Query 036463
Match_columns 119
No_of_seqs 112 out of 1025
Neff 7.9
Searched_HMMs 13730
Date Mon Mar 25 22:23:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/036463.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/036463hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1v9sa1 c.61.1.1 (A:1-208) Ura 18.7 14 0.001 24.0 0.4 7 109-115 202-208 (208)
2 d1o5oa_ c.61.1.1 (A:) Uracil P 18.4 14 0.001 24.0 0.4 8 108-115 203-210 (210)
3 d1i5ea_ c.61.1.1 (A:) Uracil P 18.1 15 0.0011 23.9 0.5 8 108-115 201-208 (208)
4 d1bd3a_ c.61.1.1 (A:) Uracil P 16.1 16 0.0012 24.0 0.3 6 109-114 218-223 (224)
5 d1ijva_ g.9.1.1 (A:) Beta-defe 12.8 16 0.0011 16.9 -0.4 19 96-116 10-28 (36)
6 d2crda_ g.3.7.2 (A:) Charybdot 8.9 53 0.0039 15.1 0.7 13 105-117 14-26 (37)
7 d1puza_ a.218.1.1 (A:) Hypothe 6.6 83 0.0061 16.8 1.0 12 106-117 56-67 (82)
8 d2ftxb1 d.300.1.2 (B:155-213) 5.7 71 0.0052 16.4 0.3 14 98-112 42-58 (59)
9 g1sse.1 g.78.1.1 (A:,B:) YAP1 4.6 92 0.0067 18.3 0.3 8 105-112 70-77 (121)
10 d1r11a3 d.75.1.1 (A:3-60) Dime 4.4 1.9E+02 0.014 13.9 1.5 13 21-33 25-37 (58)
No 1
>d1v9sa1 c.61.1.1 (A:1-208) Uracil PRTase, Upp {Thermus thermophilus [TaxId: 274]}
Probab=18.70 E-value=14 Score=23.99 Aligned_cols=7 Identities=57% Similarity=1.042 Sum_probs=5.5
Q ss_pred hhhcCcC
Q 036463 109 DRLLGTH 115 (119)
Q Consensus 109 D~lfGT~ 115 (119)
||+|||.
T Consensus 202 DR~fgT~ 208 (208)
T d1v9sa1 202 DRIYGTK 208 (208)
T ss_dssp HHHHTCC
T ss_pred HhccCCC
Confidence 8888884
No 2
>d1o5oa_ c.61.1.1 (A:) Uracil PRTase, Upp {Thermotoga maritima [TaxId: 2336]}
Probab=18.36 E-value=14 Score=23.96 Aligned_cols=8 Identities=50% Similarity=0.646 Sum_probs=5.9
Q ss_pred hhhhcCcC
Q 036463 108 CDRLLGTH 115 (119)
Q Consensus 108 wD~lfGT~ 115 (119)
=||+|||.
T Consensus 203 GDR~fgTk 210 (210)
T d1o5oa_ 203 GDRLFRTK 210 (210)
T ss_dssp HHHHHTCC
T ss_pred HHhhcCCC
Confidence 38888884
No 3
>d1i5ea_ c.61.1.1 (A:) Uracil PRTase, Upp {Bacillus caldolyticus [TaxId: 1394]}
Probab=18.12 E-value=15 Score=23.89 Aligned_cols=8 Identities=63% Similarity=0.962 Sum_probs=6.0
Q ss_pred hhhhcCcC
Q 036463 108 CDRLLGTH 115 (119)
Q Consensus 108 wD~lfGT~ 115 (119)
=||+|||.
T Consensus 201 GDR~fGT~ 208 (208)
T d1i5ea_ 201 GDRLFGTK 208 (208)
T ss_dssp HHHHHSCC
T ss_pred HHhccCCC
Confidence 38888884
No 4
>d1bd3a_ c.61.1.1 (A:) Uracil PRTase, Upp {Toxoplasma gondii [TaxId: 5811]}
Probab=16.13 E-value=16 Score=23.98 Aligned_cols=6 Identities=67% Similarity=1.138 Sum_probs=4.5
Q ss_pred hhhcCc
Q 036463 109 DRLLGT 114 (119)
Q Consensus 109 D~lfGT 114 (119)
||+|||
T Consensus 218 DR~fGT 223 (224)
T d1bd3a_ 218 DRYFGT 223 (224)
T ss_dssp HHHHTC
T ss_pred HhhcCC
Confidence 777777
No 5
>d1ijva_ g.9.1.1 (A:) Beta-defensin, BD {Human (Homo sapiens), HBD1 [TaxId: 9606]}
Probab=12.79 E-value=16 Score=16.86 Aligned_cols=19 Identities=26% Similarity=0.321 Sum_probs=15.3
Q ss_pred CCccCCCCCchhhhhhcCcCC
Q 036463 96 LKYNYSQPFFSICDRLLGTHM 116 (119)
Q Consensus 96 ~~~Nyg~~~~~~wD~lfGT~~ 116 (119)
+.+||+ + -++..|+=||..
