 231
++ FC +++ A + M +G ++ + + L+NG+C I A++L +M+ G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 232 KPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
+PD V + TL GLF+ ++ A L + M G D Y I+GLCK G A+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 292 LFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
L + K E D+ YN +IDGLCK + A++LF + + DV TYN +I LC
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 352 ADGKMDKARDLFLDMEAK 369
G+ A L DM K
Sbjct: 297 NYGRWSDASRLLSDMLEK 314
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 115/225 (51%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
K+D+A L M++ P+ ++ L+ + + L M+++G HN+++YS
Sbjct: 55 KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 114
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
I IN +C+ ++ AL++ +M+ G P +V N+L G +++ A L D+M
Sbjct: 115 IFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 174
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G DT + T + GL ++ EAV L + + + D+ Y +I+GLCK G +A
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L + +G + ADVV YN +I LC MD A DLF ME K
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 230 bits (586), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 125/358 (34%), Positives = 194/358 (54%), Gaps = 7/358 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA K+ G +P+ FTY +LI G C+ A +F EM C+ N V
Sbjct: 236 EANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG------CRRNEV 289
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
YT +I GLC +D+A +LF+KMKD+ P V TY LI C + +EA L EM
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G++PN+ ++ V+++ LC K ++A LL M++ G+ PN YN L++G+C G +
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A ++ MES N +Y+ LI GYCK+ + A+ + ++ML + + PDVV YN+L
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSL 468
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + A++L M G+ D W Y + ID LCK+ + EA +LF +L
Sbjct: 469 IDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
++ Y LIDG CK+G++ A + + + + +T+N +IH LCADGK+ +A
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Score = 195 bits (496), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 117/353 (33%), Positives = 180/353 (50%), Gaps = 7/353 (1%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PN++TYN ++NG C+ G+ A ++ E G+ P+ TYT++I G C+ +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIV----EAGL--DPDFFTYTSLIMGYCQRKDL 269
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
D A ++F +M + N V Y LIHG C A +EA LF++M D P V ++ V+
Sbjct: 270 DSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVL 329
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+ LC + + EA L++ M + G++PN Y L+D C + +A EL M G
Sbjct: 330 IKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGL 389
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
NV +Y+ LINGYCK IE A+ + M S+ + P+ YN L G + V +A
Sbjct: 390 MPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMG 448
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
+ ++M V D Y + IDG C++G A L + D Y +ID LC
Sbjct: 449 VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC 508
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
KS R++ A +LF SL + + +VV Y +I C GK+D+A + M +K
Sbjct: 509 KSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Score = 187 bits (475), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 185/365 (50%), Gaps = 7/365 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA LF+K++ C P V TY LI LC + ALNL +EM E G+ KPN
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEME----ETGI--KPNIH 359
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TYT +ID LC + +KA+EL +M ++ + PNV+TYN+LI+G+C +A + M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + PN ++N ++ CK+ + +A +L M++ V P+ YN+L+DG C +G
Sbjct: 420 ESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A L M G + ++Y+ +I+ CK+K +E A L+ + KG+ P+VV+Y L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +V+ A + ++M ++ + I GLC +G + EA L + +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+ + LI L K G A+ F+ + D TY I C +G++ A D
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658
Query: 362 LFLDM 366
+ M
Sbjct: 659 MMAKM 663
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/330 (31%), Positives = 172/330 (52%), Gaps = 7/330 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A L ++ G PNV TYN LING C+ G A+++ E M + PNT
Sbjct: 376 KARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRK------LSPNTR 429
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +I G CK V KA + KM + + P+VVTYNSLI G C + +++ A L M
Sbjct: 430 TYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D+G+ P+ ++ +++ LCK+ +++EA L + + Q GV PN +Y L+DG+C G+V
Sbjct: 489 NDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A + M S C N +++ LI+G C + +++ A L +M+ G++P V L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
L + + A+ F +M G D Y TFI C+ G +++A ++ +R
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
D+ Y+ LI G G+ A+++ + +
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Score = 174 bits (441), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 175/346 (50%), Gaps = 3/346 (0%)
Query: 19 VFTYNTLINGLCRT-GHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
VF L+ C + G + L+L +M N + F + K Y T+++ L + G VD
Sbjct: 142 VFKIRLLMIKSCDSVGDALYVLDLCRKM-NKDERFELKYKLIIGCYNTLLNSLARFGLVD 200
Query: 78 KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
+ K+++++M ++ + PN+ TYN +++G+C + EA ++++ G+ P+ ++ ++
Sbjct: 201 EMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLI 260
Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
C+ +D A ++ M G R N Y L+ G C+ R++ A +LFV M+ C
Sbjct: 261 MGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECF 320
Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
V +Y++LI C ++ AL+L EM GIKP++ Y L L + E+A +L
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
+M G+ + Y I+G CK G I +AV++ + K + R YN LI G CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
S K L + L R VL DVVTYN +I C G D A L
Sbjct: 441 SNVHKAMGVLNKMLERKVL-PDVVTYNSLIDGQCRSGNFDSAYRLL 485
Score = 174 bits (441), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 109/370 (29%), Positives = 188/370 (50%), Gaps = 27/370 (7%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
P+V TYN+LI+G CR+G+ A L M + G+V P+ TYT++ID LCK V
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLM----NDRGLV--PDQWTYTSMIDSLCKSKRV 513
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
++A +LF ++ + +NPNVV Y +LI G+C A +EA + +M+ + PN ++FN +
Sbjct: 514 EEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNAL 573
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
++ LC +GK+ EA+ L E M++IG++P L+ G + A F M S G
Sbjct: 574 IHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGT 633
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
K + +Y+ I YC+ + A + ++M G+ PD+ Y++L G ++ Q AF
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 257 LFDEMQRHGVAADTWAYRTFIDG---------------LCKNGYIVE---AVELFRTLRI 298
+ M+ G + + I LC ++E VEL +
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVE 753
Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKM 356
+ ++Y LI G+C+ G L++A ++F + R G+ +++V +N ++ C K
Sbjct: 754 HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELV-FNALLSCCCKLKKH 812
Query: 357 DKARDLFLDM 366
++A + DM
Sbjct: 813 NEAAKVVDDM 822
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/408 (26%), Positives = 183/408 (44%), Gaps = 60/408 (14%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G P+ +TY ++I+ LC++ A +LF+ + + GV PN V YT +IDG CK
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE----QKGV--NPNVVMYTALIDGYCKA 545
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
G VD+A + KM +N PN +T+N+LIHG C EA L +M+ G+QP V +
Sbjct: 546 GKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTD 605
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
++++ L K+G D A + M+ G +P+A Y T + +C GR+ AE++ M
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665
Query: 194 MGCKHNVFSYSILING----------------------------------------YCKN 213
G ++F+YS LI G Y K
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 214 K-------------EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDE 260
K E + + L +M+ + P+ Y L +G+ E+ + A K+FD
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 261 MQRH-GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
MQR+ G++ + + CK EA ++ + + + + + LI GL K G
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
+ +F++L + D + + I+I + G ++ +LF ME
Sbjct: 846 EKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVME 893
Score = 125 bits (314), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 155/332 (46%), Gaps = 25/332 (7%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L K+ G +P V T LI+ L + G A + F++M + KP+
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG------TKPDAH 638
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TYTT I C+EG + A+++ KM++ ++P++ TY+SLI G+ N A + M
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 122 MDQGVQPNVVSFNVIMN---------------ELCKNGKM---DEASRLLELMIQIGVRP 163
D G +P+ +F ++ ELC M D LLE M++ V P
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 164 NAFVYNTLMDGFCLTGRVNRAEELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSL 222
NA Y L+ G C G + AE++F M+ + G + ++ L++ CK K+ A +
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 223 YSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK 282
+M+ G P + L GL++ + ER +F + + G D A++ IDG+ K
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
Query: 283 NGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
G + ELF + + + Y+ LI+G
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 121/237 (51%)
Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
+N ++N L + G +DE ++ M++ V PN + YN +++G+C G V A + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
G + F+Y+ LI GYC+ K+++ A +++EM KG + + V Y L GL +++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
A LF +M+ Y I LC + EA+ L + + + +I Y LI
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
D LC + + A EL + L+ +V+TYN +I+ C G ++ A D+ ME++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Score = 91.3 bits (225), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 120/263 (45%), Gaps = 25/263 (9%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
++A + K+R G P++FTY++LI G G T A ++ + M + C+P+
Sbjct: 654 LDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTG------CEPSQ 707
Query: 61 VTYTTIIDGLCKEGF------------------VDKAKELFLKMKDENINPNVVTYNSLI 102
T+ ++I L + + D EL KM + ++ PN +Y LI
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767
Query: 103 HGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
G C + A+ +F M ++G+ P+ + FN +++ CK K +EA+++++ MI +G
Sbjct: 768 LGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGH 827
Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
P L+ G G R +F ++ G + ++ I+I+G K +E
Sbjct: 828 LPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYE 887
Query: 222 LYSEMLSKGIKPDVVIYNTLFIG 244
L++ M G K Y+ L G
Sbjct: 888 LFNVMEKNGCKFSSQTYSLLIEG 910
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 220 bits (561), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/351 (31%), Positives = 190/351 (54%), Gaps = 6/351 (1%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
P+V TYNT++ LC +G A+ + + M + C P+ +TYT +I+ C++
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD------CYPDVITYTILIEATCRDSG 254
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
V A +L +M+D P+VVTYN L++G C +EA +M G QPNV++ N+
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNI 314
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
I+ +C G+ +A +LL M++ G P+ +N L++ C G + RA ++ M G
Sbjct: 315 ILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG 374
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
C+ N SY+ L++G+CK K+++ A+ M+S+G PD+V YNT+ L + +VE A
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
++ +++ G + Y T IDGL K G +A++L +R + D Y+ L+ GL
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
+ G++ A + F R + + VT+N ++ LC + D+A D + M
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Score = 211 bits (536), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 118/366 (32%), Positives = 190/366 (51%), Gaps = 9/366 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+AA + L G P+V TYN +I+G C+ G AL++ + M+ P+ V
Sbjct: 155 KAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---------VSPDVV 205
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY TI+ LC G + +A E+ +M + P+V+TY LI C + A L EM
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D+G P+VV++NV++N +CK G++DEA + L M G +PN +N ++ C TGR
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
AE+L M G +V +++ILIN C+ + A+ + +M G +P+ + YN L
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPL 385
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + +++RA + + M G D Y T + LCK+G + +AVE+ L
Sbjct: 386 LHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGC 445
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+ YN +IDGL K+G+ A +L + L D +TY+ ++ L +GK+D+A
Sbjct: 446 SPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIK 505
Query: 362 LFLDME 367
F + E
Sbjct: 506 FFHEFE 511
Score = 171 bits (434), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 29/323 (8%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC------ 56
A L ++R GC P+V TYN L+NG+C+ G A+ +M + + V+
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILR 317
Query: 57 -----------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINP 93
P+ VT+ +I+ LC++G + +A ++ KM P
Sbjct: 318 SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP 377
Query: 94 NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
N ++YN L+HGFC + A M+ +G P++V++N ++ LCK+GK+++A +L
Sbjct: 378 NSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEIL 437
Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
+ G P YNT++DG G+ +A +L M + K + +YS L+ G +
Sbjct: 438 NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSRE 497
Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
+++ A+ + E GI+P+ V +N++ +GL + Q +RA M G + +Y
Sbjct: 498 GKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSY 557
Query: 274 RTFIDGLCKNGYIVEAVELFRTL 296
I+GL G EA+EL L
Sbjct: 558 TILIEGLAYEGMAKEALELLNEL 580
Score = 145 bits (366), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 144/272 (52%), Gaps = 6/272 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
M+A L + G P+V T+N LIN LCR G A+++ E+M C+PN+
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHG------CQPNS 379
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
++Y ++ G CKE +D+A E +M P++VTYN+++ C +A + +
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+ +G P ++++N +++ L K GK +A +LL+ M ++P+ Y++L+ G G+
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V+ A + F E MG + N +++ ++ G CK+++ + A+ M+++G KP+ Y
Sbjct: 500 VDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
L GL + A +L +E+ G+ + A
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKKSSA 591
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 127/239 (53%), Gaps = 3/239 (1%)
Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
V N + ++ + G+++E + LE M+ G P+ TL+ GFC G+ +A ++
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
+E G +V +Y+++I+GYCK EI ALS+ M + PDVV YNT+ L + +
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGK 219
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
+++A ++ D M + D Y I+ C++ + A++L +R D+ YN
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L++G+CK GRL A + +P +V+T+NI++ ++C+ G+ A L DM K
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 219 bits (558), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/364 (32%), Positives = 193/364 (53%), Gaps = 6/364 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A LF K+ GC PNV TYNTLI+G C+ L MA E PN ++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLE------PNLIS 277
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y +I+GLC+EG + + + +M + + VTYN+LI G+C ++++A + EM+
Sbjct: 278 YNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEML 337
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ P+V+++ +++ +CK G M+ A L+ M G+ PN Y TL+DGF G +N
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A + M G +V +Y+ LING+C ++E A+++ +M KG+ PDVV Y+T+
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G + V+ A ++ EM G+ DT Y + I G C+ EA +L+ + +
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
D Y LI+ C G L+ A +L + ++ DVVTY+++I+ L + +A+ L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 363 FLDM 366
L +
Sbjct: 578 LLKL 581
Score = 211 bits (537), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 205/372 (55%), Gaps = 21/372 (5%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A + ++ G P+V TY +LI+ +C+ G+ A+ ++M +C PN
Sbjct: 328 QALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-----RVRGLC-PNER 381
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TYTT++DG ++G++++A + +M D +P+VVTYN+LI+G C +A + +M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G+ P+VVS++ +++ C++ +DEA R+ M++ G++P+ Y++L+ GFC R
Sbjct: 442 KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRT 501
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A +L+ M +G + F+Y+ LIN YC ++E AL L++EM+ KG+ PDVV Y+ L
Sbjct: 502 KEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVL 561
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID---------------GLCKNGYI 286
GL + + A +L ++ Y T I+ G C G +
Sbjct: 562 INGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMM 621
Query: 287 VEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIM 346
EA ++F ++ ++ D AYN +I G C++G ++ A+ L++ + + + VT +
Sbjct: 622 TEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Query: 347 IHALCADGKMDK 358
+ AL +GK+++
Sbjct: 682 VKALHKEGKVNE 693
Score = 184 bits (467), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 161/303 (53%), Gaps = 1/303 (0%)
Query: 58 PNTVTYTTIIDGLCKEGF-VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
P ++Y ++D + + A+ +F +M + ++PNV TYN LI GFC+A + + A
Sbjct: 167 PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALT 226
Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
LF +M +G PNVV++N +++ CK K+D+ +LL M G+ PN YN +++G C
Sbjct: 227 LFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
GR+ + M G + +Y+ LI GYCK AL +++EML G+ P V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
Y +L + + + RA + D+M+ G+ + Y T +DG + GY+ EA + R +
Sbjct: 347 TYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
+ + YN LI+G C +G+++ A + + L DVV+Y+ ++ C +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 357 DKA 359
D+A
Sbjct: 467 DEA 469
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 157/316 (49%), Gaps = 1/316 (0%)
Query: 55 VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYAN-DWNE 113
+C + + ++ + +DKA + + P V++YN+++ + + +
Sbjct: 129 LCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 114 AKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD 173
A+ +F EM++ V PNV ++N+++ C G +D A L + M G PN YNTL+D
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
G+C +++ +L SM G + N+ SY+++ING C+ ++ + +EM +G
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
D V YNTL G + +A + EM RHG+ Y + I +CK G + A+E
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
+R+ + R Y L+DG + G + A+ + R + VVTYN +I+ C
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 354 GKMDKARDLFLDMEAK 369
GKM+ A + DM+ K
Sbjct: 429 GKMEDAIAVLEDMKEK 444
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 196/361 (54%), Gaps = 6/361 (1%)
Query: 6 LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
L ++L FG PNV Y TLI+G C+ G A +LF EM G+ G+V N TYT
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM----GKLGLVA--NERTYTV 238
Query: 66 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
+I+GL K G + E++ KM+++ + PN+ TYN +++ C +A +F EM ++G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
V N+V++N ++ LC+ K++EA+++++ M G+ PN YNTL+DGFC G++ +A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
L ++S G ++ +Y+IL++G+C+ + GA + EM +GIKP V Y L
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
+E+A +L M+ G+ D Y I G C G + EA LF+++ E +
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
YN +I G CK G A +L + + L +V +Y MI LC + K +A L
Sbjct: 479 VIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEK 538
Query: 366 M 366
M
Sbjct: 539 M 539
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 115/352 (32%), Positives = 186/352 (52%), Gaps = 6/352 (1%)
Query: 18 NVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVD 77
+V+++ LI G C G + +L E+ EFG PN V YTT+IDG CK+G ++
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELT----EFGF--SPNVVIYTTLIDGCCKKGEIE 215
Query: 78 KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
KAK+LF +M + N TY LI+G + ++ +M + GV PN+ ++N +M
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
N+LCK+G+ +A ++ + M + GV N YNTL+ G C ++N A ++ M+S G
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335
Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
N+ +Y+ LI+G+C ++ ALSL ++ S+G+ P +V YN L G A K+
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395
Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
EM+ G+ Y ID ++ + +A++L ++ L D+ Y+ LI G C
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455
Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
G++ A LF+S+ + V YN MI C +G +A L +ME K
Sbjct: 456 KGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK 507
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 146/269 (54%), Gaps = 6/269 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A +F ++R G N+ TYNTLI GLCR A + ++M + PN +
Sbjct: 286 DAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG------INPNLI 339
