BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 036462
(390 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GMF8|RHDF1_DANRE Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1
Length = 857
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 105/208 (50%), Gaps = 20/208 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH G+ H L ++ + I LE+ G++RI +Y+LSG G+L SA+F+
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 713
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FG+L + EL +W I A A L+ ++ A G+LP +DNFA
Sbjct: 714 PYRAEVGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 773
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GF+SGF L F L FG + Y+ +I +++ G
Sbjct: 774 HISGFISGFFLSFAFLPYISFGRLDM------------------YRKRCQIIIFLVVFLG 815
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVP 376
GL++L + C WC L+C+P
Sbjct: 816 LFAGLVVLFYVHPIK--CEWCELLTCIP 841
>sp|Q6PIX5|RHDF1_MOUSE Inactive rhomboid protein 1 OS=Mus musculus GN=Rhbdf1 PE=1 SV=2
Length = 856
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FG+L + ELF +W I A A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GF+SG L F L FG + +I +Q VF + L++
Sbjct: 773 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQIII---------FQVVFLGLLAGLVVLF 823
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQLYCQ 390
Y + C WC +L+C+P C+ +L Q
Sbjct: 824 YFYPV-----------RCEWCEFLTCIPFTDKFCEKYELDAQ 854
>sp|Q96CC6|RHDF1_HUMAN Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2
Length = 855
Score = 114 bits (285), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FG+L + ELF +W I A A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GF+SG L F L FG + +I +Q VF + L++
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII---------FQVVFLGLLAGLVVLF 822
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQLYCQ 390
Y + C WC +L+C+P C+ +L Q
Sbjct: 823 YVYPV-----------RCEWCEFLTCIPFTDKFCEKYELDAQ 853
>sp|Q499S9|RHDF1_RAT Inactive rhomboid protein 1 OS=Rattus norvegicus GN=Rhbdf1 PE=2
SV=1
Length = 856
Score = 114 bits (284), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FG+L + ELF +W I A A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GF+SG L F L FG + +I +Q VF + L++
Sbjct: 773 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQIII---------FQAVFLGLLAGLVVLF 823
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQLYCQ 390
Y + C WC +L+C+P C+ +L Q
Sbjct: 824 YFYPV-----------RCEWCEFLTCIPFTDKFCEKYELDAQ 854
>sp|B0VX73|RHDF1_CALJA Inactive rhomboid protein 1 OS=Callithrix jacchus GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 113 bits (283), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FG+L + ELF +W I A A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GF+SG L F L FG + ++ +Q VF + L++
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV---------FQVVFLGLLAGLVVLF 822
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQLYCQ 390
Y + C WC +L+C+P C+ +L Q
Sbjct: 823 YVYPV-----------RCEWCEFLTCIPFTDKFCEKYELDAQ 853
>sp|A9L8T6|RHDF1_PAPAN Inactive rhomboid protein 1 OS=Papio anubis GN=RHBDF1 PE=3 SV=1
Length = 855
Score = 113 bits (282), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FG+L + ELF +W I A A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GF+SG L F L FG + +I +Q VF + L++
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII---------FQVVFLGLLAGLVVLF 822
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQLYCQ 390
Y + C WC +L+C+P C+ +L Q
Sbjct: 823 YFYPV-----------RCEWCEFLTCIPFTDKFCEKYELDAQ 853
>sp|A7YWH9|RHDF1_BOVIN Inactive rhomboid protein 1 OS=Bos taurus GN=RHBDF1 PE=2 SV=1
Length = 856
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH GV H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+
Sbjct: 653 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FG+L + ELF +W I A A L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GF+SG L F L FG + ++ +Q VF + L++