T Consensus 10 g~c~~s-~-cpl~~ri~gtcy 28 (36)
T d1ijva_ 10 GQCLYS-A-CPIFTKIQGTCY 28 (36)
T ss_dssp CEEESS-C-CCTTCCEEEEET
T ss_pred ceeccc-c-CcceEeeeeeEe
Confidence 478998 4 899999988864
No 6
>d2crda_ g.3.7.2 (A:) Charybdotoxin {Scorpion (Leiurus quinquestriatus hebraeus) [TaxId: 6884]}
Probab=8.90 E-value=53 Score=15.13 Aligned_cols=13 Identities=38% Similarity=0.756 Sum_probs=10.2
Q ss_pred chhhhhhcCcCCC
Q 036463 105 FSICDRLLGTHMS 117 (119)
Q Consensus 105 ~~~wD~lfGT~~~ 117 (119)
+++.-++|||.+.
T Consensus 14 W~vCk~~~g~~rG 26 (37)
T d2crda_ 14 WSVCQRLHNTSRG 26 (37)
T ss_dssp HHHHHHHSSCCCE
T ss_pred hHHHHHHhCCCcc
Confidence 6778889998763
No 7
>d1puza_ a.218.1.1 (A:) Hypothetical protein NMA1147 {Neisseria meningitidis, mc58 [TaxId: 487]}
Probab=6.55 E-value=83 Score=16.82 Aligned_cols=12 Identities=8% Similarity=0.124 Sum_probs=5.8
Q ss_pred hhhhhhcCcCCC
Q 036463 106 SICDRLLGTHMS 117 (119)
Q Consensus 106 ~~wD~lfGT~~~ 117 (119)
.+||++.|...+
T Consensus 56 dL~~wl~g~~~~ 67 (82)
T d1puza_ 56 ELLALINGHSET 67 (82)
T ss_dssp HHHHHHHTCSCC
T ss_pred HHHHHHhCCCCC
Confidence 345555554443
No 8
>d2ftxb1 d.300.1.2 (B:155-213) Kinetochore protein Spc24 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.69 E-value=71 Score=16.42 Aligned_cols=14 Identities=43% Similarity=0.612 Sum_probs=8.0
Q ss_pred ccCCCCCc---hhhhhhc
Q 036463 98 YNYSQPFF---SICDRLL 112 (119)
Q Consensus 98 ~Nyg~~~~---~~wD~lf 112 (119)
.+|+. +| -+||||-
T Consensus 42 ~k~S~-fF~tnYiWd~L~ 58 (59)
T d2ftxb1 42 NNLSD-FYKTKYIWERLG 58 (59)
T ss_dssp TTSCH-HHHHHHHHHHHT
T ss_pred CcccH-HHHHHHHHHHhc
Confidence 35652 44 3788873
No 9
>g1sse.1 g.78.1.1 (A:,B:) YAP1 redox domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.57 E-value=92 Score=18.33 Aligned_cols=8 Identities=38% Similarity=0.472 Sum_probs=6.4
Q ss_pred chhhhhhc
Q 036463 105 FSICDRLL 112 (119)
Q Consensus 105 ~~~wD~lf 112 (119)
..+||||=
T Consensus 70 s~IWdri~ 77 (121)
T g1sse.1 70 SEIWDRIT 77 (121)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 67999983
No 10
>d1r11a3 d.75.1.1 (A:3-60) Dimeric tRNA splicing endonuclease, domains 1 and 3 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=4.45 E-value=1.9e+02 Score=13.95 Aligned_cols=13 Identities=46% Similarity=0.815 Sum_probs=9.9
Q ss_pred ccccChHHHHHHH
Q 036463 21 ALYNHPLEGLLLD 33 (119)
Q Consensus 21 ~~~~hp~e~ll~~ 33 (119)
-.+.||+|.+..+
T Consensus 25 kiylhplevvylq 37 (58)
T d1r11a3 25 KIYLHPLEVVYLQ 37 (58)
T ss_dssp EEEECHHHHHHHH
T ss_pred EEEeeeeeEEEEE
Confidence 3578999988765
Done!