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T+IDG C G + KA L +K ++P++VTYN L+ GFC D + A + EM
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G++P+ V++ ++++ ++ M++A +L M ++G+ P+ Y+ L+ GFC+ G++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
N A LF SM C+ N Y+ +I GYCK AL L EM K + P+V Y +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT 270
L + + + A +L ++M G+ T
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 152/338 (44%), Gaps = 34/338 (10%)
Query: 66 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
+I G F + L + E Y +I+ + + N + F EM+D G
Sbjct: 65 VISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNG 124
Query: 126 VQP----------------------------------NVVSFNVIMNELCKNGKMDEASR 151
P +V SF +++ C+ G+++++
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFD 184
Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
LL + + G PN +Y TL+DG C G + +A++LF M +G N +Y++LING
Sbjct: 185 LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLF 244
Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
KN + +Y +M G+ P++ YN + L + + + AF++FDEM+ GV+ +
Sbjct: 245 KNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIV 304
Query: 272 AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL 331
Y T I GLC+ + EA ++ ++ ++ YN LIDG C G+L A L R L
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 332 PRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L +VTYNI++ C G A + +ME +
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Score = 139 bits (349), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 128/236 (54%), Gaps = 6/236 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA + +++ G PN+ TYNTLI+G C G AL+L ++ + P+ V
Sbjct: 321 EANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG------LSPSLV 374
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY ++ G C++G A ++ +M++ I P+ VTY LI F +++ +A L + M
Sbjct: 375 TYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM 434
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G+ P+V +++V+++ C G+M+EASRL + M++ PN +YNT++ G+C G
Sbjct: 435 EELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSS 494
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
RA +L ME NV SY +I CK ++ + A L +M+ GI P I
Sbjct: 495 YRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSI 550
>sp|O04504|PPR27_ARATH Pentatricopeptide repeat-containing protein At1g09820
OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1
Length = 606
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 124/358 (34%), Positives = 198/358 (55%), Gaps = 11/358 (3%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK--- 72
+PNVFT+N +IN LC+TG A ++ E+M +G C PN V+Y T+IDG CK
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMK----VYG--CSPNVVSYNTLIDGYCKLGG 273
Query: 73 EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
G + KA + +M + +++PN+ T+N LI GF ++ + +F EM+DQ V+PNV+S
Sbjct: 274 NGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVIS 333
Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
+N ++N LC GK+ EA + + M+ GV+PN YN L++GFC + A ++F S++
Sbjct: 334 YNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVK 393
Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
G Y++LI+ YCK +I+ +L EM +GI PDV YN L GL +E
Sbjct: 394 GQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453
Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
A KLFD++ G+ D + ++G C+ G +A L + + + + YN ++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512
Query: 313 DGLCKSGRLKIAWELFRSLPR-GVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
G CK G LK A + + + L +V +YN+++ GK++ A L +M K
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Score = 191 bits (486), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/357 (30%), Positives = 187/357 (52%), Gaps = 11/357 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCR---TGHTIVALNLFEEMANGNGEFGVVCKP 58
+A + ++V+GC PNV +YNTLI+G C+ G A + +EM + P
Sbjct: 241 KARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEND------VSP 294
Query: 59 NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
N T+ +IDG K+ + + ++F +M D+++ PNV++YNSLI+G C +EA +
Sbjct: 295 NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMR 354
Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
+M+ GVQPN++++N ++N CKN + EA + + G P +YN L+D +C
Sbjct: 355 DKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL 414
Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
G+++ L ME G +V +Y+ LI G C+N IE A L+ ++ SKG+ PD+V +
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTF 473
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-R 297
+ L G + +A L EM + G+ Y + G CK G + A + + +
Sbjct: 474 HILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEK 533
Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
+ +++ +YN L+ G + G+L+ A L + L+ + +TY I+ + G
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 150/256 (58%), Gaps = 3/256 (1%)
Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
++ EM+ + +QPNV +FNV++N LCK GKM++A ++E M G PN YNTL+DG+C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 177 L---TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
G++ +A+ + M N+ +++ILI+G+ K+ + G++ ++ EML + +KP
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
+V+ YN+L GL ++ A + D+M GV + Y I+G CKN + EA+++F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
+++ R YN LID CK G++ + L + R ++ DV TYN +I LC +
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449
Query: 354 GKMDKARDLFLDMEAK 369
G ++ A+ LF + +K
Sbjct: 450 GNIEAAKKLFDQLTSK 465
Score = 167 bits (424), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 162/315 (51%), Gaps = 11/315 (3%)
Query: 56 CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
CKP ++ L KE + ++ +M I PNV T+N +I+ C N+A+
Sbjct: 191 CKP-------LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCK---NGKMDEASRLLELMIQIGVRPNAFVYNTLM 172
+ +M G PNVVS+N +++ CK NGKM +A +L+ M++ V PN +N L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 173 DGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIK 232
DGF + + ++F M K NV SY+ LING C +I A+S+ +M+S G++
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 233 PDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
P+++ YN L G + ++ A +F ++ G T Y ID CK G I + L
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 293 FRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCA 352
+ D+ YNCLI GLC++G ++ A +LF L L D+VT++I++ C
Sbjct: 424 KEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCR 482
Query: 353 DGKMDKARDLFLDME 367
G+ KA L +M
Sbjct: 483 KGESRKAAMLLKEMS 497
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/274 (29%), Positives = 147/274 (53%), Gaps = 8/274 (2%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
+PNV +YN+LINGLC G A+++ ++M + GV +PN +TY +I+G CK
Sbjct: 328 KPNVISYNSLINGLCNGGKISEAISMRDKMVSA----GV--QPNLITYNALINGFCKNDM 381
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+ +A ++F +K + P YN LI +C ++ L EM +G+ P+V ++N
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++ LC+NG ++ A +L + + G+ P+ ++ LM+G+C G +A L M MG
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNTLFIGLFEIHQVERA 254
K +Y+I++ GYCK ++ A ++ ++M + ++ +V YN L G + ++E A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVE 288
L +EM G+ + Y + + G++ +
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>sp|P0C894|PP143_ARATH Putative pentatricopeptide repeat-containing protein At2g02150
OS=Arabidopsis thaliana GN=At2g02150 PE=3 SV=1
Length = 761
Score = 216 bits (550), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 200/368 (54%), Gaps = 7/368 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A LF +++ G P+ TYN++I+G + G + FEEM + + C+P+ +T
Sbjct: 281 ARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD------MCCEPDVIT 334
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y +I+ CK G + E + +MK + PNVV+Y++L+ FC +A +++M
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ PN ++ +++ CK G + +A RL M+Q+GV N Y L+DG C R+
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
AEELF M++ G N+ SY+ LI+G+ K K ++ AL L +E+ +GIKPD+++Y T
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
GL + ++E A + +EM+ G+ A++ Y T +D K+G E + L ++ L E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARD 361
+ + + LIDGLCK+ + A + F + L A+ + MI LC D +++ A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 362 LFLDMEAK 369
LF M K
Sbjct: 635 LFEQMVQK 642
Score = 179 bits (454), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 169/315 (53%)
Query: 55 VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
VC P + + L G +++A + F KMK + P + N L+H F ++
Sbjct: 187 VCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDV 246
Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
K F +M+ G +P V ++N++++ +CK G ++ A L E M G+ P+ YN+++DG
Sbjct: 247 KRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDG 306
Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
F GR++ F M+ M C+ +V +Y+ LIN +CK ++ L Y EM G+KP+
Sbjct: 307 FGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPN 366
Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
VV Y+TL + +++A K + +M+R G+ + + Y + ID CK G + +A L
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
+ + E ++ Y LIDGLC + R+K A ELF + +I ++ +YN +IH
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 355 KMDKARDLFLDMEAK 369
MD+A +L +++ +
Sbjct: 487 NMDRALELLNELKGR 501
Score = 178 bits (452), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 178/324 (54%), Gaps = 7/324 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A ++ +R G PN +TY +LI+ C+ G+ A L EM E+ N V
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW------NVV 438
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TYT +IDGLC + +A+ELF KM + PN+ +YN+LIHGF A + + A L E+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G++P+++ + + LC K++ A ++ M + G++ N+ +Y TLMD + +G
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNP 558
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
L M+ + + V ++ +LI+G CKNK + A+ ++ + + G++ + I+
Sbjct: 559 TEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTA 618
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
+ GL + +QVE A LF++M + G+ D AY + +DG K G ++EA+ L + +
Sbjct: 619 MIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIG 678
Query: 301 YELDIRAYNCLIDGLCKSGRLKIA 324
+LD+ AY L+ GL +L+ A
Sbjct: 679 MKLDLLAYTSLVWGLSHCNQLQKA 702
Score = 123 bits (309), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/303 (30%), Positives = 152/303 (50%), Gaps = 9/303 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA LF K+ G PN+ +YN LI+G + + AL L E+ G G KP+ +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL-KGRG-----IKPDLL 508
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y T I GLC ++ AK + +MK+ I N + Y +L+ + + + E L EM
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+ ++ VV+F V+++ LCKN + +A + G++ NA ++ ++DG C +
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
V A LF M G + +Y+ L++G K + AL+L +M G+K D++ Y +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTS 688
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L GL +Q+++A +EM G+ D + + + G I EAVEL L +K
Sbjct: 689 LVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYL--MK 746
Query: 301 YEL 303
++L
Sbjct: 747 HQL 749
>sp|Q9SHK2|PPR17_ARATH Pentatricopeptide repeat-containing protein At1g06580
OS=Arabidopsis thaliana GN=At1g06580 PE=2 SV=1
Length = 500
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 120/365 (32%), Positives = 197/365 (53%), Gaps = 6/365 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A + K+ G EP++ T+ +L+NG C A++L +++ G+ +PN V
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV------GLGYEPNVVI 186
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y TIID LC++G V+ A ++ MK I P+VVTYNSLI ++ W + + +MM
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ P+V++F+ +++ K G++ EA + MIQ V PN YN+L++G C+ G ++
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A+++ + S G N +Y+ LINGYCK K ++ + + M G+ D YNTL+
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLY 366
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G + + A K+ M GV D + + +DGLC +G I +A+ L+ K
Sbjct: 367 QGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTV 426
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
+ I YN +I GLCK+ +++ AW LF SL + DV+TY M+ L +A +L
Sbjct: 427 VGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHEL 486
Query: 363 FLDME 367
+ M+
Sbjct: 487 YRKMQ 491
Score = 176 bits (446), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 183/365 (50%), Gaps = 6/365 (1%)
Query: 5 ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
+LF L + G +++++ TLI+ CR +AL+ +M E P+ VT+
Sbjct: 100 SLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFE------PSIVTFG 153
Query: 65 TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
++++G C +A L ++ PNVV YN++I C N A + M
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKM 213
Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G++P+VV++N ++ L +G ++R+L M+++G+ P+ ++ L+D + G++ A
Sbjct: 214 GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEA 273
Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
++ + M N+ +Y+ LING C + ++ A + + ++SKG P+ V YNTL G
Sbjct: 274 KKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLING 333
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
+ +V+ K+ M R GV DT+ Y T G C+ G A ++ + D
Sbjct: 334 YCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPD 393
Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
+ +N L+DGLC G++ A L + + ++TYNI+I LC K++ A LF
Sbjct: 394 MYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFC 453
Query: 365 DMEAK 369
+ K
Sbjct: 454 SLALK 458
Score = 142 bits (357), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 175/367 (47%), Gaps = 10/367 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTG-HTIV---ALNLFEEMANGNGEFGVVC 56
+E L L + C F+ + R+G H+I AL LF +MA +
Sbjct: 22 LEKGNLVTALSLRICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHP------ 75
Query: 57 KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKC 116
P+ V ++ ++ + K + LF ++ I+ ++ ++ +LI FC + A
Sbjct: 76 LPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALS 135
Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
+MM G +P++V+F ++N C + EA L++ ++ +G PN +YNT++D C
Sbjct: 136 CLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLC 195
Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
G+VN A ++ M+ MG + +V +Y+ LI + + + S+M+ GI PDV+
Sbjct: 196 EKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVI 255
Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
++ L + Q+ A K ++EM + V + Y + I+GLC +G + EA ++ L
Sbjct: 256 TFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVL 315
Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
+ + YN LI+G CK+ R+ ++ + R + D TYN + C GK
Sbjct: 316 VSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKF 375
Query: 357 DKARDLF 363
A +
Sbjct: 376 SAAEKVL 382
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 109/222 (49%)
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
K ++A L M + P+ ++ L+ + LF +E +G H+++S++
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 205 ILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRH 264
LI+ +C+ + ALS +M+ G +P +V + +L G +++ A L D++
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 265 GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G + Y T ID LC+ G + A+++ + ++ + D+ YN LI L SG ++
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
+ + R + DV+T++ +I +G++ +A+ + +M
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEM 280
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G P+++T+N L++GLC G AL E++ G++ TY II GLCK
Sbjct: 389 GVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII------TYNIIIKGLCKA 442
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQP 128
V+ A LF + + ++P+V+TY +++ G W EA L+ +M + G+ P
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 207 bits (526), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/369 (33%), Positives = 197/369 (53%), Gaps = 11/369 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EAA + ++ + G P+ TY L+NGLC+ G A +LF + KP V
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP----------KPEIV 354
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
+ T+I G G +D AK + M I P+V TYNSLI+G+ A + +
Sbjct: 355 IFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M ++G +PNV S+ ++++ CK GK+DEA +L M G++PN +N L+ FC R
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ A E+F M GCK +V++++ LI+G C+ EI+ AL L +M+S+G+ + V YNT
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNT 534
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L +++ A KL +EM G D Y + I GLC+ G + +A LF +
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDG 594
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
+ + N LI+GLC+SG ++ A E + + D+VT+N +I+ LC G+++
Sbjct: 595 HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGL 654
Query: 361 DLFLDMEAK 369
+F ++A+
Sbjct: 655 TMFRKLQAE 663
Score = 202 bits (513), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 120/359 (33%), Positives = 191/359 (53%), Gaps = 11/359 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L ++ + GC P+ T+N +I GLC+ +N +M N G P+ +
Sbjct: 270 EALQLLEEMFLMGCVPDAETFNDVILGLCKFDR----INEAAKMVNRMLIRGFA--PDDI 323
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +++GLCK G VD AK+LF ++ P +V +N+LIHGF ++AK + +M
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 122 MDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+ G+ P+V ++N ++ K G + A +L M G +PN + Y L+DGFC G+
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGK 439
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
++ A + M + G K N ++ LI+ +CK I A+ ++ EM KG KPDV +N+
Sbjct: 440 IDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNS 499
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L GL E+ +++ A L +M GV A+T Y T I+ + G I EA +L +
Sbjct: 500 LISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG 559
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
LD YN LI GLC++G + A LF + R ++ NI+I+ LC G +++A
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA 618
Score = 187 bits (476), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 98/288 (34%), Positives = 159/288 (55%), Gaps = 8/288 (2%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTV 61
A + +R GC+PNV++Y L++G C+ G A N+ EM A+G KPNTV
Sbjct: 408 ALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADG-------LKPNTV 460
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+ +I CKE + +A E+F +M + P+V T+NSLI G C ++ A L +M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ +GV N V++N ++N + G++ EA +L+ M+ G + YN+L+ G C G V
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
++A LF M G + S +ILING C++ +E A+ EM+ +G PD+V +N+L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEA 289
GL ++E +F ++Q G+ DT + T + LCK G++ +A
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 181 bits (458), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 181/367 (49%), Gaps = 12/367 (3%)
Query: 2 EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+ L +++R V+ CEP +YN ++ L VA N+F +M + P
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRK------IPPTL 217
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
T+ ++ C +D A L M PN V Y +LIH N NEA L E
Sbjct: 218 FTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEE 277
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M G P+ +FN ++ LCK +++EA++++ M+ G P+ Y LM+G C GR
Sbjct: 278 MFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGR 337
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKPDVVIYN 239
V+ A++LF + K + ++ LI+G+ + ++ A ++ S+M+ S GI PDV YN
Sbjct: 338 VDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYN 393
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
+L G ++ V A ++ +M+ G + ++Y +DG CK G I EA + +
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSAD 453
Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
+ + +NCLI CK R+ A E+FR +PR DV T+N +I LC ++ A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 360 RDLFLDM 366
L DM
Sbjct: 514 LWLLRDM 520
Score = 144 bits (362), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 156/315 (49%), Gaps = 5/315 (1%)
Query: 56 CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAK 115
C+P +Y +++ L A +F M I P + T+ ++ FC N+ + A
Sbjct: 178 CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 116 CLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF 175
L +M G PN V + +++ L K +++EA +LLE M +G P+A +N ++ G
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 176 CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDV 235
C R+N A ++ M G + +Y L+NG CK ++ A L+ + KP++
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEI 353
Query: 236 VIYNTLFIGLFEIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
VI+NTL G +++ A + +M +G+ D Y + I G K G + A+E+
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
+R + ++ +Y L+DG CK G++ A+ + + L + V +N +I A C +
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEH 473
Query: 355 KMDKARDLFLDMEAK 369
++ +A ++F +M K
Sbjct: 474 RIPEAVEIFREMPRK 488
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 139/252 (55%), Gaps = 6/252 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA +F ++ GC+P+V+T+N+LI+GLC AL L +M + GVV NTV
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE----GVVA--NTV 530
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T+I+ + G + +A++L +M + + +TYNSLI G C A + ++A+ LF +M
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G P+ +S N+++N LC++G ++EA + M+ G P+ +N+L++G C GR+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRI 650
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+F +++ G + +++ L++ CK + A L E + G P+ ++ L
Sbjct: 651 EDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Query: 242 FIGLFEIHQVER 253