Sbjct: 773 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV---------FQLVFLGLLAGLVVLF 823
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQLYCQ 390
Y + C WC +L+C+P C+ +L Q
Sbjct: 824 YFYPV-----------RCEWCEFLTCIPFTDKFCEKYELDAQ 854
>sp|B1MT31|RHDF1_CALMO Inactive rhomboid protein 1 OS=Callicebus moloch GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 112 bits (281), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH G+ H L ++ + + LE+ G+ RI +Y+LSG G+L SA+F+
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FG+L + ELF +W I A A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GF+SG L F L FG + ++ +Q VF + L++
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV---------FQVVFLGLLAGLVVLF 822
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQLYCQ 390
Y + C WC +L+C+P C+ +L Q
Sbjct: 823 YFYPV-----------RCEWCEFLTCIPFTDKFCEKYELDAQ 853
>sp|Q00M95|RHDF2_CANFA Inactive rhomboid protein 2 OS=Canis familiaris GN=RHBDF2 PE=2 SV=1
Length = 827
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 113/236 (47%), Gaps = 21/236 (8%)
Query: 153 LDKM-GALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGF 211
LDK+ G L Q +RL ++LH GV H L +++ + I LE+ G+ RI
Sbjct: 607 LDKVCGLLPFLNPEVPDQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAI 666
Query: 212 LYVLSGFGGSLTSALFIQEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVI 271
+++LSG G+L SA+F+ VG +G+ FGLL + ELF +W + A L L I
Sbjct: 667 IFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAI 726
Query: 272 ISINLAVGILPKVDNFAHIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHK 331
+ G+LP +DN AHI GFLSG LL F L FG S K
Sbjct: 727 VLFLFICGLLPWIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDK---------------- 769
Query: 332 PYQYVFWVISLILLIAGYTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQL 387
Y+ ++ +L+ AG L++ L +N W YL+C P C+ +L
Sbjct: 770 -YRKRALILVSLLVFAGLFASLVIWLYVYPIN--WPWIEYLTCFPFTSRFCEKYEL 822
>sp|A0JPA1|RHDF2_XENTR Inactive rhomboid protein 2 OS=Xenopus tropicalis GN=rhbdf2 PE=2
SV=1
Length = 826
Score = 106 bits (265), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/208 (34%), Positives = 107/208 (51%), Gaps = 20/208 (9%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q +RL ++LH GV H +++ + + LE+ G++RI +Y+LSG G+L SALF+
Sbjct: 623 QFYRLWLSLFLHAGVIHCCVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNLASALFL 682
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFA 288
VG +G+ FGLL + ELF +W I A A L L+ I+ G+LP +DN A
Sbjct: 683 PYRAEVGPAGSQFGLLACLFVELFQSWQILAKPWKAFLKLLGIVLFLFLFGLLPWIDNIA 742
Query: 289 HIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVISLILLIAG 348
HI GFLSG LL F L FG + K + +ISL++ + G
Sbjct: 743 HIFGFLSGLLLSFSFLPYITFG-----------------TADKFRKRAMIIISLLVFV-G 784
Query: 349 YTVGLILLLRGGNLNNHCSWCRYLSCVP 376
L++ L +N +W YL+C+P
Sbjct: 785 LFASLVIWLYVYPIN--WAWIEYLTCLP 810
>sp|Q6PJF5|RHDF2_HUMAN Inactive rhomboid protein 2 OS=Homo sapiens GN=RHBDF2 PE=1 SV=2
Length = 856
Score = 105 bits (263), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 112/236 (47%), Gaps = 21/236 (8%)
Query: 153 LDKM-GALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGF 211
LDK+ G L Q +RL ++LH GV H L +++ + I LE+ G+ RI
Sbjct: 636 LDKVCGLLPFLNPEVPDQFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAI 695
Query: 212 LYVLSGFGGSLTSALFIQEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVI 271
+++LSG G+L SA+F+ VG +G+ FGLL + ELF +W + A L L I
Sbjct: 696 IFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAI 755
Query: 272 ISINLAVGILPKVDNFAHIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHK 331
+ G+LP +DN AHI GFLSG LL F L FG S K
Sbjct: 756 VLFLFICGLLPWIDNIAHIFGFLSGLLLAFAFLPYITFG-TSDK---------------- 798
Query: 332 PYQYVFWVISLILLIAGYTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQL 387
Y+ ++ +L AG L+L L +N W +L+C P C+ +L
Sbjct: 799 -YRKRALILVSLLAFAGLFAALVLWLYIYPIN--WPWIEHLTCFPFTSRFCEKYEL 851