+ ++R
Sbjct: 711 LQSIIPQETLDR 722
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 131/271 (48%), Gaps = 7/271 (2%)
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL-LELM 156
Y LI ++ L I+M D+G+ F IM + K G + +RL LE+
Sbjct: 114 YQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMR 173
Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNR-AEELFVSMESMGCKHNVFSYSILINGYCKNKE 215
P YN +++ ++G ++ A +F M S +F++ +++ +C E
Sbjct: 174 NVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNE 232
Query: 216 IEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRT 275
I+ ALSL +M G P+ VIY TL L + ++V A +L +EM G D +
Sbjct: 233 IDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFND 292
Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
I GLCK I EA ++ + I + D Y L++GLCK GR+ A +LF +P+
Sbjct: 293 VILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-- 350
Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDM 366
++V +N +IH G++D A+ + DM
Sbjct: 351 --PEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 206 bits (524), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 185/368 (50%), Gaps = 10/368 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEE-MANGNGEFGVVCKPNT 60
EA +++ G E ++ Y +LI G C G LF+E + G+ P
Sbjct: 230 EAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS-------PCA 282
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
+TY T+I G CK G + +A E+F M + + PNV TY LI G C EA L
Sbjct: 283 ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNL 342
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+++ +PN V++N+I+N+LCK+G + +A ++ELM + RP+ YN L+ G C G
Sbjct: 343 MIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGD 402
Query: 181 VNRAEELFVSM--ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
++ A +L M +S +V SY+ LI+G CK + AL +Y ++ K D V
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
N L + V +A +L+ ++ + ++ Y IDG CK G + A L +R+
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ + + YNCL+ LCK G L AW LF + R DVV++NIMI G +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 359 ARDLFLDM 366
A L + M
Sbjct: 583 AESLLVGM 590
Score = 194 bits (494), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 193/403 (47%), Gaps = 43/403 (10%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A +L ++R P+VF+YNT+I G C AL L EM G+G C + V
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM-KGSG-----CSWSLV 213
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T+ +ID CK G +D+A +MK + ++V Y SLI GFC + + K LF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++G P +++N ++ CK G++ EAS + E MI+ GVRPN + Y L+DG C G+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A +L M + N +Y+I+IN CK+ + A+ + M + +PD + YN L
Sbjct: 334 KEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNIL 393
Query: 242 FIGLFEIHQVERAFKLFDEMQRHG--VAADTWAYRTFIDGLCKN---------------- 283
GL ++ A KL M + D +Y I GLCK
Sbjct: 394 LGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEK 453
Query: 284 -------------------GYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIA 324
G + +A+EL++ + K + Y +IDG CK+G L +A
Sbjct: 454 LGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVA 513
Query: 325 WELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
L + L V YN ++ +LC +G +D+A LF +M+
Sbjct: 514 KGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQ 556
Score = 167 bits (424), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 164/307 (53%), Gaps = 2/307 (0%)
Query: 59 NTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLF 118
N + ++ GLC+ KA L +M+ ++ P+V +YN++I GFC + +A L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 119 IEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLT 178
EM G ++V++ ++++ CK GKMDEA L+ M +G+ + VY +L+ GFC
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 179 GRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
G ++R + LF + G +Y+ LI G+CK +++ A ++ M+ +G++P+V Y
Sbjct: 261 GELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTY 320
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
L GL + + + A +L + M + Y I+ LCK+G + +AVE+ ++
Sbjct: 321 TGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKK 380
Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR--GVLIADVVTYNIMIHALCADGKM 356
+ D YN L+ GLC G L A +L + + DV++YN +IH LC + ++
Sbjct: 381 RRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRL 440
Query: 357 DKARDLF 363
+A D++
Sbjct: 441 HQALDIY 447
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/351 (28%), Positives = 178/351 (50%), Gaps = 9/351 (2%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
EPN TYN +IN LC+ G A+ + E M +P+ +TY ++ GLC +G
Sbjct: 349 EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR------TRPDNITYNILLGGLCAKGD 402
Query: 76 VDKA-KELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
+D+A K L+L +KD + +P+V++YN+LIHG C N ++A ++ ++++ + V+
Sbjct: 403 LDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT 462
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
N+++N K G +++A L + + + N+ Y ++DGFC TG +N A+ L M
Sbjct: 463 NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
+ +VF Y+ L++ CK ++ A L+ EM PDVV +N + G + ++
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
A L M R G++ D + Y I+ K GY+ EA+ F + +E D + ++
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 314 GLCKSGRLKIAWELFRSL-PRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
G EL + L + +++ +T +M + + MD A+ L
Sbjct: 643 YCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLL 693
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 142/276 (51%)
Query: 79 AKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMN 138
A + KM + + N V+ + L+ + A + M+ +G NV + N+++
Sbjct: 91 AFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLK 150
Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
LC+N + +A LL M + + P+ F YNT++ GFC + +A EL M+ GC
Sbjct: 151 GLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSW 210
Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
++ ++ ILI+ +CK +++ A+ EM G++ D+V+Y +L G + +++R LF
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
DE+ G + Y T I G CK G + EA E+F + ++ Y LIDGLC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 319 GRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
G+ K A +L + + VTYNI+I+ LC DG
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDG 366
Score = 136 bits (343), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 145/283 (51%), Gaps = 8/283 (2%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
+P+V +YN LI+GLC+ AL++++ + G + VT +++ K G
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG------AGDRVTTNILLNSTLKAGD 474
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
V+KA EL+ ++ D I N TY ++I GFC N AK L +M +QP+V +N
Sbjct: 475 VNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNC 534
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
+++ LCK G +D+A RL E M + P+ +N ++DG G + AE L V M G
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG 594
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
++F+YS LIN + K ++ A+S + +M+ G +PD I +++ + ++
Sbjct: 595 LSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLT 654
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
+L ++ + D T +D +C + ++ + R LR+
Sbjct: 655 ELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAK--RLLRV 695
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 129/286 (45%), Gaps = 17/286 (5%)
Query: 91 INPNVVTYNSLIHGFCYANDWNEAKC------------LFIEMMDQGVQPNVVSFNVIMN 138
+NP V Y+ L++ F + C +F + +D G + N +M
Sbjct: 24 LNPRV--YSKLVNAFSETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMA 80
Query: 139 ELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKH 198
+L ++ + A M++ N + L++ + + A + M G
Sbjct: 81 KLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAF 140
Query: 199 NVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLF 258
NV++++IL+ G C+N E A+SL EM + PDV YNT+ G E ++E+A +L
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 259 DEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKS 318
+EM+ G + + ID CK G + EA+ + ++ + E D+ Y LI G C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 319 GRLKIAWELFRS-LPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
G L LF L RG +TYN +I C G++ +A ++F
Sbjct: 261 GELDRGKALFDEVLERGDSPC-AITYNTLIRGFCKLGQLKEASEIF 305
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%)
Query: 200 VFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFD 259
F+ + L+ +++ E A S Y +ML + V + L ++ + AF +
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 260 EMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSG 319
M + G A + + + + GLC+N +AV L R +R D+ +YN +I G C+
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGK 191
Query: 320 RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
L+ A EL + +VT+ I+I A C GKMD+A +M+
Sbjct: 192 ELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMK 239
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A LF +++ P+V ++N +I+G + G A +L M+ P+
Sbjct: 547 QAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAG------LSPDLF 600
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY+ +I+ K G++D+A F KM D P+ +S++ + ++ L ++
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKL 660
Query: 122 MDQGVQPNVVSFNVIMNELC-KNGKMDEASRLLEL 155
+D+ + + +M+ +C + MD A RLL +
Sbjct: 661 VDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 199/430 (46%), Gaps = 64/430 (14%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE---------F 52
EA L + + + G P+V +Y+T++NG CR G L E M +
Sbjct: 264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 323
Query: 53 GVVCK--------------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
G++C+ P+TV YTT+IDG CK G + A + F +M +I
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 93 PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
P+V+TY ++I GFC D EA LF EM +G++P+ V+F ++N CK G M +A R+
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILING--- 209
MIQ G PN Y TL+DG C G ++ A EL M +G + N+F+Y+ ++NG
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 210 --------------------------------YCKNKEIEGALSLYSEMLSKGIKPDVVI 237
YCK+ E++ A + EML KG++P +V
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVT 563
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
+N L G +E KL + M G+A + + + + C + A +++ +
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
D + Y L+ G CK+ +K AW LF+ + V TY+++I K
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 358 KARDLFLDME 367
+AR++F M
Sbjct: 684 EAREVFDQMR 693
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/297 (35%), Positives = 160/297 (53%), Gaps = 6/297 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA LF ++ G EP+ T+ LING C+ GH A + M C PN
Sbjct: 403 VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG------CSPNV 456
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTYTT+IDGLCKEG +D A EL +M + PN+ TYNS+++G C + + EA L E
Sbjct: 457 VTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGE 516
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
G+ + V++ +M+ CK+G+MD+A +L+ M+ G++P +N LM+GFCL G
Sbjct: 517 FEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ E+L M + G N +++ L+ YC ++ A ++Y +M S+G+ PD Y
Sbjct: 577 LEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYEN 636
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
L G + ++ A+ LF EM+ G + Y I G K +EA E+F +R
Sbjct: 637 LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMR 693
Score = 195 bits (495), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 115/369 (31%), Positives = 198/369 (53%), Gaps = 7/369 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGH-TIVALNLFEEMANGNGEFGVVCKPNT 60
EA +F K+ +G +V + N + L + + T A+ +F E E GV N
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFP----EVGVCW--NV 246
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
+Y +I +C+ G + +A L L M+ + P+V++Y+++++G+C + ++ L
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M +G++PN + I+ LC+ K+ EA MI+ G+ P+ VY TL+DGFC G
Sbjct: 307 MKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGD 366
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ A + F M S +V +Y+ +I+G+C+ ++ A L+ EM KG++PD V +
Sbjct: 367 IRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTE 426
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L G + ++ AF++ + M + G + + Y T IDGLCK G + A EL + +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
+ +I YN +++GLCKSG ++ A +L L AD VTY ++ A C G+MDKA+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 361 DLFLDMEAK 369
++ +M K
Sbjct: 547 EILKEMLGK 555
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 178/337 (52%), Gaps = 6/337 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A+ F ++ P+V TY +I+G C+ G + A LF EM F +P++VT
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM------FCKGLEPDSVT 423
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
+T +I+G CK G + A + M +PNVVTY +LI G C D + A L EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+QPN+ ++N I+N LCK+G ++EA +L+ G+ + Y TLMD +C +G ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
+A+E+ M G + + ++++L+NG+C + +E L + ML+KGI P+ +N+L
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLV 603
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
+ ++ A ++ +M GV D Y + G CK + EA LF+ ++ +
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
+ + Y+ LI G K + A E+F + R L AD
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700
Score = 179 bits (455), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 153/265 (57%), Gaps = 6/265 (2%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
GC PNV TY TLI+GLC+ G A L EM + + +PN TY +I++GLCK
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEM------WKIGLQPNIFTYNSIVNGLCKS 504
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
G +++A +L + + +N + VTY +L+ +C + + ++A+ + EM+ +G+QP +V+F
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
NV+MN C +G +++ +LL M+ G+ PNA +N+L+ +C+ + A ++ M S
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
G + +Y L+ G+CK + ++ A L+ EM KG V Y+ L G + +
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 254 AFKLFDEMQRHGVAADTWAYRTFID 278
A ++FD+M+R G+AAD + F D
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSD 709
Score = 55.5 bits (132), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEM-ANGNGEFGVVCKPNTVTYTTIIDGLCK 72
G PN T+N+L+ C + A ++++M + G G P+ TY ++ G CK
Sbjct: 591 GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-------PDGKTYENLVKGHCK 643
Query: 73 EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
+ +A LF +MK + + +V TY+ LI GF + EA+ +F +M +G+ +
Sbjct: 644 ARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEI 703
Query: 133 FNVIMNELCKNGKMD 147
F+ + K + D
Sbjct: 704 FDFFSDTKYKGKRPD 718
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 204 bits (519), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 111/352 (31%), Positives = 187/352 (53%), Gaps = 6/352 (1%)
Query: 15 CEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEG 74
C+P V TY LI G AL L +EM + KP+ TY TII G+CKEG
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG------LKPDMFTYNTIIRGMCKEG 277
Query: 75 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
VD+A E+ ++ + P+V++YN L+ W E + L +M + PNVV+++
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
+++ LC++GK++EA LL+LM + G+ P+A+ Y+ L+ FC GR++ A E +M S
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
GC ++ +Y+ ++ CKN + + AL ++ ++ G P+ YNT+F L+ RA
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDG 314
+ EM +G+ D Y + I LC+ G + EA EL +R ++ + YN ++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 315 LCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
CK+ R++ A + S+ + TY ++I + G +A +L D+
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 186 bits (472), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 178/359 (49%), Gaps = 7/359 (1%)
Query: 10 LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
L FG +P+VF YN LING C+ A + + M + + P+TVTY +I
Sbjct: 150 LEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD------FSPDTVTYNIMIGS 202
Query: 70 LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
LC G +D A ++ ++ +N P V+TY LI +EA L EM+ +G++P+
Sbjct: 203 LCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPD 262
Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
+ ++N I+ +CK G +D A ++ + G P+ YN L+ G+ E+L
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
M S C NV +YSILI C++ +IE A++L M KG+ PD Y+ L
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
+++ A + + M G D Y T + LCKNG +A+E+F L + + +YN
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 442
Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
+ L SG A + + + D +TYN MI LC +G +D+A +L +DM +
Sbjct: 443 TMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 163/332 (49%), Gaps = 6/332 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L ++ G +P++FTYNT+I G+C+ G A + + C+P+ +
Sbjct: 246 EALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKG------CEPDVI 299
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+Y ++ L +G ++ ++L KM E +PNVVTY+ LI C EA L M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++G+ P+ S++ ++ C+ G++D A LE MI G P+ YNT++ C G+
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
++A E+F + +GC N SY+ + + + + AL + EM+S GI PD + YN++
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
L V+ AF+L +M+ Y + G CK I +A+ + ++
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
+ Y LI+G+ +G A EL L R
Sbjct: 540 RPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 36/328 (10%)
Query: 71 CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
C+ G ++ L M + NP+V+ LI GF + +A +E++++ QP+V
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKA-VRVMEILEKFGQPDV 158
Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
++N ++N CK ++D+A+R+L+ M P+ YN ++ C G+++ A ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
+ S C+ V +Y+ILI ++ AL L EMLS+G+KPD+ YNT+ G+ +
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 251 VERAFKLFDEMQRHGVAADT---------------W--------------------AYRT 275
V+RAF++ ++ G D W Y
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 276 FIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGV 335
I LC++G I EA+ L + ++ D +Y+ LI C+ GRL +A E ++
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 336 LIADVVTYNIMIHALCADGKMDKARDLF 363
+ D+V YN ++ LC +GK D+A ++F
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIF 426
Score = 138 bits (347), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 139/269 (51%), Gaps = 1/269 (0%)
Query: 101 LIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIG 160
+ H C + ++ E+ L M+ +G P+V+ ++ + +A R++E++ + G
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 161 VRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGAL 220
+P+ F YN L++GFC R++ A + M S + +Y+I+I C +++ AL
Sbjct: 155 -QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLAL 213
Query: 221 SLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
+ +++LS +P V+ Y L V+ A KL DEM G+ D + Y T I G+
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 281 CKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADV 340
CK G + A E+ R L + E D+ +YN L+ L G+ + +L + +V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 341 VTYNIMIHALCADGKMDKARDLFLDMEAK 369
VTY+I+I LC DGK+++A +L M+ K
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEK 362
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 100/188 (53%), Gaps = 9/188 (4%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNL-FEEMANGNGEFGVVCKPNT 60
+A +F KL GC PN +YNT+ + L +G I AL++ E M+NG P+
Sbjct: 421 QALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNG-------IDPDE 473
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
+TY ++I LC+EG VD+A EL + M+ +P+VVTYN ++ GFC A+ +A +
Sbjct: 474 ITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLES 533
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ G +PN ++ V++ + G EA L +++I + + + L F L
Sbjct: 534 MVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDA-ISEYSFKRLHRTFPLLNV 592
Query: 181 VNRAEELF 188
+ R+ + F
Sbjct: 593 LQRSSQTF 600
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 6/114 (5%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+ A + +++ G +P+ TYN++I+ LCR G A L +M + EF P+
Sbjct: 455 IRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMR--SCEF----HPSV 508
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
VTY ++ G CK ++ A + M PN TY LI G +A EA
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEA 562
>sp|Q9SZ20|PP339_ARATH Pentatricopeptide repeat-containing protein At4g26800
OS=Arabidopsis thaliana GN=At4g26800 PE=2 SV=2
Length = 514
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/361 (32%), Positives = 195/361 (54%), Gaps = 6/361 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
A + K+ G EP++ T ++L+NG C + A+ + +M + G+ K + V
Sbjct: 141 SALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME----KMGI--KRDVV 194
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T +ID LCK V A E+ +MKD I+PNVVTY+SLI G C + +A+ EM
Sbjct: 195 VDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 254
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + PNV++F+ +++ K GK+ + + ++MIQ+ + PN F Y++L+ G C+ RV
Sbjct: 255 DSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 314
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A ++ M S GC NV +YS L NG+ K+ ++ + L +M +G+ + V NTL
Sbjct: 315 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 374
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G F+ +++ A +F M +G+ + +Y + GL NG + +A+ F ++ +
Sbjct: 375 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 434
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+LDI Y +I G+CK+ +K A++LF L + D Y IMI L G +A
Sbjct: 435 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADA 494
Query: 362 L 362
L
Sbjct: 495 L 495
Score = 182 bits (462), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/354 (30%), Positives = 188/354 (53%), Gaps = 6/354 (1%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
P+++T N L+N CR AL+ +M + G+ +P+ VT +++++G C
Sbjct: 120 SPDLYTCNILVNCFCRCFQPSSALSYLGKMM----KLGI--EPDIVTASSLVNGFCLSNS 173
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+ A + +M+ I +VV LI C A + M D+G+ PNVV+++
Sbjct: 174 IKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSS 233
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
++ LCK+G++ +A R L M + PN ++ L+D + G++++ + ++ M M
Sbjct: 234 LITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMS 293
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
NVF+YS LI G C + ++ A+ + M+SKG P+VV Y+TL G F+ +V+
Sbjct: 294 IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGI 353
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
KL D+M + GVAA+T + T I G + G I A+ +F + +IR+YN ++ GL
Sbjct: 354 KLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGL 413
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+G ++ A F + + D++TY IMIH +C + +A DLF ++ K
Sbjct: 414 FANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFK 467
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 153/294 (52%), Gaps = 6/294 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+ A + +++ G PNV TY++LI GLC++G A EM + PN
Sbjct: 210 VPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKK------INPNV 263
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
+T++ +ID K G + K ++ M +I+PNV TY+SLI+G C N +EA +
Sbjct: 264 ITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 323
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+ +G PNVV+++ + N K+ ++D+ +LL+ M Q GV N NTL+ G+ G+
Sbjct: 324 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 383
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
++ A +F M S G N+ SY+I++ G N E+E ALS + M D++ Y
Sbjct: 384 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTI 443
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
+ G+ + V+ A+ LF +++ V D AY I L + G EA L R
Sbjct: 444 MIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNR 497
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 153/315 (48%), Gaps = 5/315 (1%)
Query: 59 NTVTYTTII-DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
T+ Y ++ GL F D A LF+ M P++V +N ++ ++ L
Sbjct: 49 TTIDYREVLRSGLHNIKF-DDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINL 107
Query: 118 FIEMMD-QGVQ--PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
+ + + +G++ P++ + N+++N C+ + A L M+++G+ P+ ++L++G
Sbjct: 108 WKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNG 167
Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
FCL+ + A + ME MG K +V +ILI+ CKN+ + AL + M +GI P+
Sbjct: 168 FCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPN 227
Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
VV Y++L GL + ++ A + EM + + + ID K G + + +++
Sbjct: 228 VVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYK 287
Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
+ + + ++ Y+ LI GLC R+ A ++ + +VVTY+ + +
Sbjct: 288 MMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSS 347
Query: 355 KMDKARDLFLDMEAK 369
++D L DM +
Sbjct: 348 RVDDGIKLLDDMPQR 362
>sp|Q9M302|PP270_ARATH Pentatricopeptide repeat-containing protein At3g48810
OS=Arabidopsis thaliana GN=At3g48810 PE=2 SV=1
Length = 659
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 123/379 (32%), Positives = 194/379 (51%), Gaps = 50/379 (13%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G EPNVFTYN L+ LC+ A L EM+N C P+ V+YTT+I +C+
Sbjct: 176 GFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKG------CCPDAVSYTTVISSMCEV 229
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
G V + +EL E P V YN+LI+G C +D+ A L EM+++G+ PNV+S+
Sbjct: 230 GLVKEGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 134 NVIMNELCKNGKMDEASRLLELMIQ----------------------------------- 158
+ ++N LC +G+++ A L M++
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 159 -IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIE 217
G++PN YNTL+ GFC G + +A +F ME +GC N+ +Y LING+ K ++
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 218 GALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFI 277
GA+ ++++ML+ G P+VV+Y + L + + A L + M + A + FI
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFI 464
Query: 278 DGLCKNGYIVEAVELFRTL-RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSL-PRGV 335
GLC G + A ++FR + + + +I YN L+DGL K+ R++ A+ L R + RGV
Sbjct: 465 KGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGV 524
Query: 336 LIADVVTYNIMIHALCADG 354
+ TYN ++H C G
Sbjct: 525 EWSS-STYNTLLHGSCNAG 542
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 172/356 (48%), Gaps = 14/356 (3%)
Query: 8 MKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTII 67
MKL+ F C ++F ++I+ + G A+ +F + EFG C P+ Y ++
Sbjct: 102 MKLQGFHCSEDLFI--SVISVYRQVGLAERAVEMFYRIK----EFG--CDPSVKIYNHVL 153
Query: 68 DGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQ 127
D L E + ++ MK + PNV TYN L+ C N + AK L +EM ++G
Sbjct: 154 DTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCC 213
Query: 128 PNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEEL 187
P+ VS+ +++ +C+ G + E L E P VYN L++G C A EL
Sbjct: 214 PDAVSYTTVISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFEL 268
Query: 188 FVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFE 247
M G NV SYS LIN C + +IE A S ++ML +G P++ ++L G F
Sbjct: 269 MREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFL 328
Query: 248 IHQVERAFKLFDEMQR-HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
A L+++M R G+ + AY T + G C +G IV+AV +F + + +IR
Sbjct: 329 RGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIR 388
Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
Y LI+G K G L A ++ + +VV Y M+ ALC K +A L
Sbjct: 389 TYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444
Score = 167 bits (422), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 177/369 (47%), Gaps = 12/369 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
A +F +++ FGC+P+V YN +++ L + ++ +M E PN
Sbjct: 129 RAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFE------PNVF 182
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY ++ LCK VD AK+L ++M ++ P+ V+Y ++I C E + L
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL---- 238
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ +P V +N ++N LCK A L+ M++ G+ PN Y+TL++ C +G++
Sbjct: 239 -AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQI 297
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK-GIKPDVVIYNT 240
A M GC N+++ S L+ G AL L+++M+ G++P+VV YNT
Sbjct: 298 ELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNT 357
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
L G + +A +F M+ G + + Y + I+G K G + AV ++ +
Sbjct: 358 LVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG 417
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
++ Y +++ LC+ + K A L + + V T+N I LC G++D A
Sbjct: 418 CCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 477
Query: 361 DLFLDMEAK 369
+F ME +
Sbjct: 478 KVFRQMEQQ 486
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 162/342 (47%), Gaps = 10/342 (2%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G PNV +Y+TLIN LC +G +A + +M C PN T ++++ G
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRG------CHPNIYTLSSLVKGCFLR 329
Query: 74 GFVDKAKELFLKM-KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
G A +L+ +M + + PNVV YN+L+ GFC + +A +F M + G PN+ +
Sbjct: 330 GTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRT 389
Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
+ ++N K G +D A + M+ G PN VY +++ C + AE L M
Sbjct: 390 YGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG-IKPDVVIYNTLFIGLFEIHQV 251
C +V +++ I G C ++ A ++ +M + P++V YN L GL + +++
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRI 509
Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
E A+ L E+ GV + Y T + G C G A++L + + D N +
Sbjct: 510 EEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMI 569
Query: 312 IDGLCKSGRLKIAWELFR--SLPRGVLIADVVTYNIMIHALC 351
I CK G+ + A ++ S R DV++Y +I LC
Sbjct: 570 ILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLC 611
Score = 125 bits (314), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 138/282 (48%), Gaps = 11/282 (3%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
++A ++F + GC PN+ TY +LING + G A+ ++ +M C PN
Sbjct: 369 VKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSG------CCPNV 422
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
V YT +++ LC+ +A+ L M EN P+V T+N+ I G C A + A+ +F +
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482
Query: 121 MMDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
M Q PN+V++N +++ L K +++EA L + GV ++ YNTL+ G C G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542
Query: 180 RVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKG---IKPDVV 236
A +L M G + + +++I YCK + E A + +++S G +PDV+
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-DLVSCGRRKWRPDVI 601
Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
Y + GL + E L + M G+ + I+
Sbjct: 602 SYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 129/259 (49%), Gaps = 10/259 (3%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A ++ K+ GC PNV Y ++ LCR A +L E M+ N C P+ T
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKEN------CAPSVPT 459
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDEN-INPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+ I GLC G +D A+++F +M+ ++ PN+VTYN L+ G AN EA L E+
Sbjct: 460 FNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+GV+ + ++N +++ C G A +L+ M+ G P+ N ++ +C G+
Sbjct: 520 FMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKA 579
Query: 182 NRAEELF--VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
RA ++ VS + +V SY+ +I G C++ E + L M+S GI P + ++
Sbjct: 580 ERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWS 639
Query: 240 TLFIGLFEIHQVERAFKLF 258
L I F + + RA F
Sbjct: 640 VL-INCFILDDIVRAHDQF 657
Score = 107 bits (268), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 119/236 (50%), Gaps = 5/236 (2%)
Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
++F V++ +L +G++D LL+ M G + ++ +++ + G RA E+F
Sbjct: 77 LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYR 136
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
++ GC +V Y+ +++ I+ +Y +M G +P+V YN L L + ++
Sbjct: 137 IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
V+ A KL EM G D +Y T I +C+ G + E EL ++E + YN
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVYNA 251
Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
LI+GLCK K A+EL R + + +V++Y+ +I+ LC G+++ A M
Sbjct: 252 LINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Score = 103 bits (257), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 150/362 (41%), Gaps = 71/362 (19%)
Query: 37 VALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVV 96
+AL+ F+ +AN N + K +T+ +I L +G VD + L +MK
Sbjct: 58 LALHFFKSIANSN-----LFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK--------- 103
Query: 97 TYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELM 156
+ GF + D LFI ++ Q G + A + +
Sbjct: 104 -----LQGFHCSED------LFISVISVYRQV---------------GLAERAVEMFYRI 137
Query: 157 IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
+ G P+ +YN ++D R+ ++ M+ G + NVF+Y++L+ CKN ++
Sbjct: 138 KEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKV 197
Query: 217 EGALSLYSEMLSKGIKPDVV------------------------------IYNTLFIGLF 246
+GA L EM +KG PD V +YN L GL
Sbjct: 198 DGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLC 257
Query: 247 EIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIR 306
+ H + AF+L EM G++ + +Y T I+ LC +G I A + +I
Sbjct: 258 KEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIY 317
Query: 307 AYNCLIDGLCKSGRLKIAWELFRSLPRGV-LIADVVTYNIMIHALCADGKMDKARDLFLD 365
+ L+ G G A +L+ + RG L +VV YN ++ C+ G + KA +F
Sbjct: 318 TLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSH 377
Query: 366 ME 367
ME
Sbjct: 378 ME 379
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 61/120 (50%)
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
QV+ L +M+ G + + I + G AVE+F ++ + ++ YN
Sbjct: 91 QVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYN 150
Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
++D L R+++ + ++R + R +V TYN+++ ALC + K+D A+ L ++M K
Sbjct: 151 HVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNK 210
>sp|O49436|PP327_ARATH Pentatricopeptide repeat-containing protein At4g20090
OS=Arabidopsis thaliana GN=EMB1025 PE=3 SV=1
Length = 660
Score = 203 bits (516), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 117/370 (31%), Positives = 189/370 (51%), Gaps = 13/370 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
A +F + C P+ +TY TL++GLC+ A+ L +EM + C P+ V
Sbjct: 205 RAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG------CSPSPV 258
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y +IDGLCK+G + + +L M + PN VTYN+LIHG C ++A L M
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ PN V++ ++N L K + +A RLL M + G N +Y+ L+ G G+
Sbjct: 319 VSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKA 378
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A L+ M GCK N+ YS+L++G C+ + A + + M++ G P+ Y++L
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSL 438
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G F+ E A +++ EM + G + + + Y IDGLC G + EA+ ++ + +
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSL-----PRGVLIADVVTYNIMIHALCADGKM 356
+ D AY+ +I GLC G + A +L+ + P+ DVVTYNI++ LC +
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQ--PDVVTYNILLDGLCMQKDI 556
Query: 357 DKARDLFLDM 366
+A DL M
Sbjct: 557 SRAVDLLNSM 566
Score = 190 bits (483), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 129/419 (30%), Positives = 196/419 (46%), Gaps = 65/419 (15%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L +++ GC P+ YN LI+GLC+ G L + M F C PN V
Sbjct: 240 EAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM------FLKGCVPNEV 293
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFC---YAND-------- 110
TY T+I GLC +G +DKA L +M PN VTY +LI+G A D
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 111 ------------------------WNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
EA L+ +M ++G +PN+V ++V+++ LC+ GK
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
+EA +L MI G PNA+ Y++LM GF TG A +++ M+ GC N F YS+L
Sbjct: 414 NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVL 473
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM---QR 263
I+G C ++ A+ ++S+ML+ GIKPD V Y+++ GL I ++ A KL+ EM +
Sbjct: 474 IDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEE 533
Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL------CK 317
D Y +DGLC I AV+L ++ + D+ N ++ L C
Sbjct: 534 PKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCD 593
Query: 318 SGRLKIAWELFRSLPR---------------GVLIADVVTYNIMIHALCADGKMDKARD 361
GR + + R L R L T+ +++ +C K++ A D
Sbjct: 594 KGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAID 652
Score = 184 bits (468), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/390 (30%), Positives = 188/390 (48%), Gaps = 39/390 (10%)
Query: 13 FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCK 72
F C+ +V ++N+++N + G L ++ + N N + PN +++ +I LCK
Sbjct: 142 FRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNI--SPNGLSFNLVIKALCK 199
Query: 73 EGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVS 132
FVD+A E+F M + P+ TY +L+ G C +EA L EM +G P+ V
Sbjct: 200 LRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVI 259
Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
+NV+++ LCK G + ++L++ M G PN YNTL+ G CL G++++A L M
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
S C N +Y LING K + A+ L S M +G + IY+ L GLF+ + E
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL-------------------- 292
A L+ +M G + Y +DGLC+ G EA E+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLM 439
Query: 293 ---FRT------LRILKYELDIRA-------YNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
F+T +++ K E+D Y+ LIDGLC GR+K A ++ + +
Sbjct: 440 KGFFKTGLCEEAVQVWK-EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDM 366
D V Y+ +I LC G MD A L+ +M
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 167/334 (50%), Gaps = 9/334 (2%)
Query: 38 ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN----P 93
A++LF M + EF CK + ++ ++++ + EG + E + + + N+N P
Sbjct: 131 AVDLFHRMVD---EFR--CKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 94 NVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLL 153
N +++N +I C + A +F M ++ P+ ++ +M+ LCK ++DEA LL
Sbjct: 186 NGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLL 245
Query: 154 ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKN 213
+ M G P+ +YN L+DG C G + R +L +M GC N +Y+ LI+G C
Sbjct: 246 DEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLK 305
Query: 214 KEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAY 273
+++ A+SL M+S P+ V Y TL GL + + A +L M+ G + Y
Sbjct: 306 GKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 274 RTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPR 333
I GL K G EA+ L+R + + +I Y+ L+DGLC+ G+ A E+ +
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 334 GVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
+ + TY+ ++ G ++A ++ +M+
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 5/312 (1%)
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNS----LIHGFCYANDWNEAKC 116
++ + K DKA +LF +M DE +V ++NS +I+ Y
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 117 LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFC 176
+ M+ + PN +SFN+++ LCK +D A + M + P+ + Y TLMDG C
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 177 LTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVV 236
R++ A L M+S GC + Y++LI+G CK ++ L M KG P+ V
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 237 IYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
YNTL GL ++++A L + M + Y T I+GL K +AV L ++
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 297 RILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKM 356
Y L+ Y+ LI GL K G+ + A L+R + ++V Y++++ LC +GK
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKP 413
Query: 357 DKARDLFLDMEA 368
++A+++ M A
Sbjct: 414 NEAKEILNRMIA 425
Score = 116 bits (290), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 146/316 (46%), Gaps = 11/316 (3%)
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLI---HGFCYANDWNEAKCLF 118
T +++I+ G D ++L +++ EN V+ S I + A+ ++A LF
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLEN---RVIIERSFIVVFRAYGKAHLPDKAVDLF 135
Query: 119 IEMMDQ-GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ----IGVRPNAFVYNTLMD 173
M+D+ + +V SFN ++N + G + ++ + + PN +N ++
Sbjct: 136 HRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195
Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
C V+RA E+F M C + ++Y L++G CK + I+ A+ L EM S+G P
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSP 255
Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
VIYN L GL + + R KL D M G + Y T I GLC G + +AV L
Sbjct: 256 SPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL 315
Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
+ K + Y LI+GL K R A L S+ + Y+++I L +
Sbjct: 316 ERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKE 375
Query: 354 GKMDKARDLFLDMEAK 369
GK ++A L+ M K
Sbjct: 376 GKAEEAMSLWRKMAEK 391
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 14/196 (7%)
Query: 184 AEELFVSMESMGC-KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
+E++F S MG K + S +I Y + + + ++LS+ + VI F
Sbjct: 60 SEKMFKSAPKMGSFKLGDSTLSSMIESYANSGDFDSV----EKLLSRIRLENRVIIERSF 115
Query: 243 IGLF----EIHQVERAFKLFDEM-QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
I +F + H ++A LF M ++ + ++ + G +E + +
Sbjct: 116 IVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVV 175
Query: 298 ILKYELDIR----AYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
++I ++N +I LCK + A E+FR +P + D TY ++ LC +
Sbjct: 176 NSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKE 235
Query: 354 GKMDKARDLFLDMEAK 369
++D+A L +M+++
Sbjct: 236 ERIDEAVLLLDEMQSE 251
>sp|Q9FLJ4|PP440_ARATH Pentatricopeptide repeat-containing protein At5g61400
OS=Arabidopsis thaliana GN=At5g61400 PE=2 SV=1
Length = 654
Score = 202 bits (513), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 190/363 (52%), Gaps = 6/363 (1%)
Query: 6 LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
L ++ G +PNV+ Y I LCR A +FE M + GV+ PN TY+
Sbjct: 221 LLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK----KHGVL--PNLYTYSA 274
Query: 66 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
+IDG CK G V +A L+ ++ + PNVV + +L+ GFC A + A+ LF+ M+ G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
V PN+ +N +++ CK+G M EA LL M + + P+ F Y L++G C+ +V A
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGL 245
LF M++ + +Y+ LI+GYCK +E AL L SEM + G++P+++ ++TL G
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 246 FEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDI 305
+ ++ A L+ EM G+ D Y ID K + EA+ L+ + +
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPND 514
Query: 306 RAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
+ CL+DG K GRL +A + ++ + + V + +I LC +G + +A F D
Sbjct: 515 HTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSD 574
Query: 366 MEA 368
M +
Sbjct: 575 MRS 577
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 193/365 (52%), Gaps = 6/365 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA +F ++ G PN++TY+ +I+G C+TG+ A L++E+ PN V