>sp|Q80WQ6|RHDF2_MOUSE Inactive rhomboid protein 2 OS=Mus musculus GN=Rhbdf2 PE=1 SV=1
Length = 827
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 112/236 (47%), Gaps = 21/236 (8%)
Query: 153 LDKM-GALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGF 211
LDK+ G L Q +R+ ++LH G+ H L +++ + I LE+ G+ RI
Sbjct: 607 LDKVCGLLPFLNPEVPDQFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISI 666
Query: 212 LYVLSGFGGSLTSALFIQEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVI 271
+++LSG G+L SA+F+ VG +G+ FGLL + ELF +W + A L I
Sbjct: 667 IFILSGITGNLASAIFLPYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAI 726
Query: 272 ISINLAVGILPKVDNFAHIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHK 331
+ G+LP +DN AHI GFLSG LL F L FG S K
Sbjct: 727 VLFLFICGLLPWIDNIAHIFGFLSGMLLAFAFLPYITFG-TSDK---------------- 769
Query: 332 PYQYVFWVISLILLIAGYTVGLILLLRGGNLNNHCSWCRYLSCVPTPWWNCKAQQL 387
Y+ ++ +L+ AG L+L L +N W YL+C P C+ +L
Sbjct: 770 -YRKRALILVSLLVFAGLFASLVLWLYIYPIN--WPWIEYLTCFPFTSRFCEKYEL 822
>sp|C8VCL5|Y0929_EMENI Uncharacterized rhomboid protein AN10929 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN10929 PE=3 SV=1
Length = 503
Score = 102 bits (255), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 119/257 (46%), Gaps = 36/257 (14%)
Query: 168 HQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALF 227
Q +R + ++LH G H+ N+L + +G +E+ G+ R G +Y+ SG G + +
Sbjct: 249 DQWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGFVLGGNY 308
Query: 228 IQEG-ISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDN 286
+G S G SGALFG+L + +L W N L+ +++ I+++ +G+LP +DN
Sbjct: 309 AGQGEASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVSFVLGLLPGLDN 368
Query: 287 FAHIGGFLSGFLLGFVLLIRPQF----------------GWISQKKAPPGYMINCVKSK- 329
F+H+GGF G LG ++ P G ++ + A P S
Sbjct: 369 FSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVAMSGGVAAENADPDQNKTSTGSNI 428
Query: 330 --------------HKPYQYVFWVISLILLIAGYTVGLILLLRG--GNLNNHCSWCRYLS 373
KP + +W++ L L+A +G ILL+ +++CSWC S
Sbjct: 429 GGLGKFNPKGFFAGRKPLWWAWWLVRLGALVA-VLIGFILLIVNFYKYPSSNCSWCYRFS 487
Query: 374 CVPTPWWNCKAQQLYCQ 390
C+P W C L+ +
Sbjct: 488 CLPVNGW-CDQGNLFSR 503
>sp|Q695T8|RHBL4_TOXGO Rhomboid-like protease 4 OS=Toxoplasma gondii GN=ROM4 PE=2 SV=1
Length = 641
Score = 92.8 bits (229), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 1/155 (0%)
Query: 148 PSSPALDKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFV 207
P++ L +G L + + +RL T +++HGG H+L N+ + I +E ++GF+
Sbjct: 320 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 379
Query: 208 RIGFLYVLSGFGGSLTSALFIQEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLT 267
R L+ L G G+L SA+ I+VG+SG+++ LLGA++ W L+
Sbjct: 380 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 439
Query: 268 LIVIISINLAVGILPKVDNFAHIGGFLSGFLLGFV 302
+IV+I I + G+ DN+AH+GG L G L GF
Sbjct: 440 MIVVI-IGILTGMAGFTDNYAHMGGALGGILWGFA 473
>sp|Q6IUY1|RHBL3_TOXGO Rhomboid-like protease 3 OS=Toxoplasma gondii GN=ROM3 PE=2 SV=1
Length = 263
Score = 81.6 bits (200), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 148 PSSPALDKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFV 207
P+ L +GA A + Q+WR++T ++LH + H++ N++ +L I +RLE+ +G
Sbjct: 62 PNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTK 120
Query: 208 RIGFLYVLSGFGGSLTSALFIQEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLT 267
+ Y LS G+L S L +SVGAS A FG++G M +E+ W + +L + +
Sbjct: 121 KFLVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSEELKRIYS 180
Query: 268 LIVIISINLAVGIL-----PKVDNFAHIGGFLSGFLL 299
+ + I LAV I VD F H+GGFL+G L
Sbjct: 181 MDICI---LAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>sp|P20350|RHOM_DROME Protein rhomboid OS=Drosophila melanogaster GN=rho PE=1 SV=2
Length = 355
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 144/362 (39%), Gaps = 74/362 (20%)
Query: 5 NNKTPNDFEITVMSSPRPRPPPPLEAASSPAETESTSSTTTATATRRTSVSSQGGASSSS 64
N T N E V E + A E+ A ++ S S S++S