Sbjct: 252 EAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAE------LLPNVV 305
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+ T++DG CK + A+ LF+ M ++PN+ YN LIHG C + + EA L EM
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEM 365
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ P+V ++ +++N LC ++ EA+RL + M + P++ YN+L+ G+C +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+A +L M + G + N+ ++S LI+GYC ++I+ A+ LY EM KGI PDVV Y L
Sbjct: 426 EQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTAL 485
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
F+ ++ A +L+ +M G+ + + +DG K G + A++ ++ +
Sbjct: 486 IDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRS 545
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+ + CLI+GLC++G + A F + + D+ +Y M+ + ++
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMM 605
Query: 362 LFLDM 366
L DM
Sbjct: 606 LQCDM 610
Score = 162 bits (409), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 108/356 (30%), Positives = 172/356 (48%), Gaps = 6/356 (1%)
Query: 11 RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL 70
R C P+ +++NGL R ++ M + G+V P+ Y +
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR----GLV--PDVHIYFVLFQCC 209
Query: 71 CKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
K+G K ++L +M I PNV Y I C N EA+ +F M GV PN+
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
+++ +++ CK G + +A L + ++ + PN V+ TL+DGFC + A LFV
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
M G N++ Y+ LI+G+CK+ + A+ L SEM S + PDV Y L GL Q
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
V A +LF +M+ + + Y + I G CK + +A++L + E +I ++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
LIDG C +K A L+ + ++ DVVTY +I A + M +A L+ DM
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505
Score = 151 bits (381), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 148/298 (49%), Gaps = 6/298 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA L ++ P+VFTY LINGLC A LF++M N P++
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER------IFPSS 409
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
TY ++I G CKE +++A +L +M + PN++T+++LI G+C D A L+ E
Sbjct: 410 ATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFE 469
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M +G+ P+VV++ +++ K M EA RL M++ G+ PN + L+DGF GR
Sbjct: 470 MTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGR 529
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
++ A + + N ++ LI G C+N I A +S+M S GI PD+ Y +
Sbjct: 530 LSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVS 589
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
+ G + ++ L +M + G+ + + NGY+ A L + R+
Sbjct: 590 MLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRL 647
Score = 145 bits (366), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 144/283 (50%)
Query: 87 KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
++ +P+ S+++G ++ + M+ +G+ P+V + V+ K G
Sbjct: 156 REMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLY 215
Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
+ +LL+ M +G++PN ++Y + C ++ AE++F M+ G N+++YS +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAM 275
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
I+GYCK + A LY E+L + P+VV++ TL G + ++ A LF M + GV
Sbjct: 276 IDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGV 335
Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
+ + Y I G CK+G ++EAV L + L D+ Y LI+GLC ++ A
Sbjct: 336 DPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANR 395
Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
LF+ + + TYN +IH C + M++A DL +M A
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 198/367 (53%), Gaps = 6/367 (1%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A ++ ++ G NV+T N ++N LC+ G + + F G + P+ VT
Sbjct: 219 AWGVYQEISRSGVGINVYTLNIMVNALCKDGK-MEKVGTFLSQVQEKGVY-----PDIVT 272
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y T+I +G +++A EL M + +P V TYN++I+G C + AK +F EM+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ P+ ++ ++ E CK G + E ++ M V P+ ++++M F +G ++
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
+A F S++ G + Y+ILI GYC+ I A++L +EML +G DVV YNT+
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
GL + + A KLF+EM + D++ IDG CK G + A+ELF+ ++ +
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
LD+ YN L+DG K G + A E++ + ++ ++Y+I+++ALC+ G + +A +
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 363 FLDMEAK 369
+ +M +K
Sbjct: 573 WDEMISK 579
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 182/366 (49%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L + G P V+TYNT+INGLC+ G A +F EM P++
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG------LSPDST 341
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +++ CK+G V + +++F M+ ++ P++V ++S++ F + + ++A F +
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G+ P+ V + +++ C+ G + A L M+Q G + YNT++ G C +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A++LF M + ++ +ILI+G+CK ++ A+ L+ +M K I+ DVV YNTL
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G ++ ++ A +++ +M + +Y ++ LC G++ EA ++ +
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+ + N +I G C+SG + + D ++YN +I+ + M KA
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 362 LFLDME 367
L ME
Sbjct: 642 LVKKME 647
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 176/361 (48%), Gaps = 8/361 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+E +F +R P++ ++++++ R+G+ AL F N E G++ P+
Sbjct: 357 VETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF----NSVKEAGLI--PDN 410
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
V YT +I G C++G + A L +M + +VVTYN+++HG C EA LF E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M ++ + P+ + ++++ CK G + A L + M + +R + YNTL+DGF G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
++ A+E++ M S SYSIL+N C + A ++ EM+SK IKP V+I N+
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
+ G ++M G D +Y T I G + + +A L + + +
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQ 650
Query: 301 YEL--DIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
L D+ YN ++ G C+ ++K A + R + + D TY MI+ + + +
Sbjct: 651 GGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTE 710
Query: 359 A 359
A
Sbjct: 711 A 711
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 90/281 (32%), Positives = 148/281 (52%), Gaps = 8/281 (2%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
GC +V TYNT+++GLC+ A LF EM P++ T T +IDG CK
Sbjct: 440 GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER------ALFPDSYTLTILIDGHCKL 493
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
G + A ELF KMK++ I +VVTYN+L+ GF D + AK ++ +M+ + + P +S+
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
++++N LC G + EA R+ + MI ++P + N+++ G+C +G + E M S
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMIS 613
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK--GIKPDVVIYNTLFIGLFEIHQV 251
G + SY+ LI G+ + + + A L +M + G+ PDV YN++ G +Q+
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQM 673
Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVEL 292
+ A + +M GV D Y I+G + EA +
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714
Score = 151 bits (382), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 156/336 (46%), Gaps = 9/336 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A F ++ G P+ Y LI G CR G VA+NL EM C + V
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG------CAMDVV 446
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY TI+ GLCK + +A +LF +M + + P+ T LI G C + A LF +M
Sbjct: 447 TYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
++ ++ +VV++N +++ K G +D A + M+ + P Y+ L++ C G +
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A ++ M S K V + +I GYC++ S +M+S+G PD + YNTL
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 242 FIGLFEIHQVERAFKLFDEMQRH--GVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
G + +AF L +M+ G+ D + Y + + G C+ + EA + R +
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRS-LPRG 334
D Y C+I+G L A+ + L RG
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRG 722
Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 154/339 (45%), Gaps = 35/339 (10%)
Query: 66 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
+I L + G+V+ A ++ ++ + NV T N +++ C + ++ ++G
Sbjct: 206 LIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKG 265
Query: 126 VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAE 185
V P++V++N +++ G M+EA L+ M G P + YNT+++G C G+ RA+
Sbjct: 266 VYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAK 325
Query: 186 ELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSK---------------- 229
E+F M G + +Y L+ CK ++ ++S+M S+
Sbjct: 326 EVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLF 385
Query: 230 -------------------GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
G+ PD VIY L G + A L +EM + G A D
Sbjct: 386 TRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDV 445
Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
Y T + GLCK + EA +LF + D LIDG CK G L+ A ELF+
Sbjct: 446 VTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQK 505
Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ + DVVTYN ++ G +D A++++ DM +K
Sbjct: 506 MKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 123/234 (52%), Gaps = 8/234 (3%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A LF K++ +V TYNTL++G + G A ++ +M + P ++
Sbjct: 499 AMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE------ILPTPIS 552
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y+ +++ LC +G + +A ++ +M +NI P V+ NS+I G+C + + ++ + +M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI--QIGVRPNAFVYNTLMDGFCLTGR 180
+G P+ +S+N ++ + M +A L++ M Q G+ P+ F YN+++ GFC +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
+ AE + M G + +Y+ +ING+ + A ++ EML +G PD
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 148/327 (45%), Gaps = 17/327 (5%)
Query: 57 KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-----------------NINPNVVTYN 99
K +++ + +I L + G + A+ L+M N N ++
Sbjct: 110 KHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFD 169
Query: 100 SLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQI 159
LI + A EA F + +G ++ + N ++ L + G ++ A + + + +
Sbjct: 170 LLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRS 229
Query: 160 GVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGA 219
GV N + N +++ C G++ + ++ G ++ +Y+ LI+ Y +E A
Sbjct: 230 GVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEA 289
Query: 220 LSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDG 279
L + M KG P V YNT+ GL + + ERA ++F EM R G++ D+ YR+ +
Sbjct: 290 FELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLME 349
Query: 280 LCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIAD 339
CK G +VE ++F +R D+ ++ ++ +SG L A F S+ LI D
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 340 VVTYNIMIHALCADGKMDKARDLFLDM 366
V Y I+I C G + A +L +M
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEM 436
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 17/256 (6%)
Query: 131 VSFNVIMNELCKNGKMDEA-SRLLELMIQIGVR----------------PNAFVYNTLMD 173
+S + +++ L ++G++ +A S LL ++ + GV N V++ L+
Sbjct: 114 LSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIR 173
Query: 174 GFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKP 233
+ ++ A E F + S G ++ + + LI + +E A +Y E+ G+
Sbjct: 174 TYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGI 233
Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
+V N + L + ++E+ ++Q GV D Y T I G + EA EL
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
+ + + YN +I+GLCK G+ + A E+F + R L D TY ++ C
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 354 GKMDKARDLFLDMEAK 369
G + + +F DM ++
Sbjct: 354 GDVVETEKVFSDMRSR 369
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/392 (31%), Positives = 192/392 (48%), Gaps = 44/392 (11%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
GC PNV Y TLI + A+ + +EM E G+ P+ Y ++I GL K
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK----EQGIA--PDIFCYNSLIIGLSKA 500
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
+D+A+ ++M + + PN TY + I G+ A+++ A EM + GV PN V
Sbjct: 501 KRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC 560
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
++NE CK GK+ EA M+ G+ +A Y LM+G +V+ AEE+F M
Sbjct: 561 TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG 620
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
G +VFSY +LING+ K ++ A S++ EM+ +G+ P+V+IYN L G ++E+
Sbjct: 621 KGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEK 680
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
A +L DEM G+ + Y T IDG CK+G + EA LF +++ D Y L+D
Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD 740
Query: 314 GLCKSGRLKIAWELF---------RSLPRGVLI--------------------------- 337
G C+ ++ A +F + P LI
Sbjct: 741 GCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRF 800
Query: 338 --ADVVTYNIMIHALCADGKMDKARDLFLDME 367
+ VTYNIMI LC +G ++ A++LF M+
Sbjct: 801 GKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQ 832
Score = 175 bits (444), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 121/407 (29%), Positives = 190/407 (46%), Gaps = 46/407 (11%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA + +++ G +PN FTY I+G A +EM E GV+ PN V
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMR----ECGVL--PNKV 558
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T +I+ CK+G V +A + M D+ I + TY L++G + ++A+ +F EM
Sbjct: 559 LCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM 618
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+G+ P+V S+ V++N K G M +AS + + M++ G+ PN +YN L+ GFC +G +
Sbjct: 619 RGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEI 678
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+A+EL M G N +Y +I+GYCK+ ++ A L+ EM KG+ PD +Y TL
Sbjct: 679 EKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADT--------W---------------------- 271
G ++ VERA +F + G A+ T W
Sbjct: 739 VDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSF 797
Query: 272 ---------AYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLK 322
Y ID LCK G + A ELF ++ + Y L++G K GR
Sbjct: 798 DRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRA 857
Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ +F + D + Y+++I+A +G KA L M AK
Sbjct: 858 EMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAK 904
Score = 171 bits (433), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 187/397 (47%), Gaps = 29/397 (7%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGN------------ 49
+A +L +++ G + TY+ LI+GL + + A L EM +
Sbjct: 295 DAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCI 354
Query: 50 ---GEFGVVCK--------------PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
+ GV+ K P Y ++I+G C+E V + EL ++MK NI
Sbjct: 355 CVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIV 414
Query: 93 PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
+ TY +++ G C + D + A + EM+ G +PNVV + ++ +N + +A R+
Sbjct: 415 ISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRV 474
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
L+ M + G+ P+ F YN+L+ G R++ A V M G K N F+Y I+GY +
Sbjct: 475 LKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIE 534
Query: 213 NKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWA 272
E A EM G+ P+ V+ L + +V A + M G+ D
Sbjct: 535 ASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKT 594
Query: 273 YRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLP 332
Y ++GL KN + +A E+FR +R D+ +Y LI+G K G ++ A +F +
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654
Query: 333 RGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
L +V+ YN+++ C G+++KA++L +M K
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVK 691
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 173/388 (44%), Gaps = 41/388 (10%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGL--- 70
G P +TY+ LI+GLC+ A +L EM + GV + TY+ +IDGL
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS----LGVSL--DNHTYSLLIDGLLKG 325
Query: 71 --------------------------------CKEGFVDKAKELFLKMKDENINPNVVTY 98
KEG ++KAK LF M + P Y
Sbjct: 326 RNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAY 385
Query: 99 NSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQ 158
SLI G+C + + L +EM + + + ++ ++ +C +G +D A +++ MI
Sbjct: 386 ASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIA 445
Query: 159 IGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEG 218
G RPN +Y TL+ F R A + M+ G ++F Y+ LI G K K ++
Sbjct: 446 SGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDE 505
Query: 219 ALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFID 278
A S EM+ G+KP+ Y G E + A K EM+ GV + I+
Sbjct: 506 ARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN 565
Query: 279 GLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIA 338
CK G ++EA +R++ D + Y L++GL K+ ++ A E+FR + +
Sbjct: 566 EYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAP 625
Query: 339 DVVTYNIMIHALCADGKMDKARDLFLDM 366
DV +Y ++I+ G M KA +F +M
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIFDEM 653
Score = 152 bits (385), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 110/395 (27%), Positives = 177/395 (44%), Gaps = 51/395 (12%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA + + + G + TY L+NGL + A +F EM G G P+
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKG-----IAPDV 627
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
+Y +I+G K G + KA +F +M +E + PNV+ YN L+ GFC + + +AK L E
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M +G+ PN V++ I++ CK+G + EA RL + M G+ P++FVY TL+DG C
Sbjct: 688 MSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLND 747
Query: 181 VNRAEELFVSMESMGC---------------------------------------KHNVF 201
V RA +F GC K N
Sbjct: 748 VERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
+Y+I+I+ CK +E A L+ +M + + P V+ Y +L G ++ + F +FDE
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY-----ELDIRAYNCLIDGLC 316
G+ D Y I+ K G +A+ L + +L I L+ G
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALC 351
K G +++A ++ ++ R I D T +I+ C
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 183/402 (45%), Gaps = 50/402 (12%)
Query: 18 NVFTYNTLINGLCRTGHTIVALNLF--------EEMANGNGEF----GVVCK---PNTVT 62
+V TY+ LI CR G+ + ++ N +G ++CK P T
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYT 279
Query: 63 YTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMM 122
Y +IDGLCK ++ AK L ++M ++ + TY+ LI G + + AK L EM+
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 123 DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G+ ++ + + K G M++A L + MI G+ P A Y +L++G+C V
Sbjct: 340 SHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVR 399
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
+ EL V M+ + ++Y ++ G C + +++GA ++ EM++ G +P+VVIY TL
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCK-------NGYIVEAVELFRT 295
+ + A ++ EM+ G+A D + Y + I GL K ++VE VE
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 296 LRILKYELDIRAY----------------------------NCLIDGLCKSGRLKIAWEL 327
Y I Y LI+ CK G++ A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+RS+ ++ D TY ++++ L + K+D A ++F +M K
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGK 621
Score = 107 bits (266), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 152/348 (43%), Gaps = 20/348 (5%)
Query: 22 YNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKE 81
+ L +G G+ A+ +F + G+ P ++D L + +D +
Sbjct: 154 FGILFDGYIAKGYIEEAVFVF------SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWD 207
Query: 82 LFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELC 141
++ M + N+ +V TY+ LI C A + K + + + + NV
Sbjct: 208 VYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEF---RTATLNV------ 258
Query: 142 KNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVF 201
D A +L E MI G+ P + Y+ L+DG C R+ A+ L V M+S+G +
Sbjct: 259 -----DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNH 313
Query: 202 SYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
+YS+LI+G K + + A L EM+S GI +Y+ + + +E+A LFD M
Sbjct: 314 TYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
G+ AY + I+G C+ + + EL ++ + Y ++ G+C SG L
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDL 433
Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
A+ + + + +VV Y +I + + A + +M+ +
Sbjct: 434 DGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ 481
Score = 100 bits (249), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 118/256 (46%), Gaps = 39/256 (15%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANG------------- 48
EA LF ++++ G P+ F Y TL++G CR A+ +F G
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALIN 774
Query: 49 -------------------NGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE 89
+G F KPN VTY +ID LCKEG ++ AKELF +M++
Sbjct: 775 WVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNA 834
Query: 90 NINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEA 149
N+ P V+TY SL++G+ E +F E + G++P+ + ++VI+N K G +A
Sbjct: 835 NLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 150 SRLLELM-----IQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
L++ M + G + + L+ GF G + AE++ +M + + +
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
Query: 205 ILINGYC--KNKEIEG 218
LIN C N+ +E
Sbjct: 955 ELINESCISSNQRVEA 970
Score = 73.9 bits (180), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 141/354 (39%), Gaps = 36/354 (10%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
E + +++ L LC G AL++ E M N P +++I+ C + F