Sbjct: 2 ENLTQNVNETKVDLGQEKEKEASQEEEHATAAKETIIDIPAACSSSSNSSSYDTDCSTAS 61
Query: 65 S------------PRPASTAPPRGIPETAMYSDFLSPFKRHFPWMVPGFVVANIVLFVIT 112
S R A A P +PE+ ++H+PW + + I +F
Sbjct: 62 STCCTRQGEHIYMQREAIPATP--LPESEDIGLLKYVHRQHWPWFILVISIIEIAIFAYD 119
Query: 113 MYENNCPQTSATGCLGAKFLGRFSFLPLKDNPLLGPSSPALDKMGALTVAKVVTQHQVWR 172
Y + A+ G LP+ P+ PS L V + + QVWR
Sbjct: 120 RY-----------TMPAQNFG----LPV---PI--PSDSVL-------VYRPDRRLQVWR 152
Query: 173 LLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGI 232
+ ++LH FH+ N++ LF GI LE G RIG +Y+ F GSL +++ E
Sbjct: 153 FFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVDSEVF 212
Query: 233 SVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGIL----------- 281
VGASG ++ LL A L+ + N+ + L ++++ +S +L +
Sbjct: 213 LVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQYFDGSAFAK 272
Query: 282 -PKVDNFAHIGGFLSGFLLGFVLLIRPQFGWISQKKAPPGYMINCVKSKHKPYQYVFWVI 340
P+V AH+ G L+G +GF++L FG H+ Y+ + W +
Sbjct: 273 GPQVSYIAHLTGALAGLTIGFLVL--KNFG-------------------HREYEQLIWWL 311
Query: 341 SL 342
+L
Sbjct: 312 AL 313
>sp|Q76NQ1|RHDF1_DROME Inactive rhomboid protein 1 OS=Drosophila melanogaster GN=rho-5 PE=2
SV=1
Length = 1429
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 79/143 (55%), Gaps = 4/143 (2%)
Query: 164 VVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLT 223
V T Q++RLLT + +H G+ H+ ++ LE+ G VR +Y++SGF G+LT
Sbjct: 1087 VETPDQLYRLLTSLCMHAGILHLAITLIFQHLFLADLERLIGTVRTAIVYIMSGFAGNLT 1146
Query: 224 SALFIQEGISVGASGALFGLLGAMLSEL-FTNWTIYANKLAALLTLIVIISINLAVGILP 282
SA+ + VG S +L G++ ++++ L + +W AL L+++ S+ + +G LP
Sbjct: 1147 SAILVPHRPEVGPSASLSGVVASLIALLVWMHWKYLHKPHIALFKLLLLCSVLVGIGTLP 1206
Query: 283 KVDNFAHIGGFLSGFLLGFVLLI 305
NF G L+G + G +L +
Sbjct: 1207 YQLNFL---GLLAGVICGCLLTM 1226
>sp|Q695T9|RHBL2_TOXGO Rhomboid-like protease 2 OS=Toxoplasma gondii GN=ROM2 PE=2 SV=1
Length = 283
Score = 72.8 bits (177), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 2/165 (1%)
Query: 140 LKDNPLLGPSSPALDKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIR 199
L N +L P+ L GA + +++ ++WRL+ ++LH +FH+L N+ + IG+
Sbjct: 81 LAPNEILAPTPQTLVMFGA-NIPELIRVGEIWRLICPLFLHLNLFHILMNLWVQIRIGLT 139
Query: 200 LEQEFGFVRIGFLYVLSGFGGSLTSALFIQEG-ISVGASGALFGLLGAMLSELFTNWTIY 258
+E+++G+ + +Y G ++ SA + G + GAS A+F L+G L+EL W
Sbjct: 140 MEEKYGWKMLLAVYFGVGVLANMISAAVLFCGQMKAGASTAVFALIGVQLAELALIWHAI 199
Query: 259 ANKLAALLTLIVIISINLAVGILPKVDNFAHIGGFLSGFLLGFVL 303
++ +A++++ + + +D+ HIGG + GF G L
Sbjct: 200 QDRNSAIISVCICLFFVFVSSFGSHMDSVGHIGGLVMGFAAGIWL 244
>sp|P58872|RHBL3_HUMAN Rhomboid-related protein 3 OS=Homo sapiens GN=RHBDL3 PE=2 SV=1
Length = 404
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
QVWR LT I++H G+ H+ N++ L +G+ LE G RIG +YV GSL ++
Sbjct: 210 QVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSVAD 269
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGI-------- 280
VG+SG ++ L+ A L+ + NW+ + L + +I +++ G
Sbjct: 270 MTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRFHP 329
Query: 281 -----LPKVDNFAHIGGFLSGFLLGFVLL 304
P AH+GG G LG V+L
Sbjct: 330 SAYPPCPHPSFVAHLGGVAVGITLGVVVL 358
>sp|P54493|GLUP_BACSU Rhomboid protease GluP OS=Bacillus subtilis (strain 168) GN=gluP
PE=1 SV=2
Length = 507
Score = 69.3 bits (168), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 77/135 (57%), Gaps = 2/135 (1%)
Query: 164 VVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLT 223
++ Q + WRLLT I LH G+ H+ N L+L +G +E+ +G R +Y+ +G GS+
Sbjct: 216 LIAQGEWWRLLTPIVLHIGIAHLAFNTLALWSVGTAVERMYGSGRFLLIYLAAGITGSIA 275
Query: 224 SALFIQEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPK 283
S +F S GASGA+FG LGA+L +N ++ + + +I+II++ +
Sbjct: 276 SFVF-SPYPSAGASGAIFGCLGALLYVALSNRKMFLRTIGTNIIVIIIINLGFGFAV-SN 333
Query: 284 VDNFAHIGGFLSGFL 298
+DN HIGG + GF
Sbjct: 334 IDNSGHIGGLIGGFF 348
>sp|Q19821|ROM1_CAEEL Rhomboid-related protein 1 OS=Caenorhabditis elegans GN=rom-1 PE=3