Sbjct: 94 EQKLDSFSFLALDLCNFGSFEKALSVVERMIERNW-------PVAEVWSSIVR--CSQEF 144
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
V K+ + L + L G+ EA +F M + P + V
Sbjct: 145 VGKSDDGVL-------------FGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKV 191
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
+++ L + ++D + + M++ V + Y+ L+ C G V +++ E
Sbjct: 192 LLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKE- 250
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
F + L ++GAL L M+ KG+ P Y+ L GL +I ++E A
Sbjct: 251 -----FRTATL--------NVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAK 297
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
L EM GV+ D Y IDGL K A L + + Y+C I +
Sbjct: 298 SLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVM 357
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
K G ++ A LF + LI Y +I C + + + +L ++M+ +
Sbjct: 358 SKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKR 411
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 199 bits (505), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 122/367 (33%), Positives = 187/367 (50%), Gaps = 9/367 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEF-GVVCKPNT 60
EA K+ G EP+ +TYNTLI G C+ G +A E G+ F G V P+
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA-----ERIVGDAVFNGFV--PDQ 356
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
TY ++IDGLC EG ++A LF + + I PNV+ YN+LI G EA L E
Sbjct: 357 FTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANE 416
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M ++G+ P V +FN+++N LCK G + +A L+++MI G P+ F +N L+ G+ +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK 476
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ A E+ M G +V++Y+ L+NG CK + E + Y M+ KG P++ +N
Sbjct: 477 MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNI 536
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL-RIL 299
L L +++ A L +EM+ V D + T IDG CKNG + A LFR +
Sbjct: 537 LLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAY 596
Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
K YN +I + + +A +LF+ + L D TY +M+ C G ++
Sbjct: 597 KVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLG 656
Query: 360 RDLFLDM 366
L+M
Sbjct: 657 YKFLLEM 663
Score = 189 bits (479), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/403 (28%), Positives = 194/403 (48%), Gaps = 41/403 (10%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A ++M++R G P+V+++ + C+T AL L M++ C+ N V
Sbjct: 129 QAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG------CEMNVV 182
Query: 62 TYTTIIDG-----------------------------------LCKEGFVDKAKELFLKM 86
Y T++ G LCK+G V + ++L K+
Sbjct: 183 AYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKV 242
Query: 87 KDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
+ PN+ TYN I G C + + A + +++QG +P+V+++N ++ LCKN K
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302
Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
EA L M+ G+ P+++ YNTL+ G+C G V AE + G + F+Y L
Sbjct: 303 QEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSL 362
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
I+G C E AL+L++E L KGIKP+V++YNTL GL + A +L +EM G+
Sbjct: 363 IDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGL 422
Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
+ + ++GLCK G + +A L + + Y DI +N LI G +++ A E
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ + + DV TYN +++ LC K + + + M K
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 109/366 (29%), Positives = 179/366 (48%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
E L K+ G PN+FTYN I GLC+ G A+ + + KP+ +
Sbjct: 234 ECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGP------KPDVI 287
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +I GLCK +A+ KM +E + P+ TYN+LI G+C A+ + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ G P+ ++ +++ LC G+ + A L + G++PN +YNTL+ G G +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A +L M G V +++IL+NG CK + A L M+SKG PD+ +N L
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNIL 467
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G ++E A ++ D M +GV D + Y + ++GLCK + +E ++T+
Sbjct: 468 IHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
++ +N L++ LC+ +L A L + + D VT+ +I C +G +D A
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 362 LFLDME 367
LF ME
Sbjct: 588 LFRKME 593
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/368 (30%), Positives = 184/368 (50%), Gaps = 6/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA +F ++ + CEP VF+YN +++ L +G+ A ++ M + G+ P+
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR----GIT--PDVY 147
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
++T + CK A L M + NVV Y +++ GF N E LF +M
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ GV + +FN ++ LCK G + E +LL+ +I+ GV PN F YN + G C G +
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ A + + G K +V +Y+ LI G CKN + + A +M+++G++PD YNTL
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + V+ A ++ + +G D + YR+ IDGLC G A+ LF
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+ ++ YN LI GL G + A +L + LI +V T+NI+++ LC G + A
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 362 LFLDMEAK 369
L M +K
Sbjct: 448 LVKVMISK 455
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/314 (29%), Positives = 157/314 (50%), Gaps = 9/314 (2%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EAA L ++ G P V T+N L+NGLC+ G A L + M + G F P+
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS-KGYF-----PDI 461
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
T+ +I G + ++ A E+ M D ++P+V TYNSL++G C + + + +
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M+++G PN+ +FN+++ LC+ K+DEA LLE M V P+A + TL+DGFC G
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581
Query: 181 VNRAEELFVSME-SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYN 239
++ A LF ME + + +Y+I+I+ + + + A L+ EM+ + + PD Y
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641
Query: 240 TLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
+ G + V +K EM +G I+ LC + EA + R++
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIH--RMV 699
Query: 300 KYELDIRAYNCLID 313
+ L A N + D
Sbjct: 700 QKGLVPEAVNTICD 713
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 150/334 (44%), Gaps = 37/334 (11%)
Query: 72 KEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVV 131
++G V +A +F +M + P V +YN+++ + +++A +++ M D+G+ P+V
Sbjct: 88 RKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVY 147
Query: 132 SFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGF---------------- 175
SF + M CK + A RLL M G N Y T++ GF
Sbjct: 148 SFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKM 207
Query: 176 -------------------CLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEI 216
C G V E+L + G N+F+Y++ I G C+ E+
Sbjct: 208 LASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGEL 267
Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
+GA+ + ++ +G KPDV+ YN L GL + + + A +M G+ D++ Y T
Sbjct: 268 DGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTL 327
Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGV 335
I G CK G + A + + D Y LIDGLC G A LF +L +G+
Sbjct: 328 IAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGI 387
Query: 336 LIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+V+ YN +I L G + +A L +M K
Sbjct: 388 K-PNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Score = 120 bits (302), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 142/285 (49%), Gaps = 20/285 (7%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G +P+V+TYN+L+NGLC+T + ++ M C PN T+ +++ LC+
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG------CAPNLFTFNILLESLCRY 544
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ-GVQPNVVS 132
+D+A L +MK++++NP+ VT+ +LI GFC D + A LF +M + V + +
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPT 604
Query: 133 FNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSME 192
+N+I++ + + A +L + M+ + P+ + Y ++DGFC TG VN + + M
Sbjct: 605 YNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 193 SMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
G ++ + +IN C + A + M+ KG+ P+ V NT + ++ + E
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV--NT----ICDVDKKE 718
Query: 253 -RAFKLFDEMQRHGVAADTWAYRTFIDGL------CKNGYIVEAV 290
A KL E +AY DGL K G+ V A+
Sbjct: 719 VAAPKLVLEDLLKKSCITYYAYELLFDGLRDKRLRKKKGFTVVAI 763
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 3/237 (1%)
Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
G + + ++ ++ +L GK + +L ++ +G VY M + G+V
Sbjct: 35 GFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQE 94
Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
A +F M+ C+ VFSY+ +++ + + A +Y M +GI PDV +
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYEL 303
+ + A +L + M G + AY T + G + + E ELF + L
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 304 DIRAYNCLIDGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
+ +N L+ LCK G +K +L + + RGVL ++ TYN+ I LC G++D A
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVL-PNLFTYNLFIQGLCQRGELDGA 270
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 82/194 (42%), Gaps = 14/194 (7%)
Query: 183 RAEELFVSM-ESMGCKHNVFSYSILING---YCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
+A E+F SM + +G KH + +Y +I Y K + +E L E + + V
Sbjct: 22 KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV--- 78
Query: 239 NTLFIGLFEIH----QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
++G + + +V+ A +F+ M + ++Y + L +GY +A +++
Sbjct: 79 ---YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135
Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
+R D+ ++ + CK+ R A L ++ +VV Y ++ +
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195
Query: 355 KMDKARDLFLDMEA 368
+ +LF M A
Sbjct: 196 FKAEGYELFGKMLA 209
>sp|Q9FMQ1|PP376_ARATH Pentatricopeptide repeat-containing protein At5g12100,
mitochondrial OS=Arabidopsis thaliana GN=At5g12100 PE=2
SV=1
Length = 816
Score = 198 bits (503), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 119/399 (29%), Positives = 202/399 (50%), Gaps = 41/399 (10%)
Query: 6 LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTT 65
LF +++ P+VF YN LI+GLC+ A LF+EM P+ +TY T
Sbjct: 201 LFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM------LARRLLPSLITYNT 254
Query: 66 IIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQG 125
+IDG CK G +K+ ++ +MK ++I P+++T+N+L+ G A +A+ + EM D G
Sbjct: 255 LIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 126 VQPNVVSFNVI-----------------------------------MNELCKNGKMDEAS 150
P+ +F+++ +N LCK GK+++A
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAE 374
Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
+L + G+ PN +YNT++DG+C G + A +ME G K + +Y+ LI +
Sbjct: 375 EILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRF 434
Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
C+ E+E A ++M KG+ P V YN L G ++ ++ F + EM+ +G +
Sbjct: 435 CELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNV 494
Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
+Y T I+ LCK ++EA + R + +R YN LIDG C G+++ A+ +
Sbjct: 495 VSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE 554
Query: 331 LPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ + + ++VTYN +I L GK+ +A DL L++ K
Sbjct: 555 MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK 593
Score = 169 bits (427), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 184/368 (50%), Gaps = 7/368 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A + +++ G P+ FT++ L +G AL ++E + GV K N
Sbjct: 302 DAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS----GV--KMNAY 355
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T + +++ LCKEG ++KA+E+ + + + PN V YN++I G+C D A+ M
Sbjct: 356 TCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
QG++P+ +++N ++ C+ G+M+ A + + M GV P+ YN L+ G+
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
++ ++ ME G NV SY LIN CK ++ A + +M +G+ P V IYN L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G ++E AF+ EM + G+ + Y T IDGL G + EA +L +
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGL 595
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+ D+ YN LI G +G ++ L+ + R + + TY+++I +LC ++
Sbjct: 596 KPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTER 654
Query: 362 LFLDMEAK 369
LF +M K
Sbjct: 655 LFGEMSLK 662
Score = 168 bits (426), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 179/366 (48%), Gaps = 6/366 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EAA LF LR G P+ + L++ L +T V +N+F + + +P+
Sbjct: 127 EAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESD------FRPSKF 180
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
Y I K V K ELF +MK + I P+V YN LI G C N+A+ LF EM
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + + P+++++N +++ CK G +++ ++ E M + P+ +NTL+ G G V
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMV 300
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
AE + M+ +G + F++SIL +GY N++ E AL +Y + G+K + + L
Sbjct: 301 EDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSIL 360
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
L + ++E+A ++ G+ + Y T IDG C+ G +V A +
Sbjct: 361 LNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGM 420
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+ D AYNCLI C+ G ++ A + + + V TYNI+I + DK D
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 362 LFLDME 367
+ +ME
Sbjct: 481 ILKEME 486
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 104/362 (28%), Positives = 182/362 (50%), Gaps = 12/362 (3%)
Query: 9 KLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIID 68
K+++ G P+V TYN LI G R ++ +EM + NG PN V+Y T+I+
Sbjct: 449 KMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED-NGTM-----PNVVSYGTLIN 502
Query: 69 GLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQP 128
LCK + +A+ + M+D ++P V YN LI G C +A EM+ +G++
Sbjct: 503 CLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
N+V++N +++ L GK+ EA LL + + G++P+ F YN+L+ G+ G V R L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
M+ G K + +Y +LI+ C + IE L+ EM +KPD+++YN + + + +
Sbjct: 623 EEMKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFGEM---SLKPDLLVYNGV-LHCYAV 677
Query: 249 H-QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRA 307
H +E+AF L +M + D Y + I G K G + E L + + E +
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737
Query: 308 YNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
YN ++ G C+ A+ +R + + DV N ++ L + + +A + +M
Sbjct: 738 YNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797
Query: 368 AK 369
+
Sbjct: 798 GR 799
Score = 127 bits (318), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 140/289 (48%), Gaps = 6/289 (2%)
Query: 75 FVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFN 134
+ +A +LF +++E I P+ + L+ + +F+ +++ +P+ +
Sbjct: 124 MISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYG 183
Query: 135 VIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
+ K + + L M + P+ F+YN L+DG C R+N AE+LF M +
Sbjct: 184 KAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLAR 243
Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERA 254
++ +Y+ LI+GYCK E + + M + I+P ++ +NTL GLF+ VE A
Sbjct: 244 RLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDA 303
Query: 255 FKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC--LI 312
+ EM+ G D + + DG N A+ ++ T + + + AY C L+
Sbjct: 304 ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYET--AVDSGVKMNAYTCSILL 361
Query: 313 DGLCKSGRLKIAWELF-RSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
+ LCK G+++ A E+ R + +G L+ + V YN MI C G + AR
Sbjct: 362 NALCKEGKIEKAEEILGREMAKG-LVPNEVIYNTMIDGYCRKGDLVGAR 409
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 135/280 (48%), Gaps = 10/280 (3%)
Query: 1 MEAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNT 60
+EA + + G P V YN LI+G C G A +EM E N
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL------NL 564
Query: 61 VTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIE 120
VTY T+IDGL G + +A++L L++ + + P+V TYNSLI G+ +A + L+ E
Sbjct: 565 VTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEE 624
Query: 121 MMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M G++P + +++++++ LC ++ RL ++ ++P+ VYN ++ + + G
Sbjct: 625 MKRSGIKPTLKTYHLLIS-LCTKEGIELTERLFG---EMSLKPDLLVYNGVLHCYAVHGD 680
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ +A L M + +Y+ LI G K ++ SL EM ++ ++P+ YN
Sbjct: 681 MEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNI 740
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGL 280
+ G E+ A+ + EMQ G D + GL
Sbjct: 741 IVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGL 780
Score = 112 bits (280), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 137/277 (49%), Gaps = 9/277 (3%)
Query: 96 VTYNSLIHGFCY---------ANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKM 146
++ SL H F Y + +EA LF + ++G+ P+ S ++++ L K +
Sbjct: 101 LSSPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQF 160
Query: 147 DEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
+ +++ RP+ F+Y + V + ELF M+ +VF Y++L
Sbjct: 161 RVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVL 220
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
I+G CK K + A L+ EML++ + P ++ YNTL G + E++FK+ + M+ +
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI 280
Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
+ T + GL K G + +A + + ++ L + D ++ L DG + + + A
Sbjct: 281 EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALG 340
Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLF 363
++ + + + T +I+++ALC +GK++KA ++
Sbjct: 341 VYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Score = 75.1 bits (183), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 92/187 (49%)
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
++ A +LF ++ + G + S ++L++ K K+ ++++ +L +P +Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK 300
++ V + +LF+ M+ + + Y IDGLCK + +A +LF + +
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244
Query: 301 YELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKAR 360
+ YN LIDG CK+G + ++++ + + ++T+N ++ L G ++ A
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 361 DLFLDME 367
++ +M+
Sbjct: 305 NVLKEMK 311
Score = 62.8 bits (151), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 9/181 (4%)
Query: 184 AEELF--VSMESMGCKHNVFSY---SILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIY 238
+ELF S+ S KH+ FSY S+L+N ++K I A L+ + ++GI P
Sbjct: 92 PKELFSAFSLSSPSLKHD-FSYLLLSVLLN---ESKMISEAADLFFALRNEGIYPSSDSL 147
Query: 239 NTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRI 298
L L + Q +F + + Y I K + + +ELF ++
Sbjct: 148 TLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKH 207
Query: 299 LKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDK 358
+ + YN LIDGLCK R+ A +LF + L+ ++TYN +I C G +K
Sbjct: 208 DRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEK 267
Query: 359 A 359
+
Sbjct: 268 S 268
>sp|Q9ZUA2|PP141_ARATH Pentatricopeptide repeat-containing protein At2g01740
OS=Arabidopsis thaliana GN=At2g01740 PE=3 SV=1
Length = 559
Score = 197 bits (501), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 118/378 (31%), Positives = 184/378 (48%), Gaps = 36/378 (9%)
Query: 13 FGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNG---------------------- 50
FGCEP+V +YN+LI+G CR G A + E + +G
Sbjct: 85 FGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKM 144
Query: 51 ------EFGVV---CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSL 101
GV+ C PN VTY+T ID CK G + A + F MK + ++PNVVT+ L
Sbjct: 145 LDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204
Query: 102 IHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV 161
I G+C A D A L+ EM + NVV++ +++ CK G+M A + M++ V
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRV 264
Query: 162 RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALS 221
PN+ VY T++DGF G + A + M + G + ++ +Y ++I+G C N +++ A
Sbjct: 265 EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE 324
Query: 222 LYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLC 281
+ +M + PD+VI+ T+ F+ +++ A ++ ++ G D A T IDG+
Sbjct: 325 IVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIA 384
Query: 282 KNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVV 341
KNG + EA+ F ++ D+ Y LID LCK G LF + L+ D
Sbjct: 385 KNGQLHEAIVYF----CIEKANDV-MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKF 439
Query: 342 TYNIMIHALCADGKMDKA 359
Y I LC G + A
Sbjct: 440 MYTSWIAGLCKQGNLVDA 457
Score = 173 bits (439), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 182/349 (52%), Gaps = 10/349 (2%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G P+ ++N++++ +C+ G A E++ + FG C+P+ ++Y ++IDG C+
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFA----EDIVHSMPRFG--CEPDVISYNSLIDGHCRN 104
Query: 74 GFVDKAKELFLKMKDEN---INPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNV 130
G + A + ++ + P++V++NSL +GF +E +++ +M + PNV
Sbjct: 105 GDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNV 163
Query: 131 VSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVS 190
V+++ ++ CK+G++ A + M + + PN + L+DG+C G + A L+
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 191 MESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQ 250
M + NV +Y+ LI+G+CK E++ A +YS M+ ++P+ ++Y T+ G F+
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGD 283
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
+ A K +M G+ D AY I GLC NG + EA E+ + D+ +
Sbjct: 284 SDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTT 343
Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
+++ KSGR+K A ++ L DVV + MI + +G++ +A
Sbjct: 344 MMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEA 392
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 180/364 (49%), Gaps = 36/364 (9%)
Query: 7 FMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTI 66
F ++ PNV T+ LI+G C+ G VA++L++EM V N VTYT +
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRR------VRMSLNVVTYTAL 239
Query: 67 IDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGV 126
IDG CK+G + +A+E++ +M ++ + PN + Y ++I GF D + A +M++QG+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 127 QPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEE 186
+ ++ ++ VI++ LC NGK+ EA+ ++E M + + P+ ++ T+M+ + +GR+ A
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 187 LFVSMESMGCKHNVFS------------------------------YSILINGYCKNKEI 216
++ + G + +V + Y++LI+ CK +
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDF 419
Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
L+S++ G+ PD +Y + GL + + AFKL M + G+ D AY T
Sbjct: 420 IEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTL 479
Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
I GL G +VEA ++F + D ++ LI K G + A +L + R L
Sbjct: 480 IYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGL 539
Query: 337 IADV 340
+ V
Sbjct: 540 VTAV 543
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/366 (29%), Positives = 182/366 (49%), Gaps = 12/366 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA +LR P+ FT N I+ L + I++L + + P+
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRG------YTPHRS 57
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
++ +++ +CK G V A+++ M P+V++YNSLI G C D A L +E
Sbjct: 58 SFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS-LVLES 116
Query: 122 MDQG----VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
+ +P++VSFN + N K +DE + +M++ PN Y+T +D FC
Sbjct: 117 LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC-CSPNVVTYSTWIDTFCK 175
Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
+G + A + F SM+ NV +++ LI+GYCK ++E A+SLY EM + +VV
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
Y L G + +++RA +++ M V ++ Y T IDG + G A++ +
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKML 295
Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
LDI AY +I GLC +G+LK A E+ + + L+ D+V + M++A G+M
Sbjct: 296 NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMK 355
Query: 358 KARDLF 363
A +++
Sbjct: 356 AAVNMY 361
Score = 128 bits (322), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 142/281 (50%), Gaps = 8/281 (2%)
Query: 92 NPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASR 151
P+ ++NS++ C A+ + M G +P+V+S+N +++ C+NG + AS
Sbjct: 53 TPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 152 LLE-LMIQIGV--RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM--GCKHNVFSYSIL 206
+LE L G +P+ +N+L +GF ++ +E+FV M M C NV +YS
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGF---SKMKMLDEVFVYMGVMLKCCSPNVVTYSTW 169
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
I+ +CK+ E++ AL + M + P+VV + L G + +E A L+ EM+R +
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
+ + Y IDG CK G + A E++ + + E + Y +IDG + G A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 327 LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
+ + D+ Y ++I LC +GK+ +A ++ DME
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDME 330
Score = 87.4 bits (215), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 1 MEAAA-LFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPN 59
M+AA ++ KL G EP+V +T+I+G+ + G A+ F + K N
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-----------CIEKAN 402
Query: 60 TVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFI 119
V YT +ID LCKEG + + LF K+ + + P+ Y S I G C + +A L
Sbjct: 403 DVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKT 462
Query: 120 EMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTG 179
M+ +G+ +++++ ++ L G M EA ++ + M+ G+ P++ V++ L+ + G
Sbjct: 463 RMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEG 522
Query: 180 RVNRAEELFVSMESMG 195
+ A +L + M+ G
Sbjct: 523 NMAAASDLLLDMQRRG 538
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 251 VERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNC 310
V A + +++ D + I L + + +++ L Y ++N
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 311 LIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
++ +CK G++K A ++ S+PR DV++YN +I C +G + A
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 197 bits (501), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 185/351 (52%), Gaps = 6/351 (1%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
+P+V TY TL+ GLC+ + L + +EM + P+ +++++GL K G
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEM------LCLRFSPSEAAVSSLVEGLRKRGK 347
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+++A L ++ D ++PN+ YN+LI C ++EA+ LF M G++PN V++++
Sbjct: 348 IEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSI 407
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
+++ C+ GK+D A L M+ G++ + + YN+L++G C G ++ AE M +
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
+ V +Y+ L+ GYC +I AL LY EM KGI P + + TL GLF + A
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
KLF+EM V + Y I+G C+ G + +A E + + D +Y LI GL
Sbjct: 528 KLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGL 587
Query: 316 CKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
C +G+ A L +G + + Y ++H C +GK+++A + +M
Sbjct: 588 CLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEM 638
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 174/358 (48%), Gaps = 6/358 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA L ++ FG PN+F YN LI+ LC+ A LF+ M G+ G+ +PN V
Sbjct: 350 EALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM----GKIGL--RPNDV 403
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY+ +ID C+ G +D A +M D + +V YNSLI+G C D + A+ EM
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+++ ++P VV++ +M C GK+++A RL M G+ P+ + + TL+ G G +
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A +LF M K N +Y+++I GYC+ ++ A EM KGI PD Y L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GL Q A D + + + Y + G C+ G + EA+ + + +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKA 359
+LD+ Y LIDG K K+ + L + + L D V Y MI A G +A
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Score = 185 bits (469), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 110/352 (31%), Positives = 182/352 (51%), Gaps = 8/352 (2%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
EP V TY +L+ G C G AL L+ EM G G P+ T+TT++ GL + G
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMT-GKG-----IAPSIYTFTTLLSGLFRAGL 522
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
+ A +LF +M + N+ PN VTYN +I G+C D ++A EM ++G+ P+ S+
Sbjct: 523 IRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMG 195
+++ LC G+ EA ++ + + N Y L+ GFC G++ A + M G
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 196 CKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAF 255
++ Y +LI+G K+K+ + L EM +G+KPD VIY ++ + + AF
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAF 702
Query: 256 KLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGL 315
++D M G + Y I+GLCK G++ EA L ++ + + Y C +D L
Sbjct: 703 GIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDIL 762
Query: 316 CKSG-RLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
K ++ A EL ++ +G L+A+ TYN++I C G++++A +L M
Sbjct: 763 TKGEVDMQKAVELHNAILKG-LLANTATYNMLIRGFCRQGRIEEASELITRM 813
Score = 185 bits (469), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 198/417 (47%), Gaps = 73/417 (17%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGE------FGVV--------------- 55
P V T + L++GL + H +A+ LF +M + GV+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 56 --------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCY 107
C N V Y +IDGLCK+ V +A + + +++ P+VVTY +L++G C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 108 ANDWNEAKCLFIEMMDQ---------------------------------------GVQP 128
++ + +EMMD+ GV P
Sbjct: 310 VQEFE----IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 129 NVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELF 188
N+ +N +++ LCK K EA L + M +IG+RPN Y+ L+D FC G+++ A
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 189 VSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEI 248
M G K +V+ Y+ LING+CK +I A +EM++K ++P VV Y +L G
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 249 HQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAY 308
++ +A +L+ EM G+A + + T + GL + G I +AV+LF + + + Y
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 309 NCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLD 365
N +I+G C+ G + A+E + + ++ D +Y +IH LC G+ +A+ +F+D
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVD 601
Score = 181 bits (460), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/467 (27%), Positives = 207/467 (44%), Gaps = 99/467 (21%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMA--------------- 46
EA LF ++ G PN TY+ LI+ CR G AL+ EM
Sbjct: 385 EAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLI 444
Query: 47 NGNGEFGVVC--------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
NG+ +FG + +P VTYT+++ G C +G ++KA L+ +M + I
Sbjct: 445 NGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIA 504
Query: 93 PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRL 152
P++ T+ +L+ G A +A LF EM + V+PN V++NV++ C+ G M +A
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 153 LELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCK 212
L+ M + G+ P+ + Y L+ G CLTG+ + A+ + C+ N Y+ L++G+C+
Sbjct: 565 LKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCR 624
Query: 213 NKEIEGALSLYSEMLSKGI-----------------------------------KPDVVI 237
++E ALS+ EM+ +G+ KPD VI
Sbjct: 625 EGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVI 684
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
Y ++ + + AF ++D M G + Y I+GLCK G++ EA L ++
Sbjct: 685 YTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Query: 298 -----------------ILKYELDIR------------------AYNCLIDGLCKSGRLK 322
+ K E+D++ YN LI G C+ GR++
Sbjct: 745 PVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIE 804
Query: 323 IAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
A EL + + D +TY MI+ LC + KA +L+ M K
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 196/403 (48%), Gaps = 47/403 (11%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A L+ ++ G P+++T+ TL++GL R G A+ LF EMA N KPN V
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN------VKPNRV 543
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY +I+G C+EG + KA E +M ++ I P+ +Y LIHG C +EAK +F++
Sbjct: 544 TYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK-VFVDG 602
Query: 122 MDQG-VQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGV------------------- 161
+ +G + N + + +++ C+ GK++EA + + M+Q GV
Sbjct: 603 LHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Query: 162 ----------------RPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSI 205
+P+ +Y +++D TG A ++ M + GC N +Y+
Sbjct: 663 RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTA 722
Query: 206 LINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV--ERAFKLFDEMQR 263
+ING CK + A L S+M P+ V Y F+ + +V ++A +L + + +
Sbjct: 723 VINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGC-FLDILTKGEVDMQKAVELHNAILK 781
Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
G+ A+T Y I G C+ G I EA EL + D Y +I+ LC+ +K
Sbjct: 782 -GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
A EL+ S+ + D V YN +IH C G+M KA +L +M
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 149 bits (377), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 162/327 (49%), Gaps = 8/327 (2%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G P+ ++Y LI+GLC TG A + + GN C+ N + YT ++ G C+E
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN------CELNEICYTGLLHGFCRE 625
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
G +++A + +M ++ ++V Y LI G D L EM D+G++P+ V +
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
+++ K G EA + +LMI G PN Y +++G C G VN AE L M+
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQP 745
Query: 194 MGCKHNVFSYSILINGYCKNK-EIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVE 252
+ N +Y ++ K + +++ A+ L++ +L KG+ + YN L G ++E
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIE 804
Query: 253 RAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLI 312
A +L M GV+ D Y T I+ LC+ + +A+EL+ ++ D AYN LI
Sbjct: 805 EASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLI 864
Query: 313 DGLCKSGRLKIAWELFRSLPRGVLIAD 339
G C +G + A EL + R LI +
Sbjct: 865 HGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 137 bits (346), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 143/304 (47%), Gaps = 31/304 (10%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVC----- 56
EA L CE N Y L++G CR G AL++ +EM + +VC
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 57 ------------------------KPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENIN 92
KP+ V YT++ID K G +A ++ M +E
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 93 PNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMD-EASR 151
PN VTY ++I+G C A NEA+ L +M PN V++ ++ L K G++D + +
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAV 773
Query: 152 LLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYC 211
L I G+ N YN L+ GFC GR+ A EL M G + +Y+ +IN C
Sbjct: 774 ELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 212 KNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTW 271
+ +++ A+ L++ M KGI+PD V YNTL G ++ +A +L +EM R G+ +
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNK 893
Query: 272 AYRT 275
RT
Sbjct: 894 TSRT 897
Score = 134 bits (337), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 143/312 (45%)
Query: 58 PNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCL 117
P T + ++ GL K A ELF M I P+V Y +I C D + AK +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 118 FIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCL 177
M G N+V +NV+++ LCK K+ EA + + + ++P+ Y TL+ G C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 178 TGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVI 237
E+ M + + + S L+ G K +IE AL+L ++ G+ P++ +
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 238 YNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLR 297
YN L L + + A LFD M + G+ + Y ID C+ G + A+ +
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 298 ILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMD 357
+L + YN LI+G CK G + A + L VVTY ++ C+ GK++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 358 KARDLFLDMEAK 369
KA L+ +M K
Sbjct: 490 KALRLYHEMTGK 501
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 113/235 (48%), Gaps = 1/235 (0%)
Query: 133 FNVIMNELCKNGKMDEASRLLELMI-QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM 191
F++++ ++ ++ + + ++MI ++ + P + L+ G A ELF M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 192 ESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQV 251
S+G + +V+ Y+ +I C+ K++ A + + M + G ++V YN L GL + +V
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 252 ERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCL 311
A + ++ + D Y T + GLCK +E+ + L++ A + L
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 312 IDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
++GL K G+++ A L + + + ++ YN +I +LC K +A LF M
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRM 393
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 53/210 (25%)
Query: 195 GCKHNVFSYSILING--------------------------------------------- 209
G H+ S+ ILI+
Sbjct: 99 GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSSS 158
Query: 210 -------YCKNKEIEGALSLYSEMLSK-GIKPDVVIYNTLFIGLFEIHQVERAFKLFDEM 261
Y +++ + + ++ M++K + P+V + L GL + A +LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 262 QRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRL 321
G+ D + Y I LC+ + A E+ + +++I YN LIDGLCK ++
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 322 KIAWELFRSLPRGVLIADVVTYNIMIHALC 351
A + + L L DVVTY +++ LC
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308
>sp|Q9SIC9|PP178_ARATH Pentatricopeptide repeat-containing protein At2g31400,
chloroplastic OS=Arabidopsis thaliana GN=At2g31400 PE=2
SV=1
Length = 918
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 117/344 (34%), Positives = 182/344 (52%), Gaps = 7/344 (2%)
Query: 19 VFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF-VD 77
V+ ++ LI+ R+G A+++F M E+G+ +PN VTY +ID K G
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMK----EYGL--RPNLVTYNAVIDACGKGGMEFK 321
Query: 78 KAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIM 137
+ + F +M+ + P+ +T+NSL+ W A+ LF EM ++ ++ +V S+N ++
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLL 381
Query: 138 NELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCK 197
+ +CK G+MD A +L M + PN Y+T++DGF GR + A LF M +G
Sbjct: 382 DAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 198 HNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKL 257
+ SY+ L++ Y K E AL + EM S GIK DVV YN L G + + + K+
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 258 FDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCK 317
F EM+R V + Y T IDG K G EA+E+FR + D+ Y+ LID LCK
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 318 SGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+G + A L + + + +VVTYN +I A MD++ D
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 157 bits (398), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 157/290 (54%), Gaps = 6/290 (2%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+ A F +++ G +P+ T+N+L+ R G A NLF+EM N E V
Sbjct: 322 QVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDV------F 375
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+Y T++D +CK G +D A E+ +M + I PNVV+Y+++I GF A ++EA LF EM
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
G+ + VS+N +++ K G+ +EA +L M +G++ + YN L+ G+ G+
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKY 495
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ +++F M+ N+ +YS LI+GY K + A+ ++ E S G++ DVV+Y+ L
Sbjct: 496 DEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSAL 555
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVE 291
L + V A L DEM + G++ + Y + ID ++ + + +
Sbjct: 556 IDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 155 bits (391), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 162/320 (50%), Gaps = 5/320 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA ++F ++ +G PN+ TYN +I+ + G + F + NG +P+ +
Sbjct: 286 EAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNG-----VQPDRI 340
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
T+ +++ + G + A+ LF +M + I +V +YN+L+ C + A + +M
Sbjct: 341 TFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQM 400
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+ + PNVVS++ +++ K G+ DEA L M +G+ + YNTL+ + GR
Sbjct: 401 PVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRS 460
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A ++ M S+G K +V +Y+ L+ GY K + + +++EM + + P+++ Y+TL
Sbjct: 461 EEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTL 520
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
G + + A ++F E + G+ AD Y ID LCKNG + AV L +
Sbjct: 521 IDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Query: 302 ELDIRAYNCLIDGLCKSGRL 321
++ YN +ID +S +
Sbjct: 581 SPNVVTYNSIIDAFGRSATM 600
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 157/339 (46%), Gaps = 36/339 (10%)
Query: 64 TTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMD 123
+ +I L + G V AK +F V +++LI + + EA +F M +
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 124 QGVQPNVVSFNVIMNELCKNG-KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVN 182
G++PN+V++N +++ K G + + ++ + M + GV+P+ +N+L+ G
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 183 RAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF 242
A LF M + + +VFSY+ L++ CK +++ A + ++M K I P+VV Y+T+
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 243 IGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYE 302
G + + + A LF EM+ G+A D +Y T + K G EA+++ R + + +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 303 LDIRAYNC-----------------------------------LIDGLCKSGRLKIAWEL 327
D+ YN LIDG K G K A E+
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 328 FRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDM 366
FR L ADVV Y+ +I ALC +G + A L +M
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 105/240 (43%), Gaps = 44/240 (18%)
Query: 136 IMNELCKNGKMDEASRLLELMIQIGVRPN--AFVYNTLMDGFCLTGRVNRAEELFVSMES 193
I+ EL + D+A E ++ R N + + ++ G+V A+ +F + +
Sbjct: 202 IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFA 261
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLF----IGLFEIH 249
G + V+++S LI+ Y ++ E A+S+++ M G++P++V YN + G E
Sbjct: 262 GGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFK 321
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
QV K FDEMQR+GV D + + + +C G + EA
Sbjct: 322 QVA---KFFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEA-------------------- 357
Query: 310 CLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
A LF + + DV +YN ++ A+C G+MD A ++ M K
Sbjct: 358 --------------ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 76/174 (43%), Gaps = 27/174 (15%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA +F + + G +V Y+ LI+ LC+ G A++L +EM PN V
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEG------ISPNVV 585
Query: 62 TYTTIIDGLCKEGFVDKAKEL----FLKMKDENINPNVVTY-NSLIHGF----CYANDWN 112
TY +IID + +D++ + L ++ T N +I F +N+