SV=2
Length = 356
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
+ WR + ++LH G+ H+L N++ L +GI LE RIG +Y+L+ GSL
Sbjct: 165 EAWRFTSYMFLHAGLNHLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTSGSLLQYAID 224
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGILPK----- 283
+ VGAS ++ L+ A ++ + NW + +L L V I ++ I +
Sbjct: 225 PNSLLVGASAGVYALIFAHVANVILNWHEMPLRWIRVLVLFVFIFLDFGGAIHRRFYTND 284
Query: 284 ---VDNFAHIGGFLSGFLLGFVLL 304
V + AHI G ++G G+V+L
Sbjct: 285 CDSVSHLAHIAGAVTGLFFGYVVL 308
>sp|P58873|RHBL3_MOUSE Rhomboid-related protein 3 OS=Mus musculus GN=Rhbdl3 PE=2 SV=1
Length = 404
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q WR +T I++H GV + N+ L +G+ LE G RIG +YV GSL ++
Sbjct: 210 QAWRYVTYIFMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYVAGVVAGSLAVSVAD 269
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGI-------- 280
VG+SG ++ L+ A L+ + NW+ + L + +I +++ G
Sbjct: 270 MTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMSMEFGRAVWLRFHP 329
Query: 281 -----LPKVDNFAHIGGFLSGFLLGFVLL 304
P AH+GG G LG V+L
Sbjct: 330 SAYPPCPHPSFVAHLGGVAVGITLGVVVL 358
>sp|Q695U0|RHBL1_TOXGO Rhomboid-like protease 1 OS=Toxoplasma gondii GN=ROM1 PE=2 SV=1
Length = 293
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 120/283 (42%), Gaps = 55/283 (19%)
Query: 29 EAASSPAETESTSSTTTATATRRTSVSSQGGASSSSSPRPASTAPPRGIPETAMYSDFLS 88
+ + E T T +R + +S GGA+ PR +P FL
Sbjct: 9 DLRTEDEADEHTPLYNAETGSRDSDSTSSGGAA------------PRSMP-----IRFLE 51
Query: 89 PFKRHFPW--MVPGFVVANIVLFVITMYENNCPQTSATGCLGAKFLGRFSFLPLKDNPLL 146
HF +V + + + +++T+ CL + PL+
Sbjct: 52 LLFPHFSLKSVVLAISIVDWIFYIVTV------------CLDTEL------------PLI 87
Query: 147 GPSSPALDKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGF 206
P++ L GA ++ Q QVWRLL ++LH FHV N+ L +G +E+ +G
Sbjct: 88 -PAANILVHFGA-NYPPLIKQGQVWRLLLPVFLHANFFHVFFNVFFQLRMGFTIERRYGL 145
Query: 207 VRIGFLYVLSGFGGSLTSAL-FIQEGISVGASGALFGLLGAMLSELFTNWTIYANK---- 261
++ LY S G+L SA F + VGAS A FGL+G + E+ W ++
Sbjct: 146 LKFTGLYFASAIYGNLLSATAFFCNSLKVGASTAGFGLIGIQICEMALTWHRMRHRDRML 205
Query: 262 --LAALLTLIVIISINLAVGILPKVDNFAHIGGFLSGFLLGFV 302
+ + + L+V++ L G +D H+GG L GF +G +
Sbjct: 206 TNMVSFVLLMVLLMFTLNGG---SIDQMGHLGGLLCGFSIGML 245
>sp|A2AGA4|RHBL2_MOUSE Rhomboid-related protein 2 OS=Mus musculus GN=Rhbdl2 PE=1 SV=1
Length = 302
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 20/166 (12%)
Query: 167 QHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSAL 226
+ + WR ++ + +H GV H++ N+L + +GI LE +R+G +Y+ GSL S++
Sbjct: 116 REEAWRFISYMLVHAGVQHIVGNLLMQIVLGIPLEMVHKGLRVGLVYLAGVLAGSLASSI 175
Query: 227 FIQEGISVGASGALFGLLGAMLSELFTNW--TIYANKLAALLTLIVIISINLAVGILPK- 283
F VGASG ++ L+G + N+ I A + LL +I+I++ ++ + +
Sbjct: 176 FDPLKSLVGASGGVYALMGGYFMNVIVNFREMIPAFGIVRLLVIILIVASDMGFALYRRF 235
Query: 284 --------VDNFAHIGGFLSGFLLGF--------VLLIRPQFGWIS 313
V AHI G +G +G+ LL P+F WI+
Sbjct: 236 FVPANGSPVSFAAHIAGGFAGMSIGYTVFSCFDKTLLKDPRF-WIA 280
>sp|Q6GV23|RHBL5_TOXGO Rhomboid-like protease 5 OS=Toxoplasma gondii GN=ROM5 PE=1 SV=1
Length = 841
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 148 PSSPALDKMGALTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFV 207
P+ +GAL KV +++R++ ++LHGG H+L N+ LE +GF+
Sbjct: 442 PNPRVFSSLGALDTNKVRNYGEMFRVVWGMFLHGGWMHLLLNVSCQAQTLWILEPAWGFL 501
Query: 208 RIGFLYVLSGFGGSLTSALFIQEGISVGASGALFGLLGAMLSELFTNWTIYANK---LAA 264
R L+++ G GSL SA+ ++VG+SGA +GLLGA++ W A+ L
Sbjct: 502 RTLSLWIVGGVSGSLLSAVANPCTVTVGSSGAFYGLLGALVPFSIEYWDHIASPAWFLFC 561
Query: 265 LLTLIVIISINLAVGILPKVDNFAH 289
+ L+++ VG+ VDN AH
Sbjct: 562 VSVLVMVAQFGNMVGVQ-GVDNNAH 585
>sp|O75783|RHBL1_HUMAN Rhomboid-related protein 1 OS=Homo sapiens GN=RHBDL1 PE=2 SV=1
Length = 438
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
+ WR LT +++H G+ + N L L IG+ LE G +RI LY+ GSLT ++
Sbjct: 244 RAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLYLAGVLAGSLTVSITD 303
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGIL------- 281
VG SG ++ L A L+ + NW L ++ ++ ++ VG
Sbjct: 304 MRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSP 363
Query: 282 ------PKVDNFAHIGGFLSGFLLGFVLL------IRPQFGW 311
P+ AH+ G + G +G +L +R Q GW
Sbjct: 364 PLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 405
>sp|Q8VC82|RHBL1_MOUSE Rhomboid-related protein 1 OS=Mus musculus GN=Rhbdl1 PE=2 SV=1
Length = 373
Score = 62.0 bits (149), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
+ WR LT +++H G+ + N L L IG+ LE G +RI LY+ GSLT ++
Sbjct: 179 RAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITD 238
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGIL------- 281
VG SG ++ L A L+ + NW L ++ ++ ++ VG
Sbjct: 239 MRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSP 298
Query: 282 ------PKVDNFAHIGGFLSGFLLGFVLL------IRPQFGW 311
P+ AH+ G + G +G +L +R Q GW
Sbjct: 299 PLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 340
>sp|P34356|ROM2_CAEEL Rhomboid-related protein 2 OS=Caenorhabditis elegans GN=rom-2 PE=3
SV=2
Length = 435
Score = 59.7 bits (143), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 164 VVTQH---QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGG 220
+V+Q+ ++WRL T ++ G+FH++ N+L L IG+ LE + RI LY + G
Sbjct: 160 IVSQYHLPELWRLFTYCLINVGIFHIIFNILIQLAIGVPLELVHRW-RIYILYFMGVLFG 218
Query: 221 SLTSALFIQEGISVGASGALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGI 280
S+ S G + F L+ + ++ + TN+ N L LIV +++ + +
Sbjct: 219 SILSLALDPTVFLCGGAAGSFSLIASHITTIATNFKEMENATCRLPILIVFAALDYVLAV 278
Query: 281 L-----PKVDN---FAHIGGFLSGFLLGFVLL 304
P++D + H+GG ++G L F+L
Sbjct: 279 YQRFFAPRIDKVSMYGHLGGLVAGILFTFILF 310
>sp|P46116|AARA_PROST Rhomboid protease AarA OS=Providencia stuartii GN=aarA PE=1 SV=1
Length = 281
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 23/161 (14%)
Query: 171 WRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQE 230
WR + LH H+ N L+L IGI E+ +G ++ +Y++SG G +L SA +
Sbjct: 69 WRYPISMMLHSNGTHLAFNCLALFVIGIGCERAYGKFKLLAIYIISGIGAALFSAYWQYY 128
Query: 231 GIS---------------VGASGALFGLLGA---MLSELFTNW-----TIYANKLAALLT 267
IS VGASGA+ G+ A L ++ N I + L
Sbjct: 129 EISNSDLWTDSTVYITIGVGASGAIMGIAAASVIYLIKVVINKPNPHPVIQRRQKYQLYN 188
Query: 268 LIVIISINLAVGILPKVDNFAHIGGFLSGFLLGFVLLIRPQ 308
LI +I++ L G+ VDN AHIGG + G L+ ++ P
Sbjct: 189 LIAMIALTLINGLQSGVDNAAHIGGAIIGALISIAYILVPH 229
>sp|Q9NX52|RHBL2_HUMAN Rhomboid-related protein 2 OS=Homo sapiens GN=RHBDL2 PE=1 SV=2
Length = 303
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 166 TQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSA 225
+ + WR ++ + +H GV H+L N+ L +GI LE +R+G +Y+ GSL S+
Sbjct: 116 KREEAWRFISYMLVHAGVQHILGNLCMQLVLGIPLEMVHKGLRVGLVYLAGVIAGSLASS 175
Query: 226 LFIQEGISVGASGALFGLLGAMLSELFTNW 255
+F VGASG ++ L+G + N+
Sbjct: 176 IFDPLRYLVGASGGVYALMGGYFMNVLVNF 205
>sp|P96617|YDCA_BACSU Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168)
GN=ydcA PE=3 SV=1
Length = 199
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 14/151 (9%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + WRL+T I LH G H+L N +S+ LE+ G R +Y SG G++ +
Sbjct: 53 VANGEWWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYAGSGIIGNIGT 112
Query: 225 ALFIQE---GISVGASGALFGLLGAML-SELFTNWTI---YANKLAALLTLIVIISINLA 277
++ E + VGASGA+FGL G L LF N I ++ + LL V++S
Sbjct: 113 --YVTEPLDYVHVGASGAIFGLFGVYLFMVLFRNELIGQEHSKMIITLLAFAVLMSF--- 167
Query: 278 VGILPKVDNFAHIGGFLSGFLLGFVLLIRPQ 308
I ++ AH+ G GFLL F+ + + +
Sbjct: 168 --INSNINMMAHLFGLCGGFLLSFLCVQKKE 196
>sp|Q8LB17|Y3846_ARATH Uncharacterized protein At3g58460 OS=Arabidopsis thaliana
GN=At3g58460 PE=1 SV=2
Length = 403
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 50/168 (29%)
Query: 162 AKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVL------ 215
+ ++++ QV+R T I HG + HVL NM++L+ +G LE+ G VR+ +L VL
Sbjct: 56 SAIISRFQVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVLLATTNA 115