Sbjct: 586 TYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRT 645
Query: 113 EAKC------------LFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLE 154
C +F +M ++PNVV+F+ I+N + ++AS LLE
Sbjct: 646 TKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE 699
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850,
chloroplastic OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 195 bits (495), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 188/365 (51%), Gaps = 6/365 (1%)
Query: 5 ALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYT 64
L ++ G +PNV+T+ I L R G A + + M + C P+ VTYT
Sbjct: 244 GLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEG------CGPDVVTYT 297
Query: 65 TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
+ID LC +D AKE+F KMK P+ VTY +L+ F D + K + EM
Sbjct: 298 VLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKD 357
Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRA 184
G P+VV+F ++++ LCK G EA L++M G+ PN YNTL+ G R++ A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 185 EELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIG 244
ELF +MES+G K ++Y + I+ Y K+ + AL + +M +KGI P++V N
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 245 LFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELD 304
L + + A ++F ++ G+ D+ Y + K G I EA++L + E D
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 305 IRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFL 364
+ N LI+ L K+ R+ AW++F + L VVTYN ++ L +GK+ +A +LF
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 365 DMEAK 369
M K
Sbjct: 598 GMVQK 602
Score = 181 bits (459), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 164/296 (55%), Gaps = 8/296 (2%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A +F++++ GC P+V TYN L++ ++G L++EM+ C+ NT+T
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHE------CEANTIT 857
Query: 63 YTTIIDGLCKEGFVDKAKELFLK-MKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+ +I GL K G VD A +L+ M D + +P TY LI G + EAK LF M
Sbjct: 858 HNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGM 917
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
+D G +PN +N+++N K G+ D A L + M++ GVRP+ Y+ L+D C+ GRV
Sbjct: 918 LDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRV 977
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEM-LSKGIKPDVVIYNT 240
+ F ++ G +V Y+++ING K+ +E AL L++EM S+GI PD+ YN+
Sbjct: 978 DEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNS 1037
Query: 241 LFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTL 296
L + L VE A K+++E+QR G+ + + + I G +G A +++T+
Sbjct: 1038 LILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/402 (28%), Positives = 195/402 (48%), Gaps = 43/402 (10%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA + ++ GC P+V TY LI+ LC A +FE+M G KP+ V
Sbjct: 276 EAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH------KPDRV 329
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY T++D +D K+ + +M+ + P+VVT+ L+ C A ++ EA M
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMD-------- 173
DQG+ PN+ ++N ++ L + ++D+A L M +GV+P A+ Y +D
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 174 ---------------------------GFCLTGRVNRAEELFVSMESMGCKHNVFSYSIL 206
GR A+++F ++ +G + +Y+++
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 207 INGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGV 266
+ Y K EI+ A+ L SEM+ G +PDV++ N+L L++ +V+ A+K+F M+ +
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Query: 267 AADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWE 326
Y T + GL KNG I EA+ELF + + +N L D LCK+ + +A +
Sbjct: 570 KPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALK 629
Query: 327 -LFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDME 367
LF+ + G + DV TYN +I L +G++ +A F M+
Sbjct: 630 MLFKMMDMGC-VPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK 670
Score = 174 bits (440), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 112/318 (35%), Positives = 170/318 (53%), Gaps = 7/318 (2%)
Query: 10 LRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDG 69
+R G PN+ TYNTLI GL R AL LF M + GV KP TY ID
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES----LGV--KPTAYTYIVFIDY 442
Query: 70 LCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPN 129
K G A E F KMK + I PN+V N+ ++ A EAK +F + D G+ P+
Sbjct: 443 YGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPD 502
Query: 130 VVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFV 189
V++N++M K G++DEA +LL M++ G P+ V N+L++ RV+ A ++F+
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 190 SMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIH 249
M+ M K V +Y+ L+ G KN +I+ A+ L+ M+ KG P+ + +NTLF L +
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKND 622
Query: 250 QVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYN 309
+V A K+ +M G D + Y T I GL KNG + EA+ F ++ L Y D
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLC 681
Query: 310 CLIDGLCKSGRLKIAWEL 327
L+ G+ K+ ++ A+++
Sbjct: 682 TLLPGVVKASLIEDAYKI 699
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 180/344 (52%), Gaps = 9/344 (2%)
Query: 3 AAALFMKL-RVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
A LF K + G +P + TYN LI GL +A ++F ++ + C P+
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG------CIPDVA 821
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY ++D K G +D+ EL+ +M N +T+N +I G A + ++A L+ ++
Sbjct: 822 TYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDL 881
Query: 122 M-DQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
M D+ P ++ +++ L K+G++ EA +L E M+ G RPN +YN L++GF G
Sbjct: 882 MSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGE 941
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNT 240
+ A LF M G + ++ +YS+L++ C ++ L + E+ G+ PDVV YN
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 241 LFIGLFEIHQVERAFKLFDEMQ-RHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRIL 299
+ GL + H++E A LF+EM+ G+ D + Y + I L G + EA +++ ++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 300 KYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTY 343
E ++ +N LI G SG+ + A+ +++++ G + TY
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 168 bits (425), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 109/365 (29%), Positives = 181/365 (49%), Gaps = 6/365 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A K+R FG N ++YN LI+ L ++ A+ ++ M +P+
Sbjct: 171 QAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG------FRPSLQ 224
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY++++ GL K +D L +M+ + PNV T+ I A NEA + M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
D+G P+VV++ V+++ LC K+D A + E M +P+ Y TL+D F +
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
+ ++ + ME G +V +++IL++ CK A M +GI P++ YNTL
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GL +H+++ A +LF M+ GV + Y FID K+G V A+E F ++
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
+I A N + L K+GR + A ++F L L+ D VTYN+M+ G++D+A
Sbjct: 465 APNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIK 524
Query: 362 LFLDM 366
L +M
Sbjct: 525 LLSEM 529
Score = 165 bits (417), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 184/364 (50%), Gaps = 22/364 (6%)
Query: 20 FTYNTLINGLCRTGHTIV---------------ALNLFEEMANGNGEFGVVCKPNTVTYT 64
F+ + NG+CR G +I+ A LFE+ + GV +P TY
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTK---DLGV--QPKLPTYN 789
Query: 65 TIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQ 124
+I GL + ++ A+++FL++K P+V TYN L+ + + +E L+ EM
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTH 849
Query: 125 GVQPNVVSFNVIMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNR 183
+ N ++ N++++ L K G +D+A L +LM P A Y L+DG +GR+
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 184 AEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFI 243
A++LF M GC+ N Y+ILING+ K E + A +L+ M+ +G++PD+ Y+ L
Sbjct: 910 AKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVD 969
Query: 244 GLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILK-YE 302
L + +V+ F E++ G+ D Y I+GL K+ + EA+ LF ++ +
Sbjct: 970 CLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGIT 1029
Query: 303 LDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDL 362
D+ YN LI L +G ++ A +++ + R L +V T+N +I GK + A +
Sbjct: 1030 PDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAV 1089
Query: 363 FLDM 366
+ M
Sbjct: 1090 YQTM 1093
Score = 153 bits (386), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 167/329 (50%), Gaps = 7/329 (2%)
Query: 14 GCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKE 73
G P+V T+ L++ LC+ G+ A + + M + G++ PN TY T+I GL +
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ----GIL--PNLHTYNTLICGLLRV 411
Query: 74 GFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSF 133
+D A ELF M+ + P TY I + + D A F +M +G+ PN+V+
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471
Query: 134 NVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMES 193
N + L K G+ EA ++ + IG+ P++ YN +M + G ++ A +L M
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531
Query: 194 MGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVER 253
GC+ +V + LIN K ++ A ++ M +KP VV YNTL GL + +++
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591
Query: 254 AFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLID 313
A +LF+ M + G +T + T D LCKN + A+++ + + D+ YN +I
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Query: 314 GLCKSGRLKIAWELFRSLPRGVLIADVVT 342
GL K+G++K A F + + ++ D VT
Sbjct: 652 GLVKNGQVKEAMCFFHQMKK-LVYPDFVT 679
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/415 (26%), Positives = 187/415 (45%), Gaps = 65/415 (15%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A LF + G +P +TY I+ ++G ++ AL FE+M G+ PN V
Sbjct: 416 DALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK----GIA--PNIV 469
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+ L K G +AK++F +KD + P+ VTYN ++ + + +EA L EM
Sbjct: 470 ACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
M+ G +P+V+ N ++N L K ++DEA ++ M ++ ++P YNTL+ G G++
Sbjct: 530 MENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKI 589
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A ELF M GC N +++ L + CKN E+ AL + +M+ G PDV YNT+
Sbjct: 590 QEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTI 649
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GL + QV+ A F +M++ V D T + G+ K I +A ++
Sbjct: 650 IFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKASLIEDAYKIITNF----- 703
Query: 302 ELDIRAYNC--------------------------------LIDGLCKSG---------- 319
YNC + +G+C+ G
Sbjct: 704 -----LYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 320 -----RLKIAWELFRSLPRGVLI-ADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
+ A LF + + + + TYN++I L ++ A+D+FL +++
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813
Score = 142 bits (358), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/405 (25%), Positives = 186/405 (45%), Gaps = 46/405 (11%)
Query: 3 AAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVT 62
A + K+ GC P+VFTYNT+I GL + G A+ F +M + P+ VT
Sbjct: 627 ALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKK-------LVYPDFVT 679
Query: 63 YTTIIDGLCKEGFVDKAKELFLKM----KDENIN----------------PNVVTYN--- 99
T++ G+ K ++ A ++ D+ N N V+++
Sbjct: 680 LCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERL 739
Query: 100 --------------SLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNG 144
+I C N+ + A+ LF + D GVQP + ++N+++ L +
Sbjct: 740 VANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEAD 799
Query: 145 KMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYS 204
++ A + + G P+ YN L+D + +G+++ EL+ M + C+ N +++
Sbjct: 800 MIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHN 859
Query: 205 ILINGYCKNKEIEGALSLYSEMLS-KGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQR 263
I+I+G K ++ AL LY +++S + P Y L GL + ++ A +LF+ M
Sbjct: 860 IVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 264 HGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKI 323
+G + Y I+G K G A LF+ + D++ Y+ L+D LC GR+
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 324 AWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
F+ L L DVV YN++I+ L ++++A LF +M+
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 150/315 (47%)
Query: 55 VCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEA 114
+ K +T TY TI L +G + +A KM++ N +YN LIH + EA
Sbjct: 148 IIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEA 207
Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
++ M+ +G +P++ +++ +M L K +D LL+ M +G++PN + + +
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPD 234
G++N A E+ M+ GC +V +Y++LI+ C ++++ A ++ +M + KPD
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 235 VVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFR 294
V Y TL + ++ + + EM++ G D + +D LCK G EA +
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 295 TLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADG 354
+R ++ YN LI GL + RL A ELF ++ + TY + I G
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 355 KMDKARDLFLDMEAK 369
A + F M+ K
Sbjct: 448 DSVSALETFEKMKTK 462
Score = 130 bits (326), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 7/227 (3%)
Query: 16 EPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGF 75
P TY LI+GL ++G A LFE M ++G C+PN Y +I+G K G
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGML----DYG--CRPNCAIYNILINGFGKAGE 941
Query: 76 VDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNV 135
D A LF +M E + P++ TY+ L+ C +E F E+ + G+ P+VV +N+
Sbjct: 942 ADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNL 1001
Query: 136 IMNELCKNGKMDEASRLL-ELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESM 194
I+N L K+ +++EA L E+ G+ P+ + YN+L+ + G V A +++ ++
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061
Query: 195 GCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
G + NVF+++ LI GY + + E A ++Y M++ G P+ Y L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 7/208 (3%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
EA LF + +GC PN YN LING + G A LF+ M + GV +P+
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMV----KEGV--RPDLK 962
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
TY+ ++D LC G VD+ F ++K+ +NP+VV YN +I+G ++ EA LF EM
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEM 1022
Query: 122 -MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGR 180
+G+ P++ ++N ++ L G ++EA ++ + + G+ PN F +N L+ G+ L+G+
Sbjct: 1023 KTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Query: 181 VNRAEELFVSMESMGCKHNVFSYSILIN 208
A ++ +M + G N +Y L N
Sbjct: 1083 PEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 194 bits (494), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 113/353 (32%), Positives = 191/353 (54%), Gaps = 7/353 (1%)
Query: 17 PNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFV 76
PNV T+N +I+GL + G L ++E M E + TY+++I GLC G V
Sbjct: 253 PNVKTHNIMISGLSKCGRVDDCLKIWERMKQNERE------KDLYTYSSLIHGLCDAGNV 306
Query: 77 DKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVI 136
DKA+ +F ++ + + +VVTYN+++ GFC E+ L+ +M+ N+VS+N++
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNIL 365
Query: 137 MNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGC 196
+ L +NGK+DEA+ + LM G + Y + G C+ G VN+A + +ES G
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGG 425
Query: 197 KHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFK 256
+V++Y+ +I+ CK K +E A +L EM G++ + + N L GL ++ A
Sbjct: 426 HLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASF 485
Query: 257 LFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLC 316
EM ++G +Y I GLCK G EA + + ++ D++ Y+ L+ GLC
Sbjct: 486 FLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 317 KSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARDLFLDMEAK 369
+ ++ +A EL+ + L DV+ +NI+IH LC+ GK+D A + +ME +
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHR 598
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 126/431 (29%), Positives = 205/431 (47%), Gaps = 67/431 (15%)
Query: 2 EAAALFMKLR-VFGCEPNVFTYNTLINGLCRTGHTIVALNLFE----------------- 43
+A +F ++R +FGCEP + +YNTL+N + +LF
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 44 -EMANGNGEFGVV-----------CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENI 91
+M+ EF KP+ +Y+T+I+ L K G +D A ELF +M + +
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGV 215
Query: 92 NPNVVTYNSLIHGFCYANDWNEAKCLFIEMM-DQGVQPNVVSFNVIMNELCKNGKMDEAS 150
P+V YN LI GF D A L+ ++ D V PNV + N++++ L K G++D+
Sbjct: 216 APDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCL 275
Query: 151 RLLELMIQIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGY 210
++ E M Q + + Y++L+ G C G V++AE +F ++ +V +Y+ ++ G+
Sbjct: 276 KIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGF 335
Query: 211 CKNKEIEGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADT 270
C+ +I+ +L L+ M K ++V YN L GL E +++ A ++ M G AAD
Sbjct: 336 CRCGKIKESLELWRIMEHKN-SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 271 WAYRTFIDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRS 330
Y FI GLC NGY+ +A+ + + + LD+ AY +ID LCK RL+ A L +
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 331 LPR--------------GVLIAD---------------------VVTYNIMIHALCADGK 355
+ + G LI D VV+YNI+I LC GK
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGK 514
Query: 356 MDKARDLFLDM 366
+A +M
Sbjct: 515 FGEASAFVKEM 525
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 175/316 (55%), Gaps = 3/316 (0%)
Query: 56 CKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDE-NINPNVVTYNSLIHGFCYANDWNEA 114
CK + ++I K D+A ++F +M++ P + +YN+L++ F A W +
Sbjct: 74 CKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKV 133
Query: 115 KCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDG 174
+ LF GV PN+ ++NV++ CK + ++A L+ M + G +P+ F Y+T+++
Sbjct: 134 ESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVIND 193
Query: 175 FCLTGRVNRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEML-SKGIKP 233
G+++ A ELF M G +V Y+ILI+G+ K K+ + A+ L+ +L + P
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP 253
Query: 234 DVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELF 293
+V +N + GL + +V+ K+++ M+++ D + Y + I GLC G + +A +F
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 294 RTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCAD 353
L K +D+ YN ++ G C+ G++K + EL+R + + ++V+YNI+I L +
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLEN 372
Query: 354 GKMDKARDLFLDMEAK 369
GK+D+A ++ M AK
Sbjct: 373 GKIDEATMIWRLMPAK 388
Score = 168 bits (426), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/332 (30%), Positives = 177/332 (53%), Gaps = 7/332 (2%)
Query: 38 ALNLFEEMANGNGEFGVVCKPNTVTYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVT 97
AL++F+ M G C+P +Y T+++ + K + LF + + PN+ T
Sbjct: 97 ALDVFKRMREIFG-----CEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQT 151
Query: 98 YNSLIHGFCYANDWNEAKCLFIEMMDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMI 157
YN LI C ++ +A+ M +G +P+V S++ ++N+L K GK+D+A L + M
Sbjct: 152 YNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMS 211
Query: 158 QIGVRPNAFVYNTLMDGFCLTGRVNRAEELFVSM-ESMGCKHNVFSYSILINGYCKNKEI 216
+ GV P+ YN L+DGF A EL+ + E NV +++I+I+G K +
Sbjct: 212 ERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV 271
Query: 217 EGALSLYSEMLSKGIKPDVVIYNTLFIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTF 276
+ L ++ M + D+ Y++L GL + V++A +F+E+ + D Y T
Sbjct: 272 DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTM 331
Query: 277 IDGLCKNGYIVEAVELFRTLRILKYELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVL 336
+ G C+ G I E++EL+R + K ++I +YN LI GL ++G++ A ++R +P
Sbjct: 332 LGGFCRCGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGY 390
Query: 337 IADVVTYNIMIHALCADGKMDKARDLFLDMEA 368
AD TY I IH LC +G ++KA + ++E+
Sbjct: 391 AADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 176/364 (48%), Gaps = 7/364 (1%)
Query: 2 EAAALFMKLRVFGCEPNVFTYNTLINGLCRTGHTIVALNLFEEMANGNGEFGVVCKPNTV 61
+A ++F +L +V TYNT++ G CR G +L L+ M + N N V
Sbjct: 308 KAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-------VNIV 360
Query: 62 TYTTIIDGLCKEGFVDKAKELFLKMKDENINPNVVTYNSLIHGFCYANDWNEAKCLFIEM 121
+Y +I GL + G +D+A ++ M + + TY IHG C N+A + E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 122 MDQGVQPNVVSFNVIMNELCKNGKMDEASRLLELMIQIGVRPNAFVYNTLMDGFCLTGRV 181
G +V ++ I++ LCK +++EAS L++ M + GV N+ V N L+ G R+
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 182 NRAEELFVSMESMGCKHNVFSYSILINGYCKNKEIEGALSLYSEMLSKGIKPDVVIYNTL 241
A M GC+ V SY+ILI G CK + A + EML G KPD+ Y+ L
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 242 FIGLFEIHQVERAFKLFDEMQRHGVAADTWAYRTFIDGLCKNGYIVEAVELFRTLRILKY 301
GL +++ A +L+ + + G+ D + I GLC G + +A+ + +
Sbjct: 541 LCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNC 600
Query: 302 ELDIRAYNCLIDGLCKSGRLKIAWELFRSLPRGVLIADVVTYNIMIHALCADGKMDKARD 361
++ YN L++G K G A ++ + + L D+++YN ++ LC + A +
Sbjct: 601 TANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAME 660
Query: 362 LFLD 365
F D
Sbjct: 661 FFDD 664
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,358,932
Number of Sequences: 539616
Number of extensions: 5476175
Number of successful extensions: 29020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 16554
Number of HSP's gapped (non-prelim): 3469
length of query: 369
length of database: 191,569,459
effective HSP length: 119
effective length of query: 250
effective length of database: 127,355,155
effective search space: 31838788750
effective search space used: 31838788750
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)