Query: 216 --------------------------SGFGGSLTSALFIQEGISVGASGALFGLLGAMLS 249
GF G L S + I+ +S S ++FGL
Sbjct: 116 VLHLLIASLAGYNPFYQYDHLMNECAIGFSGILFSMIVIETSLSGVTSRSVFGLF----- 170
Query: 250 ELFTNWTIYANKLAALLTLIVIISINLAVGILPKVDNFAHIGGFLSGF 297
N A L I++I L ++ V H+ G LSGF
Sbjct: 171 ----------NVPAKLYPWILLIVFQL---LMTNVSLLGHLCGILSGF 205
>sp|O88779|RHBL1_RAT Rhomboid-related protein 1 (Fragment) OS=Rattus norvegicus
GN=Rhbdl1 PE=2 SV=1
Length = 164
Score = 48.5 bits (114), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 19/153 (12%)
Query: 178 WLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFIQEGISVGAS 237
++H G+ + N L L IG+ LE G +RI LY+ GSLT ++ VG S
Sbjct: 1 FMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGS 60
Query: 238 GALFGLLGAMLSELFTNWTIYANKLAALLTLIVIISINLAVGIL-------------PKV 284
G ++ L A L+ + NW L ++ ++ ++ VG P+
Sbjct: 61 GGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQP 120
Query: 285 DNFAHIGGFLSGFLLGFVLL------IRPQFGW 311
AH+ G + G +G +L +R Q GW
Sbjct: 121 SFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 153
>sp|Q4V8F3|RHBL4_RAT Rhomboid-related protein 4 OS=Rattus norvegicus GN=Rhbdd1 PE=2 SV=1
Length = 316
Score = 40.0 bits (92), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 159 LTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFG---FVRI------ 209
++V K Q+ RLL HG +H+ NM+S+L+ G++LE+ G F I
Sbjct: 54 ISVEKCYQQNDWQRLLLSPVHHGDDWHLYFNMVSMLWKGVKLEKRLGSRWFAYIIATFSL 113
Query: 210 --GFLYVLSGFG-GSLTSALFIQEGISVGASGALFGL 243
G +Y+L F L + + +VG SG LF L
Sbjct: 114 LTGVVYLLLQFASAELMNQPDFKRNCAVGFSGVLFAL 150
>sp|P53259|PCP1_YEAST Rhomboid protein 1, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCP1 PE=1 SV=1
Length = 346
Score = 38.5 bits (88), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 61/136 (44%), Gaps = 13/136 (9%)
Query: 180 HGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS------ALFIQEGIS 233
H +H+ NML+L G L G LY+ S GSL S A G S
Sbjct: 193 HQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWYPKLARLAIVGPS 252
Query: 234 VGASGALFGLLGAMLSELFTNWTI----YANKLAALLTLIVIISINLAVGILP--KVDNF 287
+GASGALFG+LG S LF + I + A + + ++ N A L D
Sbjct: 253 LGASGALFGVLGC-FSYLFPHAKILLFVFPVPGGAWVAFLASVAWNAAGCALRWGSFDYA 311
Query: 288 AHIGGFLSGFLLGFVL 303
AH+GG + G L G+ +
Sbjct: 312 AHLGGSMMGVLYGWYI 327
>sp|Q8BHC7|RHBL4_MOUSE Rhomboid-related protein 4 OS=Mus musculus GN=Rhbdd1 PE=1 SV=1
Length = 315
Score = 38.1 bits (87), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 12/97 (12%)
Query: 159 LTVAKVVTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFG---FVRI------ 209
++V K Q RLL HG +H+ NM+S+L+ G++LE+ G F +
Sbjct: 54 ISVEKCYQQKDWQRLLLSPLHHGDDWHLYFNMVSMLWKGVKLERRLGSRWFAYVIATFSL 113
Query: 210 --GFLYVLSGFG-GSLTSALFIQEGISVGASGALFGL 243
G +Y+L F L + + +VG SG LF L
Sbjct: 114 LTGVVYLLLQFTVAELLNQPDFKRNCAVGFSGVLFAL 150
>sp|B5BHH5|GLPG_SALPK Rhomboid protease GlpG OS=Salmonella paratyphi A (strain AKU_12601)
GN=glpG PE=3 SV=1
Length = 276
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLA- 277
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVASWFDW 244
Query: 278 VGILPKVDNFAHIGGFLSGFLLGFV 302
G+ + N AHI G + G + FV
Sbjct: 245 FGM--SMANGAHIAGLIVGLAMAFV 267
>sp|Q5PLZ8|GLPG_SALPA Rhomboid protease GlpG OS=Salmonella paratyphi A (strain ATCC 9150
/ SARB42) GN=glpG PE=3 SV=1
Length = 276
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 14/145 (9%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLA- 277
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVASWFDW 244
Query: 278 VGILPKVDNFAHIGGFLSGFLLGFV 302
G+ + N AHI G + G + FV
Sbjct: 245 FGM--SMANGAHIAGLIVGLAMAFV 267
>sp|Q8ZLH5|GLPG_SALTY Rhomboid protease GlpG OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=glpG PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|B4TY77|GLPG_SALSV Rhomboid protease GlpG OS=Salmonella schwarzengrund (strain
CVM19633) GN=glpG PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|B4SVM1|GLPG_SALNS Rhomboid protease GlpG OS=Salmonella newport (strain SL254) GN=glpG
PE=3 SV=2
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|B4TKV0|GLPG_SALHS Rhomboid protease GlpG OS=Salmonella heidelberg (strain SL476)
GN=glpG PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|B5R7J1|GLPG_SALG2 Rhomboid protease GlpG OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=glpG PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|B5R383|GLPG_SALEP Rhomboid protease GlpG OS=Salmonella enteritidis PT4 (strain
P125109) GN=glpG PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|B5FKE3|GLPG_SALDC Rhomboid protease GlpG OS=Salmonella dublin (strain CT_02021853)
GN=glpG PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|B5F8P0|GLPG_SALA4 Rhomboid protease GlpG OS=Salmonella agona (strain SL483) GN=glpG
PE=3 SV=2
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|Q8Z229|GLPG_SALTI Rhomboid protease GlpG OS=Salmonella typhi GN=glpG PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVIS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|Q57IV1|GLPG_SALCH Rhomboid protease GlpG OS=Salmonella choleraesuis (strain SC-B67)
GN=glpG PE=3 SV=1
Length = 276
Score = 37.4 bits (85), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 165 VTQHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTS 224
V + +VWR T I++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 130 VLKFEVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVVS----ALLS 185
Query: 225 ALFIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAV 278
++Q+ S G SG ++ L+G + E IY + + L+ I++
Sbjct: 186 G-YVQQKFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-GWFD 243
Query: 279 GILPKVDNFAHIGGFLSGFLLGFV 302
+ N AHI G + G + FV
Sbjct: 244 WFGMSMANGAHIAGLIVGLAMAFV 267
>sp|A8GKU2|GLPG_SERP5 Rhomboid protease GlpG OS=Serratia proteamaculans (strain 568)
GN=glpG PE=3 SV=1
Length = 278
Score = 37.0 bits (84), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 18/142 (12%)
Query: 169 QVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSALFI 228
Q+WR ++ +LH + H+ N+L ++G LE+ G ++ L V+S F +LF
Sbjct: 135 QLWRWVSHAFLHFSLLHITFNLLWWWYLGGPLEKRLGSGKLFVLAVVSAFFSGWAQSLF- 193
Query: 229 QEGISVGASGALFGLLGAMLSELFTNWTIYANK-----LAALLTLIVIISINLAVGILP- 282
SGALFG L ++ L + + L L+V + L G
Sbjct: 194 --------SGALFGGLSGVVYALMGYCWLSGERAPERGLMLPRGLMVFSVLWLVAGYFDI 245
Query: 283 ---KVDNFAHIGGFLSGFLLGF 301
+ N AH+ G + G L+ F
Sbjct: 246 LGMSIANAAHVAGLVLGLLMAF 267
>sp|A6TF43|GLPG_KLEP7 Rhomboid protease GlpG OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=glpG PE=3 SV=1
Length = 276
Score = 36.6 bits (83), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 68/142 (47%), Gaps = 12/142 (8%)
Query: 167 QHQVWRLLTCIWLHGGVFHVLANMLSLLFIGIRLEQEFGFVRIGFLYVLSGFGGSLTSAL 226
Q + WR + ++H + H+L N+L ++G +E+ G ++ + V+S +L S
Sbjct: 132 QFEAWRYFSHAFMHFSLMHILFNLLWWWYLGGAVEKRIGSGKLVVITVIS----ALLSG- 186
Query: 227 FIQEGIS----VGASGALFGLLGA--MLSELFTNWTIYANKLAALLTLIVIISINLAVGI 280
F+Q S G SG ++ L+G + E IY + L +L+ +I+ V
Sbjct: 187 FVQHQFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLILFSLVWLIAGWFDVFG 246
Query: 281 LPKVDNFAHIGGFLSGFLLGFV 302
+ + N AH+ G +G + FV
Sbjct: 247 MA-IANGAHVAGLATGLAMAFV 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,221,214
Number of Sequences: 539616
Number of extensions: 6185157
Number of successful extensions: 45855
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 261
Number of HSP's successfully gapped in prelim test: 364
Number of HSP's that attempted gapping in prelim test: 40153
Number of HSP's gapped (non-prelim): 4814
length of query: 390
length of database: 191,569,459
effective HSP length: 119
effective length of query: 271
effective length of database: 127,355,155
effective search space: 34513247005
effective search space used: 34513247005
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)